DU202_00001 SM00382 ATPases associated with a variety of cellular activities DU202_00004 SM00387 Histidine kinase-like ATPases DU202_00004 SM00433 TopoisomeraseII DU202_00006 SM00480 DNA polymerase III beta subunit DU202_00007 SM00382 ATPases associated with a variety of cellular activities DU202_00007 SM00760 Bacterial dnaA protein helix-turn-helix domain DU202_00010 SM01234 DU202_00010 DU202_00024 SM00014 Acid phosphatase homologues DU202_00028 SM01001 AIR carboxylase DU202_00032 SM00235 Zinc-dependent metalloprotease DU202_00033 SM00235 Zinc-dependent metalloprotease DU202_00037 SM00849 Metallo-beta-lactamase superfamily DU202_00047 SM00248 ankyrin repeats DU202_00052 SM00904 Riboflavin kinase DU202_00056 SM00382 ATPases associated with a variety of cellular activities DU202_00059 SM00062 Bacterial periplasmic substrate-binding proteins DU202_00060 SM00062 Bacterial periplasmic substrate-binding proteins DU202_00076 SM00644 DU202_00076 DU202_00081 SM00226 Low molecular weight phosphatase family DU202_00083 SM00984 UDP binding domain DU202_00089 SM00858 DU202_00089 DU202_00097 SM00984 UDP binding domain DU202_00102 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_00102 SM00895 DU202_00102 DU202_00106 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_00106 SM00895 DU202_00106 DU202_00118 SM00825 Beta-ketoacyl synthase DU202_00126 SM00344 helix_turn_helix ASNC type DU202_00128 SM01005 Alanine racemase, C-terminal domain DU202_00145 SM00421 helix_turn_helix, Lux Regulon DU202_00148 SM00823 Phosphopantetheine attachment site DU202_00148 SM01294 DU202_00148 DU202_00149 SM00823 Phosphopantetheine attachment site DU202_00149 SM00824 Thioesterase DU202_00175 SM00836 DALR anticodon binding domain DU202_00175 SM01016 Arginyl tRNA synthetase N terminal dom DU202_00176 SM00919 Malic enzyme, NAD binding domain DU202_00176 SM01274 DU202_00176 DU202_00181 SM00382 ATPases associated with a variety of cellular activities DU202_00191 SM00382 ATPases associated with a variety of cellular activities DU202_00195 SM00342 helix_turn_helix, arabinose operon control protein DU202_00220 SM00422 helix_turn_helix, mercury resistance DU202_00222 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_00226 SM00641 Glycosyl hydrolases family 25 DU202_00229 SM01091 Transporter associated domain DU202_00233 SM00434 DNA Topoisomerase IV DU202_00241 SM01130 DU202_00241 DU202_00242 SM01007 Class II Aldolase and Adducin N-terminal domain DU202_00243 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_00247 SM00382 ATPases associated with a variety of cellular activities DU202_00263 SM00938 Nitrogen regulatory protein P-II DU202_00276 SM00245 tail specific protease DU202_00277 SM00382 ATPases associated with a variety of cellular activities DU202_00277 SM00448 cheY-homologous receiver domain DU202_00278 SM00387 Histidine kinase-like ATPases DU202_00278 SM00388 His Kinase A (phosphoacceptor) domain DU202_00279 SM00421 helix_turn_helix, Lux Regulon DU202_00279 SM00448 cheY-homologous receiver domain DU202_00286 SM00899 DU202_00286 DU202_00304 SM00448 cheY-homologous receiver domain DU202_00304 SM00850 LytTr DNA-binding domain DU202_00310 SM00528 Domain in histone-like proteins of HNS family DU202_00312 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DU202_00314 SM00240 Forkhead associated domain DU202_00324 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DU202_00324 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DU202_00325 SM00649 Ribosomal protein L11/L12 DU202_00330 SM00663 RNA polymerase I subunit A N-terminus DU202_00338 SM00387 Histidine kinase-like ATPases DU202_00343 SM00422 helix_turn_helix, mercury resistance DU202_00353 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DU202_00353 SM00465 GIY-YIG type nucleases (URI domain) DU202_00356 SM00342 helix_turn_helix, arabinose operon control protein DU202_00358 SM00346 helix_turn_helix isocitrate lyase regulation DU202_00362 SM00732 Likely ribonuclease with RNase H fold. DU202_00367 SM00967 RNA 2'-O ribose methyltransferase substrate binding DU202_00379 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_00400 SM00382 ATPases associated with a variety of cellular activities DU202_00402 SM01387 DU202_00402 DU202_00403 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_00403 SM00322 K homology RNA-binding domain DU202_00406 SM00271 DnaJ molecular chaperone homology domain DU202_00410 SM00487 DEAD-like helicases superfamily DU202_00410 SM00490 helicase superfamily c-terminal domain DU202_00418 SM00116 Domain in cystathionine beta-synthase and other proteins. DU202_00418 SM01091 Transporter associated domain DU202_00425 SM00849 Metallo-beta-lactamase superfamily DU202_00441 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_00447 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_00448 SM00363 S4 RNA-binding domain DU202_00457 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DU202_00467 SM01329 DU202_00467 DU202_00470 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_00471 SM00342 helix_turn_helix, arabinose operon control protein DU202_00473 SM00870 DU202_00473 DU202_00476 SM00859 Semialdehyde dehydrogenase, NAD binding domain DU202_00482 SM00382 ATPases associated with a variety of cellular activities DU202_00484 SM00829 Enoylreductase DU202_00487 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DU202_00487 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DU202_00487 SM00493 DU202_00487 DU202_00491 SM00360 RNA recognition motif DU202_00519 SM00671 Sel1-like repeats. DU202_00522 SM00917 LeuA allosteric (dimerisation) domain DU202_00523 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DU202_00527 SM00382 ATPases associated with a variety of cellular activities DU202_00527 SM00994 ClpX C4-type zinc finger DU202_00527 SM01086 C-terminal, D2-small domain, of ClpB protein DU202_00542 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DU202_00542 SM00245 tail specific protease DU202_00544 SM00014 Acid phosphatase homologues DU202_00546 SM00562 DU202_00546 DU202_00548 SM00028 Tetratricopeptide repeats DU202_00553 SM00564 beta-propeller repeat DU202_00556 SM00563 Phosphate acyltransferases DU202_00569 SM00825 Beta-ketoacyl synthase DU202_00571 SM00822 DU202_00571 DU202_00572 SM00825 Beta-ketoacyl synthase DU202_00577 SM00450 Rhodanese Homology Domain DU202_00579 SM00479 DU202_00579 DU202_00583 SM00382 ATPases associated with a variety of cellular activities DU202_00593 SM00052 Putative diguanylate phosphodiesterase DU202_00593 SM00267 diguanylate cyclase DU202_00597 SM01236 DU202_00597 DU202_00613 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DU202_00613 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DU202_00621 SM00073 Histidine Phosphotransfer domain DU202_00621 SM00387 Histidine kinase-like ATPases DU202_00621 SM00388 His Kinase A (phosphoacceptor) domain DU202_00621 SM00448 cheY-homologous receiver domain DU202_00625 SM00954 Region found in RelA / SpoT proteins DU202_00628 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DU202_00638 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DU202_00649 SM00873 B3/4 domain DU202_00649 SM00874 tRNA synthetase B5 domain DU202_00649 SM00896 Ferredoxin-fold anticodon binding domain DU202_00650 SM00411 bacterial (prokaryotic) histone like domain DU202_00652 SM00357 Cold shock protein domain DU202_00652 SM00382 ATPases associated with a variety of cellular activities DU202_00652 SM00959 Rho termination factor, N-terminal domain DU202_00656 SM00977 TilS substrate C-terminal domain DU202_00659 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DU202_00659 SM00474 3'-5' exonuclease DU202_00659 SM00475 5'-3' exonuclease DU202_00659 SM00482 DNA polymerase A domain DU202_00663 SM00382 ATPases associated with a variety of cellular activities DU202_00665 SM00347 helix_turn_helix multiple antibiotic resistance protein DU202_00669 SM00331 Sigma factor PP2C-like phosphatases DU202_00732 SM00342 helix_turn_helix, arabinose operon control protein DU202_00738 SM00903 Flavin reductase like domain DU202_00748 SM00564 beta-propeller repeat DU202_00769 SM00387 Histidine kinase-like ATPases DU202_00775 SM00448 cheY-homologous receiver domain DU202_00775 SM00862 Transcriptional regulatory protein, C terminal DU202_00776 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DU202_00776 SM00387 Histidine kinase-like ATPases DU202_00776 SM00388 His Kinase A (phosphoacceptor) domain DU202_00778 SM00267 diguanylate cyclase DU202_00783 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DU202_00784 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DU202_00784 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DU202_00793 SM00357 Cold shock protein domain DU202_00821 SM00382 ATPases associated with a variety of cellular activities DU202_00821 SM00962 SRP54-type protein, GTPase domain DU202_00821 SM00963 SRP54-type protein, helical bundle domain DU202_00826 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_00828 SM00771 ZipA, C-terminal domain (FtsZ-binding) DU202_00829 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DU202_00829 SM00292 breast cancer carboxy-terminal domain DU202_00829 SM00532 Ligase N family DU202_00840 SM00363 S4 RNA-binding domain DU202_00847 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DU202_00848 SM00822 DU202_00848 DU202_00850 SM00257 Lysin motif DU202_00859 SM01400 DU202_00859 DU202_00865 SM00028 Tetratricopeptide repeats DU202_00867 SM00400 zinc finger DU202_00867 SM00493 DU202_00867 DU202_00869 SM00363 S4 RNA-binding domain DU202_00878 SM01329 DU202_00878 DU202_00891 SM00825 Beta-ketoacyl synthase DU202_00895 SM00838 Elongation factor G C-terminus DU202_00895 SM00889 Elongation factor G, domain IV DU202_00903 SM00843 DU202_00903 DU202_00912 SM00563 Phosphate acyltransferases DU202_00928 SM00382 ATPases associated with a variety of cellular activities DU202_00937 SM01004 Delta-aminolevulinic acid dehydratase DU202_00950 SM00479 DU202_00950 DU202_00957 SM00530 Helix-turn-helix XRE-family like proteins DU202_00973 SM00382 ATPases associated with a variety of cellular activities DU202_00983 SM00530 Helix-turn-helix XRE-family like proteins DU202_01031 SM00530 Helix-turn-helix XRE-family like proteins DU202_01046 SM00382 ATPases associated with a variety of cellular activities DU202_01055 SM01130 DU202_01055 DU202_01076 SM01322 DU202_01076 DU202_01085 SM00346 helix_turn_helix isocitrate lyase regulation DU202_01089 SM00822 DU202_01089 DU202_01103 SM00342 helix_turn_helix, arabinose operon control protein DU202_01108 SM00822 DU202_01108 DU202_01111 SM00861 Transketolase, pyrimidine binding domain DU202_01112 SM01018 B12 binding domain DU202_01125 SM00947 Carbonic anhydrase DU202_01127 SM00382 ATPases associated with a variety of cellular activities DU202_01147 SM01091 Transporter associated domain DU202_01157 SM00988 UreE urease accessory protein, N-terminal domain DU202_01166 SM00478 endonuclease III DU202_01168 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DU202_01172 SM00382 ATPases associated with a variety of cellular activities DU202_01172 SM00464 Found in ATP-dependent protease La (LON) DU202_01195 SM00530 Helix-turn-helix XRE-family like proteins DU202_01232 SM00287 Bacterial SH3 domain homologues DU202_01238 SM00530 Helix-turn-helix XRE-family like proteins DU202_01259 SM01011 Aminopeptidase P, N-terminal domain DU202_01263 SM00422 helix_turn_helix, mercury resistance DU202_01274 SM00479 DU202_01274 DU202_01275 SM00257 Lysin motif DU202_01279 SM00382 ATPases associated with a variety of cellular activities DU202_01283 SM00479 DU202_01283 DU202_01285 SM00267 diguanylate cyclase DU202_01323 SM00487 DEAD-like helicases superfamily DU202_01328 SM00487 DEAD-like helicases superfamily DU202_01328 SM00490 helicase superfamily c-terminal domain DU202_01330 SM00506 Appr-1"-p processing enzyme DU202_01337 SM00422 helix_turn_helix, mercury resistance DU202_01339 SM00382 ATPases associated with a variety of cellular activities DU202_01353 SM00857 Resolvase, N terminal domain DU202_01360 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DU202_01361 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DU202_01363 SM00788 Adenylosuccinate synthetase DU202_01367 SM00100 Cyclic nucleotide-monophosphate binding domain DU202_01367 SM00419 helix_turn_helix, cAMP Regulatory protein DU202_01371 SM00382 ATPases associated with a variety of cellular activities DU202_01371 SM01086 C-terminal, D2-small domain, of ClpB protein DU202_01374 SM00981 DU202_01374 DU202_01390 SM00382 ATPases associated with a variety of cellular activities DU202_01390 SM00487 DEAD-like helicases superfamily DU202_01390 SM00490 helicase superfamily c-terminal domain DU202_01390 SM00847 Helicase associated domain (HA2) Add an annotation DU202_01402 SM00422 helix_turn_helix, mercury resistance DU202_01415 SM00530 Helix-turn-helix XRE-family like proteins DU202_01420 SM00357 Cold shock protein domain DU202_01438 SM00840 DU202_01438 DU202_01439 SM00116 Domain in cystathionine beta-synthase and other proteins. DU202_01443 SM00382 ATPases associated with a variety of cellular activities DU202_01445 SM00382 ATPases associated with a variety of cellular activities DU202_01454 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DU202_01454 SM00534 ATPase domain of DNA mismatch repair MUTS family DU202_01455 SM00344 helix_turn_helix ASNC type DU202_01457 SM00052 Putative diguanylate phosphodiesterase DU202_01462 SM00422 helix_turn_helix, mercury resistance DU202_01480 SM00796 Allophanate hydrolase subunit 1 DU202_01480 SM00797 Allophanate hydrolase subunit 2 DU202_01481 SM00878 Biotin carboxylase C-terminal domain DU202_01483 SM00671 Sel1-like repeats. DU202_01489 SM00829 Enoylreductase DU202_01492 SM00796 Allophanate hydrolase subunit 1 DU202_01492 SM00797 Allophanate hydrolase subunit 2 DU202_01492 SM00878 Biotin carboxylase C-terminal domain DU202_01501 SM00382 ATPases associated with a variety of cellular activities DU202_01522 SM00382 ATPases associated with a variety of cellular activities DU202_01522 SM01086 C-terminal, D2-small domain, of ClpB protein DU202_01529 SM00248 ankyrin repeats DU202_01536 SM00422 helix_turn_helix, mercury resistance DU202_01539 SM01130 DU202_01539 DU202_01541 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_01541 SM00895 DU202_01541 DU202_01546 SM00342 helix_turn_helix, arabinose operon control protein DU202_01571 SM01060 DU202_01571 DU202_01574 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_01574 SM00895 DU202_01574 DU202_01577 SM00903 Flavin reductase like domain DU202_01586 SM00346 helix_turn_helix isocitrate lyase regulation DU202_01588 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_01588 SM00866 DU202_01588 DU202_01590 SM00382 ATPases associated with a variety of cellular activities DU202_01601 SM00346 helix_turn_helix isocitrate lyase regulation DU202_01605 SM00346 helix_turn_helix isocitrate lyase regulation DU202_01612 SM00882 Coenzyme A transferase DU202_01613 SM00882 Coenzyme A transferase DU202_01623 SM00878 Biotin carboxylase C-terminal domain DU202_01643 SM01236 DU202_01643 DU202_01645 SM01060 DU202_01645 DU202_01650 SM00384 DNA binding domain with preference for A/T rich regions DU202_01654 SM00344 helix_turn_helix ASNC type DU202_01658 SM00387 Histidine kinase-like ATPases DU202_01658 SM00388 His Kinase A (phosphoacceptor) domain DU202_01658 SM00448 cheY-homologous receiver domain DU202_01659 SM00421 helix_turn_helix, Lux Regulon DU202_01659 SM00448 cheY-homologous receiver domain DU202_01663 SM00382 ATPases associated with a variety of cellular activities DU202_01664 SM00062 Bacterial periplasmic substrate-binding proteins DU202_01665 SM00062 Bacterial periplasmic substrate-binding proteins DU202_01671 SM00450 Rhodanese Homology Domain DU202_01672 SM00822 DU202_01672 DU202_01679 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_01689 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DU202_01693 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_01705 SM00062 Bacterial periplasmic substrate-binding proteins DU202_01708 SM00382 ATPases associated with a variety of cellular activities DU202_01713 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_01713 SM00895 DU202_01713 DU202_01721 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DU202_01731 SM00481 DNA polymerase alpha chain like domain DU202_01732 SM00870 DU202_01732 DU202_01737 SM00342 helix_turn_helix, arabinose operon control protein DU202_01740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DU202_01748 SM00100 Cyclic nucleotide-monophosphate binding domain DU202_01748 SM00419 helix_turn_helix, cAMP Regulatory protein DU202_01752 SM00382 ATPases associated with a variety of cellular activities DU202_01752 SM00930 DU202_01752 DU202_01760 SM00062 Bacterial periplasmic substrate-binding proteins DU202_01764 SM00382 ATPases associated with a variety of cellular activities DU202_01766 SM00344 helix_turn_helix ASNC type DU202_01768 SM00563 Phosphate acyltransferases DU202_01772 SM01236 DU202_01772 DU202_01793 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_01793 SM00876 Biotin and Thiamin Synthesis associated domain DU202_01797 SM00530 Helix-turn-helix XRE-family like proteins DU202_01804 SM00861 Transketolase, pyrimidine binding domain DU202_01806 SM00867 YceI-like domain DU202_01813 SM00344 helix_turn_helix ASNC type DU202_01818 SM00342 helix_turn_helix, arabinose operon control protein DU202_01820 SM00382 ATPases associated with a variety of cellular activities DU202_01824 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DU202_01826 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DU202_01838 SM00470 ParB-like nuclease domain DU202_01841 SM00382 ATPases associated with a variety of cellular activities DU202_01853 SM00986 Uracil DNA glycosylase superfamily DU202_01853 SM00987 UreE urease accessory protein, C-terminal domain DU202_01858 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_01859 SM00411 bacterial (prokaryotic) histone like domain DU202_01861 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DU202_01865 SM00342 helix_turn_helix, arabinose operon control protein DU202_01880 SM00382 ATPases associated with a variety of cellular activities DU202_01914 SM00232 JAB/MPN domain DU202_01936 SM00382 ATPases associated with a variety of cellular activities DU202_01947 SM00487 DEAD-like helicases superfamily DU202_01947 SM00490 helicase superfamily c-terminal domain DU202_01947 SM00982 DU202_01947 DU202_01947 SM01058 CarD-like/TRCF domain DU202_01949 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain DU202_01952 SM00271 DnaJ molecular chaperone homology domain DU202_01959 SM00411 bacterial (prokaryotic) histone like domain DU202_01961 SM00342 helix_turn_helix, arabinose operon control protein DU202_01979 SM01006 Siderophore biosynthesis protein domain DU202_01984 SM00855 Phosphoglycerate mutase family DU202_01998 SM00382 ATPases associated with a variety of cellular activities DU202_02006 SM01324 DU202_02006 DU202_02016 SM00493 DU202_02016 DU202_02017 SM00341 Helicase and RNase D C-terminal DU202_02017 SM00474 3'-5' exonuclease DU202_02023 SM00382 ATPases associated with a variety of cellular activities DU202_02028 SM00267 diguanylate cyclase DU202_02031 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_02033 SM00861 Transketolase, pyrimidine binding domain DU202_02037 SM00829 Enoylreductase DU202_02039 SM00382 ATPases associated with a variety of cellular activities DU202_02040 SM00849 Metallo-beta-lactamase superfamily DU202_02045 SM00342 helix_turn_helix, arabinose operon control protein DU202_02049 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_02049 SM00866 DU202_02049 DU202_02054 SM00382 ATPases associated with a variety of cellular activities DU202_02055 SM00567 E-Z type HEAT repeats DU202_02070 SM00882 Coenzyme A transferase DU202_02071 SM00882 Coenzyme A transferase DU202_02076 SM00342 helix_turn_helix, arabinose operon control protein DU202_02081 SM00903 Flavin reductase like domain DU202_02083 SM00342 helix_turn_helix, arabinose operon control protein DU202_02090 SM00382 ATPases associated with a variety of cellular activities DU202_02099 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_02104 SM00155 Phospholipase D. Active site motifs. DU202_02109 SM00829 Enoylreductase DU202_02129 SM00448 cheY-homologous receiver domain DU202_02129 SM00862 Transcriptional regulatory protein, C terminal DU202_02130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DU202_02130 SM00387 Histidine kinase-like ATPases DU202_02130 SM00388 His Kinase A (phosphoacceptor) domain DU202_02132 SM00342 helix_turn_helix, arabinose operon control protein DU202_02134 SM00822 DU202_02134 DU202_02135 SM00822 DU202_02135 DU202_02190 SM00530 Helix-turn-helix XRE-family like proteins DU202_02193 SM00346 helix_turn_helix isocitrate lyase regulation DU202_02196 SM00382 ATPases associated with a variety of cellular activities DU202_02202 SM00411 bacterial (prokaryotic) histone like domain DU202_02209 SM00421 helix_turn_helix, Lux Regulon DU202_02228 SM01400 DU202_02228 DU202_02230 SM00342 helix_turn_helix, arabinose operon control protein DU202_02232 SM00382 ATPases associated with a variety of cellular activities DU202_02236 SM00829 Enoylreductase DU202_02239 SM00342 helix_turn_helix, arabinose operon control protein DU202_02260 SM00346 helix_turn_helix isocitrate lyase regulation DU202_02266 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_02266 SM00866 DU202_02266 DU202_02278 SM00912 haemagglutination activity domain DU202_02293 SM00422 helix_turn_helix, mercury resistance DU202_02299 SM00347 helix_turn_helix multiple antibiotic resistance protein DU202_02303 SM01060 DU202_02303 DU202_02307 SM00829 Enoylreductase DU202_02311 SM00091 PAS domain DU202_02311 SM00382 ATPases associated with a variety of cellular activities DU202_02314 SM00855 Phosphoglycerate mutase family DU202_02321 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_02321 SM00895 DU202_02321 DU202_02324 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DU202_02327 SM00882 Coenzyme A transferase DU202_02328 SM00882 Coenzyme A transferase DU202_02335 SM00342 helix_turn_helix, arabinose operon control protein DU202_02336 SM00903 Flavin reductase like domain DU202_02345 SM00347 helix_turn_helix multiple antibiotic resistance protein DU202_02349 SM00855 Phosphoglycerate mutase family DU202_02353 SM00346 helix_turn_helix isocitrate lyase regulation DU202_02354 SM00849 Metallo-beta-lactamase superfamily DU202_02358 SM00564 beta-propeller repeat DU202_02360 SM00710 Parallel beta-helix repeats DU202_02367 SM00998 Adenylosuccinate lyase C-terminus DU202_02369 SM00882 Coenzyme A transferase DU202_02370 SM00882 Coenzyme A transferase DU202_02374 SM01192 DU202_02374 DU202_02374 SM01193 DU202_02374 DU202_02387 SM00382 ATPases associated with a variety of cellular activities DU202_02387 SM01086 C-terminal, D2-small domain, of ClpB protein DU202_02390 SM00859 Semialdehyde dehydrogenase, NAD binding domain DU202_02398 SM01264 DU202_02398 DU202_02413 SM00382 ATPases associated with a variety of cellular activities DU202_02413 SM00962 SRP54-type protein, GTPase domain DU202_02413 SM00963 SRP54-type protein, helical bundle domain DU202_02418 SM00116 Domain in cystathionine beta-synthase and other proteins. DU202_02434 SM00347 helix_turn_helix multiple antibiotic resistance protein DU202_02436 SM00052 Putative diguanylate phosphodiesterase DU202_02436 SM00091 PAS domain DU202_02436 SM00267 diguanylate cyclase DU202_02446 SM00344 helix_turn_helix ASNC type DU202_02452 SM00363 S4 RNA-binding domain DU202_02453 SM00382 ATPases associated with a variety of cellular activities DU202_02459 SM00935 Outer membrane protein (OmpH-like) DU202_02461 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DU202_02467 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_02468 SM00091 PAS domain DU202_02468 SM00387 Histidine kinase-like ATPases DU202_02468 SM00388 His Kinase A (phosphoacceptor) domain DU202_02469 SM00382 ATPases associated with a variety of cellular activities DU202_02469 SM00448 cheY-homologous receiver domain DU202_02488 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_02490 SM00852 Probable molybdopterin binding domain DU202_02491 SM00852 Probable molybdopterin binding domain DU202_02494 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_02495 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DU202_02497 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DU202_02501 SM00448 cheY-homologous receiver domain DU202_02501 SM01012 DU202_02501 DU202_02506 SM00878 Biotin carboxylase C-terminal domain DU202_02514 SM01040 BRO family, N-terminal domain DU202_02540 SM00287 Bacterial SH3 domain homologues DU202_02574 SM00530 Helix-turn-helix XRE-family like proteins DU202_02586 SM00530 Helix-turn-helix XRE-family like proteins DU202_02588 SM01236 DU202_02588 DU202_02595 SM00226 Low molecular weight phosphatase family DU202_02601 SM00382 ATPases associated with a variety of cellular activities DU202_02606 SM00822 DU202_02606 DU202_02612 SM00344 helix_turn_helix ASNC type DU202_02615 SM00831 Cation transporter/ATPase, N-terminus DU202_02621 SM00382 ATPases associated with a variety of cellular activities DU202_02637 SM00344 helix_turn_helix ASNC type DU202_02638 SM00830 Chorismate mutase type II DU202_02646 SM00342 helix_turn_helix, arabinose operon control protein DU202_02646 SM00871 Bacterial transcription activator, effector binding domain DU202_02648 SM00382 ATPases associated with a variety of cellular activities DU202_02651 SM00862 Transcriptional regulatory protein, C terminal DU202_02665 SM00853 MutL C terminal dimerisation domain DU202_02665 SM01340 DU202_02665 DU202_02670 SM00363 S4 RNA-binding domain DU202_02686 SM01230 DU202_02686 DU202_02687 SM00448 cheY-homologous receiver domain DU202_02687 SM00862 Transcriptional regulatory protein, C terminal DU202_02688 SM00387 Histidine kinase-like ATPases DU202_02688 SM00388 His Kinase A (phosphoacceptor) domain DU202_02693 SM00905 Dihydroneopterin aldolase DU202_02696 SM00903 Flavin reductase like domain DU202_02699 SM00822 DU202_02699 DU202_02700 SM00342 helix_turn_helix, arabinose operon control protein DU202_02701 SM00062 Bacterial periplasmic substrate-binding proteins DU202_02704 SM00937 DU202_02704 DU202_02729 SM01005 Alanine racemase, C-terminal domain DU202_02731 SM00460 Transglutaminase/protease-like homologues DU202_02735 SM01228 DU202_02735 DU202_02740 SM00798 AICARFT/IMPCHase bienzyme DU202_02740 SM00851 MGS-like domain DU202_02741 SM01209 DU202_02741 DU202_02741 SM01210 DU202_02741 DU202_02743 SM00382 ATPases associated with a variety of cellular activities DU202_02743 SM00930 DU202_02743 DU202_02745 SM00849 Metallo-beta-lactamase superfamily DU202_02758 SM00382 ATPases associated with a variety of cellular activities DU202_02788 SM00972 Spore Coat Protein U domain DU202_02793 SM00972 Spore Coat Protein U domain DU202_02804 SM00220 Serine/Threonine protein kinases, catalytic domain DU202_02848 SM00507 HNH nucleases DU202_02872 SM00855 Phosphoglycerate mutase family DU202_02876 SM00487 DEAD-like helicases superfamily DU202_02876 SM00490 helicase superfamily c-terminal domain DU202_02877 SM00357 Cold shock protein domain DU202_02890 SM00830 Chorismate mutase type II DU202_02901 SM00387 Histidine kinase-like ATPases DU202_02901 SM00388 His Kinase A (phosphoacceptor) domain DU202_02902 SM00448 cheY-homologous receiver domain DU202_02902 SM00862 Transcriptional regulatory protein, C terminal DU202_02904 SM00382 ATPases associated with a variety of cellular activities DU202_02909 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_02913 SM00382 ATPases associated with a variety of cellular activities DU202_02916 SM00062 Bacterial periplasmic substrate-binding proteins DU202_02925 SM00479 DU202_02925 DU202_02928 SM00382 ATPases associated with a variety of cellular activities DU202_02938 SM00342 helix_turn_helix, arabinose operon control protein DU202_02948 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_02952 SM00996 S-adenosyl-L-homocysteine hydrolase DU202_02952 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DU202_02955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DU202_02957 SM00052 Putative diguanylate phosphodiesterase DU202_02957 SM00267 diguanylate cyclase DU202_02958 SM00919 Malic enzyme, NAD binding domain DU202_02958 SM01274 DU202_02958 DU202_02960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DU202_02971 SM01230 DU202_02971 DU202_02987 SM01252 DU202_02987 DU202_02992 SM00530 Helix-turn-helix XRE-family like proteins DU202_03022 SM00382 ATPases associated with a variety of cellular activities DU202_03029 SM00530 Helix-turn-helix XRE-family like proteins DU202_03052 SM00463 Small MutS-related domain DU202_03054 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DU202_03055 SM01092 CO dehydrogenase flavoprotein C-terminal domain DU202_03069 SM00382 ATPases associated with a variety of cellular activities DU202_03070 SM00382 ATPases associated with a variety of cellular activities DU202_03079 SM00382 ATPases associated with a variety of cellular activities DU202_03093 SM00829 Enoylreductase DU202_03094 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DU202_03123 SM00841 Elongation factor P, C-terminal DU202_03123 SM01185 DU202_03123 DU202_03126 SM00052 Putative diguanylate phosphodiesterase DU202_03133 SM00257 Lysin motif DU202_03137 SM00936 Penicillin-binding protein 5, C-terminal domain DU202_03146 SM00382 ATPases associated with a variety of cellular activities DU202_03152 SM00344 helix_turn_helix ASNC type DU202_03163 SM00487 DEAD-like helicases superfamily DU202_03163 SM00490 helicase superfamily c-terminal domain DU202_03169 SM00880 DU202_03169 DU202_03169 SM01118 DU202_03169 DU202_03179 SM01329 DU202_03179 DU202_03199 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DU202_03203 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DU202_03206 SM00487 DEAD-like helicases superfamily DU202_03206 SM00490 helicase superfamily c-terminal domain DU202_03208 SM00267 diguanylate cyclase DU202_03221 SM00358 Double-stranded RNA binding motif DU202_03221 SM00535 Ribonuclease III family DU202_03224 SM00838 Elongation factor G C-terminus DU202_03226 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DU202_03236 SM00382 ATPases associated with a variety of cellular activities DU202_03251 SM01211 DU202_03251 DU202_03252 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DU202_03253 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DU202_03254 SM00382 ATPases associated with a variety of cellular activities DU202_03277 SM00849 Metallo-beta-lactamase superfamily DU202_03278 SM00382 ATPases associated with a variety of cellular activities DU202_03293 SM00434 DNA Topoisomerase IV DU202_03294 SM00893 Electron transfer flavoprotein domain DU202_03295 SM00893 Electron transfer flavoprotein domain DU202_03302 SM00382 ATPases associated with a variety of cellular activities DU202_03303 SM00978 DU202_03303 DU202_03327 SM00849 Metallo-beta-lactamase superfamily DU202_03330 SM00883 Chaperonin 10 Kd subunit DU202_03338 SM00046 Diacylglycerol kinase catalytic domain (presumed) DU202_03353 SM00382 ATPases associated with a variety of cellular activities DU202_03355 SM01103 DU202_03355 DU202_03358 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DU202_03359 SM00851 MGS-like domain DU202_03359 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DU202_03365 SM00854 Bacterial capsule synthesis protein PGA_cap DU202_03374 SM00881 CoA binding domain DU202_03378 SM00861 Transketolase, pyrimidine binding domain DU202_03385 SM00450 Rhodanese Homology Domain DU202_03417 SM00822 DU202_03417 DU202_03426 SM00387 Histidine kinase-like ATPases DU202_03426 SM00388 His Kinase A (phosphoacceptor) domain DU202_03427 SM00448 cheY-homologous receiver domain DU202_03427 SM00862 Transcriptional regulatory protein, C terminal DU202_03431 SM00563 Phosphate acyltransferases DU202_03434 SM00244 prohibitin homologues DU202_03441 SM00829 Enoylreductase DU202_03442 SM00342 helix_turn_helix, arabinose operon control protein DU202_03448 SM00342 helix_turn_helix, arabinose operon control protein DU202_03457 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_03464 SM00845 GatB domain DU202_03495 SM00073 Histidine Phosphotransfer domain DU202_03495 SM00260 Two component signalling adaptor domain DU202_03495 SM00387 Histidine kinase-like ATPases DU202_03495 SM00448 cheY-homologous receiver domain DU202_03495 SM01231 DU202_03495 DU202_03496 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DU202_03497 SM00260 Two component signalling adaptor domain DU202_03498 SM00448 cheY-homologous receiver domain DU202_03499 SM00448 cheY-homologous receiver domain DU202_03510 SM00671 Sel1-like repeats. DU202_03515 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DU202_03515 SM01232 DU202_03515 DU202_03519 SM00838 Elongation factor G C-terminus DU202_03533 SM00564 beta-propeller repeat DU202_03536 SM00342 helix_turn_helix, arabinose operon control protein DU202_03547 SM00957 SecA DEAD-like domain DU202_03547 SM00958 SecA preprotein cross-linking domain DU202_03549 SM00849 Metallo-beta-lactamase superfamily DU202_03555 SM00342 helix_turn_helix, arabinose operon control protein DU202_03567 SM00448 cheY-homologous receiver domain DU202_03567 SM00862 Transcriptional regulatory protein, C terminal DU202_03568 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DU202_03568 SM00387 Histidine kinase-like ATPases DU202_03568 SM00388 His Kinase A (phosphoacceptor) domain DU202_03595 SM00387 Histidine kinase-like ATPases DU202_03595 SM00388 His Kinase A (phosphoacceptor) domain DU202_03607 SM01323 DU202_03607 DU202_03613 SM00481 DNA polymerase alpha chain like domain DU202_03618 SM00450 Rhodanese Homology Domain DU202_03633 SM00267 diguanylate cyclase DU202_03636 SM00155 Phospholipase D. Active site motifs. DU202_03637 SM00563 Phosphate acyltransferases DU202_03643 SM00650 Ribosomal RNA adenine dimethylases DU202_03650 SM00878 Biotin carboxylase C-terminal domain DU202_03668 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DU202_03674 SM00729 Elongator protein 3, MiaB family, Radical SAM DU202_03684 SM00342 helix_turn_helix, arabinose operon control protein DU202_03694 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_03694 SM00955 DU202_03694 DU202_03707 SM00662 RNA polymerases D DU202_03708 SM00363 S4 RNA-binding domain DU202_03708 SM01390 DU202_03708 DU202_03721 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DU202_03722 SM01374 DU202_03722 DU202_03726 SM00322 K homology RNA-binding domain DU202_03729 SM01382 DU202_03729 DU202_03729 SM01383 DU202_03729 DU202_03733 SM01403 DU202_03733 DU202_03743 SM00563 Phosphate acyltransferases DU202_03746 SM00487 DEAD-like helicases superfamily DU202_03746 SM00490 helicase superfamily c-terminal domain DU202_03755 SM00382 ATPases associated with a variety of cellular activities DU202_03757 SM00487 DEAD-like helicases superfamily DU202_03757 SM00490 helicase superfamily c-terminal domain DU202_03759 SM00861 Transketolase, pyrimidine binding domain DU202_03767 SM00116 Domain in cystathionine beta-synthase and other proteins. DU202_03787 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DU202_03825 SM00072 Guanylate kinase homologues. DU202_03826 SM01409 DU202_03826 DU202_03827 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DU202_03827 SM00954 Region found in RelA / SpoT proteins DU202_03843 SM00965 Secretin and TonB N terminus short domain DU202_03847 SM00842 Cell division protein FtsA DU202_03874 SM00671 Sel1-like repeats. DU202_03875 SM00382 ATPases associated with a variety of cellular activities DU202_03878 SM00947 Carbonic anhydrase DU202_03879 SM00316 Ribosomal protein S1-like RNA-binding domain DU202_03879 SM00732 Likely ribonuclease with RNase H fold. DU202_03880 SM00448 cheY-homologous receiver domain DU202_03880 SM00862 Transcriptional regulatory protein, C terminal DU202_03881 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DU202_03881 SM00387 Histidine kinase-like ATPases DU202_03881 SM00388 His Kinase A (phosphoacceptor) domain DU202_03890 SM00474 3'-5' exonuclease DU202_03892 SM00530 Helix-turn-helix XRE-family like proteins DU202_03895 SM00357 Cold shock protein domain DU202_03899 SM00342 helix_turn_helix, arabinose operon control protein DU202_03903 SM00477 DNA/RNA non-specific endonuclease DU202_03903 SM00892 DNA/RNA non-specific endonuclease DU202_03907 SM00342 helix_turn_helix, arabinose operon control protein DU202_03919 SM00342 helix_turn_helix, arabinose operon control protein DU202_03940 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_03942 SM00530 Helix-turn-helix XRE-family like proteins DU202_03951 SM00829 Enoylreductase DU202_03954 SM00267 diguanylate cyclase DU202_03960 SM00387 Histidine kinase-like ATPases DU202_03960 SM00388 His Kinase A (phosphoacceptor) domain DU202_03960 SM00448 cheY-homologous receiver domain DU202_03962 SM00421 helix_turn_helix, Lux Regulon DU202_03962 SM00448 cheY-homologous receiver domain DU202_03965 SM00344 helix_turn_helix ASNC type DU202_03973 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DU202_03975 SM00937 DU202_03975 DU202_03980 SM00116 Domain in cystathionine beta-synthase and other proteins. DU202_03980 SM01240 DU202_03980 DU202_03982 SM00849 Metallo-beta-lactamase superfamily DU202_03993 SM00864 Tubulin/FtsZ family, GTPase domain DU202_03993 SM00865 Tubulin/FtsZ family, C-terminal domain DU202_03994 SM00842 Cell division protein FtsA DU202_04009 SM00267 diguanylate cyclase DU202_04022 SM00387 Histidine kinase-like ATPases DU202_04022 SM00433 TopoisomeraseII DU202_04028 SM00257 Lysin motif DU202_04039 SM00448 cheY-homologous receiver domain DU202_04039 SM00862 Transcriptional regulatory protein, C terminal DU202_04040 SM00387 Histidine kinase-like ATPases DU202_04040 SM00388 His Kinase A (phosphoacceptor) domain DU202_04045 SM00450 Rhodanese Homology Domain DU202_04047 SM00248 ankyrin repeats DU202_04048 SM01060 DU202_04048 DU202_04073 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_04073 SM00866 DU202_04073 DU202_04075 SM00833 Cobalamin synthesis protein cobW C-terminal domain DU202_04081 SM00346 helix_turn_helix isocitrate lyase regulation DU202_04088 SM01130 DU202_04088 DU202_04093 SM00382 ATPases associated with a variety of cellular activities DU202_04099 SM00478 endonuclease III DU202_04099 SM00525 DU202_04099 DU202_04103 SM00829 Enoylreductase DU202_04104 SM00345 helix_turn_helix gluconate operon transcriptional repressor DU202_04112 SM00271 DnaJ molecular chaperone homology domain