locus-tag class description JCR19_00010 PF00468 Ribosomal protein L34 JCR19_00015 PF00308 Bacterial dnaA protein JCR19_00015 PF08299 Bacterial dnaA protein helix-turn-helix JCR19_00015 PF11638 DnaA N-terminal domain JCR19_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR19_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR19_00020 PF02767 DNA polymerase III beta subunit, central domain JCR19_00025 PF02463 RecF/RecN/SMC N terminal domain JCR19_00030 PF00986 DNA gyrase B subunit, carboxyl terminus JCR19_00030 PF00204 DNA gyrase B JCR19_00030 PF18053 DNA gyrase B subunit insert domain JCR19_00030 PF01751 Toprim domain JCR19_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_00040 PF09335 SNARE associated Golgi protein JCR19_00045 PF12848 ABC transporter JCR19_00045 PF00005 ABC transporter JCR19_00065 PF01521 Iron-sulphur cluster biosynthesis JCR19_00070 PF00561 alpha/beta hydrolase fold JCR19_00075 PF03702 Anhydro-N-acetylmuramic acid kinase JCR19_00080 PF00579 tRNA synthetases class I (W and Y) JCR19_00140 PF01189 16S rRNA methyltransferase RsmB/F JCR19_00140 PF01029 NusB family JCR19_00145 PF00551 Formyl transferase JCR19_00145 PF02911 Formyl transferase, C-terminal domain JCR19_00150 PF00920 Dehydratase family JCR19_00165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_00165 PF03466 LysR substrate binding domain JCR19_00170 PF00860 Permease family JCR19_00175 PF00311 Phosphoenolpyruvate carboxylase JCR19_00180 PF08361 MAATS-type transcriptional repressor, C-terminal region JCR19_00180 PF00440 Bacterial regulatory proteins, tetR family JCR19_00185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_00190 PF00873 AcrB/AcrD/AcrF family JCR19_00200 PF00684 DnaJ central domain JCR19_00200 PF01556 DnaJ C terminal domain JCR19_00200 PF00226 DnaJ domain JCR19_00210 PF01113 Dihydrodipicolinate reductase, N-terminus JCR19_00210 PF05173 Dihydrodipicolinate reductase, C-terminus JCR19_00220 PF07690 Major Facilitator Superfamily JCR19_00225 PF00248 Aldo/keto reductase family JCR19_00230 PF03466 LysR substrate binding domain JCR19_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_00245 PF00392 Bacterial regulatory proteins, gntR family JCR19_00245 PF00155 Aminotransferase class I and II JCR19_00250 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_00250 PF00107 Zinc-binding dehydrogenase JCR19_00255 PF03352 Methyladenine glycosylase JCR19_00270 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR19_00270 PF10576 Iron-sulfur binding domain of endonuclease III JCR19_00270 PF14815 NUDIX domain JCR19_00270 PF00633 Helix-hairpin-helix motif JCR19_00285 PF07043 Protein of unknown function (DUF1328) JCR19_00290 PF03692 Putative zinc- or iron-chelating domain JCR19_00295 PF07995 Glucose / Sorbosone dehydrogenase JCR19_00300 PF12002 MgsA AAA+ ATPase C terminal JCR19_00300 PF00004 ATPase family associated with various cellular activities (AAA) JCR19_00300 PF16193 AAA C-terminal domain JCR19_00305 PF01226 Formate/nitrite transporter JCR19_00315 PF01259 SAICAR synthetase JCR19_00325 PF00701 Dihydrodipicolinate synthetase family JCR19_00330 PF00857 Isochorismatase family JCR19_00335 PF01758 Sodium Bile acid symporter family JCR19_00340 PF01554 MatE JCR19_00345 PF04463 Protein of unknown function (DUF523) JCR19_00350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR19_00360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR19_00365 PF02798 Glutathione S-transferase, N-terminal domain JCR19_00365 PF14497 Glutathione S-transferase, C-terminal domain JCR19_00375 PF00324 Amino acid permease JCR19_00385 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR19_00385 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR19_00395 PF07702 UTRA domain JCR19_00395 PF00392 Bacterial regulatory proteins, gntR family JCR19_00400 PF05962 HutD JCR19_00405 PF01175 Urocanase Rossmann-like domain JCR19_00405 PF17391 Urocanase N-terminal domain JCR19_00405 PF17392 Urocanase C-terminal domain JCR19_00410 PF00221 Aromatic amino acid lyase JCR19_00415 PF00324 Amino acid permease JCR19_00420 PF01979 Amidohydrolase family JCR19_00425 PF00491 Arginase family JCR19_00440 PF01177 Asp/Glu/Hydantoin racemase JCR19_00445 PF01380 SIS domain JCR19_00450 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_00450 PF14602 Hexapeptide repeat of succinyl-transferase JCR19_00450 PF12804 MobA-like NTP transferase domain JCR19_00455 PF04608 Phosphatidylglycerophosphatase A JCR19_00460 PF00586 AIR synthase related protein, N-terminal domain JCR19_00460 PF02769 AIR synthase related protein, C-terminal domain JCR19_00465 PF01029 NusB family JCR19_00470 PF00885 6,7-dimethyl-8-ribityllumazine synthase JCR19_00475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR19_00475 PF00925 GTP cyclohydrolase II JCR19_00500 PF02580 D-Tyr-tRNA(Tyr) deacylase JCR19_00505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR19_00505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCR19_00510 PF00581 Rhodanese-like domain JCR19_00515 PF02666 Phosphatidylserine decarboxylase JCR19_00520 PF03069 Acetamidase/Formamidase family JCR19_00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_00540 PF00512 His Kinase A (phospho-acceptor) domain JCR19_00540 PF11808 Phosphate regulon sensor protein PhoR JCR19_00540 PF00989 PAS fold JCR19_00545 PF00072 Response regulator receiver domain JCR19_00545 PF00486 Transcriptional regulatory protein, C terminal JCR19_00555 PF00106 short chain dehydrogenase JCR19_00560 PF01554 MatE JCR19_00565 PF00155 Aminotransferase class I and II JCR19_00570 PF04286 Protein of unknown function (DUF445) JCR19_00585 PF04262 Glutamate-cysteine ligase JCR19_00590 PF02600 Disulfide bond formation protein DsbB JCR19_00595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR19_00595 PF04717 Type VI secretion system, phage-baseplate injector JCR19_00595 PF13296 Putative type VI secretion system Rhs element Vgr JCR19_00600 PF01476 LysM domain JCR19_00600 PF00877 NlpC/P60 family JCR19_00615 PF05728 Uncharacterised protein family (UPF0227) JCR19_00620 PF00986 DNA gyrase B subunit, carboxyl terminus JCR19_00620 PF01751 Toprim domain JCR19_00620 PF00204 DNA gyrase B JCR19_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_00625 PF00106 short chain dehydrogenase JCR19_00630 PF04115 Ureidoglycolate lyase JCR19_00635 PF03561 Allantoicase repeat JCR19_00640 PF01494 FAD binding domain JCR19_00650 PF00860 Permease family JCR19_00655 PF00576 HIUase/Transthyretin family JCR19_00685 PF02683 Cytochrome C biogenesis protein transmembrane region JCR19_00685 PF11412 Disulphide bond corrector protein DsbC JCR19_00690 PF00990 Diguanylate cyclase, GGDEF domain JCR19_00690 PF07694 5TMR of 5TMR-LYT JCR19_00695 PF07859 alpha/beta hydrolase fold JCR19_00705 PF03960 ArsC family JCR19_00710 PF03372 Endonuclease/Exonuclease/phosphatase family JCR19_00715 PF00156 Phosphoribosyl transferase domain JCR19_00720 PF07715 TonB-dependent Receptor Plug Domain JCR19_00720 PF00593 TonB dependent receptor JCR19_00730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JCR19_00730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JCR19_00735 PF04101 Glycosyltransferase family 28 C-terminal domain JCR19_00735 PF03033 Glycosyltransferase family 28 N-terminal domain JCR19_00740 PF02875 Mur ligase family, glutamate ligase domain JCR19_00740 PF08245 Mur ligase middle domain JCR19_00740 PF01225 Mur ligase family, catalytic domain JCR19_00745 PF01820 D-ala D-ala ligase N-terminus JCR19_00745 PF07478 D-ala D-ala ligase C-terminus JCR19_00750 PF08478 POTRA domain, FtsQ-type JCR19_00750 PF03799 Cell division protein FtsQ JCR19_00755 PF02491 SHS2 domain inserted in FTSA JCR19_00760 PF00091 Tubulin/FtsZ family, GTPase domain JCR19_00760 PF12327 FtsZ family, C-terminal domain JCR19_00765 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JCR19_00775 PF01551 Peptidase family M23 JCR19_00780 PF00456 Transketolase, thiamine diphosphate binding domain JCR19_00780 PF17831 Pyruvate dehydrogenase E1 component middle domain JCR19_00785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR19_00785 PF02817 e3 binding domain JCR19_00785 PF00364 Biotin-requiring enzyme JCR19_00795 PF01169 Uncharacterized protein family UPF0016 JCR19_00800 PF07715 TonB-dependent Receptor Plug Domain JCR19_00800 PF00593 TonB dependent receptor JCR19_00805 PF00258 Flavodoxin JCR19_00805 PF01613 Flavin reductase like domain JCR19_00810 PF03692 Putative zinc- or iron-chelating domain JCR19_00815 PF00571 CBS domain JCR19_00815 PF00478 IMP dehydrogenase / GMP reductase domain JCR19_00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR19_00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR19_00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR19_00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR19_00825 PF01243 Pyridoxamine 5'-phosphate oxidase JCR19_00825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JCR19_00830 PF02272 DHHA1 domain JCR19_00830 PF01368 DHH family JCR19_00830 PF17768 RecJ OB domain JCR19_00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR19_00855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JCR19_00860 PF04452 RNA methyltransferase JCR19_00865 PF00924 Mechanosensitive ion channel JCR19_00875 PF16177 Acetyl-coenzyme A synthetase N-terminus JCR19_00875 PF00501 AMP-binding enzyme JCR19_00875 PF13193 AMP-binding enzyme C-terminal domain JCR19_00880 PF00857 Isochorismatase family JCR19_00885 PF01037 Lrp/AsnC ligand binding domain JCR19_00890 PF00872 Transposase, Mutator family JCR19_00895 PF00296 Luciferase-like monooxygenase JCR19_00900 PF03358 NADPH-dependent FMN reductase JCR19_00905 PF00196 Bacterial regulatory proteins, luxR family JCR19_00905 PF00072 Response regulator receiver domain JCR19_00915 PF00072 Response regulator receiver domain JCR19_00915 PF01627 Hpt domain JCR19_00915 PF00672 HAMP domain JCR19_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_00915 PF00512 His Kinase A (phospho-acceptor) domain JCR19_00920 PF04341 Protein of unknown function, DUF485 JCR19_00925 PF00474 Sodium:solute symporter family JCR19_00935 PF02028 BCCT, betaine/carnitine/choline family transporter JCR19_00945 PF00990 Diguanylate cyclase, GGDEF domain JCR19_00955 PF17760 UvrA interaction domain JCR19_00955 PF17755 UvrA DNA-binding domain JCR19_00955 PF00005 ABC transporter JCR19_00960 PF16925 Tetracyclin repressor-like, C-terminal domain JCR19_00960 PF00440 Bacterial regulatory proteins, tetR family JCR19_00965 PF00107 Zinc-binding dehydrogenase JCR19_00965 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_00975 PF06942 GlpM protein JCR19_00980 PF02581 Thiamine monophosphate synthase JCR19_00980 PF08543 Phosphomethylpyrimidine kinase JCR19_00980 PF03070 TENA/THI-4/PQQC family JCR19_00990 PF07690 Major Facilitator Superfamily JCR19_00995 PF00436 Single-strand binding protein family JCR19_01005 PF03591 AzlC protein JCR19_01015 PF00324 Amino acid permease JCR19_01020 PF00392 Bacterial regulatory proteins, gntR family JCR19_01020 PF00155 Aminotransferase class I and II JCR19_01025 PF00202 Aminotransferase class-III JCR19_01030 PF00171 Aldehyde dehydrogenase family JCR19_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_01040 PF00857 Isochorismatase family JCR19_01045 PF05726 Pirin C-terminal cupin domain JCR19_01045 PF02678 Pirin JCR19_01050 PF01593 Flavin containing amine oxidoreductase JCR19_01070 PF07690 Major Facilitator Superfamily JCR19_01075 PF03466 LysR substrate binding domain JCR19_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_01095 PF00248 Aldo/keto reductase family JCR19_01100 PF02311 AraC-like ligand binding domain JCR19_01100 PF12833 Helix-turn-helix domain JCR19_01130 PF01638 HxlR-like helix-turn-helix JCR19_01135 PF02525 Flavodoxin-like fold JCR19_01155 PF02705 K+ potassium transporter JCR19_01180 PF00230 Major intrinsic protein JCR19_01195 PF00977 Histidine biosynthesis protein JCR19_01200 PF01636 Phosphotransferase enzyme family JCR19_01215 PF03992 Antibiotic biosynthesis monooxygenase JCR19_01230 PF00977 Histidine biosynthesis protein JCR19_01245 PF00117 Glutamine amidotransferase class-I JCR19_01250 PF00475 Imidazoleglycerol-phosphate dehydratase JCR19_01270 PF00583 Acetyltransferase (GNAT) family JCR19_01275 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JCR19_01275 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JCR19_01285 PF00512 His Kinase A (phospho-acceptor) domain JCR19_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_01285 PF00672 HAMP domain JCR19_01290 PF00072 Response regulator receiver domain JCR19_01290 PF00486 Transcriptional regulatory protein, C terminal JCR19_01295 PF09371 Tex-like protein N-terminal domain JCR19_01295 PF17674 HHH domain JCR19_01295 PF16921 Tex protein YqgF-like domain JCR19_01295 PF00575 S1 RNA binding domain JCR19_01300 PF01740 STAS domain JCR19_01300 PF00916 Sulfate permease family JCR19_01305 PF00106 short chain dehydrogenase JCR19_01310 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR19_01315 PF12848 ABC transporter JCR19_01315 PF00005 ABC transporter JCR19_01340 PF04191 Phospholipid methyltransferase JCR19_01360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_01360 PF00529 HlyD membrane-fusion protein of T1SS JCR19_01365 PF00873 AcrB/AcrD/AcrF family JCR19_01370 PF01545 Cation efflux family JCR19_01400 PF00324 Amino acid permease JCR19_01415 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR19_01430 PF01795 MraW methylase family JCR19_01440 PF03717 Penicillin-binding Protein dimerisation domain JCR19_01440 PF00905 Penicillin binding protein transpeptidase domain JCR19_01445 PF02875 Mur ligase family, glutamate ligase domain JCR19_01445 PF08245 Mur ligase middle domain JCR19_01445 PF01225 Mur ligase family, catalytic domain JCR19_01450 PF01225 Mur ligase family, catalytic domain JCR19_01450 PF02875 Mur ligase family, glutamate ligase domain JCR19_01450 PF08245 Mur ligase middle domain JCR19_01455 PF00953 Glycosyl transferase family 4 JCR19_01465 PF13847 Methyltransferase domain JCR19_01470 PF17092 Penicillin-binding protein OB-like domain JCR19_01470 PF00912 Transglycosylase JCR19_01470 PF00905 Penicillin binding protein transpeptidase domain JCR19_01475 PF11104 Type IV pilus assembly protein PilM; JCR19_01480 PF05137 Fimbrial assembly protein (PilN) JCR19_01485 PF04350 Pilus assembly protein, PilO JCR19_01495 PF00263 Bacterial type II and III secretion system protein JCR19_01495 PF03958 Bacterial type II/III secretion system short domain JCR19_01495 PF07660 Secretin and TonB N terminus short domain JCR19_01495 PF11741 AMIN domain JCR19_01500 PF01202 Shikimate kinase JCR19_01505 PF01761 3-dehydroquinate synthase JCR19_01515 PF01493 GXGXG motif JCR19_01515 PF01645 Conserved region in glutamate synthase JCR19_01515 PF04898 Glutamate synthase central domain JCR19_01515 PF00310 Glutamine amidotransferases class-II JCR19_01520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JCR19_01520 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_01530 PF04011 LemA family JCR19_01535 PF04536 TPM domain JCR19_01545 PF00114 Pilin (bacterial filament) JCR19_01545 PF07963 Prokaryotic N-terminal methylation motif JCR19_01555 PF04932 O-Antigen ligase JCR19_01555 PF15864 Protein glycosylation ligase JCR19_01555 PF11846 Virulence factor membrane-bound polymerase, C-terminal JCR19_01560 PF00210 Ferritin-like domain JCR19_01565 PF04324 BFD-like [2Fe-2S] binding domain JCR19_01570 PF01042 Endoribonuclease L-PSP JCR19_01575 PF04607 Region found in RelA / SpoT proteins JCR19_01575 PF02824 TGS domain JCR19_01575 PF13291 ACT domain JCR19_01585 PF01192 RNA polymerase Rpb6 JCR19_01590 PF00625 Guanylate kinase JCR19_01595 PF02401 LytB protein JCR19_01635 PF00886 Ribosomal protein S16 JCR19_01640 PF01782 RimM N-terminal domain JCR19_01640 PF05239 PRC-barrel domain JCR19_01645 PF01746 tRNA (Guanine-1)-methyltransferase JCR19_01650 PF01245 Ribosomal protein L19 JCR19_01655 PF00561 alpha/beta hydrolase fold JCR19_01660 PF03280 Proteobacterial lipase chaperone protein JCR19_01665 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCR19_01665 PF09157 Pseudouridine synthase II TruB, C-terminal JCR19_01665 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCR19_01670 PF01925 Sulfite exporter TauE/SafE JCR19_01680 PF00892 EamA-like transporter family JCR19_01685 PF00892 EamA-like transporter family JCR19_01690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR19_01690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR19_01695 PF02913 FAD linked oxidases, C-terminal domain JCR19_01695 PF01565 FAD binding domain JCR19_01705 PF03992 Antibiotic biosynthesis monooxygenase JCR19_01710 PF02525 Flavodoxin-like fold JCR19_01720 PF07690 Major Facilitator Superfamily JCR19_01725 PF12805 FUSC-like inner membrane protein yccS JCR19_01730 PF00080 Copper/zinc superoxide dismutase (SODC) JCR19_01735 PF01594 AI-2E family transporter JCR19_01740 PF13614 AAA domain JCR19_01770 PF00324 Amino acid permease JCR19_01775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR19_01775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR19_01780 PF00202 Aminotransferase class-III JCR19_01785 PF04958 Arginine N-succinyltransferase beta subunit JCR19_01790 PF00171 Aldehyde dehydrogenase family JCR19_01795 PF04996 Succinylarginine dihydrolase JCR19_01800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JCR19_01815 PF00082 Subtilase family JCR19_01815 PF05922 Peptidase inhibitor I9 JCR19_01830 PF03466 LysR substrate binding domain JCR19_01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_01835 PF00892 EamA-like transporter family JCR19_01845 PF02092 Glycyl-tRNA synthetase beta subunit JCR19_01845 PF05746 DALR anticodon binding domain JCR19_01850 PF02091 Glycyl-tRNA synthetase alpha subunit JCR19_01875 PF00571 CBS domain JCR19_01880 PF04024 PspC domain JCR19_01890 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_01890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_01890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_01890 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR19_01900 PF08501 Shikimate dehydrogenase substrate binding domain JCR19_01900 PF01488 Shikimate / quinate 5-dehydrogenase JCR19_01900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCR19_01905 PF01218 Coproporphyrinogen III oxidase JCR19_01910 PF00925 GTP cyclohydrolase II JCR19_01915 PF02780 Transketolase, C-terminal domain JCR19_01915 PF02779 Transketolase, pyrimidine binding domain JCR19_01915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCR19_01920 PF00459 Inositol monophosphatase family JCR19_01925 PF12343 Cold shock protein DEAD box A JCR19_01925 PF00270 DEAD/DEAH box helicase JCR19_01925 PF00271 Helicase conserved C-terminal domain JCR19_01925 PF03880 DbpA RNA binding domain JCR19_01935 PF00005 ABC transporter JCR19_01940 PF02405 Permease MlaE JCR19_01950 PF05494 MlaC protein JCR19_01960 PF01544 CorA-like Mg2+ transporter protein JCR19_01965 PF03641 Possible lysine decarboxylase JCR19_01970 PF00293 NUDIX domain JCR19_01975 PF00156 Phosphoribosyl transferase domain JCR19_01980 PF17191 RecG wedge domain JCR19_01980 PF00271 Helicase conserved C-terminal domain JCR19_01980 PF00270 DEAD/DEAH box helicase JCR19_01995 PF01553 Acyltransferase JCR19_02005 PF00375 Sodium:dicarboxylate symporter family JCR19_02015 PF01926 50S ribosome-binding GTPase JCR19_02020 PF02082 Transcriptional regulator JCR19_02025 PF00042 Globin JCR19_02025 PF00970 Oxidoreductase FAD-binding domain JCR19_02025 PF00175 Oxidoreductase NAD-binding domain JCR19_02030 PF05872 Bacterial protein of unknown function (DUF853) JCR19_02035 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR19_02040 PF00117 Glutamine amidotransferase class-I JCR19_02045 PF00338 Ribosomal protein S10p/S20e JCR19_02050 PF00297 Ribosomal protein L3 JCR19_02055 PF00573 Ribosomal protein L4/L1 family JCR19_02060 PF00276 Ribosomal protein L23 JCR19_02065 PF03947 Ribosomal Proteins L2, C-terminal domain JCR19_02065 PF00181 Ribosomal Proteins L2, RNA binding domain JCR19_02070 PF00203 Ribosomal protein S19 JCR19_02075 PF00237 Ribosomal protein L22p/L17e JCR19_02080 PF07650 KH domain JCR19_02080 PF00189 Ribosomal protein S3, C-terminal domain JCR19_02085 PF00252 Ribosomal protein L16p/L10e JCR19_02090 PF00831 Ribosomal L29 protein JCR19_02095 PF00366 Ribosomal protein S17 JCR19_02100 PF00238 Ribosomal protein L14p/L23e JCR19_02105 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCR19_02105 PF00467 KOW motif JCR19_02110 PF00673 ribosomal L5P family C-terminus JCR19_02110 PF00281 Ribosomal protein L5 JCR19_02115 PF00253 Ribosomal protein S14p/S29e JCR19_02120 PF00410 Ribosomal protein S8 JCR19_02125 PF00347 Ribosomal protein L6 JCR19_02130 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCR19_02135 PF03719 Ribosomal protein S5, C-terminal domain JCR19_02135 PF00333 Ribosomal protein S5, N-terminal domain JCR19_02140 PF00327 Ribosomal protein L30p/L7e JCR19_02145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCR19_02150 PF00344 SecY translocase JCR19_02155 PF00444 Ribosomal protein L36 JCR19_02160 PF00416 Ribosomal protein S13/S18 JCR19_02165 PF00411 Ribosomal protein S11 JCR19_02170 PF01479 S4 domain JCR19_02170 PF00163 Ribosomal protein S4/S9 N-terminal domain JCR19_02175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCR19_02175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCR19_02175 PF01000 RNA polymerase Rpb3/RpoA insert domain JCR19_02180 PF01196 Ribosomal protein L17 JCR19_02185 PF00743 Flavin-binding monooxygenase-like JCR19_02190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_02190 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_02195 PF03937 Flavinator of succinate dehydrogenase JCR19_02225 PF09526 Probable metal-binding protein (DUF2387) JCR19_02230 PF01432 Peptidase family M3 JCR19_02235 PF08461 Ribonuclease R winged-helix domain JCR19_02235 PF08206 Ribonuclease B OB domain JCR19_02235 PF17876 Cold shock domain JCR19_02235 PF00575 S1 RNA binding domain JCR19_02235 PF00773 RNB domain JCR19_02280 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCR19_02285 PF12833 Helix-turn-helix domain JCR19_02290 PF00892 EamA-like transporter family JCR19_02295 PF03631 Virulence factor BrkB JCR19_02300 PF03358 NADPH-dependent FMN reductase JCR19_02325 PF02130 Uncharacterized protein family UPF0054 JCR19_02330 PF02562 PhoH-like protein JCR19_02335 PF00919 Uncharacterized protein family UPF0004 JCR19_02335 PF01938 TRAM domain JCR19_02335 PF04055 Radical SAM superfamily JCR19_02340 PF01551 Peptidase family M23 JCR19_02340 PF10145 Phage-related minor tail protein JCR19_02340 PF01464 Transglycosylase SLT domain JCR19_02350 PF00056 lactate/malate dehydrogenase, NAD binding domain JCR19_02350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCR19_02370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JCR19_02375 PF01066 CDP-alcohol phosphatidyltransferase JCR19_02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_02420 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_02425 PF00440 Bacterial regulatory proteins, tetR family JCR19_02425 PF17932 Tetracyclin repressor-like, C-terminal domain JCR19_02440 PF01039 Carboxyl transferase domain JCR19_02445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_02445 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_02445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_02455 PF00364 Biotin-requiring enzyme JCR19_02455 PF00289 Biotin carboxylase, N-terminal domain JCR19_02455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR19_02455 PF02785 Biotin carboxylase C-terminal domain JCR19_02465 PF04386 Stringent starvation protein B JCR19_02470 PF13417 Glutathione S-transferase, N-terminal domain JCR19_02470 PF00043 Glutathione S-transferase, C-terminal domain JCR19_02475 PF00380 Ribosomal protein S9/S16 JCR19_02480 PF00572 Ribosomal protein L13 JCR19_02485 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JCR19_02490 PF00398 Ribosomal RNA adenine dimethylase JCR19_02495 PF00149 Calcineurin-like phosphoesterase JCR19_02515 PF01926 50S ribosome-binding GTPase JCR19_02515 PF13167 GTP-binding GTPase N-terminal JCR19_02515 PF16360 GTP-binding GTPase Middle Region JCR19_02525 PF13091 PLD-like domain JCR19_02530 PF00149 Calcineurin-like phosphoesterase JCR19_02530 PF10518 TAT (twin-arginine translocation) pathway signal sequence JCR19_02535 PF00691 OmpA family JCR19_02535 PF01389 OmpA-like transmembrane domain JCR19_02540 PF00990 Diguanylate cyclase, GGDEF domain JCR19_02540 PF17152 Periplasmic sensor domain JCR19_02575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR19_02575 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_02585 PF00753 Metallo-beta-lactamase superfamily JCR19_02585 PF04273 Putative phosphatase (DUF442) JCR19_02590 PF00561 alpha/beta hydrolase fold JCR19_02595 PF00085 Thioredoxin JCR19_02600 PF03061 Thioesterase superfamily JCR19_02610 PF04461 Protein of unknown function (DUF520) JCR19_02620 PF01266 FAD dependent oxidoreductase JCR19_02620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR19_02630 PF03795 YCII-related domain JCR19_02635 PF04279 Intracellular septation protein A JCR19_02640 PF02811 PHP domain JCR19_02645 PF01062 Bestrophin, RFP-TM, chloride channel JCR19_02650 PF04002 RadC-like JAB domain JCR19_02655 PF04127 DNA / pantothenate metabolism flavoprotein JCR19_02655 PF02441 Flavoprotein JCR19_02660 PF02355 Protein export membrane protein JCR19_02660 PF07549 SecD/SecF GG Motif JCR19_02665 PF13721 SecD export protein N-terminal TM region JCR19_02665 PF07549 SecD/SecF GG Motif JCR19_02665 PF02355 Protein export membrane protein JCR19_02670 PF02699 Preprotein translocase subunit JCR19_02675 PF01702 Queuine tRNA-ribosyltransferase JCR19_02690 PF02547 Queuosine biosynthesis protein JCR19_02700 PF07689 KaiB domain JCR19_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_02700 PF00512 His Kinase A (phospho-acceptor) domain JCR19_02705 PF03710 Glutamate-ammonia ligase adenylyltransferase JCR19_02705 PF08335 GlnD PII-uridylyltransferase JCR19_02710 PF01063 Amino-transferase class IV JCR19_02725 PF01522 Polysaccharide deacetylase JCR19_02730 PF00535 Glycosyl transferase family 2 JCR19_02735 PF13439 Glycosyltransferase Family 4 JCR19_02735 PF00534 Glycosyl transferases group 1 JCR19_02760 PF17101 Stealth protein CR1, conserved region 1 JCR19_02760 PF17102 Stealth protein CR3, conserved region 3 JCR19_02760 PF11380 Stealth protein CR2, conserved region 2 JCR19_02765 PF00152 tRNA synthetases class II (D, K and N) JCR19_02765 PF01336 OB-fold nucleic acid binding domain JCR19_02765 PF02938 GAD domain JCR19_02775 PF07715 TonB-dependent Receptor Plug Domain JCR19_02775 PF00593 TonB dependent receptor JCR19_02795 PF06146 Phosphate-starvation-inducible E JCR19_02800 PF02798 Glutathione S-transferase, N-terminal domain JCR19_02800 PF00043 Glutathione S-transferase, C-terminal domain JCR19_02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_02805 PF03466 LysR substrate binding domain JCR19_02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_02810 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR19_02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_02815 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_02815 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR19_02815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_02815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_02825 PF00512 His Kinase A (phospho-acceptor) domain JCR19_02825 PF00672 HAMP domain JCR19_02830 PF00486 Transcriptional regulatory protein, C terminal JCR19_02830 PF00072 Response regulator receiver domain JCR19_02835 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JCR19_02855 PF01923 Cobalamin adenosyltransferase JCR19_02860 PF07715 TonB-dependent Receptor Plug Domain JCR19_02860 PF00593 TonB dependent receptor JCR19_02865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JCR19_02870 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_02895 PF00290 Tryptophan synthase alpha chain JCR19_02900 PF01039 Carboxyl transferase domain JCR19_02905 PF02875 Mur ligase family, glutamate ligase domain JCR19_02905 PF08245 Mur ligase middle domain JCR19_02920 PF00753 Metallo-beta-lactamase superfamily JCR19_02925 PF00578 AhpC/TSA family JCR19_02925 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR19_02930 PF07517 SecA DEAD-like domain JCR19_02930 PF01043 SecA preprotein cross-linking domain JCR19_02930 PF07516 SecA Wing and Scaffold domain JCR19_02930 PF02810 SEC-C motif JCR19_02940 PF00083 Sugar (and other) transporter JCR19_02940 PF07690 Major Facilitator Superfamily JCR19_02945 PF03006 Haemolysin-III related JCR19_02970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR19_02970 PF00378 Enoyl-CoA hydratase/isomerase JCR19_02970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR19_02975 PF02803 Thiolase, C-terminal domain JCR19_02975 PF00108 Thiolase, N-terminal domain JCR19_02980 PF12833 Helix-turn-helix domain JCR19_02980 PF02311 AraC-like ligand binding domain JCR19_02985 PF02515 CoA-transferase family III JCR19_02990 PF04966 Carbohydrate-selective porin, OprB family JCR19_02995 PF01011 PQQ enzyme repeat JCR19_03000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR19_03000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR19_03010 PF00893 Small Multidrug Resistance protein JCR19_03020 PF00108 Thiolase, N-terminal domain JCR19_03020 PF02803 Thiolase, C-terminal domain JCR19_03030 PF00691 OmpA family JCR19_03030 PF13505 Outer membrane protein beta-barrel domain JCR19_03040 PF01139 tRNA-splicing ligase RtcB JCR19_03045 PF00324 Amino acid permease JCR19_03050 PF08468 Methyltransferase small domain N-terminal JCR19_03050 PF05175 Methyltransferase small domain JCR19_03055 PF00860 Permease family JCR19_03060 PF00009 Elongation factor Tu GTP binding domain JCR19_03060 PF03144 Elongation factor Tu domain 2 JCR19_03060 PF00679 Elongation factor G C-terminus JCR19_03065 PF01741 Large-conductance mechanosensitive channel, MscL JCR19_03080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCR19_03080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCR19_03080 PF06827 Zinc finger found in FPG and IleRS JCR19_03085 PF02245 Methylpurine-DNA glycosylase (MPG) JCR19_03090 PF07715 TonB-dependent Receptor Plug Domain JCR19_03090 PF00593 TonB dependent receptor JCR19_03105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR19_03110 PF03547 Membrane transport protein JCR19_03120 PF10411 Disulfide bond isomerase protein N-terminus JCR19_03120 PF13098 Thioredoxin-like domain JCR19_03125 PF01571 Aminomethyltransferase folate-binding domain JCR19_03135 PF04343 Protein of unknown function, DUF488 JCR19_03140 PF03831 PhnA domain JCR19_03140 PF08274 PhnA Zinc-Ribbon JCR19_03145 PF07411 Domain of unknown function (DUF1508) JCR19_03150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR19_03150 PF03129 Anticodon binding domain JCR19_03150 PF04073 Aminoacyl-tRNA editing domain JCR19_03155 PF00873 AcrB/AcrD/AcrF family JCR19_03170 PF00072 Response regulator receiver domain JCR19_03175 PF00072 Response regulator receiver domain JCR19_03180 PF01584 CheW-like domain JCR19_03185 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JCR19_03185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCR19_03190 PF01584 CheW-like domain JCR19_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_03190 PF01627 Hpt domain JCR19_03190 PF00072 Response regulator receiver domain JCR19_03200 PF07687 Peptidase dimerisation domain JCR19_03200 PF01546 Peptidase family M20/M25/M40 JCR19_03205 PF08085 Entericidin EcnA/B family JCR19_03215 PF04304 Protein of unknown function (DUF454) JCR19_03220 PF17969 L,D-transpeptidase C-terminal domain JCR19_03220 PF03734 L,D-transpeptidase catalytic domain JCR19_03260 PF00175 Oxidoreductase NAD-binding domain JCR19_03260 PF00258 Flavodoxin JCR19_03260 PF00667 FAD binding domain JCR19_03270 PF12805 FUSC-like inner membrane protein yccS JCR19_03275 PF07690 Major Facilitator Superfamily JCR19_03280 PF00881 Nitroreductase family JCR19_03295 PF01235 Sodium:alanine symporter family JCR19_03300 PF01734 Patatin-like phospholipase JCR19_03305 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_03305 PF13291 ACT domain JCR19_03310 PF05992 SbmA/BacA-like family JCR19_03340 PF02934 GatB/GatE catalytic domain JCR19_03340 PF02637 GatB domain JCR19_03345 PF01425 Amidase JCR19_03350 PF02686 Glu-tRNAGln amidotransferase C subunit JCR19_03360 PF04085 rod shape-determining protein MreC JCR19_03365 PF04093 rod shape-determining protein MreD JCR19_03370 PF02545 Maf-like protein JCR19_03375 PF10150 Ribonuclease E/G family JCR19_03375 PF00575 S1 RNA binding domain JCR19_03385 PF06974 Protein of unknown function (DUF1298) JCR19_03385 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JCR19_03390 PF01507 Phosphoadenosine phosphosulfate reductase family JCR19_03405 PF02525 Flavodoxin-like fold JCR19_03425 PF02673 Bacitracin resistance protein BacA JCR19_03430 PF12833 Helix-turn-helix domain JCR19_03430 PF06719 AraC-type transcriptional regulator N-terminus JCR19_03435 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_03435 PF08659 KR domain JCR19_03435 PF14765 Polyketide synthase dehydratase JCR19_03435 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_03435 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_03435 PF00698 Acyl transferase domain JCR19_03435 PF16197 Ketoacyl-synthetase C-terminal extension JCR19_03435 PF00550 Phosphopantetheine attachment site JCR19_03435 PF08990 Erythronolide synthase docking JCR19_03435 PF09277 Erythronolide synthase, docking JCR19_03440 PF01965 DJ-1/PfpI family JCR19_03450 PF00324 Amino acid permease JCR19_03455 PF04303 PrpF protein JCR19_03460 PF00348 Polyprenyl synthetase JCR19_03465 PF04237 YjbR JCR19_03470 PF01145 SPFH domain / Band 7 family JCR19_03480 PF01734 Patatin-like phospholipase JCR19_03505 PF13737 Transposase DDE domain JCR19_03520 PF08264 Anticodon-binding domain of tRNA JCR19_03520 PF00133 tRNA synthetases class I (I, L, M and V) JCR19_03520 PF10458 Valyl tRNA synthetase tRNA binding arm JCR19_03540 PF01906 Putative heavy-metal-binding JCR19_03545 PF01906 Putative heavy-metal-binding JCR19_03550 PF02321 Outer membrane efflux protein JCR19_03555 PF00873 AcrB/AcrD/AcrF family JCR19_03560 PF00529 HlyD membrane-fusion protein of T1SS JCR19_03560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_03565 PF01569 PAP2 superfamily JCR19_03575 PF00348 Polyprenyl synthetase JCR19_03585 PF00829 Ribosomal prokaryotic L21 protein JCR19_03590 PF01016 Ribosomal L27 protein JCR19_03595 PF03548 Outer membrane lipoprotein carrier protein LolA JCR19_03605 PF02403 Seryl-tRNA synthetase N-terminal domain JCR19_03605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR19_03610 PF14824 Sirohaem biosynthesis protein central JCR19_03610 PF10414 Sirohaem synthase dimerisation region JCR19_03610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR19_03615 PF00588 SpoU rRNA Methylase family JCR19_03620 PF01638 HxlR-like helix-turn-helix JCR19_03625 PF03358 NADPH-dependent FMN reductase JCR19_03630 PF13520 Amino acid permease JCR19_03635 PF00465 Iron-containing alcohol dehydrogenase JCR19_03645 PF03099 Biotin/lipoate A/B protein ligase family JCR19_03650 PF04359 Protein of unknown function (DUF493) JCR19_03655 PF04545 Sigma-70, region 4 JCR19_03655 PF04546 Sigma-70, non-essential region JCR19_03655 PF03979 Sigma-70 factor, region 1.1 JCR19_03655 PF00140 Sigma-70 factor, region 1.2 JCR19_03655 PF04542 Sigma-70 region 2 JCR19_03655 PF04539 Sigma-70 region 3 JCR19_03675 PF17773 UPF0176 acylphosphatase like domain JCR19_03675 PF00581 Rhodanese-like domain JCR19_03685 PF00285 Citrate synthase, C-terminal domain JCR19_03690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR19_03695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR19_03700 PF02910 Fumarate reductase flavoprotein C-term JCR19_03700 PF00890 FAD binding domain JCR19_03705 PF13085 2Fe-2S iron-sulfur cluster binding domain JCR19_03720 PF16078 2-oxoglutarate dehydrogenase N-terminus JCR19_03720 PF00676 Dehydrogenase E1 component JCR19_03720 PF16870 2-oxoglutarate dehydrogenase C-terminal JCR19_03720 PF02779 Transketolase, pyrimidine binding domain JCR19_03725 PF02817 e3 binding domain JCR19_03725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR19_03725 PF00364 Biotin-requiring enzyme JCR19_03730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_03730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR19_03735 PF00549 CoA-ligase JCR19_03735 PF08442 ATP-grasp domain JCR19_03740 PF02629 CoA binding domain JCR19_03740 PF00549 CoA-ligase JCR19_03745 PF00579 tRNA synthetases class I (W and Y) JCR19_03750 PF05661 Protein of unknown function (DUF808) JCR19_03755 PF04228 Putative neutral zinc metallopeptidase JCR19_03760 PF00999 Sodium/hydrogen exchanger family JCR19_03795 PF09587 Bacterial capsule synthesis protein PGA_cap JCR19_03805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR19_03810 PF00582 Universal stress protein family JCR19_03815 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_03820 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR19_03820 PF03449 Transcription elongation factor, N-terminal JCR19_03825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR19_03825 PF02142 MGS-like domain JCR19_03825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCR19_03830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCR19_03830 PF00117 Glutamine amidotransferase class-I JCR19_03845 PF01985 CRS1 / YhbY (CRM) domain JCR19_03850 PF01728 FtsJ-like methyltransferase JCR19_03855 PF00004 ATPase family associated with various cellular activities (AAA) JCR19_03855 PF17862 AAA+ lid domain JCR19_03855 PF06480 FtsH Extracellular JCR19_03855 PF01434 Peptidase family M41 JCR19_03860 PF00809 Pterin binding enzyme JCR19_03880 PF09423 PhoD-like phosphatase JCR19_03880 PF16655 PhoD-like phosphatase, N-terminal domain JCR19_03895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCR19_03895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCR19_03910 PF00083 Sugar (and other) transporter JCR19_03915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCR19_03915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCR19_03920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCR19_03920 PF01266 FAD dependent oxidoreductase JCR19_03925 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JCR19_03925 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JCR19_03930 PF00781 Diacylglycerol kinase catalytic domain JCR19_03935 PF00149 Calcineurin-like phosphoesterase JCR19_03945 PF00166 Chaperonin 10 Kd subunit JCR19_03950 PF00118 TCP-1/cpn60 chaperonin family JCR19_03955 PF01219 Prokaryotic diacylglycerol kinase JCR19_03965 PF03009 Glycerophosphoryl diester phosphodiesterase family JCR19_03970 PF00873 AcrB/AcrD/AcrF family JCR19_03980 PF01435 Peptidase family M48 JCR19_03985 PF01464 Transglycosylase SLT domain JCR19_03990 PF01171 PP-loop family JCR19_04000 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR19_04000 PF01464 Transglycosylase SLT domain JCR19_04005 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR19_04005 PF03449 Transcription elongation factor, N-terminal JCR19_04020 PF00501 AMP-binding enzyme JCR19_04020 PF13193 AMP-binding enzyme C-terminal domain JCR19_04020 PF00668 Condensation domain JCR19_04020 PF00975 Thioesterase domain JCR19_04020 PF00550 Phosphopantetheine attachment site JCR19_04070 PF00216 Bacterial DNA-binding protein JCR19_04095 PF13401 AAA domain JCR19_04095 PF01471 Putative peptidoglycan binding domain JCR19_04125 PF10502 Signal peptidase, peptidase S26 JCR19_04160 PF03237 Terminase-like family JCR19_04175 PF06074 Protein of unknown function (DUF935) JCR19_04180 PF04233 Phage Mu protein F like protein JCR19_04185 PF05069 Phage virion morphogenesis family JCR19_04200 PF10124 Mu-like prophage major head subunit gpT JCR19_04295 PF00881 Nitroreductase family JCR19_04310 PF02595 Glycerate kinase family JCR19_04315 PF00384 Molybdopterin oxidoreductase JCR19_04320 PF02634 FdhD/NarQ family JCR19_04325 PF06803 Protein of unknown function (DUF1232) JCR19_04330 PF11890 Domain of unknown function (DUF3410) JCR19_04330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR19_04330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR19_04335 PF00152 tRNA synthetases class II (D, K and N) JCR19_04345 PF18073 Rubredoxin metal binding domain JCR19_04350 PF00324 Amino acid permease JCR19_04360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCR19_04360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCR19_04365 PF01678 Diaminopimelate epimerase JCR19_04370 PF01810 LysE type translocator JCR19_04375 PF02899 Phage integrase, N-terminal SAM-like domain JCR19_04375 PF00589 Phage integrase family JCR19_04380 PF01012 Electron transfer flavoprotein domain JCR19_04385 PF01012 Electron transfer flavoprotein domain JCR19_04385 PF00766 Electron transfer flavoprotein FAD-binding domain JCR19_04390 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR19_04390 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR19_04405 PF00535 Glycosyl transferase family 2 JCR19_04425 PF13533 Biotin-lipoyl like JCR19_04435 PF00266 Aminotransferase class-V JCR19_04450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCR19_04460 PF12704 MacB-like periplasmic core domain JCR19_04460 PF02687 FtsX-like permease family JCR19_04465 PF00005 ABC transporter JCR19_04470 PF00753 Metallo-beta-lactamase superfamily JCR19_04470 PF03772 Competence protein JCR19_04470 PF13567 Domain of unknown function (DUF4131) JCR19_04480 PF01343 Peptidase family S49 JCR19_04480 PF06965 Na+/H+ antiporter 1 JCR19_04485 PF12697 Alpha/beta hydrolase family JCR19_04490 PF00551 Formyl transferase JCR19_04495 PF00586 AIR synthase related protein, N-terminal domain JCR19_04495 PF02769 AIR synthase related protein, C-terminal domain JCR19_04500 PF01594 AI-2E family transporter JCR19_04505 PF11638 DnaA N-terminal domain JCR19_04505 PF08299 Bacterial dnaA protein helix-turn-helix JCR19_04505 PF00308 Bacterial dnaA protein JCR19_04540 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR19_04540 PF00588 SpoU rRNA Methylase family JCR19_04545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JCR19_04555 PF00691 OmpA family JCR19_04560 PF07676 WD40-like Beta Propeller Repeat JCR19_04560 PF04052 TolB amino-terminal domain JCR19_04570 PF02472 Biopolymer transport protein ExbD/TolR JCR19_04575 PF01618 MotA/TolQ/ExbB proton channel family JCR19_04580 PF03061 Thioesterase superfamily JCR19_04585 PF01546 Peptidase family M20/M25/M40 JCR19_04585 PF07687 Peptidase dimerisation domain JCR19_04590 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCR19_04590 PF05491 RuvB C-terminal winged helix domain JCR19_04590 PF17864 RuvB AAA lid domain JCR19_04595 PF01330 RuvA N terminal domain JCR19_04595 PF07499 RuvA, C-terminal domain JCR19_04600 PF01966 HD domain JCR19_04605 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JCR19_04605 PF02769 AIR synthase related protein, C-terminal domain JCR19_04605 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCR19_04610 PF07690 Major Facilitator Superfamily JCR19_04615 PF01784 NIF3 (NGG1p interacting factor 3) JCR19_04620 PF00378 Enoyl-CoA hydratase/isomerase JCR19_04625 PF00293 NUDIX domain JCR19_04625 PF01467 Cytidylyltransferase-like JCR19_04635 PF00578 AhpC/TSA family JCR19_04650 PF06508 Queuosine biosynthesis protein QueC JCR19_04660 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JCR19_04660 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_04660 PF14602 Hexapeptide repeat of succinyl-transferase JCR19_04670 PF03466 LysR substrate binding domain JCR19_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_04675 PF00005 ABC transporter JCR19_04675 PF12857 TOBE-like domain JCR19_04680 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_04685 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_04700 PF01063 Amino-transferase class IV JCR19_04705 PF02618 YceG-like family JCR19_04710 PF02223 Thymidylate kinase JCR19_04720 PF02910 Fumarate reductase flavoprotein C-term JCR19_04720 PF00890 FAD binding domain JCR19_04725 PF13180 PDZ domain JCR19_04735 PF06421 GTP-binding protein LepA C-terminus JCR19_04735 PF03144 Elongation factor Tu domain 2 JCR19_04735 PF00679 Elongation factor G C-terminus JCR19_04735 PF00009 Elongation factor Tu GTP binding domain JCR19_04740 PF10502 Signal peptidase, peptidase S26 JCR19_04750 PF00035 Double-stranded RNA binding motif JCR19_04750 PF14622 Ribonuclease-III-like JCR19_04755 PF07650 KH domain JCR19_04755 PF01926 50S ribosome-binding GTPase JCR19_04765 PF02565 Recombination protein O C terminal JCR19_04765 PF11967 Recombination protein O N terminal JCR19_04770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JCR19_04775 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JCR19_04780 PF00106 short chain dehydrogenase JCR19_04815 PF00155 Aminotransferase class I and II JCR19_04825 PF00990 Diguanylate cyclase, GGDEF domain JCR19_04825 PF17151 Periplasmic sensor domain JCR19_04835 PF12344 Ultra-violet resistance protein B JCR19_04835 PF00271 Helicase conserved C-terminal domain JCR19_04835 PF02151 UvrB/uvrC motif JCR19_04835 PF04851 Type III restriction enzyme, res subunit JCR19_04835 PF17757 UvrB interaction domain JCR19_04845 PF00892 EamA-like transporter family JCR19_04850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR19_04850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR19_04865 PF01926 50S ribosome-binding GTPase JCR19_04865 PF01018 GTP1/OBG JCR19_04870 PF01472 PUA domain JCR19_04870 PF00696 Amino acid kinase family JCR19_04880 PF07759 Protein of unknown function (DUF1615) JCR19_04885 PF01207 Dihydrouridine synthase (Dus) JCR19_04890 PF03060 Nitronate monooxygenase JCR19_04905 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR19_04935 PF00875 DNA photolyase JCR19_04935 PF03441 FAD binding domain of DNA photolyase JCR19_04940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR19_04945 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_04950 PF07943 Penicillin-binding protein 5, C-terminal domain JCR19_04950 PF00768 D-alanyl-D-alanine carboxypeptidase JCR19_04960 PF03971 Monomeric isocitrate dehydrogenase JCR19_04965 PF00849 RNA pseudouridylate synthase JCR19_04970 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR19_04990 PF06779 Uncharacterised MFS-type transporter YbfB JCR19_04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_04995 PF03466 LysR substrate binding domain JCR19_05000 PF00375 Sodium:dicarboxylate symporter family JCR19_05005 PF02567 Phenazine biosynthesis-like protein JCR19_05010 PF05193 Peptidase M16 inactive domain JCR19_05010 PF00675 Insulinase (Peptidase family M16) JCR19_05035 PF02581 Thiamine monophosphate synthase JCR19_05040 PF00202 Aminotransferase class-III JCR19_05050 PF00849 RNA pseudouridylate synthase JCR19_05055 PF18337 RapA N-terminal Tudor like domain JCR19_05055 PF18339 RapA N-terminal Tudor like domain 1 JCR19_05055 PF00271 Helicase conserved C-terminal domain JCR19_05055 PF12137 RNA polymerase recycling family C-terminal JCR19_05055 PF00176 SNF2 family N-terminal domain JCR19_05065 PF00440 Bacterial regulatory proteins, tetR family JCR19_05070 PF00970 Oxidoreductase FAD-binding domain JCR19_05070 PF00175 Oxidoreductase NAD-binding domain JCR19_05070 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_05075 PF00487 Fatty acid desaturase JCR19_05085 PF17754 MftR C-terminal domain JCR19_05085 PF00440 Bacterial regulatory proteins, tetR family JCR19_05095 PF00202 Aminotransferase class-III JCR19_05100 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR19_05105 PF00171 Aldehyde dehydrogenase family JCR19_05110 PF01037 Lrp/AsnC ligand binding domain JCR19_05115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR19_05115 PF00205 Thiamine pyrophosphate enzyme, central domain JCR19_05115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR19_05120 PF00324 Amino acid permease JCR19_05125 PF12849 PBP superfamily domain JCR19_05130 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_05135 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_05140 PF00005 ABC transporter JCR19_05145 PF01343 Peptidase family S49 JCR19_05145 PF08496 Peptidase family S49 N-terminal JCR19_05160 PF08328 Adenylosuccinate lyase C-terminal JCR19_05160 PF00206 Lyase JCR19_05165 PF04356 Protein of unknown function (DUF489) JCR19_05175 PF13344 Haloacid dehalogenase-like hydrolase JCR19_05175 PF00293 NUDIX domain JCR19_05180 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_05185 PF07943 Penicillin-binding protein 5, C-terminal domain JCR19_05185 PF00768 D-alanyl-D-alanine carboxypeptidase JCR19_05200 PF01975 Survival protein SurE JCR19_05205 PF01476 LysM domain JCR19_05205 PF01551 Peptidase family M23 JCR19_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_05210 PF03466 LysR substrate binding domain JCR19_05215 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR19_05215 PF13654 AAA domain JCR19_05220 PF07690 Major Facilitator Superfamily JCR19_05225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR19_05230 PF13593 SBF-like CPA transporter family (DUF4137) JCR19_05235 PF01197 Ribosomal protein L31 JCR19_05250 PF04055 Radical SAM superfamily JCR19_05255 PF09285 Elongation factor P, C-terminal JCR19_05255 PF08207 Elongation factor P (EF-P) KOW-like domain JCR19_05255 PF01132 Elongation factor P (EF-P) OB domain JCR19_05260 PF02554 Carbon starvation protein CstA JCR19_05260 PF13722 5TM C-terminal transporter carbon starvation CstA JCR19_05265 PF04328 Selenoprotein, putative JCR19_05295 PF13556 PucR C-terminal helix-turn-helix domain JCR19_05295 PF17853 GGDEF-like domain JCR19_05295 PF06018 CodY GAF-like domain JCR19_05310 PF00171 Aldehyde dehydrogenase family JCR19_05315 PF00324 Amino acid permease JCR19_05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_05320 PF03466 LysR substrate binding domain JCR19_05325 PF02028 BCCT, betaine/carnitine/choline family transporter JCR19_05330 PF02028 BCCT, betaine/carnitine/choline family transporter JCR19_05335 PF00355 Rieske [2Fe-2S] domain JCR19_05335 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR19_05340 PF00171 Aldehyde dehydrogenase family JCR19_05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_05345 PF18113 Rubredoxin binding C-terminal domain JCR19_05350 PF01266 FAD dependent oxidoreductase JCR19_05350 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR19_05370 PF00892 EamA-like transporter family JCR19_05380 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JCR19_05385 PF00083 Sugar (and other) transporter JCR19_05390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR19_05390 PF13378 Enolase C-terminal domain-like JCR19_05395 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_05395 PF08659 KR domain JCR19_05395 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_05395 PF16197 Ketoacyl-synthetase C-terminal extension JCR19_05395 PF00550 Phosphopantetheine attachment site JCR19_05395 PF14765 Polyketide synthase dehydratase JCR19_05395 PF09277 Erythronolide synthase, docking JCR19_05395 PF08990 Erythronolide synthase docking JCR19_05395 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_05395 PF00698 Acyl transferase domain JCR19_05400 PF00440 Bacterial regulatory proteins, tetR family JCR19_05420 PF17954 Quercetinase C-terminal cupin domain JCR19_05420 PF02678 Pirin JCR19_05430 PF08348 YheO-like PAS domain JCR19_05430 PF13309 HTH domain JCR19_05440 PF00550 Phosphopantetheine attachment site JCR19_05440 PF00668 Condensation domain JCR19_05440 PF13193 AMP-binding enzyme C-terminal domain JCR19_05440 PF00501 AMP-binding enzyme JCR19_05445 PF13193 AMP-binding enzyme C-terminal domain JCR19_05445 PF00501 AMP-binding enzyme JCR19_05445 PF00668 Condensation domain JCR19_05445 PF00975 Thioesterase domain JCR19_05445 PF00550 Phosphopantetheine attachment site JCR19_05450 PF01032 FecCD transport family JCR19_05455 PF01032 FecCD transport family JCR19_05460 PF00005 ABC transporter JCR19_05465 PF01497 Periplasmic binding protein JCR19_05470 PF07715 TonB-dependent Receptor Plug Domain JCR19_05470 PF00593 TonB dependent receptor JCR19_05475 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR19_05480 PF00668 Condensation domain JCR19_05480 PF00550 Phosphopantetheine attachment site JCR19_05480 PF00501 AMP-binding enzyme JCR19_05485 PF00501 AMP-binding enzyme JCR19_05485 PF13193 AMP-binding enzyme C-terminal domain JCR19_05490 PF00550 Phosphopantetheine attachment site JCR19_05490 PF00857 Isochorismatase family JCR19_05495 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR19_05505 PF00005 ABC transporter JCR19_05510 PF00005 ABC transporter JCR19_05535 PF00425 chorismate binding enzyme JCR19_05545 PF01208 Uroporphyrinogen decarboxylase (URO-D) JCR19_05550 PF05675 Protein of unknown function (DUF817) JCR19_05565 PF00144 Beta-lactamase JCR19_05575 PF01227 GTP cyclohydrolase I JCR19_05580 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_05580 PF01799 [2Fe-2S] binding domain JCR19_05585 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JCR19_05585 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JCR19_05600 PF00218 Indole-3-glycerol phosphate synthase JCR19_05605 PF00591 Glycosyl transferase family, a/b domain JCR19_05605 PF02885 Glycosyl transferase family, helical bundle domain JCR19_05610 PF07715 TonB-dependent Receptor Plug Domain JCR19_05610 PF00593 TonB dependent receptor JCR19_05615 PF01433 Peptidase family M1 domain JCR19_05615 PF11838 ERAP1-like C-terminal domain JCR19_05620 PF00117 Glutamine amidotransferase class-I JCR19_05710 PF01555 DNA methylase JCR19_05740 PF01555 DNA methylase JCR19_06085 PF12161 HsdM N-terminal domain JCR19_06085 PF02384 N-6 DNA Methylase JCR19_06300 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JCR19_06355 PF00589 Phage integrase family JCR19_06355 PF13356 Arm DNA-binding domain JCR19_06365 PF00854 POT family JCR19_06370 PF00120 Glutamine synthetase, catalytic domain JCR19_06370 PF03951 Glutamine synthetase, beta-Grasp domain JCR19_06375 PF04345 Chorismate lyase JCR19_06380 PF01040 UbiA prenyltransferase family JCR19_06415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCR19_06415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCR19_06420 PF01784 NIF3 (NGG1p interacting factor 3) JCR19_06425 PF13180 PDZ domain JCR19_06430 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR19_06430 PF01743 Poly A polymerase head domain JCR19_06435 PF00390 Malic enzyme, N-terminal domain JCR19_06435 PF03949 Malic enzyme, NAD binding domain JCR19_06435 PF01515 Phosphate acetyl/butaryl transferase JCR19_06440 PF00563 EAL domain JCR19_06440 PF03707 Bacterial signalling protein N terminal repeat JCR19_06440 PF00990 Diguanylate cyclase, GGDEF domain JCR19_06445 PF04452 RNA methyltransferase JCR19_06450 PF02219 Methylenetetrahydrofolate reductase JCR19_06455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JCR19_06455 PF05221 S-adenosyl-L-homocysteine hydrolase JCR19_06470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_06470 PF09317 Domain of unknown function (DUF1974) JCR19_06470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_06475 PF04055 Radical SAM superfamily JCR19_06480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR19_06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_06490 PF07690 Major Facilitator Superfamily JCR19_06500 PF00557 Metallopeptidase family M24 JCR19_06505 PF00318 Ribosomal protein S2 JCR19_06510 PF00889 Elongation factor TS JCR19_06520 PF12833 Helix-turn-helix domain JCR19_06540 PF05036 Sporulation related domain JCR19_06540 PF03330 Lytic transglycolase JCR19_06545 PF13406 Transglycosylase SLT domain JCR19_06550 PF01098 Cell cycle protein JCR19_06560 PF14489 QueF-like protein JCR19_06560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JCR19_06565 PF01061 ABC-2 type transporter JCR19_06570 PF00005 ABC transporter JCR19_06600 PF00464 Serine hydroxymethyltransferase JCR19_06605 PF02321 Outer membrane efflux protein JCR19_06610 PF00873 AcrB/AcrD/AcrF family JCR19_06615 PF13533 Biotin-lipoyl like JCR19_06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_06620 PF03466 LysR substrate binding domain JCR19_06625 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR19_06630 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_06635 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_06640 PF00005 ABC transporter JCR19_06645 PF00893 Small Multidrug Resistance protein JCR19_06650 PF00037 4Fe-4S binding domain JCR19_06655 PF16325 Peptidase family U32 C-terminal domain JCR19_06655 PF01136 Peptidase family U32 JCR19_06660 PF00155 Aminotransferase class I and II JCR19_06660 PF00392 Bacterial regulatory proteins, gntR family JCR19_06665 PF02567 Phenazine biosynthesis-like protein JCR19_06670 PF00175 Oxidoreductase NAD-binding domain JCR19_06670 PF00970 Oxidoreductase FAD-binding domain JCR19_06675 PF01980 tRNA-methyltransferase O JCR19_06675 PF18389 TrmO C-terminal domain JCR19_06685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR19_06685 PF00437 Type II/IV secretion system protein JCR19_06695 PF00486 Transcriptional regulatory protein, C terminal JCR19_06695 PF00072 Response regulator receiver domain JCR19_06700 PF00512 His Kinase A (phospho-acceptor) domain JCR19_06700 PF08521 Two-component sensor kinase N-terminal JCR19_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_06710 PF00293 NUDIX domain JCR19_06720 PF14814 Bifunctional transglycosylase second domain JCR19_06720 PF00905 Penicillin binding protein transpeptidase domain JCR19_06720 PF00912 Transglycosylase JCR19_06725 PF01513 ATP-NAD kinase JCR19_06730 PF07023 Protein of unknown function (DUF1315) JCR19_06735 PF02885 Glycosyl transferase family, helical bundle domain JCR19_06735 PF00591 Glycosyl transferase family, a/b domain JCR19_06740 PF00375 Sodium:dicarboxylate symporter family JCR19_06745 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_06745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_06745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_06750 PF00756 Putative esterase JCR19_06755 PF01842 ACT domain JCR19_06755 PF01817 Chorismate mutase type II JCR19_06755 PF00800 Prephenate dehydratase JCR19_06760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR19_06770 PF01546 Peptidase family M20/M25/M40 JCR19_06770 PF07687 Peptidase dimerisation domain JCR19_06775 PF12706 Beta-lactamase superfamily domain JCR19_06785 PF03883 Peroxide stress protein YaaA JCR19_06795 PF05690 Thiazole biosynthesis protein ThiG JCR19_06805 PF04241 Protein of unknown function (DUF423) JCR19_06810 PF04545 Sigma-70, region 4 JCR19_06810 PF00140 Sigma-70 factor, region 1.2 JCR19_06810 PF04542 Sigma-70 region 2 JCR19_06820 PF00313 'Cold-shock' DNA-binding domain JCR19_06825 PF00271 Helicase conserved C-terminal domain JCR19_06825 PF00270 DEAD/DEAH box helicase JCR19_06835 PF00881 Nitroreductase family JCR19_06840 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCR19_06840 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCR19_06860 PF01180 Dihydroorotate dehydrogenase JCR19_06865 PF02674 Colicin V production protein JCR19_06870 PF00156 Phosphoribosyl transferase domain JCR19_06885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR19_06885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR19_06890 PF01435 Peptidase family M48 JCR19_06895 PF09424 Yqey-like protein JCR19_06900 PF01165 Ribosomal protein S21 JCR19_06905 PF00814 Glycoprotease family JCR19_06925 PF00069 Protein kinase domain JCR19_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_06950 PF03466 LysR substrate binding domain JCR19_06955 PF00202 Aminotransferase class-III JCR19_06960 PF00171 Aldehyde dehydrogenase family JCR19_06965 PF00324 Amino acid permease JCR19_06995 PF04076 Bacterial OB fold (BOF) protein JCR19_07020 PF00561 alpha/beta hydrolase fold JCR19_07025 PF03616 Sodium/glutamate symporter JCR19_07035 PF07729 FCD domain JCR19_07035 PF00392 Bacterial regulatory proteins, gntR family JCR19_07085 PF00083 Sugar (and other) transporter JCR19_07085 PF08946 Osmosensory transporter coiled coil JCR19_07105 PF00155 Aminotransferase class I and II JCR19_07110 PF02080 TrkA-C domain JCR19_07110 PF06826 Predicted Permease Membrane Region JCR19_07120 PF04403 Paraquat-inducible protein A JCR19_07125 PF02470 MlaD protein JCR19_07135 PF01177 Asp/Glu/Hydantoin racemase JCR19_07145 PF07995 Glucose / Sorbosone dehydrogenase JCR19_07155 PF13610 DDE domain JCR19_07170 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_07175 PF01909 Nucleotidyltransferase domain JCR19_07175 PF13427 Domain of unknown function (DUF4111) JCR19_07180 PF00893 Small Multidrug Resistance protein JCR19_07185 PF00809 Pterin binding enzyme JCR19_07200 PF07091 Ribosomal RNA methyltransferase (FmrO) JCR19_07220 PF00005 ABC transporter JCR19_07220 PF12848 ABC transporter JCR19_07225 PF01636 Phosphotransferase enzyme family JCR19_07235 PF13007 Transposase C of IS166 homeodomain JCR19_07235 PF13817 IS66 C-terminal element JCR19_07235 PF03050 Transposase IS66 family JCR19_07235 PF13005 zinc-finger binding domain of transposase IS66 JCR19_07240 PF13610 DDE domain JCR19_07250 PF13610 DDE domain JCR19_07265 PF13610 DDE domain JCR19_07280 PF00753 Metallo-beta-lactamase superfamily JCR19_07280 PF16123 Hydroxyacylglutathione hydrolase C-terminus JCR19_07285 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_07290 PF00005 ABC transporter JCR19_07290 PF09383 NIL domain JCR19_07295 PF03180 NLPA lipoprotein JCR19_07300 PF02844 Phosphoribosylglycinamide synthetase, N domain JCR19_07300 PF02843 Phosphoribosylglycinamide synthetase, C domain JCR19_07300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCR19_07305 PF01808 AICARFT/IMPCHase bienzyme JCR19_07305 PF02142 MGS-like domain JCR19_07310 PF02954 Bacterial regulatory protein, Fis family JCR19_07330 PF13932 GidA associated domain JCR19_07330 PF01134 Glucose inhibited division protein A JCR19_07340 PF14403 Circularly permuted ATP-grasp type 2 JCR19_07350 PF01841 Transglutaminase-like superfamily JCR19_07350 PF08379 Bacterial transglutaminase-like N-terminal region JCR19_07360 PF00842 Alanine racemase, C-terminal domain JCR19_07360 PF01168 Alanine racemase, N-terminal domain JCR19_07365 PF00772 DnaB-like helicase N terminal domain JCR19_07365 PF03796 DnaB-like helicase C terminal domain JCR19_07370 PF01281 Ribosomal protein L9, N-terminal domain JCR19_07370 PF03948 Ribosomal protein L9, C-terminal domain JCR19_07375 PF01084 Ribosomal protein S18 JCR19_07380 PF01250 Ribosomal protein S6 JCR19_07385 PF01040 UbiA prenyltransferase family JCR19_07390 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JCR19_07395 PF00510 Cytochrome c oxidase subunit III JCR19_07400 PF00115 Cytochrome C and Quinol oxidase polypeptide I JCR19_07405 PF06481 COX Aromatic Rich Motif JCR19_07405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JCR19_07415 PF02896 PEP-utilising enzyme, TIM barrel domain JCR19_07415 PF00391 PEP-utilising enzyme, mobile domain JCR19_07415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCR19_07420 PF03618 Kinase/pyrophosphorylase JCR19_07430 PF14883 Hypothetical glycosyl hydrolase family 13 JCR19_07430 PF01522 Polysaccharide deacetylase JCR19_07435 PF00535 Glycosyl transferase family 2 JCR19_07450 PF00296 Luciferase-like monooxygenase JCR19_07465 PF03466 LysR substrate binding domain JCR19_07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_07475 PF00472 RF-1 domain JCR19_07475 PF03462 PCRF domain JCR19_07480 PF17827 PrmC N-terminal domain JCR19_07480 PF13847 Methyltransferase domain JCR19_07485 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_07490 PF09084 NMT1/THI5 like JCR19_07495 PF12833 Helix-turn-helix domain JCR19_07500 PF00106 short chain dehydrogenase JCR19_07505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_07505 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_07505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_07510 PF00501 AMP-binding enzyme JCR19_07510 PF13193 AMP-binding enzyme C-terminal domain JCR19_07515 PF01613 Flavin reductase like domain JCR19_07520 PF00899 ThiF family JCR19_07525 PF03109 ABC1 family JCR19_07540 PF03814 Potassium-transporting ATPase A subunit JCR19_07550 PF02669 K+-transporting ATPase, c chain JCR19_07555 PF02702 Osmosensitive K+ channel His kinase sensor domain JCR19_07555 PF13493 Domain of unknown function (DUF4118) JCR19_07555 PF00512 His Kinase A (phospho-acceptor) domain JCR19_07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_07560 PF00072 Response regulator receiver domain JCR19_07560 PF00486 Transcriptional regulatory protein, C terminal JCR19_07565 PF00120 Glutamine synthetase, catalytic domain JCR19_07575 PF03232 Ubiquinone biosynthesis protein COQ7 JCR19_07580 PF07690 Major Facilitator Superfamily JCR19_07585 PF17243 POTRA domain TamA domain 1 JCR19_07585 PF07244 Surface antigen variable number repeat JCR19_07585 PF01103 Surface antigen JCR19_07600 PF06434 Aconitate hydratase 2 N-terminus JCR19_07600 PF00330 Aconitase family (aconitate hydratase) JCR19_07600 PF11791 Aconitate B N-terminal domain JCR19_07610 PF00027 Cyclic nucleotide-binding domain JCR19_07610 PF00520 Ion transport protein JCR19_07615 PF07690 Major Facilitator Superfamily JCR19_07630 PF03466 LysR substrate binding domain JCR19_07630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_07635 PF04284 Protein of unknown function (DUF441) JCR19_07645 PF01479 S4 domain JCR19_07645 PF00849 RNA pseudouridylate synthase JCR19_07660 PF00849 RNA pseudouridylate synthase JCR19_07660 PF01479 S4 domain JCR19_07665 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCR19_07670 PF08676 MutL C terminal dimerisation domain JCR19_07670 PF01119 DNA mismatch repair protein, C-terminal domain JCR19_07680 PF17209 Hfq protein JCR19_07690 PF00881 Nitroreductase family JCR19_07700 PF00149 Calcineurin-like phosphoesterase JCR19_07705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR19_07710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JCR19_07710 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR19_07715 PF00958 GMP synthase C terminal domain JCR19_07715 PF00117 Glutamine amidotransferase class-I JCR19_07715 PF02540 NAD synthase JCR19_07720 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JCR19_07725 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JCR19_07730 PF13520 Amino acid permease JCR19_07735 PF00171 Aldehyde dehydrogenase family JCR19_07750 PF00465 Iron-containing alcohol dehydrogenase JCR19_07755 PF05970 PIF1-like helicase JCR19_07755 PF14493 Helix-turn-helix domain JCR19_07765 PF06445 GyrI-like small molecule binding domain JCR19_07770 PF02110 Hydroxyethylthiazole kinase family JCR19_07785 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JCR19_07785 PF11940 Domain of unknown function (DUF3458) Ig-like fold JCR19_07785 PF01433 Peptidase family M1 domain JCR19_07795 PF00106 short chain dehydrogenase JCR19_07805 PF01817 Chorismate mutase type II JCR19_07810 PF01037 Lrp/AsnC ligand binding domain JCR19_07820 PF00440 Bacterial regulatory proteins, tetR family JCR19_07825 PF07715 TonB-dependent Receptor Plug Domain JCR19_07825 PF00593 TonB dependent receptor JCR19_07830 PF00924 Mechanosensitive ion channel JCR19_07865 PF00593 TonB dependent receptor JCR19_07865 PF07715 TonB-dependent Receptor Plug Domain JCR19_07885 PF00005 ABC transporter JCR19_07885 PF12848 ABC transporter JCR19_07890 PF00582 Universal stress protein family JCR19_07915 PF00690 Cation transporter/ATPase, N-terminus JCR19_07915 PF00689 Cation transporting ATPase, C-terminus JCR19_07920 PF02308 MgtC family JCR19_07925 PF03594 Benzoate membrane transport protein JCR19_07930 PF01037 Lrp/AsnC ligand binding domain JCR19_07935 PF01810 LysE type translocator JCR19_07940 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCR19_07945 PF03466 LysR substrate binding domain JCR19_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_07955 PF02803 Thiolase, C-terminal domain JCR19_07955 PF00108 Thiolase, N-terminal domain JCR19_07965 PF01575 MaoC like domain JCR19_07970 PF00144 Beta-lactamase JCR19_07980 PF07690 Major Facilitator Superfamily JCR19_07985 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JCR19_07985 PF12169 DNA polymerase III subunits gamma and tau domain III JCR19_07985 PF12170 DNA polymerase III tau subunit V interacting with alpha JCR19_07990 PF04185 Phosphoesterase family JCR19_07990 PF05506 Domain of unknown function (DUF756) JCR19_07995 PF03061 Thioesterase superfamily JCR19_08000 PF00465 Iron-containing alcohol dehydrogenase JCR19_08010 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR19_08015 PF01565 FAD binding domain JCR19_08015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCR19_08030 PF01645 Conserved region in glutamate synthase JCR19_08050 PF12832 MFS_1 like family JCR19_08060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR19_08060 PF00289 Biotin carboxylase, N-terminal domain JCR19_08060 PF02785 Biotin carboxylase C-terminal domain JCR19_08065 PF00364 Biotin-requiring enzyme JCR19_08070 PF01220 Dehydroquinase class II JCR19_08075 PF13438 Domain of unknown function (DUF4113) JCR19_08075 PF00817 impB/mucB/samB family JCR19_08075 PF11799 impB/mucB/samB family C-terminal domain JCR19_08085 PF00005 ABC transporter JCR19_08090 PF00072 Response regulator receiver domain JCR19_08090 PF00486 Transcriptional regulatory protein, C terminal JCR19_08100 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR19_08100 PF04324 BFD-like [2Fe-2S] binding domain JCR19_08100 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_08100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR19_08100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR19_08100 PF13806 Rieske-like [2Fe-2S] domain JCR19_08105 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR19_08105 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_08105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR19_08105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR19_08105 PF04324 BFD-like [2Fe-2S] binding domain JCR19_08110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR19_08110 PF00384 Molybdopterin oxidoreductase JCR19_08110 PF01568 Molydopterin dinucleotide binding domain JCR19_08110 PF04324 BFD-like [2Fe-2S] binding domain JCR19_08115 PF12804 MobA-like NTP transferase domain JCR19_08120 PF01568 Molydopterin dinucleotide binding domain JCR19_08120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR19_08120 PF00384 Molybdopterin oxidoreductase JCR19_08125 PF04055 Radical SAM superfamily JCR19_08125 PF06463 Molybdenum Cofactor Synthesis C JCR19_08135 PF02391 MoaE protein JCR19_08140 PF01967 MoaC family JCR19_08140 PF00994 Probable molybdopterin binding domain JCR19_08145 PF00994 Probable molybdopterin binding domain JCR19_08145 PF03454 MoeA C-terminal region (domain IV) JCR19_08145 PF03453 MoeA N-terminal region (domain I and II) JCR19_08150 PF01638 HxlR-like helix-turn-helix JCR19_08155 PF00392 Bacterial regulatory proteins, gntR family JCR19_08155 PF00155 Aminotransferase class I and II JCR19_08160 PF00892 EamA-like transporter family JCR19_08180 PF02635 DsrE/DsrF-like family JCR19_08185 PF16363 GDP-mannose 4,6 dehydratase JCR19_08190 PF10415 Fumarase C C-terminus JCR19_08190 PF00206 Lyase JCR19_08210 PF01266 FAD dependent oxidoreductase JCR19_08220 PF02542 YgbB family JCR19_08230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR19_08230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR19_08250 PF00072 Response regulator receiver domain JCR19_08250 PF02954 Bacterial regulatory protein, Fis family JCR19_08250 PF00158 Sigma-54 interaction domain JCR19_08255 PF00989 PAS fold JCR19_08255 PF00512 His Kinase A (phospho-acceptor) domain JCR19_08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_08265 PF00919 Uncharacterized protein family UPF0004 JCR19_08265 PF18693 TRAM domain JCR19_08265 PF04055 Radical SAM superfamily JCR19_08270 PF00696 Amino acid kinase family JCR19_08275 PF01765 Ribosome recycling factor JCR19_08280 PF01255 Putative undecaprenyl diphosphate synthase JCR19_08290 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JCR19_08290 PF13288 DXP reductoisomerase C-terminal domain JCR19_08290 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JCR19_08295 PF02163 Peptidase family M50 JCR19_08295 PF13180 PDZ domain JCR19_08295 PF17820 PDZ domain JCR19_08300 PF01103 Surface antigen JCR19_08300 PF07244 Surface antigen variable number repeat JCR19_08310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JCR19_08310 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_08315 PF07977 FabA-like domain JCR19_08320 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_08320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JCR19_08335 PF02631 RecX family JCR19_08340 PF00154 recA bacterial DNA recombination protein JCR19_08345 PF01479 S4 domain JCR19_08350 PF13419 Haloacid dehalogenase-like hydrolase JCR19_08375 PF01037 Lrp/AsnC ligand binding domain JCR19_08380 PF00266 Aminotransferase class-V JCR19_08385 PF00324 Amino acid permease JCR19_08395 PF05922 Peptidase inhibitor I9 JCR19_08395 PF00082 Subtilase family JCR19_08400 PF00916 Sulfate permease family JCR19_08400 PF01740 STAS domain JCR19_08405 PF02586 SOS response associated peptidase (SRAP) JCR19_08410 PF07995 Glucose / Sorbosone dehydrogenase JCR19_08420 PF03707 Bacterial signalling protein N terminal repeat JCR19_08420 PF00990 Diguanylate cyclase, GGDEF domain JCR19_08420 PF00563 EAL domain JCR19_08440 PF02378 Phosphotransferase system, EIIC JCR19_08440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCR19_08445 PF00294 pfkB family carbohydrate kinase JCR19_08450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCR19_08450 PF00381 PTS HPr component phosphorylation site JCR19_08450 PF02896 PEP-utilising enzyme, TIM barrel domain JCR19_08450 PF00391 PEP-utilising enzyme, mobile domain JCR19_08450 PF05524 PEP-utilising enzyme, N-terminal JCR19_08475 PF05525 Branched-chain amino acid transport protein JCR19_08480 PF00557 Metallopeptidase family M24 JCR19_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_08485 PF03466 LysR substrate binding domain JCR19_08495 PF00462 Glutaredoxin JCR19_08500 PF00202 Aminotransferase class-III JCR19_08505 PF00571 CBS domain JCR19_08505 PF00478 IMP dehydrogenase / GMP reductase domain JCR19_08530 PF00448 SRP54-type protein, GTPase domain JCR19_08530 PF02881 SRP54-type protein, helical bundle domain JCR19_08540 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JCR19_08555 PF08173 Membrane bound YbgT-like protein JCR19_08560 PF02322 Cytochrome bd terminal oxidase subunit II JCR19_08565 PF01654 Cytochrome bd terminal oxidase subunit I JCR19_08575 PF13737 Transposase DDE domain JCR19_08580 PF07290 Protein of unknown function (DUF1449) JCR19_08590 PF00294 pfkB family carbohydrate kinase JCR19_08595 PF00593 TonB dependent receptor JCR19_08595 PF07715 TonB-dependent Receptor Plug Domain JCR19_08600 PF08367 Peptidase M16C associated JCR19_08600 PF00675 Insulinase (Peptidase family M16) JCR19_08600 PF05193 Peptidase M16 inactive domain JCR19_08605 PF02253 Phospholipase A1 JCR19_08610 PF02386 Cation transport protein JCR19_08615 PF02254 TrkA-N domain JCR19_08615 PF02080 TrkA-C domain JCR19_08620 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_08620 PF00585 C-terminal regulatory domain of Threonine dehydratase JCR19_08625 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCR19_08640 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR19_08640 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR19_08650 PF02617 ATP-dependent Clp protease adaptor protein ClpS JCR19_08655 PF00004 ATPase family associated with various cellular activities (AAA) JCR19_08655 PF07724 AAA domain (Cdc48 subfamily) JCR19_08655 PF17871 AAA lid domain JCR19_08655 PF02861 Clp amino terminal domain, pathogenicity island component JCR19_08655 PF10431 C-terminal, D2-small domain, of ClpB protein JCR19_08660 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JCR19_08665 PF00793 DAHP synthetase I family JCR19_08680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR19_08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_08710 PF06418 CTP synthase N-terminus JCR19_08710 PF00117 Glutamine amidotransferase class-I JCR19_08715 PF00793 DAHP synthetase I family JCR19_08720 PF00113 Enolase, C-terminal TIM barrel domain JCR19_08720 PF03952 Enolase, N-terminal domain JCR19_08725 PF04239 Protein of unknown function (DUF421) JCR19_08730 PF04977 Septum formation initiator JCR19_08735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JCR19_08740 PF01144 Coenzyme A transferase JCR19_08745 PF01144 Coenzyme A transferase JCR19_08750 PF02803 Thiolase, C-terminal domain JCR19_08750 PF00108 Thiolase, N-terminal domain JCR19_08755 PF00206 Lyase JCR19_08755 PF10397 Adenylosuccinate lyase C-terminus JCR19_08765 PF07690 Major Facilitator Superfamily JCR19_08770 PF02627 Carboxymuconolactone decarboxylase family JCR19_08775 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JCR19_08775 PF00775 Dioxygenase JCR19_08780 PF00775 Dioxygenase JCR19_08785 PF01487 Type I 3-dehydroquinase JCR19_08790 PF05048 Periplasmic copper-binding protein (NosD) JCR19_08795 PF04966 Carbohydrate-selective porin, OprB family JCR19_08800 PF13360 PQQ-like domain JCR19_08800 PF01011 PQQ enzyme repeat JCR19_08810 PF04143 Sulphur transport JCR19_08820 PF00753 Metallo-beta-lactamase superfamily JCR19_08825 PF09339 IclR helix-turn-helix domain JCR19_08825 PF01614 Bacterial transcriptional regulator JCR19_08830 PF03466 LysR substrate binding domain JCR19_08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_08835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_08835 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_08835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_08850 PF00106 short chain dehydrogenase JCR19_08860 PF07690 Major Facilitator Superfamily JCR19_08870 PF01425 Amidase JCR19_08875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR19_08890 PF00355 Rieske [2Fe-2S] domain JCR19_08890 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR19_08905 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_08905 PF00175 Oxidoreductase NAD-binding domain JCR19_08910 PF01613 Flavin reductase like domain JCR19_08915 PF12833 Helix-turn-helix domain JCR19_08915 PF02311 AraC-like ligand binding domain JCR19_08920 PF02727 Copper amine oxidase, N2 domain JCR19_08920 PF07833 Copper amine oxidase N-terminal domain JCR19_08920 PF02728 Copper amine oxidase, N3 domain JCR19_08920 PF01179 Copper amine oxidase, enzyme domain JCR19_08930 PF00171 Aldehyde dehydrogenase family JCR19_08935 PF01804 Penicillin amidase JCR19_08940 PF12146 Serine aminopeptidase, S33 JCR19_08945 PF02803 Thiolase, C-terminal domain JCR19_08945 PF00108 Thiolase, N-terminal domain JCR19_08950 PF01144 Coenzyme A transferase JCR19_08955 PF01144 Coenzyme A transferase JCR19_08960 PF00775 Dioxygenase JCR19_08960 PF04444 Catechol dioxygenase N terminus JCR19_08965 PF02426 Muconolactone delta-isomerase JCR19_08970 PF13378 Enolase C-terminal domain-like JCR19_08970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR19_08975 PF03466 LysR substrate binding domain JCR19_08975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_08985 PF07729 FCD domain JCR19_08985 PF00392 Bacterial regulatory proteins, gntR family JCR19_08990 PF00920 Dehydratase family JCR19_08995 PF07690 Major Facilitator Superfamily JCR19_09005 PF00171 Aldehyde dehydrogenase family JCR19_09025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_09025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_09025 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_09035 PF00158 Sigma-54 interaction domain JCR19_09035 PF06506 Propionate catabolism activator JCR19_09035 PF02954 Bacterial regulatory protein, Fis family JCR19_09040 PF00501 AMP-binding enzyme JCR19_09040 PF13193 AMP-binding enzyme C-terminal domain JCR19_09045 PF04341 Protein of unknown function, DUF485 JCR19_09050 PF00474 Sodium:solute symporter family JCR19_09055 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_09055 PF00107 Zinc-binding dehydrogenase JCR19_09060 PF00171 Aldehyde dehydrogenase family JCR19_09070 PF00561 alpha/beta hydrolase fold JCR19_09075 PF06628 Catalase-related immune-responsive JCR19_09075 PF00199 Catalase JCR19_09090 PF07859 alpha/beta hydrolase fold JCR19_09095 PF01047 MarR family JCR19_09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_09100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR19_09105 PF00106 short chain dehydrogenase JCR19_09110 PF01872 RibD C-terminal domain JCR19_09115 PF09278 MerR, DNA binding JCR19_09115 PF00376 MerR family regulatory protein JCR19_09125 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_09135 PF12706 Beta-lactamase superfamily domain JCR19_09140 PF08359 YsiA-like protein, C-terminal region JCR19_09140 PF00440 Bacterial regulatory proteins, tetR family JCR19_09150 PF00857 Isochorismatase family JCR19_09155 PF03466 LysR substrate binding domain JCR19_09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09160 PF07995 Glucose / Sorbosone dehydrogenase JCR19_09165 PF00999 Sodium/hydrogen exchanger family JCR19_09165 PF02254 TrkA-N domain JCR19_09175 PF01546 Peptidase family M20/M25/M40 JCR19_09175 PF07687 Peptidase dimerisation domain JCR19_09185 PF08479 POTRA domain, ShlB-type JCR19_09185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JCR19_09185 PF17287 POTRA domain JCR19_09190 PF04829 Pre-toxin domain with VENN motif JCR19_09190 PF13332 Hemagglutinin repeat JCR19_09190 PF13018 Extended Signal Peptide of Type V secretion system JCR19_09190 PF05860 haemagglutination activity domain JCR19_09205 PF07690 Major Facilitator Superfamily JCR19_09210 PF04909 Amidohydrolase JCR19_09220 PF00392 Bacterial regulatory proteins, gntR family JCR19_09220 PF07702 UTRA domain JCR19_09225 PF08450 SMP-30/Gluconolactonase/LRE-like region JCR19_09235 PF03466 LysR substrate binding domain JCR19_09235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09255 PF07690 Major Facilitator Superfamily JCR19_09260 PF01842 ACT domain JCR19_09260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR19_09260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR19_09265 PF03737 Aldolase/RraA JCR19_09285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_09285 PF00529 HlyD membrane-fusion protein of T1SS JCR19_09300 PF00171 Aldehyde dehydrogenase family JCR19_09305 PF00920 Dehydratase family JCR19_09315 PF03466 LysR substrate binding domain JCR19_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09320 PF01370 NAD dependent epimerase/dehydratase family JCR19_09325 PF07690 Major Facilitator Superfamily JCR19_09330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR19_09330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR19_09335 PF12833 Helix-turn-helix domain JCR19_09335 PF06719 AraC-type transcriptional regulator N-terminus JCR19_09350 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_09350 PF00107 Zinc-binding dehydrogenase JCR19_09360 PF01032 FecCD transport family JCR19_09365 PF00005 ABC transporter JCR19_09385 PF14572 Phosphoribosyl synthetase-associated domain JCR19_09385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR19_09390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR19_09460 PF00196 Bacterial regulatory proteins, luxR family JCR19_09465 PF01425 Amidase JCR19_09470 PF13533 Biotin-lipoyl like JCR19_09475 PF07690 Major Facilitator Superfamily JCR19_09500 PF01975 Survival protein SurE JCR19_09505 PF13737 Transposase DDE domain JCR19_09515 PF13291 ACT domain JCR19_09515 PF04607 Region found in RelA / SpoT proteins JCR19_09515 PF02824 TGS domain JCR19_09565 PF12146 Serine aminopeptidase, S33 JCR19_09570 PF12833 Helix-turn-helix domain JCR19_09570 PF02311 AraC-like ligand binding domain JCR19_09580 PF16527 Two-component sensor protein CpxA, periplasmic domain JCR19_09580 PF00672 HAMP domain JCR19_09580 PF00512 His Kinase A (phospho-acceptor) domain JCR19_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_09585 PF00072 Response regulator receiver domain JCR19_09585 PF00486 Transcriptional regulatory protein, C terminal JCR19_09590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_09590 PF00529 HlyD membrane-fusion protein of T1SS JCR19_09595 PF00873 AcrB/AcrD/AcrF family JCR19_09600 PF02321 Outer membrane efflux protein JCR19_09605 PF12146 Serine aminopeptidase, S33 JCR19_09610 PF00743 Flavin-binding monooxygenase-like JCR19_09615 PF01593 Flavin containing amine oxidoreductase JCR19_09630 PF01266 FAD dependent oxidoreductase JCR19_09650 PF16970 Type-1 fimbrial protein, A JCR19_09660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR19_09660 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR19_09665 PF13953 PapC C-terminal domain JCR19_09665 PF00577 Outer membrane usher protein JCR19_09665 PF13954 PapC N-terminal domain JCR19_09670 PF00419 Fimbrial protein JCR19_09680 PF00107 Zinc-binding dehydrogenase JCR19_09680 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_09690 PF00199 Catalase JCR19_09705 PF13091 PLD-like domain JCR19_09725 PF01244 Membrane dipeptidase (Peptidase family M19) JCR19_09730 PF04055 Radical SAM superfamily JCR19_09730 PF13186 Iron-sulfur cluster-binding domain JCR19_09735 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JCR19_09740 PF03070 TENA/THI-4/PQQC family JCR19_09745 PF12706 Beta-lactamase superfamily domain JCR19_09750 PF08042 PqqA family JCR19_09755 PF02503 Polyphosphate kinase middle domain JCR19_09755 PF13089 Polyphosphate kinase N-terminal domain JCR19_09755 PF17941 Polyphosphate kinase C-terminal domain 1 JCR19_09755 PF13090 Polyphosphate kinase C-terminal domain 2 JCR19_09760 PF00149 Calcineurin-like phosphoesterase JCR19_09770 PF00550 Phosphopantetheine attachment site JCR19_09770 PF00857 Isochorismatase family JCR19_09775 PF00106 short chain dehydrogenase JCR19_09780 PF03459 TOBE domain JCR19_09780 PF00005 ABC transporter JCR19_09785 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_09795 PF03459 TOBE domain JCR19_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09800 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR19_09800 PF00355 Rieske [2Fe-2S] domain JCR19_09805 PF00866 Ring hydroxylating beta subunit JCR19_09810 PF00175 Oxidoreductase NAD-binding domain JCR19_09810 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_09810 PF00970 Oxidoreductase FAD-binding domain JCR19_09815 PF12833 Helix-turn-helix domain JCR19_09815 PF14525 AraC-binding-like domain JCR19_09825 PF01613 Flavin reductase like domain JCR19_09840 PF01738 Dienelactone hydrolase family JCR19_09845 PF07690 Major Facilitator Superfamily JCR19_09850 PF12833 Helix-turn-helix domain JCR19_09850 PF06719 AraC-type transcriptional regulator N-terminus JCR19_09875 PF03466 LysR substrate binding domain JCR19_09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09880 PF01144 Coenzyme A transferase JCR19_09885 PF01144 Coenzyme A transferase JCR19_09890 PF02667 Short chain fatty acid transporter JCR19_09895 PF02803 Thiolase, C-terminal domain JCR19_09895 PF00108 Thiolase, N-terminal domain JCR19_09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09900 PF03466 LysR substrate binding domain JCR19_09905 PF03466 LysR substrate binding domain JCR19_09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_09920 PF10415 Fumarase C C-terminus JCR19_09920 PF00206 Lyase JCR19_09925 PF07715 TonB-dependent Receptor Plug Domain JCR19_09925 PF00593 TonB dependent receptor JCR19_09930 PF00083 Sugar (and other) transporter JCR19_09945 PF00005 ABC transporter JCR19_09950 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_09955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR19_09970 PF07702 UTRA domain JCR19_09970 PF00392 Bacterial regulatory proteins, gntR family JCR19_09980 PF02525 Flavodoxin-like fold JCR19_09985 PF01638 HxlR-like helix-turn-helix JCR19_09990 PF12833 Helix-turn-helix domain JCR19_09990 PF06445 GyrI-like small molecule binding domain JCR19_10005 PF01925 Sulfite exporter TauE/SafE JCR19_10010 PF00753 Metallo-beta-lactamase superfamily JCR19_10010 PF04273 Putative phosphatase (DUF442) JCR19_10015 PF04273 Putative phosphatase (DUF442) JCR19_10015 PF00753 Metallo-beta-lactamase superfamily JCR19_10020 PF00072 Response regulator receiver domain JCR19_10020 PF00158 Sigma-54 interaction domain JCR19_10020 PF02954 Bacterial regulatory protein, Fis family JCR19_10025 PF01062 Bestrophin, RFP-TM, chloride channel JCR19_10030 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_10030 PF00107 Zinc-binding dehydrogenase JCR19_10035 PF00106 short chain dehydrogenase JCR19_10040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR19_10040 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_10045 PF02817 e3 binding domain JCR19_10045 PF00364 Biotin-requiring enzyme JCR19_10045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR19_10050 PF02780 Transketolase, C-terminal domain JCR19_10050 PF02779 Transketolase, pyrimidine binding domain JCR19_10055 PF00676 Dehydrogenase E1 component JCR19_10060 PF04055 Radical SAM superfamily JCR19_10075 PF00990 Diguanylate cyclase, GGDEF domain JCR19_10075 PF08448 PAS fold JCR19_10080 PF01264 Chorismate synthase JCR19_10085 PF05175 Methyltransferase small domain JCR19_10090 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_10100 PF00004 ATPase family associated with various cellular activities (AAA) JCR19_10100 PF01434 Peptidase family M41 JCR19_10100 PF17862 AAA+ lid domain JCR19_10110 PF05166 YcgL domain JCR19_10130 PF00570 HRDC domain JCR19_10130 PF01612 3'-5' exonuclease JCR19_10135 PF02132 RecR protein JCR19_10135 PF13662 Toprim domain JCR19_10140 PF02575 YbaB/EbfC DNA-binding family JCR19_10150 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR19_10155 PF00561 alpha/beta hydrolase fold JCR19_10160 PF08241 Methyltransferase domain JCR19_10190 PF01230 HIT domain JCR19_10225 PF00005 ABC transporter JCR19_10230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_10240 PF02684 Lipid-A-disaccharide synthetase JCR19_10245 PF00593 TonB dependent receptor JCR19_10245 PF07715 TonB-dependent Receptor Plug Domain JCR19_10265 PF01925 Sulfite exporter TauE/SafE JCR19_10270 PF00793 DAHP synthetase I family JCR19_10275 PF02654 Cobalamin-5-phosphate synthase JCR19_10290 PF02277 Phosphoribosyltransferase JCR19_10295 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JCR19_10305 PF13419 Haloacid dehalogenase-like hydrolase JCR19_10330 PF07715 TonB-dependent Receptor Plug Domain JCR19_10330 PF00593 TonB dependent receptor JCR19_10345 PF04183 IucA / IucC family JCR19_10345 PF06276 Ferric iron reductase FhuF-like transporter JCR19_10350 PF06276 Ferric iron reductase FhuF-like transporter JCR19_10350 PF04183 IucA / IucC family JCR19_10355 PF07690 Major Facilitator Superfamily JCR19_10360 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR19_10365 PF04183 IucA / IucC family JCR19_10365 PF06276 Ferric iron reductase FhuF-like transporter JCR19_10370 PF04073 Aminoacyl-tRNA editing domain JCR19_10380 PF03109 ABC1 family JCR19_10385 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_10385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_10385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_10390 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_10390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_10390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_10395 PF00487 Fatty acid desaturase JCR19_10400 PF12833 Helix-turn-helix domain JCR19_10400 PF12852 Cupin JCR19_10405 PF00639 PPIC-type PPIASE domain JCR19_10405 PF09312 SurA N-terminal domain JCR19_10410 PF00216 Bacterial DNA-binding protein JCR19_10425 PF02082 Transcriptional regulator JCR19_10430 PF00266 Aminotransferase class-V JCR19_10435 PF01592 NifU-like N terminal domain JCR19_10440 PF01521 Iron-sulphur cluster biosynthesis JCR19_10445 PF00226 DnaJ domain JCR19_10445 PF07743 HSCB C-terminal oligomerisation domain JCR19_10450 PF00012 Hsp70 protein JCR19_10455 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_10460 PF00211 Adenylate and Guanylate cyclase catalytic domain JCR19_10470 PF03461 TRCF domain JCR19_10470 PF00270 DEAD/DEAH box helicase JCR19_10470 PF02559 CarD-like/TRCF domain JCR19_10470 PF00271 Helicase conserved C-terminal domain JCR19_10470 PF17757 UvrB interaction domain JCR19_10490 PF03737 Aldolase/RraA JCR19_10495 PF13460 NAD(P)H-binding JCR19_10500 PF01649 Ribosomal protein S20 JCR19_10510 PF00459 Inositol monophosphatase family JCR19_10525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR19_10525 PF00005 ABC transporter JCR19_10530 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_10535 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_10540 PF01432 Peptidase family M3 JCR19_10560 PF00593 TonB dependent receptor JCR19_10560 PF07715 TonB-dependent Receptor Plug Domain JCR19_10570 PF01618 MotA/TolQ/ExbB proton channel family JCR19_10575 PF02472 Biopolymer transport protein ExbD/TolR JCR19_10580 PF02472 Biopolymer transport protein ExbD/TolR JCR19_10590 PF01274 Malate synthase JCR19_10595 PF03969 AFG1-like ATPase JCR19_10605 PF00743 Flavin-binding monooxygenase-like JCR19_10615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCR19_10625 PF00216 Bacterial DNA-binding protein JCR19_10630 PF00575 S1 RNA binding domain JCR19_10635 PF02224 Cytidylate kinase JCR19_10645 PF14437 MafB19-like deaminase JCR19_10655 PF03167 Uracil DNA glycosylase superfamily JCR19_10665 PF03934 Type II secretion system (T2SS), protein K JCR19_10670 PF11612 Type II secretion system (T2SS), protein J JCR19_10670 PF07963 Prokaryotic N-terminal methylation motif JCR19_10675 PF07963 Prokaryotic N-terminal methylation motif JCR19_10675 PF02501 Type II secretion system (T2SS), protein I JCR19_10690 PF01026 TatD related DNase JCR19_10700 PF09115 DNA polymerase III, delta subunit, C terminal JCR19_10705 PF02348 Cytidylyltransferase JCR19_10710 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JCR19_10715 PF00005 ABC transporter JCR19_10715 PF00664 ABC transporter transmembrane region JCR19_10725 PF01618 MotA/TolQ/ExbB proton channel family JCR19_10730 PF02195 ParB-like nuclease domain JCR19_10730 PF17762 HTH domain found in ParB protein JCR19_10735 PF13614 AAA domain JCR19_10740 PF02527 rRNA small subunit methyltransferase G JCR19_10745 PF00483 Nucleotidyl transferase JCR19_10750 PF01636 Phosphotransferase enzyme family JCR19_10755 PF04453 LPS transport system D JCR19_10755 PF03968 OstA-like protein JCR19_10760 PF09312 SurA N-terminal domain JCR19_10760 PF00639 PPIC-type PPIASE domain JCR19_10765 PF01116 Fructose-bisphosphate aldolase class-II JCR19_10775 PF00162 Phosphoglycerate kinase JCR19_10785 PF02545 Maf-like protein JCR19_10790 PF08007 Cupin superfamily protein JCR19_10805 PF00375 Sodium:dicarboxylate symporter family JCR19_10810 PF06912 Protein of unknown function (DUF1275) JCR19_10815 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JCR19_10820 PF00664 ABC transporter transmembrane region JCR19_10820 PF00005 ABC transporter JCR19_10830 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR19_10830 PF12833 Helix-turn-helix domain JCR19_10835 PF01597 Glycine cleavage H-protein JCR19_10840 PF02146 Sir2 family JCR19_10845 PF00474 Sodium:solute symporter family JCR19_10850 PF01037 Lrp/AsnC ligand binding domain JCR19_10855 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JCR19_10855 PF14850 DNA-binding domain of Proline dehydrogenase JCR19_10855 PF01619 Proline dehydrogenase JCR19_10855 PF00171 Aldehyde dehydrogenase family JCR19_10860 PF04229 GrpB protein JCR19_10865 PF05958 tRNA (Uracil-5-)-methyltransferase JCR19_10875 PF09992 Phosphodiester glycosidase JCR19_10885 PF04264 YceI-like domain JCR19_10895 PF02780 Transketolase, C-terminal domain JCR19_10895 PF00456 Transketolase, thiamine diphosphate binding domain JCR19_10895 PF02779 Transketolase, pyrimidine binding domain JCR19_10900 PF02772 S-adenosylmethionine synthetase, central domain JCR19_10900 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCR19_10900 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCR19_10920 PF00905 Penicillin binding protein transpeptidase domain JCR19_10935 PF02075 Crossover junction endodeoxyribonuclease RuvC JCR19_10940 PF03853 YjeF-related protein N-terminus JCR19_10940 PF01256 Carbohydrate kinase JCR19_10945 PF08331 Domain of unknown function (DUF1730) JCR19_10950 PF06968 Biotin and Thiamin Synthesis associated domain JCR19_10950 PF04055 Radical SAM superfamily JCR19_10965 PF16970 Type-1 fimbrial protein, A JCR19_10970 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR19_10970 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR19_10975 PF13953 PapC C-terminal domain JCR19_10975 PF13954 PapC N-terminal domain JCR19_10975 PF00577 Outer membrane usher protein JCR19_10995 PF00892 EamA-like transporter family JCR19_11005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR19_11015 PF13737 Transposase DDE domain JCR19_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11025 PF03466 LysR substrate binding domain JCR19_11045 PF00440 Bacterial regulatory proteins, tetR family JCR19_11055 PF01709 Transcriptional regulator JCR19_11065 PF01037 Lrp/AsnC ligand binding domain JCR19_11075 PF00005 ABC transporter JCR19_11080 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11085 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_11100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR19_11110 PF00296 Luciferase-like monooxygenase JCR19_11115 PF03180 NLPA lipoprotein JCR19_11120 PF03180 NLPA lipoprotein JCR19_11125 PF00005 ABC transporter JCR19_11125 PF09383 NIL domain JCR19_11130 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11135 PF01926 50S ribosome-binding GTPase JCR19_11135 PF06071 Protein of unknown function (DUF933) JCR19_11160 PF03591 AzlC protein JCR19_11165 PF05437 Branched-chain amino acid transport protein (AzlD) JCR19_11175 PF02222 ATP-grasp domain JCR19_11180 PF01909 Nucleotidyltransferase domain JCR19_11180 PF08335 GlnD PII-uridylyltransferase JCR19_11180 PF01966 HD domain JCR19_11185 PF00155 Aminotransferase class I and II JCR19_11195 PF12833 Helix-turn-helix domain JCR19_11195 PF12852 Cupin JCR19_11200 PF00255 Glutathione peroxidase JCR19_11205 PF01641 SelR domain JCR19_11210 PF00155 Aminotransferase class I and II JCR19_11215 PF00375 Sodium:dicarboxylate symporter family JCR19_11220 PF00710 Asparaginase, N-terminal JCR19_11220 PF17763 Glutaminase/Asparaginase C-terminal domain JCR19_11225 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCR19_11225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCR19_11225 PF14579 Helix-hairpin-helix motif JCR19_11225 PF01336 OB-fold nucleic acid binding domain JCR19_11225 PF02811 PHP domain JCR19_11230 PF00588 SpoU rRNA Methylase family JCR19_11235 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_11250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_11250 PF13192 Thioredoxin domain JCR19_11265 PF03466 LysR substrate binding domain JCR19_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11270 PF01758 Sodium Bile acid symporter family JCR19_11275 PF01022 Bacterial regulatory protein, arsR family JCR19_11280 PF03960 ArsC family JCR19_11290 PF13382 Adenine deaminase C-terminal domain JCR19_11290 PF01979 Amidohydrolase family JCR19_11300 PF03466 LysR substrate binding domain JCR19_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR19_11315 PF01177 Asp/Glu/Hydantoin racemase JCR19_11320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JCR19_11325 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11330 PF00005 ABC transporter JCR19_11335 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR19_11345 PF00083 Sugar (and other) transporter JCR19_11350 PF00296 Luciferase-like monooxygenase JCR19_11355 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_11355 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR19_11355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_11365 PF01654 Cytochrome bd terminal oxidase subunit I JCR19_11370 PF02322 Cytochrome bd terminal oxidase subunit II JCR19_11380 PF00392 Bacterial regulatory proteins, gntR family JCR19_11380 PF00155 Aminotransferase class I and II JCR19_11385 PF03466 LysR substrate binding domain JCR19_11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11400 PF00698 Acyl transferase domain JCR19_11405 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCR19_11415 PF01039 Carboxyl transferase domain JCR19_11420 PF06857 Malonate decarboxylase delta subunit (MdcD) JCR19_11425 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCR19_11430 PF16957 Malonate decarboxylase, alpha subunit, transporter JCR19_11435 PF07690 Major Facilitator Superfamily JCR19_11450 PF00392 Bacterial regulatory proteins, gntR family JCR19_11450 PF00155 Aminotransferase class I and II JCR19_11455 PF04172 LrgB-like family JCR19_11460 PF03788 LrgA family JCR19_11465 PF03466 LysR substrate binding domain JCR19_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11470 PF14834 Glutathione S-transferase, C-terminal domain JCR19_11470 PF02798 Glutathione S-transferase, N-terminal domain JCR19_11475 PF02798 Glutathione S-transferase, N-terminal domain JCR19_11480 PF03466 LysR substrate binding domain JCR19_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11490 PF00581 Rhodanese-like domain JCR19_11495 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_11505 PF00266 Aminotransferase class-V JCR19_11515 PF01810 LysE type translocator JCR19_11520 PF03466 LysR substrate binding domain JCR19_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11530 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR19_11535 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR19_11540 PF00005 ABC transporter JCR19_11545 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11550 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11565 PF00072 Response regulator receiver domain JCR19_11570 PF00512 His Kinase A (phospho-acceptor) domain JCR19_11570 PF09308 LuxQ, periplasmic JCR19_11570 PF00072 Response regulator receiver domain JCR19_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_11580 PF01037 Lrp/AsnC ligand binding domain JCR19_11580 PF13404 AsnC-type helix-turn-helix domain JCR19_11590 PF00717 Peptidase S24-like JCR19_11615 PF00199 Catalase JCR19_11615 PF06628 Catalase-related immune-responsive JCR19_11615 PF18011 C-terminal domain found in long catalases JCR19_11625 PF00994 Probable molybdopterin binding domain JCR19_11625 PF18146 Damage-inducible protein CinA KH domain JCR19_11625 PF02464 Competence-damaged protein JCR19_11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11660 PF03466 LysR substrate binding domain JCR19_11680 PF13193 AMP-binding enzyme C-terminal domain JCR19_11680 PF00501 AMP-binding enzyme JCR19_11685 PF00440 Bacterial regulatory proteins, tetR family JCR19_11690 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_11690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_11690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_11695 PF01039 Carboxyl transferase domain JCR19_11700 PF00378 Enoyl-CoA hydratase/isomerase JCR19_11705 PF02785 Biotin carboxylase C-terminal domain JCR19_11705 PF00289 Biotin carboxylase, N-terminal domain JCR19_11705 PF00364 Biotin-requiring enzyme JCR19_11705 PF18140 Propionyl-coenzyme A carboxylase BT domain JCR19_11705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR19_11710 PF00682 HMGL-like JCR19_11715 PF03466 LysR substrate binding domain JCR19_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_11730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_11730 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR19_11730 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_11740 PF07690 Major Facilitator Superfamily JCR19_11750 PF01144 Coenzyme A transferase JCR19_11755 PF01144 Coenzyme A transferase JCR19_11760 PF07690 Major Facilitator Superfamily JCR19_11765 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_11765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_11765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_11770 PF00378 Enoyl-CoA hydratase/isomerase JCR19_11780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR19_11780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR19_11780 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR19_11785 PF00108 Thiolase, N-terminal domain JCR19_11785 PF02803 Thiolase, C-terminal domain JCR19_11790 PF09339 IclR helix-turn-helix domain JCR19_11795 PF07690 Major Facilitator Superfamily JCR19_11800 PF03060 Nitronate monooxygenase JCR19_11805 PF00378 Enoyl-CoA hydratase/isomerase JCR19_11810 PF09339 IclR helix-turn-helix domain JCR19_11815 PF02515 CoA-transferase family III JCR19_11820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_11820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_11820 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_11825 PF07690 Major Facilitator Superfamily JCR19_11830 PF13419 Haloacid dehalogenase-like hydrolase JCR19_11835 PF00266 Aminotransferase class-V JCR19_11840 PF01266 FAD dependent oxidoreductase JCR19_11845 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_11850 PF00005 ABC transporter JCR19_11850 PF08402 TOBE domain JCR19_11860 PF00392 Bacterial regulatory proteins, gntR family JCR19_11860 PF07702 UTRA domain JCR19_11865 PF01494 FAD binding domain JCR19_11870 PF09339 IclR helix-turn-helix domain JCR19_11870 PF01614 Bacterial transcriptional regulator JCR19_11875 PF02525 Flavodoxin-like fold JCR19_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_11880 PF03466 LysR substrate binding domain JCR19_11885 PF02627 Carboxymuconolactone decarboxylase family JCR19_11890 PF00171 Aldehyde dehydrogenase family JCR19_11900 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR19_11910 PF00171 Aldehyde dehydrogenase family JCR19_11915 PF00296 Luciferase-like monooxygenase JCR19_11920 PF01613 Flavin reductase like domain JCR19_11925 PF12697 Alpha/beta hydrolase family JCR19_11945 PF01292 Prokaryotic cytochrome b561 JCR19_11950 PF00199 Catalase JCR19_11985 PF03061 Thioesterase superfamily JCR19_11990 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_11995 PF08223 PaaX-like protein C-terminal domain JCR19_11995 PF07848 PaaX-like protein JCR19_12000 PF00501 AMP-binding enzyme JCR19_12000 PF14535 AMP-binding enzyme C-terminal domain JCR19_12005 PF00108 Thiolase, N-terminal domain JCR19_12005 PF02803 Thiolase, C-terminal domain JCR19_12010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR19_12010 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR19_12010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR19_12015 PF00378 Enoyl-CoA hydratase/isomerase JCR19_12020 PF00378 Enoyl-CoA hydratase/isomerase JCR19_12025 PF00970 Oxidoreductase FAD-binding domain JCR19_12025 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_12025 PF00175 Oxidoreductase NAD-binding domain JCR19_12030 PF01883 Iron-sulfur cluster assembly protein JCR19_12035 PF05138 Phenylacetic acid catabolic protein JCR19_12040 PF06243 Phenylacetic acid degradation B JCR19_12045 PF05138 Phenylacetic acid catabolic protein JCR19_12050 PF00171 Aldehyde dehydrogenase family JCR19_12050 PF01575 MaoC like domain JCR19_12055 PF03313 Serine dehydratase alpha chain JCR19_12055 PF03315 Serine dehydratase beta chain JCR19_12060 PF13520 Amino acid permease JCR19_12065 PF00171 Aldehyde dehydrogenase family JCR19_12070 PF00083 Sugar (and other) transporter JCR19_12080 PF04324 BFD-like [2Fe-2S] binding domain JCR19_12080 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_12090 PF01266 FAD dependent oxidoreductase JCR19_12095 PF05544 Proline racemase JCR19_12100 PF00392 Bacterial regulatory proteins, gntR family JCR19_12110 PF00701 Dihydrodipicolinate synthetase family JCR19_12120 PF00376 MerR family regulatory protein JCR19_12120 PF09278 MerR, DNA binding JCR19_12140 PF00005 ABC transporter JCR19_12145 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR19_12150 PF01425 Amidase JCR19_12155 PF08753 NikR C terminal nickel binding domain JCR19_12155 PF01402 Ribbon-helix-helix protein, copG family JCR19_12175 PF02525 Flavodoxin-like fold JCR19_12180 PF00289 Biotin carboxylase, N-terminal domain JCR19_12180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR19_12180 PF02785 Biotin carboxylase C-terminal domain JCR19_12195 PF00107 Zinc-binding dehydrogenase JCR19_12195 PF13823 Alcohol dehydrogenase GroES-associated JCR19_12195 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_12205 PF00440 Bacterial regulatory proteins, tetR family JCR19_12225 PF00654 Voltage gated chloride channel JCR19_12230 PF00289 Biotin carboxylase, N-terminal domain JCR19_12230 PF00364 Biotin-requiring enzyme JCR19_12230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR19_12230 PF02785 Biotin carboxylase C-terminal domain JCR19_12240 PF07286 Protein of unknown function (DUF1445) JCR19_12245 PF03746 LamB/YcsF family JCR19_12250 PF01566 Natural resistance-associated macrophage protein JCR19_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_12255 PF03466 LysR substrate binding domain JCR19_12270 PF03527 RHS protein JCR19_12270 PF05593 RHS Repeat JCR19_12275 PF13296 Putative type VI secretion system Rhs element Vgr JCR19_12275 PF04717 Type VI secretion system, phage-baseplate injector JCR19_12275 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR19_12285 PF13419 Haloacid dehalogenase-like hydrolase JCR19_12305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR19_12305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR19_12325 PF07690 Major Facilitator Superfamily JCR19_12335 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR19_12340 PF00563 EAL domain JCR19_12340 PF00990 Diguanylate cyclase, GGDEF domain JCR19_12340 PF03707 Bacterial signalling protein N terminal repeat JCR19_12345 PF00892 EamA-like transporter family JCR19_12350 PF01037 Lrp/AsnC ligand binding domain JCR19_12355 PF05190 MutS family domain IV JCR19_12355 PF00488 MutS domain V JCR19_12355 PF05192 MutS domain III JCR19_12355 PF05188 MutS domain II JCR19_12355 PF01624 MutS domain I JCR19_12365 PF00037 4Fe-4S binding domain JCR19_12365 PF11953 Domain of unknown function (DUF3470) JCR19_12375 PF01596 O-methyltransferase JCR19_12385 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_12390 PF01205 Uncharacterized protein family UPF0029 JCR19_12400 PF00005 ABC transporter JCR19_12400 PF03412 Peptidase C39 family JCR19_12400 PF00664 ABC transporter transmembrane region JCR19_12405 PF02321 Outer membrane efflux protein JCR19_12410 PF00005 ABC transporter JCR19_12410 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCR19_12415 PF03968 OstA-like protein JCR19_12430 PF01380 SIS domain JCR19_12430 PF00571 CBS domain JCR19_12435 PF09190 DALR domain JCR19_12435 PF01406 tRNA synthetases class I (C) catalytic domain JCR19_12460 PF13737 Transposase DDE domain JCR19_12465 PF01638 HxlR-like helix-turn-helix JCR19_12470 PF07690 Major Facilitator Superfamily JCR19_12495 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR19_12495 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR19_12505 PF00313 'Cold-shock' DNA-binding domain JCR19_12510 PF01810 LysE type translocator JCR19_12540 PF02601 Exonuclease VII, large subunit JCR19_12540 PF13742 OB-fold nucleic acid binding domain JCR19_12575 PF00376 MerR family regulatory protein JCR19_12575 PF09278 MerR, DNA binding JCR19_12580 PF00403 Heavy-metal-associated domain JCR19_12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_12590 PF03466 LysR substrate binding domain JCR19_12595 PF00355 Rieske [2Fe-2S] domain JCR19_12595 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR19_12600 PF00866 Ring hydroxylating beta subunit JCR19_12605 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_12605 PF00175 Oxidoreductase NAD-binding domain JCR19_12605 PF00970 Oxidoreductase FAD-binding domain JCR19_12610 PF00106 short chain dehydrogenase JCR19_12615 PF03594 Benzoate membrane transport protein JCR19_12620 PF07690 Major Facilitator Superfamily JCR19_12630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCR19_12630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCR19_12635 PF00270 DEAD/DEAH box helicase JCR19_12635 PF11898 Domain of unknown function (DUF3418) JCR19_12635 PF04408 Helicase associated domain (HA2) JCR19_12635 PF00271 Helicase conserved C-terminal domain JCR19_12635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JCR19_12640 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR19_12640 PF00578 AhpC/TSA family JCR19_12660 PF13192 Thioredoxin domain JCR19_12660 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_12670 PF00043 Glutathione S-transferase, C-terminal domain JCR19_12670 PF02798 Glutathione S-transferase, N-terminal domain JCR19_12680 PF02390 Putative methyltransferase JCR19_12685 PF00043 Glutathione S-transferase, C-terminal domain JCR19_12685 PF13417 Glutathione S-transferase, N-terminal domain JCR19_12695 PF13488 Glycine zipper JCR19_12695 PF00691 OmpA family JCR19_12700 PF01979 Amidohydrolase family JCR19_12705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR19_12705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR19_12715 PF10672 S-adenosylmethionine-dependent methyltransferase JCR19_12715 PF02926 THUMP domain JCR19_12715 PF01170 Putative RNA methylase family UPF0020 JCR19_12730 PF10431 C-terminal, D2-small domain, of ClpB protein JCR19_12730 PF02861 Clp amino terminal domain, pathogenicity island component JCR19_12730 PF17871 AAA lid domain JCR19_12730 PF07724 AAA domain (Cdc48 subfamily) JCR19_12730 PF00004 ATPase family associated with various cellular activities (AAA) JCR19_12745 PF02566 OsmC-like protein JCR19_12755 PF13545 Crp-like helix-turn-helix domain JCR19_12755 PF00027 Cyclic nucleotide-binding domain JCR19_12765 PF00248 Aldo/keto reductase family JCR19_12780 PF00709 Adenylosuccinate synthetase JCR19_12785 PF13393 Histidyl-tRNA synthetase JCR19_12790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR19_12790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR19_12795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR19_12795 PF02272 DHHA1 domain JCR19_12795 PF01411 tRNA synthetases class II (A) JCR19_12800 PF13840 ACT domain JCR19_12800 PF01842 ACT domain JCR19_12800 PF00696 Amino acid kinase family JCR19_12805 PF02599 Global regulator protein family JCR19_12810 PF01351 Ribonuclease HII JCR19_12820 PF01292 Prokaryotic cytochrome b561 JCR19_12825 PF00962 Adenosine/AMP deaminase JCR19_12830 PF00860 Permease family JCR19_12840 PF00743 Flavin-binding monooxygenase-like JCR19_12845 PF00106 short chain dehydrogenase JCR19_12855 PF02678 Pirin JCR19_12855 PF17954 Quercetinase C-terminal cupin domain JCR19_12860 PF17932 Tetracyclin repressor-like, C-terminal domain JCR19_12860 PF00440 Bacterial regulatory proteins, tetR family JCR19_12870 PF00106 short chain dehydrogenase JCR19_12880 PF13610 DDE domain JCR19_12890 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR19_12890 PF04717 Type VI secretion system, phage-baseplate injector JCR19_12890 PF13296 Putative type VI secretion system Rhs element Vgr JCR19_12910 PF13737 Transposase DDE domain JCR19_12915 PF03180 NLPA lipoprotein JCR19_12920 PF05987 Bacterial protein of unknown function (DUF898) JCR19_12935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR19_12935 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_12940 PF00764 Arginosuccinate synthase JCR19_12945 PF00360 Phytochrome region JCR19_12945 PF00563 EAL domain JCR19_12945 PF01590 GAF domain JCR19_12945 PF00990 Diguanylate cyclase, GGDEF domain JCR19_12950 PF01979 Amidohydrolase family JCR19_12955 PF00929 Exonuclease JCR19_12965 PF00593 TonB dependent receptor JCR19_12965 PF07715 TonB-dependent Receptor Plug Domain JCR19_12970 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_12970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR19_12975 PF00005 ABC transporter JCR19_12975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR19_12980 PF12911 N-terminal TM domain of oligopeptide transport permease C JCR19_12980 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_12985 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_12990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCR19_12995 PF01476 LysM domain JCR19_12995 PF01476 LysM domain JCR19_12995 PF01464 Transglycosylase SLT domain JCR19_12995 PF01464 Transglycosylase SLT domain JCR19_13000 PF00929 Exonuclease JCR19_13010 PF09297 NADH pyrophosphatase zinc ribbon domain JCR19_13010 PF00293 NUDIX domain JCR19_13020 PF04972 BON domain JCR19_13025 PF02021 Uncharacterised protein family UPF0102 JCR19_13030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR19_13040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_13040 PF03466 LysR substrate binding domain JCR19_13045 PF01810 LysE type translocator JCR19_13055 PF13411 MerR HTH family regulatory protein JCR19_13065 PF01494 FAD binding domain JCR19_13070 PF01494 FAD binding domain JCR19_13075 PF05195 Aminopeptidase P, N-terminal domain JCR19_13075 PF00557 Metallopeptidase family M24 JCR19_13115 PF08019 Phosphoethanolamine transferase EptA/EptB JCR19_13115 PF00884 Sulfatase JCR19_13120 PF13737 Transposase DDE domain JCR19_13130 PF13737 Transposase DDE domain JCR19_13175 PF01476 LysM domain JCR19_13175 PF01551 Peptidase family M23 JCR19_13175 PF08525 Opacity-associated protein A N-terminal motif JCR19_13500 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCR19_13505 PF00691 OmpA family JCR19_13505 PF04355 SmpA / OmlA family JCR19_13510 PF13018 Extended Signal Peptide of Type V secretion system JCR19_13510 PF05658 Head domain of trimeric autotransporter adhesin JCR19_13510 PF03895 YadA-like membrane anchor domain JCR19_13510 PF05662 Coiled stalk of trimeric autotransporter adhesin JCR19_13515 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCR19_13515 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR19_13515 PF00004 ATPase family associated with various cellular activities (AAA) JCR19_13520 PF02590 Predicted SPOUT methyltransferase JCR19_13525 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JCR19_13535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR19_13535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR19_13540 PF04060 Putative Fe-S cluster JCR19_13545 PF00633 Helix-hairpin-helix motif JCR19_13545 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR19_13545 PF10576 Iron-sulfur binding domain of endonuclease III JCR19_13555 PF05191 Adenylate kinase, active site lid JCR19_13570 PF00905 Penicillin binding protein transpeptidase domain JCR19_13570 PF03717 Penicillin-binding Protein dimerisation domain JCR19_13585 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR19_13590 PF01730 UreF JCR19_13595 PF02814 UreE urease accessory protein, N-terminal domain JCR19_13595 PF05194 UreE urease accessory protein, C-terminal domain JCR19_13605 PF00547 Urease, gamma subunit JCR19_13610 PF01774 UreD urease accessory protein JCR19_13625 PF00463 Isocitrate lyase family JCR19_13630 PF03466 LysR substrate binding domain JCR19_13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_13635 PF01595 Cyclin M transmembrane N-terminal domain JCR19_13635 PF00571 CBS domain JCR19_13635 PF03471 Transporter associated domain JCR19_13640 PF03600 Citrate transporter JCR19_13655 PF00009 Elongation factor Tu GTP binding domain JCR19_13660 PF01507 Phosphoadenosine phosphosulfate reductase family JCR19_13670 PF14052 Capsule assembly protein Wzi JCR19_13675 PF01336 OB-fold nucleic acid binding domain JCR19_13675 PF00152 tRNA synthetases class II (D, K and N) JCR19_13690 PF00301 Rubredoxin JCR19_13695 PF18113 Rubredoxin binding C-terminal domain JCR19_13695 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_13700 PF00561 alpha/beta hydrolase fold JCR19_13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_13705 PF03466 LysR substrate binding domain JCR19_13715 PF13090 Polyphosphate kinase C-terminal domain 2 JCR19_13715 PF17941 Polyphosphate kinase C-terminal domain 1 JCR19_13715 PF13089 Polyphosphate kinase N-terminal domain JCR19_13715 PF02503 Polyphosphate kinase middle domain JCR19_13720 PF00912 Transglycosylase JCR19_13725 PF01694 Rhomboid family JCR19_13735 PF00005 ABC transporter JCR19_13740 PF13472 GDSL-like Lipase/Acylhydrolase family JCR19_13745 PF00484 Carbonic anhydrase JCR19_13750 PF00561 alpha/beta hydrolase fold JCR19_13760 PF07715 TonB-dependent Receptor Plug Domain JCR19_13760 PF00593 TonB dependent receptor JCR19_13765 PF01106 NifU-like domain JCR19_13765 PF01521 Iron-sulphur cluster biosynthesis JCR19_13775 PF00884 Sulfatase JCR19_13780 PF03781 Sulfatase-modifying factor enzyme 1 JCR19_13795 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_13800 PF01384 Phosphate transporter family JCR19_13805 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCR19_13805 PF00809 Pterin binding enzyme JCR19_13805 PF02574 Homocysteine S-methyltransferase JCR19_13805 PF02310 B12 binding domain JCR19_13805 PF02607 B12 binding domain JCR19_13810 PF02780 Transketolase, C-terminal domain JCR19_13810 PF02779 Transketolase, pyrimidine binding domain JCR19_13815 PF00456 Transketolase, thiamine diphosphate binding domain JCR19_13820 PF07690 Major Facilitator Superfamily JCR19_13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_13830 PF03466 LysR substrate binding domain JCR19_13840 PF01263 Aldose 1-epimerase JCR19_13845 PF07690 Major Facilitator Superfamily JCR19_13850 PF02311 AraC-like ligand binding domain JCR19_13850 PF12833 Helix-turn-helix domain JCR19_13855 PF04960 Glutaminase JCR19_13860 PF01327 Polypeptide deformylase JCR19_13865 PF07690 Major Facilitator Superfamily JCR19_13875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR19_13875 PF00205 Thiamine pyrophosphate enzyme, central domain JCR19_13875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR19_13880 PF00171 Aldehyde dehydrogenase family JCR19_13885 PF01958 Domain of unknown function DUF108 JCR19_13885 PF03447 Homoserine dehydrogenase, NAD binding domain JCR19_13895 PF12697 Alpha/beta hydrolase family JCR19_13905 PF07690 Major Facilitator Superfamily JCR19_13910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_13910 PF14759 Reductase C-terminal JCR19_13915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR19_13925 PF00355 Rieske [2Fe-2S] domain JCR19_13935 PF00355 Rieske [2Fe-2S] domain JCR19_13940 PF09339 IclR helix-turn-helix domain JCR19_13940 PF01614 Bacterial transcriptional regulator JCR19_13955 PF00378 Enoyl-CoA hydratase/isomerase JCR19_13965 PF00535 Glycosyl transferase family 2 JCR19_13970 PF01522 Polysaccharide deacetylase JCR19_13970 PF14883 Hypothetical glycosyl hydrolase family 13 JCR19_13975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR19_13980 PF07152 YaeQ protein JCR19_13985 PF00375 Sodium:dicarboxylate symporter family JCR19_13990 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR19_13990 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR19_14000 PF03061 Thioesterase superfamily JCR19_14010 PF02028 BCCT, betaine/carnitine/choline family transporter JCR19_14015 PF02028 BCCT, betaine/carnitine/choline family transporter JCR19_14020 PF13977 BetI-type transcriptional repressor, C-terminal JCR19_14020 PF00440 Bacterial regulatory proteins, tetR family JCR19_14025 PF00171 Aldehyde dehydrogenase family JCR19_14030 PF00732 GMC oxidoreductase JCR19_14030 PF05199 GMC oxidoreductase JCR19_14035 PF06039 Malate:quinone oxidoreductase (Mqo) JCR19_14045 PF02574 Homocysteine S-methyltransferase JCR19_14050 PF13520 Amino acid permease JCR19_14075 PF01126 Heme oxygenase JCR19_14085 PF04575 Protein of unknown function (DUF560) JCR19_14095 PF00593 TonB dependent receptor JCR19_14095 PF07715 TonB-dependent Receptor Plug Domain JCR19_14105 PF08281 Sigma-70, region 4 JCR19_14105 PF04542 Sigma-70 region 2 JCR19_14115 PF00701 Dihydrodipicolinate synthetase family JCR19_14120 PF00083 Sugar (and other) transporter JCR19_14250 PF02767 DNA polymerase III beta subunit, central domain JCR19_14250 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR19_14250 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR19_14290 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JCR19_14495 PF01695 IstB-like ATP binding protein JCR19_14505 PF01555 DNA methylase JCR19_14560 PF01381 Helix-turn-helix JCR19_14630 PF13737 Transposase DDE domain JCR19_14665 PF07690 Major Facilitator Superfamily JCR19_14670 PF13533 Biotin-lipoyl like JCR19_14675 PF03061 Thioesterase superfamily JCR19_14680 PF00490 Delta-aminolevulinic acid dehydratase JCR19_14685 PF01266 FAD dependent oxidoreductase JCR19_14690 PF01370 NAD dependent epimerase/dehydratase family JCR19_14690 PF08338 Domain of unknown function (DUF1731) JCR19_14710 PF00149 Calcineurin-like phosphoesterase JCR19_14710 PF12320 Type 5 capsule protein repressor C-terminal domain JCR19_14720 PF01168 Alanine racemase, N-terminal domain JCR19_14725 PF00437 Type II/IV secretion system protein JCR19_14730 PF00437 Type II/IV secretion system protein JCR19_14735 PF01475 Ferric uptake regulator family JCR19_14740 PF04355 SmpA / OmlA family JCR19_14745 PF03658 RnfH family Ubiquitin JCR19_14755 PF01814 Hemerythrin HHE cation binding domain JCR19_14760 PF13230 Glutamine amidotransferases class-II JCR19_14770 PF00696 Amino acid kinase family JCR19_14775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR19_14775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR19_14775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR19_14775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR19_14780 PF00692 dUTPase JCR19_14785 PF00580 UvrD/REP helicase N-terminal domain JCR19_14785 PF13361 UvrD-like helicase C-terminal domain JCR19_14790 PF00691 OmpA family JCR19_14790 PF13488 Glycine zipper JCR19_14795 PF01553 Acyltransferase JCR19_14805 PF03775 Septum formation inhibitor MinC, C-terminal domain JCR19_14810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCR19_14815 PF03776 Septum formation topological specificity factor MinE JCR19_14835 PF01810 LysE type translocator JCR19_14840 PF01580 FtsK/SpoIIIE family JCR19_14840 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JCR19_14840 PF09397 Ftsk gamma domain JCR19_14840 PF17854 FtsK alpha domain JCR19_14845 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR19_14850 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JCR19_14855 PF04377 Arginine-tRNA-protein transferase, C terminus JCR19_14855 PF04376 Arginine-tRNA-protein transferase, N terminus JCR19_14860 PF00583 Acetyltransferase (GNAT) family JCR19_14880 PF03143 Elongation factor Tu C-terminal domain JCR19_14880 PF00009 Elongation factor Tu GTP binding domain JCR19_14880 PF03144 Elongation factor Tu domain 2 JCR19_14885 PF03144 Elongation factor Tu domain 2 JCR19_14885 PF00009 Elongation factor Tu GTP binding domain JCR19_14885 PF03764 Elongation factor G, domain IV JCR19_14885 PF14492 Elongation Factor G, domain II JCR19_14885 PF00679 Elongation factor G C-terminus JCR19_14890 PF00177 Ribosomal protein S7p/S5e JCR19_14895 PF00164 Ribosomal protein S12/S23 JCR19_14905 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_14905 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_14910 PF03653 Uncharacterised protein family (UPF0093) JCR19_14915 PF05726 Pirin C-terminal cupin domain JCR19_14915 PF02678 Pirin JCR19_14925 PF00795 Carbon-nitrogen hydrolase JCR19_14925 PF02540 NAD synthase JCR19_14940 PF00175 Oxidoreductase NAD-binding domain JCR19_14940 PF00970 Oxidoreductase FAD-binding domain JCR19_14940 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR19_14945 PF00171 Aldehyde dehydrogenase family JCR19_14950 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR19_14950 PF00355 Rieske [2Fe-2S] domain JCR19_14955 PF07859 alpha/beta hydrolase fold JCR19_14960 PF02028 BCCT, betaine/carnitine/choline family transporter JCR19_14965 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR19_14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_14970 PF03466 LysR substrate binding domain JCR19_14990 PF00037 4Fe-4S binding domain JCR19_14995 PF01467 Cytidylyltransferase-like JCR19_15000 PF01668 SmpB protein JCR19_15005 PF03358 NADPH-dependent FMN reductase JCR19_15010 PF02578 Multi-copper polyphenol oxidoreductase laccase JCR19_15015 PF01479 S4 domain JCR19_15015 PF00849 RNA pseudouridylate synthase JCR19_15020 PF13525 Outer membrane lipoprotein JCR19_15025 PF10410 DnaB-helicase binding domain of primase JCR19_15025 PF01807 CHC2 zinc finger JCR19_15025 PF08278 DNA primase DnaG DnaB-binding JCR19_15025 PF08275 DNA primase catalytic core, N-terminal domain JCR19_15030 PF01488 Shikimate / quinate 5-dehydrogenase JCR19_15030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JCR19_15030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JCR19_15040 PF03550 Outer membrane lipoprotein LolB JCR19_15045 PF00288 GHMP kinases N terminal domain JCR19_15045 PF08544 GHMP kinases C terminal JCR19_15070 PF14572 Phosphoribosyl synthetase-associated domain JCR19_15070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR19_15075 PF01386 Ribosomal L25p family JCR19_15080 PF01195 Peptidyl-tRNA hydrolase JCR19_15085 PF02261 Aspartate decarboxylase JCR19_15100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR19_15110 PF03070 TENA/THI-4/PQQC family JCR19_15110 PF08543 Phosphomethylpyrimidine kinase JCR19_15110 PF02581 Thiamine monophosphate synthase JCR19_15115 PF01476 LysM domain JCR19_15115 PF04972 BON domain JCR19_15120 PF00550 Phosphopantetheine attachment site JCR19_15130 PF00698 Acyl transferase domain JCR19_15135 PF01783 Ribosomal L32p protein family JCR19_15140 PF02620 Large ribosomal RNA subunit accumulation protein YceD JCR19_15145 PF04315 Elongation factor P hydroxylase JCR19_15150 PF01300 Telomere recombination JCR19_15155 PF02616 Segregation and condensation protein ScpA JCR19_15160 PF04079 Segregation and condensation complex subunit ScpB JCR19_15165 PF01479 S4 domain JCR19_15165 PF00849 RNA pseudouridylate synthase JCR19_15180 PF00155 Aminotransferase class I and II JCR19_15185 PF00202 Aminotransferase class-III JCR19_15185 PF04055 Radical SAM superfamily JCR19_15185 PF06968 Biotin and Thiamin Synthesis associated domain JCR19_15190 PF12697 Alpha/beta hydrolase family JCR19_15190 PF08241 Methyltransferase domain JCR19_15195 PF02358 Trehalose-phosphatase JCR19_15200 PF00982 Glycosyltransferase family 20 JCR19_15205 PF07690 Major Facilitator Superfamily JCR19_15210 PF00210 Ferritin-like domain JCR19_15215 PF01653 NAD-dependent DNA ligase adenylation domain JCR19_15215 PF00533 BRCA1 C Terminus (BRCT) domain JCR19_15215 PF03120 NAD-dependent DNA ligase OB-fold domain JCR19_15215 PF12826 Helix-hairpin-helix motif JCR19_15215 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCR19_15225 PF06470 SMC proteins Flexible Hinge Domain JCR19_15225 PF02463 RecF/RecN/SMC N terminal domain JCR19_15235 PF01925 Sulfite exporter TauE/SafE JCR19_15245 PF03309 Type III pantothenate kinase JCR19_15250 PF00448 SRP54-type protein, GTPase domain JCR19_15250 PF02978 Signal peptide binding domain JCR19_15250 PF02881 SRP54-type protein, helical bundle domain JCR19_15260 PF01207 Dihydrouridine synthase (Dus) JCR19_15290 PF00692 dUTPase JCR19_15305 PF01048 Phosphorylase superfamily JCR19_15310 PF10609 NUBPL iron-transfer P-loop NTPase JCR19_15320 PF01588 Putative tRNA binding domain JCR19_15320 PF09334 tRNA synthetases class I (M) JCR19_15345 PF13533 Biotin-lipoyl like JCR19_15350 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_15365 PF05552 Conserved TM helix JCR19_15380 PF00175 Oxidoreductase NAD-binding domain JCR19_15380 PF00970 Oxidoreductase FAD-binding domain JCR19_15385 PF03466 LysR substrate binding domain JCR19_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_15390 PF00313 'Cold-shock' DNA-binding domain JCR19_15400 PF00361 Proton-conducting membrane transporter JCR19_15405 PF00361 Proton-conducting membrane transporter JCR19_15410 PF00361 Proton-conducting membrane transporter JCR19_15410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR19_15415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR19_15420 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JCR19_15425 PF12838 4Fe-4S dicluster domain JCR19_15430 PF00146 NADH dehydrogenase JCR19_15435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR19_15435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JCR19_15435 PF00384 Molybdopterin oxidoreductase JCR19_15440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JCR19_15440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JCR19_15440 PF10531 SLBB domain JCR19_15450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JCR19_15450 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JCR19_15455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JCR19_15460 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JCR19_15465 PF00990 Diguanylate cyclase, GGDEF domain JCR19_15465 PF17151 Periplasmic sensor domain JCR19_15475 PF00672 HAMP domain JCR19_15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_15475 PF00512 His Kinase A (phospho-acceptor) domain JCR19_15480 PF00072 Response regulator receiver domain JCR19_15480 PF00486 Transcriptional regulatory protein, C terminal JCR19_15490 PF03477 ATP cone domain JCR19_15490 PF02867 Ribonucleotide reductase, barrel domain JCR19_15490 PF00317 Ribonucleotide reductase, all-alpha domain JCR19_15500 PF00268 Ribonucleotide reductase, small chain JCR19_15510 PF00512 His Kinase A (phospho-acceptor) domain JCR19_15510 PF13755 Sensor N-terminal transmembrane domain JCR19_15510 PF13756 Stimulus-sensing domain JCR19_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_15510 PF00672 HAMP domain JCR19_15550 PF13737 Transposase DDE domain JCR19_15590 PF13360 PQQ-like domain JCR19_15590 PF01011 PQQ enzyme repeat JCR19_15605 PF13737 Transposase DDE domain JCR19_15620 PF02567 Phenazine biosynthesis-like protein JCR19_15655 PF10544 T5orf172 domain JCR19_15660 PF13614 AAA domain JCR19_15680 PF00905 Penicillin binding protein transpeptidase domain JCR19_15690 PF01613 Flavin reductase like domain JCR19_15695 PF01717 Cobalamin-independent synthase, Catalytic domain JCR19_15695 PF08267 Cobalamin-independent synthase, N-terminal domain JCR19_15705 PF03466 LysR substrate binding domain JCR19_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_15710 PF01810 LysE type translocator JCR19_15720 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR19_15720 PF12833 Helix-turn-helix domain JCR19_15725 PF07687 Peptidase dimerisation domain JCR19_15725 PF01546 Peptidase family M20/M25/M40 JCR19_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_15735 PF03466 LysR substrate binding domain JCR19_15740 PF07690 Major Facilitator Superfamily JCR19_15750 PF03466 LysR substrate binding domain JCR19_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_15755 PF14537 Cytochrome c3 JCR19_15755 PF00890 FAD binding domain JCR19_15765 PF02515 CoA-transferase family III JCR19_15770 PF07690 Major Facilitator Superfamily JCR19_15775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_15775 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_15775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_15780 PF03466 LysR substrate binding domain JCR19_15785 PF00107 Zinc-binding dehydrogenase JCR19_15785 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_15790 PF00962 Adenosine/AMP deaminase JCR19_15815 PF02445 Quinolinate synthetase A protein JCR19_15820 PF01960 ArgJ family JCR19_15825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR19_15825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR19_15830 PF00893 Small Multidrug Resistance protein JCR19_15840 PF05275 Copper resistance protein B precursor (CopB) JCR19_15845 PF00394 Multicopper oxidase JCR19_15845 PF07731 Multicopper oxidase JCR19_15845 PF07732 Multicopper oxidase JCR19_15860 PF00834 Ribulose-phosphate 3 epimerase family JCR19_15870 PF00756 Putative esterase JCR19_15880 PF04445 Putative SAM-dependent methyltransferase JCR19_15885 PF00814 Glycoprotease family JCR19_15890 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_15895 PF00293 NUDIX domain JCR19_15935 PF04715 Anthranilate synthase component I, N terminal region JCR19_15935 PF00425 chorismate binding enzyme JCR19_15940 PF00155 Aminotransferase class I and II JCR19_15945 PF00815 Histidinol dehydrogenase JCR19_15950 PF01634 ATP phosphoribosyltransferase JCR19_15955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR19_15960 PF01722 BolA-like protein JCR19_15965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCR19_15970 PF04552 Sigma-54, DNA binding domain JCR19_15970 PF04963 Sigma-54 factor, core binding domain JCR19_15970 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCR19_16015 PF00795 Carbon-nitrogen hydrolase JCR19_16025 PF01047 MarR family JCR19_16030 PF02566 OsmC-like protein JCR19_16035 PF00437 Type II/IV secretion system protein JCR19_16055 PF00476 DNA polymerase family A JCR19_16055 PF01367 5'-3' exonuclease, C-terminal SAM fold JCR19_16055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCR19_16055 PF01612 3'-5' exonuclease JCR19_16060 PF02325 YGGT family JCR19_16065 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR19_16065 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR19_16070 PF01171 PP-loop family JCR19_16070 PF09179 TilS substrate binding domain JCR19_16070 PF11734 TilS substrate C-terminal domain JCR19_16075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCR19_16080 PF02541 Ppx/GppA phosphatase family JCR19_16085 PF00085 Thioredoxin JCR19_16090 PF07498 Rho termination factor, N-terminal domain JCR19_16090 PF07497 Rho termination factor, RNA-binding domain JCR19_16090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR19_16105 PF00216 Bacterial DNA-binding protein JCR19_16110 PF03483 B3/4 domain JCR19_16110 PF03484 tRNA synthetase B5 domain JCR19_16110 PF01588 Putative tRNA binding domain JCR19_16110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCR19_16110 PF03147 Ferredoxin-fold anticodon binding domain JCR19_16115 PF01409 tRNA synthetases class II core domain (F) JCR19_16115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCR19_16135 PF00453 Ribosomal protein L20 JCR19_16140 PF01632 Ribosomal protein L35 JCR19_16145 PF07690 Major Facilitator Superfamily JCR19_16150 PF09335 SNARE associated Golgi protein JCR19_16155 PF00043 Glutathione S-transferase, C-terminal domain JCR19_16155 PF02798 Glutathione S-transferase, N-terminal domain JCR19_16160 PF00707 Translation initiation factor IF-3, C-terminal domain JCR19_16160 PF05198 Translation initiation factor IF-3, N-terminal domain JCR19_16165 PF03129 Anticodon binding domain JCR19_16165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR19_16165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR19_16165 PF02824 TGS domain JCR19_16170 PF00501 AMP-binding enzyme JCR19_16170 PF13193 AMP-binding enzyme C-terminal domain JCR19_16175 PF04751 Protein of unknown function (DUF615) JCR19_16180 PF00381 PTS HPr component phosphorylation site JCR19_16185 PF03668 P-loop ATPase protein family JCR19_16190 PF02569 Pantoate-beta-alanine ligase JCR19_16195 PF02548 Ketopantoate hydroxymethyltransferase JCR19_16200 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCR19_16205 PF12626 Polymerase A arginine-rich C-terminus JCR19_16205 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR19_16205 PF01743 Poly A polymerase head domain JCR19_16215 PF03819 MazG nucleotide pyrophosphohydrolase domain JCR19_16225 PF02824 TGS domain JCR19_16225 PF13291 ACT domain JCR19_16225 PF04607 Region found in RelA / SpoT proteins JCR19_16230 PF05958 tRNA (Uracil-5-)-methyltransferase JCR19_16240 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_16245 PF00072 Response regulator receiver domain JCR19_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_16245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JCR19_16245 PF00512 His Kinase A (phospho-acceptor) domain JCR19_16245 PF00672 HAMP domain JCR19_16245 PF01627 Hpt domain JCR19_16250 PF00378 Enoyl-CoA hydratase/isomerase JCR19_16255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR19_16255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR19_16260 PF01261 Xylose isomerase-like TIM barrel JCR19_16270 PF00106 short chain dehydrogenase JCR19_16275 PF02233 NAD(P) transhydrogenase beta subunit JCR19_16280 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JCR19_16285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCR19_16285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCR19_16290 PF00892 EamA-like transporter family JCR19_16300 PF07690 Major Facilitator Superfamily JCR19_16305 PF01207 Dihydrouridine synthase (Dus) JCR19_16315 PF03466 LysR substrate binding domain JCR19_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_16325 PF00899 ThiF family JCR19_16335 PF00330 Aconitase family (aconitate hydratase) JCR19_16335 PF00694 Aconitase C-terminal domain JCR19_16340 PF01026 TatD related DNase JCR19_16355 PF16658 Class II release factor RF3, C-terminal domain JCR19_16355 PF03144 Elongation factor Tu domain 2 JCR19_16355 PF00009 Elongation factor Tu GTP binding domain JCR19_16375 PF00990 Diguanylate cyclase, GGDEF domain JCR19_16375 PF03707 Bacterial signalling protein N terminal repeat JCR19_16375 PF00563 EAL domain JCR19_16380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JCR19_16380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JCR19_16385 PF10369 Small subunit of acetolactate synthase JCR19_16390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR19_16390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR19_16390 PF00205 Thiamine pyrophosphate enzyme, central domain JCR19_16400 PF08264 Anticodon-binding domain of tRNA JCR19_16400 PF13603 Leucyl-tRNA synthetase, Domain 2 JCR19_16400 PF09334 tRNA synthetases class I (M) JCR19_16400 PF00133 tRNA synthetases class I (I, L, M and V) JCR19_16415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR19_16420 PF00005 ABC transporter JCR19_16420 PF02687 FtsX-like permease family JCR19_16420 PF12704 MacB-like periplasmic core domain JCR19_16425 PF02321 Outer membrane efflux protein JCR19_16440 PF00929 Exonuclease JCR19_16445 PF03193 RsgA GTPase JCR19_16455 PF00462 Glutaredoxin JCR19_16460 PF02556 Preprotein translocase subunit SecB JCR19_16475 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_16475 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_16490 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_16490 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_16500 PF04820 Tryptophan halogenase JCR19_16520 PF00221 Aromatic amino acid lyase JCR19_16535 PF13193 AMP-binding enzyme C-terminal domain JCR19_16535 PF00501 AMP-binding enzyme JCR19_16545 PF00550 Phosphopantetheine attachment site JCR19_16550 PF00550 Phosphopantetheine attachment site JCR19_16570 PF01926 50S ribosome-binding GTPase JCR19_16570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCR19_16575 PF13360 PQQ-like domain JCR19_16585 PF13393 Histidyl-tRNA synthetase JCR19_16585 PF03129 Anticodon binding domain JCR19_16590 PF04551 GcpE protein JCR19_16595 PF13464 Domain of unknown function (DUF4115) JCR19_16605 PF04055 Radical SAM superfamily JCR19_16610 PF00334 Nucleoside diphosphate kinase JCR19_16615 PF04384 Iron-sulphur cluster assembly JCR19_16620 PF01569 PAP2 superfamily JCR19_16625 PF13439 Glycosyltransferase Family 4 JCR19_16625 PF00534 Glycosyl transferases group 1 JCR19_16630 PF17804 Tail specific protease N-terminal domain JCR19_16630 PF03572 Peptidase family S41 JCR19_16630 PF00595 PDZ domain JCR19_16630 PF11818 C-terminal domain of tail specific protease (DUF3340) JCR19_16635 PF00933 Glycosyl hydrolase family 3 N terminal domain JCR19_16645 PF00561 alpha/beta hydrolase fold JCR19_16650 PF00171 Aldehyde dehydrogenase family JCR19_16655 PF00171 Aldehyde dehydrogenase family JCR19_16660 PF01202 Shikimate kinase JCR19_16665 PF02447 GntP family permease JCR19_16670 PF01081 KDPG and KHG aldolase JCR19_16675 PF00920 Dehydratase family JCR19_16685 PF00871 Acetokinase family JCR19_16690 PF07085 DRTGG domain JCR19_16690 PF01515 Phosphate acetyl/butaryl transferase JCR19_16695 PF05683 Fumarase C-terminus JCR19_16695 PF05681 Fumarate hydratase (Fumerase) JCR19_16710 PF07724 AAA domain (Cdc48 subfamily) JCR19_16710 PF10431 C-terminal, D2-small domain, of ClpB protein JCR19_16710 PF06689 ClpX C4-type zinc finger JCR19_16715 PF00574 Clp protease JCR19_16720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR19_16720 PF05697 Bacterial trigger factor protein (TF) JCR19_16720 PF05698 Bacterial trigger factor protein (TF) C-terminus JCR19_16725 PF07715 TonB-dependent Receptor Plug Domain JCR19_16725 PF00593 TonB dependent receptor JCR19_16730 PF13640 2OG-Fe(II) oxygenase superfamily JCR19_16730 PF18331 PKHD-type hydroxylase C-terminal domain JCR19_16735 PF08502 LeuA allosteric (dimerisation) domain JCR19_16735 PF00682 HMGL-like JCR19_16740 PF00561 alpha/beta hydrolase fold JCR19_16745 PF07021 Methionine biosynthesis protein MetW JCR19_16745 PF00561 alpha/beta hydrolase fold JCR19_16755 PF01725 Ham1 family JCR19_16765 PF02416 mttA/Hcf106 family JCR19_16770 PF02416 mttA/Hcf106 family JCR19_16775 PF00902 Sec-independent protein translocase protein (TatC) JCR19_16795 PF01790 Prolipoprotein diacylglyceryl transferase JCR19_16810 PF00303 Thymidylate synthase JCR19_16815 PF00186 Dihydrofolate reductase JCR19_16825 PF01625 Peptide methionine sulfoxide reductase JCR19_16835 PF01618 MotA/TolQ/ExbB proton channel family JCR19_16845 PF00551 Formyl transferase JCR19_16845 PF01842 ACT domain JCR19_16855 PF00171 Aldehyde dehydrogenase family JCR19_16860 PF00830 Ribosomal L28 family JCR19_16865 PF00471 Ribosomal protein L33 JCR19_16870 PF00999 Sodium/hydrogen exchanger family JCR19_16870 PF02254 TrkA-N domain JCR19_16890 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JCR19_16895 PF13361 UvrD-like helicase C-terminal domain JCR19_16895 PF00580 UvrD/REP helicase N-terminal domain JCR19_16910 PF08272 Topoisomerase I zinc-ribbon-like JCR19_16910 PF01131 DNA topoisomerase JCR19_16910 PF01751 Toprim domain JCR19_16910 PF01396 Topoisomerase DNA binding C4 zinc finger JCR19_16920 PF01638 HxlR-like helix-turn-helix JCR19_16925 PF00107 Zinc-binding dehydrogenase JCR19_16925 PF08240 Alcohol dehydrogenase GroES-like domain JCR19_16930 PF04102 SlyX JCR19_16935 PF16326 ABC transporter C-terminal domain JCR19_16935 PF00005 ABC transporter JCR19_16935 PF12848 ABC transporter JCR19_16940 PF01810 LysE type translocator JCR19_16945 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR19_16955 PF00375 Sodium:dicarboxylate symporter family JCR19_16965 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR19_16965 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR19_16985 PF01416 tRNA pseudouridine synthase JCR19_16995 PF01176 Translation initiation factor 1A / IF-1 JCR19_17010 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR19_17020 PF00694 Aconitase C-terminal domain JCR19_17025 PF00330 Aconitase family (aconitate hydratase) JCR19_17035 PF03466 LysR substrate binding domain JCR19_17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_17055 PF00905 Penicillin binding protein transpeptidase domain JCR19_17075 PF13614 AAA domain JCR19_17080 PF10544 T5orf172 domain JCR19_17105 PF00293 NUDIX domain JCR19_17110 PF02896 PEP-utilising enzyme, TIM barrel domain JCR19_17110 PF00391 PEP-utilising enzyme, mobile domain JCR19_17110 PF05524 PEP-utilising enzyme, N-terminal JCR19_17110 PF01590 GAF domain JCR19_17115 PF00141 Peroxidase JCR19_17120 PF12706 Beta-lactamase superfamily domain JCR19_17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_17125 PF03466 LysR substrate binding domain JCR19_17135 PF02798 Glutathione S-transferase, N-terminal domain JCR19_17140 PF13280 WYL domain JCR19_17140 PF08279 HTH domain JCR19_17145 PF13419 Haloacid dehalogenase-like hydrolase JCR19_17150 PF01479 S4 domain JCR19_17150 PF00849 RNA pseudouridylate synthase JCR19_17155 PF10150 Ribonuclease E/G family JCR19_17155 PF00575 S1 RNA binding domain JCR19_17155 PF12111 Polyribonucleotide phosphorylase C terminal JCR19_17160 PF00501 AMP-binding enzyme JCR19_17160 PF13193 AMP-binding enzyme C-terminal domain JCR19_17175 PF03466 LysR substrate binding domain JCR19_17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR19_17180 PF00106 short chain dehydrogenase JCR19_17185 PF06969 HemN C-terminal domain JCR19_17185 PF04055 Radical SAM superfamily JCR19_17195 PF01554 MatE JCR19_17200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR19_17200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_17200 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_17205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR19_17205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_17210 PF03109 ABC1 family JCR19_17215 PF01197 Ribosomal protein L31 JCR19_17230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JCR19_17250 PF03884 DNA gyrase inhibitor YacG JCR19_17255 PF00753 Metallo-beta-lactamase superfamily JCR19_17260 PF00762 Ferrochelatase JCR19_17270 PF01177 Asp/Glu/Hydantoin racemase JCR19_17285 PF01206 Sulfurtransferase TusA JCR19_17290 PF03471 Transporter associated domain JCR19_17290 PF00571 CBS domain JCR19_17295 PF00795 Carbon-nitrogen hydrolase JCR19_17300 PF01588 Putative tRNA binding domain JCR19_17310 PF07963 Prokaryotic N-terminal methylation motif JCR19_17310 PF08334 Type II secretion system (T2SS), protein G JCR19_17315 PF00482 Type II secretion system (T2SS), protein F JCR19_17320 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCR19_17320 PF18074 Primosomal protein N C-terminal domain JCR19_17320 PF17764 3′ DNA-binding domain (3′BD) JCR19_17320 PF00271 Helicase conserved C-terminal domain JCR19_17320 PF00270 DEAD/DEAH box helicase JCR19_17325 PF02254 TrkA-N domain JCR19_17325 PF00999 Sodium/hydrogen exchanger family JCR19_17330 PF01430 Hsp33 protein JCR19_17340 PF00226 DnaJ domain JCR19_17340 PF01556 DnaJ C terminal domain JCR19_17350 PF01544 CorA-like Mg2+ transporter protein JCR19_17355 PF00013 KH domain JCR19_17355 PF00575 S1 RNA binding domain JCR19_17355 PF03725 3' exoribonuclease family, domain 2 JCR19_17355 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCR19_17355 PF01138 3' exoribonuclease family, domain 1 JCR19_17360 PF00312 Ribosomal protein S15 JCR19_17365 PF00144 Beta-lactamase JCR19_17370 PF13538 UvrD-like helicase C-terminal domain JCR19_17375 PF00580 UvrD/REP helicase N-terminal domain JCR19_17375 PF12705 PD-(D/E)XK nuclease superfamily JCR19_17375 PF13361 UvrD-like helicase C-terminal domain JCR19_17380 PF17946 RecC C-terminal domain JCR19_17390 PF03976 Polyphosphate kinase 2 (PPK2) JCR19_17400 PF01209 ubiE/COQ5 methyltransferase family JCR19_17410 PF03109 ABC1 family JCR19_17415 PF01494 FAD binding domain JCR19_17420 PF01502 Phosphoribosyl-AMP cyclohydrolase JCR19_17435 PF13244 Domain of unknown function (DUF4040) JCR19_17435 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JCR19_17435 PF00361 Proton-conducting membrane transporter JCR19_17435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR19_17440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR19_17445 PF00361 Proton-conducting membrane transporter JCR19_17450 PF01899 Na+/H+ ion antiporter subunit JCR19_17455 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JCR19_17460 PF03334 Na+/H+ antiporter subunit JCR19_17465 PF02033 Ribosome-binding factor A JCR19_17470 PF00009 Elongation factor Tu GTP binding domain JCR19_17470 PF11987 Translation-initiation factor 2 JCR19_17470 PF08364 Bacterial translation initiation factor IF-2 associated region JCR19_17470 PF04760 Translation initiation factor IF-2, N-terminal region JCR19_17475 PF00575 S1 RNA binding domain JCR19_17475 PF13184 NusA-like KH domain JCR19_17475 PF08529 NusA N-terminal domain JCR19_17480 PF02576 RimP N-terminal domain JCR19_17480 PF17384 RimP C-terminal SH3 domain JCR19_17500 PF03840 Preprotein translocase SecG subunit JCR19_17505 PF00121 Triosephosphate isomerase JCR19_17510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR19_17510 PF00437 Type II/IV secretion system protein JCR19_17515 PF00482 Type II secretion system (T2SS), protein F JCR19_17520 PF06750 Bacterial Peptidase A24 N-terminal domain JCR19_17520 PF01478 Type IV leader peptidase family JCR19_17525 PF01121 Dephospho-CoA kinase JCR19_17535 PF00588 SpoU rRNA Methylase family JCR19_17535 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR19_17540 PF06865 Pyrimidine/purine nucleoside phosphorylase JCR19_17550 PF02463 RecF/RecN/SMC N terminal domain JCR19_17555 PF02622 Uncharacterized ACR, COG1678 JCR19_17560 PF03652 Holliday junction resolvase JCR19_17565 PF13533 Biotin-lipoyl like JCR19_17590 PF02805 Metal binding domain of Ada JCR19_17590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR19_17590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR19_17590 PF12833 Helix-turn-helix domain JCR19_17595 PF01066 CDP-alcohol phosphatidyltransferase JCR19_17605 PF08459 UvrC Helix-hairpin-helix N-terminal JCR19_17605 PF02151 UvrB/uvrC motif JCR19_17605 PF01541 GIY-YIG catalytic domain JCR19_17625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR19_17625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR19_17625 PF00378 Enoyl-CoA hydratase/isomerase JCR19_17630 PF00108 Thiolase, N-terminal domain JCR19_17630 PF02803 Thiolase, C-terminal domain JCR19_17650 PF09278 MerR, DNA binding JCR19_17650 PF00376 MerR family regulatory protein JCR19_17660 PF01323 DSBA-like thioredoxin domain JCR19_17675 PF00183 Hsp90 protein JCR19_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_17690 PF03553 Na+/H+ antiporter family JCR19_17690 PF13726 Na+-H+ antiporter family JCR19_17695 PF00561 alpha/beta hydrolase fold JCR19_17715 PF04997 RNA polymerase Rpb1, domain 1 JCR19_17715 PF00623 RNA polymerase Rpb1, domain 2 JCR19_17715 PF04983 RNA polymerase Rpb1, domain 3 JCR19_17715 PF05000 RNA polymerase Rpb1, domain 4 JCR19_17715 PF04998 RNA polymerase Rpb1, domain 5 JCR19_17720 PF04565 RNA polymerase Rpb2, domain 3 JCR19_17720 PF04563 RNA polymerase beta subunit JCR19_17720 PF04561 RNA polymerase Rpb2, domain 2 JCR19_17720 PF00562 RNA polymerase Rpb2, domain 6 JCR19_17720 PF04560 RNA polymerase Rpb2, domain 7 JCR19_17720 PF10385 RNA polymerase beta subunit external 1 domain JCR19_17725 PF00542 Ribosomal protein L7/L12 C-terminal domain JCR19_17725 PF16320 Ribosomal protein L7/L12 dimerisation domain JCR19_17730 PF00466 Ribosomal protein L10 JCR19_17735 PF00687 Ribosomal protein L1p/L10e family JCR19_17740 PF00298 Ribosomal protein L11, RNA binding domain JCR19_17740 PF03946 Ribosomal protein L11, N-terminal domain JCR19_17745 PF00467 KOW motif JCR19_17745 PF02357 Transcription termination factor nusG JCR19_17750 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCR19_17760 PF00009 Elongation factor Tu GTP binding domain JCR19_17760 PF03143 Elongation factor Tu C-terminal domain JCR19_17760 PF03144 Elongation factor Tu domain 2 JCR19_17785 PF00425 chorismate binding enzyme JCR19_17785 PF04715 Anthranilate synthase component I, N terminal region JCR19_17790 PF13419 Haloacid dehalogenase-like hydrolase JCR19_17795 PF00498 FHA domain JCR19_17795 PF12401 Protein of unknown function (DUF2662) JCR19_17800 PF00263 Bacterial type II and III secretion system protein JCR19_17800 PF03958 Bacterial type II/III secretion system short domain JCR19_17815 PF00816 H-NS histone family JCR19_17840 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JCR19_17840 PF03900 Porphobilinogen deaminase, C-terminal domain JCR19_17845 PF00072 Response regulator receiver domain JCR19_17845 PF04397 LytTr DNA-binding domain JCR19_17850 PF07694 5TMR of 5TMR-LYT JCR19_17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_17850 PF06580 Histidine kinase JCR19_17855 PF00206 Lyase JCR19_17855 PF14698 Argininosuccinate lyase C-terminal JCR19_17860 PF04362 Bacterial Fe(2+) trafficking JCR19_17865 PF01895 PhoU domain JCR19_17870 PF02321 Outer membrane efflux protein JCR19_17875 PF00892 EamA-like transporter family JCR19_17890 PF13667 ThiC-associated domain JCR19_17890 PF01964 Radical SAM ThiC family JCR19_17895 PF00293 NUDIX domain JCR19_17900 PF00149 Calcineurin-like phosphoesterase JCR19_17905 PF01258 Prokaryotic dksA/traR C4-type zinc finger JCR19_17910 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR19_17915 PF01098 Cell cycle protein JCR19_17920 PF08245 Mur ligase middle domain JCR19_17920 PF02875 Mur ligase family, glutamate ligase domain JCR19_17930 PF02421 Ferrous iron transport protein B JCR19_17930 PF07670 Nucleoside recognition JCR19_17930 PF07664 Ferrous iron transport protein B C terminus JCR19_17940 PF02899 Phage integrase, N-terminal SAM-like domain JCR19_17940 PF00589 Phage integrase family JCR19_17945 PF13098 Thioredoxin-like domain JCR19_17945 PF10411 Disulfide bond isomerase protein N-terminus JCR19_17950 PF01842 ACT domain JCR19_17950 PF00742 Homoserine dehydrogenase JCR19_17950 PF03447 Homoserine dehydrogenase, NAD binding domain JCR19_17955 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_17960 PF00768 D-alanyl-D-alanine carboxypeptidase JCR19_17965 PF00072 Response regulator receiver domain JCR19_17965 PF00196 Bacterial regulatory proteins, luxR family JCR19_17970 PF00512 His Kinase A (phospho-acceptor) domain JCR19_17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR19_17975 PF02954 Bacterial regulatory protein, Fis family JCR19_17975 PF00072 Response regulator receiver domain JCR19_17975 PF00158 Sigma-54 interaction domain JCR19_17980 PF03572 Peptidase family S41 JCR19_17980 PF00595 PDZ domain JCR19_17985 PF01676 Metalloenzyme superfamily JCR19_17985 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JCR19_17990 PF03739 Lipopolysaccharide export system permease LptF/LptG JCR19_18000 PF00883 Cytosol aminopeptidase family, catalytic domain JCR19_18000 PF02789 Cytosol aminopeptidase family, N-terminal domain JCR19_18020 PF00677 Lumazine binding domain JCR19_18030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCR19_18030 PF01872 RibD C-terminal domain JCR19_18035 PF03477 ATP cone domain JCR19_18040 PF00909 Ammonium Transporter Family JCR19_18045 PF00543 Nitrogen regulatory protein P-II JCR19_18055 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR19_18055 PF01078 Magnesium chelatase, subunit ChlI JCR19_18065 PF01740 STAS domain JCR19_18065 PF00916 Sulfate permease family JCR19_18070 PF00582 Universal stress protein family JCR19_18090 PF00665 Integrase core domain JCR19_18100 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR19_18100 PF01078 Magnesium chelatase, subunit ChlI JCR19_18105 PF00392 Bacterial regulatory proteins, gntR family JCR19_18105 PF00155 Aminotransferase class I and II JCR19_18115 PF00701 Dihydrodipicolinate synthetase family JCR19_18125 PF03573 outer membrane porin, OprD family JCR19_18130 PF00719 Inorganic pyrophosphatase JCR19_18145 PF00501 AMP-binding enzyme JCR19_18145 PF13193 AMP-binding enzyme C-terminal domain JCR19_18150 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR19_18150 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR19_18155 PF07690 Major Facilitator Superfamily JCR19_18160 PF03458 UPF0126 domain JCR19_18165 PF02810 SEC-C motif JCR19_18170 PF03741 Integral membrane protein TerC family JCR19_18170 PF03471 Transporter associated domain JCR19_18175 PF03641 Possible lysine decarboxylase JCR19_18180 PF07690 Major Facilitator Superfamily JCR19_18190 PF00817 impB/mucB/samB family JCR19_18190 PF11799 impB/mucB/samB family C-terminal domain JCR19_18190 PF11798 IMS family HHH motif JCR19_18205 PF08497 Radical SAM N-terminal JCR19_18205 PF04055 Radical SAM superfamily JCR19_18205 PF11842 Domain of unknown function (DUF3362) JCR19_18225 PF03358 NADPH-dependent FMN reductase JCR19_18235 PF00291 Pyridoxal-phosphate dependent enzyme JCR19_18270 PF00440 Bacterial regulatory proteins, tetR family JCR19_18295 PF01327 Polypeptide deformylase JCR19_18305 PF17782 DprA winged helix domain JCR19_18305 PF02481 DNA recombination-mediator protein A JCR19_18310 PF01300 Telomere recombination JCR19_18315 PF00892 EamA-like transporter family JCR19_18320 PF00440 Bacterial regulatory proteins, tetR family JCR19_18325 PF07690 Major Facilitator Superfamily JCR19_18335 PF00255 Glutathione peroxidase JCR19_18345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCR19_18350 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR19_18350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR19_18355 PF00231 ATP synthase JCR19_18360 PF00306 ATP synthase alpha/beta chain, C terminal domain JCR19_18360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR19_18360 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR19_18365 PF00213 ATP synthase delta (OSCP) subunit JCR19_18370 PF00430 ATP synthase B/B' CF(0) JCR19_18375 PF00137 ATP synthase subunit C JCR19_18380 PF00119 ATP synthase A chain JCR19_18400 PF00005 ABC transporter JCR19_18405 PF00950 ABC 3 transport family JCR19_18410 PF01810 LysE type translocator JCR19_18415 PF04261 Dyp-type peroxidase family JCR19_18420 PF00390 Malic enzyme, N-terminal domain JCR19_18420 PF03949 Malic enzyme, NAD binding domain JCR19_18425 PF03485 Arginyl tRNA synthetase N terminal domain JCR19_18425 PF05746 DALR anticodon binding domain JCR19_18425 PF00750 tRNA synthetases class I (R) JCR19_18445 PF02678 Pirin JCR19_18445 PF05726 Pirin C-terminal cupin domain JCR19_18455 PF03551 Transcriptional regulator PadR-like family JCR19_18460 PF01909 Nucleotidyltransferase domain JCR19_18460 PF13427 Domain of unknown function (DUF4111) JCR19_18465 PF00958 GMP synthase C terminal domain JCR19_18465 PF00117 Glutamine amidotransferase class-I JCR19_18465 PF02540 NAD synthase JCR19_18470 PF04286 Protein of unknown function (DUF445) JCR19_18475 PF07681 DoxX JCR19_18480 PF09335 SNARE associated Golgi protein JCR19_18495 PF13614 AAA domain JCR19_18505 PF01722 BolA-like protein JCR19_18520 PF01648 4'-phosphopantetheinyl transferase superfamily JCR19_18525 PF16363 GDP-mannose 4,6 dehydratase JCR19_18540 PF13193 AMP-binding enzyme C-terminal domain JCR19_18540 PF00668 Condensation domain JCR19_18540 PF00975 Thioesterase domain JCR19_18540 PF00550 Phosphopantetheine attachment site JCR19_18540 PF00501 AMP-binding enzyme JCR19_18545 PF00550 Phosphopantetheine attachment site JCR19_18545 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_18545 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_18545 PF08659 KR domain JCR19_18545 PF14765 Polyketide synthase dehydratase JCR19_18545 PF16197 Ketoacyl-synthetase C-terminal extension JCR19_18545 PF00668 Condensation domain JCR19_18545 PF13193 AMP-binding enzyme C-terminal domain JCR19_18545 PF00501 AMP-binding enzyme JCR19_18550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_18550 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_18550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_18555 PF00501 AMP-binding enzyme JCR19_18560 PF13737 Transposase DDE domain JCR19_18565 PF00196 Bacterial regulatory proteins, luxR family JCR19_18565 PF03472 Autoinducer binding domain JCR19_18575 PF00765 Autoinducer synthase JCR19_18580 PF07690 Major Facilitator Superfamily JCR19_18580 PF00083 Sugar (and other) transporter JCR19_18585 PF00378 Enoyl-CoA hydratase/isomerase JCR19_18590 PF00378 Enoyl-CoA hydratase/isomerase JCR19_18595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR19_18595 PF02770 Acyl-CoA dehydrogenase, middle domain JCR19_18595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR19_18600 PF00501 AMP-binding enzyme JCR19_18600 PF13193 AMP-binding enzyme C-terminal domain JCR19_18605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR19_18605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR19_18610 PF00171 Aldehyde dehydrogenase family JCR19_18620 PF00324 Amino acid permease JCR19_18625 PF00324 Amino acid permease JCR19_18630 PF01042 Endoribonuclease L-PSP JCR19_18635 PF00842 Alanine racemase, C-terminal domain JCR19_18635 PF01168 Alanine racemase, N-terminal domain JCR19_18640 PF01266 FAD dependent oxidoreductase JCR19_18645 PF01037 Lrp/AsnC ligand binding domain JCR19_18655 PF07715 TonB-dependent Receptor Plug Domain JCR19_18655 PF00593 TonB dependent receptor JCR19_18670 PF00849 RNA pseudouridylate synthase JCR19_18695 PF04717 Type VI secretion system, phage-baseplate injector JCR19_18695 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR19_18695 PF13296 Putative type VI secretion system Rhs element Vgr JCR19_18700 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR19_18700 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR19_18735 PF00694 Aconitase C-terminal domain JCR19_18735 PF00330 Aconitase family (aconitate hydratase) JCR19_18740 PF00285 Citrate synthase, C-terminal domain JCR19_18750 PF00392 Bacterial regulatory proteins, gntR family JCR19_18750 PF07729 FCD domain JCR19_18760 PF00155 Aminotransferase class I and II JCR19_18765 PF09330 D-lactate dehydrogenase, membrane binding JCR19_18765 PF01565 FAD binding domain JCR19_18770 PF01070 FMN-dependent dehydrogenase JCR19_18775 PF00392 Bacterial regulatory proteins, gntR family JCR19_18775 PF07729 FCD domain JCR19_18780 PF02652 L-lactate permease JCR19_18785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR19_18785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR19_18785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR19_18785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR19_18790 PF16363 GDP-mannose 4,6 dehydratase JCR19_18795 PF00342 Phosphoglucose isomerase JCR19_18800 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR19_18800 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR19_18800 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR19_18805 PF00483 Nucleotidyl transferase JCR19_18810 PF02397 Bacterial sugar transferase JCR19_18815 PF00953 Glycosyl transferase family 4 JCR19_18820 PF01370 NAD dependent epimerase/dehydratase family JCR19_18825 PF13579 Glycosyl transferase 4-like domain JCR19_18830 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR19_18835 PF01370 NAD dependent epimerase/dehydratase family JCR19_18840 PF02719 Polysaccharide biosynthesis protein JCR19_18840 PF08485 Polysaccharide biosynthesis protein C-terminal JCR19_18860 PF00132 Bacterial transferase hexapeptide (six repeats) JCR19_18870 PF01370 NAD dependent epimerase/dehydratase family JCR19_18875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR19_18875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR19_18875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR19_18880 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JCR19_18880 PF10531 SLBB domain JCR19_18880 PF02563 Polysaccharide biosynthesis/export protein JCR19_18885 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR19_18890 PF02706 Chain length determinant protein JCR19_18890 PF13614 AAA domain JCR19_18890 PF13807 G-rich domain on putative tyrosine kinase JCR19_18895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR19_18895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR19_18900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR19_18900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR19_18905 PF03023 Lipid II flippase MurJ JCR19_18910 PF01510 N-acetylmuramoyl-L-alanine amidase JCR19_18915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JCR19_18915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JCR19_18930 PF01138 3' exoribonuclease family, domain 1 JCR19_18930 PF03725 3' exoribonuclease family, domain 2 JCR19_18935 PF00487 Fatty acid desaturase JCR19_18940 PF00175 Oxidoreductase NAD-binding domain JCR19_18945 PF00440 Bacterial regulatory proteins, tetR family JCR19_18950 PF08360 QacR-like protein, C-terminal region JCR19_18950 PF00440 Bacterial regulatory proteins, tetR family JCR19_18955 PF01323 DSBA-like thioredoxin domain JCR19_18965 PF13419 Haloacid dehalogenase-like hydrolase JCR19_18970 PF00106 short chain dehydrogenase JCR19_18985 PF00583 Acetyltransferase (GNAT) family JCR19_18985 PF00696 Amino acid kinase family JCR19_18990 PF09084 NMT1/THI5 like JCR19_18995 PF09084 NMT1/THI5 like JCR19_19000 PF00296 Luciferase-like monooxygenase JCR19_19005 PF00528 Binding-protein-dependent transport system inner membrane component JCR19_19010 PF00005 ABC transporter JCR19_19015 PF08362 YcdC-like protein, C-terminal region JCR19_19015 PF00440 Bacterial regulatory proteins, tetR family JCR19_19020 PF01048 Phosphorylase superfamily JCR19_19030 PF01687 Riboflavin kinase JCR19_19030 PF06574 FAD synthetase JCR19_19035 PF00133 tRNA synthetases class I (I, L, M and V) JCR19_19035 PF06827 Zinc finger found in FPG and IleRS JCR19_19035 PF08264 Anticodon-binding domain of tRNA JCR19_19040 PF01252 Signal peptidase (SPase) II JCR19_19045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR19_19085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR19_19090 PF07859 alpha/beta hydrolase fold JCR19_19115 PF01025 GrpE JCR19_19120 PF00012 Hsp70 protein JCR19_19140 PF13406 Transglycosylase SLT domain JCR19_19145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCR19_19145 PF02222 ATP-grasp domain JCR19_19150 PF00731 AIR carboxylase JCR19_19160 PF01225 Mur ligase family, catalytic domain JCR19_19160 PF08245 Mur ligase middle domain JCR19_19160 PF02875 Mur ligase family, glutamate ligase domain JCR19_19170 PF01569 PAP2 superfamily JCR19_19175 PF03741 Integral membrane protein TerC family JCR19_19185 PF03738 Glutathionylspermidine synthase preATP-grasp JCR19_19190 PF00355 Rieske [2Fe-2S] domain JCR19_19195 PF01979 Amidohydrolase family JCR19_19200 PF00156 Phosphoribosyl transferase domain JCR19_19210 PF13098 Thioredoxin-like domain JCR19_19210 PF10411 Disulfide bond isomerase protein N-terminus JCR19_19215 PF01545 Cation efflux family JCR19_19215 PF16916 Dimerisation domain of Zinc Transporter JCR19_19220 PF02583 Metal-sensitive transcriptional repressor JCR19_19225 PF10396 GTP-binding protein TrmE N-terminus JCR19_19225 PF12631 MnmE helical domain JCR19_19225 PF01926 50S ribosome-binding GTPase JCR19_19230 PF02096 60Kd inner membrane protein JCR19_19230 PF14849 YidC periplasmic domain JCR19_19235 PF01809 Putative membrane protein insertion efficiency factor JCR19_19300 PF13614 AAA domain JCR19_19305 PF02195 ParB-like nuclease domain JCR19_19305 PF17762 HTH domain found in ParB protein JCR19_19325 PF05816 Toxic anion resistance protein (TelA) JCR19_19420 PF00226 DnaJ domain JCR19_19420 PF00684 DnaJ central domain JCR19_19420 PF01556 DnaJ C terminal domain JCR19_19455 PF18272 single-stranded DNA binding TraI N-terminal subdomain JCR19_19455 PF07057 DNA helicase TraI JCR19_19455 PF18340 DNA relaxase TraI 2B/2B-like domain JCR19_19455 PF08751 TrwC relaxase JCR19_19495 PF00239 Resolvase, N terminal domain JCR19_19495 PF02796 Helix-turn-helix domain of resolvase JCR19_19510 PF01464 Transglycosylase SLT domain JCR19_19545 PF10411 Disulfide bond isomerase protein N-terminus JCR19_19545 PF13098 Thioredoxin-like domain JCR19_19580 PF06834 TraU protein JCR19_19590 PF06986 Type-1V conjugative transfer system mating pair stabilisation JCR19_19605 PF06122 Conjugative relaxosome accessory transposon protein JCR19_19625 PF13438 Domain of unknown function (DUF4113) JCR19_19625 PF00817 impB/mucB/samB family JCR19_19625 PF11799 impB/mucB/samB family C-terminal domain JCR19_19715 PF00565 Staphylococcal nuclease homologue JCR19_19740 PF07715 TonB-dependent Receptor Plug Domain JCR19_19740 PF00593 TonB dependent receptor