locus-tag class description JCR18_00005 PF00468 Ribosomal protein L34 JCR18_00010 PF00825 Ribonuclease P JCR18_00015 PF01809 Putative membrane protein insertion efficiency factor JCR18_00020 PF14849 YidC periplasmic domain JCR18_00020 PF02096 60Kd inner membrane protein JCR18_00025 PF01926 50S ribosome-binding GTPase JCR18_00025 PF12631 MnmE helical domain JCR18_00025 PF10396 GTP-binding protein TrmE N-terminus JCR18_00030 PF02583 Metal-sensitive transcriptional repressor JCR18_00035 PF16916 Dimerisation domain of Zinc Transporter JCR18_00035 PF01545 Cation efflux family JCR18_00040 PF13098 Thioredoxin-like domain JCR18_00040 PF10411 Disulfide bond isomerase protein N-terminus JCR18_00050 PF00156 Phosphoribosyl transferase domain JCR18_00055 PF01979 Amidohydrolase family JCR18_00060 PF00355 Rieske [2Fe-2S] domain JCR18_00065 PF03738 Glutathionylspermidine synthase preATP-grasp JCR18_00075 PF03741 Integral membrane protein TerC family JCR18_00080 PF01569 PAP2 superfamily JCR18_00090 PF01225 Mur ligase family, catalytic domain JCR18_00090 PF08245 Mur ligase middle domain JCR18_00090 PF02875 Mur ligase family, glutamate ligase domain JCR18_00100 PF00731 AIR carboxylase JCR18_00105 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCR18_00105 PF02222 ATP-grasp domain JCR18_00110 PF13406 Transglycosylase SLT domain JCR18_00130 PF00012 Hsp70 protein JCR18_00135 PF01025 GrpE JCR18_00160 PF07859 alpha/beta hydrolase fold JCR18_00165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR18_00205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR18_00210 PF01252 Signal peptidase (SPase) II JCR18_00215 PF06827 Zinc finger found in FPG and IleRS JCR18_00215 PF00133 tRNA synthetases class I (I, L, M and V) JCR18_00215 PF08264 Anticodon-binding domain of tRNA JCR18_00220 PF01687 Riboflavin kinase JCR18_00220 PF06574 FAD synthetase JCR18_00230 PF01048 Phosphorylase superfamily JCR18_00235 PF08362 YcdC-like protein, C-terminal region JCR18_00235 PF00440 Bacterial regulatory proteins, tetR family JCR18_00240 PF00005 ABC transporter JCR18_00245 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_00250 PF00296 Luciferase-like monooxygenase JCR18_00255 PF09084 NMT1/THI5 like JCR18_00260 PF09084 NMT1/THI5 like JCR18_00265 PF00696 Amino acid kinase family JCR18_00265 PF00583 Acetyltransferase (GNAT) family JCR18_00280 PF00106 short chain dehydrogenase JCR18_00285 PF13419 Haloacid dehalogenase-like hydrolase JCR18_00295 PF01323 DSBA-like thioredoxin domain JCR18_00300 PF08360 QacR-like protein, C-terminal region JCR18_00300 PF00440 Bacterial regulatory proteins, tetR family JCR18_00305 PF00440 Bacterial regulatory proteins, tetR family JCR18_00310 PF00175 Oxidoreductase NAD-binding domain JCR18_00315 PF00487 Fatty acid desaturase JCR18_00320 PF03725 3' exoribonuclease family, domain 2 JCR18_00320 PF01138 3' exoribonuclease family, domain 1 JCR18_00335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JCR18_00335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JCR18_00340 PF01510 N-acetylmuramoyl-L-alanine amidase JCR18_00345 PF03023 Lipid II flippase MurJ JCR18_00350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR18_00350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR18_00355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR18_00355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR18_00360 PF13614 AAA domain JCR18_00360 PF13807 G-rich domain on putative tyrosine kinase JCR18_00360 PF02706 Chain length determinant protein JCR18_00365 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR18_00370 PF02563 Polysaccharide biosynthesis/export protein JCR18_00370 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JCR18_00370 PF10531 SLBB domain JCR18_00375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR18_00375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR18_00375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR18_00380 PF01370 NAD dependent epimerase/dehydratase family JCR18_00390 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_00410 PF08485 Polysaccharide biosynthesis protein C-terminal JCR18_00410 PF02719 Polysaccharide biosynthesis protein JCR18_00415 PF01370 NAD dependent epimerase/dehydratase family JCR18_00420 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR18_00425 PF13579 Glycosyl transferase 4-like domain JCR18_00430 PF01370 NAD dependent epimerase/dehydratase family JCR18_00435 PF00953 Glycosyl transferase family 4 JCR18_00440 PF02397 Bacterial sugar transferase JCR18_00445 PF00483 Nucleotidyl transferase JCR18_00450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR18_00450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR18_00450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR18_00455 PF00342 Phosphoglucose isomerase JCR18_00460 PF16363 GDP-mannose 4,6 dehydratase JCR18_00465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR18_00465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR18_00465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR18_00465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR18_00470 PF02652 L-lactate permease JCR18_00475 PF00392 Bacterial regulatory proteins, gntR family JCR18_00475 PF07729 FCD domain JCR18_00480 PF01070 FMN-dependent dehydrogenase JCR18_00485 PF01565 FAD binding domain JCR18_00485 PF09330 D-lactate dehydrogenase, membrane binding JCR18_00490 PF00155 Aminotransferase class I and II JCR18_00500 PF07729 FCD domain JCR18_00500 PF00392 Bacterial regulatory proteins, gntR family JCR18_00510 PF00285 Citrate synthase, C-terminal domain JCR18_00515 PF00330 Aconitase family (aconitate hydratase) JCR18_00515 PF00694 Aconitase C-terminal domain JCR18_00550 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_00550 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_00555 PF04717 Type VI secretion system, phage-baseplate injector JCR18_00555 PF13296 Putative type VI secretion system Rhs element Vgr JCR18_00555 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR18_00580 PF00849 RNA pseudouridylate synthase JCR18_00595 PF00593 TonB dependent receptor JCR18_00595 PF07715 TonB-dependent Receptor Plug Domain JCR18_00605 PF01037 Lrp/AsnC ligand binding domain JCR18_00610 PF01266 FAD dependent oxidoreductase JCR18_00615 PF00842 Alanine racemase, C-terminal domain JCR18_00615 PF01168 Alanine racemase, N-terminal domain JCR18_00620 PF01042 Endoribonuclease L-PSP JCR18_00625 PF00324 Amino acid permease JCR18_00630 PF00324 Amino acid permease JCR18_00635 PF03466 LysR substrate binding domain JCR18_00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_00640 PF00171 Aldehyde dehydrogenase family JCR18_00645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR18_00645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR18_00650 PF13193 AMP-binding enzyme C-terminal domain JCR18_00650 PF00501 AMP-binding enzyme JCR18_00655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_00655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_00655 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_00660 PF00378 Enoyl-CoA hydratase/isomerase JCR18_00665 PF00378 Enoyl-CoA hydratase/isomerase JCR18_00670 PF00083 Sugar (and other) transporter JCR18_00670 PF07690 Major Facilitator Superfamily JCR18_00675 PF00765 Autoinducer synthase JCR18_00685 PF03472 Autoinducer binding domain JCR18_00685 PF00196 Bacterial regulatory proteins, luxR family JCR18_00690 PF13737 Transposase DDE domain JCR18_00695 PF00501 AMP-binding enzyme JCR18_00700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_00700 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_00700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_00705 PF00975 Thioesterase domain JCR18_00705 PF14765 Polyketide synthase dehydratase JCR18_00705 PF00550 Phosphopantetheine attachment site JCR18_00705 PF08242 Methyltransferase domain JCR18_00705 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_00705 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_00705 PF16197 Ketoacyl-synthetase C-terminal extension JCR18_00710 PF00975 Thioesterase domain JCR18_00710 PF00550 Phosphopantetheine attachment site JCR18_00710 PF00668 Condensation domain JCR18_00710 PF13193 AMP-binding enzyme C-terminal domain JCR18_00710 PF00501 AMP-binding enzyme JCR18_00725 PF16363 GDP-mannose 4,6 dehydratase JCR18_00730 PF01648 4'-phosphopantetheinyl transferase superfamily JCR18_00745 PF01722 BolA-like protein JCR18_00755 PF13614 AAA domain JCR18_00770 PF09335 SNARE associated Golgi protein JCR18_00775 PF07681 DoxX JCR18_00780 PF04286 Protein of unknown function (DUF445) JCR18_00785 PF00117 Glutamine amidotransferase class-I JCR18_00785 PF02540 NAD synthase JCR18_00785 PF00958 GMP synthase C terminal domain JCR18_00790 PF13427 Domain of unknown function (DUF4111) JCR18_00790 PF01909 Nucleotidyltransferase domain JCR18_00795 PF03551 Transcriptional regulator PadR-like family JCR18_00805 PF05726 Pirin C-terminal cupin domain JCR18_00805 PF02678 Pirin JCR18_00825 PF03485 Arginyl tRNA synthetase N terminal domain JCR18_00825 PF05746 DALR anticodon binding domain JCR18_00825 PF00750 tRNA synthetases class I (R) JCR18_00830 PF00390 Malic enzyme, N-terminal domain JCR18_00830 PF03949 Malic enzyme, NAD binding domain JCR18_00835 PF04261 Dyp-type peroxidase family JCR18_00840 PF01810 LysE type translocator JCR18_00845 PF00950 ABC 3 transport family JCR18_00850 PF00005 ABC transporter JCR18_00870 PF00119 ATP synthase A chain JCR18_00875 PF00137 ATP synthase subunit C JCR18_00880 PF00430 ATP synthase B/B' CF(0) JCR18_00885 PF00213 ATP synthase delta (OSCP) subunit JCR18_00890 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR18_00890 PF00306 ATP synthase alpha/beta chain, C terminal domain JCR18_00890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR18_00895 PF00231 ATP synthase JCR18_00900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR18_00900 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR18_00905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCR18_00915 PF00255 Glutathione peroxidase JCR18_00925 PF07690 Major Facilitator Superfamily JCR18_00930 PF00440 Bacterial regulatory proteins, tetR family JCR18_00935 PF00892 EamA-like transporter family JCR18_00940 PF01300 Telomere recombination JCR18_00945 PF17782 DprA winged helix domain JCR18_00945 PF02481 DNA recombination-mediator protein A JCR18_00955 PF01327 Polypeptide deformylase JCR18_00980 PF00440 Bacterial regulatory proteins, tetR family JCR18_01015 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_01025 PF03358 NADPH-dependent FMN reductase JCR18_01045 PF08497 Radical SAM N-terminal JCR18_01045 PF04055 Radical SAM superfamily JCR18_01045 PF11842 Domain of unknown function (DUF3362) JCR18_01060 PF11798 IMS family HHH motif JCR18_01060 PF11799 impB/mucB/samB family C-terminal domain JCR18_01060 PF00817 impB/mucB/samB family JCR18_01070 PF07690 Major Facilitator Superfamily JCR18_01075 PF03641 Possible lysine decarboxylase JCR18_01080 PF03741 Integral membrane protein TerC family JCR18_01080 PF03471 Transporter associated domain JCR18_01085 PF02810 SEC-C motif JCR18_01090 PF03458 UPF0126 domain JCR18_01095 PF07690 Major Facilitator Superfamily JCR18_01100 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR18_01100 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR18_01105 PF00501 AMP-binding enzyme JCR18_01105 PF13193 AMP-binding enzyme C-terminal domain JCR18_01120 PF00719 Inorganic pyrophosphatase JCR18_01125 PF03573 outer membrane porin, OprD family JCR18_01135 PF00701 Dihydrodipicolinate synthetase family JCR18_01145 PF00155 Aminotransferase class I and II JCR18_01145 PF00392 Bacterial regulatory proteins, gntR family JCR18_01150 PF01078 Magnesium chelatase, subunit ChlI JCR18_01150 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR18_01160 PF00665 Integrase core domain JCR18_01180 PF00582 Universal stress protein family JCR18_01185 PF00916 Sulfate permease family JCR18_01185 PF01740 STAS domain JCR18_01195 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR18_01195 PF01078 Magnesium chelatase, subunit ChlI JCR18_01205 PF00543 Nitrogen regulatory protein P-II JCR18_01210 PF00909 Ammonium Transporter Family JCR18_01215 PF03477 ATP cone domain JCR18_01220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCR18_01220 PF01872 RibD C-terminal domain JCR18_01230 PF00677 Lumazine binding domain JCR18_01250 PF00883 Cytosol aminopeptidase family, catalytic domain JCR18_01250 PF02789 Cytosol aminopeptidase family, N-terminal domain JCR18_01260 PF03739 Lipopolysaccharide export system permease LptF/LptG JCR18_01265 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JCR18_01265 PF01676 Metalloenzyme superfamily JCR18_01270 PF00595 PDZ domain JCR18_01270 PF03572 Peptidase family S41 JCR18_01275 PF00158 Sigma-54 interaction domain JCR18_01275 PF00072 Response regulator receiver domain JCR18_01275 PF02954 Bacterial regulatory protein, Fis family JCR18_01280 PF00512 His Kinase A (phospho-acceptor) domain JCR18_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_01285 PF00072 Response regulator receiver domain JCR18_01285 PF00196 Bacterial regulatory proteins, luxR family JCR18_01290 PF00768 D-alanyl-D-alanine carboxypeptidase JCR18_01295 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_01300 PF00742 Homoserine dehydrogenase JCR18_01300 PF03447 Homoserine dehydrogenase, NAD binding domain JCR18_01300 PF01842 ACT domain JCR18_01305 PF10411 Disulfide bond isomerase protein N-terminus JCR18_01305 PF13098 Thioredoxin-like domain JCR18_01310 PF00589 Phage integrase family JCR18_01310 PF02899 Phage integrase, N-terminal SAM-like domain JCR18_01320 PF07664 Ferrous iron transport protein B C terminus JCR18_01320 PF02421 Ferrous iron transport protein B JCR18_01320 PF07670 Nucleoside recognition JCR18_01330 PF02875 Mur ligase family, glutamate ligase domain JCR18_01330 PF08245 Mur ligase middle domain JCR18_01335 PF01098 Cell cycle protein JCR18_01340 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR18_01345 PF01258 Prokaryotic dksA/traR C4-type zinc finger JCR18_01350 PF00149 Calcineurin-like phosphoesterase JCR18_01355 PF00293 NUDIX domain JCR18_01360 PF01964 Radical SAM ThiC family JCR18_01360 PF13667 ThiC-associated domain JCR18_01375 PF00892 EamA-like transporter family JCR18_01380 PF02321 Outer membrane efflux protein JCR18_01385 PF01895 PhoU domain JCR18_01390 PF04362 Bacterial Fe(2+) trafficking JCR18_01395 PF14698 Argininosuccinate lyase C-terminal JCR18_01395 PF00206 Lyase JCR18_01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_01400 PF07694 5TMR of 5TMR-LYT JCR18_01400 PF06580 Histidine kinase JCR18_01405 PF04397 LytTr DNA-binding domain JCR18_01405 PF00072 Response regulator receiver domain JCR18_01410 PF03900 Porphobilinogen deaminase, C-terminal domain JCR18_01410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JCR18_01435 PF00816 H-NS histone family JCR18_01450 PF00263 Bacterial type II and III secretion system protein JCR18_01450 PF03958 Bacterial type II/III secretion system short domain JCR18_01455 PF00498 FHA domain JCR18_01455 PF12401 Protein of unknown function (DUF2662) JCR18_01460 PF13419 Haloacid dehalogenase-like hydrolase JCR18_01465 PF00425 chorismate binding enzyme JCR18_01465 PF04715 Anthranilate synthase component I, N terminal region JCR18_01490 PF03144 Elongation factor Tu domain 2 JCR18_01490 PF03143 Elongation factor Tu C-terminal domain JCR18_01490 PF00009 Elongation factor Tu GTP binding domain JCR18_01500 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCR18_01505 PF02357 Transcription termination factor nusG JCR18_01505 PF00467 KOW motif JCR18_01510 PF03946 Ribosomal protein L11, N-terminal domain JCR18_01510 PF00298 Ribosomal protein L11, RNA binding domain JCR18_01515 PF00687 Ribosomal protein L1p/L10e family JCR18_01520 PF00466 Ribosomal protein L10 JCR18_01525 PF00542 Ribosomal protein L7/L12 C-terminal domain JCR18_01525 PF16320 Ribosomal protein L7/L12 dimerisation domain JCR18_01530 PF04565 RNA polymerase Rpb2, domain 3 JCR18_01530 PF00562 RNA polymerase Rpb2, domain 6 JCR18_01530 PF10385 RNA polymerase beta subunit external 1 domain JCR18_01530 PF04561 RNA polymerase Rpb2, domain 2 JCR18_01530 PF04563 RNA polymerase beta subunit JCR18_01530 PF04560 RNA polymerase Rpb2, domain 7 JCR18_01535 PF04998 RNA polymerase Rpb1, domain 5 JCR18_01535 PF05000 RNA polymerase Rpb1, domain 4 JCR18_01535 PF04983 RNA polymerase Rpb1, domain 3 JCR18_01535 PF00623 RNA polymerase Rpb1, domain 2 JCR18_01535 PF04997 RNA polymerase Rpb1, domain 1 JCR18_01555 PF00561 alpha/beta hydrolase fold JCR18_01560 PF13726 Na+-H+ antiporter family JCR18_01560 PF03553 Na+/H+ antiporter family JCR18_01575 PF00183 Hsp90 protein JCR18_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_01590 PF01323 DSBA-like thioredoxin domain JCR18_01600 PF00376 MerR family regulatory protein JCR18_01600 PF09278 MerR, DNA binding JCR18_01620 PF02803 Thiolase, C-terminal domain JCR18_01620 PF00108 Thiolase, N-terminal domain JCR18_01625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR18_01625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR18_01625 PF00378 Enoyl-CoA hydratase/isomerase JCR18_01645 PF02151 UvrB/uvrC motif JCR18_01645 PF01541 GIY-YIG catalytic domain JCR18_01645 PF08459 UvrC Helix-hairpin-helix N-terminal JCR18_01655 PF01066 CDP-alcohol phosphatidyltransferase JCR18_01660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR18_01660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR18_01660 PF12833 Helix-turn-helix domain JCR18_01660 PF02805 Metal binding domain of Ada JCR18_01685 PF13533 Biotin-lipoyl like JCR18_01690 PF03652 Holliday junction resolvase JCR18_01695 PF02622 Uncharacterized ACR, COG1678 JCR18_01700 PF02463 RecF/RecN/SMC N terminal domain JCR18_01710 PF06865 Pyrimidine/purine nucleoside phosphorylase JCR18_01715 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR18_01715 PF00588 SpoU rRNA Methylase family JCR18_01725 PF01121 Dephospho-CoA kinase JCR18_01730 PF01478 Type IV leader peptidase family JCR18_01730 PF06750 Bacterial Peptidase A24 N-terminal domain JCR18_01735 PF00482 Type II secretion system (T2SS), protein F JCR18_01740 PF00437 Type II/IV secretion system protein JCR18_01740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR18_01745 PF00121 Triosephosphate isomerase JCR18_01750 PF03840 Preprotein translocase SecG subunit JCR18_01770 PF17384 RimP C-terminal SH3 domain JCR18_01770 PF02576 RimP N-terminal domain JCR18_01775 PF08529 NusA N-terminal domain JCR18_01775 PF13184 NusA-like KH domain JCR18_01775 PF00575 S1 RNA binding domain JCR18_01780 PF04760 Translation initiation factor IF-2, N-terminal region JCR18_01780 PF08364 Bacterial translation initiation factor IF-2 associated region JCR18_01780 PF11987 Translation-initiation factor 2 JCR18_01780 PF00009 Elongation factor Tu GTP binding domain JCR18_01785 PF02033 Ribosome-binding factor A JCR18_01790 PF03334 Na+/H+ antiporter subunit JCR18_01795 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JCR18_01800 PF01899 Na+/H+ ion antiporter subunit JCR18_01805 PF00361 Proton-conducting membrane transporter JCR18_01810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR18_01815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR18_01815 PF00361 Proton-conducting membrane transporter JCR18_01815 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JCR18_01815 PF13244 Domain of unknown function (DUF4040) JCR18_01830 PF01502 Phosphoribosyl-AMP cyclohydrolase JCR18_01835 PF01494 FAD binding domain JCR18_01840 PF03109 ABC1 family JCR18_01850 PF01209 ubiE/COQ5 methyltransferase family JCR18_01860 PF03976 Polyphosphate kinase 2 (PPK2) JCR18_01870 PF17946 RecC C-terminal domain JCR18_01875 PF00580 UvrD/REP helicase N-terminal domain JCR18_01875 PF13361 UvrD-like helicase C-terminal domain JCR18_01875 PF12705 PD-(D/E)XK nuclease superfamily JCR18_01880 PF13538 UvrD-like helicase C-terminal domain JCR18_01885 PF00144 Beta-lactamase JCR18_01890 PF00312 Ribosomal protein S15 JCR18_01895 PF00013 KH domain JCR18_01895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCR18_01895 PF01138 3' exoribonuclease family, domain 1 JCR18_01895 PF03725 3' exoribonuclease family, domain 2 JCR18_01895 PF00575 S1 RNA binding domain JCR18_01900 PF01544 CorA-like Mg2+ transporter protein JCR18_01910 PF00226 DnaJ domain JCR18_01910 PF01556 DnaJ C terminal domain JCR18_01920 PF01430 Hsp33 protein JCR18_01925 PF02254 TrkA-N domain JCR18_01925 PF00999 Sodium/hydrogen exchanger family JCR18_01930 PF00270 DEAD/DEAH box helicase JCR18_01930 PF18074 Primosomal protein N C-terminal domain JCR18_01930 PF00271 Helicase conserved C-terminal domain JCR18_01930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCR18_01930 PF17764 3′ DNA-binding domain (3′BD) JCR18_01935 PF00482 Type II secretion system (T2SS), protein F JCR18_01940 PF08334 Type II secretion system (T2SS), protein G JCR18_01940 PF07963 Prokaryotic N-terminal methylation motif JCR18_01950 PF01588 Putative tRNA binding domain JCR18_01955 PF00795 Carbon-nitrogen hydrolase JCR18_01960 PF03471 Transporter associated domain JCR18_01960 PF00571 CBS domain JCR18_01965 PF01206 Sulfurtransferase TusA JCR18_01980 PF01177 Asp/Glu/Hydantoin racemase JCR18_01990 PF00762 Ferrochelatase JCR18_01995 PF00753 Metallo-beta-lactamase superfamily JCR18_02000 PF03884 DNA gyrase inhibitor YacG JCR18_02020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JCR18_02035 PF01197 Ribosomal protein L31 JCR18_02040 PF03109 ABC1 family JCR18_02045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR18_02045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_02050 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR18_02050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_02050 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_02055 PF01554 MatE JCR18_02065 PF06969 HemN C-terminal domain JCR18_02065 PF04055 Radical SAM superfamily JCR18_02070 PF00106 short chain dehydrogenase JCR18_02075 PF03466 LysR substrate binding domain JCR18_02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_02090 PF13193 AMP-binding enzyme C-terminal domain JCR18_02090 PF00501 AMP-binding enzyme JCR18_02095 PF00575 S1 RNA binding domain JCR18_02095 PF10150 Ribonuclease E/G family JCR18_02095 PF12111 Polyribonucleotide phosphorylase C terminal JCR18_02100 PF00849 RNA pseudouridylate synthase JCR18_02100 PF01479 S4 domain JCR18_02105 PF13419 Haloacid dehalogenase-like hydrolase JCR18_02110 PF08279 HTH domain JCR18_02110 PF13280 WYL domain JCR18_02115 PF02798 Glutathione S-transferase, N-terminal domain JCR18_02125 PF03466 LysR substrate binding domain JCR18_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_02130 PF12706 Beta-lactamase superfamily domain JCR18_02135 PF00141 Peroxidase JCR18_02140 PF01590 GAF domain JCR18_02140 PF00391 PEP-utilising enzyme, mobile domain JCR18_02140 PF02896 PEP-utilising enzyme, TIM barrel domain JCR18_02140 PF05524 PEP-utilising enzyme, N-terminal JCR18_02145 PF00293 NUDIX domain JCR18_02170 PF10544 T5orf172 domain JCR18_02175 PF13614 AAA domain JCR18_02195 PF00905 Penicillin binding protein transpeptidase domain JCR18_02215 PF03466 LysR substrate binding domain JCR18_02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_02225 PF00330 Aconitase family (aconitate hydratase) JCR18_02230 PF00694 Aconitase C-terminal domain JCR18_02240 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR18_02255 PF01176 Translation initiation factor 1A / IF-1 JCR18_02265 PF01416 tRNA pseudouridine synthase JCR18_02285 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR18_02285 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR18_02295 PF00375 Sodium:dicarboxylate symporter family JCR18_02305 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR18_02310 PF01810 LysE type translocator JCR18_02315 PF16326 ABC transporter C-terminal domain JCR18_02315 PF12848 ABC transporter JCR18_02315 PF00005 ABC transporter JCR18_02320 PF04102 SlyX JCR18_02325 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_02325 PF00107 Zinc-binding dehydrogenase JCR18_02330 PF01638 HxlR-like helix-turn-helix JCR18_02340 PF08272 Topoisomerase I zinc-ribbon-like JCR18_02340 PF01396 Topoisomerase DNA binding C4 zinc finger JCR18_02340 PF01751 Toprim domain JCR18_02340 PF01131 DNA topoisomerase JCR18_02355 PF00580 UvrD/REP helicase N-terminal domain JCR18_02355 PF13361 UvrD-like helicase C-terminal domain JCR18_02360 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JCR18_02380 PF00999 Sodium/hydrogen exchanger family JCR18_02380 PF02254 TrkA-N domain JCR18_02385 PF00471 Ribosomal protein L33 JCR18_02390 PF00830 Ribosomal L28 family JCR18_02395 PF00171 Aldehyde dehydrogenase family JCR18_02405 PF00551 Formyl transferase JCR18_02405 PF01842 ACT domain JCR18_02415 PF01618 MotA/TolQ/ExbB proton channel family JCR18_02425 PF01625 Peptide methionine sulfoxide reductase JCR18_02435 PF00186 Dihydrofolate reductase JCR18_02440 PF00303 Thymidylate synthase JCR18_02455 PF01790 Prolipoprotein diacylglyceryl transferase JCR18_02475 PF00902 Sec-independent protein translocase protein (TatC) JCR18_02480 PF02416 mttA/Hcf106 family JCR18_02485 PF02416 mttA/Hcf106 family JCR18_02495 PF01725 Ham1 family JCR18_02505 PF00561 alpha/beta hydrolase fold JCR18_02505 PF07021 Methionine biosynthesis protein MetW JCR18_02510 PF00561 alpha/beta hydrolase fold JCR18_02515 PF00682 HMGL-like JCR18_02515 PF08502 LeuA allosteric (dimerisation) domain JCR18_02520 PF18331 PKHD-type hydroxylase C-terminal domain JCR18_02520 PF13640 2OG-Fe(II) oxygenase superfamily JCR18_02525 PF07715 TonB-dependent Receptor Plug Domain JCR18_02525 PF00593 TonB dependent receptor JCR18_02530 PF05698 Bacterial trigger factor protein (TF) C-terminus JCR18_02530 PF05697 Bacterial trigger factor protein (TF) JCR18_02530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR18_02535 PF00574 Clp protease JCR18_02540 PF10431 C-terminal, D2-small domain, of ClpB protein JCR18_02540 PF07724 AAA domain (Cdc48 subfamily) JCR18_02540 PF06689 ClpX C4-type zinc finger JCR18_02555 PF05683 Fumarase C-terminus JCR18_02555 PF05681 Fumarate hydratase (Fumerase) JCR18_02560 PF07085 DRTGG domain JCR18_02560 PF01515 Phosphate acetyl/butaryl transferase JCR18_02565 PF00871 Acetokinase family JCR18_02575 PF00920 Dehydratase family JCR18_02580 PF01081 KDPG and KHG aldolase JCR18_02585 PF02447 GntP family permease JCR18_02590 PF01202 Shikimate kinase JCR18_02595 PF00171 Aldehyde dehydrogenase family JCR18_02600 PF00171 Aldehyde dehydrogenase family JCR18_02605 PF00561 alpha/beta hydrolase fold JCR18_02615 PF00933 Glycosyl hydrolase family 3 N terminal domain JCR18_02620 PF11818 C-terminal domain of tail specific protease (DUF3340) JCR18_02620 PF17804 Tail specific protease N-terminal domain JCR18_02620 PF00595 PDZ domain JCR18_02620 PF03572 Peptidase family S41 JCR18_02625 PF00534 Glycosyl transferases group 1 JCR18_02625 PF13439 Glycosyltransferase Family 4 JCR18_02630 PF01569 PAP2 superfamily JCR18_02635 PF04384 Iron-sulphur cluster assembly JCR18_02640 PF00334 Nucleoside diphosphate kinase JCR18_02645 PF04055 Radical SAM superfamily JCR18_02655 PF13464 Domain of unknown function (DUF4115) JCR18_02660 PF04551 GcpE protein JCR18_02665 PF13393 Histidyl-tRNA synthetase JCR18_02665 PF03129 Anticodon binding domain JCR18_02675 PF13360 PQQ-like domain JCR18_02680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCR18_02680 PF01926 50S ribosome-binding GTPase JCR18_02695 PF00550 Phosphopantetheine attachment site JCR18_02700 PF00550 Phosphopantetheine attachment site JCR18_02710 PF13193 AMP-binding enzyme C-terminal domain JCR18_02710 PF00501 AMP-binding enzyme JCR18_02725 PF00221 Aromatic amino acid lyase JCR18_02745 PF04820 Tryptophan halogenase JCR18_02755 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_02755 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_02770 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_02770 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_02785 PF02556 Preprotein translocase subunit SecB JCR18_02790 PF00462 Glutaredoxin JCR18_02800 PF03193 RsgA GTPase JCR18_02805 PF00929 Exonuclease JCR18_02820 PF02321 Outer membrane efflux protein JCR18_02825 PF00005 ABC transporter JCR18_02825 PF12704 MacB-like periplasmic core domain JCR18_02825 PF02687 FtsX-like permease family JCR18_02830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_02845 PF00133 tRNA synthetases class I (I, L, M and V) JCR18_02845 PF09334 tRNA synthetases class I (M) JCR18_02845 PF08264 Anticodon-binding domain of tRNA JCR18_02845 PF13603 Leucyl-tRNA synthetase, Domain 2 JCR18_02855 PF00205 Thiamine pyrophosphate enzyme, central domain JCR18_02855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR18_02855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR18_02860 PF10369 Small subunit of acetolactate synthase JCR18_02865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JCR18_02865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JCR18_02870 PF00990 Diguanylate cyclase, GGDEF domain JCR18_02870 PF00563 EAL domain JCR18_02870 PF03707 Bacterial signalling protein N terminal repeat JCR18_02890 PF16658 Class II release factor RF3, C-terminal domain JCR18_02890 PF00009 Elongation factor Tu GTP binding domain JCR18_02890 PF03144 Elongation factor Tu domain 2 JCR18_02905 PF01026 TatD related DNase JCR18_02910 PF00694 Aconitase C-terminal domain JCR18_02910 PF00330 Aconitase family (aconitate hydratase) JCR18_02920 PF00899 ThiF family JCR18_02930 PF03466 LysR substrate binding domain JCR18_02930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_02940 PF01207 Dihydrouridine synthase (Dus) JCR18_02945 PF07690 Major Facilitator Superfamily JCR18_02955 PF00892 EamA-like transporter family JCR18_02960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCR18_02960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCR18_02965 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JCR18_02970 PF02233 NAD(P) transhydrogenase beta subunit JCR18_02975 PF00106 short chain dehydrogenase JCR18_02985 PF01261 Xylose isomerase-like TIM barrel JCR18_02990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR18_02990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR18_02995 PF00378 Enoyl-CoA hydratase/isomerase JCR18_03000 PF00512 His Kinase A (phospho-acceptor) domain JCR18_03000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JCR18_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_03000 PF00072 Response regulator receiver domain JCR18_03000 PF01627 Hpt domain JCR18_03000 PF00672 HAMP domain JCR18_03005 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_03015 PF05958 tRNA (Uracil-5-)-methyltransferase JCR18_03020 PF04607 Region found in RelA / SpoT proteins JCR18_03020 PF13291 ACT domain JCR18_03020 PF02824 TGS domain JCR18_03030 PF03819 MazG nucleotide pyrophosphohydrolase domain JCR18_03040 PF12626 Polymerase A arginine-rich C-terminus JCR18_03040 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR18_03040 PF01743 Poly A polymerase head domain JCR18_03045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCR18_03050 PF02548 Ketopantoate hydroxymethyltransferase JCR18_03055 PF02569 Pantoate-beta-alanine ligase JCR18_03060 PF03668 P-loop ATPase protein family JCR18_03065 PF00381 PTS HPr component phosphorylation site JCR18_03070 PF04751 Protein of unknown function (DUF615) JCR18_03075 PF00501 AMP-binding enzyme JCR18_03075 PF13193 AMP-binding enzyme C-terminal domain JCR18_03080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR18_03080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR18_03080 PF02824 TGS domain JCR18_03080 PF03129 Anticodon binding domain JCR18_03085 PF00707 Translation initiation factor IF-3, C-terminal domain JCR18_03085 PF05198 Translation initiation factor IF-3, N-terminal domain JCR18_03090 PF00043 Glutathione S-transferase, C-terminal domain JCR18_03090 PF02798 Glutathione S-transferase, N-terminal domain JCR18_03095 PF09335 SNARE associated Golgi protein JCR18_03100 PF07690 Major Facilitator Superfamily JCR18_03105 PF01632 Ribosomal protein L35 JCR18_03110 PF00453 Ribosomal protein L20 JCR18_03130 PF01409 tRNA synthetases class II core domain (F) JCR18_03130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCR18_03135 PF03147 Ferredoxin-fold anticodon binding domain JCR18_03135 PF03484 tRNA synthetase B5 domain JCR18_03135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCR18_03135 PF01588 Putative tRNA binding domain JCR18_03135 PF03483 B3/4 domain JCR18_03140 PF00216 Bacterial DNA-binding protein JCR18_03155 PF07498 Rho termination factor, N-terminal domain JCR18_03155 PF07497 Rho termination factor, RNA-binding domain JCR18_03155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR18_03160 PF00085 Thioredoxin JCR18_03165 PF02541 Ppx/GppA phosphatase family JCR18_03170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCR18_03175 PF01171 PP-loop family JCR18_03175 PF09179 TilS substrate binding domain JCR18_03175 PF11734 TilS substrate C-terminal domain JCR18_03180 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR18_03180 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR18_03185 PF02325 YGGT family JCR18_03190 PF01612 3'-5' exonuclease JCR18_03190 PF00476 DNA polymerase family A JCR18_03190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCR18_03190 PF01367 5'-3' exonuclease, C-terminal SAM fold JCR18_03210 PF00437 Type II/IV secretion system protein JCR18_03215 PF02566 OsmC-like protein JCR18_03220 PF01047 MarR family JCR18_03230 PF00795 Carbon-nitrogen hydrolase JCR18_03275 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCR18_03275 PF04963 Sigma-54 factor, core binding domain JCR18_03275 PF04552 Sigma-54, DNA binding domain JCR18_03280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCR18_03285 PF01722 BolA-like protein JCR18_03290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR18_03295 PF01634 ATP phosphoribosyltransferase JCR18_03300 PF00815 Histidinol dehydrogenase JCR18_03305 PF00155 Aminotransferase class I and II JCR18_03310 PF04715 Anthranilate synthase component I, N terminal region JCR18_03310 PF00425 chorismate binding enzyme JCR18_03350 PF00293 NUDIX domain JCR18_03355 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_03360 PF00814 Glycoprotease family JCR18_03365 PF04445 Putative SAM-dependent methyltransferase JCR18_03375 PF00756 Putative esterase JCR18_03385 PF00834 Ribulose-phosphate 3 epimerase family JCR18_03400 PF07731 Multicopper oxidase JCR18_03400 PF00394 Multicopper oxidase JCR18_03400 PF07732 Multicopper oxidase JCR18_03405 PF05275 Copper resistance protein B precursor (CopB) JCR18_03415 PF00893 Small Multidrug Resistance protein JCR18_03420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR18_03420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR18_03425 PF01960 ArgJ family JCR18_03430 PF02445 Quinolinate synthetase A protein JCR18_03455 PF00962 Adenosine/AMP deaminase JCR18_03460 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_03460 PF00107 Zinc-binding dehydrogenase JCR18_03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_03465 PF03466 LysR substrate binding domain JCR18_03470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_03470 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_03470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_03475 PF07690 Major Facilitator Superfamily JCR18_03480 PF02515 CoA-transferase family III JCR18_03490 PF00890 FAD binding domain JCR18_03490 PF14537 Cytochrome c3 JCR18_03495 PF03466 LysR substrate binding domain JCR18_03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_03505 PF07690 Major Facilitator Superfamily JCR18_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_03510 PF03466 LysR substrate binding domain JCR18_03520 PF07687 Peptidase dimerisation domain JCR18_03520 PF01546 Peptidase family M20/M25/M40 JCR18_03525 PF12833 Helix-turn-helix domain JCR18_03525 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR18_03535 PF01810 LysE type translocator JCR18_03540 PF03466 LysR substrate binding domain JCR18_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_03550 PF08267 Cobalamin-independent synthase, N-terminal domain JCR18_03550 PF01717 Cobalamin-independent synthase, Catalytic domain JCR18_03555 PF01613 Flavin reductase like domain JCR18_03565 PF00905 Penicillin binding protein transpeptidase domain JCR18_03585 PF13614 AAA domain JCR18_03590 PF10544 T5orf172 domain JCR18_03625 PF02567 Phenazine biosynthesis-like protein JCR18_03640 PF13737 Transposase DDE domain JCR18_03655 PF13360 PQQ-like domain JCR18_03655 PF01011 PQQ enzyme repeat JCR18_03695 PF13737 Transposase DDE domain JCR18_03735 PF13756 Stimulus-sensing domain JCR18_03735 PF13755 Sensor N-terminal transmembrane domain JCR18_03735 PF00512 His Kinase A (phospho-acceptor) domain JCR18_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_03735 PF00672 HAMP domain JCR18_03745 PF00268 Ribonucleotide reductase, small chain JCR18_03755 PF03477 ATP cone domain JCR18_03755 PF00317 Ribonucleotide reductase, all-alpha domain JCR18_03755 PF02867 Ribonucleotide reductase, barrel domain JCR18_03765 PF00072 Response regulator receiver domain JCR18_03765 PF00486 Transcriptional regulatory protein, C terminal JCR18_03770 PF00512 His Kinase A (phospho-acceptor) domain JCR18_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_03770 PF00672 HAMP domain JCR18_03780 PF00990 Diguanylate cyclase, GGDEF domain JCR18_03780 PF17151 Periplasmic sensor domain JCR18_03785 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JCR18_03790 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JCR18_03795 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JCR18_03795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JCR18_03805 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JCR18_03805 PF10531 SLBB domain JCR18_03805 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JCR18_03810 PF00384 Molybdopterin oxidoreductase JCR18_03810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JCR18_03810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR18_03815 PF00146 NADH dehydrogenase JCR18_03820 PF12838 4Fe-4S dicluster domain JCR18_03825 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JCR18_03830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR18_03835 PF00361 Proton-conducting membrane transporter JCR18_03835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR18_03840 PF00361 Proton-conducting membrane transporter JCR18_03845 PF00361 Proton-conducting membrane transporter JCR18_03855 PF00313 'Cold-shock' DNA-binding domain JCR18_03860 PF03466 LysR substrate binding domain JCR18_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_03865 PF00175 Oxidoreductase NAD-binding domain JCR18_03865 PF00970 Oxidoreductase FAD-binding domain JCR18_03880 PF05552 Conserved TM helix JCR18_03895 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_03900 PF13533 Biotin-lipoyl like JCR18_03925 PF01588 Putative tRNA binding domain JCR18_03925 PF09334 tRNA synthetases class I (M) JCR18_03935 PF10609 NUBPL iron-transfer P-loop NTPase JCR18_03940 PF01048 Phosphorylase superfamily JCR18_03955 PF00692 dUTPase JCR18_03985 PF01207 Dihydrouridine synthase (Dus) JCR18_03995 PF02978 Signal peptide binding domain JCR18_03995 PF00448 SRP54-type protein, GTPase domain JCR18_03995 PF02881 SRP54-type protein, helical bundle domain JCR18_04000 PF03309 Type III pantothenate kinase JCR18_04010 PF01925 Sulfite exporter TauE/SafE JCR18_04020 PF06470 SMC proteins Flexible Hinge Domain JCR18_04020 PF02463 RecF/RecN/SMC N terminal domain JCR18_04030 PF01653 NAD-dependent DNA ligase adenylation domain JCR18_04030 PF03120 NAD-dependent DNA ligase OB-fold domain JCR18_04030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCR18_04030 PF12826 Helix-hairpin-helix motif JCR18_04030 PF00533 BRCA1 C Terminus (BRCT) domain JCR18_04035 PF00210 Ferritin-like domain JCR18_04040 PF07690 Major Facilitator Superfamily JCR18_04045 PF00982 Glycosyltransferase family 20 JCR18_04050 PF02358 Trehalose-phosphatase JCR18_04055 PF12697 Alpha/beta hydrolase family JCR18_04055 PF08241 Methyltransferase domain JCR18_04060 PF06968 Biotin and Thiamin Synthesis associated domain JCR18_04060 PF00202 Aminotransferase class-III JCR18_04060 PF04055 Radical SAM superfamily JCR18_04065 PF00155 Aminotransferase class I and II JCR18_04080 PF01479 S4 domain JCR18_04080 PF00849 RNA pseudouridylate synthase JCR18_04085 PF04079 Segregation and condensation complex subunit ScpB JCR18_04090 PF02616 Segregation and condensation protein ScpA JCR18_04095 PF01300 Telomere recombination JCR18_04100 PF04315 Elongation factor P hydroxylase JCR18_04105 PF02620 Large ribosomal RNA subunit accumulation protein YceD JCR18_04110 PF01783 Ribosomal L32p protein family JCR18_04115 PF00698 Acyl transferase domain JCR18_04125 PF00550 Phosphopantetheine attachment site JCR18_04130 PF04972 BON domain JCR18_04130 PF01476 LysM domain JCR18_04135 PF02581 Thiamine monophosphate synthase JCR18_04135 PF08543 Phosphomethylpyrimidine kinase JCR18_04135 PF03070 TENA/THI-4/PQQC family JCR18_04145 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR18_04160 PF02261 Aspartate decarboxylase JCR18_04165 PF01195 Peptidyl-tRNA hydrolase JCR18_04170 PF01386 Ribosomal L25p family JCR18_04175 PF14572 Phosphoribosyl synthetase-associated domain JCR18_04175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR18_04200 PF08544 GHMP kinases C terminal JCR18_04200 PF00288 GHMP kinases N terminal domain JCR18_04205 PF03550 Outer membrane lipoprotein LolB JCR18_04215 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JCR18_04215 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JCR18_04215 PF01488 Shikimate / quinate 5-dehydrogenase JCR18_04220 PF08278 DNA primase DnaG DnaB-binding JCR18_04220 PF08275 DNA primase catalytic core, N-terminal domain JCR18_04220 PF01807 CHC2 zinc finger JCR18_04220 PF10410 DnaB-helicase binding domain of primase JCR18_04225 PF13525 Outer membrane lipoprotein JCR18_04230 PF00849 RNA pseudouridylate synthase JCR18_04230 PF01479 S4 domain JCR18_04235 PF02578 Multi-copper polyphenol oxidoreductase laccase JCR18_04240 PF03358 NADPH-dependent FMN reductase JCR18_04245 PF01668 SmpB protein JCR18_04250 PF01467 Cytidylyltransferase-like JCR18_04255 PF00037 4Fe-4S binding domain JCR18_04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_04275 PF03466 LysR substrate binding domain JCR18_04280 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR18_04285 PF02028 BCCT, betaine/carnitine/choline family transporter JCR18_04290 PF07859 alpha/beta hydrolase fold JCR18_04295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR18_04295 PF00355 Rieske [2Fe-2S] domain JCR18_04300 PF00171 Aldehyde dehydrogenase family JCR18_04305 PF00970 Oxidoreductase FAD-binding domain JCR18_04305 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_04305 PF00175 Oxidoreductase NAD-binding domain JCR18_04320 PF00795 Carbon-nitrogen hydrolase JCR18_04320 PF02540 NAD synthase JCR18_04330 PF05726 Pirin C-terminal cupin domain JCR18_04330 PF02678 Pirin JCR18_04335 PF03653 Uncharacterised protein family (UPF0093) JCR18_04340 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_04340 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_04350 PF00164 Ribosomal protein S12/S23 JCR18_04355 PF00177 Ribosomal protein S7p/S5e JCR18_04360 PF00679 Elongation factor G C-terminus JCR18_04360 PF14492 Elongation Factor G, domain II JCR18_04360 PF03764 Elongation factor G, domain IV JCR18_04360 PF00009 Elongation factor Tu GTP binding domain JCR18_04360 PF03144 Elongation factor Tu domain 2 JCR18_04365 PF03144 Elongation factor Tu domain 2 JCR18_04365 PF00009 Elongation factor Tu GTP binding domain JCR18_04365 PF03143 Elongation factor Tu C-terminal domain JCR18_04385 PF00583 Acetyltransferase (GNAT) family JCR18_04390 PF04377 Arginine-tRNA-protein transferase, C terminus JCR18_04390 PF04376 Arginine-tRNA-protein transferase, N terminus JCR18_04395 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JCR18_04400 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_04405 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JCR18_04405 PF17854 FtsK alpha domain JCR18_04405 PF09397 Ftsk gamma domain JCR18_04405 PF01580 FtsK/SpoIIIE family JCR18_04410 PF01810 LysE type translocator JCR18_04430 PF03776 Septum formation topological specificity factor MinE JCR18_04435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCR18_04440 PF03775 Septum formation inhibitor MinC, C-terminal domain JCR18_04450 PF01553 Acyltransferase JCR18_04455 PF13488 Glycine zipper JCR18_04455 PF00691 OmpA family JCR18_04460 PF13361 UvrD-like helicase C-terminal domain JCR18_04460 PF00580 UvrD/REP helicase N-terminal domain JCR18_04465 PF00692 dUTPase JCR18_04470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR18_04470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR18_04470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR18_04470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR18_04475 PF00696 Amino acid kinase family JCR18_04485 PF13230 Glutamine amidotransferases class-II JCR18_04490 PF01814 Hemerythrin HHE cation binding domain JCR18_04500 PF03658 RnfH family Ubiquitin JCR18_04505 PF04355 SmpA / OmlA family JCR18_04510 PF01475 Ferric uptake regulator family JCR18_04515 PF00437 Type II/IV secretion system protein JCR18_04520 PF00437 Type II/IV secretion system protein JCR18_04525 PF01168 Alanine racemase, N-terminal domain JCR18_04535 PF00149 Calcineurin-like phosphoesterase JCR18_04535 PF12320 Type 5 capsule protein repressor C-terminal domain JCR18_04555 PF08338 Domain of unknown function (DUF1731) JCR18_04555 PF01370 NAD dependent epimerase/dehydratase family JCR18_04560 PF01266 FAD dependent oxidoreductase JCR18_04565 PF00490 Delta-aminolevulinic acid dehydratase JCR18_04570 PF03061 Thioesterase superfamily JCR18_04575 PF13533 Biotin-lipoyl like JCR18_04580 PF07690 Major Facilitator Superfamily JCR18_04615 PF13737 Transposase DDE domain JCR18_04685 PF01381 Helix-turn-helix JCR18_04740 PF01555 DNA methylase JCR18_04750 PF01695 IstB-like ATP binding protein JCR18_04955 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JCR18_04995 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR18_04995 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR18_04995 PF02767 DNA polymerase III beta subunit, central domain JCR18_05125 PF00083 Sugar (and other) transporter JCR18_05130 PF00701 Dihydrodipicolinate synthetase family JCR18_05140 PF08281 Sigma-70, region 4 JCR18_05140 PF04542 Sigma-70 region 2 JCR18_05150 PF07715 TonB-dependent Receptor Plug Domain JCR18_05150 PF00593 TonB dependent receptor JCR18_05160 PF04575 Protein of unknown function (DUF560) JCR18_05170 PF01126 Heme oxygenase JCR18_05195 PF13520 Amino acid permease JCR18_05200 PF02574 Homocysteine S-methyltransferase JCR18_05210 PF06039 Malate:quinone oxidoreductase (Mqo) JCR18_05215 PF05199 GMC oxidoreductase JCR18_05215 PF00732 GMC oxidoreductase JCR18_05220 PF00171 Aldehyde dehydrogenase family JCR18_05225 PF00440 Bacterial regulatory proteins, tetR family JCR18_05225 PF13977 BetI-type transcriptional repressor, C-terminal JCR18_05230 PF02028 BCCT, betaine/carnitine/choline family transporter JCR18_05235 PF02028 BCCT, betaine/carnitine/choline family transporter JCR18_05245 PF03061 Thioesterase superfamily JCR18_05255 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR18_05255 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR18_05260 PF00375 Sodium:dicarboxylate symporter family JCR18_05265 PF07152 YaeQ protein JCR18_05270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR18_05275 PF14883 Hypothetical glycosyl hydrolase family 13 JCR18_05275 PF01522 Polysaccharide deacetylase JCR18_05280 PF00535 Glycosyl transferase family 2 JCR18_05290 PF00378 Enoyl-CoA hydratase/isomerase JCR18_05305 PF01614 Bacterial transcriptional regulator JCR18_05305 PF09339 IclR helix-turn-helix domain JCR18_05310 PF00355 Rieske [2Fe-2S] domain JCR18_05320 PF00355 Rieske [2Fe-2S] domain JCR18_05330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR18_05335 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_05335 PF14759 Reductase C-terminal JCR18_05340 PF07690 Major Facilitator Superfamily JCR18_05350 PF12697 Alpha/beta hydrolase family JCR18_05360 PF03447 Homoserine dehydrogenase, NAD binding domain JCR18_05360 PF01958 Domain of unknown function DUF108 JCR18_05365 PF00171 Aldehyde dehydrogenase family JCR18_05370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR18_05370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR18_05370 PF00205 Thiamine pyrophosphate enzyme, central domain JCR18_05380 PF07690 Major Facilitator Superfamily JCR18_05385 PF01327 Polypeptide deformylase JCR18_05390 PF04960 Glutaminase JCR18_05395 PF12833 Helix-turn-helix domain JCR18_05395 PF02311 AraC-like ligand binding domain JCR18_05400 PF07690 Major Facilitator Superfamily JCR18_05405 PF01263 Aldose 1-epimerase JCR18_05415 PF03466 LysR substrate binding domain JCR18_05415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_05425 PF07690 Major Facilitator Superfamily JCR18_05430 PF00456 Transketolase, thiamine diphosphate binding domain JCR18_05435 PF02780 Transketolase, C-terminal domain JCR18_05435 PF02779 Transketolase, pyrimidine binding domain JCR18_05440 PF02607 B12 binding domain JCR18_05440 PF00809 Pterin binding enzyme JCR18_05440 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCR18_05440 PF02310 B12 binding domain JCR18_05440 PF02574 Homocysteine S-methyltransferase JCR18_05445 PF01384 Phosphate transporter family JCR18_05450 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_05465 PF03781 Sulfatase-modifying factor enzyme 1 JCR18_05470 PF00884 Sulfatase JCR18_05480 PF01106 NifU-like domain JCR18_05480 PF01521 Iron-sulphur cluster biosynthesis JCR18_05485 PF00593 TonB dependent receptor JCR18_05485 PF07715 TonB-dependent Receptor Plug Domain JCR18_05495 PF00561 alpha/beta hydrolase fold JCR18_05500 PF00484 Carbonic anhydrase JCR18_05505 PF13472 GDSL-like Lipase/Acylhydrolase family JCR18_05510 PF00005 ABC transporter JCR18_05520 PF01694 Rhomboid family JCR18_05525 PF00912 Transglycosylase JCR18_05530 PF13089 Polyphosphate kinase N-terminal domain JCR18_05530 PF17941 Polyphosphate kinase C-terminal domain 1 JCR18_05530 PF13090 Polyphosphate kinase C-terminal domain 2 JCR18_05530 PF02503 Polyphosphate kinase middle domain JCR18_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_05540 PF03466 LysR substrate binding domain JCR18_05545 PF00561 alpha/beta hydrolase fold JCR18_05550 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_05550 PF18113 Rubredoxin binding C-terminal domain JCR18_05555 PF00301 Rubredoxin JCR18_05570 PF01336 OB-fold nucleic acid binding domain JCR18_05570 PF00152 tRNA synthetases class II (D, K and N) JCR18_05575 PF14052 Capsule assembly protein Wzi JCR18_05585 PF01507 Phosphoadenosine phosphosulfate reductase family JCR18_05590 PF00009 Elongation factor Tu GTP binding domain JCR18_05605 PF03600 Citrate transporter JCR18_05610 PF01595 Cyclin M transmembrane N-terminal domain JCR18_05610 PF03471 Transporter associated domain JCR18_05610 PF00571 CBS domain JCR18_05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_05615 PF03466 LysR substrate binding domain JCR18_05620 PF00463 Isocitrate lyase family JCR18_05635 PF01774 UreD urease accessory protein JCR18_05640 PF00547 Urease, gamma subunit JCR18_05645 PF00699 Urease beta subunit JCR18_05650 PF01979 Amidohydrolase family JCR18_05650 PF00449 Urease alpha-subunit, N-terminal domain JCR18_05655 PF02814 UreE urease accessory protein, N-terminal domain JCR18_05655 PF05194 UreE urease accessory protein, C-terminal domain JCR18_05660 PF01730 UreF JCR18_05665 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR18_05680 PF00905 Penicillin binding protein transpeptidase domain JCR18_05680 PF03717 Penicillin-binding Protein dimerisation domain JCR18_05695 PF05191 Adenylate kinase, active site lid JCR18_05705 PF10576 Iron-sulfur binding domain of endonuclease III JCR18_05705 PF00633 Helix-hairpin-helix motif JCR18_05705 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR18_05710 PF04060 Putative Fe-S cluster JCR18_05715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR18_05715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR18_05725 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JCR18_05730 PF02590 Predicted SPOUT methyltransferase JCR18_05735 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR18_05735 PF00004 ATPase family associated with various cellular activities (AAA) JCR18_05735 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCR18_05740 PF05662 Coiled stalk of trimeric autotransporter adhesin JCR18_05740 PF05658 Head domain of trimeric autotransporter adhesin JCR18_05740 PF03895 YadA-like membrane anchor domain JCR18_05740 PF13018 Extended Signal Peptide of Type V secretion system JCR18_05745 PF00691 OmpA family JCR18_05745 PF04355 SmpA / OmlA family JCR18_05750 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCR18_06075 PF01551 Peptidase family M23 JCR18_06075 PF08525 Opacity-associated protein A N-terminal motif JCR18_06075 PF01476 LysM domain JCR18_06120 PF00884 Sulfatase JCR18_06120 PF08019 Phosphoethanolamine transferase EptA/EptB JCR18_06160 PF00557 Metallopeptidase family M24 JCR18_06160 PF05195 Aminopeptidase P, N-terminal domain JCR18_06165 PF01494 FAD binding domain JCR18_06170 PF01494 FAD binding domain JCR18_06180 PF13411 MerR HTH family regulatory protein JCR18_06190 PF01810 LysE type translocator JCR18_06195 PF03466 LysR substrate binding domain JCR18_06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_06205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR18_06210 PF02021 Uncharacterised protein family UPF0102 JCR18_06215 PF04972 BON domain JCR18_06225 PF00293 NUDIX domain JCR18_06225 PF09297 NADH pyrophosphatase zinc ribbon domain JCR18_06235 PF00929 Exonuclease JCR18_06240 PF01464 Transglycosylase SLT domain JCR18_06240 PF01476 LysM domain JCR18_06240 PF01464 Transglycosylase SLT domain JCR18_06240 PF01476 LysM domain JCR18_06245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCR18_06250 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_06255 PF12911 N-terminal TM domain of oligopeptide transport permease C JCR18_06255 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_06260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR18_06260 PF00005 ABC transporter JCR18_06265 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_06265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR18_06270 PF07715 TonB-dependent Receptor Plug Domain JCR18_06270 PF00593 TonB dependent receptor JCR18_06280 PF00929 Exonuclease JCR18_06285 PF01979 Amidohydrolase family JCR18_06290 PF00360 Phytochrome region JCR18_06290 PF01590 GAF domain JCR18_06290 PF00563 EAL domain JCR18_06290 PF00990 Diguanylate cyclase, GGDEF domain JCR18_06295 PF00764 Arginosuccinate synthase JCR18_06300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR18_06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_06315 PF05987 Bacterial protein of unknown function (DUF898) JCR18_06320 PF03180 NLPA lipoprotein JCR18_06340 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR18_06340 PF04717 Type VI secretion system, phage-baseplate injector JCR18_06340 PF13296 Putative type VI secretion system Rhs element Vgr JCR18_06350 PF13610 DDE domain JCR18_06360 PF00106 short chain dehydrogenase JCR18_06370 PF00440 Bacterial regulatory proteins, tetR family JCR18_06370 PF17932 Tetracyclin repressor-like, C-terminal domain JCR18_06375 PF17954 Quercetinase C-terminal cupin domain JCR18_06375 PF02678 Pirin JCR18_06385 PF00106 short chain dehydrogenase JCR18_06390 PF00743 Flavin-binding monooxygenase-like JCR18_06400 PF00860 Permease family JCR18_06405 PF00962 Adenosine/AMP deaminase JCR18_06410 PF01292 Prokaryotic cytochrome b561 JCR18_06420 PF01351 Ribonuclease HII JCR18_06425 PF02599 Global regulator protein family JCR18_06430 PF13840 ACT domain JCR18_06430 PF01842 ACT domain JCR18_06430 PF00696 Amino acid kinase family JCR18_06435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR18_06435 PF01411 tRNA synthetases class II (A) JCR18_06435 PF02272 DHHA1 domain JCR18_06440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR18_06440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR18_06445 PF13393 Histidyl-tRNA synthetase JCR18_06450 PF00709 Adenylosuccinate synthetase JCR18_06465 PF00248 Aldo/keto reductase family JCR18_06475 PF13545 Crp-like helix-turn-helix domain JCR18_06475 PF00027 Cyclic nucleotide-binding domain JCR18_06485 PF02566 OsmC-like protein JCR18_06500 PF10431 C-terminal, D2-small domain, of ClpB protein JCR18_06500 PF17871 AAA lid domain JCR18_06500 PF00004 ATPase family associated with various cellular activities (AAA) JCR18_06500 PF02861 Clp amino terminal domain, pathogenicity island component JCR18_06500 PF07724 AAA domain (Cdc48 subfamily) JCR18_06515 PF10672 S-adenosylmethionine-dependent methyltransferase JCR18_06515 PF01170 Putative RNA methylase family UPF0020 JCR18_06515 PF02926 THUMP domain JCR18_06525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR18_06525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR18_06530 PF01979 Amidohydrolase family JCR18_06535 PF13488 Glycine zipper JCR18_06535 PF00691 OmpA family JCR18_06545 PF13417 Glutathione S-transferase, N-terminal domain JCR18_06545 PF00043 Glutathione S-transferase, C-terminal domain JCR18_06550 PF02390 Putative methyltransferase JCR18_06560 PF00043 Glutathione S-transferase, C-terminal domain JCR18_06560 PF02798 Glutathione S-transferase, N-terminal domain JCR18_06570 PF13192 Thioredoxin domain JCR18_06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_06590 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR18_06590 PF00578 AhpC/TSA family JCR18_06595 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JCR18_06595 PF00271 Helicase conserved C-terminal domain JCR18_06595 PF04408 Helicase associated domain (HA2) JCR18_06595 PF00270 DEAD/DEAH box helicase JCR18_06595 PF11898 Domain of unknown function (DUF3418) JCR18_06600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCR18_06600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCR18_06610 PF07690 Major Facilitator Superfamily JCR18_06615 PF03594 Benzoate membrane transport protein JCR18_06620 PF00106 short chain dehydrogenase JCR18_06625 PF00970 Oxidoreductase FAD-binding domain JCR18_06625 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_06625 PF00175 Oxidoreductase NAD-binding domain JCR18_06630 PF00866 Ring hydroxylating beta subunit JCR18_06635 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR18_06635 PF00355 Rieske [2Fe-2S] domain JCR18_06640 PF03466 LysR substrate binding domain JCR18_06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_06650 PF00403 Heavy-metal-associated domain JCR18_06655 PF09278 MerR, DNA binding JCR18_06655 PF00376 MerR family regulatory protein JCR18_06690 PF02601 Exonuclease VII, large subunit JCR18_06690 PF13742 OB-fold nucleic acid binding domain JCR18_06720 PF01810 LysE type translocator JCR18_06725 PF00313 'Cold-shock' DNA-binding domain JCR18_06735 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR18_06735 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR18_06760 PF07690 Major Facilitator Superfamily JCR18_06765 PF01638 HxlR-like helix-turn-helix JCR18_06770 PF13737 Transposase DDE domain JCR18_06795 PF01406 tRNA synthetases class I (C) catalytic domain JCR18_06795 PF09190 DALR domain JCR18_06800 PF01380 SIS domain JCR18_06800 PF00571 CBS domain JCR18_06815 PF03968 OstA-like protein JCR18_06820 PF00005 ABC transporter JCR18_06820 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCR18_06825 PF02321 Outer membrane efflux protein JCR18_06830 PF00005 ABC transporter JCR18_06830 PF03412 Peptidase C39 family JCR18_06830 PF00664 ABC transporter transmembrane region JCR18_06840 PF01205 Uncharacterized protein family UPF0029 JCR18_06845 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_06855 PF01596 O-methyltransferase JCR18_06865 PF11953 Domain of unknown function (DUF3470) JCR18_06865 PF00037 4Fe-4S binding domain JCR18_06875 PF01624 MutS domain I JCR18_06875 PF05188 MutS domain II JCR18_06875 PF05190 MutS family domain IV JCR18_06875 PF00488 MutS domain V JCR18_06875 PF05192 MutS domain III JCR18_06880 PF01037 Lrp/AsnC ligand binding domain JCR18_06885 PF00892 EamA-like transporter family JCR18_06890 PF00990 Diguanylate cyclase, GGDEF domain JCR18_06890 PF03707 Bacterial signalling protein N terminal repeat JCR18_06890 PF00563 EAL domain JCR18_06895 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR18_06905 PF07690 Major Facilitator Superfamily JCR18_06925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR18_06925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR18_06945 PF13419 Haloacid dehalogenase-like hydrolase JCR18_06955 PF04717 Type VI secretion system, phage-baseplate injector JCR18_06955 PF13296 Putative type VI secretion system Rhs element Vgr JCR18_06955 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR18_06960 PF03527 RHS protein JCR18_06960 PF05593 RHS Repeat JCR18_06975 PF03466 LysR substrate binding domain JCR18_06975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_06980 PF01566 Natural resistance-associated macrophage protein JCR18_06985 PF03746 LamB/YcsF family JCR18_06990 PF07286 Protein of unknown function (DUF1445) JCR18_07000 PF00364 Biotin-requiring enzyme JCR18_07000 PF02785 Biotin carboxylase C-terminal domain JCR18_07000 PF00289 Biotin carboxylase, N-terminal domain JCR18_07000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR18_07005 PF00654 Voltage gated chloride channel JCR18_07025 PF00440 Bacterial regulatory proteins, tetR family JCR18_07035 PF00107 Zinc-binding dehydrogenase JCR18_07035 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_07035 PF13823 Alcohol dehydrogenase GroES-associated JCR18_07050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR18_07050 PF00289 Biotin carboxylase, N-terminal domain JCR18_07050 PF02785 Biotin carboxylase C-terminal domain JCR18_07055 PF02525 Flavodoxin-like fold JCR18_07075 PF01402 Ribbon-helix-helix protein, copG family JCR18_07075 PF08753 NikR C terminal nickel binding domain JCR18_07080 PF01425 Amidase JCR18_07085 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR18_07090 PF00005 ABC transporter JCR18_07110 PF09278 MerR, DNA binding JCR18_07110 PF00376 MerR family regulatory protein JCR18_07120 PF00701 Dihydrodipicolinate synthetase family JCR18_07130 PF00392 Bacterial regulatory proteins, gntR family JCR18_07135 PF05544 Proline racemase JCR18_07140 PF01266 FAD dependent oxidoreductase JCR18_07150 PF04324 BFD-like [2Fe-2S] binding domain JCR18_07150 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_07160 PF00083 Sugar (and other) transporter JCR18_07165 PF00171 Aldehyde dehydrogenase family JCR18_07170 PF13520 Amino acid permease JCR18_07175 PF03315 Serine dehydratase beta chain JCR18_07175 PF03313 Serine dehydratase alpha chain JCR18_07180 PF00171 Aldehyde dehydrogenase family JCR18_07180 PF01575 MaoC like domain JCR18_07185 PF05138 Phenylacetic acid catabolic protein JCR18_07190 PF06243 Phenylacetic acid degradation B JCR18_07195 PF05138 Phenylacetic acid catabolic protein JCR18_07200 PF01883 Iron-sulfur cluster assembly protein JCR18_07205 PF00970 Oxidoreductase FAD-binding domain JCR18_07205 PF00175 Oxidoreductase NAD-binding domain JCR18_07205 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_07210 PF00378 Enoyl-CoA hydratase/isomerase JCR18_07215 PF00378 Enoyl-CoA hydratase/isomerase JCR18_07220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR18_07220 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR18_07220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR18_07225 PF02803 Thiolase, C-terminal domain JCR18_07225 PF00108 Thiolase, N-terminal domain JCR18_07230 PF14535 AMP-binding enzyme C-terminal domain JCR18_07230 PF00501 AMP-binding enzyme JCR18_07235 PF07848 PaaX-like protein JCR18_07235 PF08223 PaaX-like protein C-terminal domain JCR18_07240 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_07245 PF03061 Thioesterase superfamily JCR18_07280 PF00199 Catalase JCR18_07285 PF01292 Prokaryotic cytochrome b561 JCR18_07305 PF12697 Alpha/beta hydrolase family JCR18_07310 PF01613 Flavin reductase like domain JCR18_07315 PF00296 Luciferase-like monooxygenase JCR18_07320 PF00171 Aldehyde dehydrogenase family JCR18_07330 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR18_07340 PF00171 Aldehyde dehydrogenase family JCR18_07345 PF02627 Carboxymuconolactone decarboxylase family JCR18_07350 PF03466 LysR substrate binding domain JCR18_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07355 PF02525 Flavodoxin-like fold JCR18_07360 PF09339 IclR helix-turn-helix domain JCR18_07360 PF01614 Bacterial transcriptional regulator JCR18_07365 PF01494 FAD binding domain JCR18_07370 PF07702 UTRA domain JCR18_07370 PF00392 Bacterial regulatory proteins, gntR family JCR18_07380 PF00005 ABC transporter JCR18_07380 PF08402 TOBE domain JCR18_07385 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_07390 PF01266 FAD dependent oxidoreductase JCR18_07395 PF00266 Aminotransferase class-V JCR18_07400 PF13419 Haloacid dehalogenase-like hydrolase JCR18_07405 PF07690 Major Facilitator Superfamily JCR18_07410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_07410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_07410 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_07415 PF02515 CoA-transferase family III JCR18_07420 PF09339 IclR helix-turn-helix domain JCR18_07425 PF00378 Enoyl-CoA hydratase/isomerase JCR18_07430 PF03060 Nitronate monooxygenase JCR18_07435 PF07690 Major Facilitator Superfamily JCR18_07440 PF09339 IclR helix-turn-helix domain JCR18_07445 PF02803 Thiolase, C-terminal domain JCR18_07445 PF00108 Thiolase, N-terminal domain JCR18_07450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR18_07450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR18_07450 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR18_07460 PF00378 Enoyl-CoA hydratase/isomerase JCR18_07465 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_07465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_07465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_07470 PF07690 Major Facilitator Superfamily JCR18_07475 PF01144 Coenzyme A transferase JCR18_07480 PF01144 Coenzyme A transferase JCR18_07490 PF07690 Major Facilitator Superfamily JCR18_07500 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_07500 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR18_07500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_07500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07515 PF03466 LysR substrate binding domain JCR18_07520 PF00682 HMGL-like JCR18_07525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR18_07525 PF18140 Propionyl-coenzyme A carboxylase BT domain JCR18_07525 PF00364 Biotin-requiring enzyme JCR18_07525 PF00289 Biotin carboxylase, N-terminal domain JCR18_07525 PF02785 Biotin carboxylase C-terminal domain JCR18_07530 PF00378 Enoyl-CoA hydratase/isomerase JCR18_07535 PF01039 Carboxyl transferase domain JCR18_07540 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_07540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_07540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_07545 PF00440 Bacterial regulatory proteins, tetR family JCR18_07550 PF00501 AMP-binding enzyme JCR18_07550 PF13193 AMP-binding enzyme C-terminal domain JCR18_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07570 PF03466 LysR substrate binding domain JCR18_07605 PF00994 Probable molybdopterin binding domain JCR18_07605 PF18146 Damage-inducible protein CinA KH domain JCR18_07605 PF02464 Competence-damaged protein JCR18_07615 PF06628 Catalase-related immune-responsive JCR18_07615 PF00199 Catalase JCR18_07615 PF18011 C-terminal domain found in long catalases JCR18_07640 PF00717 Peptidase S24-like JCR18_07650 PF13404 AsnC-type helix-turn-helix domain JCR18_07650 PF01037 Lrp/AsnC ligand binding domain JCR18_07660 PF00072 Response regulator receiver domain JCR18_07660 PF00512 His Kinase A (phospho-acceptor) domain JCR18_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_07660 PF09308 LuxQ, periplasmic JCR18_07665 PF00072 Response regulator receiver domain JCR18_07680 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_07685 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_07690 PF00005 ABC transporter JCR18_07695 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR18_07700 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR18_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07710 PF03466 LysR substrate binding domain JCR18_07715 PF01810 LysE type translocator JCR18_07725 PF00266 Aminotransferase class-V JCR18_07735 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_07740 PF00581 Rhodanese-like domain JCR18_07750 PF03466 LysR substrate binding domain JCR18_07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07755 PF02798 Glutathione S-transferase, N-terminal domain JCR18_07760 PF14834 Glutathione S-transferase, C-terminal domain JCR18_07760 PF02798 Glutathione S-transferase, N-terminal domain JCR18_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07765 PF03466 LysR substrate binding domain JCR18_07770 PF03788 LrgA family JCR18_07775 PF04172 LrgB-like family JCR18_07780 PF00155 Aminotransferase class I and II JCR18_07780 PF00392 Bacterial regulatory proteins, gntR family JCR18_07795 PF07690 Major Facilitator Superfamily JCR18_07800 PF16957 Malonate decarboxylase, alpha subunit, transporter JCR18_07805 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCR18_07810 PF06857 Malonate decarboxylase delta subunit (MdcD) JCR18_07815 PF01039 Carboxyl transferase domain JCR18_07825 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCR18_07830 PF00698 Acyl transferase domain JCR18_07845 PF03466 LysR substrate binding domain JCR18_07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07850 PF00392 Bacterial regulatory proteins, gntR family JCR18_07850 PF00155 Aminotransferase class I and II JCR18_07860 PF02322 Cytochrome bd terminal oxidase subunit II JCR18_07865 PF01654 Cytochrome bd terminal oxidase subunit I JCR18_07875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR18_07875 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_07875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_07880 PF00296 Luciferase-like monooxygenase JCR18_07885 PF00083 Sugar (and other) transporter JCR18_07895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR18_07900 PF00005 ABC transporter JCR18_07905 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_07910 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JCR18_07915 PF01177 Asp/Glu/Hydantoin racemase JCR18_07920 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR18_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07930 PF03466 LysR substrate binding domain JCR18_07940 PF01979 Amidohydrolase family JCR18_07940 PF13382 Adenine deaminase C-terminal domain JCR18_07950 PF03960 ArsC family JCR18_07955 PF01022 Bacterial regulatory protein, arsR family JCR18_07960 PF01758 Sodium Bile acid symporter family JCR18_07965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_07965 PF03466 LysR substrate binding domain JCR18_07980 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_07980 PF13192 Thioredoxin domain JCR18_07995 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_08000 PF00588 SpoU rRNA Methylase family JCR18_08005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCR18_08005 PF14579 Helix-hairpin-helix motif JCR18_08005 PF01336 OB-fold nucleic acid binding domain JCR18_08005 PF02811 PHP domain JCR18_08005 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCR18_08010 PF00710 Asparaginase, N-terminal JCR18_08010 PF17763 Glutaminase/Asparaginase C-terminal domain JCR18_08015 PF00375 Sodium:dicarboxylate symporter family JCR18_08020 PF00155 Aminotransferase class I and II JCR18_08025 PF01641 SelR domain JCR18_08030 PF00255 Glutathione peroxidase JCR18_08035 PF12852 Cupin JCR18_08035 PF12833 Helix-turn-helix domain JCR18_08045 PF00155 Aminotransferase class I and II JCR18_08050 PF01966 HD domain JCR18_08050 PF08335 GlnD PII-uridylyltransferase JCR18_08050 PF01909 Nucleotidyltransferase domain JCR18_08055 PF02222 ATP-grasp domain JCR18_08065 PF05437 Branched-chain amino acid transport protein (AzlD) JCR18_08070 PF03591 AzlC protein JCR18_08095 PF06071 Protein of unknown function (DUF933) JCR18_08095 PF01926 50S ribosome-binding GTPase JCR18_08100 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_08105 PF09383 NIL domain JCR18_08105 PF00005 ABC transporter JCR18_08110 PF03180 NLPA lipoprotein JCR18_08115 PF03180 NLPA lipoprotein JCR18_08120 PF00296 Luciferase-like monooxygenase JCR18_08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_08130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR18_08145 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_08150 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_08155 PF00005 ABC transporter JCR18_08165 PF01037 Lrp/AsnC ligand binding domain JCR18_08175 PF01709 Transcriptional regulator JCR18_08185 PF00440 Bacterial regulatory proteins, tetR family JCR18_08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_08205 PF03466 LysR substrate binding domain JCR18_08215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR18_08225 PF00892 EamA-like transporter family JCR18_08245 PF00577 Outer membrane usher protein JCR18_08245 PF13954 PapC N-terminal domain JCR18_08245 PF13953 PapC C-terminal domain JCR18_08250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR18_08250 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR18_08255 PF16970 Type-1 fimbrial protein, A JCR18_08270 PF04055 Radical SAM superfamily JCR18_08270 PF06968 Biotin and Thiamin Synthesis associated domain JCR18_08275 PF08331 Domain of unknown function (DUF1730) JCR18_08280 PF01256 Carbohydrate kinase JCR18_08280 PF03853 YjeF-related protein N-terminus JCR18_08285 PF02075 Crossover junction endodeoxyribonuclease RuvC JCR18_08300 PF00905 Penicillin binding protein transpeptidase domain JCR18_08320 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCR18_08320 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCR18_08320 PF02772 S-adenosylmethionine synthetase, central domain JCR18_08325 PF02779 Transketolase, pyrimidine binding domain JCR18_08325 PF02780 Transketolase, C-terminal domain JCR18_08325 PF00456 Transketolase, thiamine diphosphate binding domain JCR18_08335 PF04264 YceI-like domain JCR18_08345 PF09992 Phosphodiester glycosidase JCR18_08355 PF05958 tRNA (Uracil-5-)-methyltransferase JCR18_08360 PF04229 GrpB protein JCR18_08365 PF00171 Aldehyde dehydrogenase family JCR18_08365 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JCR18_08365 PF01619 Proline dehydrogenase JCR18_08365 PF14850 DNA-binding domain of Proline dehydrogenase JCR18_08370 PF01037 Lrp/AsnC ligand binding domain JCR18_08375 PF00474 Sodium:solute symporter family JCR18_08380 PF02146 Sir2 family JCR18_08385 PF01597 Glycine cleavage H-protein JCR18_08390 PF12833 Helix-turn-helix domain JCR18_08390 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR18_08400 PF00664 ABC transporter transmembrane region JCR18_08400 PF00005 ABC transporter JCR18_08405 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JCR18_08410 PF06912 Protein of unknown function (DUF1275) JCR18_08415 PF00375 Sodium:dicarboxylate symporter family JCR18_08430 PF08007 Cupin superfamily protein JCR18_08435 PF02545 Maf-like protein JCR18_08445 PF00162 Phosphoglycerate kinase JCR18_08455 PF01116 Fructose-bisphosphate aldolase class-II JCR18_08460 PF00639 PPIC-type PPIASE domain JCR18_08460 PF09312 SurA N-terminal domain JCR18_08465 PF04453 LPS transport system D JCR18_08465 PF03968 OstA-like protein JCR18_08470 PF01636 Phosphotransferase enzyme family JCR18_08475 PF00483 Nucleotidyl transferase JCR18_08480 PF02527 rRNA small subunit methyltransferase G JCR18_08485 PF13614 AAA domain JCR18_08490 PF17762 HTH domain found in ParB protein JCR18_08490 PF02195 ParB-like nuclease domain JCR18_08495 PF01618 MotA/TolQ/ExbB proton channel family JCR18_08505 PF00664 ABC transporter transmembrane region JCR18_08505 PF00005 ABC transporter JCR18_08510 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JCR18_08515 PF02348 Cytidylyltransferase JCR18_08520 PF09115 DNA polymerase III, delta subunit, C terminal JCR18_08530 PF01026 TatD related DNase JCR18_08545 PF07963 Prokaryotic N-terminal methylation motif JCR18_08545 PF02501 Type II secretion system (T2SS), protein I JCR18_08550 PF07963 Prokaryotic N-terminal methylation motif JCR18_08550 PF11612 Type II secretion system (T2SS), protein J JCR18_08555 PF03934 Type II secretion system (T2SS), protein K JCR18_08565 PF03167 Uracil DNA glycosylase superfamily JCR18_08575 PF14437 MafB19-like deaminase JCR18_08585 PF02224 Cytidylate kinase JCR18_08590 PF00575 S1 RNA binding domain JCR18_08595 PF00216 Bacterial DNA-binding protein JCR18_08605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCR18_08615 PF00743 Flavin-binding monooxygenase-like JCR18_08625 PF03969 AFG1-like ATPase JCR18_08630 PF01274 Malate synthase JCR18_08640 PF02472 Biopolymer transport protein ExbD/TolR JCR18_08645 PF02472 Biopolymer transport protein ExbD/TolR JCR18_08650 PF01618 MotA/TolQ/ExbB proton channel family JCR18_08660 PF07715 TonB-dependent Receptor Plug Domain JCR18_08660 PF00593 TonB dependent receptor JCR18_08680 PF01432 Peptidase family M3 JCR18_08685 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_08690 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_08695 PF00005 ABC transporter JCR18_08695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR18_08710 PF00459 Inositol monophosphatase family JCR18_08720 PF01649 Ribosomal protein S20 JCR18_08725 PF13460 NAD(P)H-binding JCR18_08730 PF03737 Aldolase/RraA JCR18_08750 PF02559 CarD-like/TRCF domain JCR18_08750 PF00270 DEAD/DEAH box helicase JCR18_08750 PF17757 UvrB interaction domain JCR18_08750 PF03461 TRCF domain JCR18_08750 PF00271 Helicase conserved C-terminal domain JCR18_08760 PF00211 Adenylate and Guanylate cyclase catalytic domain JCR18_08765 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_08770 PF00012 Hsp70 protein JCR18_08775 PF00226 DnaJ domain JCR18_08775 PF07743 HSCB C-terminal oligomerisation domain JCR18_08780 PF01521 Iron-sulphur cluster biosynthesis JCR18_08785 PF01592 NifU-like N terminal domain JCR18_08790 PF00266 Aminotransferase class-V JCR18_08795 PF02082 Transcriptional regulator JCR18_08810 PF00216 Bacterial DNA-binding protein JCR18_08815 PF09312 SurA N-terminal domain JCR18_08815 PF00639 PPIC-type PPIASE domain JCR18_08820 PF12852 Cupin JCR18_08820 PF12833 Helix-turn-helix domain JCR18_08825 PF00487 Fatty acid desaturase JCR18_08830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_08830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_08830 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_08835 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_08835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_08835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_08840 PF03109 ABC1 family JCR18_08850 PF04073 Aminoacyl-tRNA editing domain JCR18_08855 PF06276 Ferric iron reductase FhuF-like transporter JCR18_08855 PF04183 IucA / IucC family JCR18_08860 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR18_08865 PF07690 Major Facilitator Superfamily JCR18_08870 PF06276 Ferric iron reductase FhuF-like transporter JCR18_08870 PF04183 IucA / IucC family JCR18_08875 PF04183 IucA / IucC family JCR18_08875 PF06276 Ferric iron reductase FhuF-like transporter JCR18_08890 PF07715 TonB-dependent Receptor Plug Domain JCR18_08890 PF00593 TonB dependent receptor JCR18_08915 PF13419 Haloacid dehalogenase-like hydrolase JCR18_08925 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JCR18_08930 PF02277 Phosphoribosyltransferase JCR18_08945 PF02654 Cobalamin-5-phosphate synthase JCR18_08950 PF00793 DAHP synthetase I family JCR18_08975 PF07715 TonB-dependent Receptor Plug Domain JCR18_08975 PF00593 TonB dependent receptor JCR18_08980 PF02684 Lipid-A-disaccharide synthetase JCR18_08990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_08995 PF00005 ABC transporter JCR18_09030 PF01230 HIT domain JCR18_09060 PF08241 Methyltransferase domain JCR18_09065 PF00561 alpha/beta hydrolase fold JCR18_09070 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR18_09080 PF02575 YbaB/EbfC DNA-binding family JCR18_09085 PF13662 Toprim domain JCR18_09085 PF02132 RecR protein JCR18_09090 PF01612 3'-5' exonuclease JCR18_09090 PF00570 HRDC domain JCR18_09110 PF05166 YcgL domain JCR18_09120 PF00004 ATPase family associated with various cellular activities (AAA) JCR18_09120 PF17862 AAA+ lid domain JCR18_09120 PF01434 Peptidase family M41 JCR18_09130 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_09135 PF05175 Methyltransferase small domain JCR18_09140 PF01264 Chorismate synthase JCR18_09145 PF00990 Diguanylate cyclase, GGDEF domain JCR18_09145 PF08448 PAS fold JCR18_09160 PF04055 Radical SAM superfamily JCR18_09165 PF00676 Dehydrogenase E1 component JCR18_09170 PF02779 Transketolase, pyrimidine binding domain JCR18_09170 PF02780 Transketolase, C-terminal domain JCR18_09175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR18_09175 PF02817 e3 binding domain JCR18_09175 PF00364 Biotin-requiring enzyme JCR18_09180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_09180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR18_09185 PF00106 short chain dehydrogenase JCR18_09190 PF00107 Zinc-binding dehydrogenase JCR18_09190 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_09195 PF01062 Bestrophin, RFP-TM, chloride channel JCR18_09200 PF00072 Response regulator receiver domain JCR18_09200 PF00158 Sigma-54 interaction domain JCR18_09200 PF02954 Bacterial regulatory protein, Fis family JCR18_09205 PF00753 Metallo-beta-lactamase superfamily JCR18_09205 PF04273 Putative phosphatase (DUF442) JCR18_09210 PF00753 Metallo-beta-lactamase superfamily JCR18_09210 PF04273 Putative phosphatase (DUF442) JCR18_09215 PF01925 Sulfite exporter TauE/SafE JCR18_09230 PF06445 GyrI-like small molecule binding domain JCR18_09230 PF12833 Helix-turn-helix domain JCR18_09235 PF01638 HxlR-like helix-turn-helix JCR18_09240 PF02525 Flavodoxin-like fold JCR18_09250 PF00392 Bacterial regulatory proteins, gntR family JCR18_09250 PF07702 UTRA domain JCR18_09265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR18_09270 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_09275 PF00005 ABC transporter JCR18_09290 PF00083 Sugar (and other) transporter JCR18_09295 PF07715 TonB-dependent Receptor Plug Domain JCR18_09295 PF00593 TonB dependent receptor JCR18_09300 PF10415 Fumarase C C-terminus JCR18_09300 PF00206 Lyase JCR18_09315 PF03466 LysR substrate binding domain JCR18_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_09320 PF03466 LysR substrate binding domain JCR18_09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_09325 PF02803 Thiolase, C-terminal domain JCR18_09325 PF00108 Thiolase, N-terminal domain JCR18_09330 PF02667 Short chain fatty acid transporter JCR18_09335 PF01144 Coenzyme A transferase JCR18_09340 PF01144 Coenzyme A transferase JCR18_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_09345 PF03466 LysR substrate binding domain JCR18_09370 PF12833 Helix-turn-helix domain JCR18_09370 PF06719 AraC-type transcriptional regulator N-terminus JCR18_09375 PF07690 Major Facilitator Superfamily JCR18_09380 PF01738 Dienelactone hydrolase family JCR18_09395 PF01613 Flavin reductase like domain JCR18_09405 PF12833 Helix-turn-helix domain JCR18_09405 PF14525 AraC-binding-like domain JCR18_09410 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_09410 PF00175 Oxidoreductase NAD-binding domain JCR18_09410 PF00970 Oxidoreductase FAD-binding domain JCR18_09415 PF00866 Ring hydroxylating beta subunit JCR18_09420 PF00355 Rieske [2Fe-2S] domain JCR18_09420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR18_09425 PF03459 TOBE domain JCR18_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_09435 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_09440 PF03459 TOBE domain JCR18_09440 PF00005 ABC transporter JCR18_09445 PF00106 short chain dehydrogenase JCR18_09450 PF00550 Phosphopantetheine attachment site JCR18_09450 PF00857 Isochorismatase family JCR18_09460 PF00149 Calcineurin-like phosphoesterase JCR18_09465 PF02503 Polyphosphate kinase middle domain JCR18_09465 PF13089 Polyphosphate kinase N-terminal domain JCR18_09465 PF13090 Polyphosphate kinase C-terminal domain 2 JCR18_09465 PF17941 Polyphosphate kinase C-terminal domain 1 JCR18_09470 PF08042 PqqA family JCR18_09475 PF12706 Beta-lactamase superfamily domain JCR18_09480 PF03070 TENA/THI-4/PQQC family JCR18_09485 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JCR18_09490 PF04055 Radical SAM superfamily JCR18_09490 PF13186 Iron-sulfur cluster-binding domain JCR18_09495 PF01244 Membrane dipeptidase (Peptidase family M19) JCR18_09510 PF13091 PLD-like domain JCR18_09525 PF00199 Catalase JCR18_09535 PF00107 Zinc-binding dehydrogenase JCR18_09535 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_09545 PF00419 Fimbrial protein JCR18_09550 PF13953 PapC C-terminal domain JCR18_09550 PF00577 Outer membrane usher protein JCR18_09550 PF13954 PapC N-terminal domain JCR18_09555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR18_09555 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR18_09565 PF16970 Type-1 fimbrial protein, A JCR18_09585 PF01266 FAD dependent oxidoreductase JCR18_09600 PF01593 Flavin containing amine oxidoreductase JCR18_09605 PF00743 Flavin-binding monooxygenase-like JCR18_09610 PF12146 Serine aminopeptidase, S33 JCR18_09615 PF02321 Outer membrane efflux protein JCR18_09620 PF00873 AcrB/AcrD/AcrF family JCR18_09625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_09625 PF00529 HlyD membrane-fusion protein of T1SS JCR18_09630 PF00072 Response regulator receiver domain JCR18_09630 PF00486 Transcriptional regulatory protein, C terminal JCR18_09635 PF00672 HAMP domain JCR18_09635 PF16527 Two-component sensor protein CpxA, periplasmic domain JCR18_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_09635 PF00512 His Kinase A (phospho-acceptor) domain JCR18_09645 PF12833 Helix-turn-helix domain JCR18_09645 PF02311 AraC-like ligand binding domain JCR18_09650 PF12146 Serine aminopeptidase, S33 JCR18_09700 PF13291 ACT domain JCR18_09700 PF04607 Region found in RelA / SpoT proteins JCR18_09700 PF02824 TGS domain JCR18_09710 PF13737 Transposase DDE domain JCR18_09715 PF01975 Survival protein SurE JCR18_09740 PF07690 Major Facilitator Superfamily JCR18_09745 PF13533 Biotin-lipoyl like JCR18_09750 PF01425 Amidase JCR18_09755 PF00196 Bacterial regulatory proteins, luxR family JCR18_09825 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR18_09830 PF14572 Phosphoribosyl synthetase-associated domain JCR18_09830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR18_09850 PF00005 ABC transporter JCR18_09855 PF01032 FecCD transport family JCR18_09865 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_09865 PF00107 Zinc-binding dehydrogenase JCR18_09880 PF06719 AraC-type transcriptional regulator N-terminus JCR18_09880 PF12833 Helix-turn-helix domain JCR18_09885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR18_09885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR18_09890 PF07690 Major Facilitator Superfamily JCR18_09895 PF01370 NAD dependent epimerase/dehydratase family JCR18_09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_09900 PF03466 LysR substrate binding domain JCR18_09910 PF00920 Dehydratase family JCR18_09915 PF00171 Aldehyde dehydrogenase family JCR18_09930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_09930 PF00529 HlyD membrane-fusion protein of T1SS JCR18_09950 PF03737 Aldolase/RraA JCR18_09955 PF01842 ACT domain JCR18_09955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR18_09955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR18_09960 PF07690 Major Facilitator Superfamily JCR18_09980 PF03466 LysR substrate binding domain JCR18_09980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_09990 PF08450 SMP-30/Gluconolactonase/LRE-like region JCR18_09995 PF00392 Bacterial regulatory proteins, gntR family JCR18_09995 PF07702 UTRA domain JCR18_10005 PF04909 Amidohydrolase JCR18_10010 PF07690 Major Facilitator Superfamily JCR18_10025 PF05860 haemagglutination activity domain JCR18_10025 PF13332 Hemagglutinin repeat JCR18_10025 PF13018 Extended Signal Peptide of Type V secretion system JCR18_10025 PF04829 Pre-toxin domain with VENN motif JCR18_10030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JCR18_10030 PF17287 POTRA domain JCR18_10030 PF08479 POTRA domain, ShlB-type JCR18_10040 PF01546 Peptidase family M20/M25/M40 JCR18_10040 PF07687 Peptidase dimerisation domain JCR18_10050 PF02254 TrkA-N domain JCR18_10050 PF00999 Sodium/hydrogen exchanger family JCR18_10055 PF07995 Glucose / Sorbosone dehydrogenase JCR18_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_10060 PF03466 LysR substrate binding domain JCR18_10065 PF00857 Isochorismatase family JCR18_10075 PF00440 Bacterial regulatory proteins, tetR family JCR18_10075 PF08359 YsiA-like protein, C-terminal region JCR18_10080 PF12706 Beta-lactamase superfamily domain JCR18_10090 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_10100 PF09278 MerR, DNA binding JCR18_10100 PF00376 MerR family regulatory protein JCR18_10105 PF01872 RibD C-terminal domain JCR18_10110 PF00106 short chain dehydrogenase JCR18_10115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR18_10115 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_10120 PF01047 MarR family JCR18_10125 PF07859 alpha/beta hydrolase fold JCR18_10140 PF06628 Catalase-related immune-responsive JCR18_10140 PF00199 Catalase JCR18_10145 PF00561 alpha/beta hydrolase fold JCR18_10155 PF00171 Aldehyde dehydrogenase family JCR18_10160 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_10160 PF00107 Zinc-binding dehydrogenase JCR18_10165 PF00474 Sodium:solute symporter family JCR18_10170 PF04341 Protein of unknown function, DUF485 JCR18_10175 PF13193 AMP-binding enzyme C-terminal domain JCR18_10175 PF00501 AMP-binding enzyme JCR18_10180 PF00158 Sigma-54 interaction domain JCR18_10180 PF06506 Propionate catabolism activator JCR18_10180 PF02954 Bacterial regulatory protein, Fis family JCR18_10190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_10190 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_10190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_10210 PF00171 Aldehyde dehydrogenase family JCR18_10220 PF07690 Major Facilitator Superfamily JCR18_10225 PF00920 Dehydratase family JCR18_10230 PF07729 FCD domain JCR18_10230 PF00392 Bacterial regulatory proteins, gntR family JCR18_10240 PF03466 LysR substrate binding domain JCR18_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_10245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR18_10245 PF13378 Enolase C-terminal domain-like JCR18_10250 PF02426 Muconolactone delta-isomerase JCR18_10255 PF04444 Catechol dioxygenase N terminus JCR18_10255 PF00775 Dioxygenase JCR18_10260 PF01144 Coenzyme A transferase JCR18_10265 PF01144 Coenzyme A transferase JCR18_10270 PF00108 Thiolase, N-terminal domain JCR18_10270 PF02803 Thiolase, C-terminal domain JCR18_10275 PF12146 Serine aminopeptidase, S33 JCR18_10280 PF01804 Penicillin amidase JCR18_10285 PF00171 Aldehyde dehydrogenase family JCR18_10295 PF01179 Copper amine oxidase, enzyme domain JCR18_10295 PF07833 Copper amine oxidase N-terminal domain JCR18_10295 PF02727 Copper amine oxidase, N2 domain JCR18_10295 PF02728 Copper amine oxidase, N3 domain JCR18_10300 PF12833 Helix-turn-helix domain JCR18_10300 PF02311 AraC-like ligand binding domain JCR18_10305 PF01613 Flavin reductase like domain JCR18_10310 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_10310 PF00175 Oxidoreductase NAD-binding domain JCR18_10325 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR18_10325 PF00355 Rieske [2Fe-2S] domain JCR18_10340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR18_10345 PF01425 Amidase JCR18_10355 PF07690 Major Facilitator Superfamily JCR18_10365 PF00106 short chain dehydrogenase JCR18_10380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_10380 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_10380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_10385 PF03466 LysR substrate binding domain JCR18_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_10390 PF01614 Bacterial transcriptional regulator JCR18_10390 PF09339 IclR helix-turn-helix domain JCR18_10395 PF00753 Metallo-beta-lactamase superfamily JCR18_10405 PF04143 Sulphur transport JCR18_10415 PF13360 PQQ-like domain JCR18_10415 PF01011 PQQ enzyme repeat JCR18_10420 PF04966 Carbohydrate-selective porin, OprB family JCR18_10425 PF05048 Periplasmic copper-binding protein (NosD) JCR18_10430 PF01487 Type I 3-dehydroquinase JCR18_10435 PF00775 Dioxygenase JCR18_10440 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JCR18_10440 PF00775 Dioxygenase JCR18_10445 PF02627 Carboxymuconolactone decarboxylase family JCR18_10450 PF07690 Major Facilitator Superfamily JCR18_10455 PF00561 alpha/beta hydrolase fold JCR18_10460 PF10397 Adenylosuccinate lyase C-terminus JCR18_10460 PF00206 Lyase JCR18_10465 PF02803 Thiolase, C-terminal domain JCR18_10465 PF00108 Thiolase, N-terminal domain JCR18_10470 PF01144 Coenzyme A transferase JCR18_10475 PF01144 Coenzyme A transferase JCR18_10480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JCR18_10485 PF04977 Septum formation initiator JCR18_10490 PF04239 Protein of unknown function (DUF421) JCR18_10495 PF00113 Enolase, C-terminal TIM barrel domain JCR18_10495 PF03952 Enolase, N-terminal domain JCR18_10500 PF00793 DAHP synthetase I family JCR18_10505 PF00117 Glutamine amidotransferase class-I JCR18_10505 PF06418 CTP synthase N-terminus JCR18_10535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR18_10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_10550 PF00793 DAHP synthetase I family JCR18_10555 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JCR18_10560 PF07724 AAA domain (Cdc48 subfamily) JCR18_10560 PF00004 ATPase family associated with various cellular activities (AAA) JCR18_10560 PF17871 AAA lid domain JCR18_10560 PF10431 C-terminal, D2-small domain, of ClpB protein JCR18_10560 PF02861 Clp amino terminal domain, pathogenicity island component JCR18_10565 PF02617 ATP-dependent Clp protease adaptor protein ClpS JCR18_10575 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR18_10575 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR18_10590 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCR18_10595 PF00585 C-terminal regulatory domain of Threonine dehydratase JCR18_10595 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_10600 PF02080 TrkA-C domain JCR18_10600 PF02254 TrkA-N domain JCR18_10605 PF02386 Cation transport protein JCR18_10610 PF02253 Phospholipase A1 JCR18_10615 PF08367 Peptidase M16C associated JCR18_10615 PF05193 Peptidase M16 inactive domain JCR18_10615 PF00675 Insulinase (Peptidase family M16) JCR18_10620 PF00593 TonB dependent receptor JCR18_10620 PF07715 TonB-dependent Receptor Plug Domain JCR18_10625 PF00294 pfkB family carbohydrate kinase JCR18_10635 PF07290 Protein of unknown function (DUF1449) JCR18_10640 PF13737 Transposase DDE domain JCR18_10650 PF01654 Cytochrome bd terminal oxidase subunit I JCR18_10655 PF02322 Cytochrome bd terminal oxidase subunit II JCR18_10660 PF08173 Membrane bound YbgT-like protein JCR18_10675 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JCR18_10685 PF02881 SRP54-type protein, helical bundle domain JCR18_10685 PF00448 SRP54-type protein, GTPase domain JCR18_10710 PF00571 CBS domain JCR18_10710 PF00478 IMP dehydrogenase / GMP reductase domain JCR18_10715 PF00202 Aminotransferase class-III JCR18_10720 PF00462 Glutaredoxin JCR18_10730 PF03466 LysR substrate binding domain JCR18_10730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_10735 PF00557 Metallopeptidase family M24 JCR18_10740 PF05525 Branched-chain amino acid transport protein JCR18_10765 PF05524 PEP-utilising enzyme, N-terminal JCR18_10765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCR18_10765 PF00381 PTS HPr component phosphorylation site JCR18_10765 PF02896 PEP-utilising enzyme, TIM barrel domain JCR18_10765 PF00391 PEP-utilising enzyme, mobile domain JCR18_10770 PF00294 pfkB family carbohydrate kinase JCR18_10775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCR18_10775 PF02378 Phosphotransferase system, EIIC JCR18_10795 PF00563 EAL domain JCR18_10795 PF03707 Bacterial signalling protein N terminal repeat JCR18_10795 PF00990 Diguanylate cyclase, GGDEF domain JCR18_10805 PF07995 Glucose / Sorbosone dehydrogenase JCR18_10810 PF02586 SOS response associated peptidase (SRAP) JCR18_10815 PF00916 Sulfate permease family JCR18_10815 PF01740 STAS domain JCR18_10820 PF00082 Subtilase family JCR18_10820 PF05922 Peptidase inhibitor I9 JCR18_10830 PF00324 Amino acid permease JCR18_10835 PF00266 Aminotransferase class-V JCR18_10840 PF01037 Lrp/AsnC ligand binding domain JCR18_10865 PF13419 Haloacid dehalogenase-like hydrolase JCR18_10870 PF01479 S4 domain JCR18_10875 PF00154 recA bacterial DNA recombination protein JCR18_10880 PF02631 RecX family JCR18_10895 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_10895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JCR18_10900 PF07977 FabA-like domain JCR18_10905 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JCR18_10905 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_10915 PF01103 Surface antigen JCR18_10915 PF07244 Surface antigen variable number repeat JCR18_10920 PF13180 PDZ domain JCR18_10920 PF17820 PDZ domain JCR18_10920 PF02163 Peptidase family M50 JCR18_10925 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JCR18_10925 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JCR18_10925 PF13288 DXP reductoisomerase C-terminal domain JCR18_10935 PF01255 Putative undecaprenyl diphosphate synthase JCR18_10940 PF01765 Ribosome recycling factor JCR18_10945 PF00696 Amino acid kinase family JCR18_10950 PF00919 Uncharacterized protein family UPF0004 JCR18_10950 PF04055 Radical SAM superfamily JCR18_10950 PF18693 TRAM domain JCR18_10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_10955 PF00512 His Kinase A (phospho-acceptor) domain JCR18_10955 PF00989 PAS fold JCR18_10960 PF00158 Sigma-54 interaction domain JCR18_10960 PF02954 Bacterial regulatory protein, Fis family JCR18_10960 PF00072 Response regulator receiver domain JCR18_10970 PF13737 Transposase DDE domain JCR18_10980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR18_10980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR18_10990 PF02542 YgbB family JCR18_11000 PF01266 FAD dependent oxidoreductase JCR18_11020 PF10415 Fumarase C C-terminus JCR18_11020 PF00206 Lyase JCR18_11025 PF16363 GDP-mannose 4,6 dehydratase JCR18_11030 PF02635 DsrE/DsrF-like family JCR18_11050 PF00892 EamA-like transporter family JCR18_11055 PF00392 Bacterial regulatory proteins, gntR family JCR18_11055 PF00155 Aminotransferase class I and II JCR18_11060 PF01638 HxlR-like helix-turn-helix JCR18_11065 PF03453 MoeA N-terminal region (domain I and II) JCR18_11065 PF03454 MoeA C-terminal region (domain IV) JCR18_11065 PF00994 Probable molybdopterin binding domain JCR18_11070 PF01967 MoaC family JCR18_11070 PF00994 Probable molybdopterin binding domain JCR18_11075 PF02391 MoaE protein JCR18_11085 PF06463 Molybdenum Cofactor Synthesis C JCR18_11085 PF04055 Radical SAM superfamily JCR18_11090 PF00384 Molybdopterin oxidoreductase JCR18_11090 PF01568 Molydopterin dinucleotide binding domain JCR18_11090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR18_11095 PF12804 MobA-like NTP transferase domain JCR18_11100 PF01568 Molydopterin dinucleotide binding domain JCR18_11100 PF00384 Molybdopterin oxidoreductase JCR18_11100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR18_11100 PF04324 BFD-like [2Fe-2S] binding domain JCR18_11105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR18_11105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR18_11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_11105 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR18_11105 PF04324 BFD-like [2Fe-2S] binding domain JCR18_11110 PF04324 BFD-like [2Fe-2S] binding domain JCR18_11110 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR18_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_11110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR18_11110 PF13806 Rieske-like [2Fe-2S] domain JCR18_11110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR18_11120 PF00486 Transcriptional regulatory protein, C terminal JCR18_11120 PF00072 Response regulator receiver domain JCR18_11125 PF00005 ABC transporter JCR18_11135 PF11799 impB/mucB/samB family C-terminal domain JCR18_11135 PF00817 impB/mucB/samB family JCR18_11135 PF13438 Domain of unknown function (DUF4113) JCR18_11140 PF01220 Dehydroquinase class II JCR18_11145 PF00364 Biotin-requiring enzyme JCR18_11150 PF02785 Biotin carboxylase C-terminal domain JCR18_11150 PF00289 Biotin carboxylase, N-terminal domain JCR18_11150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR18_11160 PF12832 MFS_1 like family JCR18_11180 PF01645 Conserved region in glutamate synthase JCR18_11195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCR18_11195 PF01565 FAD binding domain JCR18_11200 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR18_11210 PF00465 Iron-containing alcohol dehydrogenase JCR18_11215 PF03061 Thioesterase superfamily JCR18_11220 PF05506 Domain of unknown function (DUF756) JCR18_11220 PF04185 Phosphoesterase family JCR18_11225 PF12170 DNA polymerase III tau subunit V interacting with alpha JCR18_11225 PF12169 DNA polymerase III subunits gamma and tau domain III JCR18_11225 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JCR18_11230 PF07690 Major Facilitator Superfamily JCR18_11240 PF00144 Beta-lactamase JCR18_11245 PF01575 MaoC like domain JCR18_11255 PF02803 Thiolase, C-terminal domain JCR18_11255 PF00108 Thiolase, N-terminal domain JCR18_11265 PF03466 LysR substrate binding domain JCR18_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_11270 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCR18_11275 PF01810 LysE type translocator JCR18_11280 PF01037 Lrp/AsnC ligand binding domain JCR18_11285 PF03594 Benzoate membrane transport protein JCR18_11290 PF02308 MgtC family JCR18_11295 PF00690 Cation transporter/ATPase, N-terminus JCR18_11295 PF00689 Cation transporting ATPase, C-terminus JCR18_11320 PF00582 Universal stress protein family JCR18_11325 PF00005 ABC transporter JCR18_11325 PF12848 ABC transporter JCR18_11345 PF00593 TonB dependent receptor JCR18_11345 PF07715 TonB-dependent Receptor Plug Domain JCR18_11380 PF00924 Mechanosensitive ion channel JCR18_11385 PF07715 TonB-dependent Receptor Plug Domain JCR18_11385 PF00593 TonB dependent receptor JCR18_11390 PF00440 Bacterial regulatory proteins, tetR family JCR18_11400 PF01037 Lrp/AsnC ligand binding domain JCR18_11405 PF01817 Chorismate mutase type II JCR18_11415 PF00106 short chain dehydrogenase JCR18_11425 PF01433 Peptidase family M1 domain JCR18_11425 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JCR18_11425 PF11940 Domain of unknown function (DUF3458) Ig-like fold JCR18_11440 PF02110 Hydroxyethylthiazole kinase family JCR18_11445 PF06445 GyrI-like small molecule binding domain JCR18_11455 PF05970 PIF1-like helicase JCR18_11455 PF14493 Helix-turn-helix domain JCR18_11460 PF00465 Iron-containing alcohol dehydrogenase JCR18_11475 PF00171 Aldehyde dehydrogenase family JCR18_11480 PF13520 Amino acid permease JCR18_11485 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JCR18_11490 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JCR18_11495 PF02540 NAD synthase JCR18_11495 PF00958 GMP synthase C terminal domain JCR18_11495 PF00117 Glutamine amidotransferase class-I JCR18_11500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JCR18_11500 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR18_11505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR18_11510 PF00149 Calcineurin-like phosphoesterase JCR18_11520 PF00881 Nitroreductase family JCR18_11530 PF17209 Hfq protein JCR18_11540 PF01119 DNA mismatch repair protein, C-terminal domain JCR18_11540 PF08676 MutL C terminal dimerisation domain JCR18_11545 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCR18_11550 PF00849 RNA pseudouridylate synthase JCR18_11550 PF01479 S4 domain JCR18_11565 PF00849 RNA pseudouridylate synthase JCR18_11565 PF01479 S4 domain JCR18_11575 PF04284 Protein of unknown function (DUF441) JCR18_11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_11580 PF03466 LysR substrate binding domain JCR18_11595 PF07690 Major Facilitator Superfamily JCR18_11600 PF00520 Ion transport protein JCR18_11600 PF00027 Cyclic nucleotide-binding domain JCR18_11610 PF06434 Aconitate hydratase 2 N-terminus JCR18_11610 PF00330 Aconitase family (aconitate hydratase) JCR18_11610 PF11791 Aconitate B N-terminal domain JCR18_11625 PF17243 POTRA domain TamA domain 1 JCR18_11625 PF01103 Surface antigen JCR18_11625 PF07244 Surface antigen variable number repeat JCR18_11630 PF07690 Major Facilitator Superfamily JCR18_11635 PF03232 Ubiquinone biosynthesis protein COQ7 JCR18_11645 PF00120 Glutamine synthetase, catalytic domain JCR18_11650 PF00486 Transcriptional regulatory protein, C terminal JCR18_11650 PF00072 Response regulator receiver domain JCR18_11655 PF02702 Osmosensitive K+ channel His kinase sensor domain JCR18_11655 PF00512 His Kinase A (phospho-acceptor) domain JCR18_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_11655 PF13493 Domain of unknown function (DUF4118) JCR18_11660 PF02669 K+-transporting ATPase, c chain JCR18_11670 PF03814 Potassium-transporting ATPase A subunit JCR18_11685 PF03109 ABC1 family JCR18_11690 PF00899 ThiF family JCR18_11695 PF01613 Flavin reductase like domain JCR18_11700 PF00501 AMP-binding enzyme JCR18_11700 PF13193 AMP-binding enzyme C-terminal domain JCR18_11705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_11705 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_11705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_11710 PF00106 short chain dehydrogenase JCR18_11715 PF12833 Helix-turn-helix domain JCR18_11720 PF09084 NMT1/THI5 like JCR18_11725 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_11730 PF17827 PrmC N-terminal domain JCR18_11730 PF13847 Methyltransferase domain JCR18_11735 PF00472 RF-1 domain JCR18_11735 PF03462 PCRF domain JCR18_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_11745 PF03466 LysR substrate binding domain JCR18_11760 PF00296 Luciferase-like monooxygenase JCR18_11775 PF00535 Glycosyl transferase family 2 JCR18_11780 PF01522 Polysaccharide deacetylase JCR18_11780 PF14883 Hypothetical glycosyl hydrolase family 13 JCR18_11790 PF03618 Kinase/pyrophosphorylase JCR18_11795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCR18_11795 PF02896 PEP-utilising enzyme, TIM barrel domain JCR18_11795 PF00391 PEP-utilising enzyme, mobile domain JCR18_11805 PF06481 COX Aromatic Rich Motif JCR18_11805 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JCR18_11810 PF00115 Cytochrome C and Quinol oxidase polypeptide I JCR18_11815 PF00510 Cytochrome c oxidase subunit III JCR18_11820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JCR18_11825 PF01040 UbiA prenyltransferase family JCR18_11830 PF01250 Ribosomal protein S6 JCR18_11835 PF01084 Ribosomal protein S18 JCR18_11840 PF01281 Ribosomal protein L9, N-terminal domain JCR18_11840 PF03948 Ribosomal protein L9, C-terminal domain JCR18_11845 PF00772 DnaB-like helicase N terminal domain JCR18_11845 PF03796 DnaB-like helicase C terminal domain JCR18_11850 PF01168 Alanine racemase, N-terminal domain JCR18_11850 PF00842 Alanine racemase, C-terminal domain JCR18_11860 PF08379 Bacterial transglutaminase-like N-terminal region JCR18_11860 PF01841 Transglutaminase-like superfamily JCR18_11870 PF14403 Circularly permuted ATP-grasp type 2 JCR18_11880 PF01134 Glucose inhibited division protein A JCR18_11880 PF13932 GidA associated domain JCR18_11900 PF02954 Bacterial regulatory protein, Fis family JCR18_11905 PF02142 MGS-like domain JCR18_11905 PF01808 AICARFT/IMPCHase bienzyme JCR18_11910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCR18_11910 PF02844 Phosphoribosylglycinamide synthetase, N domain JCR18_11910 PF02843 Phosphoribosylglycinamide synthetase, C domain JCR18_11915 PF03180 NLPA lipoprotein JCR18_11920 PF00005 ABC transporter JCR18_11920 PF09383 NIL domain JCR18_11925 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_11930 PF00753 Metallo-beta-lactamase superfamily JCR18_11930 PF16123 Hydroxyacylglutathione hydrolase C-terminus JCR18_11945 PF13610 DDE domain JCR18_11960 PF13610 DDE domain JCR18_11970 PF13610 DDE domain JCR18_11995 PF13007 Transposase C of IS166 homeodomain JCR18_11995 PF13005 zinc-finger binding domain of transposase IS66 JCR18_11995 PF13817 IS66 C-terminal element JCR18_11995 PF03050 Transposase IS66 family JCR18_12005 PF01636 Phosphotransferase enzyme family JCR18_12010 PF12848 ABC transporter JCR18_12010 PF00005 ABC transporter JCR18_12030 PF07091 Ribosomal RNA methyltransferase (FmrO) JCR18_12045 PF00809 Pterin binding enzyme JCR18_12050 PF00893 Small Multidrug Resistance protein JCR18_12055 PF13427 Domain of unknown function (DUF4111) JCR18_12055 PF01909 Nucleotidyltransferase domain JCR18_12060 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_12075 PF13610 DDE domain JCR18_12085 PF07995 Glucose / Sorbosone dehydrogenase JCR18_12095 PF01177 Asp/Glu/Hydantoin racemase JCR18_12105 PF02470 MlaD protein JCR18_12110 PF04403 Paraquat-inducible protein A JCR18_12120 PF06826 Predicted Permease Membrane Region JCR18_12120 PF02080 TrkA-C domain JCR18_12125 PF00155 Aminotransferase class I and II JCR18_12145 PF00083 Sugar (and other) transporter JCR18_12145 PF08946 Osmosensory transporter coiled coil JCR18_12195 PF07729 FCD domain JCR18_12195 PF00392 Bacterial regulatory proteins, gntR family JCR18_12205 PF03616 Sodium/glutamate symporter JCR18_12210 PF00561 alpha/beta hydrolase fold JCR18_12235 PF04076 Bacterial OB fold (BOF) protein JCR18_12265 PF00324 Amino acid permease JCR18_12270 PF00171 Aldehyde dehydrogenase family JCR18_12275 PF00202 Aminotransferase class-III JCR18_12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_12280 PF03466 LysR substrate binding domain JCR18_12305 PF00069 Protein kinase domain JCR18_12325 PF00814 Glycoprotease family JCR18_12330 PF01165 Ribosomal protein S21 JCR18_12335 PF09424 Yqey-like protein JCR18_12340 PF01435 Peptidase family M48 JCR18_12345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR18_12345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR18_12360 PF00156 Phosphoribosyl transferase domain JCR18_12365 PF02674 Colicin V production protein JCR18_12370 PF01180 Dihydroorotate dehydrogenase JCR18_12390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCR18_12390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCR18_12395 PF00881 Nitroreductase family JCR18_12405 PF00270 DEAD/DEAH box helicase JCR18_12405 PF00271 Helicase conserved C-terminal domain JCR18_12410 PF00313 'Cold-shock' DNA-binding domain JCR18_12420 PF04542 Sigma-70 region 2 JCR18_12420 PF00140 Sigma-70 factor, region 1.2 JCR18_12420 PF04545 Sigma-70, region 4 JCR18_12425 PF04241 Protein of unknown function (DUF423) JCR18_12435 PF05690 Thiazole biosynthesis protein ThiG JCR18_12445 PF03883 Peroxide stress protein YaaA JCR18_12455 PF12706 Beta-lactamase superfamily domain JCR18_12460 PF01546 Peptidase family M20/M25/M40 JCR18_12460 PF07687 Peptidase dimerisation domain JCR18_12470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR18_12475 PF01842 ACT domain JCR18_12475 PF00800 Prephenate dehydratase JCR18_12475 PF01817 Chorismate mutase type II JCR18_12480 PF00756 Putative esterase JCR18_12485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_12485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_12485 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_12490 PF00375 Sodium:dicarboxylate symporter family JCR18_12495 PF02885 Glycosyl transferase family, helical bundle domain JCR18_12495 PF00591 Glycosyl transferase family, a/b domain JCR18_12500 PF07023 Protein of unknown function (DUF1315) JCR18_12505 PF01513 ATP-NAD kinase JCR18_12510 PF14814 Bifunctional transglycosylase second domain JCR18_12510 PF00905 Penicillin binding protein transpeptidase domain JCR18_12510 PF00912 Transglycosylase JCR18_12520 PF00293 NUDIX domain JCR18_12530 PF08521 Two-component sensor kinase N-terminal JCR18_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_12530 PF00512 His Kinase A (phospho-acceptor) domain JCR18_12535 PF00486 Transcriptional regulatory protein, C terminal JCR18_12535 PF00072 Response regulator receiver domain JCR18_12545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR18_12545 PF00437 Type II/IV secretion system protein JCR18_12555 PF01980 tRNA-methyltransferase O JCR18_12555 PF18389 TrmO C-terminal domain JCR18_12560 PF00175 Oxidoreductase NAD-binding domain JCR18_12560 PF00970 Oxidoreductase FAD-binding domain JCR18_12565 PF02567 Phenazine biosynthesis-like protein JCR18_12570 PF00155 Aminotransferase class I and II JCR18_12570 PF00392 Bacterial regulatory proteins, gntR family JCR18_12575 PF01136 Peptidase family U32 JCR18_12575 PF16325 Peptidase family U32 C-terminal domain JCR18_12580 PF00037 4Fe-4S binding domain JCR18_12585 PF00893 Small Multidrug Resistance protein JCR18_12590 PF00005 ABC transporter JCR18_12595 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_12600 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_12605 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR18_12610 PF03466 LysR substrate binding domain JCR18_12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_12615 PF13533 Biotin-lipoyl like JCR18_12620 PF00873 AcrB/AcrD/AcrF family JCR18_12625 PF02321 Outer membrane efflux protein JCR18_12630 PF00464 Serine hydroxymethyltransferase JCR18_12660 PF00005 ABC transporter JCR18_12665 PF01061 ABC-2 type transporter JCR18_12670 PF14489 QueF-like protein JCR18_12670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JCR18_12680 PF01098 Cell cycle protein JCR18_12685 PF13406 Transglycosylase SLT domain JCR18_12690 PF03330 Lytic transglycolase JCR18_12690 PF05036 Sporulation related domain JCR18_12710 PF12833 Helix-turn-helix domain JCR18_12720 PF00889 Elongation factor TS JCR18_12725 PF00318 Ribosomal protein S2 JCR18_12730 PF00557 Metallopeptidase family M24 JCR18_12740 PF07690 Major Facilitator Superfamily JCR18_12750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR18_12750 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_12755 PF04055 Radical SAM superfamily JCR18_12760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_12760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_12760 PF09317 Domain of unknown function (DUF1974) JCR18_12775 PF05221 S-adenosyl-L-homocysteine hydrolase JCR18_12775 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JCR18_12780 PF02219 Methylenetetrahydrofolate reductase JCR18_12785 PF04452 RNA methyltransferase JCR18_12790 PF00563 EAL domain JCR18_12790 PF00990 Diguanylate cyclase, GGDEF domain JCR18_12790 PF03707 Bacterial signalling protein N terminal repeat JCR18_12795 PF03949 Malic enzyme, NAD binding domain JCR18_12795 PF01515 Phosphate acetyl/butaryl transferase JCR18_12795 PF00390 Malic enzyme, N-terminal domain JCR18_12800 PF01743 Poly A polymerase head domain JCR18_12800 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR18_12805 PF13180 PDZ domain JCR18_12810 PF01784 NIF3 (NGG1p interacting factor 3) JCR18_12815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCR18_12815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCR18_12850 PF01040 UbiA prenyltransferase family JCR18_12855 PF04345 Chorismate lyase JCR18_12860 PF03951 Glutamine synthetase, beta-Grasp domain JCR18_12860 PF00120 Glutamine synthetase, catalytic domain JCR18_12865 PF00854 POT family JCR18_12875 PF13356 Arm DNA-binding domain JCR18_12875 PF00589 Phage integrase family JCR18_12930 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JCR18_13145 PF02384 N-6 DNA Methylase JCR18_13145 PF12161 HsdM N-terminal domain JCR18_13490 PF01555 DNA methylase JCR18_13520 PF01555 DNA methylase JCR18_13610 PF00117 Glutamine amidotransferase class-I JCR18_13615 PF01433 Peptidase family M1 domain JCR18_13615 PF11838 ERAP1-like C-terminal domain JCR18_13620 PF00593 TonB dependent receptor JCR18_13620 PF07715 TonB-dependent Receptor Plug Domain JCR18_13625 PF00591 Glycosyl transferase family, a/b domain JCR18_13625 PF02885 Glycosyl transferase family, helical bundle domain JCR18_13630 PF00218 Indole-3-glycerol phosphate synthase JCR18_13645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JCR18_13645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JCR18_13650 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_13650 PF01799 [2Fe-2S] binding domain JCR18_13655 PF01227 GTP cyclohydrolase I JCR18_13665 PF00144 Beta-lactamase JCR18_13680 PF05675 Protein of unknown function (DUF817) JCR18_13685 PF01208 Uroporphyrinogen decarboxylase (URO-D) JCR18_13695 PF00425 chorismate binding enzyme JCR18_13720 PF00005 ABC transporter JCR18_13725 PF00005 ABC transporter JCR18_13735 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR18_13740 PF00857 Isochorismatase family JCR18_13740 PF00550 Phosphopantetheine attachment site JCR18_13745 PF13193 AMP-binding enzyme C-terminal domain JCR18_13745 PF00501 AMP-binding enzyme JCR18_13750 PF00550 Phosphopantetheine attachment site JCR18_13750 PF00501 AMP-binding enzyme JCR18_13750 PF00668 Condensation domain JCR18_13755 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR18_13760 PF00593 TonB dependent receptor JCR18_13760 PF07715 TonB-dependent Receptor Plug Domain JCR18_13765 PF01497 Periplasmic binding protein JCR18_13770 PF00005 ABC transporter JCR18_13775 PF01032 FecCD transport family JCR18_13780 PF01032 FecCD transport family JCR18_13785 PF00501 AMP-binding enzyme JCR18_13785 PF00975 Thioesterase domain JCR18_13785 PF00668 Condensation domain JCR18_13785 PF00550 Phosphopantetheine attachment site JCR18_13785 PF13193 AMP-binding enzyme C-terminal domain JCR18_13790 PF00668 Condensation domain JCR18_13790 PF00550 Phosphopantetheine attachment site JCR18_13790 PF13193 AMP-binding enzyme C-terminal domain JCR18_13790 PF00501 AMP-binding enzyme JCR18_13800 PF13309 HTH domain JCR18_13800 PF08348 YheO-like PAS domain JCR18_13810 PF17954 Quercetinase C-terminal cupin domain JCR18_13810 PF02678 Pirin JCR18_13830 PF00440 Bacterial regulatory proteins, tetR family JCR18_13835 PF08990 Erythronolide synthase docking JCR18_13835 PF08659 KR domain JCR18_13835 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_13835 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_13835 PF16197 Ketoacyl-synthetase C-terminal extension JCR18_13835 PF09277 Erythronolide synthase, docking JCR18_13835 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_13835 PF00698 Acyl transferase domain JCR18_13835 PF00550 Phosphopantetheine attachment site JCR18_13835 PF14765 Polyketide synthase dehydratase JCR18_13840 PF13378 Enolase C-terminal domain-like JCR18_13840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR18_13845 PF00083 Sugar (and other) transporter JCR18_13850 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JCR18_13860 PF00892 EamA-like transporter family JCR18_13880 PF01266 FAD dependent oxidoreductase JCR18_13880 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR18_13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_13885 PF18113 Rubredoxin binding C-terminal domain JCR18_13890 PF00171 Aldehyde dehydrogenase family JCR18_13895 PF00355 Rieske [2Fe-2S] domain JCR18_13895 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR18_13900 PF02028 BCCT, betaine/carnitine/choline family transporter JCR18_13905 PF02028 BCCT, betaine/carnitine/choline family transporter JCR18_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_13910 PF03466 LysR substrate binding domain JCR18_13915 PF00324 Amino acid permease JCR18_13920 PF00171 Aldehyde dehydrogenase family JCR18_13935 PF13556 PucR C-terminal helix-turn-helix domain JCR18_13935 PF17853 GGDEF-like domain JCR18_13935 PF06018 CodY GAF-like domain JCR18_13965 PF04328 Selenoprotein, putative JCR18_13970 PF02554 Carbon starvation protein CstA JCR18_13970 PF13722 5TM C-terminal transporter carbon starvation CstA JCR18_13975 PF09285 Elongation factor P, C-terminal JCR18_13975 PF08207 Elongation factor P (EF-P) KOW-like domain JCR18_13975 PF01132 Elongation factor P (EF-P) OB domain JCR18_13980 PF04055 Radical SAM superfamily JCR18_13995 PF01197 Ribosomal protein L31 JCR18_14000 PF13593 SBF-like CPA transporter family (DUF4137) JCR18_14005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR18_14010 PF07690 Major Facilitator Superfamily JCR18_14015 PF13654 AAA domain JCR18_14015 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR18_14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_14020 PF03466 LysR substrate binding domain JCR18_14025 PF01476 LysM domain JCR18_14025 PF01551 Peptidase family M23 JCR18_14030 PF01975 Survival protein SurE JCR18_14045 PF00768 D-alanyl-D-alanine carboxypeptidase JCR18_14045 PF07943 Penicillin-binding protein 5, C-terminal domain JCR18_14050 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_14055 PF13344 Haloacid dehalogenase-like hydrolase JCR18_14055 PF00293 NUDIX domain JCR18_14065 PF04356 Protein of unknown function (DUF489) JCR18_14070 PF08328 Adenylosuccinate lyase C-terminal JCR18_14070 PF00206 Lyase JCR18_14085 PF08496 Peptidase family S49 N-terminal JCR18_14085 PF01343 Peptidase family S49 JCR18_14090 PF00005 ABC transporter JCR18_14095 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_14100 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_14105 PF12849 PBP superfamily domain JCR18_14110 PF00324 Amino acid permease JCR18_14115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR18_14115 PF00205 Thiamine pyrophosphate enzyme, central domain JCR18_14115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR18_14120 PF01037 Lrp/AsnC ligand binding domain JCR18_14125 PF00171 Aldehyde dehydrogenase family JCR18_14130 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR18_14135 PF00202 Aminotransferase class-III JCR18_14145 PF17754 MftR C-terminal domain JCR18_14145 PF00440 Bacterial regulatory proteins, tetR family JCR18_14155 PF00487 Fatty acid desaturase JCR18_14160 PF00970 Oxidoreductase FAD-binding domain JCR18_14160 PF00175 Oxidoreductase NAD-binding domain JCR18_14160 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR18_14165 PF00440 Bacterial regulatory proteins, tetR family JCR18_14175 PF00271 Helicase conserved C-terminal domain JCR18_14175 PF18337 RapA N-terminal Tudor like domain JCR18_14175 PF18339 RapA N-terminal Tudor like domain 1 JCR18_14175 PF12137 RNA polymerase recycling family C-terminal JCR18_14175 PF00176 SNF2 family N-terminal domain JCR18_14180 PF00849 RNA pseudouridylate synthase JCR18_14190 PF00202 Aminotransferase class-III JCR18_14195 PF02581 Thiamine monophosphate synthase JCR18_14220 PF05193 Peptidase M16 inactive domain JCR18_14220 PF00675 Insulinase (Peptidase family M16) JCR18_14225 PF02567 Phenazine biosynthesis-like protein JCR18_14230 PF00375 Sodium:dicarboxylate symporter family JCR18_14235 PF03466 LysR substrate binding domain JCR18_14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_14240 PF06779 Uncharacterised MFS-type transporter YbfB JCR18_14260 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR18_14265 PF00849 RNA pseudouridylate synthase JCR18_14270 PF03971 Monomeric isocitrate dehydrogenase JCR18_14280 PF00768 D-alanyl-D-alanine carboxypeptidase JCR18_14280 PF07943 Penicillin-binding protein 5, C-terminal domain JCR18_14285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_14290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR18_14295 PF00875 DNA photolyase JCR18_14295 PF03441 FAD binding domain of DNA photolyase JCR18_14325 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR18_14340 PF03060 Nitronate monooxygenase JCR18_14345 PF01207 Dihydrouridine synthase (Dus) JCR18_14350 PF07759 Protein of unknown function (DUF1615) JCR18_14360 PF00696 Amino acid kinase family JCR18_14360 PF01472 PUA domain JCR18_14365 PF01926 50S ribosome-binding GTPase JCR18_14365 PF01018 GTP1/OBG JCR18_14380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR18_14380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR18_14385 PF00892 EamA-like transporter family JCR18_14395 PF04851 Type III restriction enzyme, res subunit JCR18_14395 PF17757 UvrB interaction domain JCR18_14395 PF00271 Helicase conserved C-terminal domain JCR18_14395 PF02151 UvrB/uvrC motif JCR18_14395 PF12344 Ultra-violet resistance protein B JCR18_14405 PF17151 Periplasmic sensor domain JCR18_14405 PF00990 Diguanylate cyclase, GGDEF domain JCR18_14415 PF00155 Aminotransferase class I and II JCR18_14450 PF00106 short chain dehydrogenase JCR18_14455 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JCR18_14460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JCR18_14465 PF11967 Recombination protein O N terminal JCR18_14465 PF02565 Recombination protein O C terminal JCR18_14475 PF07650 KH domain JCR18_14475 PF01926 50S ribosome-binding GTPase JCR18_14480 PF14622 Ribonuclease-III-like JCR18_14480 PF00035 Double-stranded RNA binding motif JCR18_14490 PF10502 Signal peptidase, peptidase S26 JCR18_14495 PF00009 Elongation factor Tu GTP binding domain JCR18_14495 PF06421 GTP-binding protein LepA C-terminus JCR18_14495 PF03144 Elongation factor Tu domain 2 JCR18_14495 PF00679 Elongation factor G C-terminus JCR18_14505 PF13180 PDZ domain JCR18_14510 PF02910 Fumarate reductase flavoprotein C-term JCR18_14510 PF00890 FAD binding domain JCR18_14520 PF02223 Thymidylate kinase JCR18_14525 PF02618 YceG-like family JCR18_14530 PF01063 Amino-transferase class IV JCR18_14545 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_14550 PF00528 Binding-protein-dependent transport system inner membrane component JCR18_14555 PF00005 ABC transporter JCR18_14555 PF12857 TOBE-like domain JCR18_14560 PF03466 LysR substrate binding domain JCR18_14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_14570 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_14570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JCR18_14570 PF14602 Hexapeptide repeat of succinyl-transferase JCR18_14580 PF06508 Queuosine biosynthesis protein QueC JCR18_14595 PF00578 AhpC/TSA family JCR18_14605 PF01467 Cytidylyltransferase-like JCR18_14605 PF00293 NUDIX domain JCR18_14610 PF00378 Enoyl-CoA hydratase/isomerase JCR18_14615 PF01784 NIF3 (NGG1p interacting factor 3) JCR18_14620 PF07690 Major Facilitator Superfamily JCR18_14625 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JCR18_14625 PF02769 AIR synthase related protein, C-terminal domain JCR18_14625 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCR18_14630 PF01966 HD domain JCR18_14635 PF07499 RuvA, C-terminal domain JCR18_14635 PF01330 RuvA N terminal domain JCR18_14640 PF17864 RuvB AAA lid domain JCR18_14640 PF05491 RuvB C-terminal winged helix domain JCR18_14640 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCR18_14645 PF01546 Peptidase family M20/M25/M40 JCR18_14645 PF07687 Peptidase dimerisation domain JCR18_14650 PF03061 Thioesterase superfamily JCR18_14655 PF01618 MotA/TolQ/ExbB proton channel family JCR18_14660 PF02472 Biopolymer transport protein ExbD/TolR JCR18_14670 PF04052 TolB amino-terminal domain JCR18_14670 PF07676 WD40-like Beta Propeller Repeat JCR18_14675 PF00691 OmpA family JCR18_14685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JCR18_14690 PF00588 SpoU rRNA Methylase family JCR18_14690 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR18_14725 PF11638 DnaA N-terminal domain JCR18_14725 PF00308 Bacterial dnaA protein JCR18_14725 PF08299 Bacterial dnaA protein helix-turn-helix JCR18_14730 PF01594 AI-2E family transporter JCR18_14735 PF02769 AIR synthase related protein, C-terminal domain JCR18_14735 PF00586 AIR synthase related protein, N-terminal domain JCR18_14740 PF00551 Formyl transferase JCR18_14745 PF12697 Alpha/beta hydrolase family JCR18_14750 PF01343 Peptidase family S49 JCR18_14750 PF06965 Na+/H+ antiporter 1 JCR18_14760 PF00753 Metallo-beta-lactamase superfamily JCR18_14760 PF03772 Competence protein JCR18_14760 PF13567 Domain of unknown function (DUF4131) JCR18_14765 PF00005 ABC transporter JCR18_14770 PF02687 FtsX-like permease family JCR18_14770 PF12704 MacB-like periplasmic core domain JCR18_14780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCR18_14795 PF00266 Aminotransferase class-V JCR18_14805 PF13533 Biotin-lipoyl like JCR18_14825 PF00535 Glycosyl transferase family 2 JCR18_14840 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR18_14840 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR18_14845 PF00766 Electron transfer flavoprotein FAD-binding domain JCR18_14845 PF01012 Electron transfer flavoprotein domain JCR18_14850 PF01012 Electron transfer flavoprotein domain JCR18_14855 PF02899 Phage integrase, N-terminal SAM-like domain JCR18_14855 PF00589 Phage integrase family JCR18_14860 PF01810 LysE type translocator JCR18_14865 PF01678 Diaminopimelate epimerase JCR18_14870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCR18_14870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCR18_14880 PF00324 Amino acid permease JCR18_14885 PF18073 Rubredoxin metal binding domain JCR18_14895 PF00152 tRNA synthetases class II (D, K and N) JCR18_14900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR18_14900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR18_14900 PF11890 Domain of unknown function (DUF3410) JCR18_14905 PF06803 Protein of unknown function (DUF1232) JCR18_14910 PF02634 FdhD/NarQ family JCR18_14915 PF00384 Molybdopterin oxidoreductase JCR18_14920 PF02595 Glycerate kinase family JCR18_14935 PF00881 Nitroreductase family JCR18_15030 PF10124 Mu-like prophage major head subunit gpT JCR18_15045 PF05069 Phage virion morphogenesis family JCR18_15050 PF04233 Phage Mu protein F like protein JCR18_15055 PF06074 Protein of unknown function (DUF935) JCR18_15070 PF03237 Terminase-like family JCR18_15105 PF10502 Signal peptidase, peptidase S26 JCR18_15135 PF01471 Putative peptidoglycan binding domain JCR18_15135 PF13401 AAA domain JCR18_15160 PF00216 Bacterial DNA-binding protein JCR18_15210 PF00501 AMP-binding enzyme JCR18_15210 PF00975 Thioesterase domain JCR18_15210 PF00668 Condensation domain JCR18_15210 PF00550 Phosphopantetheine attachment site JCR18_15210 PF13193 AMP-binding enzyme C-terminal domain JCR18_15225 PF03449 Transcription elongation factor, N-terminal JCR18_15225 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR18_15230 PF01464 Transglycosylase SLT domain JCR18_15230 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR18_15240 PF01171 PP-loop family JCR18_15245 PF01464 Transglycosylase SLT domain JCR18_15250 PF01435 Peptidase family M48 JCR18_15260 PF00873 AcrB/AcrD/AcrF family JCR18_15265 PF03009 Glycerophosphoryl diester phosphodiesterase family JCR18_15275 PF01219 Prokaryotic diacylglycerol kinase JCR18_15280 PF00118 TCP-1/cpn60 chaperonin family JCR18_15285 PF00166 Chaperonin 10 Kd subunit JCR18_15295 PF00149 Calcineurin-like phosphoesterase JCR18_15300 PF00781 Diacylglycerol kinase catalytic domain JCR18_15305 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JCR18_15305 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JCR18_15310 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCR18_15310 PF01266 FAD dependent oxidoreductase JCR18_15315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCR18_15315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCR18_15320 PF00083 Sugar (and other) transporter JCR18_15335 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCR18_15335 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCR18_15350 PF09423 PhoD-like phosphatase JCR18_15350 PF16655 PhoD-like phosphatase, N-terminal domain JCR18_15370 PF00809 Pterin binding enzyme JCR18_15375 PF00004 ATPase family associated with various cellular activities (AAA) JCR18_15375 PF06480 FtsH Extracellular JCR18_15375 PF17862 AAA+ lid domain JCR18_15375 PF01434 Peptidase family M41 JCR18_15380 PF01728 FtsJ-like methyltransferase JCR18_15385 PF01985 CRS1 / YhbY (CRM) domain JCR18_15400 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCR18_15400 PF00117 Glutamine amidotransferase class-I JCR18_15405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR18_15405 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCR18_15405 PF02142 MGS-like domain JCR18_15410 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR18_15410 PF03449 Transcription elongation factor, N-terminal JCR18_15415 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_15420 PF00582 Universal stress protein family JCR18_15425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR18_15435 PF09587 Bacterial capsule synthesis protein PGA_cap JCR18_15465 PF00999 Sodium/hydrogen exchanger family JCR18_15470 PF04228 Putative neutral zinc metallopeptidase JCR18_15475 PF05661 Protein of unknown function (DUF808) JCR18_15480 PF00579 tRNA synthetases class I (W and Y) JCR18_15485 PF00549 CoA-ligase JCR18_15485 PF02629 CoA binding domain JCR18_15490 PF00549 CoA-ligase JCR18_15490 PF08442 ATP-grasp domain JCR18_15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_15495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR18_15500 PF00364 Biotin-requiring enzyme JCR18_15500 PF02817 e3 binding domain JCR18_15500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR18_15505 PF16078 2-oxoglutarate dehydrogenase N-terminus JCR18_15505 PF00676 Dehydrogenase E1 component JCR18_15505 PF16870 2-oxoglutarate dehydrogenase C-terminal JCR18_15505 PF02779 Transketolase, pyrimidine binding domain JCR18_15520 PF13085 2Fe-2S iron-sulfur cluster binding domain JCR18_15525 PF00890 FAD binding domain JCR18_15525 PF02910 Fumarate reductase flavoprotein C-term JCR18_15530 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR18_15535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR18_15540 PF00285 Citrate synthase, C-terminal domain JCR18_15550 PF17773 UPF0176 acylphosphatase like domain JCR18_15550 PF00581 Rhodanese-like domain JCR18_15570 PF00140 Sigma-70 factor, region 1.2 JCR18_15570 PF04542 Sigma-70 region 2 JCR18_15570 PF04539 Sigma-70 region 3 JCR18_15570 PF03979 Sigma-70 factor, region 1.1 JCR18_15570 PF04545 Sigma-70, region 4 JCR18_15570 PF04546 Sigma-70, non-essential region JCR18_15575 PF04359 Protein of unknown function (DUF493) JCR18_15580 PF03099 Biotin/lipoate A/B protein ligase family JCR18_15590 PF00465 Iron-containing alcohol dehydrogenase JCR18_15595 PF13520 Amino acid permease JCR18_15600 PF03358 NADPH-dependent FMN reductase JCR18_15605 PF01638 HxlR-like helix-turn-helix JCR18_15610 PF00588 SpoU rRNA Methylase family JCR18_15615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR18_15615 PF14824 Sirohaem biosynthesis protein central JCR18_15615 PF10414 Sirohaem synthase dimerisation region JCR18_15620 PF02403 Seryl-tRNA synthetase N-terminal domain JCR18_15620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR18_15630 PF03548 Outer membrane lipoprotein carrier protein LolA JCR18_15635 PF01016 Ribosomal L27 protein JCR18_15640 PF00829 Ribosomal prokaryotic L21 protein JCR18_15650 PF00348 Polyprenyl synthetase JCR18_15660 PF01569 PAP2 superfamily JCR18_15665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_15665 PF00529 HlyD membrane-fusion protein of T1SS JCR18_15670 PF00873 AcrB/AcrD/AcrF family JCR18_15675 PF02321 Outer membrane efflux protein JCR18_15680 PF01906 Putative heavy-metal-binding JCR18_15685 PF01906 Putative heavy-metal-binding JCR18_15705 PF00133 tRNA synthetases class I (I, L, M and V) JCR18_15705 PF10458 Valyl tRNA synthetase tRNA binding arm JCR18_15705 PF08264 Anticodon-binding domain of tRNA JCR18_15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_15725 PF03466 LysR substrate binding domain JCR18_15730 PF00909 Ammonium Transporter Family JCR18_15740 PF08521 Two-component sensor kinase N-terminal JCR18_15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_15740 PF00512 His Kinase A (phospho-acceptor) domain JCR18_15745 PF00486 Transcriptional regulatory protein, C terminal JCR18_15745 PF00072 Response regulator receiver domain JCR18_15750 PF08019 Phosphoethanolamine transferase EptA/EptB JCR18_15750 PF00884 Sulfatase JCR18_15770 PF01734 Patatin-like phospholipase JCR18_15780 PF01145 SPFH domain / Band 7 family JCR18_15785 PF04237 YjbR JCR18_15790 PF00348 Polyprenyl synthetase JCR18_15795 PF04303 PrpF protein JCR18_15800 PF00324 Amino acid permease JCR18_15810 PF01965 DJ-1/PfpI family JCR18_15815 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR18_15815 PF08990 Erythronolide synthase docking JCR18_15815 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_15815 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR18_15815 PF08659 KR domain JCR18_15815 PF00550 Phosphopantetheine attachment site JCR18_15815 PF00698 Acyl transferase domain JCR18_15815 PF16197 Ketoacyl-synthetase C-terminal extension JCR18_15815 PF09277 Erythronolide synthase, docking JCR18_15815 PF14765 Polyketide synthase dehydratase JCR18_15820 PF06719 AraC-type transcriptional regulator N-terminus JCR18_15820 PF12833 Helix-turn-helix domain JCR18_15825 PF02673 Bacitracin resistance protein BacA JCR18_15845 PF02525 Flavodoxin-like fold JCR18_15860 PF01507 Phosphoadenosine phosphosulfate reductase family JCR18_15865 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JCR18_15865 PF06974 Protein of unknown function (DUF1298) JCR18_15875 PF10150 Ribonuclease E/G family JCR18_15875 PF00575 S1 RNA binding domain JCR18_15880 PF02545 Maf-like protein JCR18_15885 PF04093 rod shape-determining protein MreD JCR18_15890 PF04085 rod shape-determining protein MreC JCR18_15900 PF02686 Glu-tRNAGln amidotransferase C subunit JCR18_15905 PF01425 Amidase JCR18_15910 PF02934 GatB/GatE catalytic domain JCR18_15910 PF02637 GatB domain JCR18_15940 PF05992 SbmA/BacA-like family JCR18_15945 PF13291 ACT domain JCR18_15945 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_15950 PF01734 Patatin-like phospholipase JCR18_15955 PF01235 Sodium:alanine symporter family JCR18_15970 PF00881 Nitroreductase family JCR18_15975 PF07690 Major Facilitator Superfamily JCR18_15980 PF12805 FUSC-like inner membrane protein yccS JCR18_15990 PF00667 FAD binding domain JCR18_15990 PF00175 Oxidoreductase NAD-binding domain JCR18_15990 PF00258 Flavodoxin JCR18_16030 PF03734 L,D-transpeptidase catalytic domain JCR18_16030 PF17969 L,D-transpeptidase C-terminal domain JCR18_16035 PF04304 Protein of unknown function (DUF454) JCR18_16045 PF08085 Entericidin EcnA/B family JCR18_16050 PF07687 Peptidase dimerisation domain JCR18_16050 PF01546 Peptidase family M20/M25/M40 JCR18_16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_16060 PF01627 Hpt domain JCR18_16060 PF00072 Response regulator receiver domain JCR18_16060 PF01584 CheW-like domain JCR18_16065 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JCR18_16065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCR18_16070 PF01584 CheW-like domain JCR18_16075 PF00072 Response regulator receiver domain JCR18_16080 PF00072 Response regulator receiver domain JCR18_16095 PF00873 AcrB/AcrD/AcrF family JCR18_16100 PF04073 Aminoacyl-tRNA editing domain JCR18_16100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR18_16100 PF03129 Anticodon binding domain JCR18_16105 PF07411 Domain of unknown function (DUF1508) JCR18_16110 PF03831 PhnA domain JCR18_16110 PF08274 PhnA Zinc-Ribbon JCR18_16115 PF04343 Protein of unknown function, DUF488 JCR18_16125 PF01571 Aminomethyltransferase folate-binding domain JCR18_16130 PF10411 Disulfide bond isomerase protein N-terminus JCR18_16130 PF13098 Thioredoxin-like domain JCR18_16145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR18_16160 PF07715 TonB-dependent Receptor Plug Domain JCR18_16160 PF00593 TonB dependent receptor JCR18_16165 PF02245 Methylpurine-DNA glycosylase (MPG) JCR18_16170 PF06827 Zinc finger found in FPG and IleRS JCR18_16170 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCR18_16170 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCR18_16185 PF01741 Large-conductance mechanosensitive channel, MscL JCR18_16190 PF00679 Elongation factor G C-terminus JCR18_16190 PF00009 Elongation factor Tu GTP binding domain JCR18_16190 PF03144 Elongation factor Tu domain 2 JCR18_16195 PF00860 Permease family JCR18_16200 PF08468 Methyltransferase small domain N-terminal JCR18_16200 PF05175 Methyltransferase small domain JCR18_16205 PF00324 Amino acid permease JCR18_16210 PF01139 tRNA-splicing ligase RtcB JCR18_16220 PF00691 OmpA family JCR18_16220 PF13505 Outer membrane protein beta-barrel domain JCR18_16230 PF02803 Thiolase, C-terminal domain JCR18_16230 PF00108 Thiolase, N-terminal domain JCR18_16240 PF00893 Small Multidrug Resistance protein JCR18_16250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR18_16250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR18_16255 PF01011 PQQ enzyme repeat JCR18_16260 PF04966 Carbohydrate-selective porin, OprB family JCR18_16265 PF02515 CoA-transferase family III JCR18_16270 PF02311 AraC-like ligand binding domain JCR18_16270 PF12833 Helix-turn-helix domain JCR18_16275 PF02803 Thiolase, C-terminal domain JCR18_16275 PF00108 Thiolase, N-terminal domain JCR18_16280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR18_16280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR18_16280 PF00378 Enoyl-CoA hydratase/isomerase JCR18_16305 PF03006 Haemolysin-III related JCR18_16310 PF07690 Major Facilitator Superfamily JCR18_16310 PF00083 Sugar (and other) transporter JCR18_16320 PF07516 SecA Wing and Scaffold domain JCR18_16320 PF01043 SecA preprotein cross-linking domain JCR18_16320 PF07517 SecA DEAD-like domain JCR18_16320 PF02810 SEC-C motif JCR18_16325 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR18_16325 PF00578 AhpC/TSA family JCR18_16330 PF00753 Metallo-beta-lactamase superfamily JCR18_16345 PF02875 Mur ligase family, glutamate ligase domain JCR18_16345 PF08245 Mur ligase middle domain JCR18_16350 PF01039 Carboxyl transferase domain JCR18_16355 PF00290 Tryptophan synthase alpha chain JCR18_16380 PF00291 Pyridoxal-phosphate dependent enzyme JCR18_16385 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JCR18_16390 PF07715 TonB-dependent Receptor Plug Domain JCR18_16390 PF00593 TonB dependent receptor JCR18_16395 PF01923 Cobalamin adenosyltransferase JCR18_16415 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JCR18_16420 PF00486 Transcriptional regulatory protein, C terminal JCR18_16420 PF00072 Response regulator receiver domain JCR18_16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_16425 PF00512 His Kinase A (phospho-acceptor) domain JCR18_16425 PF00672 HAMP domain JCR18_16435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_16435 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR18_16435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_16435 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_16440 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR18_16440 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_16440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_16440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_16445 PF03466 LysR substrate binding domain JCR18_16450 PF02798 Glutathione S-transferase, N-terminal domain JCR18_16450 PF00043 Glutathione S-transferase, C-terminal domain JCR18_16455 PF06146 Phosphate-starvation-inducible E JCR18_16475 PF07715 TonB-dependent Receptor Plug Domain JCR18_16475 PF00593 TonB dependent receptor JCR18_16485 PF00152 tRNA synthetases class II (D, K and N) JCR18_16485 PF02938 GAD domain JCR18_16485 PF01336 OB-fold nucleic acid binding domain JCR18_16490 PF17101 Stealth protein CR1, conserved region 1 JCR18_16490 PF17102 Stealth protein CR3, conserved region 3 JCR18_16490 PF11380 Stealth protein CR2, conserved region 2 JCR18_16515 PF00534 Glycosyl transferases group 1 JCR18_16515 PF13439 Glycosyltransferase Family 4 JCR18_16520 PF00535 Glycosyl transferase family 2 JCR18_16525 PF01522 Polysaccharide deacetylase JCR18_16540 PF01063 Amino-transferase class IV JCR18_16545 PF08335 GlnD PII-uridylyltransferase JCR18_16545 PF03710 Glutamate-ammonia ligase adenylyltransferase JCR18_16550 PF00512 His Kinase A (phospho-acceptor) domain JCR18_16550 PF07689 KaiB domain JCR18_16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_16560 PF02547 Queuosine biosynthesis protein JCR18_16575 PF01702 Queuine tRNA-ribosyltransferase JCR18_16580 PF02699 Preprotein translocase subunit JCR18_16585 PF02355 Protein export membrane protein JCR18_16585 PF13721 SecD export protein N-terminal TM region JCR18_16585 PF07549 SecD/SecF GG Motif JCR18_16590 PF07549 SecD/SecF GG Motif JCR18_16590 PF02355 Protein export membrane protein JCR18_16595 PF04127 DNA / pantothenate metabolism flavoprotein JCR18_16595 PF02441 Flavoprotein JCR18_16600 PF04002 RadC-like JAB domain JCR18_16605 PF01062 Bestrophin, RFP-TM, chloride channel JCR18_16610 PF02811 PHP domain JCR18_16615 PF04279 Intracellular septation protein A JCR18_16620 PF03795 YCII-related domain JCR18_16630 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR18_16630 PF01266 FAD dependent oxidoreductase JCR18_16640 PF04461 Protein of unknown function (DUF520) JCR18_16650 PF03061 Thioesterase superfamily JCR18_16655 PF00085 Thioredoxin JCR18_16660 PF00561 alpha/beta hydrolase fold JCR18_16665 PF00753 Metallo-beta-lactamase superfamily JCR18_16665 PF04273 Putative phosphatase (DUF442) JCR18_16675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR18_16675 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_16710 PF17152 Periplasmic sensor domain JCR18_16710 PF00990 Diguanylate cyclase, GGDEF domain JCR18_16715 PF01389 OmpA-like transmembrane domain JCR18_16715 PF00691 OmpA family JCR18_16720 PF10518 TAT (twin-arginine translocation) pathway signal sequence JCR18_16720 PF00149 Calcineurin-like phosphoesterase JCR18_16725 PF13091 PLD-like domain JCR18_16735 PF01926 50S ribosome-binding GTPase JCR18_16735 PF13167 GTP-binding GTPase N-terminal JCR18_16735 PF16360 GTP-binding GTPase Middle Region JCR18_16755 PF00149 Calcineurin-like phosphoesterase JCR18_16760 PF00398 Ribosomal RNA adenine dimethylase JCR18_16765 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JCR18_16770 PF00572 Ribosomal protein L13 JCR18_16775 PF00380 Ribosomal protein S9/S16 JCR18_16780 PF13417 Glutathione S-transferase, N-terminal domain JCR18_16780 PF00043 Glutathione S-transferase, C-terminal domain JCR18_16785 PF04386 Stringent starvation protein B JCR18_16795 PF02785 Biotin carboxylase C-terminal domain JCR18_16795 PF00289 Biotin carboxylase, N-terminal domain JCR18_16795 PF00364 Biotin-requiring enzyme JCR18_16795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR18_16805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_16805 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_16805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_16810 PF01039 Carboxyl transferase domain JCR18_16825 PF17932 Tetracyclin repressor-like, C-terminal domain JCR18_16825 PF00440 Bacterial regulatory proteins, tetR family JCR18_16830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_16830 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_16830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_16875 PF01066 CDP-alcohol phosphatidyltransferase JCR18_16880 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JCR18_16900 PF00056 lactate/malate dehydrogenase, NAD binding domain JCR18_16900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCR18_16910 PF01551 Peptidase family M23 JCR18_16910 PF01464 Transglycosylase SLT domain JCR18_16910 PF10145 Phage-related minor tail protein JCR18_16915 PF04055 Radical SAM superfamily JCR18_16915 PF01938 TRAM domain JCR18_16915 PF00919 Uncharacterized protein family UPF0004 JCR18_16920 PF02562 PhoH-like protein JCR18_16925 PF02130 Uncharacterized protein family UPF0054 JCR18_16950 PF03358 NADPH-dependent FMN reductase JCR18_16955 PF03631 Virulence factor BrkB JCR18_16960 PF00892 EamA-like transporter family JCR18_16965 PF12833 Helix-turn-helix domain JCR18_16970 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCR18_17015 PF17876 Cold shock domain JCR18_17015 PF00575 S1 RNA binding domain JCR18_17015 PF08206 Ribonuclease B OB domain JCR18_17015 PF00773 RNB domain JCR18_17015 PF08461 Ribonuclease R winged-helix domain JCR18_17020 PF01432 Peptidase family M3 JCR18_17025 PF09526 Probable metal-binding protein (DUF2387) JCR18_17055 PF03937 Flavinator of succinate dehydrogenase JCR18_17060 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_17060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_17060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_17065 PF00743 Flavin-binding monooxygenase-like JCR18_17070 PF01196 Ribosomal protein L17 JCR18_17075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCR18_17075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCR18_17075 PF01000 RNA polymerase Rpb3/RpoA insert domain JCR18_17080 PF01479 S4 domain JCR18_17080 PF00163 Ribosomal protein S4/S9 N-terminal domain JCR18_17085 PF00411 Ribosomal protein S11 JCR18_17090 PF00416 Ribosomal protein S13/S18 JCR18_17095 PF00444 Ribosomal protein L36 JCR18_17100 PF00344 SecY translocase JCR18_17105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCR18_17110 PF00327 Ribosomal protein L30p/L7e JCR18_17115 PF03719 Ribosomal protein S5, C-terminal domain JCR18_17115 PF00333 Ribosomal protein S5, N-terminal domain JCR18_17120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCR18_17125 PF00347 Ribosomal protein L6 JCR18_17130 PF00410 Ribosomal protein S8 JCR18_17135 PF00253 Ribosomal protein S14p/S29e JCR18_17140 PF00673 ribosomal L5P family C-terminus JCR18_17140 PF00281 Ribosomal protein L5 JCR18_17145 PF00467 KOW motif JCR18_17145 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCR18_17150 PF00238 Ribosomal protein L14p/L23e JCR18_17155 PF00366 Ribosomal protein S17 JCR18_17160 PF00831 Ribosomal L29 protein JCR18_17165 PF00252 Ribosomal protein L16p/L10e JCR18_17170 PF00189 Ribosomal protein S3, C-terminal domain JCR18_17170 PF07650 KH domain JCR18_17175 PF00237 Ribosomal protein L22p/L17e JCR18_17180 PF00203 Ribosomal protein S19 JCR18_17185 PF03947 Ribosomal Proteins L2, C-terminal domain JCR18_17185 PF00181 Ribosomal Proteins L2, RNA binding domain JCR18_17190 PF00276 Ribosomal protein L23 JCR18_17195 PF00573 Ribosomal protein L4/L1 family JCR18_17200 PF00297 Ribosomal protein L3 JCR18_17205 PF00338 Ribosomal protein S10p/S20e JCR18_17210 PF00117 Glutamine amidotransferase class-I JCR18_17215 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR18_17220 PF05872 Bacterial protein of unknown function (DUF853) JCR18_17225 PF00042 Globin JCR18_17225 PF00175 Oxidoreductase NAD-binding domain JCR18_17225 PF00970 Oxidoreductase FAD-binding domain JCR18_17230 PF02082 Transcriptional regulator JCR18_17235 PF01926 50S ribosome-binding GTPase JCR18_17245 PF00375 Sodium:dicarboxylate symporter family JCR18_17255 PF01553 Acyltransferase JCR18_17270 PF00271 Helicase conserved C-terminal domain JCR18_17270 PF00270 DEAD/DEAH box helicase JCR18_17270 PF17191 RecG wedge domain JCR18_17275 PF00156 Phosphoribosyl transferase domain JCR18_17280 PF00293 NUDIX domain JCR18_17285 PF03641 Possible lysine decarboxylase JCR18_17290 PF01544 CorA-like Mg2+ transporter protein JCR18_17300 PF05494 MlaC protein JCR18_17310 PF02405 Permease MlaE JCR18_17315 PF00005 ABC transporter JCR18_17325 PF03880 DbpA RNA binding domain JCR18_17325 PF12343 Cold shock protein DEAD box A JCR18_17325 PF00271 Helicase conserved C-terminal domain JCR18_17325 PF00270 DEAD/DEAH box helicase JCR18_17330 PF00459 Inositol monophosphatase family JCR18_17335 PF02779 Transketolase, pyrimidine binding domain JCR18_17335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCR18_17335 PF02780 Transketolase, C-terminal domain JCR18_17340 PF00925 GTP cyclohydrolase II JCR18_17345 PF01218 Coproporphyrinogen III oxidase JCR18_17350 PF08501 Shikimate dehydrogenase substrate binding domain JCR18_17350 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCR18_17350 PF01488 Shikimate / quinate 5-dehydrogenase JCR18_17360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR18_17360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR18_17360 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR18_17360 PF02770 Acyl-CoA dehydrogenase, middle domain JCR18_17370 PF04024 PspC domain JCR18_17375 PF00571 CBS domain JCR18_17400 PF02091 Glycyl-tRNA synthetase alpha subunit JCR18_17405 PF05746 DALR anticodon binding domain JCR18_17405 PF02092 Glycyl-tRNA synthetase beta subunit JCR18_17415 PF00892 EamA-like transporter family JCR18_17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_17420 PF03466 LysR substrate binding domain JCR18_17435 PF05922 Peptidase inhibitor I9 JCR18_17435 PF00082 Subtilase family JCR18_17450 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JCR18_17455 PF04996 Succinylarginine dihydrolase JCR18_17460 PF00171 Aldehyde dehydrogenase family JCR18_17465 PF04958 Arginine N-succinyltransferase beta subunit JCR18_17470 PF00202 Aminotransferase class-III JCR18_17475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR18_17475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR18_17480 PF00324 Amino acid permease JCR18_17510 PF13614 AAA domain JCR18_17515 PF01594 AI-2E family transporter JCR18_17520 PF00080 Copper/zinc superoxide dismutase (SODC) JCR18_17525 PF12805 FUSC-like inner membrane protein yccS JCR18_17530 PF07690 Major Facilitator Superfamily JCR18_17540 PF02525 Flavodoxin-like fold JCR18_17545 PF03992 Antibiotic biosynthesis monooxygenase JCR18_17555 PF01565 FAD binding domain JCR18_17555 PF02913 FAD linked oxidases, C-terminal domain JCR18_17560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR18_17560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR18_17565 PF00892 EamA-like transporter family JCR18_17570 PF00892 EamA-like transporter family JCR18_17580 PF01925 Sulfite exporter TauE/SafE JCR18_17585 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCR18_17585 PF09157 Pseudouridine synthase II TruB, C-terminal JCR18_17585 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCR18_17590 PF03280 Proteobacterial lipase chaperone protein JCR18_17595 PF00561 alpha/beta hydrolase fold JCR18_17600 PF01245 Ribosomal protein L19 JCR18_17605 PF01746 tRNA (Guanine-1)-methyltransferase JCR18_17610 PF01782 RimM N-terminal domain JCR18_17610 PF05239 PRC-barrel domain JCR18_17615 PF00886 Ribosomal protein S16 JCR18_17655 PF02401 LytB protein JCR18_17660 PF00625 Guanylate kinase JCR18_17665 PF01192 RNA polymerase Rpb6 JCR18_17675 PF13291 ACT domain JCR18_17675 PF04607 Region found in RelA / SpoT proteins JCR18_17675 PF02824 TGS domain JCR18_17680 PF01042 Endoribonuclease L-PSP JCR18_17685 PF04324 BFD-like [2Fe-2S] binding domain JCR18_17690 PF00210 Ferritin-like domain JCR18_17695 PF11846 Virulence factor membrane-bound polymerase, C-terminal JCR18_17695 PF15864 Protein glycosylation ligase JCR18_17695 PF04932 O-Antigen ligase JCR18_17705 PF00114 Pilin (bacterial filament) JCR18_17705 PF07963 Prokaryotic N-terminal methylation motif JCR18_17715 PF04536 TPM domain JCR18_17720 PF04011 LemA family JCR18_17730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JCR18_17730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR18_17735 PF01493 GXGXG motif JCR18_17735 PF04898 Glutamate synthase central domain JCR18_17735 PF01645 Conserved region in glutamate synthase JCR18_17735 PF00310 Glutamine amidotransferases class-II JCR18_17745 PF01761 3-dehydroquinate synthase JCR18_17750 PF01202 Shikimate kinase JCR18_17755 PF07660 Secretin and TonB N terminus short domain JCR18_17755 PF11741 AMIN domain JCR18_17755 PF00263 Bacterial type II and III secretion system protein JCR18_17755 PF03958 Bacterial type II/III secretion system short domain JCR18_17765 PF04350 Pilus assembly protein, PilO JCR18_17770 PF05137 Fimbrial assembly protein (PilN) JCR18_17775 PF11104 Type IV pilus assembly protein PilM; JCR18_17780 PF17092 Penicillin-binding protein OB-like domain JCR18_17780 PF00905 Penicillin binding protein transpeptidase domain JCR18_17780 PF00912 Transglycosylase JCR18_17785 PF13847 Methyltransferase domain JCR18_17795 PF00953 Glycosyl transferase family 4 JCR18_17800 PF08245 Mur ligase middle domain JCR18_17800 PF02875 Mur ligase family, glutamate ligase domain JCR18_17800 PF01225 Mur ligase family, catalytic domain JCR18_17805 PF02875 Mur ligase family, glutamate ligase domain JCR18_17805 PF08245 Mur ligase middle domain JCR18_17805 PF01225 Mur ligase family, catalytic domain JCR18_17810 PF00905 Penicillin binding protein transpeptidase domain JCR18_17810 PF03717 Penicillin-binding Protein dimerisation domain JCR18_17820 PF01795 MraW methylase family JCR18_17835 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR18_17850 PF00324 Amino acid permease JCR18_17880 PF01545 Cation efflux family JCR18_17885 PF00873 AcrB/AcrD/AcrF family JCR18_17890 PF00529 HlyD membrane-fusion protein of T1SS JCR18_17890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_17910 PF04191 Phospholipid methyltransferase JCR18_17935 PF00005 ABC transporter JCR18_17935 PF12848 ABC transporter JCR18_17940 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR18_17945 PF00106 short chain dehydrogenase JCR18_17950 PF01740 STAS domain JCR18_17950 PF00916 Sulfate permease family JCR18_17955 PF09371 Tex-like protein N-terminal domain JCR18_17955 PF00575 S1 RNA binding domain JCR18_17955 PF17674 HHH domain JCR18_17955 PF16921 Tex protein YqgF-like domain JCR18_17960 PF00072 Response regulator receiver domain JCR18_17960 PF00486 Transcriptional regulatory protein, C terminal JCR18_17965 PF00672 HAMP domain JCR18_17965 PF00512 His Kinase A (phospho-acceptor) domain JCR18_17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_17975 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JCR18_17975 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JCR18_17980 PF00583 Acetyltransferase (GNAT) family JCR18_18000 PF00475 Imidazoleglycerol-phosphate dehydratase JCR18_18005 PF00117 Glutamine amidotransferase class-I JCR18_18020 PF00977 Histidine biosynthesis protein JCR18_18035 PF03992 Antibiotic biosynthesis monooxygenase JCR18_18050 PF01636 Phosphotransferase enzyme family JCR18_18055 PF00977 Histidine biosynthesis protein JCR18_18070 PF00230 Major intrinsic protein JCR18_18095 PF02705 K+ potassium transporter JCR18_18115 PF02525 Flavodoxin-like fold JCR18_18120 PF01638 HxlR-like helix-turn-helix JCR18_18150 PF02311 AraC-like ligand binding domain JCR18_18150 PF12833 Helix-turn-helix domain JCR18_18155 PF00248 Aldo/keto reductase family JCR18_18175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_18175 PF03466 LysR substrate binding domain JCR18_18180 PF07690 Major Facilitator Superfamily JCR18_18200 PF01593 Flavin containing amine oxidoreductase JCR18_18205 PF02678 Pirin JCR18_18205 PF05726 Pirin C-terminal cupin domain JCR18_18210 PF00857 Isochorismatase family JCR18_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_18220 PF00171 Aldehyde dehydrogenase family JCR18_18225 PF00202 Aminotransferase class-III JCR18_18230 PF00392 Bacterial regulatory proteins, gntR family JCR18_18230 PF00155 Aminotransferase class I and II JCR18_18235 PF00324 Amino acid permease JCR18_18245 PF03591 AzlC protein JCR18_18255 PF00436 Single-strand binding protein family JCR18_18260 PF07690 Major Facilitator Superfamily JCR18_18270 PF02581 Thiamine monophosphate synthase JCR18_18270 PF03070 TENA/THI-4/PQQC family JCR18_18270 PF08543 Phosphomethylpyrimidine kinase JCR18_18275 PF06942 GlpM protein JCR18_18285 PF00107 Zinc-binding dehydrogenase JCR18_18285 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_18290 PF16925 Tetracyclin repressor-like, C-terminal domain JCR18_18290 PF00440 Bacterial regulatory proteins, tetR family JCR18_18295 PF00005 ABC transporter JCR18_18295 PF17760 UvrA interaction domain JCR18_18295 PF17755 UvrA DNA-binding domain JCR18_18305 PF00990 Diguanylate cyclase, GGDEF domain JCR18_18315 PF02028 BCCT, betaine/carnitine/choline family transporter JCR18_18325 PF00474 Sodium:solute symporter family JCR18_18330 PF04341 Protein of unknown function, DUF485 JCR18_18335 PF00072 Response regulator receiver domain JCR18_18335 PF01627 Hpt domain JCR18_18335 PF00512 His Kinase A (phospho-acceptor) domain JCR18_18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_18335 PF00672 HAMP domain JCR18_18345 PF00072 Response regulator receiver domain JCR18_18345 PF00196 Bacterial regulatory proteins, luxR family JCR18_18350 PF03358 NADPH-dependent FMN reductase JCR18_18355 PF00296 Luciferase-like monooxygenase JCR18_18360 PF00872 Transposase, Mutator family JCR18_18365 PF01037 Lrp/AsnC ligand binding domain JCR18_18370 PF00857 Isochorismatase family JCR18_18375 PF16177 Acetyl-coenzyme A synthetase N-terminus JCR18_18375 PF13193 AMP-binding enzyme C-terminal domain JCR18_18375 PF00501 AMP-binding enzyme JCR18_18385 PF00924 Mechanosensitive ion channel JCR18_18390 PF04452 RNA methyltransferase JCR18_18395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JCR18_18400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR18_18420 PF01368 DHH family JCR18_18420 PF17768 RecJ OB domain JCR18_18420 PF02272 DHHA1 domain JCR18_18425 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JCR18_18425 PF01243 Pyridoxamine 5'-phosphate oxidase JCR18_18430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR18_18430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR18_18430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR18_18430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR18_18435 PF00478 IMP dehydrogenase / GMP reductase domain JCR18_18435 PF00571 CBS domain JCR18_18440 PF03692 Putative zinc- or iron-chelating domain JCR18_18445 PF00258 Flavodoxin JCR18_18445 PF01613 Flavin reductase like domain JCR18_18450 PF07715 TonB-dependent Receptor Plug Domain JCR18_18450 PF00593 TonB dependent receptor JCR18_18455 PF01169 Uncharacterized protein family UPF0016 JCR18_18465 PF02817 e3 binding domain JCR18_18465 PF00364 Biotin-requiring enzyme JCR18_18465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR18_18470 PF00456 Transketolase, thiamine diphosphate binding domain JCR18_18470 PF17831 Pyruvate dehydrogenase E1 component middle domain JCR18_18475 PF01551 Peptidase family M23 JCR18_18485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JCR18_18490 PF12327 FtsZ family, C-terminal domain JCR18_18490 PF00091 Tubulin/FtsZ family, GTPase domain JCR18_18495 PF02491 SHS2 domain inserted in FTSA JCR18_18500 PF03799 Cell division protein FtsQ JCR18_18500 PF08478 POTRA domain, FtsQ-type JCR18_18505 PF07478 D-ala D-ala ligase C-terminus JCR18_18505 PF01820 D-ala D-ala ligase N-terminus JCR18_18510 PF08245 Mur ligase middle domain JCR18_18510 PF01225 Mur ligase family, catalytic domain JCR18_18510 PF02875 Mur ligase family, glutamate ligase domain JCR18_18515 PF04101 Glycosyltransferase family 28 C-terminal domain JCR18_18515 PF03033 Glycosyltransferase family 28 N-terminal domain JCR18_18520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JCR18_18520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JCR18_18530 PF07715 TonB-dependent Receptor Plug Domain JCR18_18530 PF00593 TonB dependent receptor JCR18_18535 PF00156 Phosphoribosyl transferase domain JCR18_18540 PF03372 Endonuclease/Exonuclease/phosphatase family JCR18_18545 PF03960 ArsC family JCR18_18555 PF07859 alpha/beta hydrolase fold JCR18_18560 PF00990 Diguanylate cyclase, GGDEF domain JCR18_18560 PF07694 5TMR of 5TMR-LYT JCR18_18565 PF11412 Disulphide bond corrector protein DsbC JCR18_18565 PF02683 Cytochrome C biogenesis protein transmembrane region JCR18_18595 PF00576 HIUase/Transthyretin family JCR18_18600 PF00860 Permease family JCR18_18610 PF01494 FAD binding domain JCR18_18615 PF03561 Allantoicase repeat JCR18_18620 PF04115 Ureidoglycolate lyase JCR18_18625 PF00106 short chain dehydrogenase JCR18_18630 PF00204 DNA gyrase B JCR18_18630 PF00986 DNA gyrase B subunit, carboxyl terminus JCR18_18630 PF01751 Toprim domain JCR18_18630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_18635 PF05728 Uncharacterised protein family (UPF0227) JCR18_18650 PF01476 LysM domain JCR18_18650 PF00877 NlpC/P60 family JCR18_18655 PF13296 Putative type VI secretion system Rhs element Vgr JCR18_18655 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR18_18655 PF04717 Type VI secretion system, phage-baseplate injector JCR18_18660 PF02600 Disulfide bond formation protein DsbB JCR18_18665 PF04262 Glutamate-cysteine ligase JCR18_18680 PF04286 Protein of unknown function (DUF445) JCR18_18685 PF00155 Aminotransferase class I and II JCR18_18690 PF01554 MatE JCR18_18695 PF00106 short chain dehydrogenase JCR18_18705 PF00072 Response regulator receiver domain JCR18_18705 PF00486 Transcriptional regulatory protein, C terminal JCR18_18710 PF00989 PAS fold JCR18_18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_18710 PF00512 His Kinase A (phospho-acceptor) domain JCR18_18710 PF11808 Phosphate regulon sensor protein PhoR JCR18_18730 PF03069 Acetamidase/Formamidase family JCR18_18735 PF02666 Phosphatidylserine decarboxylase JCR18_18740 PF00581 Rhodanese-like domain JCR18_18745 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCR18_18745 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR18_18750 PF02580 D-Tyr-tRNA(Tyr) deacylase JCR18_18775 PF00925 GTP cyclohydrolase II JCR18_18775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR18_18780 PF00885 6,7-dimethyl-8-ribityllumazine synthase JCR18_18785 PF01029 NusB family JCR18_18790 PF00586 AIR synthase related protein, N-terminal domain JCR18_18790 PF02769 AIR synthase related protein, C-terminal domain JCR18_18795 PF04608 Phosphatidylglycerophosphatase A JCR18_18800 PF14602 Hexapeptide repeat of succinyl-transferase JCR18_18800 PF12804 MobA-like NTP transferase domain JCR18_18800 PF00132 Bacterial transferase hexapeptide (six repeats) JCR18_18805 PF01380 SIS domain JCR18_18810 PF01177 Asp/Glu/Hydantoin racemase JCR18_18825 PF00491 Arginase family JCR18_18830 PF01979 Amidohydrolase family JCR18_18835 PF00324 Amino acid permease JCR18_18840 PF00221 Aromatic amino acid lyase JCR18_18845 PF01175 Urocanase Rossmann-like domain JCR18_18845 PF17392 Urocanase C-terminal domain JCR18_18845 PF17391 Urocanase N-terminal domain JCR18_18850 PF05962 HutD JCR18_18855 PF07702 UTRA domain JCR18_18855 PF00392 Bacterial regulatory proteins, gntR family JCR18_18865 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR18_18865 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR18_18875 PF00324 Amino acid permease JCR18_18885 PF02798 Glutathione S-transferase, N-terminal domain JCR18_18885 PF14497 Glutathione S-transferase, C-terminal domain JCR18_18890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR18_18900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR18_18905 PF04463 Protein of unknown function (DUF523) JCR18_18910 PF01554 MatE JCR18_18915 PF01758 Sodium Bile acid symporter family JCR18_18920 PF00857 Isochorismatase family JCR18_18925 PF00701 Dihydrodipicolinate synthetase family JCR18_18935 PF01259 SAICAR synthetase JCR18_18945 PF01226 Formate/nitrite transporter JCR18_18950 PF00004 ATPase family associated with various cellular activities (AAA) JCR18_18950 PF12002 MgsA AAA+ ATPase C terminal JCR18_18950 PF16193 AAA C-terminal domain JCR18_18955 PF07995 Glucose / Sorbosone dehydrogenase JCR18_18960 PF03692 Putative zinc- or iron-chelating domain JCR18_18965 PF07043 Protein of unknown function (DUF1328) JCR18_18980 PF10576 Iron-sulfur binding domain of endonuclease III JCR18_18980 PF14815 NUDIX domain JCR18_18980 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR18_18980 PF00633 Helix-hairpin-helix motif JCR18_18995 PF03352 Methyladenine glycosylase JCR18_19000 PF08240 Alcohol dehydrogenase GroES-like domain JCR18_19000 PF00107 Zinc-binding dehydrogenase JCR18_19005 PF00155 Aminotransferase class I and II JCR18_19005 PF00392 Bacterial regulatory proteins, gntR family JCR18_19020 PF03466 LysR substrate binding domain JCR18_19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_19025 PF00248 Aldo/keto reductase family JCR18_19030 PF07690 Major Facilitator Superfamily JCR18_19040 PF01113 Dihydrodipicolinate reductase, N-terminus JCR18_19040 PF05173 Dihydrodipicolinate reductase, C-terminus JCR18_19050 PF00226 DnaJ domain JCR18_19050 PF00684 DnaJ central domain JCR18_19050 PF01556 DnaJ C terminal domain JCR18_19060 PF00873 AcrB/AcrD/AcrF family JCR18_19065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR18_19070 PF08361 MAATS-type transcriptional repressor, C-terminal region JCR18_19070 PF00440 Bacterial regulatory proteins, tetR family JCR18_19075 PF00311 Phosphoenolpyruvate carboxylase JCR18_19080 PF00860 Permease family JCR18_19085 PF03466 LysR substrate binding domain JCR18_19085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR18_19100 PF00920 Dehydratase family JCR18_19105 PF02911 Formyl transferase, C-terminal domain JCR18_19105 PF00551 Formyl transferase JCR18_19110 PF01029 NusB family JCR18_19110 PF01189 16S rRNA methyltransferase RsmB/F JCR18_19170 PF00579 tRNA synthetases class I (W and Y) JCR18_19175 PF03702 Anhydro-N-acetylmuramic acid kinase JCR18_19180 PF00561 alpha/beta hydrolase fold JCR18_19185 PF01521 Iron-sulphur cluster biosynthesis JCR18_19205 PF12848 ABC transporter JCR18_19205 PF00005 ABC transporter JCR18_19210 PF09335 SNARE associated Golgi protein JCR18_19220 PF01751 Toprim domain JCR18_19220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR18_19220 PF00986 DNA gyrase B subunit, carboxyl terminus JCR18_19220 PF00204 DNA gyrase B JCR18_19220 PF18053 DNA gyrase B subunit insert domain JCR18_19225 PF02463 RecF/RecN/SMC N terminal domain JCR18_19230 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR18_19230 PF02767 DNA polymerase III beta subunit, central domain JCR18_19230 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR18_19240 PF11638 DnaA N-terminal domain JCR18_19240 PF08299 Bacterial dnaA protein helix-turn-helix JCR18_19240 PF00308 Bacterial dnaA protein JCR18_19315 PF00684 DnaJ central domain JCR18_19315 PF01556 DnaJ C terminal domain JCR18_19315 PF00226 DnaJ domain JCR18_19350 PF18272 single-stranded DNA binding TraI N-terminal subdomain JCR18_19350 PF07057 DNA helicase TraI JCR18_19350 PF08751 TrwC relaxase JCR18_19350 PF18340 DNA relaxase TraI 2B/2B-like domain JCR18_19390 PF00239 Resolvase, N terminal domain JCR18_19390 PF02796 Helix-turn-helix domain of resolvase JCR18_19405 PF01464 Transglycosylase SLT domain JCR18_19440 PF10411 Disulfide bond isomerase protein N-terminus JCR18_19440 PF13098 Thioredoxin-like domain JCR18_19475 PF06834 TraU protein JCR18_19485 PF06986 Type-1V conjugative transfer system mating pair stabilisation JCR18_19500 PF06122 Conjugative relaxosome accessory transposon protein JCR18_19520 PF00817 impB/mucB/samB family JCR18_19520 PF13438 Domain of unknown function (DUF4113) JCR18_19520 PF11799 impB/mucB/samB family C-terminal domain JCR18_19610 PF00565 Staphylococcal nuclease homologue JCR18_19615 PF00816 H-NS histone family JCR18_19675 PF13614 AAA domain JCR18_19680 PF17762 HTH domain found in ParB protein JCR18_19680 PF02195 ParB-like nuclease domain JCR18_19700 PF05816 Toxic anion resistance protein (TelA)