locus-tag class description JCR17_00010 PF11638 DnaA N-terminal domain JCR17_00010 PF08299 Bacterial dnaA protein helix-turn-helix JCR17_00010 PF00308 Bacterial dnaA protein JCR17_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR17_00015 PF02767 DNA polymerase III beta subunit, central domain JCR17_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR17_00020 PF02463 RecF/RecN/SMC N terminal domain JCR17_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_00025 PF00204 DNA gyrase B JCR17_00025 PF00986 DNA gyrase B subunit, carboxyl terminus JCR17_00025 PF18053 DNA gyrase B subunit insert domain JCR17_00025 PF01751 Toprim domain JCR17_00035 PF09335 SNARE associated Golgi protein JCR17_00040 PF00005 ABC transporter JCR17_00040 PF12848 ABC transporter JCR17_00060 PF01521 Iron-sulphur cluster biosynthesis JCR17_00065 PF00561 alpha/beta hydrolase fold JCR17_00070 PF03702 Anhydro-N-acetylmuramic acid kinase JCR17_00075 PF00579 tRNA synthetases class I (W and Y) JCR17_00135 PF01189 16S rRNA methyltransferase RsmB/F JCR17_00135 PF01029 NusB family JCR17_00140 PF00551 Formyl transferase JCR17_00140 PF02911 Formyl transferase, C-terminal domain JCR17_00145 PF00920 Dehydratase family JCR17_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_00160 PF03466 LysR substrate binding domain JCR17_00165 PF00860 Permease family JCR17_00170 PF00311 Phosphoenolpyruvate carboxylase JCR17_00175 PF00440 Bacterial regulatory proteins, tetR family JCR17_00175 PF08361 MAATS-type transcriptional repressor, C-terminal region JCR17_00180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_00185 PF00873 AcrB/AcrD/AcrF family JCR17_00195 PF00684 DnaJ central domain JCR17_00195 PF01556 DnaJ C terminal domain JCR17_00195 PF00226 DnaJ domain JCR17_00205 PF01113 Dihydrodipicolinate reductase, N-terminus JCR17_00205 PF05173 Dihydrodipicolinate reductase, C-terminus JCR17_00215 PF07690 Major Facilitator Superfamily JCR17_00220 PF00248 Aldo/keto reductase family JCR17_00225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_00225 PF03466 LysR substrate binding domain JCR17_00240 PF00392 Bacterial regulatory proteins, gntR family JCR17_00240 PF00155 Aminotransferase class I and II JCR17_00245 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_00245 PF00107 Zinc-binding dehydrogenase JCR17_00250 PF03352 Methyladenine glycosylase JCR17_00265 PF14815 NUDIX domain JCR17_00265 PF10576 Iron-sulfur binding domain of endonuclease III JCR17_00265 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR17_00265 PF00633 Helix-hairpin-helix motif JCR17_00280 PF07043 Protein of unknown function (DUF1328) JCR17_00285 PF03692 Putative zinc- or iron-chelating domain JCR17_00290 PF07995 Glucose / Sorbosone dehydrogenase JCR17_00295 PF00004 ATPase family associated with various cellular activities (AAA) JCR17_00295 PF16193 AAA C-terminal domain JCR17_00295 PF12002 MgsA AAA+ ATPase C terminal JCR17_00300 PF01226 Formate/nitrite transporter JCR17_00310 PF01259 SAICAR synthetase JCR17_00320 PF00701 Dihydrodipicolinate synthetase family JCR17_00325 PF00857 Isochorismatase family JCR17_00330 PF01758 Sodium Bile acid symporter family JCR17_00335 PF01554 MatE JCR17_00340 PF04463 Protein of unknown function (DUF523) JCR17_00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR17_00355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR17_00360 PF02798 Glutathione S-transferase, N-terminal domain JCR17_00360 PF14497 Glutathione S-transferase, C-terminal domain JCR17_00370 PF00324 Amino acid permease JCR17_00380 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR17_00380 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR17_00390 PF00392 Bacterial regulatory proteins, gntR family JCR17_00390 PF07702 UTRA domain JCR17_00395 PF05962 HutD JCR17_00400 PF17391 Urocanase N-terminal domain JCR17_00400 PF17392 Urocanase C-terminal domain JCR17_00400 PF01175 Urocanase Rossmann-like domain JCR17_00405 PF00221 Aromatic amino acid lyase JCR17_00410 PF00324 Amino acid permease JCR17_00415 PF01979 Amidohydrolase family JCR17_00420 PF00491 Arginase family JCR17_00435 PF01177 Asp/Glu/Hydantoin racemase JCR17_00440 PF01380 SIS domain JCR17_00445 PF14602 Hexapeptide repeat of succinyl-transferase JCR17_00445 PF12804 MobA-like NTP transferase domain JCR17_00445 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_00450 PF04608 Phosphatidylglycerophosphatase A JCR17_00455 PF02769 AIR synthase related protein, C-terminal domain JCR17_00455 PF00586 AIR synthase related protein, N-terminal domain JCR17_00460 PF01029 NusB family JCR17_00465 PF00885 6,7-dimethyl-8-ribityllumazine synthase JCR17_00470 PF00925 GTP cyclohydrolase II JCR17_00470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR17_00495 PF02580 D-Tyr-tRNA(Tyr) deacylase JCR17_00500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCR17_00500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR17_00505 PF00581 Rhodanese-like domain JCR17_00510 PF02666 Phosphatidylserine decarboxylase JCR17_00515 PF03069 Acetamidase/Formamidase family JCR17_00535 PF11808 Phosphate regulon sensor protein PhoR JCR17_00535 PF00989 PAS fold JCR17_00535 PF00512 His Kinase A (phospho-acceptor) domain JCR17_00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_00540 PF00072 Response regulator receiver domain JCR17_00540 PF00486 Transcriptional regulatory protein, C terminal JCR17_00550 PF00106 short chain dehydrogenase JCR17_00555 PF01554 MatE JCR17_00560 PF00155 Aminotransferase class I and II JCR17_00565 PF04286 Protein of unknown function (DUF445) JCR17_00580 PF04262 Glutamate-cysteine ligase JCR17_00585 PF02600 Disulfide bond formation protein DsbB JCR17_00590 PF04717 Type VI secretion system, phage-baseplate injector JCR17_00590 PF13296 Putative type VI secretion system Rhs element Vgr JCR17_00590 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR17_00595 PF00877 NlpC/P60 family JCR17_00595 PF01476 LysM domain JCR17_00610 PF05728 Uncharacterised protein family (UPF0227) JCR17_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_00615 PF00204 DNA gyrase B JCR17_00615 PF01751 Toprim domain JCR17_00615 PF00986 DNA gyrase B subunit, carboxyl terminus JCR17_00620 PF00106 short chain dehydrogenase JCR17_00625 PF04115 Ureidoglycolate lyase JCR17_00630 PF03561 Allantoicase repeat JCR17_00635 PF01494 FAD binding domain JCR17_00645 PF00860 Permease family JCR17_00650 PF00576 HIUase/Transthyretin family JCR17_00680 PF02683 Cytochrome C biogenesis protein transmembrane region JCR17_00680 PF11412 Disulphide bond corrector protein DsbC JCR17_00685 PF00990 Diguanylate cyclase, GGDEF domain JCR17_00685 PF07694 5TMR of 5TMR-LYT JCR17_00690 PF07859 alpha/beta hydrolase fold JCR17_00700 PF03960 ArsC family JCR17_00705 PF03372 Endonuclease/Exonuclease/phosphatase family JCR17_00710 PF00156 Phosphoribosyl transferase domain JCR17_00715 PF00593 TonB dependent receptor JCR17_00715 PF07715 TonB-dependent Receptor Plug Domain JCR17_00725 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JCR17_00725 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JCR17_00730 PF03033 Glycosyltransferase family 28 N-terminal domain JCR17_00730 PF04101 Glycosyltransferase family 28 C-terminal domain JCR17_00735 PF01225 Mur ligase family, catalytic domain JCR17_00735 PF02875 Mur ligase family, glutamate ligase domain JCR17_00735 PF08245 Mur ligase middle domain JCR17_00740 PF01820 D-ala D-ala ligase N-terminus JCR17_00740 PF07478 D-ala D-ala ligase C-terminus JCR17_00745 PF08478 POTRA domain, FtsQ-type JCR17_00745 PF03799 Cell division protein FtsQ JCR17_00750 PF02491 SHS2 domain inserted in FTSA JCR17_00755 PF00091 Tubulin/FtsZ family, GTPase domain JCR17_00755 PF12327 FtsZ family, C-terminal domain JCR17_00760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JCR17_00770 PF01551 Peptidase family M23 JCR17_00775 PF17831 Pyruvate dehydrogenase E1 component middle domain JCR17_00775 PF00456 Transketolase, thiamine diphosphate binding domain JCR17_00780 PF02817 e3 binding domain JCR17_00780 PF00364 Biotin-requiring enzyme JCR17_00780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR17_00790 PF01169 Uncharacterized protein family UPF0016 JCR17_00795 PF00593 TonB dependent receptor JCR17_00795 PF07715 TonB-dependent Receptor Plug Domain JCR17_00800 PF01613 Flavin reductase like domain JCR17_00800 PF00258 Flavodoxin JCR17_00805 PF03692 Putative zinc- or iron-chelating domain JCR17_00810 PF00571 CBS domain JCR17_00810 PF00478 IMP dehydrogenase / GMP reductase domain JCR17_00815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR17_00815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR17_00815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR17_00815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR17_00820 PF01243 Pyridoxamine 5'-phosphate oxidase JCR17_00820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JCR17_00825 PF01368 DHH family JCR17_00825 PF17768 RecJ OB domain JCR17_00825 PF02272 DHHA1 domain JCR17_00845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR17_00850 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JCR17_00855 PF04452 RNA methyltransferase JCR17_00860 PF00924 Mechanosensitive ion channel JCR17_00870 PF00501 AMP-binding enzyme JCR17_00870 PF16177 Acetyl-coenzyme A synthetase N-terminus JCR17_00870 PF13193 AMP-binding enzyme C-terminal domain JCR17_00875 PF00857 Isochorismatase family JCR17_00880 PF01037 Lrp/AsnC ligand binding domain JCR17_00885 PF00872 Transposase, Mutator family JCR17_00890 PF00296 Luciferase-like monooxygenase JCR17_00895 PF03358 NADPH-dependent FMN reductase JCR17_00900 PF00196 Bacterial regulatory proteins, luxR family JCR17_00900 PF00072 Response regulator receiver domain JCR17_00910 PF00672 HAMP domain JCR17_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_00910 PF00512 His Kinase A (phospho-acceptor) domain JCR17_00910 PF01627 Hpt domain JCR17_00910 PF00072 Response regulator receiver domain JCR17_00915 PF04341 Protein of unknown function, DUF485 JCR17_00920 PF00474 Sodium:solute symporter family JCR17_00930 PF02028 BCCT, betaine/carnitine/choline family transporter JCR17_00940 PF00990 Diguanylate cyclase, GGDEF domain JCR17_00950 PF00005 ABC transporter JCR17_00950 PF17760 UvrA interaction domain JCR17_00950 PF17755 UvrA DNA-binding domain JCR17_00955 PF00440 Bacterial regulatory proteins, tetR family JCR17_00955 PF16925 Tetracyclin repressor-like, C-terminal domain JCR17_00960 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_00960 PF00107 Zinc-binding dehydrogenase JCR17_00970 PF06942 GlpM protein JCR17_00975 PF08543 Phosphomethylpyrimidine kinase JCR17_00975 PF03070 TENA/THI-4/PQQC family JCR17_00975 PF02581 Thiamine monophosphate synthase JCR17_00985 PF07690 Major Facilitator Superfamily JCR17_00990 PF00436 Single-strand binding protein family JCR17_01000 PF03591 AzlC protein JCR17_01010 PF00324 Amino acid permease JCR17_01015 PF00155 Aminotransferase class I and II JCR17_01015 PF00392 Bacterial regulatory proteins, gntR family JCR17_01020 PF00202 Aminotransferase class-III JCR17_01025 PF00171 Aldehyde dehydrogenase family JCR17_01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_01035 PF00857 Isochorismatase family JCR17_01040 PF05726 Pirin C-terminal cupin domain JCR17_01040 PF02678 Pirin JCR17_01045 PF01593 Flavin containing amine oxidoreductase JCR17_01065 PF07690 Major Facilitator Superfamily JCR17_01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_01070 PF03466 LysR substrate binding domain JCR17_01090 PF00248 Aldo/keto reductase family JCR17_01095 PF12833 Helix-turn-helix domain JCR17_01095 PF02311 AraC-like ligand binding domain JCR17_01125 PF01638 HxlR-like helix-turn-helix JCR17_01130 PF02525 Flavodoxin-like fold JCR17_01150 PF02705 K+ potassium transporter JCR17_01175 PF00230 Major intrinsic protein JCR17_01190 PF00977 Histidine biosynthesis protein JCR17_01195 PF01636 Phosphotransferase enzyme family JCR17_01210 PF03992 Antibiotic biosynthesis monooxygenase JCR17_01225 PF00977 Histidine biosynthesis protein JCR17_01240 PF00117 Glutamine amidotransferase class-I JCR17_01245 PF00475 Imidazoleglycerol-phosphate dehydratase JCR17_01265 PF00583 Acetyltransferase (GNAT) family JCR17_01270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JCR17_01270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JCR17_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_01280 PF00672 HAMP domain JCR17_01280 PF00512 His Kinase A (phospho-acceptor) domain JCR17_01285 PF00072 Response regulator receiver domain JCR17_01285 PF00486 Transcriptional regulatory protein, C terminal JCR17_01290 PF00575 S1 RNA binding domain JCR17_01290 PF09371 Tex-like protein N-terminal domain JCR17_01290 PF16921 Tex protein YqgF-like domain JCR17_01290 PF17674 HHH domain JCR17_01295 PF01740 STAS domain JCR17_01295 PF00916 Sulfate permease family JCR17_01300 PF00106 short chain dehydrogenase JCR17_01305 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR17_01310 PF12848 ABC transporter JCR17_01310 PF00005 ABC transporter JCR17_01335 PF04191 Phospholipid methyltransferase JCR17_01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_01355 PF00529 HlyD membrane-fusion protein of T1SS JCR17_01360 PF00873 AcrB/AcrD/AcrF family JCR17_01365 PF01545 Cation efflux family JCR17_01395 PF00324 Amino acid permease JCR17_01410 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR17_01425 PF01795 MraW methylase family JCR17_01435 PF00905 Penicillin binding protein transpeptidase domain JCR17_01435 PF03717 Penicillin-binding Protein dimerisation domain JCR17_01440 PF01225 Mur ligase family, catalytic domain JCR17_01440 PF08245 Mur ligase middle domain JCR17_01440 PF02875 Mur ligase family, glutamate ligase domain JCR17_01445 PF08245 Mur ligase middle domain JCR17_01445 PF02875 Mur ligase family, glutamate ligase domain JCR17_01445 PF01225 Mur ligase family, catalytic domain JCR17_01450 PF00953 Glycosyl transferase family 4 JCR17_01460 PF13847 Methyltransferase domain JCR17_01465 PF00905 Penicillin binding protein transpeptidase domain JCR17_01465 PF17092 Penicillin-binding protein OB-like domain JCR17_01465 PF00912 Transglycosylase JCR17_01470 PF11104 Type IV pilus assembly protein PilM; JCR17_01475 PF05137 Fimbrial assembly protein (PilN) JCR17_01480 PF04350 Pilus assembly protein, PilO JCR17_01490 PF07660 Secretin and TonB N terminus short domain JCR17_01490 PF03958 Bacterial type II/III secretion system short domain JCR17_01490 PF11741 AMIN domain JCR17_01490 PF00263 Bacterial type II and III secretion system protein JCR17_01495 PF01202 Shikimate kinase JCR17_01500 PF01761 3-dehydroquinate synthase JCR17_01510 PF00310 Glutamine amidotransferases class-II JCR17_01510 PF01493 GXGXG motif JCR17_01510 PF04898 Glutamate synthase central domain JCR17_01510 PF01645 Conserved region in glutamate synthase JCR17_01515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JCR17_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_01525 PF04011 LemA family JCR17_01530 PF04536 TPM domain JCR17_01540 PF00114 Pilin (bacterial filament) JCR17_01540 PF07963 Prokaryotic N-terminal methylation motif JCR17_01550 PF04932 O-Antigen ligase JCR17_01550 PF11846 Virulence factor membrane-bound polymerase, C-terminal JCR17_01550 PF15864 Protein glycosylation ligase JCR17_01555 PF00210 Ferritin-like domain JCR17_01560 PF04324 BFD-like [2Fe-2S] binding domain JCR17_01565 PF01042 Endoribonuclease L-PSP JCR17_01570 PF13291 ACT domain JCR17_01570 PF02824 TGS domain JCR17_01570 PF04607 Region found in RelA / SpoT proteins JCR17_01580 PF01192 RNA polymerase Rpb6 JCR17_01585 PF00625 Guanylate kinase JCR17_01590 PF02401 LytB protein JCR17_01630 PF00886 Ribosomal protein S16 JCR17_01635 PF01782 RimM N-terminal domain JCR17_01635 PF05239 PRC-barrel domain JCR17_01640 PF01746 tRNA (Guanine-1)-methyltransferase JCR17_01645 PF01245 Ribosomal protein L19 JCR17_01650 PF00561 alpha/beta hydrolase fold JCR17_01655 PF03280 Proteobacterial lipase chaperone protein JCR17_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCR17_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCR17_01660 PF09157 Pseudouridine synthase II TruB, C-terminal JCR17_01665 PF01925 Sulfite exporter TauE/SafE JCR17_01675 PF00892 EamA-like transporter family JCR17_01680 PF00892 EamA-like transporter family JCR17_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR17_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR17_01690 PF02913 FAD linked oxidases, C-terminal domain JCR17_01690 PF01565 FAD binding domain JCR17_01700 PF03992 Antibiotic biosynthesis monooxygenase JCR17_01705 PF02525 Flavodoxin-like fold JCR17_01715 PF07690 Major Facilitator Superfamily JCR17_01720 PF12805 FUSC-like inner membrane protein yccS JCR17_01725 PF00080 Copper/zinc superoxide dismutase (SODC) JCR17_01730 PF01594 AI-2E family transporter JCR17_01735 PF13614 AAA domain JCR17_01765 PF00324 Amino acid permease JCR17_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR17_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR17_01775 PF00202 Aminotransferase class-III JCR17_01780 PF04958 Arginine N-succinyltransferase beta subunit JCR17_01785 PF00171 Aldehyde dehydrogenase family JCR17_01790 PF04996 Succinylarginine dihydrolase JCR17_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JCR17_01810 PF05922 Peptidase inhibitor I9 JCR17_01810 PF00082 Subtilase family JCR17_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_01825 PF03466 LysR substrate binding domain JCR17_01830 PF00892 EamA-like transporter family JCR17_01840 PF05746 DALR anticodon binding domain JCR17_01840 PF02092 Glycyl-tRNA synthetase beta subunit JCR17_01845 PF02091 Glycyl-tRNA synthetase alpha subunit JCR17_01870 PF00571 CBS domain JCR17_01875 PF04024 PspC domain JCR17_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_01885 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR17_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_01895 PF01488 Shikimate / quinate 5-dehydrogenase JCR17_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCR17_01895 PF08501 Shikimate dehydrogenase substrate binding domain JCR17_01900 PF01218 Coproporphyrinogen III oxidase JCR17_01905 PF00925 GTP cyclohydrolase II JCR17_01910 PF02780 Transketolase, C-terminal domain JCR17_01910 PF02779 Transketolase, pyrimidine binding domain JCR17_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCR17_01915 PF00459 Inositol monophosphatase family JCR17_01920 PF03880 DbpA RNA binding domain JCR17_01920 PF00270 DEAD/DEAH box helicase JCR17_01920 PF00271 Helicase conserved C-terminal domain JCR17_01920 PF12343 Cold shock protein DEAD box A JCR17_01930 PF00005 ABC transporter JCR17_01935 PF02405 Permease MlaE JCR17_01945 PF05494 MlaC protein JCR17_01955 PF01544 CorA-like Mg2+ transporter protein JCR17_01960 PF03641 Possible lysine decarboxylase JCR17_01965 PF00293 NUDIX domain JCR17_01970 PF00156 Phosphoribosyl transferase domain JCR17_01975 PF17191 RecG wedge domain JCR17_01975 PF00271 Helicase conserved C-terminal domain JCR17_01975 PF00270 DEAD/DEAH box helicase JCR17_01990 PF01553 Acyltransferase JCR17_02000 PF00375 Sodium:dicarboxylate symporter family JCR17_02010 PF01926 50S ribosome-binding GTPase JCR17_02015 PF02082 Transcriptional regulator JCR17_02020 PF00970 Oxidoreductase FAD-binding domain JCR17_02020 PF00042 Globin JCR17_02020 PF00175 Oxidoreductase NAD-binding domain JCR17_02025 PF05872 Bacterial protein of unknown function (DUF853) JCR17_02030 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR17_02035 PF00117 Glutamine amidotransferase class-I JCR17_02040 PF00338 Ribosomal protein S10p/S20e JCR17_02045 PF00297 Ribosomal protein L3 JCR17_02050 PF00573 Ribosomal protein L4/L1 family JCR17_02055 PF00276 Ribosomal protein L23 JCR17_02060 PF00181 Ribosomal Proteins L2, RNA binding domain JCR17_02060 PF03947 Ribosomal Proteins L2, C-terminal domain JCR17_02065 PF00203 Ribosomal protein S19 JCR17_02070 PF00237 Ribosomal protein L22p/L17e JCR17_02075 PF00189 Ribosomal protein S3, C-terminal domain JCR17_02075 PF07650 KH domain JCR17_02080 PF00252 Ribosomal protein L16p/L10e JCR17_02085 PF00831 Ribosomal L29 protein JCR17_02090 PF00366 Ribosomal protein S17 JCR17_02095 PF00238 Ribosomal protein L14p/L23e JCR17_02100 PF00467 KOW motif JCR17_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCR17_02105 PF00673 ribosomal L5P family C-terminus JCR17_02105 PF00281 Ribosomal protein L5 JCR17_02110 PF00253 Ribosomal protein S14p/S29e JCR17_02115 PF00410 Ribosomal protein S8 JCR17_02120 PF00347 Ribosomal protein L6 JCR17_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCR17_02130 PF00333 Ribosomal protein S5, N-terminal domain JCR17_02130 PF03719 Ribosomal protein S5, C-terminal domain JCR17_02135 PF00327 Ribosomal protein L30p/L7e JCR17_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCR17_02145 PF00344 SecY translocase JCR17_02150 PF00444 Ribosomal protein L36 JCR17_02155 PF00416 Ribosomal protein S13/S18 JCR17_02160 PF00411 Ribosomal protein S11 JCR17_02165 PF01479 S4 domain JCR17_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain JCR17_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCR17_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCR17_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain JCR17_02175 PF01196 Ribosomal protein L17 JCR17_02180 PF00743 Flavin-binding monooxygenase-like JCR17_02185 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_02190 PF03937 Flavinator of succinate dehydrogenase JCR17_02220 PF09526 Probable metal-binding protein (DUF2387) JCR17_02225 PF01432 Peptidase family M3 JCR17_02230 PF00575 S1 RNA binding domain JCR17_02230 PF00773 RNB domain JCR17_02230 PF08206 Ribonuclease B OB domain JCR17_02230 PF08461 Ribonuclease R winged-helix domain JCR17_02230 PF17876 Cold shock domain JCR17_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCR17_02280 PF12833 Helix-turn-helix domain JCR17_02285 PF00892 EamA-like transporter family JCR17_02290 PF03631 Virulence factor BrkB JCR17_02295 PF03358 NADPH-dependent FMN reductase JCR17_02320 PF02130 Uncharacterized protein family UPF0054 JCR17_02325 PF02562 PhoH-like protein JCR17_02330 PF01938 TRAM domain JCR17_02330 PF00919 Uncharacterized protein family UPF0004 JCR17_02330 PF04055 Radical SAM superfamily JCR17_02335 PF01551 Peptidase family M23 JCR17_02335 PF10145 Phage-related minor tail protein JCR17_02335 PF01464 Transglycosylase SLT domain JCR17_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain JCR17_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCR17_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JCR17_02370 PF01066 CDP-alcohol phosphatidyltransferase JCR17_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_02415 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_02420 PF17932 Tetracyclin repressor-like, C-terminal domain JCR17_02420 PF00440 Bacterial regulatory proteins, tetR family JCR17_02435 PF01039 Carboxyl transferase domain JCR17_02440 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_02450 PF00364 Biotin-requiring enzyme JCR17_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR17_02450 PF02785 Biotin carboxylase C-terminal domain JCR17_02450 PF00289 Biotin carboxylase, N-terminal domain JCR17_02460 PF04386 Stringent starvation protein B JCR17_02465 PF00043 Glutathione S-transferase, C-terminal domain JCR17_02465 PF13417 Glutathione S-transferase, N-terminal domain JCR17_02470 PF00380 Ribosomal protein S9/S16 JCR17_02475 PF00572 Ribosomal protein L13 JCR17_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JCR17_02485 PF00398 Ribosomal RNA adenine dimethylase JCR17_02490 PF00149 Calcineurin-like phosphoesterase JCR17_02510 PF16360 GTP-binding GTPase Middle Region JCR17_02510 PF01926 50S ribosome-binding GTPase JCR17_02510 PF13167 GTP-binding GTPase N-terminal JCR17_02520 PF13091 PLD-like domain JCR17_02525 PF00149 Calcineurin-like phosphoesterase JCR17_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence JCR17_02530 PF00691 OmpA family JCR17_02530 PF01389 OmpA-like transmembrane domain JCR17_02535 PF00990 Diguanylate cyclase, GGDEF domain JCR17_02535 PF17152 Periplasmic sensor domain JCR17_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR17_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_02580 PF04273 Putative phosphatase (DUF442) JCR17_02580 PF00753 Metallo-beta-lactamase superfamily JCR17_02585 PF00561 alpha/beta hydrolase fold JCR17_02590 PF00085 Thioredoxin JCR17_02595 PF03061 Thioesterase superfamily JCR17_02605 PF04461 Protein of unknown function (DUF520) JCR17_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR17_02615 PF01266 FAD dependent oxidoreductase JCR17_02625 PF03795 YCII-related domain JCR17_02630 PF04279 Intracellular septation protein A JCR17_02635 PF02811 PHP domain JCR17_02640 PF01062 Bestrophin, RFP-TM, chloride channel JCR17_02645 PF04002 RadC-like JAB domain JCR17_02650 PF02441 Flavoprotein JCR17_02650 PF04127 DNA / pantothenate metabolism flavoprotein JCR17_02655 PF07549 SecD/SecF GG Motif JCR17_02655 PF02355 Protein export membrane protein JCR17_02660 PF02355 Protein export membrane protein JCR17_02660 PF13721 SecD export protein N-terminal TM region JCR17_02660 PF07549 SecD/SecF GG Motif JCR17_02665 PF02699 Preprotein translocase subunit JCR17_02670 PF01702 Queuine tRNA-ribosyltransferase JCR17_02685 PF02547 Queuosine biosynthesis protein JCR17_02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_02695 PF00512 His Kinase A (phospho-acceptor) domain JCR17_02695 PF07689 KaiB domain JCR17_02700 PF08335 GlnD PII-uridylyltransferase JCR17_02700 PF03710 Glutamate-ammonia ligase adenylyltransferase JCR17_02705 PF01063 Amino-transferase class IV JCR17_02720 PF01522 Polysaccharide deacetylase JCR17_02725 PF00535 Glycosyl transferase family 2 JCR17_02730 PF00534 Glycosyl transferases group 1 JCR17_02730 PF13439 Glycosyltransferase Family 4 JCR17_02755 PF11380 Stealth protein CR2, conserved region 2 JCR17_02755 PF17101 Stealth protein CR1, conserved region 1 JCR17_02755 PF17102 Stealth protein CR3, conserved region 3 JCR17_02760 PF02938 GAD domain JCR17_02760 PF00152 tRNA synthetases class II (D, K and N) JCR17_02760 PF01336 OB-fold nucleic acid binding domain JCR17_02770 PF07715 TonB-dependent Receptor Plug Domain JCR17_02770 PF00593 TonB dependent receptor JCR17_02790 PF06146 Phosphate-starvation-inducible E JCR17_02795 PF02798 Glutathione S-transferase, N-terminal domain JCR17_02795 PF00043 Glutathione S-transferase, C-terminal domain JCR17_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_02800 PF03466 LysR substrate binding domain JCR17_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR17_02805 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_02810 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR17_02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_02820 PF00672 HAMP domain JCR17_02820 PF00512 His Kinase A (phospho-acceptor) domain JCR17_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_02825 PF00486 Transcriptional regulatory protein, C terminal JCR17_02825 PF00072 Response regulator receiver domain JCR17_02830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JCR17_02850 PF01923 Cobalamin adenosyltransferase JCR17_02855 PF00593 TonB dependent receptor JCR17_02855 PF07715 TonB-dependent Receptor Plug Domain JCR17_02860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JCR17_02865 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_02890 PF00290 Tryptophan synthase alpha chain JCR17_02895 PF01039 Carboxyl transferase domain JCR17_02900 PF02875 Mur ligase family, glutamate ligase domain JCR17_02900 PF08245 Mur ligase middle domain JCR17_02915 PF00753 Metallo-beta-lactamase superfamily JCR17_02920 PF00578 AhpC/TSA family JCR17_02920 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR17_02925 PF02810 SEC-C motif JCR17_02925 PF01043 SecA preprotein cross-linking domain JCR17_02925 PF07516 SecA Wing and Scaffold domain JCR17_02925 PF07517 SecA DEAD-like domain JCR17_02935 PF07690 Major Facilitator Superfamily JCR17_02935 PF00083 Sugar (and other) transporter JCR17_02940 PF03006 Haemolysin-III related JCR17_02965 PF00378 Enoyl-CoA hydratase/isomerase JCR17_02965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR17_02965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR17_02970 PF00108 Thiolase, N-terminal domain JCR17_02970 PF02803 Thiolase, C-terminal domain JCR17_02975 PF02311 AraC-like ligand binding domain JCR17_02975 PF12833 Helix-turn-helix domain JCR17_02980 PF02515 CoA-transferase family III JCR17_02985 PF04966 Carbohydrate-selective porin, OprB family JCR17_02990 PF01011 PQQ enzyme repeat JCR17_02995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR17_02995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR17_03005 PF00893 Small Multidrug Resistance protein JCR17_03015 PF00108 Thiolase, N-terminal domain JCR17_03015 PF02803 Thiolase, C-terminal domain JCR17_03025 PF00691 OmpA family JCR17_03025 PF13505 Outer membrane protein beta-barrel domain JCR17_03035 PF01139 tRNA-splicing ligase RtcB JCR17_03040 PF00324 Amino acid permease JCR17_03045 PF05175 Methyltransferase small domain JCR17_03045 PF08468 Methyltransferase small domain N-terminal JCR17_03050 PF00860 Permease family JCR17_03055 PF00009 Elongation factor Tu GTP binding domain JCR17_03055 PF03144 Elongation factor Tu domain 2 JCR17_03055 PF00679 Elongation factor G C-terminus JCR17_03060 PF01741 Large-conductance mechanosensitive channel, MscL JCR17_03075 PF06827 Zinc finger found in FPG and IleRS JCR17_03075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCR17_03075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCR17_03080 PF02245 Methylpurine-DNA glycosylase (MPG) JCR17_03085 PF00593 TonB dependent receptor JCR17_03085 PF07715 TonB-dependent Receptor Plug Domain JCR17_03100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR17_03105 PF03547 Membrane transport protein JCR17_03115 PF13098 Thioredoxin-like domain JCR17_03115 PF10411 Disulfide bond isomerase protein N-terminus JCR17_03120 PF01571 Aminomethyltransferase folate-binding domain JCR17_03130 PF04343 Protein of unknown function, DUF488 JCR17_03135 PF08274 PhnA Zinc-Ribbon JCR17_03135 PF03831 PhnA domain JCR17_03140 PF07411 Domain of unknown function (DUF1508) JCR17_03145 PF04073 Aminoacyl-tRNA editing domain JCR17_03145 PF03129 Anticodon binding domain JCR17_03145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR17_03150 PF00873 AcrB/AcrD/AcrF family JCR17_03165 PF00072 Response regulator receiver domain JCR17_03170 PF00072 Response regulator receiver domain JCR17_03175 PF01584 CheW-like domain JCR17_03180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCR17_03180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JCR17_03185 PF00072 Response regulator receiver domain JCR17_03185 PF01584 CheW-like domain JCR17_03185 PF01627 Hpt domain JCR17_03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_03195 PF01546 Peptidase family M20/M25/M40 JCR17_03195 PF07687 Peptidase dimerisation domain JCR17_03200 PF08085 Entericidin EcnA/B family JCR17_03210 PF04304 Protein of unknown function (DUF454) JCR17_03215 PF03734 L,D-transpeptidase catalytic domain JCR17_03215 PF17969 L,D-transpeptidase C-terminal domain JCR17_03255 PF00667 FAD binding domain JCR17_03255 PF00258 Flavodoxin JCR17_03255 PF00175 Oxidoreductase NAD-binding domain JCR17_03265 PF12805 FUSC-like inner membrane protein yccS JCR17_03270 PF07690 Major Facilitator Superfamily JCR17_03275 PF00881 Nitroreductase family JCR17_03290 PF01235 Sodium:alanine symporter family JCR17_03295 PF01734 Patatin-like phospholipase JCR17_03300 PF13291 ACT domain JCR17_03300 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_03305 PF05992 SbmA/BacA-like family JCR17_03335 PF02637 GatB domain JCR17_03335 PF02934 GatB/GatE catalytic domain JCR17_03340 PF01425 Amidase JCR17_03345 PF02686 Glu-tRNAGln amidotransferase C subunit JCR17_03355 PF04085 rod shape-determining protein MreC JCR17_03360 PF04093 rod shape-determining protein MreD JCR17_03365 PF02545 Maf-like protein JCR17_03370 PF10150 Ribonuclease E/G family JCR17_03370 PF00575 S1 RNA binding domain JCR17_03380 PF06974 Protein of unknown function (DUF1298) JCR17_03380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JCR17_03385 PF01507 Phosphoadenosine phosphosulfate reductase family JCR17_03400 PF02525 Flavodoxin-like fold JCR17_03420 PF02673 Bacitracin resistance protein BacA JCR17_03425 PF06719 AraC-type transcriptional regulator N-terminus JCR17_03425 PF12833 Helix-turn-helix domain JCR17_03430 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_03430 PF14765 Polyketide synthase dehydratase JCR17_03430 PF00550 Phosphopantetheine attachment site JCR17_03430 PF08659 KR domain JCR17_03430 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_03430 PF16197 Ketoacyl-synthetase C-terminal extension JCR17_03430 PF09277 Erythronolide synthase, docking JCR17_03430 PF08990 Erythronolide synthase docking JCR17_03430 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_03430 PF00698 Acyl transferase domain JCR17_03435 PF01965 DJ-1/PfpI family JCR17_03445 PF00324 Amino acid permease JCR17_03450 PF04303 PrpF protein JCR17_03455 PF00348 Polyprenyl synthetase JCR17_03460 PF04237 YjbR JCR17_03465 PF01145 SPFH domain / Band 7 family JCR17_03475 PF01734 Patatin-like phospholipase JCR17_03500 PF13737 Transposase DDE domain JCR17_03510 PF00072 Response regulator receiver domain JCR17_03510 PF00486 Transcriptional regulatory protein, C terminal JCR17_03515 PF08521 Two-component sensor kinase N-terminal JCR17_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_03515 PF00512 His Kinase A (phospho-acceptor) domain JCR17_03525 PF00909 Ammonium Transporter Family JCR17_03530 PF03466 LysR substrate binding domain JCR17_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_03550 PF08264 Anticodon-binding domain of tRNA JCR17_03550 PF00133 tRNA synthetases class I (I, L, M and V) JCR17_03550 PF10458 Valyl tRNA synthetase tRNA binding arm JCR17_03570 PF01906 Putative heavy-metal-binding JCR17_03575 PF01906 Putative heavy-metal-binding JCR17_03580 PF02321 Outer membrane efflux protein JCR17_03585 PF00873 AcrB/AcrD/AcrF family JCR17_03590 PF00529 HlyD membrane-fusion protein of T1SS JCR17_03590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_03595 PF01569 PAP2 superfamily JCR17_03605 PF00348 Polyprenyl synthetase JCR17_03615 PF00829 Ribosomal prokaryotic L21 protein JCR17_03620 PF01016 Ribosomal L27 protein JCR17_03625 PF03548 Outer membrane lipoprotein carrier protein LolA JCR17_03635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR17_03635 PF02403 Seryl-tRNA synthetase N-terminal domain JCR17_03640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR17_03640 PF14824 Sirohaem biosynthesis protein central JCR17_03640 PF10414 Sirohaem synthase dimerisation region JCR17_03645 PF00588 SpoU rRNA Methylase family JCR17_03650 PF01638 HxlR-like helix-turn-helix JCR17_03655 PF03358 NADPH-dependent FMN reductase JCR17_03660 PF13520 Amino acid permease JCR17_03665 PF00465 Iron-containing alcohol dehydrogenase JCR17_03675 PF03099 Biotin/lipoate A/B protein ligase family JCR17_03680 PF04359 Protein of unknown function (DUF493) JCR17_03685 PF04546 Sigma-70, non-essential region JCR17_03685 PF04545 Sigma-70, region 4 JCR17_03685 PF04539 Sigma-70 region 3 JCR17_03685 PF04542 Sigma-70 region 2 JCR17_03685 PF00140 Sigma-70 factor, region 1.2 JCR17_03685 PF03979 Sigma-70 factor, region 1.1 JCR17_03705 PF17773 UPF0176 acylphosphatase like domain JCR17_03705 PF00581 Rhodanese-like domain JCR17_03715 PF00285 Citrate synthase, C-terminal domain JCR17_03720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR17_03725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR17_03730 PF02910 Fumarate reductase flavoprotein C-term JCR17_03730 PF00890 FAD binding domain JCR17_03735 PF13085 2Fe-2S iron-sulfur cluster binding domain JCR17_03750 PF00676 Dehydrogenase E1 component JCR17_03750 PF16078 2-oxoglutarate dehydrogenase N-terminus JCR17_03750 PF16870 2-oxoglutarate dehydrogenase C-terminal JCR17_03750 PF02779 Transketolase, pyrimidine binding domain JCR17_03755 PF00364 Biotin-requiring enzyme JCR17_03755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR17_03755 PF02817 e3 binding domain JCR17_03760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR17_03760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_03765 PF00549 CoA-ligase JCR17_03765 PF08442 ATP-grasp domain JCR17_03770 PF02629 CoA binding domain JCR17_03770 PF00549 CoA-ligase JCR17_03775 PF00579 tRNA synthetases class I (W and Y) JCR17_03780 PF05661 Protein of unknown function (DUF808) JCR17_03785 PF04228 Putative neutral zinc metallopeptidase JCR17_03790 PF00999 Sodium/hydrogen exchanger family JCR17_03825 PF09587 Bacterial capsule synthesis protein PGA_cap JCR17_03835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR17_03840 PF00582 Universal stress protein family JCR17_03845 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_03850 PF03449 Transcription elongation factor, N-terminal JCR17_03850 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR17_03855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR17_03855 PF02142 MGS-like domain JCR17_03855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCR17_03860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCR17_03860 PF00117 Glutamine amidotransferase class-I JCR17_03875 PF01985 CRS1 / YhbY (CRM) domain JCR17_03880 PF01728 FtsJ-like methyltransferase JCR17_03885 PF17862 AAA+ lid domain JCR17_03885 PF00004 ATPase family associated with various cellular activities (AAA) JCR17_03885 PF01434 Peptidase family M41 JCR17_03885 PF06480 FtsH Extracellular JCR17_03890 PF00809 Pterin binding enzyme JCR17_03910 PF16655 PhoD-like phosphatase, N-terminal domain JCR17_03910 PF09423 PhoD-like phosphatase JCR17_03925 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCR17_03925 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCR17_03940 PF00083 Sugar (and other) transporter JCR17_03945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCR17_03945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCR17_03950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCR17_03950 PF01266 FAD dependent oxidoreductase JCR17_03955 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JCR17_03955 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JCR17_03960 PF00781 Diacylglycerol kinase catalytic domain JCR17_03965 PF00149 Calcineurin-like phosphoesterase JCR17_03975 PF00166 Chaperonin 10 Kd subunit JCR17_03980 PF00118 TCP-1/cpn60 chaperonin family JCR17_03985 PF01219 Prokaryotic diacylglycerol kinase JCR17_03995 PF03009 Glycerophosphoryl diester phosphodiesterase family JCR17_04000 PF00873 AcrB/AcrD/AcrF family JCR17_04010 PF01435 Peptidase family M48 JCR17_04015 PF01464 Transglycosylase SLT domain JCR17_04020 PF01171 PP-loop family JCR17_04030 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR17_04030 PF01464 Transglycosylase SLT domain JCR17_04035 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR17_04035 PF03449 Transcription elongation factor, N-terminal JCR17_04050 PF00501 AMP-binding enzyme JCR17_04050 PF13193 AMP-binding enzyme C-terminal domain JCR17_04050 PF00975 Thioesterase domain JCR17_04050 PF00550 Phosphopantetheine attachment site JCR17_04050 PF00668 Condensation domain JCR17_04100 PF00216 Bacterial DNA-binding protein JCR17_04125 PF13401 AAA domain JCR17_04125 PF01471 Putative peptidoglycan binding domain JCR17_04155 PF10502 Signal peptidase, peptidase S26 JCR17_04190 PF03237 Terminase-like family JCR17_04205 PF06074 Protein of unknown function (DUF935) JCR17_04210 PF04233 Phage Mu protein F like protein JCR17_04215 PF05069 Phage virion morphogenesis family JCR17_04230 PF10124 Mu-like prophage major head subunit gpT JCR17_04325 PF00881 Nitroreductase family JCR17_04340 PF02595 Glycerate kinase family JCR17_04345 PF00384 Molybdopterin oxidoreductase JCR17_04350 PF02634 FdhD/NarQ family JCR17_04355 PF06803 Protein of unknown function (DUF1232) JCR17_04360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR17_04360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR17_04360 PF11890 Domain of unknown function (DUF3410) JCR17_04365 PF00152 tRNA synthetases class II (D, K and N) JCR17_04375 PF18073 Rubredoxin metal binding domain JCR17_04380 PF00324 Amino acid permease JCR17_04390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCR17_04390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCR17_04395 PF01678 Diaminopimelate epimerase JCR17_04400 PF01810 LysE type translocator JCR17_04405 PF02899 Phage integrase, N-terminal SAM-like domain JCR17_04405 PF00589 Phage integrase family JCR17_04410 PF01012 Electron transfer flavoprotein domain JCR17_04415 PF01012 Electron transfer flavoprotein domain JCR17_04415 PF00766 Electron transfer flavoprotein FAD-binding domain JCR17_04420 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR17_04420 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR17_04435 PF00535 Glycosyl transferase family 2 JCR17_04455 PF13533 Biotin-lipoyl like JCR17_04465 PF00266 Aminotransferase class-V JCR17_04480 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCR17_04490 PF02687 FtsX-like permease family JCR17_04490 PF12704 MacB-like periplasmic core domain JCR17_04495 PF00005 ABC transporter JCR17_04500 PF03772 Competence protein JCR17_04500 PF00753 Metallo-beta-lactamase superfamily JCR17_04500 PF13567 Domain of unknown function (DUF4131) JCR17_04510 PF06965 Na+/H+ antiporter 1 JCR17_04510 PF01343 Peptidase family S49 JCR17_04515 PF12697 Alpha/beta hydrolase family JCR17_04520 PF00551 Formyl transferase JCR17_04525 PF00586 AIR synthase related protein, N-terminal domain JCR17_04525 PF02769 AIR synthase related protein, C-terminal domain JCR17_04530 PF01594 AI-2E family transporter JCR17_04535 PF00308 Bacterial dnaA protein JCR17_04535 PF08299 Bacterial dnaA protein helix-turn-helix JCR17_04535 PF11638 DnaA N-terminal domain JCR17_04570 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR17_04570 PF00588 SpoU rRNA Methylase family JCR17_04575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JCR17_04585 PF00691 OmpA family JCR17_04590 PF04052 TolB amino-terminal domain JCR17_04590 PF07676 WD40-like Beta Propeller Repeat JCR17_04600 PF02472 Biopolymer transport protein ExbD/TolR JCR17_04605 PF01618 MotA/TolQ/ExbB proton channel family JCR17_04610 PF03061 Thioesterase superfamily JCR17_04615 PF01546 Peptidase family M20/M25/M40 JCR17_04615 PF07687 Peptidase dimerisation domain JCR17_04620 PF17864 RuvB AAA lid domain JCR17_04620 PF05491 RuvB C-terminal winged helix domain JCR17_04620 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCR17_04625 PF07499 RuvA, C-terminal domain JCR17_04625 PF01330 RuvA N terminal domain JCR17_04630 PF01966 HD domain JCR17_04635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCR17_04635 PF02769 AIR synthase related protein, C-terminal domain JCR17_04635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JCR17_04640 PF07690 Major Facilitator Superfamily JCR17_04645 PF01784 NIF3 (NGG1p interacting factor 3) JCR17_04650 PF00378 Enoyl-CoA hydratase/isomerase JCR17_04655 PF01467 Cytidylyltransferase-like JCR17_04655 PF00293 NUDIX domain JCR17_04665 PF00578 AhpC/TSA family JCR17_04680 PF06508 Queuosine biosynthesis protein QueC JCR17_04690 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_04690 PF14602 Hexapeptide repeat of succinyl-transferase JCR17_04690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JCR17_04700 PF03466 LysR substrate binding domain JCR17_04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_04705 PF00005 ABC transporter JCR17_04705 PF12857 TOBE-like domain JCR17_04710 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_04715 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_04730 PF01063 Amino-transferase class IV JCR17_04735 PF02618 YceG-like family JCR17_04740 PF02223 Thymidylate kinase JCR17_04750 PF02910 Fumarate reductase flavoprotein C-term JCR17_04750 PF00890 FAD binding domain JCR17_04755 PF13180 PDZ domain JCR17_04765 PF03144 Elongation factor Tu domain 2 JCR17_04765 PF06421 GTP-binding protein LepA C-terminus JCR17_04765 PF00679 Elongation factor G C-terminus JCR17_04765 PF00009 Elongation factor Tu GTP binding domain JCR17_04770 PF10502 Signal peptidase, peptidase S26 JCR17_04780 PF00035 Double-stranded RNA binding motif JCR17_04780 PF14622 Ribonuclease-III-like JCR17_04785 PF07650 KH domain JCR17_04785 PF01926 50S ribosome-binding GTPase JCR17_04795 PF11967 Recombination protein O N terminal JCR17_04795 PF02565 Recombination protein O C terminal JCR17_04800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JCR17_04805 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JCR17_04810 PF00106 short chain dehydrogenase JCR17_04845 PF00155 Aminotransferase class I and II JCR17_04855 PF17151 Periplasmic sensor domain JCR17_04855 PF00990 Diguanylate cyclase, GGDEF domain JCR17_04865 PF17757 UvrB interaction domain JCR17_04865 PF12344 Ultra-violet resistance protein B JCR17_04865 PF02151 UvrB/uvrC motif JCR17_04865 PF04851 Type III restriction enzyme, res subunit JCR17_04865 PF00271 Helicase conserved C-terminal domain JCR17_04875 PF00892 EamA-like transporter family JCR17_04880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR17_04880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR17_04895 PF01926 50S ribosome-binding GTPase JCR17_04895 PF01018 GTP1/OBG JCR17_04900 PF00696 Amino acid kinase family JCR17_04900 PF01472 PUA domain JCR17_04910 PF07759 Protein of unknown function (DUF1615) JCR17_04915 PF01207 Dihydrouridine synthase (Dus) JCR17_04920 PF03060 Nitronate monooxygenase JCR17_04935 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR17_04965 PF03441 FAD binding domain of DNA photolyase JCR17_04965 PF00875 DNA photolyase JCR17_04970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR17_04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_04980 PF00768 D-alanyl-D-alanine carboxypeptidase JCR17_04980 PF07943 Penicillin-binding protein 5, C-terminal domain JCR17_04990 PF03971 Monomeric isocitrate dehydrogenase JCR17_04995 PF00849 RNA pseudouridylate synthase JCR17_05000 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR17_05020 PF06779 Uncharacterised MFS-type transporter YbfB JCR17_05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_05025 PF03466 LysR substrate binding domain JCR17_05035 PF02567 Phenazine biosynthesis-like protein JCR17_05040 PF05193 Peptidase M16 inactive domain JCR17_05040 PF00675 Insulinase (Peptidase family M16) JCR17_05065 PF02581 Thiamine monophosphate synthase JCR17_05070 PF00202 Aminotransferase class-III JCR17_05080 PF00849 RNA pseudouridylate synthase JCR17_05085 PF18339 RapA N-terminal Tudor like domain 1 JCR17_05085 PF00176 SNF2 family N-terminal domain JCR17_05085 PF18337 RapA N-terminal Tudor like domain JCR17_05085 PF00271 Helicase conserved C-terminal domain JCR17_05085 PF12137 RNA polymerase recycling family C-terminal JCR17_05095 PF00440 Bacterial regulatory proteins, tetR family JCR17_05100 PF00175 Oxidoreductase NAD-binding domain JCR17_05100 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_05100 PF00970 Oxidoreductase FAD-binding domain JCR17_05105 PF00487 Fatty acid desaturase JCR17_05115 PF00440 Bacterial regulatory proteins, tetR family JCR17_05115 PF17754 MftR C-terminal domain JCR17_05125 PF00202 Aminotransferase class-III JCR17_05130 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR17_05135 PF00171 Aldehyde dehydrogenase family JCR17_05140 PF01037 Lrp/AsnC ligand binding domain JCR17_05145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR17_05145 PF00205 Thiamine pyrophosphate enzyme, central domain JCR17_05145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR17_05150 PF00324 Amino acid permease JCR17_05155 PF12849 PBP superfamily domain JCR17_05160 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_05165 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_05170 PF00005 ABC transporter JCR17_05175 PF08496 Peptidase family S49 N-terminal JCR17_05175 PF01343 Peptidase family S49 JCR17_05190 PF00206 Lyase JCR17_05190 PF08328 Adenylosuccinate lyase C-terminal JCR17_05195 PF04356 Protein of unknown function (DUF489) JCR17_05205 PF00293 NUDIX domain JCR17_05205 PF13344 Haloacid dehalogenase-like hydrolase JCR17_05210 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_05215 PF07943 Penicillin-binding protein 5, C-terminal domain JCR17_05215 PF00768 D-alanyl-D-alanine carboxypeptidase JCR17_05230 PF01975 Survival protein SurE JCR17_05235 PF01551 Peptidase family M23 JCR17_05235 PF01476 LysM domain JCR17_05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_05240 PF03466 LysR substrate binding domain JCR17_05245 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR17_05245 PF13654 AAA domain JCR17_05250 PF07690 Major Facilitator Superfamily JCR17_05255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR17_05260 PF13593 SBF-like CPA transporter family (DUF4137) JCR17_05265 PF01197 Ribosomal protein L31 JCR17_05280 PF04055 Radical SAM superfamily JCR17_05285 PF08207 Elongation factor P (EF-P) KOW-like domain JCR17_05285 PF01132 Elongation factor P (EF-P) OB domain JCR17_05285 PF09285 Elongation factor P, C-terminal JCR17_05290 PF02554 Carbon starvation protein CstA JCR17_05290 PF13722 5TM C-terminal transporter carbon starvation CstA JCR17_05295 PF04328 Selenoprotein, putative JCR17_05325 PF06018 CodY GAF-like domain JCR17_05325 PF13556 PucR C-terminal helix-turn-helix domain JCR17_05325 PF17853 GGDEF-like domain JCR17_05340 PF00171 Aldehyde dehydrogenase family JCR17_05345 PF00324 Amino acid permease JCR17_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_05350 PF03466 LysR substrate binding domain JCR17_05355 PF02028 BCCT, betaine/carnitine/choline family transporter JCR17_05360 PF02028 BCCT, betaine/carnitine/choline family transporter JCR17_05365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR17_05365 PF00355 Rieske [2Fe-2S] domain JCR17_05370 PF00171 Aldehyde dehydrogenase family JCR17_05375 PF18113 Rubredoxin binding C-terminal domain JCR17_05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_05380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR17_05380 PF01266 FAD dependent oxidoreductase JCR17_05400 PF00892 EamA-like transporter family JCR17_05410 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JCR17_05415 PF00083 Sugar (and other) transporter JCR17_05420 PF13378 Enolase C-terminal domain-like JCR17_05420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR17_05425 PF08990 Erythronolide synthase docking JCR17_05425 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_05425 PF08659 KR domain JCR17_05425 PF00550 Phosphopantetheine attachment site JCR17_05425 PF16197 Ketoacyl-synthetase C-terminal extension JCR17_05425 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_05425 PF14765 Polyketide synthase dehydratase JCR17_05425 PF00698 Acyl transferase domain JCR17_05425 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_05425 PF09277 Erythronolide synthase, docking JCR17_05430 PF00440 Bacterial regulatory proteins, tetR family JCR17_05450 PF17954 Quercetinase C-terminal cupin domain JCR17_05450 PF02678 Pirin JCR17_05460 PF13309 HTH domain JCR17_05460 PF08348 YheO-like PAS domain JCR17_05470 PF13193 AMP-binding enzyme C-terminal domain JCR17_05470 PF00668 Condensation domain JCR17_05470 PF00550 Phosphopantetheine attachment site JCR17_05470 PF00501 AMP-binding enzyme JCR17_05475 PF00501 AMP-binding enzyme JCR17_05475 PF13193 AMP-binding enzyme C-terminal domain JCR17_05475 PF00668 Condensation domain JCR17_05475 PF00550 Phosphopantetheine attachment site JCR17_05475 PF00975 Thioesterase domain JCR17_05480 PF01032 FecCD transport family JCR17_05485 PF01032 FecCD transport family JCR17_05490 PF00005 ABC transporter JCR17_05495 PF01497 Periplasmic binding protein JCR17_05500 PF00593 TonB dependent receptor JCR17_05500 PF07715 TonB-dependent Receptor Plug Domain JCR17_05505 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR17_05510 PF00501 AMP-binding enzyme JCR17_05510 PF00668 Condensation domain JCR17_05510 PF00550 Phosphopantetheine attachment site JCR17_05515 PF00501 AMP-binding enzyme JCR17_05515 PF13193 AMP-binding enzyme C-terminal domain JCR17_05520 PF00857 Isochorismatase family JCR17_05520 PF00550 Phosphopantetheine attachment site JCR17_05525 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR17_05535 PF00005 ABC transporter JCR17_05540 PF00005 ABC transporter JCR17_05565 PF00425 chorismate binding enzyme JCR17_05575 PF01208 Uroporphyrinogen decarboxylase (URO-D) JCR17_05580 PF05675 Protein of unknown function (DUF817) JCR17_05595 PF00144 Beta-lactamase JCR17_05605 PF01227 GTP cyclohydrolase I JCR17_05610 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_05610 PF01799 [2Fe-2S] binding domain JCR17_05630 PF00218 Indole-3-glycerol phosphate synthase JCR17_05635 PF00591 Glycosyl transferase family, a/b domain JCR17_05635 PF02885 Glycosyl transferase family, helical bundle domain JCR17_05640 PF07715 TonB-dependent Receptor Plug Domain JCR17_05640 PF00593 TonB dependent receptor JCR17_05645 PF01433 Peptidase family M1 domain JCR17_05645 PF11838 ERAP1-like C-terminal domain JCR17_05650 PF00117 Glutamine amidotransferase class-I JCR17_05740 PF01555 DNA methylase JCR17_05770 PF01555 DNA methylase JCR17_06115 PF02384 N-6 DNA Methylase JCR17_06115 PF12161 HsdM N-terminal domain JCR17_06330 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JCR17_06385 PF13356 Arm DNA-binding domain JCR17_06385 PF00589 Phage integrase family JCR17_06395 PF00854 POT family JCR17_06400 PF00120 Glutamine synthetase, catalytic domain JCR17_06400 PF03951 Glutamine synthetase, beta-Grasp domain JCR17_06405 PF04345 Chorismate lyase JCR17_06410 PF01040 UbiA prenyltransferase family JCR17_06445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCR17_06445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCR17_06450 PF01784 NIF3 (NGG1p interacting factor 3) JCR17_06455 PF13180 PDZ domain JCR17_06460 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR17_06460 PF01743 Poly A polymerase head domain JCR17_06465 PF01515 Phosphate acetyl/butaryl transferase JCR17_06465 PF03949 Malic enzyme, NAD binding domain JCR17_06465 PF00390 Malic enzyme, N-terminal domain JCR17_06470 PF00563 EAL domain JCR17_06470 PF00990 Diguanylate cyclase, GGDEF domain JCR17_06470 PF03707 Bacterial signalling protein N terminal repeat JCR17_06475 PF04452 RNA methyltransferase JCR17_06480 PF02219 Methylenetetrahydrofolate reductase JCR17_06485 PF05221 S-adenosyl-L-homocysteine hydrolase JCR17_06485 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JCR17_06500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_06500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_06500 PF09317 Domain of unknown function (DUF1974) JCR17_06505 PF04055 Radical SAM superfamily JCR17_06510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR17_06510 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_06520 PF07690 Major Facilitator Superfamily JCR17_06530 PF00557 Metallopeptidase family M24 JCR17_06535 PF00318 Ribosomal protein S2 JCR17_06540 PF00889 Elongation factor TS JCR17_06550 PF12833 Helix-turn-helix domain JCR17_06570 PF03330 Lytic transglycolase JCR17_06570 PF05036 Sporulation related domain JCR17_06575 PF13406 Transglycosylase SLT domain JCR17_06580 PF01098 Cell cycle protein JCR17_06590 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JCR17_06590 PF14489 QueF-like protein JCR17_06595 PF01061 ABC-2 type transporter JCR17_06600 PF00005 ABC transporter JCR17_06630 PF00464 Serine hydroxymethyltransferase JCR17_06635 PF02321 Outer membrane efflux protein JCR17_06640 PF00873 AcrB/AcrD/AcrF family JCR17_06645 PF13533 Biotin-lipoyl like JCR17_06650 PF03466 LysR substrate binding domain JCR17_06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_06655 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR17_06660 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_06665 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_06670 PF00005 ABC transporter JCR17_06675 PF00893 Small Multidrug Resistance protein JCR17_06680 PF00037 4Fe-4S binding domain JCR17_06685 PF16325 Peptidase family U32 C-terminal domain JCR17_06685 PF01136 Peptidase family U32 JCR17_06690 PF00155 Aminotransferase class I and II JCR17_06690 PF00392 Bacterial regulatory proteins, gntR family JCR17_06695 PF02567 Phenazine biosynthesis-like protein JCR17_06700 PF00175 Oxidoreductase NAD-binding domain JCR17_06700 PF00970 Oxidoreductase FAD-binding domain JCR17_06705 PF01980 tRNA-methyltransferase O JCR17_06705 PF18389 TrmO C-terminal domain JCR17_06715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR17_06715 PF00437 Type II/IV secretion system protein JCR17_06725 PF00486 Transcriptional regulatory protein, C terminal JCR17_06725 PF00072 Response regulator receiver domain JCR17_06730 PF08521 Two-component sensor kinase N-terminal JCR17_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_06730 PF00512 His Kinase A (phospho-acceptor) domain JCR17_06740 PF00293 NUDIX domain JCR17_06750 PF14814 Bifunctional transglycosylase second domain JCR17_06750 PF00905 Penicillin binding protein transpeptidase domain JCR17_06750 PF00912 Transglycosylase JCR17_06755 PF01513 ATP-NAD kinase JCR17_06760 PF07023 Protein of unknown function (DUF1315) JCR17_06765 PF02885 Glycosyl transferase family, helical bundle domain JCR17_06765 PF00591 Glycosyl transferase family, a/b domain JCR17_06770 PF00375 Sodium:dicarboxylate symporter family JCR17_06775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_06775 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_06775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_06780 PF00756 Putative esterase JCR17_06785 PF00800 Prephenate dehydratase JCR17_06785 PF01817 Chorismate mutase type II JCR17_06785 PF01842 ACT domain JCR17_06790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR17_06800 PF07687 Peptidase dimerisation domain JCR17_06800 PF01546 Peptidase family M20/M25/M40 JCR17_06805 PF12706 Beta-lactamase superfamily domain JCR17_06815 PF03883 Peroxide stress protein YaaA JCR17_06825 PF05690 Thiazole biosynthesis protein ThiG JCR17_06835 PF04241 Protein of unknown function (DUF423) JCR17_06840 PF04545 Sigma-70, region 4 JCR17_06840 PF00140 Sigma-70 factor, region 1.2 JCR17_06840 PF04542 Sigma-70 region 2 JCR17_06850 PF00313 'Cold-shock' DNA-binding domain JCR17_06855 PF00270 DEAD/DEAH box helicase JCR17_06855 PF00271 Helicase conserved C-terminal domain JCR17_06865 PF00881 Nitroreductase family JCR17_06870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCR17_06870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCR17_06890 PF01180 Dihydroorotate dehydrogenase JCR17_06895 PF02674 Colicin V production protein JCR17_06900 PF00156 Phosphoribosyl transferase domain JCR17_06915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR17_06915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR17_06920 PF01435 Peptidase family M48 JCR17_06925 PF09424 Yqey-like protein JCR17_06930 PF01165 Ribosomal protein S21 JCR17_06935 PF00814 Glycoprotease family JCR17_06955 PF00069 Protein kinase domain JCR17_06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_06980 PF03466 LysR substrate binding domain JCR17_06985 PF00202 Aminotransferase class-III JCR17_06990 PF00171 Aldehyde dehydrogenase family JCR17_06995 PF00324 Amino acid permease JCR17_07000 PF13737 Transposase DDE domain JCR17_07030 PF04076 Bacterial OB fold (BOF) protein JCR17_07055 PF00561 alpha/beta hydrolase fold JCR17_07060 PF03616 Sodium/glutamate symporter JCR17_07070 PF07729 FCD domain JCR17_07070 PF00392 Bacterial regulatory proteins, gntR family JCR17_07085 PF13737 Transposase DDE domain JCR17_07105 PF13737 Transposase DDE domain JCR17_07135 PF08946 Osmosensory transporter coiled coil JCR17_07135 PF00083 Sugar (and other) transporter JCR17_07155 PF00155 Aminotransferase class I and II JCR17_07160 PF02080 TrkA-C domain JCR17_07160 PF06826 Predicted Permease Membrane Region JCR17_07170 PF04403 Paraquat-inducible protein A JCR17_07175 PF02470 MlaD protein JCR17_07185 PF01177 Asp/Glu/Hydantoin racemase JCR17_07195 PF07995 Glucose / Sorbosone dehydrogenase JCR17_07205 PF13610 DDE domain JCR17_07220 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_07225 PF01909 Nucleotidyltransferase domain JCR17_07225 PF13427 Domain of unknown function (DUF4111) JCR17_07230 PF00893 Small Multidrug Resistance protein JCR17_07235 PF00809 Pterin binding enzyme JCR17_07250 PF07091 Ribosomal RNA methyltransferase (FmrO) JCR17_07270 PF12848 ABC transporter JCR17_07270 PF00005 ABC transporter JCR17_07275 PF01636 Phosphotransferase enzyme family JCR17_07285 PF13817 IS66 C-terminal element JCR17_07285 PF03050 Transposase IS66 family JCR17_07285 PF13005 zinc-finger binding domain of transposase IS66 JCR17_07285 PF13007 Transposase C of IS166 homeodomain JCR17_07290 PF13610 DDE domain JCR17_07300 PF13610 DDE domain JCR17_07315 PF13610 DDE domain JCR17_07330 PF00753 Metallo-beta-lactamase superfamily JCR17_07330 PF16123 Hydroxyacylglutathione hydrolase C-terminus JCR17_07335 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_07340 PF00005 ABC transporter JCR17_07340 PF09383 NIL domain JCR17_07345 PF03180 NLPA lipoprotein JCR17_07350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCR17_07350 PF02843 Phosphoribosylglycinamide synthetase, C domain JCR17_07350 PF02844 Phosphoribosylglycinamide synthetase, N domain JCR17_07355 PF02142 MGS-like domain JCR17_07355 PF01808 AICARFT/IMPCHase bienzyme JCR17_07360 PF02954 Bacterial regulatory protein, Fis family JCR17_07380 PF01134 Glucose inhibited division protein A JCR17_07380 PF13932 GidA associated domain JCR17_07390 PF14403 Circularly permuted ATP-grasp type 2 JCR17_07400 PF01841 Transglutaminase-like superfamily JCR17_07400 PF08379 Bacterial transglutaminase-like N-terminal region JCR17_07410 PF01168 Alanine racemase, N-terminal domain JCR17_07410 PF00842 Alanine racemase, C-terminal domain JCR17_07415 PF00772 DnaB-like helicase N terminal domain JCR17_07415 PF03796 DnaB-like helicase C terminal domain JCR17_07420 PF01281 Ribosomal protein L9, N-terminal domain JCR17_07420 PF03948 Ribosomal protein L9, C-terminal domain JCR17_07425 PF01084 Ribosomal protein S18 JCR17_07430 PF01250 Ribosomal protein S6 JCR17_07435 PF01040 UbiA prenyltransferase family JCR17_07440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JCR17_07445 PF00510 Cytochrome c oxidase subunit III JCR17_07450 PF00115 Cytochrome C and Quinol oxidase polypeptide I JCR17_07455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JCR17_07455 PF06481 COX Aromatic Rich Motif JCR17_07465 PF00391 PEP-utilising enzyme, mobile domain JCR17_07465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCR17_07465 PF02896 PEP-utilising enzyme, TIM barrel domain JCR17_07470 PF03618 Kinase/pyrophosphorylase JCR17_07480 PF01522 Polysaccharide deacetylase JCR17_07480 PF14883 Hypothetical glycosyl hydrolase family 13 JCR17_07485 PF00535 Glycosyl transferase family 2 JCR17_07500 PF00296 Luciferase-like monooxygenase JCR17_07515 PF03466 LysR substrate binding domain JCR17_07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_07525 PF00472 RF-1 domain JCR17_07525 PF03462 PCRF domain JCR17_07530 PF13847 Methyltransferase domain JCR17_07530 PF17827 PrmC N-terminal domain JCR17_07535 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_07540 PF09084 NMT1/THI5 like JCR17_07545 PF12833 Helix-turn-helix domain JCR17_07550 PF00106 short chain dehydrogenase JCR17_07555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_07555 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_07555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_07560 PF13193 AMP-binding enzyme C-terminal domain JCR17_07560 PF00501 AMP-binding enzyme JCR17_07565 PF01613 Flavin reductase like domain JCR17_07570 PF00899 ThiF family JCR17_07575 PF03109 ABC1 family JCR17_07590 PF03814 Potassium-transporting ATPase A subunit JCR17_07600 PF02669 K+-transporting ATPase, c chain JCR17_07605 PF13493 Domain of unknown function (DUF4118) JCR17_07605 PF02702 Osmosensitive K+ channel His kinase sensor domain JCR17_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_07605 PF00512 His Kinase A (phospho-acceptor) domain JCR17_07610 PF00072 Response regulator receiver domain JCR17_07610 PF00486 Transcriptional regulatory protein, C terminal JCR17_07615 PF00120 Glutamine synthetase, catalytic domain JCR17_07625 PF03232 Ubiquinone biosynthesis protein COQ7 JCR17_07630 PF07690 Major Facilitator Superfamily JCR17_07635 PF17243 POTRA domain TamA domain 1 JCR17_07635 PF07244 Surface antigen variable number repeat JCR17_07635 PF01103 Surface antigen JCR17_07650 PF00330 Aconitase family (aconitate hydratase) JCR17_07650 PF06434 Aconitate hydratase 2 N-terminus JCR17_07650 PF11791 Aconitate B N-terminal domain JCR17_07660 PF00520 Ion transport protein JCR17_07660 PF00027 Cyclic nucleotide-binding domain JCR17_07665 PF07690 Major Facilitator Superfamily JCR17_07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_07680 PF03466 LysR substrate binding domain JCR17_07685 PF04284 Protein of unknown function (DUF441) JCR17_07695 PF01479 S4 domain JCR17_07695 PF00849 RNA pseudouridylate synthase JCR17_07710 PF01479 S4 domain JCR17_07710 PF00849 RNA pseudouridylate synthase JCR17_07715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCR17_07720 PF01119 DNA mismatch repair protein, C-terminal domain JCR17_07720 PF08676 MutL C terminal dimerisation domain JCR17_07730 PF17209 Hfq protein JCR17_07740 PF00881 Nitroreductase family JCR17_07750 PF00149 Calcineurin-like phosphoesterase JCR17_07755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR17_07760 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JCR17_07760 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR17_07765 PF00117 Glutamine amidotransferase class-I JCR17_07765 PF00958 GMP synthase C terminal domain JCR17_07765 PF02540 NAD synthase JCR17_07770 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JCR17_07775 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JCR17_07780 PF13520 Amino acid permease JCR17_07785 PF00171 Aldehyde dehydrogenase family JCR17_07800 PF00465 Iron-containing alcohol dehydrogenase JCR17_07805 PF05970 PIF1-like helicase JCR17_07805 PF14493 Helix-turn-helix domain JCR17_07815 PF06445 GyrI-like small molecule binding domain JCR17_07820 PF02110 Hydroxyethylthiazole kinase family JCR17_07835 PF01433 Peptidase family M1 domain JCR17_07835 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JCR17_07835 PF11940 Domain of unknown function (DUF3458) Ig-like fold JCR17_07845 PF00106 short chain dehydrogenase JCR17_07855 PF01817 Chorismate mutase type II JCR17_07860 PF01037 Lrp/AsnC ligand binding domain JCR17_07870 PF00440 Bacterial regulatory proteins, tetR family JCR17_07875 PF07715 TonB-dependent Receptor Plug Domain JCR17_07875 PF00593 TonB dependent receptor JCR17_07880 PF00924 Mechanosensitive ion channel JCR17_07915 PF07715 TonB-dependent Receptor Plug Domain JCR17_07915 PF00593 TonB dependent receptor JCR17_07935 PF12848 ABC transporter JCR17_07935 PF00005 ABC transporter JCR17_07940 PF00582 Universal stress protein family JCR17_07965 PF00690 Cation transporter/ATPase, N-terminus JCR17_07965 PF00689 Cation transporting ATPase, C-terminus JCR17_07970 PF02308 MgtC family JCR17_07975 PF03594 Benzoate membrane transport protein JCR17_07980 PF01037 Lrp/AsnC ligand binding domain JCR17_07985 PF01810 LysE type translocator JCR17_07990 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCR17_07995 PF03466 LysR substrate binding domain JCR17_07995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_08005 PF02803 Thiolase, C-terminal domain JCR17_08005 PF00108 Thiolase, N-terminal domain JCR17_08015 PF01575 MaoC like domain JCR17_08020 PF00144 Beta-lactamase JCR17_08030 PF07690 Major Facilitator Superfamily JCR17_08035 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JCR17_08035 PF12169 DNA polymerase III subunits gamma and tau domain III JCR17_08035 PF12170 DNA polymerase III tau subunit V interacting with alpha JCR17_08040 PF05506 Domain of unknown function (DUF756) JCR17_08040 PF04185 Phosphoesterase family JCR17_08045 PF03061 Thioesterase superfamily JCR17_08050 PF00465 Iron-containing alcohol dehydrogenase JCR17_08060 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR17_08065 PF01565 FAD binding domain JCR17_08065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCR17_08080 PF01645 Conserved region in glutamate synthase JCR17_08100 PF12832 MFS_1 like family JCR17_08110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR17_08110 PF00289 Biotin carboxylase, N-terminal domain JCR17_08110 PF02785 Biotin carboxylase C-terminal domain JCR17_08115 PF00364 Biotin-requiring enzyme JCR17_08120 PF01220 Dehydroquinase class II JCR17_08125 PF00817 impB/mucB/samB family JCR17_08125 PF11799 impB/mucB/samB family C-terminal domain JCR17_08125 PF13438 Domain of unknown function (DUF4113) JCR17_08135 PF00005 ABC transporter JCR17_08140 PF00486 Transcriptional regulatory protein, C terminal JCR17_08140 PF00072 Response regulator receiver domain JCR17_08150 PF04324 BFD-like [2Fe-2S] binding domain JCR17_08150 PF13806 Rieske-like [2Fe-2S] domain JCR17_08150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR17_08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_08150 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR17_08150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR17_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_08155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR17_08155 PF04324 BFD-like [2Fe-2S] binding domain JCR17_08155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR17_08155 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR17_08160 PF04324 BFD-like [2Fe-2S] binding domain JCR17_08160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR17_08160 PF00384 Molybdopterin oxidoreductase JCR17_08160 PF01568 Molydopterin dinucleotide binding domain JCR17_08165 PF12804 MobA-like NTP transferase domain JCR17_08170 PF00384 Molybdopterin oxidoreductase JCR17_08170 PF01568 Molydopterin dinucleotide binding domain JCR17_08170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR17_08175 PF04055 Radical SAM superfamily JCR17_08175 PF06463 Molybdenum Cofactor Synthesis C JCR17_08185 PF02391 MoaE protein JCR17_08190 PF00994 Probable molybdopterin binding domain JCR17_08190 PF01967 MoaC family JCR17_08195 PF03454 MoeA C-terminal region (domain IV) JCR17_08195 PF03453 MoeA N-terminal region (domain I and II) JCR17_08195 PF00994 Probable molybdopterin binding domain JCR17_08200 PF01638 HxlR-like helix-turn-helix JCR17_08205 PF00392 Bacterial regulatory proteins, gntR family JCR17_08205 PF00155 Aminotransferase class I and II JCR17_08210 PF00892 EamA-like transporter family JCR17_08230 PF02635 DsrE/DsrF-like family JCR17_08235 PF16363 GDP-mannose 4,6 dehydratase JCR17_08240 PF10415 Fumarase C C-terminus JCR17_08240 PF00206 Lyase JCR17_08260 PF01266 FAD dependent oxidoreductase JCR17_08270 PF02542 YgbB family JCR17_08280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR17_08280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR17_08285 PF00440 Bacterial regulatory proteins, tetR family JCR17_08290 PF02954 Bacterial regulatory protein, Fis family JCR17_08290 PF00072 Response regulator receiver domain JCR17_08290 PF00158 Sigma-54 interaction domain JCR17_08295 PF00512 His Kinase A (phospho-acceptor) domain JCR17_08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_08295 PF00989 PAS fold JCR17_08300 PF18693 TRAM domain JCR17_08300 PF04055 Radical SAM superfamily JCR17_08300 PF00919 Uncharacterized protein family UPF0004 JCR17_08305 PF00696 Amino acid kinase family JCR17_08310 PF01765 Ribosome recycling factor JCR17_08315 PF01255 Putative undecaprenyl diphosphate synthase JCR17_08325 PF13288 DXP reductoisomerase C-terminal domain JCR17_08325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JCR17_08325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JCR17_08330 PF13180 PDZ domain JCR17_08330 PF17820 PDZ domain JCR17_08330 PF02163 Peptidase family M50 JCR17_08335 PF01103 Surface antigen JCR17_08335 PF07244 Surface antigen variable number repeat JCR17_08345 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_08345 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JCR17_08350 PF07977 FabA-like domain JCR17_08355 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JCR17_08355 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_08370 PF02631 RecX family JCR17_08375 PF00154 recA bacterial DNA recombination protein JCR17_08380 PF01479 S4 domain JCR17_08385 PF13419 Haloacid dehalogenase-like hydrolase JCR17_08410 PF01037 Lrp/AsnC ligand binding domain JCR17_08415 PF00266 Aminotransferase class-V JCR17_08420 PF00324 Amino acid permease JCR17_08430 PF00082 Subtilase family JCR17_08430 PF05922 Peptidase inhibitor I9 JCR17_08435 PF01740 STAS domain JCR17_08435 PF00916 Sulfate permease family JCR17_08440 PF02586 SOS response associated peptidase (SRAP) JCR17_08445 PF07995 Glucose / Sorbosone dehydrogenase JCR17_08455 PF03707 Bacterial signalling protein N terminal repeat JCR17_08455 PF00563 EAL domain JCR17_08455 PF00990 Diguanylate cyclase, GGDEF domain JCR17_08475 PF02378 Phosphotransferase system, EIIC JCR17_08475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCR17_08480 PF00294 pfkB family carbohydrate kinase JCR17_08485 PF00391 PEP-utilising enzyme, mobile domain JCR17_08485 PF00381 PTS HPr component phosphorylation site JCR17_08485 PF05524 PEP-utilising enzyme, N-terminal JCR17_08485 PF02896 PEP-utilising enzyme, TIM barrel domain JCR17_08485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCR17_08510 PF05525 Branched-chain amino acid transport protein JCR17_08515 PF00557 Metallopeptidase family M24 JCR17_08520 PF03466 LysR substrate binding domain JCR17_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_08530 PF00462 Glutaredoxin JCR17_08535 PF00202 Aminotransferase class-III JCR17_08540 PF00571 CBS domain JCR17_08540 PF00478 IMP dehydrogenase / GMP reductase domain JCR17_08565 PF02881 SRP54-type protein, helical bundle domain JCR17_08565 PF00448 SRP54-type protein, GTPase domain JCR17_08575 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JCR17_08590 PF08173 Membrane bound YbgT-like protein JCR17_08595 PF02322 Cytochrome bd terminal oxidase subunit II JCR17_08600 PF01654 Cytochrome bd terminal oxidase subunit I JCR17_08610 PF13737 Transposase DDE domain JCR17_08615 PF07290 Protein of unknown function (DUF1449) JCR17_08625 PF00294 pfkB family carbohydrate kinase JCR17_08630 PF00593 TonB dependent receptor JCR17_08630 PF07715 TonB-dependent Receptor Plug Domain JCR17_08635 PF05193 Peptidase M16 inactive domain JCR17_08635 PF00675 Insulinase (Peptidase family M16) JCR17_08635 PF08367 Peptidase M16C associated JCR17_08640 PF02253 Phospholipase A1 JCR17_08645 PF02386 Cation transport protein JCR17_08650 PF02080 TrkA-C domain JCR17_08650 PF02254 TrkA-N domain JCR17_08655 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_08655 PF00585 C-terminal regulatory domain of Threonine dehydratase JCR17_08660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCR17_08675 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR17_08675 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR17_08685 PF02617 ATP-dependent Clp protease adaptor protein ClpS JCR17_08690 PF07724 AAA domain (Cdc48 subfamily) JCR17_08690 PF17871 AAA lid domain JCR17_08690 PF02861 Clp amino terminal domain, pathogenicity island component JCR17_08690 PF10431 C-terminal, D2-small domain, of ClpB protein JCR17_08690 PF00004 ATPase family associated with various cellular activities (AAA) JCR17_08695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JCR17_08700 PF00793 DAHP synthetase I family JCR17_08715 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_08715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR17_08745 PF06418 CTP synthase N-terminus JCR17_08745 PF00117 Glutamine amidotransferase class-I JCR17_08750 PF00793 DAHP synthetase I family JCR17_08755 PF00113 Enolase, C-terminal TIM barrel domain JCR17_08755 PF03952 Enolase, N-terminal domain JCR17_08760 PF04239 Protein of unknown function (DUF421) JCR17_08765 PF04977 Septum formation initiator JCR17_08770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JCR17_08775 PF01144 Coenzyme A transferase JCR17_08780 PF01144 Coenzyme A transferase JCR17_08785 PF02803 Thiolase, C-terminal domain JCR17_08785 PF00108 Thiolase, N-terminal domain JCR17_08790 PF10397 Adenylosuccinate lyase C-terminus JCR17_08790 PF00206 Lyase JCR17_08795 PF00561 alpha/beta hydrolase fold JCR17_08800 PF07690 Major Facilitator Superfamily JCR17_08805 PF02627 Carboxymuconolactone decarboxylase family JCR17_08810 PF00775 Dioxygenase JCR17_08810 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JCR17_08815 PF00775 Dioxygenase JCR17_08820 PF01487 Type I 3-dehydroquinase JCR17_08825 PF05048 Periplasmic copper-binding protein (NosD) JCR17_08830 PF04966 Carbohydrate-selective porin, OprB family JCR17_08835 PF13360 PQQ-like domain JCR17_08835 PF01011 PQQ enzyme repeat JCR17_08845 PF04143 Sulphur transport JCR17_08855 PF00753 Metallo-beta-lactamase superfamily JCR17_08860 PF01614 Bacterial transcriptional regulator JCR17_08860 PF09339 IclR helix-turn-helix domain JCR17_08865 PF03466 LysR substrate binding domain JCR17_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_08870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_08870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_08870 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_08885 PF00106 short chain dehydrogenase JCR17_08905 PF01425 Amidase JCR17_08910 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR17_08925 PF00355 Rieske [2Fe-2S] domain JCR17_08925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR17_08940 PF00175 Oxidoreductase NAD-binding domain JCR17_08940 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_08945 PF01613 Flavin reductase like domain JCR17_08950 PF02311 AraC-like ligand binding domain JCR17_08950 PF12833 Helix-turn-helix domain JCR17_08955 PF01179 Copper amine oxidase, enzyme domain JCR17_08955 PF07833 Copper amine oxidase N-terminal domain JCR17_08955 PF02728 Copper amine oxidase, N3 domain JCR17_08955 PF02727 Copper amine oxidase, N2 domain JCR17_08965 PF00171 Aldehyde dehydrogenase family JCR17_08970 PF01804 Penicillin amidase JCR17_08975 PF12146 Serine aminopeptidase, S33 JCR17_08980 PF00108 Thiolase, N-terminal domain JCR17_08980 PF02803 Thiolase, C-terminal domain JCR17_08985 PF01144 Coenzyme A transferase JCR17_08990 PF01144 Coenzyme A transferase JCR17_08995 PF00775 Dioxygenase JCR17_08995 PF04444 Catechol dioxygenase N terminus JCR17_09000 PF02426 Muconolactone delta-isomerase JCR17_09005 PF13378 Enolase C-terminal domain-like JCR17_09005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR17_09010 PF03466 LysR substrate binding domain JCR17_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09020 PF00392 Bacterial regulatory proteins, gntR family JCR17_09020 PF07729 FCD domain JCR17_09025 PF00920 Dehydratase family JCR17_09030 PF07690 Major Facilitator Superfamily JCR17_09040 PF00171 Aldehyde dehydrogenase family JCR17_09060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_09060 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_09060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_09070 PF06506 Propionate catabolism activator JCR17_09070 PF00158 Sigma-54 interaction domain JCR17_09070 PF02954 Bacterial regulatory protein, Fis family JCR17_09075 PF13193 AMP-binding enzyme C-terminal domain JCR17_09075 PF00501 AMP-binding enzyme JCR17_09080 PF04341 Protein of unknown function, DUF485 JCR17_09085 PF00474 Sodium:solute symporter family JCR17_09090 PF00107 Zinc-binding dehydrogenase JCR17_09090 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_09095 PF00171 Aldehyde dehydrogenase family JCR17_09105 PF00561 alpha/beta hydrolase fold JCR17_09110 PF00199 Catalase JCR17_09110 PF06628 Catalase-related immune-responsive JCR17_09125 PF07859 alpha/beta hydrolase fold JCR17_09130 PF01047 MarR family JCR17_09135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR17_09135 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_09140 PF00106 short chain dehydrogenase JCR17_09145 PF01872 RibD C-terminal domain JCR17_09150 PF00376 MerR family regulatory protein JCR17_09150 PF09278 MerR, DNA binding JCR17_09160 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_09170 PF12706 Beta-lactamase superfamily domain JCR17_09175 PF00440 Bacterial regulatory proteins, tetR family JCR17_09175 PF08359 YsiA-like protein, C-terminal region JCR17_09185 PF00857 Isochorismatase family JCR17_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09190 PF03466 LysR substrate binding domain JCR17_09195 PF07995 Glucose / Sorbosone dehydrogenase JCR17_09200 PF02254 TrkA-N domain JCR17_09200 PF00999 Sodium/hydrogen exchanger family JCR17_09210 PF07687 Peptidase dimerisation domain JCR17_09210 PF01546 Peptidase family M20/M25/M40 JCR17_09220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JCR17_09220 PF08479 POTRA domain, ShlB-type JCR17_09220 PF17287 POTRA domain JCR17_09225 PF04829 Pre-toxin domain with VENN motif JCR17_09225 PF05860 haemagglutination activity domain JCR17_09225 PF13018 Extended Signal Peptide of Type V secretion system JCR17_09225 PF13332 Hemagglutinin repeat JCR17_09240 PF07690 Major Facilitator Superfamily JCR17_09245 PF04909 Amidohydrolase JCR17_09255 PF07702 UTRA domain JCR17_09255 PF00392 Bacterial regulatory proteins, gntR family JCR17_09260 PF08450 SMP-30/Gluconolactonase/LRE-like region JCR17_09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09270 PF03466 LysR substrate binding domain JCR17_09290 PF07690 Major Facilitator Superfamily JCR17_09295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR17_09295 PF01842 ACT domain JCR17_09295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR17_09300 PF03737 Aldolase/RraA JCR17_09320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_09320 PF00529 HlyD membrane-fusion protein of T1SS JCR17_09335 PF00171 Aldehyde dehydrogenase family JCR17_09340 PF00920 Dehydratase family JCR17_09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09350 PF03466 LysR substrate binding domain JCR17_09355 PF01370 NAD dependent epimerase/dehydratase family JCR17_09360 PF07690 Major Facilitator Superfamily JCR17_09365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR17_09365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR17_09370 PF12833 Helix-turn-helix domain JCR17_09370 PF06719 AraC-type transcriptional regulator N-terminus JCR17_09385 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_09385 PF00107 Zinc-binding dehydrogenase JCR17_09395 PF01032 FecCD transport family JCR17_09400 PF00005 ABC transporter JCR17_09420 PF14572 Phosphoribosyl synthetase-associated domain JCR17_09420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR17_09425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR17_09495 PF00196 Bacterial regulatory proteins, luxR family JCR17_09500 PF01425 Amidase JCR17_09505 PF13533 Biotin-lipoyl like JCR17_09510 PF07690 Major Facilitator Superfamily JCR17_09535 PF01975 Survival protein SurE JCR17_09540 PF13737 Transposase DDE domain JCR17_09550 PF04607 Region found in RelA / SpoT proteins JCR17_09550 PF02824 TGS domain JCR17_09550 PF13291 ACT domain JCR17_09600 PF12146 Serine aminopeptidase, S33 JCR17_09605 PF12833 Helix-turn-helix domain JCR17_09605 PF02311 AraC-like ligand binding domain JCR17_09615 PF16527 Two-component sensor protein CpxA, periplasmic domain JCR17_09615 PF00672 HAMP domain JCR17_09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_09615 PF00512 His Kinase A (phospho-acceptor) domain JCR17_09620 PF00072 Response regulator receiver domain JCR17_09620 PF00486 Transcriptional regulatory protein, C terminal JCR17_09625 PF00529 HlyD membrane-fusion protein of T1SS JCR17_09625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_09630 PF00873 AcrB/AcrD/AcrF family JCR17_09635 PF02321 Outer membrane efflux protein JCR17_09640 PF12146 Serine aminopeptidase, S33 JCR17_09645 PF00743 Flavin-binding monooxygenase-like JCR17_09650 PF01593 Flavin containing amine oxidoreductase JCR17_09665 PF01266 FAD dependent oxidoreductase JCR17_09685 PF16970 Type-1 fimbrial protein, A JCR17_09695 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR17_09695 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR17_09700 PF00577 Outer membrane usher protein JCR17_09700 PF13954 PapC N-terminal domain JCR17_09700 PF13953 PapC C-terminal domain JCR17_09705 PF00419 Fimbrial protein JCR17_09715 PF00107 Zinc-binding dehydrogenase JCR17_09715 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_09725 PF00199 Catalase JCR17_09740 PF13091 PLD-like domain JCR17_09755 PF01244 Membrane dipeptidase (Peptidase family M19) JCR17_09760 PF04055 Radical SAM superfamily JCR17_09760 PF13186 Iron-sulfur cluster-binding domain JCR17_09765 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JCR17_09770 PF03070 TENA/THI-4/PQQC family JCR17_09775 PF12706 Beta-lactamase superfamily domain JCR17_09780 PF08042 PqqA family JCR17_09785 PF17941 Polyphosphate kinase C-terminal domain 1 JCR17_09785 PF13090 Polyphosphate kinase C-terminal domain 2 JCR17_09785 PF13089 Polyphosphate kinase N-terminal domain JCR17_09785 PF02503 Polyphosphate kinase middle domain JCR17_09790 PF00149 Calcineurin-like phosphoesterase JCR17_09800 PF00550 Phosphopantetheine attachment site JCR17_09800 PF00857 Isochorismatase family JCR17_09805 PF00106 short chain dehydrogenase JCR17_09810 PF00005 ABC transporter JCR17_09810 PF03459 TOBE domain JCR17_09815 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_09825 PF03459 TOBE domain JCR17_09825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09830 PF00355 Rieske [2Fe-2S] domain JCR17_09830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR17_09835 PF00866 Ring hydroxylating beta subunit JCR17_09840 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_09840 PF00970 Oxidoreductase FAD-binding domain JCR17_09840 PF00175 Oxidoreductase NAD-binding domain JCR17_09845 PF12833 Helix-turn-helix domain JCR17_09845 PF14525 AraC-binding-like domain JCR17_09855 PF01613 Flavin reductase like domain JCR17_09870 PF01738 Dienelactone hydrolase family JCR17_09875 PF07690 Major Facilitator Superfamily JCR17_09880 PF06719 AraC-type transcriptional regulator N-terminus JCR17_09880 PF12833 Helix-turn-helix domain JCR17_09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09905 PF03466 LysR substrate binding domain JCR17_09910 PF01144 Coenzyme A transferase JCR17_09915 PF01144 Coenzyme A transferase JCR17_09920 PF02667 Short chain fatty acid transporter JCR17_09925 PF02803 Thiolase, C-terminal domain JCR17_09925 PF00108 Thiolase, N-terminal domain JCR17_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09930 PF03466 LysR substrate binding domain JCR17_09935 PF03466 LysR substrate binding domain JCR17_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_09950 PF00206 Lyase JCR17_09950 PF10415 Fumarase C C-terminus JCR17_09955 PF07715 TonB-dependent Receptor Plug Domain JCR17_09955 PF00593 TonB dependent receptor JCR17_09960 PF00083 Sugar (and other) transporter JCR17_09975 PF00005 ABC transporter JCR17_09980 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_09985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR17_10000 PF00392 Bacterial regulatory proteins, gntR family JCR17_10000 PF07702 UTRA domain JCR17_10010 PF02525 Flavodoxin-like fold JCR17_10015 PF01638 HxlR-like helix-turn-helix JCR17_10020 PF12833 Helix-turn-helix domain JCR17_10020 PF06445 GyrI-like small molecule binding domain JCR17_10035 PF01925 Sulfite exporter TauE/SafE JCR17_10040 PF00753 Metallo-beta-lactamase superfamily JCR17_10040 PF04273 Putative phosphatase (DUF442) JCR17_10045 PF04273 Putative phosphatase (DUF442) JCR17_10045 PF00753 Metallo-beta-lactamase superfamily JCR17_10050 PF00158 Sigma-54 interaction domain JCR17_10050 PF02954 Bacterial regulatory protein, Fis family JCR17_10050 PF00072 Response regulator receiver domain JCR17_10055 PF01062 Bestrophin, RFP-TM, chloride channel JCR17_10060 PF00107 Zinc-binding dehydrogenase JCR17_10060 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_10065 PF00106 short chain dehydrogenase JCR17_10070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR17_10070 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_10075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR17_10075 PF00364 Biotin-requiring enzyme JCR17_10075 PF02817 e3 binding domain JCR17_10080 PF02779 Transketolase, pyrimidine binding domain JCR17_10080 PF02780 Transketolase, C-terminal domain JCR17_10085 PF00676 Dehydrogenase E1 component JCR17_10090 PF04055 Radical SAM superfamily JCR17_10105 PF00990 Diguanylate cyclase, GGDEF domain JCR17_10105 PF08448 PAS fold JCR17_10110 PF01264 Chorismate synthase JCR17_10115 PF05175 Methyltransferase small domain JCR17_10120 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_10130 PF17862 AAA+ lid domain JCR17_10130 PF01434 Peptidase family M41 JCR17_10130 PF00004 ATPase family associated with various cellular activities (AAA) JCR17_10140 PF05166 YcgL domain JCR17_10160 PF01612 3'-5' exonuclease JCR17_10160 PF00570 HRDC domain JCR17_10165 PF02132 RecR protein JCR17_10165 PF13662 Toprim domain JCR17_10170 PF02575 YbaB/EbfC DNA-binding family JCR17_10180 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR17_10185 PF00561 alpha/beta hydrolase fold JCR17_10190 PF08241 Methyltransferase domain JCR17_10220 PF01230 HIT domain JCR17_10255 PF00005 ABC transporter JCR17_10260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_10270 PF02684 Lipid-A-disaccharide synthetase JCR17_10275 PF00593 TonB dependent receptor JCR17_10275 PF07715 TonB-dependent Receptor Plug Domain JCR17_10295 PF01925 Sulfite exporter TauE/SafE JCR17_10300 PF00793 DAHP synthetase I family JCR17_10305 PF02654 Cobalamin-5-phosphate synthase JCR17_10320 PF02277 Phosphoribosyltransferase JCR17_10325 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JCR17_10335 PF13419 Haloacid dehalogenase-like hydrolase JCR17_10360 PF00593 TonB dependent receptor JCR17_10360 PF07715 TonB-dependent Receptor Plug Domain JCR17_10375 PF04183 IucA / IucC family JCR17_10375 PF06276 Ferric iron reductase FhuF-like transporter JCR17_10380 PF04183 IucA / IucC family JCR17_10380 PF06276 Ferric iron reductase FhuF-like transporter JCR17_10385 PF07690 Major Facilitator Superfamily JCR17_10390 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR17_10395 PF06276 Ferric iron reductase FhuF-like transporter JCR17_10395 PF04183 IucA / IucC family JCR17_10400 PF04073 Aminoacyl-tRNA editing domain JCR17_10410 PF03109 ABC1 family JCR17_10415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_10415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_10415 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_10420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_10420 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_10420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_10425 PF00487 Fatty acid desaturase JCR17_10430 PF12833 Helix-turn-helix domain JCR17_10430 PF12852 Cupin JCR17_10435 PF00639 PPIC-type PPIASE domain JCR17_10435 PF09312 SurA N-terminal domain JCR17_10440 PF00216 Bacterial DNA-binding protein JCR17_10455 PF02082 Transcriptional regulator JCR17_10460 PF00266 Aminotransferase class-V JCR17_10465 PF01592 NifU-like N terminal domain JCR17_10470 PF01521 Iron-sulphur cluster biosynthesis JCR17_10475 PF00226 DnaJ domain JCR17_10475 PF07743 HSCB C-terminal oligomerisation domain JCR17_10480 PF00012 Hsp70 protein JCR17_10485 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_10490 PF00211 Adenylate and Guanylate cyclase catalytic domain JCR17_10500 PF00271 Helicase conserved C-terminal domain JCR17_10500 PF02559 CarD-like/TRCF domain JCR17_10500 PF17757 UvrB interaction domain JCR17_10500 PF00270 DEAD/DEAH box helicase JCR17_10500 PF03461 TRCF domain JCR17_10520 PF03737 Aldolase/RraA JCR17_10525 PF13460 NAD(P)H-binding JCR17_10530 PF01649 Ribosomal protein S20 JCR17_10540 PF00459 Inositol monophosphatase family JCR17_10555 PF00005 ABC transporter JCR17_10555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR17_10560 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_10565 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_10570 PF01432 Peptidase family M3 JCR17_10590 PF07715 TonB-dependent Receptor Plug Domain JCR17_10590 PF00593 TonB dependent receptor JCR17_10600 PF01618 MotA/TolQ/ExbB proton channel family JCR17_10605 PF02472 Biopolymer transport protein ExbD/TolR JCR17_10610 PF02472 Biopolymer transport protein ExbD/TolR JCR17_10620 PF01274 Malate synthase JCR17_10625 PF03969 AFG1-like ATPase JCR17_10635 PF00743 Flavin-binding monooxygenase-like JCR17_10645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCR17_10655 PF00216 Bacterial DNA-binding protein JCR17_10660 PF00575 S1 RNA binding domain JCR17_10665 PF02224 Cytidylate kinase JCR17_10675 PF14437 MafB19-like deaminase JCR17_10685 PF03167 Uracil DNA glycosylase superfamily JCR17_10695 PF03934 Type II secretion system (T2SS), protein K JCR17_10700 PF11612 Type II secretion system (T2SS), protein J JCR17_10700 PF07963 Prokaryotic N-terminal methylation motif JCR17_10705 PF07963 Prokaryotic N-terminal methylation motif JCR17_10705 PF02501 Type II secretion system (T2SS), protein I JCR17_10720 PF01026 TatD related DNase JCR17_10730 PF09115 DNA polymerase III, delta subunit, C terminal JCR17_10735 PF02348 Cytidylyltransferase JCR17_10740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JCR17_10745 PF00664 ABC transporter transmembrane region JCR17_10745 PF00005 ABC transporter JCR17_10755 PF01618 MotA/TolQ/ExbB proton channel family JCR17_10760 PF17762 HTH domain found in ParB protein JCR17_10760 PF02195 ParB-like nuclease domain JCR17_10765 PF13614 AAA domain JCR17_10770 PF02527 rRNA small subunit methyltransferase G JCR17_10775 PF00483 Nucleotidyl transferase JCR17_10780 PF01636 Phosphotransferase enzyme family JCR17_10785 PF03968 OstA-like protein JCR17_10785 PF04453 LPS transport system D JCR17_10790 PF00639 PPIC-type PPIASE domain JCR17_10790 PF09312 SurA N-terminal domain JCR17_10795 PF01116 Fructose-bisphosphate aldolase class-II JCR17_10805 PF00162 Phosphoglycerate kinase JCR17_10815 PF02545 Maf-like protein JCR17_10820 PF08007 Cupin superfamily protein JCR17_10835 PF00375 Sodium:dicarboxylate symporter family JCR17_10840 PF06912 Protein of unknown function (DUF1275) JCR17_10845 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JCR17_10850 PF00664 ABC transporter transmembrane region JCR17_10850 PF00005 ABC transporter JCR17_10860 PF12833 Helix-turn-helix domain JCR17_10860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR17_10865 PF01597 Glycine cleavage H-protein JCR17_10870 PF02146 Sir2 family JCR17_10875 PF00474 Sodium:solute symporter family JCR17_10880 PF01037 Lrp/AsnC ligand binding domain JCR17_10885 PF14850 DNA-binding domain of Proline dehydrogenase JCR17_10885 PF01619 Proline dehydrogenase JCR17_10885 PF00171 Aldehyde dehydrogenase family JCR17_10885 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JCR17_10890 PF04229 GrpB protein JCR17_10895 PF05958 tRNA (Uracil-5-)-methyltransferase JCR17_10905 PF09992 Phosphodiester glycosidase JCR17_10915 PF04264 YceI-like domain JCR17_10925 PF00456 Transketolase, thiamine diphosphate binding domain JCR17_10925 PF02780 Transketolase, C-terminal domain JCR17_10925 PF02779 Transketolase, pyrimidine binding domain JCR17_10930 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCR17_10930 PF02772 S-adenosylmethionine synthetase, central domain JCR17_10930 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCR17_10950 PF00905 Penicillin binding protein transpeptidase domain JCR17_10965 PF02075 Crossover junction endodeoxyribonuclease RuvC JCR17_10970 PF03853 YjeF-related protein N-terminus JCR17_10970 PF01256 Carbohydrate kinase JCR17_10975 PF08331 Domain of unknown function (DUF1730) JCR17_10980 PF06968 Biotin and Thiamin Synthesis associated domain JCR17_10980 PF04055 Radical SAM superfamily JCR17_10995 PF16970 Type-1 fimbrial protein, A JCR17_11000 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR17_11000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR17_11005 PF00577 Outer membrane usher protein JCR17_11005 PF13954 PapC N-terminal domain JCR17_11005 PF13953 PapC C-terminal domain JCR17_11025 PF00892 EamA-like transporter family JCR17_11035 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR17_11045 PF13737 Transposase DDE domain JCR17_11055 PF03466 LysR substrate binding domain JCR17_11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11075 PF00440 Bacterial regulatory proteins, tetR family JCR17_11085 PF01709 Transcriptional regulator JCR17_11095 PF01037 Lrp/AsnC ligand binding domain JCR17_11105 PF00005 ABC transporter JCR17_11110 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11115 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR17_11130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_11140 PF00296 Luciferase-like monooxygenase JCR17_11145 PF03180 NLPA lipoprotein JCR17_11150 PF03180 NLPA lipoprotein JCR17_11155 PF00005 ABC transporter JCR17_11155 PF09383 NIL domain JCR17_11160 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11165 PF06071 Protein of unknown function (DUF933) JCR17_11165 PF01926 50S ribosome-binding GTPase JCR17_11190 PF03591 AzlC protein JCR17_11195 PF05437 Branched-chain amino acid transport protein (AzlD) JCR17_11205 PF02222 ATP-grasp domain JCR17_11210 PF08335 GlnD PII-uridylyltransferase JCR17_11210 PF01966 HD domain JCR17_11210 PF01909 Nucleotidyltransferase domain JCR17_11215 PF00155 Aminotransferase class I and II JCR17_11225 PF12833 Helix-turn-helix domain JCR17_11225 PF12852 Cupin JCR17_11230 PF00255 Glutathione peroxidase JCR17_11235 PF01641 SelR domain JCR17_11240 PF00155 Aminotransferase class I and II JCR17_11245 PF00375 Sodium:dicarboxylate symporter family JCR17_11250 PF00710 Asparaginase, N-terminal JCR17_11250 PF17763 Glutaminase/Asparaginase C-terminal domain JCR17_11255 PF02811 PHP domain JCR17_11255 PF01336 OB-fold nucleic acid binding domain JCR17_11255 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCR17_11255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCR17_11255 PF14579 Helix-hairpin-helix motif JCR17_11260 PF00588 SpoU rRNA Methylase family JCR17_11265 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_11280 PF13192 Thioredoxin domain JCR17_11280 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_11295 PF03466 LysR substrate binding domain JCR17_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11300 PF01758 Sodium Bile acid symporter family JCR17_11305 PF01022 Bacterial regulatory protein, arsR family JCR17_11310 PF03960 ArsC family JCR17_11320 PF13382 Adenine deaminase C-terminal domain JCR17_11320 PF01979 Amidohydrolase family JCR17_11330 PF03466 LysR substrate binding domain JCR17_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11340 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR17_11345 PF01177 Asp/Glu/Hydantoin racemase JCR17_11350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JCR17_11355 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11360 PF00005 ABC transporter JCR17_11365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR17_11375 PF00083 Sugar (and other) transporter JCR17_11380 PF00296 Luciferase-like monooxygenase JCR17_11385 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_11385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_11385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR17_11395 PF01654 Cytochrome bd terminal oxidase subunit I JCR17_11400 PF02322 Cytochrome bd terminal oxidase subunit II JCR17_11410 PF00392 Bacterial regulatory proteins, gntR family JCR17_11410 PF00155 Aminotransferase class I and II JCR17_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11415 PF03466 LysR substrate binding domain JCR17_11430 PF00698 Acyl transferase domain JCR17_11435 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCR17_11445 PF01039 Carboxyl transferase domain JCR17_11450 PF06857 Malonate decarboxylase delta subunit (MdcD) JCR17_11455 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCR17_11460 PF16957 Malonate decarboxylase, alpha subunit, transporter JCR17_11465 PF07690 Major Facilitator Superfamily JCR17_11480 PF00392 Bacterial regulatory proteins, gntR family JCR17_11480 PF00155 Aminotransferase class I and II JCR17_11485 PF04172 LrgB-like family JCR17_11490 PF03788 LrgA family JCR17_11495 PF03466 LysR substrate binding domain JCR17_11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11500 PF02798 Glutathione S-transferase, N-terminal domain JCR17_11500 PF14834 Glutathione S-transferase, C-terminal domain JCR17_11505 PF02798 Glutathione S-transferase, N-terminal domain JCR17_11510 PF03466 LysR substrate binding domain JCR17_11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11520 PF00581 Rhodanese-like domain JCR17_11525 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_11535 PF00266 Aminotransferase class-V JCR17_11545 PF01810 LysE type translocator JCR17_11550 PF03466 LysR substrate binding domain JCR17_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11560 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR17_11565 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR17_11570 PF00005 ABC transporter JCR17_11575 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11580 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11595 PF00072 Response regulator receiver domain JCR17_11600 PF00072 Response regulator receiver domain JCR17_11600 PF09308 LuxQ, periplasmic JCR17_11600 PF00512 His Kinase A (phospho-acceptor) domain JCR17_11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_11610 PF01037 Lrp/AsnC ligand binding domain JCR17_11610 PF13404 AsnC-type helix-turn-helix domain JCR17_11620 PF00717 Peptidase S24-like JCR17_11645 PF00199 Catalase JCR17_11645 PF18011 C-terminal domain found in long catalases JCR17_11645 PF06628 Catalase-related immune-responsive JCR17_11655 PF02464 Competence-damaged protein JCR17_11655 PF18146 Damage-inducible protein CinA KH domain JCR17_11655 PF00994 Probable molybdopterin binding domain JCR17_11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11690 PF03466 LysR substrate binding domain JCR17_11710 PF13193 AMP-binding enzyme C-terminal domain JCR17_11710 PF00501 AMP-binding enzyme JCR17_11715 PF00440 Bacterial regulatory proteins, tetR family JCR17_11720 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_11720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_11720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_11725 PF01039 Carboxyl transferase domain JCR17_11730 PF00378 Enoyl-CoA hydratase/isomerase JCR17_11735 PF02785 Biotin carboxylase C-terminal domain JCR17_11735 PF18140 Propionyl-coenzyme A carboxylase BT domain JCR17_11735 PF00289 Biotin carboxylase, N-terminal domain JCR17_11735 PF00364 Biotin-requiring enzyme JCR17_11735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR17_11740 PF00682 HMGL-like JCR17_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11745 PF03466 LysR substrate binding domain JCR17_11760 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_11760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_11760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_11760 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR17_11770 PF07690 Major Facilitator Superfamily JCR17_11780 PF01144 Coenzyme A transferase JCR17_11785 PF01144 Coenzyme A transferase JCR17_11790 PF07690 Major Facilitator Superfamily JCR17_11795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_11795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_11795 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_11800 PF00378 Enoyl-CoA hydratase/isomerase JCR17_11810 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR17_11810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR17_11810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR17_11815 PF02803 Thiolase, C-terminal domain JCR17_11815 PF00108 Thiolase, N-terminal domain JCR17_11820 PF09339 IclR helix-turn-helix domain JCR17_11825 PF07690 Major Facilitator Superfamily JCR17_11830 PF03060 Nitronate monooxygenase JCR17_11835 PF00378 Enoyl-CoA hydratase/isomerase JCR17_11840 PF09339 IclR helix-turn-helix domain JCR17_11845 PF02515 CoA-transferase family III JCR17_11850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_11850 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_11850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_11855 PF07690 Major Facilitator Superfamily JCR17_11860 PF13419 Haloacid dehalogenase-like hydrolase JCR17_11865 PF00266 Aminotransferase class-V JCR17_11870 PF01266 FAD dependent oxidoreductase JCR17_11875 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_11880 PF00005 ABC transporter JCR17_11880 PF08402 TOBE domain JCR17_11890 PF07702 UTRA domain JCR17_11890 PF00392 Bacterial regulatory proteins, gntR family JCR17_11895 PF01494 FAD binding domain JCR17_11900 PF09339 IclR helix-turn-helix domain JCR17_11900 PF01614 Bacterial transcriptional regulator JCR17_11905 PF02525 Flavodoxin-like fold JCR17_11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_11910 PF03466 LysR substrate binding domain JCR17_11915 PF02627 Carboxymuconolactone decarboxylase family JCR17_11920 PF00171 Aldehyde dehydrogenase family JCR17_11930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR17_11940 PF00171 Aldehyde dehydrogenase family JCR17_11945 PF00296 Luciferase-like monooxygenase JCR17_11950 PF01613 Flavin reductase like domain JCR17_11955 PF12697 Alpha/beta hydrolase family JCR17_11975 PF01292 Prokaryotic cytochrome b561 JCR17_11980 PF00199 Catalase JCR17_12015 PF03061 Thioesterase superfamily JCR17_12020 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_12025 PF07848 PaaX-like protein JCR17_12025 PF08223 PaaX-like protein C-terminal domain JCR17_12030 PF14535 AMP-binding enzyme C-terminal domain JCR17_12030 PF00501 AMP-binding enzyme JCR17_12035 PF00108 Thiolase, N-terminal domain JCR17_12035 PF02803 Thiolase, C-terminal domain JCR17_12040 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR17_12040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR17_12040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR17_12045 PF00378 Enoyl-CoA hydratase/isomerase JCR17_12050 PF00378 Enoyl-CoA hydratase/isomerase JCR17_12055 PF00175 Oxidoreductase NAD-binding domain JCR17_12055 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_12055 PF00970 Oxidoreductase FAD-binding domain JCR17_12060 PF01883 Iron-sulfur cluster assembly protein JCR17_12065 PF05138 Phenylacetic acid catabolic protein JCR17_12070 PF06243 Phenylacetic acid degradation B JCR17_12075 PF05138 Phenylacetic acid catabolic protein JCR17_12080 PF01575 MaoC like domain JCR17_12080 PF00171 Aldehyde dehydrogenase family JCR17_12085 PF03313 Serine dehydratase alpha chain JCR17_12085 PF03315 Serine dehydratase beta chain JCR17_12090 PF13520 Amino acid permease JCR17_12095 PF00171 Aldehyde dehydrogenase family JCR17_12100 PF00083 Sugar (and other) transporter JCR17_12110 PF04324 BFD-like [2Fe-2S] binding domain JCR17_12110 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_12120 PF01266 FAD dependent oxidoreductase JCR17_12125 PF05544 Proline racemase JCR17_12130 PF00392 Bacterial regulatory proteins, gntR family JCR17_12140 PF00701 Dihydrodipicolinate synthetase family JCR17_12150 PF00376 MerR family regulatory protein JCR17_12150 PF09278 MerR, DNA binding JCR17_12170 PF00005 ABC transporter JCR17_12175 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR17_12180 PF01425 Amidase JCR17_12185 PF01402 Ribbon-helix-helix protein, copG family JCR17_12185 PF08753 NikR C terminal nickel binding domain JCR17_12205 PF02525 Flavodoxin-like fold JCR17_12210 PF02785 Biotin carboxylase C-terminal domain JCR17_12210 PF00289 Biotin carboxylase, N-terminal domain JCR17_12210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR17_12225 PF13823 Alcohol dehydrogenase GroES-associated JCR17_12225 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_12225 PF00107 Zinc-binding dehydrogenase JCR17_12235 PF00440 Bacterial regulatory proteins, tetR family JCR17_12255 PF00654 Voltage gated chloride channel JCR17_12260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR17_12260 PF00364 Biotin-requiring enzyme JCR17_12260 PF02785 Biotin carboxylase C-terminal domain JCR17_12260 PF00289 Biotin carboxylase, N-terminal domain JCR17_12270 PF07286 Protein of unknown function (DUF1445) JCR17_12275 PF03746 LamB/YcsF family JCR17_12280 PF01566 Natural resistance-associated macrophage protein JCR17_12285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_12285 PF03466 LysR substrate binding domain JCR17_12300 PF05593 RHS Repeat JCR17_12300 PF03527 RHS protein JCR17_12305 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR17_12305 PF04717 Type VI secretion system, phage-baseplate injector JCR17_12305 PF13296 Putative type VI secretion system Rhs element Vgr JCR17_12315 PF13419 Haloacid dehalogenase-like hydrolase JCR17_12335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR17_12335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR17_12355 PF07690 Major Facilitator Superfamily JCR17_12365 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR17_12370 PF03707 Bacterial signalling protein N terminal repeat JCR17_12370 PF00990 Diguanylate cyclase, GGDEF domain JCR17_12370 PF00563 EAL domain JCR17_12375 PF00892 EamA-like transporter family JCR17_12380 PF01037 Lrp/AsnC ligand binding domain JCR17_12385 PF05190 MutS family domain IV JCR17_12385 PF00488 MutS domain V JCR17_12385 PF05192 MutS domain III JCR17_12385 PF05188 MutS domain II JCR17_12385 PF01624 MutS domain I JCR17_12395 PF11953 Domain of unknown function (DUF3470) JCR17_12395 PF00037 4Fe-4S binding domain JCR17_12405 PF01596 O-methyltransferase JCR17_12415 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_12420 PF01205 Uncharacterized protein family UPF0029 JCR17_12430 PF03412 Peptidase C39 family JCR17_12430 PF00005 ABC transporter JCR17_12430 PF00664 ABC transporter transmembrane region JCR17_12435 PF02321 Outer membrane efflux protein JCR17_12440 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCR17_12440 PF00005 ABC transporter JCR17_12445 PF03968 OstA-like protein JCR17_12460 PF01380 SIS domain JCR17_12460 PF00571 CBS domain JCR17_12465 PF01406 tRNA synthetases class I (C) catalytic domain JCR17_12465 PF09190 DALR domain JCR17_12490 PF13737 Transposase DDE domain JCR17_12495 PF01638 HxlR-like helix-turn-helix JCR17_12500 PF07690 Major Facilitator Superfamily JCR17_12525 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR17_12525 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR17_12535 PF00313 'Cold-shock' DNA-binding domain JCR17_12540 PF01810 LysE type translocator JCR17_12570 PF13742 OB-fold nucleic acid binding domain JCR17_12570 PF02601 Exonuclease VII, large subunit JCR17_12605 PF00376 MerR family regulatory protein JCR17_12605 PF09278 MerR, DNA binding JCR17_12610 PF00403 Heavy-metal-associated domain JCR17_12615 PF00403 Heavy-metal-associated domain JCR17_12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_12620 PF03466 LysR substrate binding domain JCR17_12625 PF00355 Rieske [2Fe-2S] domain JCR17_12625 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR17_12630 PF00866 Ring hydroxylating beta subunit JCR17_12635 PF00175 Oxidoreductase NAD-binding domain JCR17_12635 PF00970 Oxidoreductase FAD-binding domain JCR17_12635 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_12640 PF00106 short chain dehydrogenase JCR17_12645 PF03594 Benzoate membrane transport protein JCR17_12650 PF07690 Major Facilitator Superfamily JCR17_12660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCR17_12660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCR17_12665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JCR17_12665 PF00271 Helicase conserved C-terminal domain JCR17_12665 PF04408 Helicase associated domain (HA2) JCR17_12665 PF00270 DEAD/DEAH box helicase JCR17_12665 PF11898 Domain of unknown function (DUF3418) JCR17_12670 PF00578 AhpC/TSA family JCR17_12670 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR17_12690 PF13192 Thioredoxin domain JCR17_12690 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_12700 PF02798 Glutathione S-transferase, N-terminal domain JCR17_12700 PF00043 Glutathione S-transferase, C-terminal domain JCR17_12710 PF02390 Putative methyltransferase JCR17_12715 PF13417 Glutathione S-transferase, N-terminal domain JCR17_12715 PF00043 Glutathione S-transferase, C-terminal domain JCR17_12725 PF00691 OmpA family JCR17_12725 PF13488 Glycine zipper JCR17_12730 PF01979 Amidohydrolase family JCR17_12735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR17_12735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR17_12745 PF02926 THUMP domain JCR17_12745 PF01170 Putative RNA methylase family UPF0020 JCR17_12745 PF10672 S-adenosylmethionine-dependent methyltransferase JCR17_12760 PF10431 C-terminal, D2-small domain, of ClpB protein JCR17_12760 PF02861 Clp amino terminal domain, pathogenicity island component JCR17_12760 PF17871 AAA lid domain JCR17_12760 PF00004 ATPase family associated with various cellular activities (AAA) JCR17_12760 PF07724 AAA domain (Cdc48 subfamily) JCR17_12775 PF02566 OsmC-like protein JCR17_12785 PF13545 Crp-like helix-turn-helix domain JCR17_12785 PF00027 Cyclic nucleotide-binding domain JCR17_12795 PF00248 Aldo/keto reductase family JCR17_12810 PF00709 Adenylosuccinate synthetase JCR17_12815 PF13393 Histidyl-tRNA synthetase JCR17_12820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR17_12820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR17_12825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR17_12825 PF01411 tRNA synthetases class II (A) JCR17_12825 PF02272 DHHA1 domain JCR17_12830 PF01842 ACT domain JCR17_12830 PF00696 Amino acid kinase family JCR17_12830 PF13840 ACT domain JCR17_12835 PF02599 Global regulator protein family JCR17_12840 PF01351 Ribonuclease HII JCR17_12850 PF01292 Prokaryotic cytochrome b561 JCR17_12855 PF00962 Adenosine/AMP deaminase JCR17_12860 PF00860 Permease family JCR17_12870 PF00743 Flavin-binding monooxygenase-like JCR17_12875 PF00106 short chain dehydrogenase JCR17_12885 PF17954 Quercetinase C-terminal cupin domain JCR17_12885 PF02678 Pirin JCR17_12890 PF00440 Bacterial regulatory proteins, tetR family JCR17_12890 PF17932 Tetracyclin repressor-like, C-terminal domain JCR17_12900 PF00106 short chain dehydrogenase JCR17_12910 PF13610 DDE domain JCR17_12920 PF04717 Type VI secretion system, phage-baseplate injector JCR17_12920 PF13296 Putative type VI secretion system Rhs element Vgr JCR17_12920 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR17_12940 PF13737 Transposase DDE domain JCR17_12945 PF03180 NLPA lipoprotein JCR17_12950 PF05987 Bacterial protein of unknown function (DUF898) JCR17_12965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR17_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_12970 PF00764 Arginosuccinate synthase JCR17_12975 PF01590 GAF domain JCR17_12975 PF00990 Diguanylate cyclase, GGDEF domain JCR17_12975 PF00360 Phytochrome region JCR17_12975 PF00563 EAL domain JCR17_12980 PF01979 Amidohydrolase family JCR17_12985 PF00929 Exonuclease JCR17_12995 PF00593 TonB dependent receptor JCR17_12995 PF07715 TonB-dependent Receptor Plug Domain JCR17_13000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR17_13000 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_13005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR17_13005 PF00005 ABC transporter JCR17_13010 PF12911 N-terminal TM domain of oligopeptide transport permease C JCR17_13010 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_13015 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_13020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCR17_13025 PF01476 LysM domain JCR17_13025 PF01464 Transglycosylase SLT domain JCR17_13025 PF01464 Transglycosylase SLT domain JCR17_13025 PF01476 LysM domain JCR17_13030 PF00929 Exonuclease JCR17_13040 PF00293 NUDIX domain JCR17_13040 PF09297 NADH pyrophosphatase zinc ribbon domain JCR17_13050 PF04972 BON domain JCR17_13055 PF02021 Uncharacterised protein family UPF0102 JCR17_13060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR17_13070 PF03466 LysR substrate binding domain JCR17_13070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_13075 PF01810 LysE type translocator JCR17_13085 PF13411 MerR HTH family regulatory protein JCR17_13095 PF01494 FAD binding domain JCR17_13100 PF01494 FAD binding domain JCR17_13105 PF05195 Aminopeptidase P, N-terminal domain JCR17_13105 PF00557 Metallopeptidase family M24 JCR17_13145 PF00884 Sulfatase JCR17_13145 PF08019 Phosphoethanolamine transferase EptA/EptB JCR17_13150 PF13737 Transposase DDE domain JCR17_13160 PF13737 Transposase DDE domain JCR17_13205 PF01551 Peptidase family M23 JCR17_13205 PF08525 Opacity-associated protein A N-terminal motif JCR17_13205 PF01476 LysM domain JCR17_13530 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCR17_13535 PF04355 SmpA / OmlA family JCR17_13535 PF00691 OmpA family JCR17_13540 PF05662 Coiled stalk of trimeric autotransporter adhesin JCR17_13540 PF05658 Head domain of trimeric autotransporter adhesin JCR17_13540 PF03895 YadA-like membrane anchor domain JCR17_13540 PF13018 Extended Signal Peptide of Type V secretion system JCR17_13545 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCR17_13545 PF00004 ATPase family associated with various cellular activities (AAA) JCR17_13545 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR17_13550 PF02590 Predicted SPOUT methyltransferase JCR17_13555 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JCR17_13565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR17_13565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR17_13570 PF04060 Putative Fe-S cluster JCR17_13575 PF10576 Iron-sulfur binding domain of endonuclease III JCR17_13575 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR17_13575 PF00633 Helix-hairpin-helix motif JCR17_13585 PF05191 Adenylate kinase, active site lid JCR17_13600 PF00905 Penicillin binding protein transpeptidase domain JCR17_13600 PF03717 Penicillin-binding Protein dimerisation domain JCR17_13615 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR17_13620 PF01730 UreF JCR17_13625 PF02814 UreE urease accessory protein, N-terminal domain JCR17_13625 PF05194 UreE urease accessory protein, C-terminal domain JCR17_13635 PF00547 Urease, gamma subunit JCR17_13640 PF01774 UreD urease accessory protein JCR17_13655 PF00463 Isocitrate lyase family JCR17_13660 PF03466 LysR substrate binding domain JCR17_13660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_13665 PF01595 Cyclin M transmembrane N-terminal domain JCR17_13665 PF03471 Transporter associated domain JCR17_13665 PF00571 CBS domain JCR17_13670 PF03600 Citrate transporter JCR17_13685 PF00009 Elongation factor Tu GTP binding domain JCR17_13690 PF01507 Phosphoadenosine phosphosulfate reductase family JCR17_13700 PF14052 Capsule assembly protein Wzi JCR17_13705 PF00152 tRNA synthetases class II (D, K and N) JCR17_13705 PF01336 OB-fold nucleic acid binding domain JCR17_13720 PF00301 Rubredoxin JCR17_13725 PF18113 Rubredoxin binding C-terminal domain JCR17_13725 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_13730 PF00561 alpha/beta hydrolase fold JCR17_13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_13735 PF03466 LysR substrate binding domain JCR17_13745 PF13089 Polyphosphate kinase N-terminal domain JCR17_13745 PF02503 Polyphosphate kinase middle domain JCR17_13745 PF13090 Polyphosphate kinase C-terminal domain 2 JCR17_13745 PF17941 Polyphosphate kinase C-terminal domain 1 JCR17_13750 PF00912 Transglycosylase JCR17_13755 PF01694 Rhomboid family JCR17_13765 PF00005 ABC transporter JCR17_13770 PF13472 GDSL-like Lipase/Acylhydrolase family JCR17_13775 PF00484 Carbonic anhydrase JCR17_13780 PF00561 alpha/beta hydrolase fold JCR17_13790 PF07715 TonB-dependent Receptor Plug Domain JCR17_13790 PF00593 TonB dependent receptor JCR17_13795 PF01106 NifU-like domain JCR17_13795 PF01521 Iron-sulphur cluster biosynthesis JCR17_13805 PF00884 Sulfatase JCR17_13810 PF03781 Sulfatase-modifying factor enzyme 1 JCR17_13825 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_13830 PF01384 Phosphate transporter family JCR17_13835 PF02607 B12 binding domain JCR17_13835 PF02574 Homocysteine S-methyltransferase JCR17_13835 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCR17_13835 PF00809 Pterin binding enzyme JCR17_13835 PF02310 B12 binding domain JCR17_13840 PF02779 Transketolase, pyrimidine binding domain JCR17_13840 PF02780 Transketolase, C-terminal domain JCR17_13845 PF00456 Transketolase, thiamine diphosphate binding domain JCR17_13850 PF07690 Major Facilitator Superfamily JCR17_13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_13860 PF03466 LysR substrate binding domain JCR17_13870 PF01263 Aldose 1-epimerase JCR17_13875 PF07690 Major Facilitator Superfamily JCR17_13880 PF12833 Helix-turn-helix domain JCR17_13880 PF02311 AraC-like ligand binding domain JCR17_13885 PF04960 Glutaminase JCR17_13890 PF01327 Polypeptide deformylase JCR17_13895 PF07690 Major Facilitator Superfamily JCR17_13905 PF00205 Thiamine pyrophosphate enzyme, central domain JCR17_13905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR17_13905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR17_13910 PF00171 Aldehyde dehydrogenase family JCR17_13915 PF01958 Domain of unknown function DUF108 JCR17_13915 PF03447 Homoserine dehydrogenase, NAD binding domain JCR17_13925 PF12697 Alpha/beta hydrolase family JCR17_13935 PF07690 Major Facilitator Superfamily JCR17_13940 PF14759 Reductase C-terminal JCR17_13940 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_13945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR17_13955 PF00355 Rieske [2Fe-2S] domain JCR17_13965 PF00355 Rieske [2Fe-2S] domain JCR17_13970 PF09339 IclR helix-turn-helix domain JCR17_13970 PF01614 Bacterial transcriptional regulator JCR17_13985 PF00378 Enoyl-CoA hydratase/isomerase JCR17_13995 PF00535 Glycosyl transferase family 2 JCR17_14000 PF01522 Polysaccharide deacetylase JCR17_14000 PF14883 Hypothetical glycosyl hydrolase family 13 JCR17_14005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR17_14010 PF07152 YaeQ protein JCR17_14015 PF00375 Sodium:dicarboxylate symporter family JCR17_14020 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR17_14020 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR17_14030 PF03061 Thioesterase superfamily JCR17_14040 PF02028 BCCT, betaine/carnitine/choline family transporter JCR17_14045 PF02028 BCCT, betaine/carnitine/choline family transporter JCR17_14050 PF13977 BetI-type transcriptional repressor, C-terminal JCR17_14050 PF00440 Bacterial regulatory proteins, tetR family JCR17_14055 PF00171 Aldehyde dehydrogenase family JCR17_14060 PF05199 GMC oxidoreductase JCR17_14060 PF00732 GMC oxidoreductase JCR17_14065 PF06039 Malate:quinone oxidoreductase (Mqo) JCR17_14075 PF02574 Homocysteine S-methyltransferase JCR17_14080 PF13520 Amino acid permease JCR17_14105 PF01126 Heme oxygenase JCR17_14125 PF07715 TonB-dependent Receptor Plug Domain JCR17_14125 PF00593 TonB dependent receptor JCR17_14135 PF08281 Sigma-70, region 4 JCR17_14135 PF04542 Sigma-70 region 2 JCR17_14145 PF00701 Dihydrodipicolinate synthetase family JCR17_14150 PF00083 Sugar (and other) transporter JCR17_14280 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR17_14280 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR17_14280 PF02767 DNA polymerase III beta subunit, central domain JCR17_14320 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JCR17_14525 PF01695 IstB-like ATP binding protein JCR17_14535 PF01555 DNA methylase JCR17_14590 PF01381 Helix-turn-helix JCR17_14660 PF13737 Transposase DDE domain JCR17_14695 PF07690 Major Facilitator Superfamily JCR17_14700 PF13533 Biotin-lipoyl like JCR17_14705 PF03061 Thioesterase superfamily JCR17_14710 PF00490 Delta-aminolevulinic acid dehydratase JCR17_14715 PF01266 FAD dependent oxidoreductase JCR17_14720 PF08338 Domain of unknown function (DUF1731) JCR17_14720 PF01370 NAD dependent epimerase/dehydratase family JCR17_14740 PF00149 Calcineurin-like phosphoesterase JCR17_14740 PF12320 Type 5 capsule protein repressor C-terminal domain JCR17_14750 PF01168 Alanine racemase, N-terminal domain JCR17_14755 PF00437 Type II/IV secretion system protein JCR17_14760 PF00437 Type II/IV secretion system protein JCR17_14765 PF01475 Ferric uptake regulator family JCR17_14770 PF04355 SmpA / OmlA family JCR17_14775 PF03658 RnfH family Ubiquitin JCR17_14785 PF01814 Hemerythrin HHE cation binding domain JCR17_14790 PF13230 Glutamine amidotransferases class-II JCR17_14800 PF00696 Amino acid kinase family JCR17_14805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR17_14805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR17_14805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR17_14805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR17_14810 PF00692 dUTPase JCR17_14815 PF13361 UvrD-like helicase C-terminal domain JCR17_14815 PF00580 UvrD/REP helicase N-terminal domain JCR17_14820 PF13488 Glycine zipper JCR17_14820 PF00691 OmpA family JCR17_14825 PF01553 Acyltransferase JCR17_14835 PF03775 Septum formation inhibitor MinC, C-terminal domain JCR17_14840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCR17_14845 PF03776 Septum formation topological specificity factor MinE JCR17_14865 PF01810 LysE type translocator JCR17_14870 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JCR17_14870 PF17854 FtsK alpha domain JCR17_14870 PF09397 Ftsk gamma domain JCR17_14870 PF01580 FtsK/SpoIIIE family JCR17_14875 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR17_14880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JCR17_14885 PF04376 Arginine-tRNA-protein transferase, N terminus JCR17_14885 PF04377 Arginine-tRNA-protein transferase, C terminus JCR17_14890 PF00583 Acetyltransferase (GNAT) family JCR17_14910 PF03144 Elongation factor Tu domain 2 JCR17_14910 PF03143 Elongation factor Tu C-terminal domain JCR17_14910 PF00009 Elongation factor Tu GTP binding domain JCR17_14915 PF00679 Elongation factor G C-terminus JCR17_14915 PF14492 Elongation Factor G, domain II JCR17_14915 PF03764 Elongation factor G, domain IV JCR17_14915 PF03144 Elongation factor Tu domain 2 JCR17_14915 PF00009 Elongation factor Tu GTP binding domain JCR17_14920 PF00177 Ribosomal protein S7p/S5e JCR17_14925 PF00164 Ribosomal protein S12/S23 JCR17_14935 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_14935 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_14940 PF03653 Uncharacterised protein family (UPF0093) JCR17_14945 PF05726 Pirin C-terminal cupin domain JCR17_14945 PF02678 Pirin JCR17_14955 PF00795 Carbon-nitrogen hydrolase JCR17_14955 PF02540 NAD synthase JCR17_14970 PF00175 Oxidoreductase NAD-binding domain JCR17_14970 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR17_14970 PF00970 Oxidoreductase FAD-binding domain JCR17_14975 PF00171 Aldehyde dehydrogenase family JCR17_14980 PF00355 Rieske [2Fe-2S] domain JCR17_14980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR17_14985 PF07859 alpha/beta hydrolase fold JCR17_14990 PF02028 BCCT, betaine/carnitine/choline family transporter JCR17_14995 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR17_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_15000 PF03466 LysR substrate binding domain JCR17_15020 PF00037 4Fe-4S binding domain JCR17_15025 PF01467 Cytidylyltransferase-like JCR17_15030 PF01668 SmpB protein JCR17_15035 PF03358 NADPH-dependent FMN reductase JCR17_15040 PF02578 Multi-copper polyphenol oxidoreductase laccase JCR17_15045 PF01479 S4 domain JCR17_15045 PF00849 RNA pseudouridylate synthase JCR17_15050 PF13525 Outer membrane lipoprotein JCR17_15055 PF01807 CHC2 zinc finger JCR17_15055 PF10410 DnaB-helicase binding domain of primase JCR17_15055 PF08278 DNA primase DnaG DnaB-binding JCR17_15055 PF08275 DNA primase catalytic core, N-terminal domain JCR17_15060 PF01488 Shikimate / quinate 5-dehydrogenase JCR17_15060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JCR17_15060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JCR17_15070 PF03550 Outer membrane lipoprotein LolB JCR17_15075 PF00288 GHMP kinases N terminal domain JCR17_15075 PF08544 GHMP kinases C terminal JCR17_15100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR17_15100 PF14572 Phosphoribosyl synthetase-associated domain JCR17_15105 PF01386 Ribosomal L25p family JCR17_15110 PF01195 Peptidyl-tRNA hydrolase JCR17_15115 PF02261 Aspartate decarboxylase JCR17_15130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR17_15140 PF03070 TENA/THI-4/PQQC family JCR17_15140 PF08543 Phosphomethylpyrimidine kinase JCR17_15140 PF02581 Thiamine monophosphate synthase JCR17_15145 PF04972 BON domain JCR17_15145 PF01476 LysM domain JCR17_15150 PF00550 Phosphopantetheine attachment site JCR17_15160 PF00698 Acyl transferase domain JCR17_15165 PF01783 Ribosomal L32p protein family JCR17_15170 PF02620 Large ribosomal RNA subunit accumulation protein YceD JCR17_15175 PF04315 Elongation factor P hydroxylase JCR17_15180 PF01300 Telomere recombination JCR17_15185 PF02616 Segregation and condensation protein ScpA JCR17_15190 PF04079 Segregation and condensation complex subunit ScpB JCR17_15195 PF00849 RNA pseudouridylate synthase JCR17_15195 PF01479 S4 domain JCR17_15210 PF00155 Aminotransferase class I and II JCR17_15215 PF06968 Biotin and Thiamin Synthesis associated domain JCR17_15215 PF04055 Radical SAM superfamily JCR17_15215 PF00202 Aminotransferase class-III JCR17_15220 PF12697 Alpha/beta hydrolase family JCR17_15220 PF08241 Methyltransferase domain JCR17_15225 PF02358 Trehalose-phosphatase JCR17_15230 PF00982 Glycosyltransferase family 20 JCR17_15235 PF07690 Major Facilitator Superfamily JCR17_15240 PF00210 Ferritin-like domain JCR17_15245 PF01653 NAD-dependent DNA ligase adenylation domain JCR17_15245 PF03120 NAD-dependent DNA ligase OB-fold domain JCR17_15245 PF12826 Helix-hairpin-helix motif JCR17_15245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCR17_15245 PF00533 BRCA1 C Terminus (BRCT) domain JCR17_15255 PF06470 SMC proteins Flexible Hinge Domain JCR17_15255 PF02463 RecF/RecN/SMC N terminal domain JCR17_15265 PF01925 Sulfite exporter TauE/SafE JCR17_15275 PF03309 Type III pantothenate kinase JCR17_15280 PF02881 SRP54-type protein, helical bundle domain JCR17_15280 PF02978 Signal peptide binding domain JCR17_15280 PF00448 SRP54-type protein, GTPase domain JCR17_15290 PF01207 Dihydrouridine synthase (Dus) JCR17_15320 PF00692 dUTPase JCR17_15335 PF01048 Phosphorylase superfamily JCR17_15340 PF10609 NUBPL iron-transfer P-loop NTPase JCR17_15350 PF09334 tRNA synthetases class I (M) JCR17_15350 PF01588 Putative tRNA binding domain JCR17_15375 PF13533 Biotin-lipoyl like JCR17_15380 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_15395 PF05552 Conserved TM helix JCR17_15410 PF00970 Oxidoreductase FAD-binding domain JCR17_15410 PF00175 Oxidoreductase NAD-binding domain JCR17_15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_15415 PF03466 LysR substrate binding domain JCR17_15420 PF00313 'Cold-shock' DNA-binding domain JCR17_15430 PF00361 Proton-conducting membrane transporter JCR17_15435 PF00361 Proton-conducting membrane transporter JCR17_15440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR17_15440 PF00361 Proton-conducting membrane transporter JCR17_15445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR17_15450 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JCR17_15455 PF12838 4Fe-4S dicluster domain JCR17_15460 PF00146 NADH dehydrogenase JCR17_15465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR17_15465 PF00384 Molybdopterin oxidoreductase JCR17_15465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JCR17_15470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JCR17_15470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JCR17_15470 PF10531 SLBB domain JCR17_15480 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JCR17_15480 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JCR17_15485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JCR17_15490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JCR17_15495 PF00990 Diguanylate cyclase, GGDEF domain JCR17_15495 PF17151 Periplasmic sensor domain JCR17_15505 PF00512 His Kinase A (phospho-acceptor) domain JCR17_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_15505 PF00672 HAMP domain JCR17_15510 PF00486 Transcriptional regulatory protein, C terminal JCR17_15510 PF00072 Response regulator receiver domain JCR17_15520 PF00317 Ribonucleotide reductase, all-alpha domain JCR17_15520 PF02867 Ribonucleotide reductase, barrel domain JCR17_15520 PF03477 ATP cone domain JCR17_15530 PF00268 Ribonucleotide reductase, small chain JCR17_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_15540 PF00512 His Kinase A (phospho-acceptor) domain JCR17_15540 PF13755 Sensor N-terminal transmembrane domain JCR17_15540 PF13756 Stimulus-sensing domain JCR17_15540 PF00672 HAMP domain JCR17_15580 PF13737 Transposase DDE domain JCR17_15620 PF13360 PQQ-like domain JCR17_15620 PF01011 PQQ enzyme repeat JCR17_15635 PF13737 Transposase DDE domain JCR17_15650 PF02567 Phenazine biosynthesis-like protein JCR17_15685 PF10544 T5orf172 domain JCR17_15690 PF13614 AAA domain JCR17_15710 PF00905 Penicillin binding protein transpeptidase domain JCR17_15720 PF01613 Flavin reductase like domain JCR17_15725 PF01717 Cobalamin-independent synthase, Catalytic domain JCR17_15725 PF08267 Cobalamin-independent synthase, N-terminal domain JCR17_15735 PF03466 LysR substrate binding domain JCR17_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_15740 PF01810 LysE type translocator JCR17_15750 PF12833 Helix-turn-helix domain JCR17_15750 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR17_15755 PF07687 Peptidase dimerisation domain JCR17_15755 PF01546 Peptidase family M20/M25/M40 JCR17_15765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_15765 PF03466 LysR substrate binding domain JCR17_15770 PF07690 Major Facilitator Superfamily JCR17_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_15780 PF03466 LysR substrate binding domain JCR17_15785 PF00890 FAD binding domain JCR17_15785 PF14537 Cytochrome c3 JCR17_15795 PF02515 CoA-transferase family III JCR17_15800 PF07690 Major Facilitator Superfamily JCR17_15805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_15805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_15805 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_15810 PF03466 LysR substrate binding domain JCR17_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_15815 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_15815 PF00107 Zinc-binding dehydrogenase JCR17_15820 PF00962 Adenosine/AMP deaminase JCR17_15845 PF02445 Quinolinate synthetase A protein JCR17_15850 PF01960 ArgJ family JCR17_15855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR17_15855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR17_15860 PF00893 Small Multidrug Resistance protein JCR17_15870 PF05275 Copper resistance protein B precursor (CopB) JCR17_15875 PF00394 Multicopper oxidase JCR17_15875 PF07732 Multicopper oxidase JCR17_15875 PF07731 Multicopper oxidase JCR17_15890 PF00834 Ribulose-phosphate 3 epimerase family JCR17_15900 PF00756 Putative esterase JCR17_15910 PF04445 Putative SAM-dependent methyltransferase JCR17_15915 PF00814 Glycoprotease family JCR17_15920 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_15925 PF00293 NUDIX domain JCR17_15965 PF00425 chorismate binding enzyme JCR17_15965 PF04715 Anthranilate synthase component I, N terminal region JCR17_15970 PF00155 Aminotransferase class I and II JCR17_15975 PF00815 Histidinol dehydrogenase JCR17_15980 PF01634 ATP phosphoribosyltransferase JCR17_15985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR17_15990 PF01722 BolA-like protein JCR17_15995 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCR17_16000 PF04963 Sigma-54 factor, core binding domain JCR17_16000 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCR17_16000 PF04552 Sigma-54, DNA binding domain JCR17_16045 PF00795 Carbon-nitrogen hydrolase JCR17_16055 PF01047 MarR family JCR17_16060 PF02566 OsmC-like protein JCR17_16065 PF00437 Type II/IV secretion system protein JCR17_16085 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCR17_16085 PF00476 DNA polymerase family A JCR17_16085 PF01612 3'-5' exonuclease JCR17_16085 PF01367 5'-3' exonuclease, C-terminal SAM fold JCR17_16090 PF02325 YGGT family JCR17_16095 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR17_16095 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR17_16100 PF11734 TilS substrate C-terminal domain JCR17_16100 PF01171 PP-loop family JCR17_16100 PF09179 TilS substrate binding domain JCR17_16105 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCR17_16110 PF02541 Ppx/GppA phosphatase family JCR17_16115 PF00085 Thioredoxin JCR17_16120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR17_16120 PF07497 Rho termination factor, RNA-binding domain JCR17_16120 PF07498 Rho termination factor, N-terminal domain JCR17_16135 PF00216 Bacterial DNA-binding protein JCR17_16140 PF03483 B3/4 domain JCR17_16140 PF03484 tRNA synthetase B5 domain JCR17_16140 PF03147 Ferredoxin-fold anticodon binding domain JCR17_16140 PF01588 Putative tRNA binding domain JCR17_16140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCR17_16145 PF01409 tRNA synthetases class II core domain (F) JCR17_16145 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCR17_16165 PF00453 Ribosomal protein L20 JCR17_16170 PF01632 Ribosomal protein L35 JCR17_16175 PF07690 Major Facilitator Superfamily JCR17_16180 PF09335 SNARE associated Golgi protein JCR17_16185 PF02798 Glutathione S-transferase, N-terminal domain JCR17_16185 PF00043 Glutathione S-transferase, C-terminal domain JCR17_16190 PF05198 Translation initiation factor IF-3, N-terminal domain JCR17_16190 PF00707 Translation initiation factor IF-3, C-terminal domain JCR17_16195 PF03129 Anticodon binding domain JCR17_16195 PF02824 TGS domain JCR17_16195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR17_16195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR17_16200 PF00501 AMP-binding enzyme JCR17_16200 PF13193 AMP-binding enzyme C-terminal domain JCR17_16205 PF04751 Protein of unknown function (DUF615) JCR17_16210 PF00381 PTS HPr component phosphorylation site JCR17_16215 PF03668 P-loop ATPase protein family JCR17_16220 PF02569 Pantoate-beta-alanine ligase JCR17_16225 PF02548 Ketopantoate hydroxymethyltransferase JCR17_16230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCR17_16235 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR17_16235 PF01743 Poly A polymerase head domain JCR17_16235 PF12626 Polymerase A arginine-rich C-terminus JCR17_16245 PF03819 MazG nucleotide pyrophosphohydrolase domain JCR17_16255 PF13291 ACT domain JCR17_16255 PF04607 Region found in RelA / SpoT proteins JCR17_16255 PF02824 TGS domain JCR17_16260 PF05958 tRNA (Uracil-5-)-methyltransferase JCR17_16270 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_16275 PF00672 HAMP domain JCR17_16275 PF00512 His Kinase A (phospho-acceptor) domain JCR17_16275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JCR17_16275 PF00072 Response regulator receiver domain JCR17_16275 PF01627 Hpt domain JCR17_16280 PF00378 Enoyl-CoA hydratase/isomerase JCR17_16285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR17_16285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR17_16290 PF01261 Xylose isomerase-like TIM barrel JCR17_16300 PF00106 short chain dehydrogenase JCR17_16305 PF02233 NAD(P) transhydrogenase beta subunit JCR17_16310 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JCR17_16315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCR17_16315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCR17_16320 PF00892 EamA-like transporter family JCR17_16330 PF07690 Major Facilitator Superfamily JCR17_16335 PF01207 Dihydrouridine synthase (Dus) JCR17_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_16345 PF03466 LysR substrate binding domain JCR17_16355 PF00899 ThiF family JCR17_16365 PF00330 Aconitase family (aconitate hydratase) JCR17_16365 PF00694 Aconitase C-terminal domain JCR17_16370 PF01026 TatD related DNase JCR17_16385 PF00009 Elongation factor Tu GTP binding domain JCR17_16385 PF16658 Class II release factor RF3, C-terminal domain JCR17_16385 PF03144 Elongation factor Tu domain 2 JCR17_16405 PF00990 Diguanylate cyclase, GGDEF domain JCR17_16405 PF00563 EAL domain JCR17_16405 PF03707 Bacterial signalling protein N terminal repeat JCR17_16410 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JCR17_16410 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JCR17_16415 PF10369 Small subunit of acetolactate synthase JCR17_16420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR17_16420 PF00205 Thiamine pyrophosphate enzyme, central domain JCR17_16420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR17_16430 PF08264 Anticodon-binding domain of tRNA JCR17_16430 PF13603 Leucyl-tRNA synthetase, Domain 2 JCR17_16430 PF09334 tRNA synthetases class I (M) JCR17_16430 PF00133 tRNA synthetases class I (I, L, M and V) JCR17_16445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR17_16450 PF12704 MacB-like periplasmic core domain JCR17_16450 PF02687 FtsX-like permease family JCR17_16450 PF00005 ABC transporter JCR17_16455 PF02321 Outer membrane efflux protein JCR17_16470 PF00929 Exonuclease JCR17_16475 PF03193 RsgA GTPase JCR17_16485 PF00462 Glutaredoxin JCR17_16490 PF02556 Preprotein translocase subunit SecB JCR17_16505 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_16505 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_16520 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_16520 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_16530 PF04820 Tryptophan halogenase JCR17_16550 PF00221 Aromatic amino acid lyase JCR17_16565 PF00501 AMP-binding enzyme JCR17_16565 PF13193 AMP-binding enzyme C-terminal domain JCR17_16575 PF00550 Phosphopantetheine attachment site JCR17_16580 PF00550 Phosphopantetheine attachment site JCR17_16600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCR17_16600 PF01926 50S ribosome-binding GTPase JCR17_16605 PF13360 PQQ-like domain JCR17_16615 PF03129 Anticodon binding domain JCR17_16615 PF13393 Histidyl-tRNA synthetase JCR17_16620 PF04551 GcpE protein JCR17_16625 PF13464 Domain of unknown function (DUF4115) JCR17_16635 PF04055 Radical SAM superfamily JCR17_16640 PF00334 Nucleoside diphosphate kinase JCR17_16645 PF04384 Iron-sulphur cluster assembly JCR17_16650 PF01569 PAP2 superfamily JCR17_16655 PF13439 Glycosyltransferase Family 4 JCR17_16655 PF00534 Glycosyl transferases group 1 JCR17_16660 PF11818 C-terminal domain of tail specific protease (DUF3340) JCR17_16660 PF00595 PDZ domain JCR17_16660 PF03572 Peptidase family S41 JCR17_16660 PF17804 Tail specific protease N-terminal domain JCR17_16665 PF00933 Glycosyl hydrolase family 3 N terminal domain JCR17_16675 PF00561 alpha/beta hydrolase fold JCR17_16680 PF00171 Aldehyde dehydrogenase family JCR17_16685 PF00171 Aldehyde dehydrogenase family JCR17_16690 PF01202 Shikimate kinase JCR17_16695 PF02447 GntP family permease JCR17_16700 PF01081 KDPG and KHG aldolase JCR17_16705 PF00920 Dehydratase family JCR17_16715 PF00871 Acetokinase family JCR17_16720 PF01515 Phosphate acetyl/butaryl transferase JCR17_16720 PF07085 DRTGG domain JCR17_16725 PF05681 Fumarate hydratase (Fumerase) JCR17_16725 PF05683 Fumarase C-terminus JCR17_16740 PF10431 C-terminal, D2-small domain, of ClpB protein JCR17_16740 PF06689 ClpX C4-type zinc finger JCR17_16740 PF07724 AAA domain (Cdc48 subfamily) JCR17_16745 PF00574 Clp protease JCR17_16750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR17_16750 PF05698 Bacterial trigger factor protein (TF) C-terminus JCR17_16750 PF05697 Bacterial trigger factor protein (TF) JCR17_16755 PF00593 TonB dependent receptor JCR17_16755 PF07715 TonB-dependent Receptor Plug Domain JCR17_16760 PF13640 2OG-Fe(II) oxygenase superfamily JCR17_16760 PF18331 PKHD-type hydroxylase C-terminal domain JCR17_16765 PF08502 LeuA allosteric (dimerisation) domain JCR17_16765 PF00682 HMGL-like JCR17_16770 PF00561 alpha/beta hydrolase fold JCR17_16775 PF00561 alpha/beta hydrolase fold JCR17_16775 PF07021 Methionine biosynthesis protein MetW JCR17_16785 PF01725 Ham1 family JCR17_16795 PF02416 mttA/Hcf106 family JCR17_16800 PF02416 mttA/Hcf106 family JCR17_16805 PF00902 Sec-independent protein translocase protein (TatC) JCR17_16825 PF01790 Prolipoprotein diacylglyceryl transferase JCR17_16840 PF00303 Thymidylate synthase JCR17_16845 PF00186 Dihydrofolate reductase JCR17_16855 PF01625 Peptide methionine sulfoxide reductase JCR17_16865 PF01618 MotA/TolQ/ExbB proton channel family JCR17_16875 PF01842 ACT domain JCR17_16875 PF00551 Formyl transferase JCR17_16885 PF00171 Aldehyde dehydrogenase family JCR17_16890 PF00830 Ribosomal L28 family JCR17_16895 PF00471 Ribosomal protein L33 JCR17_16900 PF00999 Sodium/hydrogen exchanger family JCR17_16900 PF02254 TrkA-N domain JCR17_16920 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JCR17_16925 PF00580 UvrD/REP helicase N-terminal domain JCR17_16925 PF13361 UvrD-like helicase C-terminal domain JCR17_16940 PF01131 DNA topoisomerase JCR17_16940 PF01751 Toprim domain JCR17_16940 PF01396 Topoisomerase DNA binding C4 zinc finger JCR17_16940 PF08272 Topoisomerase I zinc-ribbon-like JCR17_16950 PF01638 HxlR-like helix-turn-helix JCR17_16955 PF08240 Alcohol dehydrogenase GroES-like domain JCR17_16955 PF00107 Zinc-binding dehydrogenase JCR17_16960 PF04102 SlyX JCR17_16965 PF12848 ABC transporter JCR17_16965 PF00005 ABC transporter JCR17_16965 PF16326 ABC transporter C-terminal domain JCR17_16970 PF01810 LysE type translocator JCR17_16975 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR17_16985 PF00375 Sodium:dicarboxylate symporter family JCR17_16995 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR17_16995 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR17_17015 PF01416 tRNA pseudouridine synthase JCR17_17025 PF01176 Translation initiation factor 1A / IF-1 JCR17_17040 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR17_17050 PF00694 Aconitase C-terminal domain JCR17_17055 PF00330 Aconitase family (aconitate hydratase) JCR17_17065 PF03466 LysR substrate binding domain JCR17_17065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_17085 PF00905 Penicillin binding protein transpeptidase domain JCR17_17105 PF13614 AAA domain JCR17_17110 PF10544 T5orf172 domain JCR17_17135 PF00293 NUDIX domain JCR17_17140 PF00391 PEP-utilising enzyme, mobile domain JCR17_17140 PF05524 PEP-utilising enzyme, N-terminal JCR17_17140 PF02896 PEP-utilising enzyme, TIM barrel domain JCR17_17140 PF01590 GAF domain JCR17_17145 PF00141 Peroxidase JCR17_17150 PF12706 Beta-lactamase superfamily domain JCR17_17155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_17155 PF03466 LysR substrate binding domain JCR17_17165 PF02798 Glutathione S-transferase, N-terminal domain JCR17_17170 PF13280 WYL domain JCR17_17170 PF08279 HTH domain JCR17_17175 PF13419 Haloacid dehalogenase-like hydrolase JCR17_17180 PF00849 RNA pseudouridylate synthase JCR17_17180 PF01479 S4 domain JCR17_17185 PF12111 Polyribonucleotide phosphorylase C terminal JCR17_17185 PF10150 Ribonuclease E/G family JCR17_17185 PF00575 S1 RNA binding domain JCR17_17190 PF00501 AMP-binding enzyme JCR17_17190 PF13193 AMP-binding enzyme C-terminal domain JCR17_17205 PF03466 LysR substrate binding domain JCR17_17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR17_17210 PF00106 short chain dehydrogenase JCR17_17215 PF06969 HemN C-terminal domain JCR17_17215 PF04055 Radical SAM superfamily JCR17_17225 PF01554 MatE JCR17_17230 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_17230 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR17_17230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_17235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR17_17235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_17240 PF03109 ABC1 family JCR17_17245 PF01197 Ribosomal protein L31 JCR17_17260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JCR17_17280 PF03884 DNA gyrase inhibitor YacG JCR17_17285 PF00753 Metallo-beta-lactamase superfamily JCR17_17290 PF00762 Ferrochelatase JCR17_17300 PF01177 Asp/Glu/Hydantoin racemase JCR17_17315 PF01206 Sulfurtransferase TusA JCR17_17320 PF03471 Transporter associated domain JCR17_17320 PF00571 CBS domain JCR17_17325 PF00795 Carbon-nitrogen hydrolase JCR17_17330 PF01588 Putative tRNA binding domain JCR17_17340 PF08334 Type II secretion system (T2SS), protein G JCR17_17340 PF07963 Prokaryotic N-terminal methylation motif JCR17_17345 PF00482 Type II secretion system (T2SS), protein F JCR17_17350 PF00270 DEAD/DEAH box helicase JCR17_17350 PF00271 Helicase conserved C-terminal domain JCR17_17350 PF18074 Primosomal protein N C-terminal domain JCR17_17350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCR17_17350 PF17764 3′ DNA-binding domain (3′BD) JCR17_17355 PF00999 Sodium/hydrogen exchanger family JCR17_17355 PF02254 TrkA-N domain JCR17_17360 PF01430 Hsp33 protein JCR17_17370 PF00226 DnaJ domain JCR17_17370 PF01556 DnaJ C terminal domain JCR17_17380 PF01544 CorA-like Mg2+ transporter protein JCR17_17385 PF01138 3' exoribonuclease family, domain 1 JCR17_17385 PF00013 KH domain JCR17_17385 PF00575 S1 RNA binding domain JCR17_17385 PF03725 3' exoribonuclease family, domain 2 JCR17_17385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCR17_17390 PF00312 Ribosomal protein S15 JCR17_17395 PF00144 Beta-lactamase JCR17_17400 PF13538 UvrD-like helicase C-terminal domain JCR17_17405 PF12705 PD-(D/E)XK nuclease superfamily JCR17_17405 PF00580 UvrD/REP helicase N-terminal domain JCR17_17405 PF13361 UvrD-like helicase C-terminal domain JCR17_17410 PF17946 RecC C-terminal domain JCR17_17420 PF03976 Polyphosphate kinase 2 (PPK2) JCR17_17430 PF01209 ubiE/COQ5 methyltransferase family JCR17_17440 PF03109 ABC1 family JCR17_17445 PF01494 FAD binding domain JCR17_17450 PF01502 Phosphoribosyl-AMP cyclohydrolase JCR17_17465 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JCR17_17465 PF00361 Proton-conducting membrane transporter JCR17_17465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR17_17465 PF13244 Domain of unknown function (DUF4040) JCR17_17470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR17_17475 PF00361 Proton-conducting membrane transporter JCR17_17480 PF01899 Na+/H+ ion antiporter subunit JCR17_17485 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JCR17_17490 PF03334 Na+/H+ antiporter subunit JCR17_17495 PF02033 Ribosome-binding factor A JCR17_17500 PF00009 Elongation factor Tu GTP binding domain JCR17_17500 PF11987 Translation-initiation factor 2 JCR17_17500 PF08364 Bacterial translation initiation factor IF-2 associated region JCR17_17500 PF04760 Translation initiation factor IF-2, N-terminal region JCR17_17505 PF13184 NusA-like KH domain JCR17_17505 PF08529 NusA N-terminal domain JCR17_17505 PF00575 S1 RNA binding domain JCR17_17510 PF02576 RimP N-terminal domain JCR17_17510 PF17384 RimP C-terminal SH3 domain JCR17_17530 PF03840 Preprotein translocase SecG subunit JCR17_17535 PF00121 Triosephosphate isomerase JCR17_17540 PF00437 Type II/IV secretion system protein JCR17_17540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR17_17545 PF00482 Type II secretion system (T2SS), protein F JCR17_17550 PF06750 Bacterial Peptidase A24 N-terminal domain JCR17_17550 PF01478 Type IV leader peptidase family JCR17_17555 PF01121 Dephospho-CoA kinase JCR17_17565 PF00588 SpoU rRNA Methylase family JCR17_17565 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR17_17570 PF06865 Pyrimidine/purine nucleoside phosphorylase JCR17_17580 PF02463 RecF/RecN/SMC N terminal domain JCR17_17585 PF02622 Uncharacterized ACR, COG1678 JCR17_17590 PF03652 Holliday junction resolvase JCR17_17595 PF13533 Biotin-lipoyl like JCR17_17620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR17_17620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR17_17620 PF12833 Helix-turn-helix domain JCR17_17620 PF02805 Metal binding domain of Ada JCR17_17625 PF01066 CDP-alcohol phosphatidyltransferase JCR17_17635 PF08459 UvrC Helix-hairpin-helix N-terminal JCR17_17635 PF01541 GIY-YIG catalytic domain JCR17_17635 PF02151 UvrB/uvrC motif JCR17_17655 PF00378 Enoyl-CoA hydratase/isomerase JCR17_17655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR17_17655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR17_17660 PF00108 Thiolase, N-terminal domain JCR17_17660 PF02803 Thiolase, C-terminal domain JCR17_17680 PF00376 MerR family regulatory protein JCR17_17680 PF09278 MerR, DNA binding JCR17_17690 PF01323 DSBA-like thioredoxin domain JCR17_17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_17705 PF00183 Hsp90 protein JCR17_17720 PF03553 Na+/H+ antiporter family JCR17_17720 PF13726 Na+-H+ antiporter family JCR17_17725 PF00561 alpha/beta hydrolase fold JCR17_17745 PF04997 RNA polymerase Rpb1, domain 1 JCR17_17745 PF04998 RNA polymerase Rpb1, domain 5 JCR17_17745 PF00623 RNA polymerase Rpb1, domain 2 JCR17_17745 PF04983 RNA polymerase Rpb1, domain 3 JCR17_17745 PF05000 RNA polymerase Rpb1, domain 4 JCR17_17750 PF04560 RNA polymerase Rpb2, domain 7 JCR17_17750 PF10385 RNA polymerase beta subunit external 1 domain JCR17_17750 PF00562 RNA polymerase Rpb2, domain 6 JCR17_17750 PF04563 RNA polymerase beta subunit JCR17_17750 PF04565 RNA polymerase Rpb2, domain 3 JCR17_17750 PF04561 RNA polymerase Rpb2, domain 2 JCR17_17755 PF16320 Ribosomal protein L7/L12 dimerisation domain JCR17_17755 PF00542 Ribosomal protein L7/L12 C-terminal domain JCR17_17760 PF00466 Ribosomal protein L10 JCR17_17765 PF00687 Ribosomal protein L1p/L10e family JCR17_17770 PF00298 Ribosomal protein L11, RNA binding domain JCR17_17770 PF03946 Ribosomal protein L11, N-terminal domain JCR17_17775 PF02357 Transcription termination factor nusG JCR17_17775 PF00467 KOW motif JCR17_17780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCR17_17790 PF00009 Elongation factor Tu GTP binding domain JCR17_17790 PF03143 Elongation factor Tu C-terminal domain JCR17_17790 PF03144 Elongation factor Tu domain 2 JCR17_17815 PF00425 chorismate binding enzyme JCR17_17815 PF04715 Anthranilate synthase component I, N terminal region JCR17_17820 PF13419 Haloacid dehalogenase-like hydrolase JCR17_17825 PF12401 Protein of unknown function (DUF2662) JCR17_17825 PF00498 FHA domain JCR17_17830 PF00263 Bacterial type II and III secretion system protein JCR17_17830 PF03958 Bacterial type II/III secretion system short domain JCR17_17845 PF00816 H-NS histone family JCR17_17870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JCR17_17870 PF03900 Porphobilinogen deaminase, C-terminal domain JCR17_17875 PF00072 Response regulator receiver domain JCR17_17875 PF04397 LytTr DNA-binding domain JCR17_17880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_17880 PF07694 5TMR of 5TMR-LYT JCR17_17880 PF06580 Histidine kinase JCR17_17885 PF00206 Lyase JCR17_17885 PF14698 Argininosuccinate lyase C-terminal JCR17_17890 PF04362 Bacterial Fe(2+) trafficking JCR17_17895 PF01895 PhoU domain JCR17_17900 PF02321 Outer membrane efflux protein JCR17_17905 PF00892 EamA-like transporter family JCR17_17920 PF13667 ThiC-associated domain JCR17_17920 PF01964 Radical SAM ThiC family JCR17_17925 PF00293 NUDIX domain JCR17_17930 PF00149 Calcineurin-like phosphoesterase JCR17_17935 PF01258 Prokaryotic dksA/traR C4-type zinc finger JCR17_17940 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR17_17945 PF01098 Cell cycle protein JCR17_17950 PF08245 Mur ligase middle domain JCR17_17950 PF02875 Mur ligase family, glutamate ligase domain JCR17_17960 PF07670 Nucleoside recognition JCR17_17960 PF02421 Ferrous iron transport protein B JCR17_17960 PF07664 Ferrous iron transport protein B C terminus JCR17_17970 PF02899 Phage integrase, N-terminal SAM-like domain JCR17_17970 PF00589 Phage integrase family JCR17_17975 PF10411 Disulfide bond isomerase protein N-terminus JCR17_17975 PF13098 Thioredoxin-like domain JCR17_17980 PF03447 Homoserine dehydrogenase, NAD binding domain JCR17_17980 PF00742 Homoserine dehydrogenase JCR17_17980 PF01842 ACT domain JCR17_17985 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_17990 PF00768 D-alanyl-D-alanine carboxypeptidase JCR17_17995 PF00196 Bacterial regulatory proteins, luxR family JCR17_17995 PF00072 Response regulator receiver domain JCR17_18000 PF00512 His Kinase A (phospho-acceptor) domain JCR17_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR17_18005 PF02954 Bacterial regulatory protein, Fis family JCR17_18005 PF00072 Response regulator receiver domain JCR17_18005 PF00158 Sigma-54 interaction domain JCR17_18010 PF00595 PDZ domain JCR17_18010 PF03572 Peptidase family S41 JCR17_18015 PF01676 Metalloenzyme superfamily JCR17_18015 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JCR17_18020 PF03739 Lipopolysaccharide export system permease LptF/LptG JCR17_18030 PF00883 Cytosol aminopeptidase family, catalytic domain JCR17_18030 PF02789 Cytosol aminopeptidase family, N-terminal domain JCR17_18050 PF00677 Lumazine binding domain JCR17_18060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCR17_18060 PF01872 RibD C-terminal domain JCR17_18065 PF03477 ATP cone domain JCR17_18070 PF00909 Ammonium Transporter Family JCR17_18075 PF00543 Nitrogen regulatory protein P-II JCR17_18085 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR17_18085 PF01078 Magnesium chelatase, subunit ChlI JCR17_18095 PF01740 STAS domain JCR17_18095 PF00916 Sulfate permease family JCR17_18100 PF00582 Universal stress protein family JCR17_18120 PF00665 Integrase core domain JCR17_18130 PF01078 Magnesium chelatase, subunit ChlI JCR17_18130 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR17_18135 PF00155 Aminotransferase class I and II JCR17_18135 PF00392 Bacterial regulatory proteins, gntR family JCR17_18145 PF00701 Dihydrodipicolinate synthetase family JCR17_18155 PF03573 outer membrane porin, OprD family JCR17_18160 PF00719 Inorganic pyrophosphatase JCR17_18175 PF00501 AMP-binding enzyme JCR17_18175 PF13193 AMP-binding enzyme C-terminal domain JCR17_18180 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR17_18180 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR17_18185 PF07690 Major Facilitator Superfamily JCR17_18190 PF03458 UPF0126 domain JCR17_18195 PF02810 SEC-C motif JCR17_18200 PF03741 Integral membrane protein TerC family JCR17_18200 PF03471 Transporter associated domain JCR17_18205 PF03641 Possible lysine decarboxylase JCR17_18210 PF07690 Major Facilitator Superfamily JCR17_18220 PF11798 IMS family HHH motif JCR17_18220 PF00817 impB/mucB/samB family JCR17_18220 PF11799 impB/mucB/samB family C-terminal domain JCR17_18235 PF04055 Radical SAM superfamily JCR17_18235 PF11842 Domain of unknown function (DUF3362) JCR17_18235 PF08497 Radical SAM N-terminal JCR17_18255 PF03358 NADPH-dependent FMN reductase JCR17_18265 PF00291 Pyridoxal-phosphate dependent enzyme JCR17_18300 PF00440 Bacterial regulatory proteins, tetR family JCR17_18325 PF01327 Polypeptide deformylase JCR17_18335 PF17782 DprA winged helix domain JCR17_18335 PF02481 DNA recombination-mediator protein A JCR17_18340 PF01300 Telomere recombination JCR17_18345 PF00892 EamA-like transporter family JCR17_18350 PF00440 Bacterial regulatory proteins, tetR family JCR17_18355 PF07690 Major Facilitator Superfamily JCR17_18365 PF00255 Glutathione peroxidase JCR17_18375 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCR17_18380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR17_18380 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR17_18385 PF00231 ATP synthase JCR17_18390 PF00306 ATP synthase alpha/beta chain, C terminal domain JCR17_18390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR17_18390 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR17_18395 PF00213 ATP synthase delta (OSCP) subunit JCR17_18400 PF00430 ATP synthase B/B' CF(0) JCR17_18405 PF00137 ATP synthase subunit C JCR17_18410 PF00119 ATP synthase A chain JCR17_18430 PF00005 ABC transporter JCR17_18435 PF00950 ABC 3 transport family JCR17_18440 PF01810 LysE type translocator JCR17_18445 PF04261 Dyp-type peroxidase family JCR17_18450 PF03949 Malic enzyme, NAD binding domain JCR17_18450 PF00390 Malic enzyme, N-terminal domain JCR17_18455 PF00750 tRNA synthetases class I (R) JCR17_18455 PF03485 Arginyl tRNA synthetase N terminal domain JCR17_18455 PF05746 DALR anticodon binding domain JCR17_18475 PF02678 Pirin JCR17_18475 PF05726 Pirin C-terminal cupin domain JCR17_18485 PF03551 Transcriptional regulator PadR-like family JCR17_18490 PF13427 Domain of unknown function (DUF4111) JCR17_18490 PF01909 Nucleotidyltransferase domain JCR17_18495 PF00958 GMP synthase C terminal domain JCR17_18495 PF00117 Glutamine amidotransferase class-I JCR17_18495 PF02540 NAD synthase JCR17_18500 PF04286 Protein of unknown function (DUF445) JCR17_18505 PF07681 DoxX JCR17_18510 PF09335 SNARE associated Golgi protein JCR17_18525 PF13614 AAA domain JCR17_18535 PF01722 BolA-like protein JCR17_18550 PF01648 4'-phosphopantetheinyl transferase superfamily JCR17_18555 PF16363 GDP-mannose 4,6 dehydratase JCR17_18570 PF13193 AMP-binding enzyme C-terminal domain JCR17_18570 PF00550 Phosphopantetheine attachment site JCR17_18570 PF00668 Condensation domain JCR17_18570 PF00501 AMP-binding enzyme JCR17_18570 PF00975 Thioesterase domain JCR17_18575 PF08242 Methyltransferase domain JCR17_18575 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_18575 PF00550 Phosphopantetheine attachment site JCR17_18575 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_18575 PF16197 Ketoacyl-synthetase C-terminal extension JCR17_18575 PF14765 Polyketide synthase dehydratase JCR17_18575 PF00975 Thioesterase domain JCR17_18580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_18580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_18580 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_18585 PF00501 AMP-binding enzyme JCR17_18590 PF13737 Transposase DDE domain JCR17_18595 PF03472 Autoinducer binding domain JCR17_18595 PF00196 Bacterial regulatory proteins, luxR family JCR17_18605 PF00765 Autoinducer synthase JCR17_18610 PF07690 Major Facilitator Superfamily JCR17_18610 PF00083 Sugar (and other) transporter JCR17_18615 PF00378 Enoyl-CoA hydratase/isomerase JCR17_18620 PF00378 Enoyl-CoA hydratase/isomerase JCR17_18625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR17_18625 PF02770 Acyl-CoA dehydrogenase, middle domain JCR17_18625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR17_18630 PF13193 AMP-binding enzyme C-terminal domain JCR17_18630 PF00501 AMP-binding enzyme JCR17_18635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR17_18635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR17_18640 PF00171 Aldehyde dehydrogenase family JCR17_18650 PF00324 Amino acid permease JCR17_18655 PF00324 Amino acid permease JCR17_18660 PF01042 Endoribonuclease L-PSP JCR17_18665 PF01168 Alanine racemase, N-terminal domain JCR17_18665 PF00842 Alanine racemase, C-terminal domain JCR17_18670 PF01266 FAD dependent oxidoreductase JCR17_18675 PF01037 Lrp/AsnC ligand binding domain JCR17_18685 PF00593 TonB dependent receptor JCR17_18685 PF07715 TonB-dependent Receptor Plug Domain JCR17_18700 PF00849 RNA pseudouridylate synthase JCR17_18725 PF04717 Type VI secretion system, phage-baseplate injector JCR17_18725 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR17_18725 PF13296 Putative type VI secretion system Rhs element Vgr JCR17_18730 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR17_18730 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR17_18765 PF00694 Aconitase C-terminal domain JCR17_18765 PF00330 Aconitase family (aconitate hydratase) JCR17_18770 PF00285 Citrate synthase, C-terminal domain JCR17_18780 PF07729 FCD domain JCR17_18780 PF00392 Bacterial regulatory proteins, gntR family JCR17_18790 PF00155 Aminotransferase class I and II JCR17_18795 PF09330 D-lactate dehydrogenase, membrane binding JCR17_18795 PF01565 FAD binding domain JCR17_18800 PF01070 FMN-dependent dehydrogenase JCR17_18805 PF07729 FCD domain JCR17_18805 PF00392 Bacterial regulatory proteins, gntR family JCR17_18810 PF02652 L-lactate permease JCR17_18815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR17_18815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR17_18815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR17_18815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR17_18820 PF16363 GDP-mannose 4,6 dehydratase JCR17_18825 PF00342 Phosphoglucose isomerase JCR17_18830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR17_18830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR17_18830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR17_18835 PF00483 Nucleotidyl transferase JCR17_18840 PF02397 Bacterial sugar transferase JCR17_18845 PF00953 Glycosyl transferase family 4 JCR17_18850 PF01370 NAD dependent epimerase/dehydratase family JCR17_18855 PF13579 Glycosyl transferase 4-like domain JCR17_18860 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR17_18865 PF01370 NAD dependent epimerase/dehydratase family JCR17_18870 PF02719 Polysaccharide biosynthesis protein JCR17_18870 PF08485 Polysaccharide biosynthesis protein C-terminal JCR17_18890 PF00132 Bacterial transferase hexapeptide (six repeats) JCR17_18900 PF01370 NAD dependent epimerase/dehydratase family JCR17_18905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR17_18905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR17_18905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR17_18910 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JCR17_18910 PF02563 Polysaccharide biosynthesis/export protein JCR17_18910 PF10531 SLBB domain JCR17_18915 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR17_18920 PF13614 AAA domain JCR17_18920 PF13807 G-rich domain on putative tyrosine kinase JCR17_18920 PF02706 Chain length determinant protein JCR17_18925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR17_18925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR17_18930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR17_18930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR17_18935 PF03023 Lipid II flippase MurJ JCR17_18940 PF01510 N-acetylmuramoyl-L-alanine amidase JCR17_18945 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JCR17_18945 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JCR17_18965 PF03725 3' exoribonuclease family, domain 2 JCR17_18965 PF01138 3' exoribonuclease family, domain 1 JCR17_18970 PF00487 Fatty acid desaturase JCR17_18975 PF00175 Oxidoreductase NAD-binding domain JCR17_18980 PF00440 Bacterial regulatory proteins, tetR family JCR17_18985 PF00440 Bacterial regulatory proteins, tetR family JCR17_18985 PF08360 QacR-like protein, C-terminal region JCR17_18990 PF01323 DSBA-like thioredoxin domain JCR17_19000 PF13419 Haloacid dehalogenase-like hydrolase JCR17_19005 PF00106 short chain dehydrogenase JCR17_19020 PF00583 Acetyltransferase (GNAT) family JCR17_19020 PF00696 Amino acid kinase family JCR17_19025 PF09084 NMT1/THI5 like JCR17_19030 PF09084 NMT1/THI5 like JCR17_19035 PF00296 Luciferase-like monooxygenase JCR17_19040 PF00528 Binding-protein-dependent transport system inner membrane component JCR17_19045 PF00005 ABC transporter JCR17_19050 PF08362 YcdC-like protein, C-terminal region JCR17_19050 PF00440 Bacterial regulatory proteins, tetR family JCR17_19055 PF01048 Phosphorylase superfamily JCR17_19065 PF06574 FAD synthetase JCR17_19065 PF01687 Riboflavin kinase JCR17_19070 PF08264 Anticodon-binding domain of tRNA JCR17_19070 PF00133 tRNA synthetases class I (I, L, M and V) JCR17_19070 PF06827 Zinc finger found in FPG and IleRS JCR17_19075 PF01252 Signal peptidase (SPase) II JCR17_19080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR17_19120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR17_19125 PF07859 alpha/beta hydrolase fold JCR17_19150 PF01025 GrpE JCR17_19155 PF00012 Hsp70 protein JCR17_19175 PF13406 Transglycosylase SLT domain JCR17_19180 PF02222 ATP-grasp domain JCR17_19180 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCR17_19185 PF00731 AIR carboxylase JCR17_19195 PF02875 Mur ligase family, glutamate ligase domain JCR17_19195 PF01225 Mur ligase family, catalytic domain JCR17_19195 PF08245 Mur ligase middle domain JCR17_19205 PF01569 PAP2 superfamily JCR17_19210 PF03741 Integral membrane protein TerC family JCR17_19220 PF03738 Glutathionylspermidine synthase preATP-grasp JCR17_19225 PF00355 Rieske [2Fe-2S] domain JCR17_19230 PF01979 Amidohydrolase family JCR17_19235 PF00156 Phosphoribosyl transferase domain JCR17_19245 PF13098 Thioredoxin-like domain JCR17_19245 PF10411 Disulfide bond isomerase protein N-terminus JCR17_19250 PF01545 Cation efflux family JCR17_19250 PF16916 Dimerisation domain of Zinc Transporter JCR17_19255 PF02583 Metal-sensitive transcriptional repressor JCR17_19260 PF01926 50S ribosome-binding GTPase JCR17_19260 PF12631 MnmE helical domain JCR17_19260 PF10396 GTP-binding protein TrmE N-terminus JCR17_19265 PF14849 YidC periplasmic domain JCR17_19265 PF02096 60Kd inner membrane protein JCR17_19270 PF01809 Putative membrane protein insertion efficiency factor JCR17_19275 PF00825 Ribonuclease P JCR17_19295 PF13098 Thioredoxin-like domain JCR17_19295 PF10411 Disulfide bond isomerase protein N-terminus JCR17_19330 PF01464 Transglycosylase SLT domain JCR17_19345 PF02796 Helix-turn-helix domain of resolvase JCR17_19345 PF00239 Resolvase, N terminal domain JCR17_19385 PF18272 single-stranded DNA binding TraI N-terminal subdomain JCR17_19385 PF07057 DNA helicase TraI JCR17_19385 PF18340 DNA relaxase TraI 2B/2B-like domain JCR17_19385 PF08751 TrwC relaxase JCR17_19420 PF00226 DnaJ domain JCR17_19420 PF01556 DnaJ C terminal domain JCR17_19420 PF00684 DnaJ central domain JCR17_19515 PF05816 Toxic anion resistance protein (TelA) JCR17_19535 PF02195 ParB-like nuclease domain JCR17_19535 PF17762 HTH domain found in ParB protein JCR17_19540 PF13614 AAA domain JCR17_19600 PF00816 H-NS histone family JCR17_19605 PF00565 Staphylococcal nuclease homologue JCR17_19695 PF00817 impB/mucB/samB family JCR17_19695 PF13438 Domain of unknown function (DUF4113) JCR17_19695 PF11799 impB/mucB/samB family C-terminal domain JCR17_19715 PF06122 Conjugative relaxosome accessory transposon protein JCR17_19730 PF06986 Type-1V conjugative transfer system mating pair stabilisation JCR17_19740 PF06834 TraU protein