locus-tag class description KAB01_00001 PF00005 ABC transporter KAB01_00001 PF12848 ABC transporter KAB01_00002 PF09335 SNARE associated Golgi protein KAB01_00004 PF00204 DNA gyrase B KAB01_00004 PF00986 DNA gyrase B subunit, carboxyl terminus KAB01_00004 PF18053 DNA gyrase B subunit insert domain KAB01_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00004 PF01751 Toprim domain KAB01_00005 PF02463 RecF/RecN/SMC N terminal domain KAB01_00006 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB01_00006 PF02767 DNA polymerase III beta subunit, central domain KAB01_00006 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB01_00007 PF00308 Bacterial dnaA protein KAB01_00007 PF08299 Bacterial dnaA protein helix-turn-helix KAB01_00007 PF11638 DnaA N-terminal domain KAB01_00008 PF00468 Ribosomal protein L34 KAB01_00009 PF00825 Ribonuclease P KAB01_00010 PF01809 Putative membrane protein insertion efficiency factor KAB01_00011 PF02096 60Kd inner membrane protein KAB01_00011 PF14849 YidC periplasmic domain KAB01_00012 PF01926 50S ribosome-binding GTPase KAB01_00012 PF10396 GTP-binding protein TrmE N-terminus KAB01_00012 PF12631 MnmE helical domain KAB01_00013 PF02583 Metal-sensitive transcriptional repressor KAB01_00014 PF16916 Dimerisation domain of Zinc Transporter KAB01_00014 PF01545 Cation efflux family KAB01_00015 PF13098 Thioredoxin-like domain KAB01_00015 PF10411 Disulfide bond isomerase protein N-terminus KAB01_00017 PF00156 Phosphoribosyl transferase domain KAB01_00019 PF01979 Amidohydrolase family KAB01_00020 PF00355 Rieske [2Fe-2S] domain KAB01_00021 PF03738 Glutathionylspermidine synthase preATP-grasp KAB01_00023 PF03741 Integral membrane protein TerC family KAB01_00024 PF01569 PAP2 superfamily KAB01_00026 PF01225 Mur ligase family, catalytic domain KAB01_00026 PF08245 Mur ligase middle domain KAB01_00026 PF02875 Mur ligase family, glutamate ligase domain KAB01_00028 PF00731 AIR carboxylase KAB01_00029 PF02222 ATP-grasp domain KAB01_00029 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KAB01_00030 PF13406 Transglycosylase SLT domain KAB01_00034 PF00012 Hsp70 protein KAB01_00035 PF01025 GrpE KAB01_00036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00036 PF03466 LysR substrate binding domain KAB01_00041 PF07859 alpha/beta hydrolase fold KAB01_00042 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB01_00049 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB01_00050 PF01252 Signal peptidase (SPase) II KAB01_00051 PF00133 tRNA synthetases class I (I, L, M and V) KAB01_00051 PF06827 Zinc finger found in FPG and IleRS KAB01_00051 PF08264 Anticodon-binding domain of tRNA KAB01_00052 PF06574 FAD synthetase KAB01_00052 PF01687 Riboflavin kinase KAB01_00054 PF01048 Phosphorylase superfamily KAB01_00055 PF08362 YcdC-like protein, C-terminal region KAB01_00055 PF00440 Bacterial regulatory proteins, tetR family KAB01_00056 PF00005 ABC transporter KAB01_00057 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_00058 PF00296 Luciferase-like monooxygenase KAB01_00059 PF09084 NMT1/THI5 like KAB01_00060 PF09084 NMT1/THI5 like KAB01_00061 PF00696 Amino acid kinase family KAB01_00061 PF00583 Acetyltransferase (GNAT) family KAB01_00064 PF00106 short chain dehydrogenase KAB01_00065 PF13419 Haloacid dehalogenase-like hydrolase KAB01_00067 PF01323 DSBA-like thioredoxin domain KAB01_00068 PF08360 QacR-like protein, C-terminal region KAB01_00068 PF00440 Bacterial regulatory proteins, tetR family KAB01_00069 PF00440 Bacterial regulatory proteins, tetR family KAB01_00070 PF00175 Oxidoreductase NAD-binding domain KAB01_00071 PF00487 Fatty acid desaturase KAB01_00072 PF03725 3' exoribonuclease family, domain 2 KAB01_00072 PF01138 3' exoribonuclease family, domain 1 KAB01_00073 PF04185 Phosphoesterase family KAB01_00073 PF05506 Domain of unknown function (DUF756) KAB01_00075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KAB01_00075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KAB01_00076 PF01510 N-acetylmuramoyl-L-alanine amidase KAB01_00077 PF03023 Lipid II flippase MurJ KAB01_00078 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB01_00078 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB01_00079 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB01_00079 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB01_00080 PF02706 Chain length determinant protein KAB01_00080 PF13807 G-rich domain on putative tyrosine kinase KAB01_00080 PF13614 AAA domain KAB01_00081 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB01_00082 PF02563 Polysaccharide biosynthesis/export protein KAB01_00082 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KAB01_00082 PF10531 SLBB domain KAB01_00083 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB01_00083 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB01_00083 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB01_00084 PF02719 Polysaccharide biosynthesis protein KAB01_00085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAB01_00086 PF02348 Cytidylyltransferase KAB01_00089 PF03102 NeuB family KAB01_00089 PF08666 SAF domain KAB01_00090 PF01943 Polysaccharide biosynthesis protein KAB01_00091 PF07922 Glycosyltransferase family 52 KAB01_00094 PF00535 Glycosyl transferase family 2 KAB01_00095 PF02397 Bacterial sugar transferase KAB01_00096 PF00483 Nucleotidyl transferase KAB01_00097 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB01_00097 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB01_00097 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB01_00098 PF00342 Phosphoglucose isomerase KAB01_00099 PF16363 GDP-mannose 4,6 dehydratase KAB01_00100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB01_00100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB01_00100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB01_00100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB01_00101 PF02652 L-lactate permease KAB01_00102 PF07729 FCD domain KAB01_00102 PF00392 Bacterial regulatory proteins, gntR family KAB01_00103 PF01070 FMN-dependent dehydrogenase KAB01_00104 PF01565 FAD binding domain KAB01_00104 PF09330 D-lactate dehydrogenase, membrane binding KAB01_00105 PF00155 Aminotransferase class I and II KAB01_00106 PF07729 FCD domain KAB01_00106 PF00392 Bacterial regulatory proteins, gntR family KAB01_00108 PF00285 Citrate synthase, C-terminal domain KAB01_00109 PF00694 Aconitase C-terminal domain KAB01_00109 PF00330 Aconitase family (aconitate hydratase) KAB01_00112 PF00293 NUDIX domain KAB01_00116 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_00116 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_00119 PF00849 RNA pseudouridylate synthase KAB01_00122 PF00593 TonB dependent receptor KAB01_00122 PF07715 TonB-dependent Receptor Plug Domain KAB01_00124 PF01037 Lrp/AsnC ligand binding domain KAB01_00125 PF01266 FAD dependent oxidoreductase KAB01_00126 PF00842 Alanine racemase, C-terminal domain KAB01_00126 PF01168 Alanine racemase, N-terminal domain KAB01_00127 PF01042 Endoribonuclease L-PSP KAB01_00128 PF00324 Amino acid permease KAB01_00129 PF00324 Amino acid permease KAB01_00131 PF00171 Aldehyde dehydrogenase family KAB01_00132 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB01_00132 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB01_00133 PF13193 AMP-binding enzyme C-terminal domain KAB01_00133 PF00501 AMP-binding enzyme KAB01_00134 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_00134 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_00134 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_00135 PF00378 Enoyl-CoA hydratase/isomerase KAB01_00136 PF00378 Enoyl-CoA hydratase/isomerase KAB01_00137 PF00083 Sugar (and other) transporter KAB01_00137 PF07690 Major Facilitator Superfamily KAB01_00138 PF00765 Autoinducer synthase KAB01_00140 PF00196 Bacterial regulatory proteins, luxR family KAB01_00140 PF03472 Autoinducer binding domain KAB01_00141 PF13737 Transposase DDE domain KAB01_00142 PF13737 Transposase DDE domain KAB01_00143 PF00501 AMP-binding enzyme KAB01_00144 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_00144 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_00144 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_00145 PF16197 Ketoacyl-synthetase C-terminal extension KAB01_00145 PF14765 Polyketide synthase dehydratase KAB01_00145 PF00550 Phosphopantetheine attachment site KAB01_00145 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_00145 PF08242 Methyltransferase domain KAB01_00145 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_00145 PF00975 Thioesterase domain KAB01_00146 PF00550 Phosphopantetheine attachment site KAB01_00146 PF00668 Condensation domain KAB01_00146 PF00501 AMP-binding enzyme KAB01_00146 PF13193 AMP-binding enzyme C-terminal domain KAB01_00146 PF00975 Thioesterase domain KAB01_00149 PF12697 Alpha/beta hydrolase family KAB01_00150 PF01648 4'-phosphopantetheinyl transferase superfamily KAB01_00153 PF01722 BolA-like protein KAB01_00155 PF13614 AAA domain KAB01_00158 PF09335 SNARE associated Golgi protein KAB01_00159 PF07681 DoxX KAB01_00160 PF04286 Protein of unknown function (DUF445) KAB01_00161 PF02540 NAD synthase KAB01_00161 PF00958 GMP synthase C terminal domain KAB01_00161 PF00117 Glutamine amidotransferase class-I KAB01_00162 PF01909 Nucleotidyltransferase domain KAB01_00162 PF13427 Domain of unknown function (DUF4111) KAB01_00163 PF03551 Transcriptional regulator PadR-like family KAB01_00165 PF05726 Pirin C-terminal cupin domain KAB01_00165 PF02678 Pirin KAB01_00169 PF00750 tRNA synthetases class I (R) KAB01_00169 PF03485 Arginyl tRNA synthetase N terminal domain KAB01_00169 PF05746 DALR anticodon binding domain KAB01_00170 PF03949 Malic enzyme, NAD binding domain KAB01_00170 PF00390 Malic enzyme, N-terminal domain KAB01_00172 PF04261 Dyp-type peroxidase family KAB01_00173 PF01810 LysE type translocator KAB01_00174 PF00950 ABC 3 transport family KAB01_00175 PF00005 ABC transporter KAB01_00179 PF00119 ATP synthase A chain KAB01_00180 PF00137 ATP synthase subunit C KAB01_00181 PF00430 ATP synthase B/B' CF(0) KAB01_00182 PF00213 ATP synthase delta (OSCP) subunit KAB01_00183 PF00306 ATP synthase alpha/beta chain, C terminal domain KAB01_00183 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB01_00183 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB01_00184 PF00231 ATP synthase KAB01_00185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB01_00185 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB01_00186 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KAB01_00188 PF00255 Glutathione peroxidase KAB01_00190 PF07690 Major Facilitator Superfamily KAB01_00191 PF00440 Bacterial regulatory proteins, tetR family KAB01_00192 PF00892 EamA-like transporter family KAB01_00193 PF01300 Telomere recombination KAB01_00194 PF17782 DprA winged helix domain KAB01_00194 PF02481 DNA recombination-mediator protein A KAB01_00196 PF01327 Polypeptide deformylase KAB01_00201 PF00440 Bacterial regulatory proteins, tetR family KAB01_00208 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_00210 PF03358 NADPH-dependent FMN reductase KAB01_00214 PF11842 Domain of unknown function (DUF3362) KAB01_00214 PF04055 Radical SAM superfamily KAB01_00214 PF08497 Radical SAM N-terminal KAB01_00217 PF11798 IMS family HHH motif KAB01_00217 PF11799 impB/mucB/samB family C-terminal domain KAB01_00217 PF00817 impB/mucB/samB family KAB01_00219 PF07690 Major Facilitator Superfamily KAB01_00220 PF03641 Possible lysine decarboxylase KAB01_00221 PF03741 Integral membrane protein TerC family KAB01_00221 PF03471 Transporter associated domain KAB01_00222 PF02810 SEC-C motif KAB01_00223 PF03458 UPF0126 domain KAB01_00224 PF07690 Major Facilitator Superfamily KAB01_00225 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB01_00225 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB01_00226 PF00501 AMP-binding enzyme KAB01_00226 PF13193 AMP-binding enzyme C-terminal domain KAB01_00229 PF00719 Inorganic pyrophosphatase KAB01_00230 PF03573 outer membrane porin, OprD family KAB01_00233 PF00701 Dihydrodipicolinate synthetase family KAB01_00235 PF00155 Aminotransferase class I and II KAB01_00235 PF00392 Bacterial regulatory proteins, gntR family KAB01_00236 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB01_00236 PF01078 Magnesium chelatase, subunit ChlI KAB01_00237 PF13737 Transposase DDE domain KAB01_00239 PF00665 Integrase core domain KAB01_00243 PF13737 Transposase DDE domain KAB01_00246 PF00582 Universal stress protein family KAB01_00247 PF00916 Sulfate permease family KAB01_00247 PF01740 STAS domain KAB01_00252 PF00905 Penicillin binding protein transpeptidase domain KAB01_00256 PF07690 Major Facilitator Superfamily KAB01_00257 PF00440 Bacterial regulatory proteins, tetR family KAB01_00257 PF02909 Tetracyclin repressor-like, C-terminal domain KAB01_00260 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KAB01_00261 PF01636 Phosphotransferase enzyme family KAB01_00263 PF01078 Magnesium chelatase, subunit ChlI KAB01_00263 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB01_00265 PF00543 Nitrogen regulatory protein P-II KAB01_00266 PF00909 Ammonium Transporter Family KAB01_00267 PF03477 ATP cone domain KAB01_00268 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB01_00268 PF01872 RibD C-terminal domain KAB01_00270 PF00677 Lumazine binding domain KAB01_00274 PF02789 Cytosol aminopeptidase family, N-terminal domain KAB01_00274 PF00883 Cytosol aminopeptidase family, catalytic domain KAB01_00276 PF03739 Lipopolysaccharide export system permease LptF/LptG KAB01_00277 PF01676 Metalloenzyme superfamily KAB01_00277 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KAB01_00278 PF03572 Peptidase family S41 KAB01_00278 PF00595 PDZ domain KAB01_00279 PF00072 Response regulator receiver domain KAB01_00279 PF00158 Sigma-54 interaction domain KAB01_00279 PF02954 Bacterial regulatory protein, Fis family KAB01_00280 PF00512 His Kinase A (phospho-acceptor) domain KAB01_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00281 PF00196 Bacterial regulatory proteins, luxR family KAB01_00281 PF00072 Response regulator receiver domain KAB01_00282 PF00768 D-alanyl-D-alanine carboxypeptidase KAB01_00283 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_00284 PF01842 ACT domain KAB01_00284 PF00742 Homoserine dehydrogenase KAB01_00284 PF03447 Homoserine dehydrogenase, NAD binding domain KAB01_00285 PF10411 Disulfide bond isomerase protein N-terminus KAB01_00285 PF13098 Thioredoxin-like domain KAB01_00286 PF00589 Phage integrase family KAB01_00286 PF02899 Phage integrase, N-terminal SAM-like domain KAB01_00288 PF02421 Ferrous iron transport protein B KAB01_00288 PF07664 Ferrous iron transport protein B C terminus KAB01_00288 PF07670 Nucleoside recognition KAB01_00290 PF08245 Mur ligase middle domain KAB01_00290 PF02875 Mur ligase family, glutamate ligase domain KAB01_00291 PF01098 Cell cycle protein KAB01_00292 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB01_00293 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAB01_00294 PF00149 Calcineurin-like phosphoesterase KAB01_00295 PF00293 NUDIX domain KAB01_00296 PF01964 Radical SAM ThiC family KAB01_00296 PF13667 ThiC-associated domain KAB01_00299 PF00892 EamA-like transporter family KAB01_00300 PF02321 Outer membrane efflux protein KAB01_00301 PF01895 PhoU domain KAB01_00302 PF04362 Bacterial Fe(2+) trafficking KAB01_00303 PF00206 Lyase KAB01_00303 PF14698 Argininosuccinate lyase C-terminal KAB01_00304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00304 PF07694 5TMR of 5TMR-LYT KAB01_00304 PF06580 Histidine kinase KAB01_00305 PF04397 LytTr DNA-binding domain KAB01_00305 PF00072 Response regulator receiver domain KAB01_00306 PF03900 Porphobilinogen deaminase, C-terminal domain KAB01_00306 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAB01_00311 PF00816 H-NS histone family KAB01_00314 PF03958 Bacterial type II/III secretion system short domain KAB01_00314 PF00263 Bacterial type II and III secretion system protein KAB01_00315 PF00498 FHA domain KAB01_00315 PF12401 Protein of unknown function (DUF2662) KAB01_00316 PF13419 Haloacid dehalogenase-like hydrolase KAB01_00317 PF00425 chorismate binding enzyme KAB01_00317 PF04715 Anthranilate synthase component I, N terminal region KAB01_00322 PF03143 Elongation factor Tu C-terminal domain KAB01_00322 PF00009 Elongation factor Tu GTP binding domain KAB01_00322 PF03144 Elongation factor Tu domain 2 KAB01_00324 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAB01_00325 PF00467 KOW motif KAB01_00325 PF02357 Transcription termination factor nusG KAB01_00326 PF03946 Ribosomal protein L11, N-terminal domain KAB01_00326 PF00298 Ribosomal protein L11, RNA binding domain KAB01_00327 PF00687 Ribosomal protein L1p/L10e family KAB01_00328 PF00466 Ribosomal protein L10 KAB01_00329 PF16320 Ribosomal protein L7/L12 dimerisation domain KAB01_00329 PF00542 Ribosomal protein L7/L12 C-terminal domain KAB01_00330 PF04563 RNA polymerase beta subunit KAB01_00330 PF04560 RNA polymerase Rpb2, domain 7 KAB01_00330 PF04565 RNA polymerase Rpb2, domain 3 KAB01_00330 PF00562 RNA polymerase Rpb2, domain 6 KAB01_00330 PF10385 RNA polymerase beta subunit external 1 domain KAB01_00330 PF04561 RNA polymerase Rpb2, domain 2 KAB01_00331 PF05000 RNA polymerase Rpb1, domain 4 KAB01_00331 PF04998 RNA polymerase Rpb1, domain 5 KAB01_00331 PF00623 RNA polymerase Rpb1, domain 2 KAB01_00331 PF04997 RNA polymerase Rpb1, domain 1 KAB01_00331 PF04983 RNA polymerase Rpb1, domain 3 KAB01_00335 PF00561 alpha/beta hydrolase fold KAB01_00336 PF03553 Na+/H+ antiporter family KAB01_00336 PF13726 Na+-H+ antiporter family KAB01_00339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00339 PF00183 Hsp90 protein KAB01_00342 PF01323 DSBA-like thioredoxin domain KAB01_00344 PF00376 MerR family regulatory protein KAB01_00344 PF09278 MerR, DNA binding KAB01_00348 PF00108 Thiolase, N-terminal domain KAB01_00348 PF02803 Thiolase, C-terminal domain KAB01_00349 PF00378 Enoyl-CoA hydratase/isomerase KAB01_00349 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB01_00349 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB01_00354 PF08459 UvrC Helix-hairpin-helix N-terminal KAB01_00354 PF01541 GIY-YIG catalytic domain KAB01_00354 PF02151 UvrB/uvrC motif KAB01_00356 PF01066 CDP-alcohol phosphatidyltransferase KAB01_00357 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB01_00357 PF12833 Helix-turn-helix domain KAB01_00357 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB01_00357 PF02805 Metal binding domain of Ada KAB01_00362 PF13533 Biotin-lipoyl like KAB01_00363 PF03652 Holliday junction resolvase KAB01_00364 PF02622 Uncharacterized ACR, COG1678 KAB01_00365 PF02463 RecF/RecN/SMC N terminal domain KAB01_00367 PF06865 Pyrimidine/purine nucleoside phosphorylase KAB01_00368 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB01_00368 PF00588 SpoU rRNA Methylase family KAB01_00370 PF01121 Dephospho-CoA kinase KAB01_00371 PF06750 Bacterial Peptidase A24 N-terminal domain KAB01_00371 PF01478 Type IV leader peptidase family KAB01_00372 PF00482 Type II secretion system (T2SS), protein F KAB01_00373 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAB01_00373 PF00437 Type II/IV secretion system protein KAB01_00374 PF00121 Triosephosphate isomerase KAB01_00375 PF03840 Preprotein translocase SecG subunit KAB01_00379 PF17384 RimP C-terminal SH3 domain KAB01_00379 PF02576 RimP N-terminal domain KAB01_00380 PF00575 S1 RNA binding domain KAB01_00380 PF08529 NusA N-terminal domain KAB01_00380 PF13184 NusA-like KH domain KAB01_00381 PF11987 Translation-initiation factor 2 KAB01_00381 PF04760 Translation initiation factor IF-2, N-terminal region KAB01_00381 PF08364 Bacterial translation initiation factor IF-2 associated region KAB01_00381 PF00009 Elongation factor Tu GTP binding domain KAB01_00382 PF02033 Ribosome-binding factor A KAB01_00384 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KAB01_00386 PF00361 Proton-conducting membrane transporter KAB01_00387 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB01_00388 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB01_00388 PF00361 Proton-conducting membrane transporter KAB01_00388 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KAB01_00388 PF13244 Domain of unknown function (DUF4040) KAB01_00391 PF01502 Phosphoribosyl-AMP cyclohydrolase KAB01_00392 PF01494 FAD binding domain KAB01_00393 PF03109 ABC1 family KAB01_00395 PF01209 ubiE/COQ5 methyltransferase family KAB01_00397 PF03976 Polyphosphate kinase 2 (PPK2) KAB01_00399 PF17946 RecC C-terminal domain KAB01_00400 PF13361 UvrD-like helicase C-terminal domain KAB01_00400 PF12705 PD-(D/E)XK nuclease superfamily KAB01_00400 PF00580 UvrD/REP helicase N-terminal domain KAB01_00401 PF13538 UvrD-like helicase C-terminal domain KAB01_00403 PF00312 Ribosomal protein S15 KAB01_00404 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAB01_00404 PF03725 3' exoribonuclease family, domain 2 KAB01_00404 PF00575 S1 RNA binding domain KAB01_00404 PF00013 KH domain KAB01_00404 PF01138 3' exoribonuclease family, domain 1 KAB01_00405 PF01544 CorA-like Mg2+ transporter protein KAB01_00407 PF00226 DnaJ domain KAB01_00407 PF01556 DnaJ C terminal domain KAB01_00409 PF01430 Hsp33 protein KAB01_00410 PF02254 TrkA-N domain KAB01_00410 PF00999 Sodium/hydrogen exchanger family KAB01_00411 PF00271 Helicase conserved C-terminal domain KAB01_00411 PF18074 Primosomal protein N C-terminal domain KAB01_00411 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAB01_00411 PF17764 3′ DNA-binding domain (3′BD) KAB01_00411 PF00270 DEAD/DEAH box helicase KAB01_00412 PF00482 Type II secretion system (T2SS), protein F KAB01_00413 PF07963 Prokaryotic N-terminal methylation motif KAB01_00413 PF08334 Type II secretion system (T2SS), protein G KAB01_00415 PF01588 Putative tRNA binding domain KAB01_00416 PF00795 Carbon-nitrogen hydrolase KAB01_00417 PF00571 CBS domain KAB01_00417 PF03471 Transporter associated domain KAB01_00418 PF01206 Sulfurtransferase TusA KAB01_00421 PF01177 Asp/Glu/Hydantoin racemase KAB01_00423 PF00762 Ferrochelatase KAB01_00424 PF00753 Metallo-beta-lactamase superfamily KAB01_00425 PF03884 DNA gyrase inhibitor YacG KAB01_00429 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KAB01_00431 PF01197 Ribosomal protein L31 KAB01_00432 PF03109 ABC1 family KAB01_00433 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB01_00433 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_00434 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_00434 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB01_00434 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_00435 PF01554 MatE KAB01_00437 PF04055 Radical SAM superfamily KAB01_00437 PF06969 HemN C-terminal domain KAB01_00438 PF00106 short chain dehydrogenase KAB01_00439 PF03466 LysR substrate binding domain KAB01_00439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00442 PF00501 AMP-binding enzyme KAB01_00442 PF13193 AMP-binding enzyme C-terminal domain KAB01_00443 PF00575 S1 RNA binding domain KAB01_00443 PF10150 Ribonuclease E/G family KAB01_00443 PF12111 Polyribonucleotide phosphorylase C terminal KAB01_00444 PF01479 S4 domain KAB01_00444 PF00849 RNA pseudouridylate synthase KAB01_00445 PF13419 Haloacid dehalogenase-like hydrolase KAB01_00446 PF08279 HTH domain KAB01_00446 PF13280 WYL domain KAB01_00447 PF02798 Glutathione S-transferase, N-terminal domain KAB01_00449 PF03466 LysR substrate binding domain KAB01_00449 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00450 PF12706 Beta-lactamase superfamily domain KAB01_00451 PF00141 Peroxidase KAB01_00452 PF01590 GAF domain KAB01_00452 PF05524 PEP-utilising enzyme, N-terminal KAB01_00452 PF00391 PEP-utilising enzyme, mobile domain KAB01_00452 PF02896 PEP-utilising enzyme, TIM barrel domain KAB01_00453 PF00293 NUDIX domain KAB01_00457 PF03466 LysR substrate binding domain KAB01_00457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00459 PF00330 Aconitase family (aconitate hydratase) KAB01_00460 PF00694 Aconitase C-terminal domain KAB01_00462 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB01_00465 PF01176 Translation initiation factor 1A / IF-1 KAB01_00467 PF01416 tRNA pseudouridine synthase KAB01_00471 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB01_00471 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB01_00473 PF00375 Sodium:dicarboxylate symporter family KAB01_00475 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB01_00476 PF01810 LysE type translocator KAB01_00479 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_00479 PF00107 Zinc-binding dehydrogenase KAB01_00480 PF01638 HxlR-like helix-turn-helix KAB01_00482 PF01396 Topoisomerase DNA binding C4 zinc finger KAB01_00482 PF08272 Topoisomerase I zinc-ribbon-like KAB01_00482 PF01751 Toprim domain KAB01_00482 PF01131 DNA topoisomerase KAB01_00485 PF13361 UvrD-like helicase C-terminal domain KAB01_00485 PF00580 UvrD/REP helicase N-terminal domain KAB01_00486 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KAB01_00490 PF00999 Sodium/hydrogen exchanger family KAB01_00490 PF02254 TrkA-N domain KAB01_00491 PF00471 Ribosomal protein L33 KAB01_00492 PF00830 Ribosomal L28 family KAB01_00493 PF00171 Aldehyde dehydrogenase family KAB01_00495 PF00551 Formyl transferase KAB01_00495 PF01842 ACT domain KAB01_00497 PF01618 MotA/TolQ/ExbB proton channel family KAB01_00499 PF01625 Peptide methionine sulfoxide reductase KAB01_00501 PF00186 Dihydrofolate reductase KAB01_00502 PF00303 Thymidylate synthase KAB01_00505 PF01790 Prolipoprotein diacylglyceryl transferase KAB01_00509 PF00902 Sec-independent protein translocase protein (TatC) KAB01_00510 PF02416 mttA/Hcf106 family KAB01_00511 PF02416 mttA/Hcf106 family KAB01_00513 PF01725 Ham1 family KAB01_00515 PF07021 Methionine biosynthesis protein MetW KAB01_00515 PF00561 alpha/beta hydrolase fold KAB01_00516 PF00561 alpha/beta hydrolase fold KAB01_00517 PF00682 HMGL-like KAB01_00517 PF08502 LeuA allosteric (dimerisation) domain KAB01_00518 PF13640 2OG-Fe(II) oxygenase superfamily KAB01_00518 PF18331 PKHD-type hydroxylase C-terminal domain KAB01_00519 PF00593 TonB dependent receptor KAB01_00519 PF07715 TonB-dependent Receptor Plug Domain KAB01_00520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB01_00520 PF05697 Bacterial trigger factor protein (TF) KAB01_00520 PF05698 Bacterial trigger factor protein (TF) C-terminus KAB01_00521 PF00574 Clp protease KAB01_00522 PF06689 ClpX C4-type zinc finger KAB01_00522 PF10431 C-terminal, D2-small domain, of ClpB protein KAB01_00522 PF07724 AAA domain (Cdc48 subfamily) KAB01_00525 PF05683 Fumarase C-terminus KAB01_00525 PF05681 Fumarate hydratase (Fumerase) KAB01_00526 PF01515 Phosphate acetyl/butaryl transferase KAB01_00526 PF07085 DRTGG domain KAB01_00527 PF00871 Acetokinase family KAB01_00530 PF00920 Dehydratase family KAB01_00531 PF01081 KDPG and KHG aldolase KAB01_00532 PF02447 GntP family permease KAB01_00533 PF01202 Shikimate kinase KAB01_00534 PF00171 Aldehyde dehydrogenase family KAB01_00535 PF00171 Aldehyde dehydrogenase family KAB01_00536 PF00561 alpha/beta hydrolase fold KAB01_00538 PF00933 Glycosyl hydrolase family 3 N terminal domain KAB01_00539 PF11818 C-terminal domain of tail specific protease (DUF3340) KAB01_00539 PF03572 Peptidase family S41 KAB01_00539 PF00595 PDZ domain KAB01_00539 PF17804 Tail specific protease N-terminal domain KAB01_00540 PF13439 Glycosyltransferase Family 4 KAB01_00540 PF00534 Glycosyl transferases group 1 KAB01_00541 PF01569 PAP2 superfamily KAB01_00542 PF04384 Iron-sulphur cluster assembly KAB01_00543 PF00334 Nucleoside diphosphate kinase KAB01_00544 PF04055 Radical SAM superfamily KAB01_00546 PF13464 Domain of unknown function (DUF4115) KAB01_00547 PF04551 GcpE protein KAB01_00548 PF03129 Anticodon binding domain KAB01_00548 PF13393 Histidyl-tRNA synthetase KAB01_00550 PF13360 PQQ-like domain KAB01_00551 PF01926 50S ribosome-binding GTPase KAB01_00551 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAB01_00554 PF00550 Phosphopantetheine attachment site KAB01_00555 PF00550 Phosphopantetheine attachment site KAB01_00557 PF13193 AMP-binding enzyme C-terminal domain KAB01_00557 PF00501 AMP-binding enzyme KAB01_00560 PF00221 Aromatic amino acid lyase KAB01_00564 PF04820 Tryptophan halogenase KAB01_00566 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_00566 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_00569 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_00569 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_00572 PF02556 Preprotein translocase subunit SecB KAB01_00573 PF00462 Glutaredoxin KAB01_00575 PF03193 RsgA GTPase KAB01_00576 PF00929 Exonuclease KAB01_00579 PF02321 Outer membrane efflux protein KAB01_00580 PF00005 ABC transporter KAB01_00580 PF02687 FtsX-like permease family KAB01_00580 PF12704 MacB-like periplasmic core domain KAB01_00581 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_00584 PF09334 tRNA synthetases class I (M) KAB01_00584 PF13603 Leucyl-tRNA synthetase, Domain 2 KAB01_00584 PF00133 tRNA synthetases class I (I, L, M and V) KAB01_00584 PF08264 Anticodon-binding domain of tRNA KAB01_00586 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB01_00586 PF00205 Thiamine pyrophosphate enzyme, central domain KAB01_00586 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB01_00587 PF10369 Small subunit of acetolactate synthase KAB01_00588 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAB01_00588 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAB01_00589 PF00563 EAL domain KAB01_00589 PF00990 Diguanylate cyclase, GGDEF domain KAB01_00589 PF03707 Bacterial signalling protein N terminal repeat KAB01_00593 PF03144 Elongation factor Tu domain 2 KAB01_00593 PF00009 Elongation factor Tu GTP binding domain KAB01_00593 PF16658 Class II release factor RF3, C-terminal domain KAB01_00596 PF01026 TatD related DNase KAB01_00597 PF00694 Aconitase C-terminal domain KAB01_00597 PF00330 Aconitase family (aconitate hydratase) KAB01_00598 PF00694 Aconitase C-terminal domain KAB01_00598 PF00330 Aconitase family (aconitate hydratase) KAB01_00600 PF00899 ThiF family KAB01_00601 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00601 PF03466 LysR substrate binding domain KAB01_00603 PF01207 Dihydrouridine synthase (Dus) KAB01_00604 PF07690 Major Facilitator Superfamily KAB01_00606 PF00892 EamA-like transporter family KAB01_00607 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAB01_00607 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAB01_00608 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KAB01_00609 PF02233 NAD(P) transhydrogenase beta subunit KAB01_00610 PF00106 short chain dehydrogenase KAB01_00612 PF01261 Xylose isomerase-like TIM barrel KAB01_00613 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB01_00613 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB01_00614 PF00378 Enoyl-CoA hydratase/isomerase KAB01_00615 PF00672 HAMP domain KAB01_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00615 PF00512 His Kinase A (phospho-acceptor) domain KAB01_00615 PF01627 Hpt domain KAB01_00615 PF00072 Response regulator receiver domain KAB01_00615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAB01_00616 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_00618 PF05958 tRNA (Uracil-5-)-methyltransferase KAB01_00619 PF13291 ACT domain KAB01_00619 PF02824 TGS domain KAB01_00619 PF04607 Region found in RelA / SpoT proteins KAB01_00621 PF03819 MazG nucleotide pyrophosphohydrolase domain KAB01_00623 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB01_00623 PF12626 Polymerase A arginine-rich C-terminus KAB01_00623 PF01743 Poly A polymerase head domain KAB01_00624 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAB01_00625 PF02548 Ketopantoate hydroxymethyltransferase KAB01_00626 PF02569 Pantoate-beta-alanine ligase KAB01_00627 PF03668 P-loop ATPase protein family KAB01_00628 PF00381 PTS HPr component phosphorylation site KAB01_00629 PF04751 Protein of unknown function (DUF615) KAB01_00630 PF13193 AMP-binding enzyme C-terminal domain KAB01_00630 PF00501 AMP-binding enzyme KAB01_00631 PF03129 Anticodon binding domain KAB01_00631 PF02824 TGS domain KAB01_00631 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB01_00631 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB01_00632 PF00707 Translation initiation factor IF-3, C-terminal domain KAB01_00632 PF05198 Translation initiation factor IF-3, N-terminal domain KAB01_00633 PF02798 Glutathione S-transferase, N-terminal domain KAB01_00633 PF00043 Glutathione S-transferase, C-terminal domain KAB01_00634 PF09335 SNARE associated Golgi protein KAB01_00635 PF07690 Major Facilitator Superfamily KAB01_00636 PF01632 Ribosomal protein L35 KAB01_00637 PF00453 Ribosomal protein L20 KAB01_00641 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAB01_00641 PF01409 tRNA synthetases class II core domain (F) KAB01_00642 PF03483 B3/4 domain KAB01_00642 PF03484 tRNA synthetase B5 domain KAB01_00642 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAB01_00642 PF03147 Ferredoxin-fold anticodon binding domain KAB01_00642 PF01588 Putative tRNA binding domain KAB01_00643 PF00216 Bacterial DNA-binding protein KAB01_00645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB01_00645 PF07498 Rho termination factor, N-terminal domain KAB01_00645 PF07497 Rho termination factor, RNA-binding domain KAB01_00646 PF00085 Thioredoxin KAB01_00647 PF02541 Ppx/GppA phosphatase family KAB01_00648 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KAB01_00649 PF11734 TilS substrate C-terminal domain KAB01_00649 PF09179 TilS substrate binding domain KAB01_00649 PF01171 PP-loop family KAB01_00650 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB01_00650 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB01_00651 PF02325 YGGT family KAB01_00652 PF00476 DNA polymerase family A KAB01_00652 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAB01_00652 PF01367 5'-3' exonuclease, C-terminal SAM fold KAB01_00652 PF01612 3'-5' exonuclease KAB01_00659 PF00437 Type II/IV secretion system protein KAB01_00660 PF02566 OsmC-like protein KAB01_00661 PF01047 MarR family KAB01_00663 PF00795 Carbon-nitrogen hydrolase KAB01_00672 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAB01_00672 PF04963 Sigma-54 factor, core binding domain KAB01_00672 PF04552 Sigma-54, DNA binding domain KAB01_00673 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAB01_00674 PF01722 BolA-like protein KAB01_00675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB01_00676 PF01634 ATP phosphoribosyltransferase KAB01_00677 PF01634 ATP phosphoribosyltransferase KAB01_00678 PF00815 Histidinol dehydrogenase KAB01_00679 PF00155 Aminotransferase class I and II KAB01_00680 PF00425 chorismate binding enzyme KAB01_00680 PF04715 Anthranilate synthase component I, N terminal region KAB01_00689 PF00293 NUDIX domain KAB01_00690 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_00691 PF00814 Glycoprotease family KAB01_00692 PF04445 Putative SAM-dependent methyltransferase KAB01_00694 PF00756 Putative esterase KAB01_00696 PF00834 Ribulose-phosphate 3 epimerase family KAB01_00699 PF00394 Multicopper oxidase KAB01_00699 PF07731 Multicopper oxidase KAB01_00699 PF07732 Multicopper oxidase KAB01_00700 PF05275 Copper resistance protein B precursor (CopB) KAB01_00702 PF00893 Small Multidrug Resistance protein KAB01_00703 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB01_00703 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB01_00704 PF01960 ArgJ family KAB01_00705 PF02445 Quinolinate synthetase A protein KAB01_00710 PF00962 Adenosine/AMP deaminase KAB01_00711 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_00711 PF00107 Zinc-binding dehydrogenase KAB01_00712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00712 PF03466 LysR substrate binding domain KAB01_00713 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_00713 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_00713 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_00714 PF07690 Major Facilitator Superfamily KAB01_00715 PF02515 CoA-transferase family III KAB01_00717 PF14537 Cytochrome c3 KAB01_00717 PF00890 FAD binding domain KAB01_00718 PF03466 LysR substrate binding domain KAB01_00718 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00720 PF07690 Major Facilitator Superfamily KAB01_00721 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00721 PF03466 LysR substrate binding domain KAB01_00723 PF01546 Peptidase family M20/M25/M40 KAB01_00723 PF07687 Peptidase dimerisation domain KAB01_00724 PF12833 Helix-turn-helix domain KAB01_00724 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB01_00726 PF01810 LysE type translocator KAB01_00727 PF03466 LysR substrate binding domain KAB01_00727 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00729 PF01717 Cobalamin-independent synthase, Catalytic domain KAB01_00729 PF08267 Cobalamin-independent synthase, N-terminal domain KAB01_00730 PF01613 Flavin reductase like domain KAB01_00735 PF02567 Phenazine biosynthesis-like protein KAB01_00739 PF13360 PQQ-like domain KAB01_00739 PF01011 PQQ enzyme repeat KAB01_00754 PF00672 HAMP domain KAB01_00754 PF13755 Sensor N-terminal transmembrane domain KAB01_00754 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00754 PF00512 His Kinase A (phospho-acceptor) domain KAB01_00754 PF13756 Stimulus-sensing domain KAB01_00755 PF00268 Ribonucleotide reductase, small chain KAB01_00757 PF00317 Ribonucleotide reductase, all-alpha domain KAB01_00757 PF03477 ATP cone domain KAB01_00757 PF02867 Ribonucleotide reductase, barrel domain KAB01_00758 PF00486 Transcriptional regulatory protein, C terminal KAB01_00758 PF00072 Response regulator receiver domain KAB01_00759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_00759 PF00512 His Kinase A (phospho-acceptor) domain KAB01_00759 PF00672 HAMP domain KAB01_00761 PF17151 Periplasmic sensor domain KAB01_00761 PF00990 Diguanylate cyclase, GGDEF domain KAB01_00762 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KAB01_00763 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAB01_00764 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KAB01_00764 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAB01_00766 PF10531 SLBB domain KAB01_00766 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAB01_00766 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB01_00767 PF00384 Molybdopterin oxidoreductase KAB01_00767 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB01_00767 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB01_00768 PF00146 NADH dehydrogenase KAB01_00769 PF12838 4Fe-4S dicluster domain KAB01_00770 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KAB01_00771 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB01_00772 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB01_00772 PF00361 Proton-conducting membrane transporter KAB01_00773 PF00361 Proton-conducting membrane transporter KAB01_00774 PF00361 Proton-conducting membrane transporter KAB01_00776 PF00313 'Cold-shock' DNA-binding domain KAB01_00777 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00777 PF03466 LysR substrate binding domain KAB01_00778 PF00175 Oxidoreductase NAD-binding domain KAB01_00778 PF00970 Oxidoreductase FAD-binding domain KAB01_00781 PF05552 Conserved TM helix KAB01_00784 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_00785 PF13533 Biotin-lipoyl like KAB01_00790 PF01588 Putative tRNA binding domain KAB01_00790 PF09334 tRNA synthetases class I (M) KAB01_00792 PF10609 NUBPL iron-transfer P-loop NTPase KAB01_00793 PF01048 Phosphorylase superfamily KAB01_00796 PF00692 dUTPase KAB01_00802 PF01207 Dihydrouridine synthase (Dus) KAB01_00804 PF02978 Signal peptide binding domain KAB01_00804 PF02881 SRP54-type protein, helical bundle domain KAB01_00804 PF00448 SRP54-type protein, GTPase domain KAB01_00805 PF03309 Type III pantothenate kinase KAB01_00807 PF01925 Sulfite exporter TauE/SafE KAB01_00809 PF06470 SMC proteins Flexible Hinge Domain KAB01_00809 PF02463 RecF/RecN/SMC N terminal domain KAB01_00811 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAB01_00811 PF12826 Helix-hairpin-helix motif KAB01_00811 PF00533 BRCA1 C Terminus (BRCT) domain KAB01_00811 PF01653 NAD-dependent DNA ligase adenylation domain KAB01_00811 PF03120 NAD-dependent DNA ligase OB-fold domain KAB01_00812 PF00210 Ferritin-like domain KAB01_00813 PF07690 Major Facilitator Superfamily KAB01_00814 PF00982 Glycosyltransferase family 20 KAB01_00815 PF02358 Trehalose-phosphatase KAB01_00816 PF08241 Methyltransferase domain KAB01_00816 PF12697 Alpha/beta hydrolase family KAB01_00817 PF04055 Radical SAM superfamily KAB01_00817 PF06968 Biotin and Thiamin Synthesis associated domain KAB01_00817 PF00202 Aminotransferase class-III KAB01_00818 PF00155 Aminotransferase class I and II KAB01_00821 PF01479 S4 domain KAB01_00821 PF00849 RNA pseudouridylate synthase KAB01_00822 PF04079 Segregation and condensation complex subunit ScpB KAB01_00823 PF02616 Segregation and condensation protein ScpA KAB01_00824 PF01300 Telomere recombination KAB01_00825 PF04315 Elongation factor P hydroxylase KAB01_00826 PF02620 Large ribosomal RNA subunit accumulation protein YceD KAB01_00827 PF01783 Ribosomal L32p protein family KAB01_00828 PF00698 Acyl transferase domain KAB01_00830 PF00550 Phosphopantetheine attachment site KAB01_00831 PF01476 LysM domain KAB01_00831 PF04972 BON domain KAB01_00832 PF03070 TENA/THI-4/PQQC family KAB01_00832 PF02581 Thiamine monophosphate synthase KAB01_00832 PF08543 Phosphomethylpyrimidine kinase KAB01_00834 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB01_00837 PF02261 Aspartate decarboxylase KAB01_00838 PF01195 Peptidyl-tRNA hydrolase KAB01_00839 PF01386 Ribosomal L25p family KAB01_00840 PF14572 Phosphoribosyl synthetase-associated domain KAB01_00840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB01_00845 PF03550 Outer membrane lipoprotein LolB KAB01_00847 PF01488 Shikimate / quinate 5-dehydrogenase KAB01_00847 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAB01_00847 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAB01_00848 PF08275 DNA primase catalytic core, N-terminal domain KAB01_00848 PF08278 DNA primase DnaG DnaB-binding KAB01_00848 PF10410 DnaB-helicase binding domain of primase KAB01_00848 PF01807 CHC2 zinc finger KAB01_00849 PF13525 Outer membrane lipoprotein KAB01_00850 PF00849 RNA pseudouridylate synthase KAB01_00850 PF01479 S4 domain KAB01_00852 PF03358 NADPH-dependent FMN reductase KAB01_00853 PF01668 SmpB protein KAB01_00854 PF01467 Cytidylyltransferase-like KAB01_00855 PF00037 4Fe-4S binding domain KAB01_00858 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_00858 PF03466 LysR substrate binding domain KAB01_00859 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB01_00860 PF02028 BCCT, betaine/carnitine/choline family transporter KAB01_00861 PF07859 alpha/beta hydrolase fold KAB01_00862 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB01_00862 PF00355 Rieske [2Fe-2S] domain KAB01_00863 PF00171 Aldehyde dehydrogenase family KAB01_00864 PF00175 Oxidoreductase NAD-binding domain KAB01_00864 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_00864 PF00970 Oxidoreductase FAD-binding domain KAB01_00867 PF00795 Carbon-nitrogen hydrolase KAB01_00867 PF02540 NAD synthase KAB01_00869 PF02678 Pirin KAB01_00869 PF05726 Pirin C-terminal cupin domain KAB01_00871 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_00871 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_00873 PF00164 Ribosomal protein S12/S23 KAB01_00874 PF00177 Ribosomal protein S7p/S5e KAB01_00875 PF14492 Elongation Factor G, domain II KAB01_00875 PF00009 Elongation factor Tu GTP binding domain KAB01_00875 PF03144 Elongation factor Tu domain 2 KAB01_00875 PF00679 Elongation factor G C-terminus KAB01_00875 PF03764 Elongation factor G, domain IV KAB01_00876 PF00009 Elongation factor Tu GTP binding domain KAB01_00876 PF03144 Elongation factor Tu domain 2 KAB01_00876 PF03143 Elongation factor Tu C-terminal domain KAB01_00879 PF00583 Acetyltransferase (GNAT) family KAB01_00880 PF04377 Arginine-tRNA-protein transferase, C terminus KAB01_00880 PF04376 Arginine-tRNA-protein transferase, N terminus KAB01_00881 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KAB01_00882 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_00883 PF17854 FtsK alpha domain KAB01_00883 PF01580 FtsK/SpoIIIE family KAB01_00883 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAB01_00883 PF09397 Ftsk gamma domain KAB01_00884 PF01810 LysE type translocator KAB01_00887 PF03776 Septum formation topological specificity factor MinE KAB01_00888 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAB01_00889 PF03775 Septum formation inhibitor MinC, C-terminal domain KAB01_00893 PF01553 Acyltransferase KAB01_00894 PF00691 OmpA family KAB01_00894 PF13488 Glycine zipper KAB01_00895 PF13361 UvrD-like helicase C-terminal domain KAB01_00895 PF00580 UvrD/REP helicase N-terminal domain KAB01_00896 PF00692 dUTPase KAB01_00897 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB01_00897 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB01_00897 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB01_00897 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB01_00898 PF00696 Amino acid kinase family KAB01_00900 PF13230 Glutamine amidotransferases class-II KAB01_00901 PF01814 Hemerythrin HHE cation binding domain KAB01_00903 PF03658 RnfH family Ubiquitin KAB01_00904 PF04355 SmpA / OmlA family KAB01_00905 PF01475 Ferric uptake regulator family KAB01_00906 PF00437 Type II/IV secretion system protein KAB01_00907 PF00437 Type II/IV secretion system protein KAB01_00908 PF01168 Alanine racemase, N-terminal domain KAB01_00910 PF00149 Calcineurin-like phosphoesterase KAB01_00910 PF12320 Type 5 capsule protein repressor C-terminal domain KAB01_00914 PF01370 NAD dependent epimerase/dehydratase family KAB01_00914 PF08338 Domain of unknown function (DUF1731) KAB01_00915 PF01266 FAD dependent oxidoreductase KAB01_00916 PF00490 Delta-aminolevulinic acid dehydratase KAB01_00917 PF03061 Thioesterase superfamily KAB01_00918 PF13533 Biotin-lipoyl like KAB01_00919 PF07690 Major Facilitator Superfamily KAB01_00935 PF00929 Exonuclease KAB01_00951 PF00145 C-5 cytosine-specific DNA methylase KAB01_00953 PF13737 Transposase DDE domain KAB01_00954 PF01695 IstB-like ATP binding protein KAB01_00994 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KAB01_01002 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB01_01002 PF02767 DNA polymerase III beta subunit, central domain KAB01_01002 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB01_01022 PF00589 Phage integrase family KAB01_01022 PF13356 Arm DNA-binding domain KAB01_01037 PF07693 KAP family P-loop domain KAB01_01040 PF01026 TatD related DNase KAB01_01045 PF00083 Sugar (and other) transporter KAB01_01046 PF00701 Dihydrodipicolinate synthetase family KAB01_01048 PF04542 Sigma-70 region 2 KAB01_01048 PF08281 Sigma-70, region 4 KAB01_01050 PF07715 TonB-dependent Receptor Plug Domain KAB01_01050 PF00593 TonB dependent receptor KAB01_01054 PF01126 Heme oxygenase KAB01_01059 PF13520 Amino acid permease KAB01_01060 PF02574 Homocysteine S-methyltransferase KAB01_01062 PF06039 Malate:quinone oxidoreductase (Mqo) KAB01_01063 PF00732 GMC oxidoreductase KAB01_01063 PF05199 GMC oxidoreductase KAB01_01064 PF00171 Aldehyde dehydrogenase family KAB01_01065 PF00440 Bacterial regulatory proteins, tetR family KAB01_01065 PF13977 BetI-type transcriptional repressor, C-terminal KAB01_01066 PF02028 BCCT, betaine/carnitine/choline family transporter KAB01_01067 PF02028 BCCT, betaine/carnitine/choline family transporter KAB01_01069 PF03061 Thioesterase superfamily KAB01_01071 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB01_01071 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB01_01072 PF00375 Sodium:dicarboxylate symporter family KAB01_01073 PF07152 YaeQ protein KAB01_01074 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB01_01075 PF01522 Polysaccharide deacetylase KAB01_01075 PF14883 Hypothetical glycosyl hydrolase family 13 KAB01_01076 PF00535 Glycosyl transferase family 2 KAB01_01078 PF00378 Enoyl-CoA hydratase/isomerase KAB01_01081 PF09339 IclR helix-turn-helix domain KAB01_01081 PF01614 Bacterial transcriptional regulator KAB01_01082 PF00355 Rieske [2Fe-2S] domain KAB01_01084 PF00355 Rieske [2Fe-2S] domain KAB01_01086 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB01_01087 PF14759 Reductase C-terminal KAB01_01087 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01088 PF07690 Major Facilitator Superfamily KAB01_01090 PF12697 Alpha/beta hydrolase family KAB01_01092 PF01958 Domain of unknown function DUF108 KAB01_01092 PF03447 Homoserine dehydrogenase, NAD binding domain KAB01_01093 PF00171 Aldehyde dehydrogenase family KAB01_01094 PF00205 Thiamine pyrophosphate enzyme, central domain KAB01_01094 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB01_01094 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB01_01096 PF07690 Major Facilitator Superfamily KAB01_01098 PF01327 Polypeptide deformylase KAB01_01099 PF04960 Glutaminase KAB01_01100 PF02311 AraC-like ligand binding domain KAB01_01100 PF12833 Helix-turn-helix domain KAB01_01101 PF07690 Major Facilitator Superfamily KAB01_01102 PF01263 Aldose 1-epimerase KAB01_01104 PF03466 LysR substrate binding domain KAB01_01104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01106 PF07690 Major Facilitator Superfamily KAB01_01107 PF00456 Transketolase, thiamine diphosphate binding domain KAB01_01108 PF02780 Transketolase, C-terminal domain KAB01_01108 PF02779 Transketolase, pyrimidine binding domain KAB01_01109 PF02574 Homocysteine S-methyltransferase KAB01_01109 PF00809 Pterin binding enzyme KAB01_01109 PF02310 B12 binding domain KAB01_01109 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAB01_01109 PF02607 B12 binding domain KAB01_01110 PF01384 Phosphate transporter family KAB01_01111 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_01114 PF03781 Sulfatase-modifying factor enzyme 1 KAB01_01115 PF00884 Sulfatase KAB01_01117 PF01521 Iron-sulphur cluster biosynthesis KAB01_01117 PF01106 NifU-like domain KAB01_01118 PF07715 TonB-dependent Receptor Plug Domain KAB01_01118 PF00593 TonB dependent receptor KAB01_01120 PF00561 alpha/beta hydrolase fold KAB01_01122 PF00484 Carbonic anhydrase KAB01_01123 PF13472 GDSL-like Lipase/Acylhydrolase family KAB01_01124 PF00005 ABC transporter KAB01_01126 PF01694 Rhomboid family KAB01_01127 PF00912 Transglycosylase KAB01_01128 PF17941 Polyphosphate kinase C-terminal domain 1 KAB01_01128 PF02503 Polyphosphate kinase middle domain KAB01_01128 PF13090 Polyphosphate kinase C-terminal domain 2 KAB01_01128 PF13089 Polyphosphate kinase N-terminal domain KAB01_01130 PF03466 LysR substrate binding domain KAB01_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01131 PF00561 alpha/beta hydrolase fold KAB01_01132 PF18113 Rubredoxin binding C-terminal domain KAB01_01132 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01133 PF00301 Rubredoxin KAB01_01136 PF00152 tRNA synthetases class II (D, K and N) KAB01_01136 PF01336 OB-fold nucleic acid binding domain KAB01_01137 PF14052 Capsule assembly protein Wzi KAB01_01141 PF01507 Phosphoadenosine phosphosulfate reductase family KAB01_01142 PF00009 Elongation factor Tu GTP binding domain KAB01_01145 PF03600 Citrate transporter KAB01_01146 PF01595 Cyclin M transmembrane N-terminal domain KAB01_01146 PF03471 Transporter associated domain KAB01_01146 PF00571 CBS domain KAB01_01147 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01147 PF03466 LysR substrate binding domain KAB01_01148 PF00463 Isocitrate lyase family KAB01_01151 PF01774 UreD urease accessory protein KAB01_01152 PF00547 Urease, gamma subunit KAB01_01153 PF00699 Urease beta subunit KAB01_01154 PF00449 Urease alpha-subunit, N-terminal domain KAB01_01154 PF01979 Amidohydrolase family KAB01_01155 PF01979 Amidohydrolase family KAB01_01155 PF00449 Urease alpha-subunit, N-terminal domain KAB01_01156 PF05194 UreE urease accessory protein, C-terminal domain KAB01_01156 PF02814 UreE urease accessory protein, N-terminal domain KAB01_01157 PF01730 UreF KAB01_01158 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB01_01161 PF03717 Penicillin-binding Protein dimerisation domain KAB01_01161 PF00905 Penicillin binding protein transpeptidase domain KAB01_01164 PF05191 Adenylate kinase, active site lid KAB01_01165 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB01_01165 PF10576 Iron-sulfur binding domain of endonuclease III KAB01_01165 PF00633 Helix-hairpin-helix motif KAB01_01166 PF04060 Putative Fe-S cluster KAB01_01167 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB01_01167 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB01_01169 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAB01_01170 PF02590 Predicted SPOUT methyltransferase KAB01_01171 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_01171 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB01_01171 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAB01_01172 PF13018 Extended Signal Peptide of Type V secretion system KAB01_01172 PF05662 Coiled stalk of trimeric autotransporter adhesin KAB01_01172 PF05658 Head domain of trimeric autotransporter adhesin KAB01_01172 PF03895 YadA-like membrane anchor domain KAB01_01174 PF01812 5-formyltetrahydrofolate cyclo-ligase family KAB01_01238 PF01476 LysM domain KAB01_01238 PF08525 Opacity-associated protein A N-terminal motif KAB01_01238 PF01551 Peptidase family M23 KAB01_01247 PF08019 Phosphoethanolamine transferase EptA/EptB KAB01_01247 PF00884 Sulfatase KAB01_01254 PF05195 Aminopeptidase P, N-terminal domain KAB01_01254 PF00557 Metallopeptidase family M24 KAB01_01255 PF01494 FAD binding domain KAB01_01256 PF01494 FAD binding domain KAB01_01258 PF13411 MerR HTH family regulatory protein KAB01_01260 PF01810 LysE type translocator KAB01_01261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01261 PF03466 LysR substrate binding domain KAB01_01263 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB01_01264 PF02021 Uncharacterised protein family UPF0102 KAB01_01265 PF04972 BON domain KAB01_01267 PF09297 NADH pyrophosphatase zinc ribbon domain KAB01_01267 PF00293 NUDIX domain KAB01_01269 PF00929 Exonuclease KAB01_01270 PF00075 RNase H KAB01_01271 PF01476 LysM domain KAB01_01271 PF01464 Transglycosylase SLT domain KAB01_01271 PF01476 LysM domain KAB01_01271 PF01464 Transglycosylase SLT domain KAB01_01272 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAB01_01273 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01274 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01274 PF12911 N-terminal TM domain of oligopeptide transport permease C KAB01_01275 PF00005 ABC transporter KAB01_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB01_01276 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB01_01276 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01277 PF07715 TonB-dependent Receptor Plug Domain KAB01_01277 PF00593 TonB dependent receptor KAB01_01279 PF00929 Exonuclease KAB01_01280 PF01979 Amidohydrolase family KAB01_01281 PF00360 Phytochrome region KAB01_01281 PF00990 Diguanylate cyclase, GGDEF domain KAB01_01281 PF00563 EAL domain KAB01_01281 PF01590 GAF domain KAB01_01282 PF00764 Arginosuccinate synthase KAB01_01283 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB01_01283 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01286 PF13610 DDE domain KAB01_01287 PF00239 Resolvase, N terminal domain KAB01_01287 PF02796 Helix-turn-helix domain of resolvase KAB01_01289 PF13700 Domain of unknown function (DUF4158) KAB01_01289 PF01526 Tn3 transposase DDE domain KAB01_01290 PF02796 Helix-turn-helix domain of resolvase KAB01_01290 PF00239 Resolvase, N terminal domain KAB01_01291 PF13610 DDE domain KAB01_01293 PF00440 Bacterial regulatory proteins, tetR family KAB01_01293 PF17932 Tetracyclin repressor-like, C-terminal domain KAB01_01294 PF02678 Pirin KAB01_01294 PF17954 Quercetinase C-terminal cupin domain KAB01_01296 PF00106 short chain dehydrogenase KAB01_01297 PF13737 Transposase DDE domain KAB01_01298 PF00743 Flavin-binding monooxygenase-like KAB01_01300 PF00860 Permease family KAB01_01301 PF00962 Adenosine/AMP deaminase KAB01_01302 PF01292 Prokaryotic cytochrome b561 KAB01_01304 PF01351 Ribonuclease HII KAB01_01305 PF02599 Global regulator protein family KAB01_01306 PF01842 ACT domain KAB01_01306 PF13840 ACT domain KAB01_01306 PF00696 Amino acid kinase family KAB01_01307 PF02272 DHHA1 domain KAB01_01307 PF01411 tRNA synthetases class II (A) KAB01_01307 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB01_01308 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB01_01308 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB01_01309 PF13393 Histidyl-tRNA synthetase KAB01_01310 PF00709 Adenylosuccinate synthetase KAB01_01313 PF00248 Aldo/keto reductase family KAB01_01316 PF13545 Crp-like helix-turn-helix domain KAB01_01316 PF00027 Cyclic nucleotide-binding domain KAB01_01317 PF02566 OsmC-like protein KAB01_01320 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_01320 PF07724 AAA domain (Cdc48 subfamily) KAB01_01320 PF10431 C-terminal, D2-small domain, of ClpB protein KAB01_01320 PF02861 Clp amino terminal domain, pathogenicity island component KAB01_01320 PF17871 AAA lid domain KAB01_01323 PF10672 S-adenosylmethionine-dependent methyltransferase KAB01_01323 PF02926 THUMP domain KAB01_01323 PF01170 Putative RNA methylase family UPF0020 KAB01_01325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB01_01325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB01_01326 PF01979 Amidohydrolase family KAB01_01327 PF13488 Glycine zipper KAB01_01327 PF00691 OmpA family KAB01_01329 PF13417 Glutathione S-transferase, N-terminal domain KAB01_01329 PF00043 Glutathione S-transferase, C-terminal domain KAB01_01330 PF02390 Putative methyltransferase KAB01_01332 PF02798 Glutathione S-transferase, N-terminal domain KAB01_01332 PF00043 Glutathione S-transferase, C-terminal domain KAB01_01334 PF13192 Thioredoxin domain KAB01_01334 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01338 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB01_01338 PF00578 AhpC/TSA family KAB01_01339 PF00271 Helicase conserved C-terminal domain KAB01_01339 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KAB01_01339 PF11898 Domain of unknown function (DUF3418) KAB01_01339 PF00270 DEAD/DEAH box helicase KAB01_01339 PF04408 Helicase associated domain (HA2) KAB01_01340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAB01_01340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAB01_01342 PF07690 Major Facilitator Superfamily KAB01_01343 PF03594 Benzoate membrane transport protein KAB01_01344 PF00106 short chain dehydrogenase KAB01_01345 PF00175 Oxidoreductase NAD-binding domain KAB01_01345 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_01345 PF00970 Oxidoreductase FAD-binding domain KAB01_01346 PF00866 Ring hydroxylating beta subunit KAB01_01347 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB01_01347 PF00355 Rieske [2Fe-2S] domain KAB01_01348 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01348 PF03466 LysR substrate binding domain KAB01_01349 PF00403 Heavy-metal-associated domain KAB01_01350 PF00403 Heavy-metal-associated domain KAB01_01351 PF09278 MerR, DNA binding KAB01_01351 PF00376 MerR family regulatory protein KAB01_01358 PF02601 Exonuclease VII, large subunit KAB01_01358 PF13742 OB-fold nucleic acid binding domain KAB01_01365 PF01810 LysE type translocator KAB01_01366 PF00313 'Cold-shock' DNA-binding domain KAB01_01368 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB01_01368 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB01_01373 PF07690 Major Facilitator Superfamily KAB01_01374 PF01638 HxlR-like helix-turn-helix KAB01_01377 PF13737 Transposase DDE domain KAB01_01382 PF09190 DALR domain KAB01_01382 PF01406 tRNA synthetases class I (C) catalytic domain KAB01_01383 PF01380 SIS domain KAB01_01383 PF00571 CBS domain KAB01_01386 PF03968 OstA-like protein KAB01_01387 PF00005 ABC transporter KAB01_01387 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAB01_01388 PF02321 Outer membrane efflux protein KAB01_01389 PF03412 Peptidase C39 family KAB01_01389 PF00664 ABC transporter transmembrane region KAB01_01389 PF00005 ABC transporter KAB01_01391 PF01205 Uncharacterized protein family UPF0029 KAB01_01392 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_01394 PF01596 O-methyltransferase KAB01_01396 PF00037 4Fe-4S binding domain KAB01_01396 PF11953 Domain of unknown function (DUF3470) KAB01_01398 PF01624 MutS domain I KAB01_01398 PF00488 MutS domain V KAB01_01398 PF05192 MutS domain III KAB01_01398 PF05188 MutS domain II KAB01_01398 PF05190 MutS family domain IV KAB01_01399 PF01037 Lrp/AsnC ligand binding domain KAB01_01400 PF00892 EamA-like transporter family KAB01_01401 PF03707 Bacterial signalling protein N terminal repeat KAB01_01401 PF00563 EAL domain KAB01_01401 PF00990 Diguanylate cyclase, GGDEF domain KAB01_01402 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB01_01404 PF07690 Major Facilitator Superfamily KAB01_01408 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB01_01408 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB01_01411 PF13419 Haloacid dehalogenase-like hydrolase KAB01_01413 PF04717 Type VI secretion system, phage-baseplate injector KAB01_01413 PF16671 Actin cross-linking domain KAB01_01414 PF14220 Domain of unknown function (DUF4329) KAB01_01414 PF03527 RHS protein KAB01_01414 PF05593 RHS Repeat KAB01_01417 PF03466 LysR substrate binding domain KAB01_01417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01418 PF01566 Natural resistance-associated macrophage protein KAB01_01419 PF03746 LamB/YcsF family KAB01_01420 PF07286 Protein of unknown function (DUF1445) KAB01_01422 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB01_01422 PF00364 Biotin-requiring enzyme KAB01_01422 PF00289 Biotin carboxylase, N-terminal domain KAB01_01422 PF02785 Biotin carboxylase C-terminal domain KAB01_01423 PF00654 Voltage gated chloride channel KAB01_01428 PF00440 Bacterial regulatory proteins, tetR family KAB01_01430 PF13823 Alcohol dehydrogenase GroES-associated KAB01_01430 PF00107 Zinc-binding dehydrogenase KAB01_01430 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_01433 PF00289 Biotin carboxylase, N-terminal domain KAB01_01433 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB01_01433 PF02785 Biotin carboxylase C-terminal domain KAB01_01434 PF02525 Flavodoxin-like fold KAB01_01435 PF01638 HxlR-like helix-turn-helix KAB01_01438 PF01402 Ribbon-helix-helix protein, copG family KAB01_01438 PF08753 NikR C terminal nickel binding domain KAB01_01439 PF01425 Amidase KAB01_01440 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB01_01441 PF00005 ABC transporter KAB01_01456 PF01389 OmpA-like transmembrane domain KAB01_01456 PF00691 OmpA family KAB01_01459 PF13737 Transposase DDE domain KAB01_01460 PF07724 AAA domain (Cdc48 subfamily) KAB01_01460 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_01460 PF10431 C-terminal, D2-small domain, of ClpB protein KAB01_01460 PF17871 AAA lid domain KAB01_01466 PF03466 LysR substrate binding domain KAB01_01466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01468 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB01_01469 PF07690 Major Facilitator Superfamily KAB01_01472 PF02677 Epoxyqueuosine reductase QueH KAB01_01476 PF00376 MerR family regulatory protein KAB01_01476 PF09278 MerR, DNA binding KAB01_01479 PF00701 Dihydrodipicolinate synthetase family KAB01_01481 PF00392 Bacterial regulatory proteins, gntR family KAB01_01482 PF05544 Proline racemase KAB01_01483 PF01266 FAD dependent oxidoreductase KAB01_01485 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01485 PF04324 BFD-like [2Fe-2S] binding domain KAB01_01487 PF00083 Sugar (and other) transporter KAB01_01488 PF00171 Aldehyde dehydrogenase family KAB01_01489 PF13520 Amino acid permease KAB01_01490 PF03313 Serine dehydratase alpha chain KAB01_01490 PF03315 Serine dehydratase beta chain KAB01_01491 PF01575 MaoC like domain KAB01_01491 PF00171 Aldehyde dehydrogenase family KAB01_01492 PF05138 Phenylacetic acid catabolic protein KAB01_01493 PF06243 Phenylacetic acid degradation B KAB01_01494 PF05138 Phenylacetic acid catabolic protein KAB01_01495 PF01883 Iron-sulfur cluster assembly protein KAB01_01496 PF00970 Oxidoreductase FAD-binding domain KAB01_01496 PF00175 Oxidoreductase NAD-binding domain KAB01_01496 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_01497 PF00378 Enoyl-CoA hydratase/isomerase KAB01_01498 PF00378 Enoyl-CoA hydratase/isomerase KAB01_01499 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB01_01499 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB01_01499 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB01_01500 PF02803 Thiolase, C-terminal domain KAB01_01500 PF00108 Thiolase, N-terminal domain KAB01_01501 PF14535 AMP-binding enzyme C-terminal domain KAB01_01501 PF00501 AMP-binding enzyme KAB01_01502 PF08223 PaaX-like protein C-terminal domain KAB01_01502 PF07848 PaaX-like protein KAB01_01503 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_01504 PF03061 Thioesterase superfamily KAB01_01511 PF00199 Catalase KAB01_01512 PF01292 Prokaryotic cytochrome b561 KAB01_01516 PF12697 Alpha/beta hydrolase family KAB01_01517 PF01613 Flavin reductase like domain KAB01_01518 PF00296 Luciferase-like monooxygenase KAB01_01519 PF00171 Aldehyde dehydrogenase family KAB01_01520 PF13737 Transposase DDE domain KAB01_01521 PF00171 Aldehyde dehydrogenase family KAB01_01522 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB01_01525 PF00171 Aldehyde dehydrogenase family KAB01_01526 PF02627 Carboxymuconolactone decarboxylase family KAB01_01527 PF03466 LysR substrate binding domain KAB01_01527 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01528 PF02525 Flavodoxin-like fold KAB01_01529 PF01614 Bacterial transcriptional regulator KAB01_01529 PF09339 IclR helix-turn-helix domain KAB01_01530 PF01494 FAD binding domain KAB01_01531 PF07702 UTRA domain KAB01_01531 PF00392 Bacterial regulatory proteins, gntR family KAB01_01533 PF00005 ABC transporter KAB01_01533 PF08402 TOBE domain KAB01_01534 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01535 PF01266 FAD dependent oxidoreductase KAB01_01536 PF00266 Aminotransferase class-V KAB01_01537 PF13419 Haloacid dehalogenase-like hydrolase KAB01_01538 PF07690 Major Facilitator Superfamily KAB01_01539 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01539 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01539 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01540 PF02515 CoA-transferase family III KAB01_01541 PF09339 IclR helix-turn-helix domain KAB01_01542 PF00378 Enoyl-CoA hydratase/isomerase KAB01_01543 PF03060 Nitronate monooxygenase KAB01_01544 PF07690 Major Facilitator Superfamily KAB01_01545 PF09339 IclR helix-turn-helix domain KAB01_01546 PF00108 Thiolase, N-terminal domain KAB01_01546 PF02803 Thiolase, C-terminal domain KAB01_01547 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB01_01547 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB01_01547 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB01_01549 PF00378 Enoyl-CoA hydratase/isomerase KAB01_01550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01550 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01551 PF07690 Major Facilitator Superfamily KAB01_01552 PF01144 Coenzyme A transferase KAB01_01553 PF01144 Coenzyme A transferase KAB01_01555 PF07690 Major Facilitator Superfamily KAB01_01557 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01557 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01557 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB01_01557 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01560 PF03466 LysR substrate binding domain KAB01_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01561 PF00682 HMGL-like KAB01_01562 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB01_01562 PF00364 Biotin-requiring enzyme KAB01_01562 PF00289 Biotin carboxylase, N-terminal domain KAB01_01562 PF02785 Biotin carboxylase C-terminal domain KAB01_01563 PF00378 Enoyl-CoA hydratase/isomerase KAB01_01564 PF01039 Carboxyl transferase domain KAB01_01565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01565 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01566 PF00440 Bacterial regulatory proteins, tetR family KAB01_01567 PF13193 AMP-binding enzyme C-terminal domain KAB01_01567 PF00501 AMP-binding enzyme KAB01_01571 PF03466 LysR substrate binding domain KAB01_01571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01579 PF02464 Competence-damaged protein KAB01_01579 PF18146 Damage-inducible protein CinA KH domain KAB01_01579 PF00994 Probable molybdopterin binding domain KAB01_01581 PF00199 Catalase KAB01_01581 PF06628 Catalase-related immune-responsive KAB01_01581 PF18011 C-terminal domain found in long catalases KAB01_01583 PF13737 Transposase DDE domain KAB01_01588 PF00717 Peptidase S24-like KAB01_01590 PF01037 Lrp/AsnC ligand binding domain KAB01_01590 PF13404 AsnC-type helix-turn-helix domain KAB01_01592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_01592 PF00512 His Kinase A (phospho-acceptor) domain KAB01_01592 PF00072 Response regulator receiver domain KAB01_01592 PF09308 LuxQ, periplasmic KAB01_01593 PF00072 Response regulator receiver domain KAB01_01595 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01596 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01597 PF00005 ABC transporter KAB01_01598 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB01_01599 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB01_01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01600 PF03466 LysR substrate binding domain KAB01_01601 PF01810 LysE type translocator KAB01_01602 PF00266 Aminotransferase class-V KAB01_01604 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_01605 PF00581 Rhodanese-like domain KAB01_01607 PF03466 LysR substrate binding domain KAB01_01607 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01608 PF02798 Glutathione S-transferase, N-terminal domain KAB01_01609 PF02798 Glutathione S-transferase, N-terminal domain KAB01_01609 PF14834 Glutathione S-transferase, C-terminal domain KAB01_01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01610 PF03466 LysR substrate binding domain KAB01_01611 PF03788 LrgA family KAB01_01612 PF04172 LrgB-like family KAB01_01613 PF00155 Aminotransferase class I and II KAB01_01613 PF00392 Bacterial regulatory proteins, gntR family KAB01_01616 PF07690 Major Facilitator Superfamily KAB01_01617 PF16957 Malonate decarboxylase, alpha subunit, transporter KAB01_01618 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KAB01_01619 PF06857 Malonate decarboxylase delta subunit (MdcD) KAB01_01620 PF01039 Carboxyl transferase domain KAB01_01622 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KAB01_01623 PF00698 Acyl transferase domain KAB01_01626 PF03466 LysR substrate binding domain KAB01_01626 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01627 PF00155 Aminotransferase class I and II KAB01_01627 PF00392 Bacterial regulatory proteins, gntR family KAB01_01629 PF02322 Cytochrome bd terminal oxidase subunit II KAB01_01630 PF01654 Cytochrome bd terminal oxidase subunit I KAB01_01632 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01632 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01632 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01633 PF00296 Luciferase-like monooxygenase KAB01_01634 PF00083 Sugar (and other) transporter KAB01_01637 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB01_01638 PF00005 ABC transporter KAB01_01639 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01640 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KAB01_01641 PF01177 Asp/Glu/Hydantoin racemase KAB01_01642 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB01_01644 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01644 PF03466 LysR substrate binding domain KAB01_01646 PF13382 Adenine deaminase C-terminal domain KAB01_01646 PF01979 Amidohydrolase family KAB01_01648 PF03960 ArsC family KAB01_01649 PF01022 Bacterial regulatory protein, arsR family KAB01_01650 PF01758 Sodium Bile acid symporter family KAB01_01651 PF03466 LysR substrate binding domain KAB01_01651 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01654 PF13192 Thioredoxin domain KAB01_01654 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01657 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_01658 PF00588 SpoU rRNA Methylase family KAB01_01659 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAB01_01659 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAB01_01659 PF02811 PHP domain KAB01_01659 PF01336 OB-fold nucleic acid binding domain KAB01_01659 PF14579 Helix-hairpin-helix motif KAB01_01660 PF00710 Asparaginase, N-terminal KAB01_01660 PF17763 Glutaminase/Asparaginase C-terminal domain KAB01_01661 PF00375 Sodium:dicarboxylate symporter family KAB01_01662 PF00155 Aminotransferase class I and II KAB01_01663 PF01641 SelR domain KAB01_01664 PF00255 Glutathione peroxidase KAB01_01665 PF12852 Cupin KAB01_01665 PF12833 Helix-turn-helix domain KAB01_01667 PF00155 Aminotransferase class I and II KAB01_01668 PF01909 Nucleotidyltransferase domain KAB01_01668 PF01966 HD domain KAB01_01668 PF08335 GlnD PII-uridylyltransferase KAB01_01669 PF02222 ATP-grasp domain KAB01_01671 PF05437 Branched-chain amino acid transport protein (AzlD) KAB01_01672 PF03591 AzlC protein KAB01_01677 PF01926 50S ribosome-binding GTPase KAB01_01677 PF06071 Protein of unknown function (DUF933) KAB01_01678 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01679 PF00005 ABC transporter KAB01_01679 PF09383 NIL domain KAB01_01680 PF03180 NLPA lipoprotein KAB01_01681 PF03180 NLPA lipoprotein KAB01_01682 PF00296 Luciferase-like monooxygenase KAB01_01684 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01684 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01687 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01688 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01689 PF00005 ABC transporter KAB01_01692 PF01037 Lrp/AsnC ligand binding domain KAB01_01693 PF01709 Transcriptional regulator KAB01_01695 PF00440 Bacterial regulatory proteins, tetR family KAB01_01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01700 PF03466 LysR substrate binding domain KAB01_01702 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB01_01704 PF00892 EamA-like transporter family KAB01_01708 PF13954 PapC N-terminal domain KAB01_01708 PF00577 Outer membrane usher protein KAB01_01708 PF13953 PapC C-terminal domain KAB01_01709 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB01_01709 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB01_01710 PF16970 Type-1 fimbrial protein, A KAB01_01713 PF06968 Biotin and Thiamin Synthesis associated domain KAB01_01713 PF04055 Radical SAM superfamily KAB01_01714 PF08331 Domain of unknown function (DUF1730) KAB01_01715 PF03853 YjeF-related protein N-terminus KAB01_01715 PF01256 Carbohydrate kinase KAB01_01716 PF02075 Crossover junction endodeoxyribonuclease RuvC KAB01_01719 PF00905 Penicillin binding protein transpeptidase domain KAB01_01723 PF02772 S-adenosylmethionine synthetase, central domain KAB01_01723 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAB01_01723 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAB01_01724 PF00456 Transketolase, thiamine diphosphate binding domain KAB01_01724 PF02780 Transketolase, C-terminal domain KAB01_01724 PF02779 Transketolase, pyrimidine binding domain KAB01_01726 PF04264 YceI-like domain KAB01_01728 PF09992 Phosphodiester glycosidase KAB01_01730 PF05958 tRNA (Uracil-5-)-methyltransferase KAB01_01731 PF04229 GrpB protein KAB01_01732 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KAB01_01732 PF01619 Proline dehydrogenase KAB01_01732 PF00171 Aldehyde dehydrogenase family KAB01_01732 PF14850 DNA-binding domain of Proline dehydrogenase KAB01_01733 PF01037 Lrp/AsnC ligand binding domain KAB01_01734 PF00474 Sodium:solute symporter family KAB01_01735 PF02146 Sir2 family KAB01_01736 PF01597 Glycine cleavage H-protein KAB01_01737 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB01_01737 PF12833 Helix-turn-helix domain KAB01_01739 PF00005 ABC transporter KAB01_01739 PF00664 ABC transporter transmembrane region KAB01_01740 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KAB01_01741 PF06912 Protein of unknown function (DUF1275) KAB01_01742 PF00375 Sodium:dicarboxylate symporter family KAB01_01747 PF08007 Cupin superfamily protein KAB01_01748 PF02545 Maf-like protein KAB01_01750 PF00162 Phosphoglycerate kinase KAB01_01752 PF01116 Fructose-bisphosphate aldolase class-II KAB01_01753 PF09312 SurA N-terminal domain KAB01_01753 PF00639 PPIC-type PPIASE domain KAB01_01754 PF04453 LPS transport system D KAB01_01754 PF03968 OstA-like protein KAB01_01755 PF01636 Phosphotransferase enzyme family KAB01_01756 PF00483 Nucleotidyl transferase KAB01_01757 PF02527 rRNA small subunit methyltransferase G KAB01_01758 PF13614 AAA domain KAB01_01759 PF17762 HTH domain found in ParB protein KAB01_01759 PF02195 ParB-like nuclease domain KAB01_01760 PF01618 MotA/TolQ/ExbB proton channel family KAB01_01762 PF00005 ABC transporter KAB01_01762 PF00664 ABC transporter transmembrane region KAB01_01763 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAB01_01764 PF02348 Cytidylyltransferase KAB01_01765 PF09115 DNA polymerase III, delta subunit, C terminal KAB01_01767 PF01026 TatD related DNase KAB01_01770 PF02501 Type II secretion system (T2SS), protein I KAB01_01770 PF07963 Prokaryotic N-terminal methylation motif KAB01_01771 PF11612 Type II secretion system (T2SS), protein J KAB01_01771 PF07963 Prokaryotic N-terminal methylation motif KAB01_01772 PF03934 Type II secretion system (T2SS), protein K KAB01_01774 PF03167 Uracil DNA glycosylase superfamily KAB01_01776 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB01_01778 PF02224 Cytidylate kinase KAB01_01779 PF00575 S1 RNA binding domain KAB01_01780 PF00216 Bacterial DNA-binding protein KAB01_01782 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB01_01784 PF00743 Flavin-binding monooxygenase-like KAB01_01786 PF03969 AFG1-like ATPase KAB01_01787 PF01274 Malate synthase KAB01_01789 PF02472 Biopolymer transport protein ExbD/TolR KAB01_01790 PF02472 Biopolymer transport protein ExbD/TolR KAB01_01791 PF01618 MotA/TolQ/ExbB proton channel family KAB01_01793 PF07715 TonB-dependent Receptor Plug Domain KAB01_01793 PF00593 TonB dependent receptor KAB01_01797 PF01432 Peptidase family M3 KAB01_01798 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01799 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01800 PF00005 ABC transporter KAB01_01800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB01_01801 PF00005 ABC transporter KAB01_01801 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB01_01804 PF00459 Inositol monophosphatase family KAB01_01806 PF01649 Ribosomal protein S20 KAB01_01807 PF13460 NAD(P)H-binding KAB01_01808 PF03737 Aldolase/RraA KAB01_01812 PF17757 UvrB interaction domain KAB01_01812 PF03461 TRCF domain KAB01_01812 PF00271 Helicase conserved C-terminal domain KAB01_01812 PF00270 DEAD/DEAH box helicase KAB01_01812 PF02559 CarD-like/TRCF domain KAB01_01814 PF00211 Adenylate and Guanylate cyclase catalytic domain KAB01_01815 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_01816 PF00012 Hsp70 protein KAB01_01817 PF07743 HSCB C-terminal oligomerisation domain KAB01_01817 PF00226 DnaJ domain KAB01_01818 PF01521 Iron-sulphur cluster biosynthesis KAB01_01819 PF01592 NifU-like N terminal domain KAB01_01820 PF00266 Aminotransferase class-V KAB01_01821 PF02082 Transcriptional regulator KAB01_01824 PF00216 Bacterial DNA-binding protein KAB01_01825 PF09312 SurA N-terminal domain KAB01_01825 PF00639 PPIC-type PPIASE domain KAB01_01826 PF12852 Cupin KAB01_01826 PF12833 Helix-turn-helix domain KAB01_01827 PF00487 Fatty acid desaturase KAB01_01828 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01828 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01828 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01829 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_01829 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_01829 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_01830 PF03109 ABC1 family KAB01_01832 PF04073 Aminoacyl-tRNA editing domain KAB01_01833 PF04183 IucA / IucC family KAB01_01833 PF06276 Ferric iron reductase FhuF-like transporter KAB01_01834 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB01_01835 PF07690 Major Facilitator Superfamily KAB01_01836 PF04183 IucA / IucC family KAB01_01836 PF06276 Ferric iron reductase FhuF-like transporter KAB01_01837 PF06276 Ferric iron reductase FhuF-like transporter KAB01_01837 PF04183 IucA / IucC family KAB01_01840 PF07715 TonB-dependent Receptor Plug Domain KAB01_01840 PF00593 TonB dependent receptor KAB01_01845 PF13419 Haloacid dehalogenase-like hydrolase KAB01_01847 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KAB01_01848 PF02277 Phosphoribosyltransferase KAB01_01851 PF02654 Cobalamin-5-phosphate synthase KAB01_01852 PF00793 DAHP synthetase I family KAB01_01853 PF01925 Sulfite exporter TauE/SafE KAB01_01857 PF00593 TonB dependent receptor KAB01_01857 PF07715 TonB-dependent Receptor Plug Domain KAB01_01858 PF02684 Lipid-A-disaccharide synthetase KAB01_01860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_01861 PF00005 ABC transporter KAB01_01868 PF01230 HIT domain KAB01_01874 PF08241 Methyltransferase domain KAB01_01875 PF00561 alpha/beta hydrolase fold KAB01_01876 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB01_01878 PF02575 YbaB/EbfC DNA-binding family KAB01_01879 PF02132 RecR protein KAB01_01879 PF13662 Toprim domain KAB01_01880 PF00570 HRDC domain KAB01_01880 PF01612 3'-5' exonuclease KAB01_01884 PF05166 YcgL domain KAB01_01886 PF01434 Peptidase family M41 KAB01_01886 PF17862 AAA+ lid domain KAB01_01886 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_01888 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_01889 PF05175 Methyltransferase small domain KAB01_01890 PF01264 Chorismate synthase KAB01_01891 PF00990 Diguanylate cyclase, GGDEF domain KAB01_01891 PF08448 PAS fold KAB01_01894 PF04055 Radical SAM superfamily KAB01_01895 PF00676 Dehydrogenase E1 component KAB01_01896 PF02779 Transketolase, pyrimidine binding domain KAB01_01896 PF02780 Transketolase, C-terminal domain KAB01_01897 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB01_01897 PF00364 Biotin-requiring enzyme KAB01_01897 PF02817 e3 binding domain KAB01_01898 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_01898 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB01_01899 PF00106 short chain dehydrogenase KAB01_01902 PF00106 short chain dehydrogenase KAB01_01903 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_01903 PF00107 Zinc-binding dehydrogenase KAB01_01904 PF01062 Bestrophin, RFP-TM, chloride channel KAB01_01905 PF02954 Bacterial regulatory protein, Fis family KAB01_01905 PF00072 Response regulator receiver domain KAB01_01905 PF00158 Sigma-54 interaction domain KAB01_01906 PF04273 Putative phosphatase (DUF442) KAB01_01906 PF00753 Metallo-beta-lactamase superfamily KAB01_01907 PF04273 Putative phosphatase (DUF442) KAB01_01907 PF00753 Metallo-beta-lactamase superfamily KAB01_01908 PF01925 Sulfite exporter TauE/SafE KAB01_01911 PF12833 Helix-turn-helix domain KAB01_01911 PF06445 GyrI-like small molecule binding domain KAB01_01912 PF01638 HxlR-like helix-turn-helix KAB01_01913 PF02525 Flavodoxin-like fold KAB01_01918 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB01_01919 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01920 PF00005 ABC transporter KAB01_01923 PF00083 Sugar (and other) transporter KAB01_01924 PF00593 TonB dependent receptor KAB01_01924 PF07715 TonB-dependent Receptor Plug Domain KAB01_01925 PF10415 Fumarase C C-terminus KAB01_01925 PF00206 Lyase KAB01_01928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01928 PF03466 LysR substrate binding domain KAB01_01929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01929 PF03466 LysR substrate binding domain KAB01_01930 PF00108 Thiolase, N-terminal domain KAB01_01930 PF02803 Thiolase, C-terminal domain KAB01_01931 PF02667 Short chain fatty acid transporter KAB01_01932 PF01144 Coenzyme A transferase KAB01_01933 PF01144 Coenzyme A transferase KAB01_01934 PF03466 LysR substrate binding domain KAB01_01934 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01940 PF12833 Helix-turn-helix domain KAB01_01940 PF06719 AraC-type transcriptional regulator N-terminus KAB01_01941 PF07690 Major Facilitator Superfamily KAB01_01942 PF07690 Major Facilitator Superfamily KAB01_01943 PF01738 Dienelactone hydrolase family KAB01_01946 PF01613 Flavin reductase like domain KAB01_01948 PF12833 Helix-turn-helix domain KAB01_01948 PF14525 AraC-binding-like domain KAB01_01949 PF00970 Oxidoreductase FAD-binding domain KAB01_01949 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_01949 PF00175 Oxidoreductase NAD-binding domain KAB01_01950 PF00866 Ring hydroxylating beta subunit KAB01_01951 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB01_01951 PF00355 Rieske [2Fe-2S] domain KAB01_01952 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_01952 PF03459 TOBE domain KAB01_01954 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_01955 PF00005 ABC transporter KAB01_01955 PF03459 TOBE domain KAB01_01956 PF00106 short chain dehydrogenase KAB01_01957 PF00857 Isochorismatase family KAB01_01957 PF00550 Phosphopantetheine attachment site KAB01_01959 PF00149 Calcineurin-like phosphoesterase KAB01_01960 PF17941 Polyphosphate kinase C-terminal domain 1 KAB01_01960 PF13090 Polyphosphate kinase C-terminal domain 2 KAB01_01960 PF02503 Polyphosphate kinase middle domain KAB01_01960 PF13089 Polyphosphate kinase N-terminal domain KAB01_01961 PF12706 Beta-lactamase superfamily domain KAB01_01962 PF03070 TENA/THI-4/PQQC family KAB01_01963 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KAB01_01964 PF13186 Iron-sulfur cluster-binding domain KAB01_01964 PF04055 Radical SAM superfamily KAB01_01965 PF01244 Membrane dipeptidase (Peptidase family M19) KAB01_01969 PF13091 PLD-like domain KAB01_01972 PF00199 Catalase KAB01_01974 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_01974 PF00107 Zinc-binding dehydrogenase KAB01_01976 PF00419 Fimbrial protein KAB01_01977 PF13954 PapC N-terminal domain KAB01_01977 PF00577 Outer membrane usher protein KAB01_01977 PF13953 PapC C-terminal domain KAB01_01978 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB01_01978 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB01_01981 PF16970 Type-1 fimbrial protein, A KAB01_01982 PF13737 Transposase DDE domain KAB01_01986 PF01266 FAD dependent oxidoreductase KAB01_01989 PF01593 Flavin containing amine oxidoreductase KAB01_01990 PF00743 Flavin-binding monooxygenase-like KAB01_01991 PF12146 Serine aminopeptidase, S33 KAB01_01992 PF02321 Outer membrane efflux protein KAB01_01993 PF00873 AcrB/AcrD/AcrF family KAB01_01994 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_01994 PF00529 HlyD membrane-fusion protein of T1SS KAB01_01995 PF00486 Transcriptional regulatory protein, C terminal KAB01_01995 PF00072 Response regulator receiver domain KAB01_01996 PF16527 Two-component sensor protein CpxA, periplasmic domain KAB01_01996 PF00672 HAMP domain KAB01_01996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_01996 PF00512 His Kinase A (phospho-acceptor) domain KAB01_01998 PF02311 AraC-like ligand binding domain KAB01_01998 PF12833 Helix-turn-helix domain KAB01_01999 PF12146 Serine aminopeptidase, S33 KAB01_02010 PF13291 ACT domain KAB01_02010 PF02824 TGS domain KAB01_02010 PF04607 Region found in RelA / SpoT proteins KAB01_02012 PF01975 Survival protein SurE KAB01_02017 PF07690 Major Facilitator Superfamily KAB01_02018 PF13533 Biotin-lipoyl like KAB01_02019 PF01425 Amidase KAB01_02020 PF00196 Bacterial regulatory proteins, luxR family KAB01_02034 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB01_02035 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB01_02035 PF14572 Phosphoribosyl synthetase-associated domain KAB01_02039 PF00005 ABC transporter KAB01_02042 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_02042 PF00107 Zinc-binding dehydrogenase KAB01_02045 PF12833 Helix-turn-helix domain KAB01_02045 PF06719 AraC-type transcriptional regulator N-terminus KAB01_02046 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB01_02046 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB01_02047 PF07690 Major Facilitator Superfamily KAB01_02048 PF01370 NAD dependent epimerase/dehydratase family KAB01_02049 PF03466 LysR substrate binding domain KAB01_02049 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02051 PF00920 Dehydratase family KAB01_02052 PF00171 Aldehyde dehydrogenase family KAB01_02055 PF00529 HlyD membrane-fusion protein of T1SS KAB01_02055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_02059 PF03737 Aldolase/RraA KAB01_02060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB01_02060 PF01842 ACT domain KAB01_02060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB01_02061 PF07690 Major Facilitator Superfamily KAB01_02065 PF03466 LysR substrate binding domain KAB01_02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02067 PF08450 SMP-30/Gluconolactonase/LRE-like region KAB01_02070 PF04909 Amidohydrolase KAB01_02071 PF07690 Major Facilitator Superfamily KAB01_02075 PF13737 Transposase DDE domain KAB01_02076 PF05860 haemagglutination activity domain KAB01_02076 PF04829 Pre-toxin domain with VENN motif KAB01_02076 PF13332 Hemagglutinin repeat KAB01_02076 PF13018 Extended Signal Peptide of Type V secretion system KAB01_02077 PF08479 POTRA domain, ShlB-type KAB01_02077 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KAB01_02077 PF17287 POTRA domain KAB01_02079 PF07687 Peptidase dimerisation domain KAB01_02079 PF01546 Peptidase family M20/M25/M40 KAB01_02081 PF00999 Sodium/hydrogen exchanger family KAB01_02081 PF02254 TrkA-N domain KAB01_02082 PF07995 Glucose / Sorbosone dehydrogenase KAB01_02083 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02083 PF03466 LysR substrate binding domain KAB01_02084 PF00857 Isochorismatase family KAB01_02086 PF08359 YsiA-like protein, C-terminal region KAB01_02086 PF00440 Bacterial regulatory proteins, tetR family KAB01_02087 PF12706 Beta-lactamase superfamily domain KAB01_02089 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02091 PF09278 MerR, DNA binding KAB01_02091 PF00376 MerR family regulatory protein KAB01_02092 PF01872 RibD C-terminal domain KAB01_02093 PF00106 short chain dehydrogenase KAB01_02094 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02094 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB01_02095 PF01047 MarR family KAB01_02096 PF07859 alpha/beta hydrolase fold KAB01_02099 PF00199 Catalase KAB01_02099 PF06628 Catalase-related immune-responsive KAB01_02100 PF00561 alpha/beta hydrolase fold KAB01_02102 PF00171 Aldehyde dehydrogenase family KAB01_02103 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_02103 PF00107 Zinc-binding dehydrogenase KAB01_02104 PF00474 Sodium:solute symporter family KAB01_02105 PF04341 Protein of unknown function, DUF485 KAB01_02106 PF13193 AMP-binding enzyme C-terminal domain KAB01_02106 PF00501 AMP-binding enzyme KAB01_02107 PF06506 Propionate catabolism activator KAB01_02107 PF02954 Bacterial regulatory protein, Fis family KAB01_02107 PF00158 Sigma-54 interaction domain KAB01_02109 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_02109 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02109 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_02114 PF00171 Aldehyde dehydrogenase family KAB01_02116 PF07690 Major Facilitator Superfamily KAB01_02117 PF00920 Dehydratase family KAB01_02118 PF07729 FCD domain KAB01_02118 PF00392 Bacterial regulatory proteins, gntR family KAB01_02120 PF03466 LysR substrate binding domain KAB01_02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02121 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB01_02121 PF13378 Enolase C-terminal domain-like KAB01_02122 PF02426 Muconolactone delta-isomerase KAB01_02123 PF04444 Catechol dioxygenase N terminus KAB01_02123 PF00775 Dioxygenase KAB01_02124 PF01144 Coenzyme A transferase KAB01_02125 PF01144 Coenzyme A transferase KAB01_02126 PF00108 Thiolase, N-terminal domain KAB01_02126 PF02803 Thiolase, C-terminal domain KAB01_02127 PF12146 Serine aminopeptidase, S33 KAB01_02128 PF01804 Penicillin amidase KAB01_02129 PF00171 Aldehyde dehydrogenase family KAB01_02131 PF07833 Copper amine oxidase N-terminal domain KAB01_02131 PF02727 Copper amine oxidase, N2 domain KAB01_02131 PF01179 Copper amine oxidase, enzyme domain KAB01_02131 PF02728 Copper amine oxidase, N3 domain KAB01_02132 PF12833 Helix-turn-helix domain KAB01_02132 PF02311 AraC-like ligand binding domain KAB01_02133 PF01613 Flavin reductase like domain KAB01_02134 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_02134 PF00175 Oxidoreductase NAD-binding domain KAB01_02137 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB01_02137 PF00355 Rieske [2Fe-2S] domain KAB01_02140 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02141 PF01425 Amidase KAB01_02143 PF07690 Major Facilitator Superfamily KAB01_02145 PF00106 short chain dehydrogenase KAB01_02148 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_02148 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_02148 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02149 PF03466 LysR substrate binding domain KAB01_02149 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02150 PF09339 IclR helix-turn-helix domain KAB01_02150 PF01614 Bacterial transcriptional regulator KAB01_02151 PF00753 Metallo-beta-lactamase superfamily KAB01_02153 PF04143 Sulphur transport KAB01_02155 PF01011 PQQ enzyme repeat KAB01_02155 PF13360 PQQ-like domain KAB01_02156 PF04966 Carbohydrate-selective porin, OprB family KAB01_02157 PF05048 Periplasmic copper-binding protein (NosD) KAB01_02158 PF01487 Type I 3-dehydroquinase KAB01_02159 PF00775 Dioxygenase KAB01_02160 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KAB01_02160 PF00775 Dioxygenase KAB01_02161 PF02627 Carboxymuconolactone decarboxylase family KAB01_02162 PF07690 Major Facilitator Superfamily KAB01_02163 PF00561 alpha/beta hydrolase fold KAB01_02164 PF00206 Lyase KAB01_02164 PF10397 Adenylosuccinate lyase C-terminus KAB01_02165 PF00108 Thiolase, N-terminal domain KAB01_02165 PF02803 Thiolase, C-terminal domain KAB01_02166 PF01144 Coenzyme A transferase KAB01_02167 PF01144 Coenzyme A transferase KAB01_02168 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAB01_02169 PF04977 Septum formation initiator KAB01_02170 PF04239 Protein of unknown function (DUF421) KAB01_02171 PF00113 Enolase, C-terminal TIM barrel domain KAB01_02171 PF03952 Enolase, N-terminal domain KAB01_02172 PF00793 DAHP synthetase I family KAB01_02173 PF06418 CTP synthase N-terminus KAB01_02173 PF00117 Glutamine amidotransferase class-I KAB01_02179 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02179 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB01_02182 PF00793 DAHP synthetase I family KAB01_02183 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KAB01_02184 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_02184 PF10431 C-terminal, D2-small domain, of ClpB protein KAB01_02184 PF02861 Clp amino terminal domain, pathogenicity island component KAB01_02184 PF17871 AAA lid domain KAB01_02184 PF07724 AAA domain (Cdc48 subfamily) KAB01_02185 PF02617 ATP-dependent Clp protease adaptor protein ClpS KAB01_02187 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB01_02187 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB01_02190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAB01_02191 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_02191 PF00585 C-terminal regulatory domain of Threonine dehydratase KAB01_02192 PF02080 TrkA-C domain KAB01_02192 PF02254 TrkA-N domain KAB01_02193 PF02386 Cation transport protein KAB01_02194 PF02253 Phospholipase A1 KAB01_02195 PF08367 Peptidase M16C associated KAB01_02195 PF05193 Peptidase M16 inactive domain KAB01_02195 PF00675 Insulinase (Peptidase family M16) KAB01_02196 PF00593 TonB dependent receptor KAB01_02196 PF07715 TonB-dependent Receptor Plug Domain KAB01_02197 PF00294 pfkB family carbohydrate kinase KAB01_02199 PF07290 Protein of unknown function (DUF1449) KAB01_02200 PF13737 Transposase DDE domain KAB01_02202 PF01654 Cytochrome bd terminal oxidase subunit I KAB01_02203 PF02322 Cytochrome bd terminal oxidase subunit II KAB01_02204 PF08173 Membrane bound YbgT-like protein KAB01_02207 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KAB01_02209 PF02881 SRP54-type protein, helical bundle domain KAB01_02209 PF00448 SRP54-type protein, GTPase domain KAB01_02214 PF00571 CBS domain KAB01_02214 PF00478 IMP dehydrogenase / GMP reductase domain KAB01_02215 PF00202 Aminotransferase class-III KAB01_02216 PF00462 Glutaredoxin KAB01_02218 PF03466 LysR substrate binding domain KAB01_02218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02219 PF00557 Metallopeptidase family M24 KAB01_02220 PF05525 Branched-chain amino acid transport protein KAB01_02225 PF05524 PEP-utilising enzyme, N-terminal KAB01_02225 PF00381 PTS HPr component phosphorylation site KAB01_02225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAB01_02225 PF00391 PEP-utilising enzyme, mobile domain KAB01_02225 PF02896 PEP-utilising enzyme, TIM barrel domain KAB01_02226 PF00294 pfkB family carbohydrate kinase KAB01_02227 PF02378 Phosphotransferase system, EIIC KAB01_02227 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAB01_02232 PF00563 EAL domain KAB01_02232 PF03707 Bacterial signalling protein N terminal repeat KAB01_02232 PF00990 Diguanylate cyclase, GGDEF domain KAB01_02234 PF07995 Glucose / Sorbosone dehydrogenase KAB01_02235 PF02586 SOS response associated peptidase (SRAP) KAB01_02236 PF00916 Sulfate permease family KAB01_02236 PF01740 STAS domain KAB01_02237 PF05922 Peptidase inhibitor I9 KAB01_02237 PF00082 Subtilase family KAB01_02239 PF00324 Amino acid permease KAB01_02240 PF00266 Aminotransferase class-V KAB01_02241 PF01037 Lrp/AsnC ligand binding domain KAB01_02246 PF13419 Haloacid dehalogenase-like hydrolase KAB01_02247 PF01479 S4 domain KAB01_02248 PF00154 recA bacterial DNA recombination protein KAB01_02249 PF02631 RecX family KAB01_02251 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_02251 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAB01_02252 PF07977 FabA-like domain KAB01_02253 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_02253 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAB01_02255 PF01103 Surface antigen KAB01_02255 PF07244 Surface antigen variable number repeat KAB01_02256 PF17820 PDZ domain KAB01_02256 PF02163 Peptidase family M50 KAB01_02256 PF13180 PDZ domain KAB01_02257 PF13288 DXP reductoisomerase C-terminal domain KAB01_02257 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAB01_02257 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAB01_02259 PF01255 Putative undecaprenyl diphosphate synthase KAB01_02260 PF01765 Ribosome recycling factor KAB01_02261 PF00696 Amino acid kinase family KAB01_02262 PF00919 Uncharacterized protein family UPF0004 KAB01_02262 PF18693 TRAM domain KAB01_02262 PF04055 Radical SAM superfamily KAB01_02263 PF00512 His Kinase A (phospho-acceptor) domain KAB01_02263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_02263 PF00989 PAS fold KAB01_02264 PF00158 Sigma-54 interaction domain KAB01_02264 PF02954 Bacterial regulatory protein, Fis family KAB01_02264 PF00072 Response regulator receiver domain KAB01_02265 PF00440 Bacterial regulatory proteins, tetR family KAB01_02266 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB01_02266 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB01_02268 PF02542 YgbB family KAB01_02270 PF01266 FAD dependent oxidoreductase KAB01_02274 PF10415 Fumarase C C-terminus KAB01_02274 PF00206 Lyase KAB01_02275 PF16363 GDP-mannose 4,6 dehydratase KAB01_02276 PF02635 DsrE/DsrF-like family KAB01_02280 PF00892 EamA-like transporter family KAB01_02281 PF00155 Aminotransferase class I and II KAB01_02281 PF00392 Bacterial regulatory proteins, gntR family KAB01_02282 PF01638 HxlR-like helix-turn-helix KAB01_02283 PF03453 MoeA N-terminal region (domain I and II) KAB01_02283 PF03454 MoeA C-terminal region (domain IV) KAB01_02283 PF00994 Probable molybdopterin binding domain KAB01_02284 PF01967 MoaC family KAB01_02284 PF00994 Probable molybdopterin binding domain KAB01_02285 PF02391 MoaE protein KAB01_02287 PF04055 Radical SAM superfamily KAB01_02287 PF06463 Molybdenum Cofactor Synthesis C KAB01_02288 PF01568 Molydopterin dinucleotide binding domain KAB01_02288 PF00384 Molybdopterin oxidoreductase KAB01_02288 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB01_02289 PF12804 MobA-like NTP transferase domain KAB01_02290 PF04324 BFD-like [2Fe-2S] binding domain KAB01_02290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB01_02290 PF00384 Molybdopterin oxidoreductase KAB01_02290 PF01568 Molydopterin dinucleotide binding domain KAB01_02291 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB01_02291 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB01_02291 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02291 PF04324 BFD-like [2Fe-2S] binding domain KAB01_02291 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB01_02292 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02292 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB01_02292 PF04324 BFD-like [2Fe-2S] binding domain KAB01_02292 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB01_02292 PF13806 Rieske-like [2Fe-2S] domain KAB01_02292 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB01_02294 PF00486 Transcriptional regulatory protein, C terminal KAB01_02294 PF00072 Response regulator receiver domain KAB01_02295 PF00005 ABC transporter KAB01_02296 PF13438 Domain of unknown function (DUF4113) KAB01_02296 PF00817 impB/mucB/samB family KAB01_02296 PF11799 impB/mucB/samB family C-terminal domain KAB01_02297 PF01220 Dehydroquinase class II KAB01_02298 PF00364 Biotin-requiring enzyme KAB01_02299 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB01_02299 PF00289 Biotin carboxylase, N-terminal domain KAB01_02299 PF02785 Biotin carboxylase C-terminal domain KAB01_02301 PF12832 MFS_1 like family KAB01_02303 PF13333 Integrase core domain KAB01_02303 PF00665 Integrase core domain KAB01_02303 PF13276 HTH-like domain KAB01_02315 PF01551 Peptidase family M23 KAB01_02315 PF01476 LysM domain KAB01_02315 PF08525 Opacity-associated protein A N-terminal motif KAB01_02324 PF13737 Transposase DDE domain KAB01_02355 PF01555 DNA methylase KAB01_02361 PF12161 HsdM N-terminal domain KAB01_02361 PF02384 N-6 DNA Methylase KAB01_02362 PF13737 Transposase DDE domain KAB01_02377 PF01645 Conserved region in glutamate synthase KAB01_02380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAB01_02380 PF01565 FAD binding domain KAB01_02381 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB01_02383 PF00465 Iron-containing alcohol dehydrogenase KAB01_02384 PF03061 Thioesterase superfamily KAB01_02385 PF04185 Phosphoesterase family KAB01_02385 PF05506 Domain of unknown function (DUF756) KAB01_02387 PF12169 DNA polymerase III subunits gamma and tau domain III KAB01_02387 PF12170 DNA polymerase III tau subunit V interacting with alpha KAB01_02387 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KAB01_02388 PF07690 Major Facilitator Superfamily KAB01_02393 PF02803 Thiolase, C-terminal domain KAB01_02393 PF00108 Thiolase, N-terminal domain KAB01_02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02395 PF03466 LysR substrate binding domain KAB01_02397 PF01810 LysE type translocator KAB01_02398 PF01037 Lrp/AsnC ligand binding domain KAB01_02399 PF03594 Benzoate membrane transport protein KAB01_02400 PF02308 MgtC family KAB01_02401 PF00689 Cation transporting ATPase, C-terminus KAB01_02401 PF00690 Cation transporter/ATPase, N-terminus KAB01_02406 PF00582 Universal stress protein family KAB01_02407 PF00005 ABC transporter KAB01_02407 PF12848 ABC transporter KAB01_02411 PF07715 TonB-dependent Receptor Plug Domain KAB01_02411 PF00593 TonB dependent receptor KAB01_02419 PF00924 Mechanosensitive ion channel KAB01_02420 PF07715 TonB-dependent Receptor Plug Domain KAB01_02420 PF00593 TonB dependent receptor KAB01_02421 PF00440 Bacterial regulatory proteins, tetR family KAB01_02423 PF01037 Lrp/AsnC ligand binding domain KAB01_02424 PF01817 Chorismate mutase type II KAB01_02430 PF00106 short chain dehydrogenase KAB01_02432 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KAB01_02432 PF01433 Peptidase family M1 domain KAB01_02432 PF11940 Domain of unknown function (DUF3458) Ig-like fold KAB01_02435 PF02110 Hydroxyethylthiazole kinase family KAB01_02436 PF06445 GyrI-like small molecule binding domain KAB01_02438 PF14493 Helix-turn-helix domain KAB01_02438 PF05970 PIF1-like helicase KAB01_02439 PF00465 Iron-containing alcohol dehydrogenase KAB01_02442 PF00171 Aldehyde dehydrogenase family KAB01_02443 PF13520 Amino acid permease KAB01_02444 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KAB01_02445 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KAB01_02446 PF02540 NAD synthase KAB01_02446 PF00117 Glutamine amidotransferase class-I KAB01_02446 PF00958 GMP synthase C terminal domain KAB01_02447 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAB01_02447 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB01_02448 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB01_02449 PF00149 Calcineurin-like phosphoesterase KAB01_02451 PF00881 Nitroreductase family KAB01_02453 PF17209 Hfq protein KAB01_02455 PF01119 DNA mismatch repair protein, C-terminal domain KAB01_02455 PF08676 MutL C terminal dimerisation domain KAB01_02456 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAB01_02457 PF01479 S4 domain KAB01_02457 PF00849 RNA pseudouridylate synthase KAB01_02460 PF00849 RNA pseudouridylate synthase KAB01_02460 PF01479 S4 domain KAB01_02462 PF04284 Protein of unknown function (DUF441) KAB01_02463 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02463 PF03466 LysR substrate binding domain KAB01_02466 PF07690 Major Facilitator Superfamily KAB01_02467 PF00027 Cyclic nucleotide-binding domain KAB01_02467 PF00520 Ion transport protein KAB01_02469 PF00330 Aconitase family (aconitate hydratase) KAB01_02469 PF06434 Aconitate hydratase 2 N-terminus KAB01_02469 PF11791 Aconitate B N-terminal domain KAB01_02472 PF07244 Surface antigen variable number repeat KAB01_02472 PF01103 Surface antigen KAB01_02472 PF17243 POTRA domain TamA domain 1 KAB01_02473 PF07690 Major Facilitator Superfamily KAB01_02474 PF03232 Ubiquinone biosynthesis protein COQ7 KAB01_02476 PF00120 Glutamine synthetase, catalytic domain KAB01_02477 PF00072 Response regulator receiver domain KAB01_02477 PF00486 Transcriptional regulatory protein, C terminal KAB01_02478 PF00512 His Kinase A (phospho-acceptor) domain KAB01_02478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_02478 PF02702 Osmosensitive K+ channel His kinase sensor domain KAB01_02478 PF13493 Domain of unknown function (DUF4118) KAB01_02479 PF02669 K+-transporting ATPase, c chain KAB01_02481 PF03814 Potassium-transporting ATPase A subunit KAB01_02484 PF03109 ABC1 family KAB01_02485 PF00899 ThiF family KAB01_02486 PF01613 Flavin reductase like domain KAB01_02487 PF13193 AMP-binding enzyme C-terminal domain KAB01_02487 PF00501 AMP-binding enzyme KAB01_02488 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_02488 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_02489 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02489 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_02489 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_02490 PF00106 short chain dehydrogenase KAB01_02491 PF12833 Helix-turn-helix domain KAB01_02492 PF09084 NMT1/THI5 like KAB01_02493 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02494 PF17827 PrmC N-terminal domain KAB01_02494 PF13847 Methyltransferase domain KAB01_02495 PF00472 RF-1 domain KAB01_02495 PF03462 PCRF domain KAB01_02497 PF03466 LysR substrate binding domain KAB01_02497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02500 PF00296 Luciferase-like monooxygenase KAB01_02502 PF13994 PgaD-like protein KAB01_02503 PF00535 Glycosyl transferase family 2 KAB01_02504 PF14883 Hypothetical glycosyl hydrolase family 13 KAB01_02504 PF01522 Polysaccharide deacetylase KAB01_02506 PF13737 Transposase DDE domain KAB01_02508 PF03618 Kinase/pyrophosphorylase KAB01_02509 PF00391 PEP-utilising enzyme, mobile domain KAB01_02509 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAB01_02509 PF02896 PEP-utilising enzyme, TIM barrel domain KAB01_02511 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAB01_02511 PF06481 COX Aromatic Rich Motif KAB01_02512 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAB01_02513 PF00510 Cytochrome c oxidase subunit III KAB01_02514 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KAB01_02515 PF01040 UbiA prenyltransferase family KAB01_02516 PF01250 Ribosomal protein S6 KAB01_02517 PF01084 Ribosomal protein S18 KAB01_02518 PF03948 Ribosomal protein L9, C-terminal domain KAB01_02518 PF01281 Ribosomal protein L9, N-terminal domain KAB01_02519 PF03796 DnaB-like helicase C terminal domain KAB01_02519 PF00772 DnaB-like helicase N terminal domain KAB01_02520 PF01168 Alanine racemase, N-terminal domain KAB01_02520 PF00842 Alanine racemase, C-terminal domain KAB01_02522 PF08379 Bacterial transglutaminase-like N-terminal region KAB01_02522 PF01841 Transglutaminase-like superfamily KAB01_02524 PF14403 Circularly permuted ATP-grasp type 2 KAB01_02526 PF13932 GidA associated domain KAB01_02526 PF01134 Glucose inhibited division protein A KAB01_02530 PF02954 Bacterial regulatory protein, Fis family KAB01_02531 PF01808 AICARFT/IMPCHase bienzyme KAB01_02531 PF02142 MGS-like domain KAB01_02532 PF02843 Phosphoribosylglycinamide synthetase, C domain KAB01_02532 PF02844 Phosphoribosylglycinamide synthetase, N domain KAB01_02532 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAB01_02533 PF03180 NLPA lipoprotein KAB01_02535 PF00005 ABC transporter KAB01_02535 PF09383 NIL domain KAB01_02536 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02537 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAB01_02537 PF00753 Metallo-beta-lactamase superfamily KAB01_02539 PF00375 Sodium:dicarboxylate symporter family KAB01_02542 PF13610 DDE domain KAB01_02543 PF00440 Bacterial regulatory proteins, tetR family KAB01_02543 PF02909 Tetracyclin repressor-like, C-terminal domain KAB01_02546 PF07091 Ribosomal RNA methyltransferase (FmrO) KAB01_02547 PF13737 Transposase DDE domain KAB01_02549 PF02470 MlaD protein KAB01_02550 PF04403 Paraquat-inducible protein A KAB01_02552 PF02080 TrkA-C domain KAB01_02552 PF06826 Predicted Permease Membrane Region KAB01_02553 PF00155 Aminotransferase class I and II KAB01_02556 PF00083 Sugar (and other) transporter KAB01_02556 PF08946 Osmosensory transporter coiled coil KAB01_02564 PF13737 Transposase DDE domain KAB01_02568 PF00392 Bacterial regulatory proteins, gntR family KAB01_02568 PF07729 FCD domain KAB01_02570 PF03616 Sodium/glutamate symporter KAB01_02571 PF00561 alpha/beta hydrolase fold KAB01_02576 PF04076 Bacterial OB fold (BOF) protein KAB01_02582 PF13737 Transposase DDE domain KAB01_02584 PF00324 Amino acid permease KAB01_02585 PF00171 Aldehyde dehydrogenase family KAB01_02586 PF00202 Aminotransferase class-III KAB01_02587 PF03466 LysR substrate binding domain KAB01_02587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02592 PF00069 Protein kinase domain KAB01_02596 PF00814 Glycoprotease family KAB01_02597 PF01165 Ribosomal protein S21 KAB01_02598 PF09424 Yqey-like protein KAB01_02599 PF01435 Peptidase family M48 KAB01_02600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB01_02600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB01_02604 PF00156 Phosphoribosyl transferase domain KAB01_02605 PF02674 Colicin V production protein KAB01_02606 PF01180 Dihydroorotate dehydrogenase KAB01_02610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAB01_02610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAB01_02611 PF00881 Nitroreductase family KAB01_02613 PF00270 DEAD/DEAH box helicase KAB01_02613 PF00271 Helicase conserved C-terminal domain KAB01_02614 PF00313 'Cold-shock' DNA-binding domain KAB01_02616 PF04542 Sigma-70 region 2 KAB01_02616 PF00140 Sigma-70 factor, region 1.2 KAB01_02616 PF04545 Sigma-70, region 4 KAB01_02617 PF04241 Protein of unknown function (DUF423) KAB01_02619 PF05690 Thiazole biosynthesis protein ThiG KAB01_02621 PF03883 Peroxide stress protein YaaA KAB01_02623 PF12706 Beta-lactamase superfamily domain KAB01_02624 PF07687 Peptidase dimerisation domain KAB01_02624 PF01546 Peptidase family M20/M25/M40 KAB01_02626 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB01_02627 PF01817 Chorismate mutase type II KAB01_02627 PF01842 ACT domain KAB01_02627 PF00800 Prephenate dehydratase KAB01_02628 PF00756 Putative esterase KAB01_02629 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02629 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_02629 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_02630 PF00375 Sodium:dicarboxylate symporter family KAB01_02631 PF02885 Glycosyl transferase family, helical bundle domain KAB01_02631 PF00591 Glycosyl transferase family, a/b domain KAB01_02632 PF07023 Protein of unknown function (DUF1315) KAB01_02633 PF01513 ATP-NAD kinase KAB01_02634 PF00912 Transglycosylase KAB01_02634 PF00905 Penicillin binding protein transpeptidase domain KAB01_02634 PF14814 Bifunctional transglycosylase second domain KAB01_02636 PF00293 NUDIX domain KAB01_02638 PF08521 Two-component sensor kinase N-terminal KAB01_02638 PF00512 His Kinase A (phospho-acceptor) domain KAB01_02638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_02639 PF00072 Response regulator receiver domain KAB01_02639 PF00486 Transcriptional regulatory protein, C terminal KAB01_02641 PF00437 Type II/IV secretion system protein KAB01_02643 PF01980 tRNA-methyltransferase O KAB01_02643 PF18389 TrmO C-terminal domain KAB01_02644 PF00175 Oxidoreductase NAD-binding domain KAB01_02644 PF00970 Oxidoreductase FAD-binding domain KAB01_02645 PF02567 Phenazine biosynthesis-like protein KAB01_02646 PF00392 Bacterial regulatory proteins, gntR family KAB01_02646 PF00155 Aminotransferase class I and II KAB01_02648 PF00037 4Fe-4S binding domain KAB01_02649 PF00893 Small Multidrug Resistance protein KAB01_02650 PF00005 ABC transporter KAB01_02651 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02652 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02653 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB01_02654 PF03466 LysR substrate binding domain KAB01_02654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02656 PF13533 Biotin-lipoyl like KAB01_02657 PF00873 AcrB/AcrD/AcrF family KAB01_02658 PF02321 Outer membrane efflux protein KAB01_02659 PF00464 Serine hydroxymethyltransferase KAB01_02665 PF00005 ABC transporter KAB01_02666 PF01061 ABC-2 type transporter KAB01_02667 PF14489 QueF-like protein KAB01_02667 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KAB01_02669 PF01098 Cell cycle protein KAB01_02670 PF13406 Transglycosylase SLT domain KAB01_02671 PF03330 Lytic transglycolase KAB01_02671 PF05036 Sporulation related domain KAB01_02675 PF12833 Helix-turn-helix domain KAB01_02677 PF00889 Elongation factor TS KAB01_02678 PF00318 Ribosomal protein S2 KAB01_02679 PF00557 Metallopeptidase family M24 KAB01_02681 PF07690 Major Facilitator Superfamily KAB01_02684 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02684 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB01_02685 PF04055 Radical SAM superfamily KAB01_02686 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_02686 PF09317 Domain of unknown function (DUF1974) KAB01_02686 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_02689 PF05221 S-adenosyl-L-homocysteine hydrolase KAB01_02689 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB01_02690 PF02219 Methylenetetrahydrofolate reductase KAB01_02691 PF04452 RNA methyltransferase KAB01_02692 PF00563 EAL domain KAB01_02692 PF00990 Diguanylate cyclase, GGDEF domain KAB01_02692 PF03707 Bacterial signalling protein N terminal repeat KAB01_02693 PF01515 Phosphate acetyl/butaryl transferase KAB01_02693 PF03949 Malic enzyme, NAD binding domain KAB01_02693 PF00390 Malic enzyme, N-terminal domain KAB01_02694 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB01_02694 PF01743 Poly A polymerase head domain KAB01_02695 PF13180 PDZ domain KAB01_02696 PF01784 NIF3 (NGG1p interacting factor 3) KAB01_02697 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAB01_02697 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAB01_02704 PF01040 UbiA prenyltransferase family KAB01_02705 PF04345 Chorismate lyase KAB01_02707 PF00854 POT family KAB01_02709 PF00117 Glutamine amidotransferase class-I KAB01_02710 PF01433 Peptidase family M1 domain KAB01_02710 PF11838 ERAP1-like C-terminal domain KAB01_02711 PF00593 TonB dependent receptor KAB01_02711 PF07715 TonB-dependent Receptor Plug Domain KAB01_02712 PF02885 Glycosyl transferase family, helical bundle domain KAB01_02712 PF00591 Glycosyl transferase family, a/b domain KAB01_02713 PF00218 Indole-3-glycerol phosphate synthase KAB01_02716 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB01_02716 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAB01_02717 PF01799 [2Fe-2S] binding domain KAB01_02717 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_02721 PF00144 Beta-lactamase KAB01_02724 PF05675 Protein of unknown function (DUF817) KAB01_02725 PF01208 Uroporphyrinogen decarboxylase (URO-D) KAB01_02727 PF00425 chorismate binding enzyme KAB01_02729 PF00975 Thioesterase domain KAB01_02730 PF00005 ABC transporter KAB01_02730 PF00664 ABC transporter transmembrane region KAB01_02731 PF00664 ABC transporter transmembrane region KAB01_02731 PF00005 ABC transporter KAB01_02733 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB01_02734 PF00550 Phosphopantetheine attachment site KAB01_02734 PF00857 Isochorismatase family KAB01_02735 PF13193 AMP-binding enzyme C-terminal domain KAB01_02735 PF00501 AMP-binding enzyme KAB01_02736 PF00550 Phosphopantetheine attachment site KAB01_02736 PF00668 Condensation domain KAB01_02736 PF00501 AMP-binding enzyme KAB01_02737 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB01_02738 PF07715 TonB-dependent Receptor Plug Domain KAB01_02738 PF00593 TonB dependent receptor KAB01_02739 PF01497 Periplasmic binding protein KAB01_02740 PF00005 ABC transporter KAB01_02741 PF01032 FecCD transport family KAB01_02742 PF01032 FecCD transport family KAB01_02745 PF00550 Phosphopantetheine attachment site KAB01_02745 PF13193 AMP-binding enzyme C-terminal domain KAB01_02745 PF00501 AMP-binding enzyme KAB01_02745 PF00975 Thioesterase domain KAB01_02745 PF00668 Condensation domain KAB01_02746 PF00501 AMP-binding enzyme KAB01_02746 PF00550 Phosphopantetheine attachment site KAB01_02746 PF00668 Condensation domain KAB01_02746 PF13193 AMP-binding enzyme C-terminal domain KAB01_02748 PF08348 YheO-like PAS domain KAB01_02748 PF13309 HTH domain KAB01_02749 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_02750 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_02751 PF17954 Quercetinase C-terminal cupin domain KAB01_02751 PF02678 Pirin KAB01_02754 PF13737 Transposase DDE domain KAB01_02758 PF00392 Bacterial regulatory proteins, gntR family KAB01_02758 PF07729 FCD domain KAB01_02760 PF03616 Sodium/glutamate symporter KAB01_02761 PF00561 alpha/beta hydrolase fold KAB01_02766 PF04076 Bacterial OB fold (BOF) protein KAB01_02772 PF13737 Transposase DDE domain KAB01_02773 PF00440 Bacterial regulatory proteins, tetR family KAB01_02774 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_02774 PF16197 Ketoacyl-synthetase C-terminal extension KAB01_02774 PF00698 Acyl transferase domain KAB01_02774 PF09277 Erythronolide synthase, docking KAB01_02774 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_02774 PF08990 Erythronolide synthase docking KAB01_02774 PF08659 KR domain KAB01_02774 PF00550 Phosphopantetheine attachment site KAB01_02774 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_02774 PF14765 Polyketide synthase dehydratase KAB01_02775 PF13378 Enolase C-terminal domain-like KAB01_02775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB01_02776 PF00083 Sugar (and other) transporter KAB01_02777 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KAB01_02779 PF00892 EamA-like transporter family KAB01_02783 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB01_02783 PF01266 FAD dependent oxidoreductase KAB01_02784 PF18113 Rubredoxin binding C-terminal domain KAB01_02784 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02786 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB01_02786 PF00355 Rieske [2Fe-2S] domain KAB01_02787 PF02028 BCCT, betaine/carnitine/choline family transporter KAB01_02788 PF02028 BCCT, betaine/carnitine/choline family transporter KAB01_02789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02789 PF03466 LysR substrate binding domain KAB01_02790 PF00324 Amino acid permease KAB01_02791 PF00171 Aldehyde dehydrogenase family KAB01_02794 PF17853 GGDEF-like domain KAB01_02794 PF06018 CodY GAF-like domain KAB01_02794 PF13556 PucR C-terminal helix-turn-helix domain KAB01_02801 PF04328 Selenoprotein, putative KAB01_02802 PF02554 Carbon starvation protein CstA KAB01_02802 PF13722 5TM C-terminal transporter carbon starvation CstA KAB01_02803 PF08207 Elongation factor P (EF-P) KOW-like domain KAB01_02803 PF01132 Elongation factor P (EF-P) OB domain KAB01_02803 PF09285 Elongation factor P, C-terminal KAB01_02804 PF04055 Radical SAM superfamily KAB01_02807 PF01197 Ribosomal protein L31 KAB01_02808 PF13593 SBF-like CPA transporter family (DUF4137) KAB01_02809 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB01_02810 PF07690 Major Facilitator Superfamily KAB01_02811 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB01_02811 PF13654 AAA domain KAB01_02812 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02812 PF03466 LysR substrate binding domain KAB01_02813 PF01551 Peptidase family M23 KAB01_02813 PF01476 LysM domain KAB01_02814 PF01975 Survival protein SurE KAB01_02817 PF07943 Penicillin-binding protein 5, C-terminal domain KAB01_02817 PF00768 D-alanyl-D-alanine carboxypeptidase KAB01_02818 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_02819 PF13344 Haloacid dehalogenase-like hydrolase KAB01_02819 PF00293 NUDIX domain KAB01_02821 PF04356 Protein of unknown function (DUF489) KAB01_02822 PF08328 Adenylosuccinate lyase C-terminal KAB01_02822 PF00206 Lyase KAB01_02824 PF00872 Transposase, Mutator family KAB01_02826 PF08496 Peptidase family S49 N-terminal KAB01_02826 PF01343 Peptidase family S49 KAB01_02827 PF00005 ABC transporter KAB01_02828 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02829 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02830 PF12849 PBP superfamily domain KAB01_02831 PF00324 Amino acid permease KAB01_02832 PF00205 Thiamine pyrophosphate enzyme, central domain KAB01_02832 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB01_02832 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB01_02833 PF01037 Lrp/AsnC ligand binding domain KAB01_02834 PF00171 Aldehyde dehydrogenase family KAB01_02835 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB01_02836 PF00202 Aminotransferase class-III KAB01_02838 PF17754 MftR C-terminal domain KAB01_02838 PF00440 Bacterial regulatory proteins, tetR family KAB01_02840 PF00487 Fatty acid desaturase KAB01_02841 PF00970 Oxidoreductase FAD-binding domain KAB01_02841 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB01_02841 PF00175 Oxidoreductase NAD-binding domain KAB01_02842 PF00440 Bacterial regulatory proteins, tetR family KAB01_02844 PF00176 SNF2 family N-terminal domain KAB01_02844 PF18339 RapA N-terminal Tudor like domain 1 KAB01_02844 PF18337 RapA N-terminal Tudor like domain KAB01_02844 PF00271 Helicase conserved C-terminal domain KAB01_02844 PF12137 RNA polymerase recycling family C-terminal KAB01_02845 PF00849 RNA pseudouridylate synthase KAB01_02847 PF00202 Aminotransferase class-III KAB01_02848 PF02581 Thiamine monophosphate synthase KAB01_02853 PF05193 Peptidase M16 inactive domain KAB01_02853 PF00675 Insulinase (Peptidase family M16) KAB01_02854 PF02567 Phenazine biosynthesis-like protein KAB01_02857 PF02567 Phenazine biosynthesis-like protein KAB01_02859 PF03466 LysR substrate binding domain KAB01_02859 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02860 PF06779 Uncharacterised MFS-type transporter YbfB KAB01_02863 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB01_02864 PF00849 RNA pseudouridylate synthase KAB01_02865 PF03971 Monomeric isocitrate dehydrogenase KAB01_02867 PF07943 Penicillin-binding protein 5, C-terminal domain KAB01_02867 PF00768 D-alanyl-D-alanine carboxypeptidase KAB01_02868 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_02869 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB01_02870 PF03441 FAD binding domain of DNA photolyase KAB01_02870 PF00875 DNA photolyase KAB01_02876 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB01_02879 PF03060 Nitronate monooxygenase KAB01_02880 PF01207 Dihydrouridine synthase (Dus) KAB01_02881 PF01207 Dihydrouridine synthase (Dus) KAB01_02882 PF07759 Protein of unknown function (DUF1615) KAB01_02884 PF00696 Amino acid kinase family KAB01_02884 PF01472 PUA domain KAB01_02885 PF01018 GTP1/OBG KAB01_02885 PF01926 50S ribosome-binding GTPase KAB01_02888 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB01_02888 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB01_02889 PF00892 EamA-like transporter family KAB01_02891 PF12344 Ultra-violet resistance protein B KAB01_02891 PF02151 UvrB/uvrC motif KAB01_02891 PF04851 Type III restriction enzyme, res subunit KAB01_02891 PF00271 Helicase conserved C-terminal domain KAB01_02891 PF17757 UvrB interaction domain KAB01_02893 PF17151 Periplasmic sensor domain KAB01_02893 PF00990 Diguanylate cyclase, GGDEF domain KAB01_02899 PF00106 short chain dehydrogenase KAB01_02900 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KAB01_02901 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KAB01_02902 PF11967 Recombination protein O N terminal KAB01_02902 PF02565 Recombination protein O C terminal KAB01_02904 PF01926 50S ribosome-binding GTPase KAB01_02904 PF07650 KH domain KAB01_02905 PF00035 Double-stranded RNA binding motif KAB01_02905 PF14622 Ribonuclease-III-like KAB01_02907 PF10502 Signal peptidase, peptidase S26 KAB01_02908 PF06421 GTP-binding protein LepA C-terminus KAB01_02908 PF03144 Elongation factor Tu domain 2 KAB01_02908 PF00009 Elongation factor Tu GTP binding domain KAB01_02908 PF00679 Elongation factor G C-terminus KAB01_02910 PF13180 PDZ domain KAB01_02911 PF00890 FAD binding domain KAB01_02911 PF02910 Fumarate reductase flavoprotein C-term KAB01_02913 PF02223 Thymidylate kinase KAB01_02914 PF02618 YceG-like family KAB01_02915 PF01063 Amino-transferase class IV KAB01_02918 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02919 PF00528 Binding-protein-dependent transport system inner membrane component KAB01_02920 PF12857 TOBE-like domain KAB01_02920 PF00005 ABC transporter KAB01_02921 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_02921 PF03466 LysR substrate binding domain KAB01_02923 PF14602 Hexapeptide repeat of succinyl-transferase KAB01_02923 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_02923 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KAB01_02925 PF06508 Queuosine biosynthesis protein QueC KAB01_02928 PF00578 AhpC/TSA family KAB01_02930 PF01467 Cytidylyltransferase-like KAB01_02930 PF00293 NUDIX domain KAB01_02931 PF00378 Enoyl-CoA hydratase/isomerase KAB01_02932 PF01784 NIF3 (NGG1p interacting factor 3) KAB01_02934 PF07690 Major Facilitator Superfamily KAB01_02935 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KAB01_02935 PF02769 AIR synthase related protein, C-terminal domain KAB01_02935 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAB01_02936 PF01966 HD domain KAB01_02937 PF07499 RuvA, C-terminal domain KAB01_02937 PF01330 RuvA N terminal domain KAB01_02938 PF17864 RuvB AAA lid domain KAB01_02938 PF05491 RuvB C-terminal winged helix domain KAB01_02938 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAB01_02939 PF01546 Peptidase family M20/M25/M40 KAB01_02939 PF07687 Peptidase dimerisation domain KAB01_02940 PF03061 Thioesterase superfamily KAB01_02941 PF01618 MotA/TolQ/ExbB proton channel family KAB01_02942 PF02472 Biopolymer transport protein ExbD/TolR KAB01_02944 PF07676 WD40-like Beta Propeller Repeat KAB01_02944 PF04052 TolB amino-terminal domain KAB01_02945 PF00691 OmpA family KAB01_02947 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KAB01_02948 PF00588 SpoU rRNA Methylase family KAB01_02948 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB01_02954 PF08299 Bacterial dnaA protein helix-turn-helix KAB01_02954 PF11638 DnaA N-terminal domain KAB01_02954 PF00308 Bacterial dnaA protein KAB01_02955 PF01594 AI-2E family transporter KAB01_02956 PF02769 AIR synthase related protein, C-terminal domain KAB01_02956 PF00586 AIR synthase related protein, N-terminal domain KAB01_02957 PF00551 Formyl transferase KAB01_02958 PF12697 Alpha/beta hydrolase family KAB01_02959 PF01343 Peptidase family S49 KAB01_02959 PF06965 Na+/H+ antiporter 1 KAB01_02961 PF00753 Metallo-beta-lactamase superfamily KAB01_02961 PF13567 Domain of unknown function (DUF4131) KAB01_02961 PF03772 Competence protein KAB01_02962 PF00005 ABC transporter KAB01_02963 PF12704 MacB-like periplasmic core domain KAB01_02963 PF02687 FtsX-like permease family KAB01_02965 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KAB01_02968 PF00266 Aminotransferase class-V KAB01_02970 PF13533 Biotin-lipoyl like KAB01_02975 PF00535 Glycosyl transferase family 2 KAB01_02979 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB01_02979 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB01_02980 PF01012 Electron transfer flavoprotein domain KAB01_02980 PF00766 Electron transfer flavoprotein FAD-binding domain KAB01_02981 PF01012 Electron transfer flavoprotein domain KAB01_02982 PF00589 Phage integrase family KAB01_02982 PF02899 Phage integrase, N-terminal SAM-like domain KAB01_02983 PF01810 LysE type translocator KAB01_02984 PF01678 Diaminopimelate epimerase KAB01_02985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAB01_02985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAB01_02987 PF00324 Amino acid permease KAB01_02988 PF18073 Rubredoxin metal binding domain KAB01_02990 PF00152 tRNA synthetases class II (D, K and N) KAB01_02991 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB01_02991 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB01_02991 PF11890 Domain of unknown function (DUF3410) KAB01_02992 PF06803 Protein of unknown function (DUF1232) KAB01_02993 PF02634 FdhD/NarQ family KAB01_02994 PF00384 Molybdopterin oxidoreductase KAB01_02995 PF02595 Glycerate kinase family KAB01_02998 PF00881 Nitroreductase family KAB01_03005 PF00975 Thioesterase domain KAB01_03005 PF00550 Phosphopantetheine attachment site KAB01_03005 PF13193 AMP-binding enzyme C-terminal domain KAB01_03005 PF00501 AMP-binding enzyme KAB01_03005 PF00668 Condensation domain KAB01_03008 PF03449 Transcription elongation factor, N-terminal KAB01_03008 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB01_03009 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB01_03009 PF01464 Transglycosylase SLT domain KAB01_03011 PF01171 PP-loop family KAB01_03012 PF01464 Transglycosylase SLT domain KAB01_03013 PF01435 Peptidase family M48 KAB01_03015 PF00873 AcrB/AcrD/AcrF family KAB01_03016 PF03009 Glycerophosphoryl diester phosphodiesterase family KAB01_03018 PF01219 Prokaryotic diacylglycerol kinase KAB01_03019 PF00118 TCP-1/cpn60 chaperonin family KAB01_03020 PF00166 Chaperonin 10 Kd subunit KAB01_03022 PF00149 Calcineurin-like phosphoesterase KAB01_03023 PF00781 Diacylglycerol kinase catalytic domain KAB01_03024 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KAB01_03024 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KAB01_03025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAB01_03025 PF01266 FAD dependent oxidoreductase KAB01_03026 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAB01_03026 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAB01_03027 PF00083 Sugar (and other) transporter KAB01_03030 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAB01_03030 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAB01_03033 PF16655 PhoD-like phosphatase, N-terminal domain KAB01_03033 PF09423 PhoD-like phosphatase KAB01_03037 PF00809 Pterin binding enzyme KAB01_03038 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_03038 PF01434 Peptidase family M41 KAB01_03038 PF06480 FtsH Extracellular KAB01_03038 PF17862 AAA+ lid domain KAB01_03039 PF01728 FtsJ-like methyltransferase KAB01_03040 PF01985 CRS1 / YhbY (CRM) domain KAB01_03043 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAB01_03043 PF00117 Glutamine amidotransferase class-I KAB01_03044 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB01_03044 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB01_03044 PF02142 MGS-like domain KAB01_03045 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB01_03045 PF03449 Transcription elongation factor, N-terminal KAB01_03046 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_03047 PF00582 Universal stress protein family KAB01_03048 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB01_03050 PF09587 Bacterial capsule synthesis protein PGA_cap KAB01_03054 PF00999 Sodium/hydrogen exchanger family KAB01_03055 PF04228 Putative neutral zinc metallopeptidase KAB01_03056 PF05661 Protein of unknown function (DUF808) KAB01_03057 PF00579 tRNA synthetases class I (W and Y) KAB01_03058 PF00549 CoA-ligase KAB01_03058 PF02629 CoA binding domain KAB01_03059 PF00549 CoA-ligase KAB01_03059 PF08442 ATP-grasp domain KAB01_03060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB01_03060 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_03061 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB01_03061 PF02817 e3 binding domain KAB01_03061 PF00364 Biotin-requiring enzyme KAB01_03062 PF16870 2-oxoglutarate dehydrogenase C-terminal KAB01_03062 PF02779 Transketolase, pyrimidine binding domain KAB01_03062 PF16078 2-oxoglutarate dehydrogenase N-terminus KAB01_03062 PF00676 Dehydrogenase E1 component KAB01_03063 PF13085 2Fe-2S iron-sulfur cluster binding domain KAB01_03064 PF00890 FAD binding domain KAB01_03064 PF02910 Fumarate reductase flavoprotein C-term KAB01_03065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB01_03066 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB01_03067 PF00285 Citrate synthase, C-terminal domain KAB01_03073 PF04542 Sigma-70 region 2 KAB01_03073 PF04545 Sigma-70, region 4 KAB01_03073 PF04546 Sigma-70, non-essential region KAB01_03073 PF00140 Sigma-70 factor, region 1.2 KAB01_03073 PF04539 Sigma-70 region 3 KAB01_03073 PF03979 Sigma-70 factor, region 1.1 KAB01_03074 PF04359 Protein of unknown function (DUF493) KAB01_03075 PF03099 Biotin/lipoate A/B protein ligase family KAB01_03077 PF00465 Iron-containing alcohol dehydrogenase KAB01_03078 PF13520 Amino acid permease KAB01_03079 PF03358 NADPH-dependent FMN reductase KAB01_03080 PF01638 HxlR-like helix-turn-helix KAB01_03081 PF00588 SpoU rRNA Methylase family KAB01_03082 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB01_03082 PF10414 Sirohaem synthase dimerisation region KAB01_03082 PF14824 Sirohaem biosynthesis protein central KAB01_03083 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB01_03083 PF02403 Seryl-tRNA synthetase N-terminal domain KAB01_03085 PF03548 Outer membrane lipoprotein carrier protein LolA KAB01_03086 PF01016 Ribosomal L27 protein KAB01_03087 PF00829 Ribosomal prokaryotic L21 protein KAB01_03088 PF00348 Polyprenyl synthetase KAB01_03091 PF01569 PAP2 superfamily KAB01_03092 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_03092 PF00529 HlyD membrane-fusion protein of T1SS KAB01_03093 PF00873 AcrB/AcrD/AcrF family KAB01_03094 PF02321 Outer membrane efflux protein KAB01_03095 PF01906 Putative heavy-metal-binding KAB01_03096 PF01906 Putative heavy-metal-binding KAB01_03100 PF10458 Valyl tRNA synthetase tRNA binding arm KAB01_03100 PF00133 tRNA synthetases class I (I, L, M and V) KAB01_03100 PF08264 Anticodon-binding domain of tRNA KAB01_03104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03104 PF03466 LysR substrate binding domain KAB01_03105 PF00909 Ammonium Transporter Family KAB01_03107 PF08521 Two-component sensor kinase N-terminal KAB01_03107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03107 PF00512 His Kinase A (phospho-acceptor) domain KAB01_03108 PF00072 Response regulator receiver domain KAB01_03108 PF00486 Transcriptional regulatory protein, C terminal KAB01_03109 PF00884 Sulfatase KAB01_03109 PF08019 Phosphoethanolamine transferase EptA/EptB KAB01_03113 PF01734 Patatin-like phospholipase KAB01_03115 PF01145 SPFH domain / Band 7 family KAB01_03116 PF04237 YjbR KAB01_03117 PF00348 Polyprenyl synthetase KAB01_03118 PF04303 PrpF protein KAB01_03119 PF00324 Amino acid permease KAB01_03121 PF01965 DJ-1/PfpI family KAB01_03122 PF00698 Acyl transferase domain KAB01_03122 PF14765 Polyketide synthase dehydratase KAB01_03122 PF00550 Phosphopantetheine attachment site KAB01_03122 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_03122 PF08990 Erythronolide synthase docking KAB01_03122 PF09277 Erythronolide synthase, docking KAB01_03122 PF16197 Ketoacyl-synthetase C-terminal extension KAB01_03122 PF08659 KR domain KAB01_03122 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB01_03122 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB01_03123 PF06719 AraC-type transcriptional regulator N-terminus KAB01_03123 PF12833 Helix-turn-helix domain KAB01_03124 PF02673 Bacitracin resistance protein BacA KAB01_03128 PF02525 Flavodoxin-like fold KAB01_03131 PF01507 Phosphoadenosine phosphosulfate reductase family KAB01_03132 PF06974 Protein of unknown function (DUF1298) KAB01_03132 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KAB01_03134 PF10150 Ribonuclease E/G family KAB01_03134 PF00575 S1 RNA binding domain KAB01_03135 PF02545 Maf-like protein KAB01_03136 PF04093 rod shape-determining protein MreD KAB01_03137 PF04085 rod shape-determining protein MreC KAB01_03139 PF02686 Glu-tRNAGln amidotransferase C subunit KAB01_03140 PF01425 Amidase KAB01_03141 PF02637 GatB domain KAB01_03141 PF02934 GatB/GatE catalytic domain KAB01_03150 PF05992 SbmA/BacA-like family KAB01_03151 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_03151 PF13291 ACT domain KAB01_03152 PF01734 Patatin-like phospholipase KAB01_03153 PF01235 Sodium:alanine symporter family KAB01_03155 PF00881 Nitroreductase family KAB01_03156 PF07690 Major Facilitator Superfamily KAB01_03157 PF12805 FUSC-like inner membrane protein yccS KAB01_03159 PF00258 Flavodoxin KAB01_03159 PF00667 FAD binding domain KAB01_03159 PF00175 Oxidoreductase NAD-binding domain KAB01_03167 PF17969 L,D-transpeptidase C-terminal domain KAB01_03167 PF03734 L,D-transpeptidase catalytic domain KAB01_03168 PF04304 Protein of unknown function (DUF454) KAB01_03170 PF08085 Entericidin EcnA/B family KAB01_03171 PF01546 Peptidase family M20/M25/M40 KAB01_03171 PF07687 Peptidase dimerisation domain KAB01_03173 PF01584 CheW-like domain KAB01_03173 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03173 PF01627 Hpt domain KAB01_03173 PF00072 Response regulator receiver domain KAB01_03174 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAB01_03174 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KAB01_03175 PF01584 CheW-like domain KAB01_03176 PF00072 Response regulator receiver domain KAB01_03177 PF00072 Response regulator receiver domain KAB01_03180 PF00873 AcrB/AcrD/AcrF family KAB01_03181 PF04073 Aminoacyl-tRNA editing domain KAB01_03181 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB01_03181 PF03129 Anticodon binding domain KAB01_03182 PF07411 Domain of unknown function (DUF1508) KAB01_03183 PF08274 PhnA Zinc-Ribbon KAB01_03183 PF03831 PhnA domain KAB01_03186 PF04343 Protein of unknown function, DUF488 KAB01_03188 PF01571 Aminomethyltransferase folate-binding domain KAB01_03189 PF13098 Thioredoxin-like domain KAB01_03189 PF10411 Disulfide bond isomerase protein N-terminus KAB01_03191 PF03547 Membrane transport protein KAB01_03192 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB01_03193 PF00593 TonB dependent receptor KAB01_03193 PF07715 TonB-dependent Receptor Plug Domain KAB01_03196 PF00593 TonB dependent receptor KAB01_03196 PF07715 TonB-dependent Receptor Plug Domain KAB01_03197 PF02245 Methylpurine-DNA glycosylase (MPG) KAB01_03198 PF06827 Zinc finger found in FPG and IleRS KAB01_03198 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KAB01_03198 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB01_03201 PF01741 Large-conductance mechanosensitive channel, MscL KAB01_03203 PF00860 Permease family KAB01_03204 PF08468 Methyltransferase small domain N-terminal KAB01_03204 PF05175 Methyltransferase small domain KAB01_03205 PF00324 Amino acid permease KAB01_03206 PF01139 tRNA-splicing ligase RtcB KAB01_03208 PF00691 OmpA family KAB01_03208 PF13505 Outer membrane protein beta-barrel domain KAB01_03210 PF02803 Thiolase, C-terminal domain KAB01_03210 PF00108 Thiolase, N-terminal domain KAB01_03212 PF00893 Small Multidrug Resistance protein KAB01_03214 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB01_03214 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB01_03215 PF01011 PQQ enzyme repeat KAB01_03216 PF04966 Carbohydrate-selective porin, OprB family KAB01_03217 PF02515 CoA-transferase family III KAB01_03218 PF12833 Helix-turn-helix domain KAB01_03218 PF02311 AraC-like ligand binding domain KAB01_03219 PF02803 Thiolase, C-terminal domain KAB01_03219 PF00108 Thiolase, N-terminal domain KAB01_03220 PF00378 Enoyl-CoA hydratase/isomerase KAB01_03220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB01_03220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB01_03226 PF03006 Haemolysin-III related KAB01_03227 PF07690 Major Facilitator Superfamily KAB01_03227 PF00083 Sugar (and other) transporter KAB01_03229 PF02810 SEC-C motif KAB01_03229 PF01043 SecA preprotein cross-linking domain KAB01_03229 PF07516 SecA Wing and Scaffold domain KAB01_03229 PF07517 SecA DEAD-like domain KAB01_03230 PF00578 AhpC/TSA family KAB01_03230 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB01_03231 PF00753 Metallo-beta-lactamase superfamily KAB01_03234 PF02875 Mur ligase family, glutamate ligase domain KAB01_03234 PF08245 Mur ligase middle domain KAB01_03235 PF01039 Carboxyl transferase domain KAB01_03236 PF00290 Tryptophan synthase alpha chain KAB01_03241 PF00291 Pyridoxal-phosphate dependent enzyme KAB01_03242 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAB01_03243 PF00593 TonB dependent receptor KAB01_03243 PF07715 TonB-dependent Receptor Plug Domain KAB01_03244 PF01923 Cobalamin adenosyltransferase KAB01_03248 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KAB01_03249 PF00486 Transcriptional regulatory protein, C terminal KAB01_03249 PF00072 Response regulator receiver domain KAB01_03250 PF00672 HAMP domain KAB01_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03250 PF00512 His Kinase A (phospho-acceptor) domain KAB01_03252 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_03252 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB01_03252 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_03252 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_03253 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_03253 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_03253 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_03253 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB01_03254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03254 PF03466 LysR substrate binding domain KAB01_03255 PF00043 Glutathione S-transferase, C-terminal domain KAB01_03255 PF02798 Glutathione S-transferase, N-terminal domain KAB01_03256 PF06146 Phosphate-starvation-inducible E KAB01_03260 PF00593 TonB dependent receptor KAB01_03260 PF07715 TonB-dependent Receptor Plug Domain KAB01_03263 PF01336 OB-fold nucleic acid binding domain KAB01_03263 PF00152 tRNA synthetases class II (D, K and N) KAB01_03263 PF02938 GAD domain KAB01_03264 PF17101 Stealth protein CR1, conserved region 1 KAB01_03264 PF11380 Stealth protein CR2, conserved region 2 KAB01_03264 PF17102 Stealth protein CR3, conserved region 3 KAB01_03269 PF13439 Glycosyltransferase Family 4 KAB01_03269 PF00534 Glycosyl transferases group 1 KAB01_03270 PF00535 Glycosyl transferase family 2 KAB01_03271 PF00535 Glycosyl transferase family 2 KAB01_03272 PF01522 Polysaccharide deacetylase KAB01_03275 PF01063 Amino-transferase class IV KAB01_03276 PF08335 GlnD PII-uridylyltransferase KAB01_03276 PF03710 Glutamate-ammonia ligase adenylyltransferase KAB01_03277 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03277 PF00672 HAMP domain KAB01_03277 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAB01_03277 PF00072 Response regulator receiver domain KAB01_03277 PF01627 Hpt domain KAB01_03277 PF00512 His Kinase A (phospho-acceptor) domain KAB01_03279 PF02547 Queuosine biosynthesis protein KAB01_03282 PF01702 Queuine tRNA-ribosyltransferase KAB01_03283 PF02699 Preprotein translocase subunit KAB01_03284 PF13721 SecD export protein N-terminal TM region KAB01_03284 PF02355 Protein export membrane protein KAB01_03284 PF07549 SecD/SecF GG Motif KAB01_03285 PF02355 Protein export membrane protein KAB01_03285 PF07549 SecD/SecF GG Motif KAB01_03286 PF04127 DNA / pantothenate metabolism flavoprotein KAB01_03286 PF02441 Flavoprotein KAB01_03287 PF04002 RadC-like JAB domain KAB01_03288 PF01062 Bestrophin, RFP-TM, chloride channel KAB01_03289 PF02811 PHP domain KAB01_03290 PF04279 Intracellular septation protein A KAB01_03291 PF03795 YCII-related domain KAB01_03293 PF01266 FAD dependent oxidoreductase KAB01_03293 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB01_03295 PF04461 Protein of unknown function (DUF520) KAB01_03297 PF03061 Thioesterase superfamily KAB01_03298 PF00085 Thioredoxin KAB01_03299 PF00561 alpha/beta hydrolase fold KAB01_03300 PF04273 Putative phosphatase (DUF442) KAB01_03300 PF00753 Metallo-beta-lactamase superfamily KAB01_03302 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_03302 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB01_03309 PF17152 Periplasmic sensor domain KAB01_03309 PF00990 Diguanylate cyclase, GGDEF domain KAB01_03310 PF00691 OmpA family KAB01_03310 PF01389 OmpA-like transmembrane domain KAB01_03311 PF10518 TAT (twin-arginine translocation) pathway signal sequence KAB01_03311 PF00149 Calcineurin-like phosphoesterase KAB01_03312 PF13091 PLD-like domain KAB01_03314 PF16360 GTP-binding GTPase Middle Region KAB01_03314 PF13167 GTP-binding GTPase N-terminal KAB01_03314 PF01926 50S ribosome-binding GTPase KAB01_03318 PF00149 Calcineurin-like phosphoesterase KAB01_03319 PF00398 Ribosomal RNA adenine dimethylase KAB01_03320 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KAB01_03321 PF00572 Ribosomal protein L13 KAB01_03322 PF00380 Ribosomal protein S9/S16 KAB01_03323 PF00043 Glutathione S-transferase, C-terminal domain KAB01_03323 PF13417 Glutathione S-transferase, N-terminal domain KAB01_03324 PF04386 Stringent starvation protein B KAB01_03326 PF00289 Biotin carboxylase, N-terminal domain KAB01_03326 PF02785 Biotin carboxylase C-terminal domain KAB01_03326 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB01_03326 PF00364 Biotin-requiring enzyme KAB01_03328 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_03328 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_03328 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_03329 PF01039 Carboxyl transferase domain KAB01_03333 PF00440 Bacterial regulatory proteins, tetR family KAB01_03333 PF17932 Tetracyclin repressor-like, C-terminal domain KAB01_03334 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_03334 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_03334 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_03336 PF13737 Transposase DDE domain KAB01_03345 PF01066 CDP-alcohol phosphatidyltransferase KAB01_03346 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KAB01_03350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KAB01_03350 PF00056 lactate/malate dehydrogenase, NAD binding domain KAB01_03352 PF01551 Peptidase family M23 KAB01_03352 PF10145 Phage-related minor tail protein KAB01_03352 PF01464 Transglycosylase SLT domain KAB01_03353 PF04055 Radical SAM superfamily KAB01_03353 PF01938 TRAM domain KAB01_03353 PF00919 Uncharacterized protein family UPF0004 KAB01_03354 PF02562 PhoH-like protein KAB01_03355 PF02130 Uncharacterized protein family UPF0054 KAB01_03360 PF03358 NADPH-dependent FMN reductase KAB01_03361 PF03631 Virulence factor BrkB KAB01_03362 PF00892 EamA-like transporter family KAB01_03363 PF12833 Helix-turn-helix domain KAB01_03364 PF01557 Fumarylacetoacetate (FAA) hydrolase family KAB01_03373 PF17876 Cold shock domain KAB01_03373 PF08461 Ribonuclease R winged-helix domain KAB01_03373 PF00773 RNB domain KAB01_03373 PF00575 S1 RNA binding domain KAB01_03373 PF08206 Ribonuclease B OB domain KAB01_03374 PF01432 Peptidase family M3 KAB01_03375 PF09526 Probable metal-binding protein (DUF2387) KAB01_03382 PF03937 Flavinator of succinate dehydrogenase KAB01_03383 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_03383 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_03383 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_03384 PF00743 Flavin-binding monooxygenase-like KAB01_03385 PF01196 Ribosomal protein L17 KAB01_03386 PF01000 RNA polymerase Rpb3/RpoA insert domain KAB01_03386 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAB01_03386 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAB01_03387 PF00163 Ribosomal protein S4/S9 N-terminal domain KAB01_03387 PF01479 S4 domain KAB01_03388 PF00411 Ribosomal protein S11 KAB01_03389 PF00416 Ribosomal protein S13/S18 KAB01_03390 PF00444 Ribosomal protein L36 KAB01_03391 PF00344 SecY translocase KAB01_03392 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAB01_03393 PF00327 Ribosomal protein L30p/L7e KAB01_03394 PF03719 Ribosomal protein S5, C-terminal domain KAB01_03394 PF00333 Ribosomal protein S5, N-terminal domain KAB01_03395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAB01_03396 PF00347 Ribosomal protein L6 KAB01_03397 PF00410 Ribosomal protein S8 KAB01_03398 PF00253 Ribosomal protein S14p/S29e KAB01_03399 PF00281 Ribosomal protein L5 KAB01_03399 PF00673 ribosomal L5P family C-terminus KAB01_03400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAB01_03400 PF00467 KOW motif KAB01_03401 PF00238 Ribosomal protein L14p/L23e KAB01_03402 PF00366 Ribosomal protein S17 KAB01_03403 PF00831 Ribosomal L29 protein KAB01_03404 PF00252 Ribosomal protein L16p/L10e KAB01_03405 PF00189 Ribosomal protein S3, C-terminal domain KAB01_03405 PF07650 KH domain KAB01_03406 PF00237 Ribosomal protein L22p/L17e KAB01_03407 PF00203 Ribosomal protein S19 KAB01_03408 PF00181 Ribosomal Proteins L2, RNA binding domain KAB01_03408 PF03947 Ribosomal Proteins L2, C-terminal domain KAB01_03409 PF00276 Ribosomal protein L23 KAB01_03410 PF00573 Ribosomal protein L4/L1 family KAB01_03411 PF00297 Ribosomal protein L3 KAB01_03412 PF00338 Ribosomal protein S10p/S20e KAB01_03413 PF00117 Glutamine amidotransferase class-I KAB01_03414 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB01_03415 PF05872 Bacterial protein of unknown function (DUF853) KAB01_03416 PF00175 Oxidoreductase NAD-binding domain KAB01_03416 PF00042 Globin KAB01_03416 PF00970 Oxidoreductase FAD-binding domain KAB01_03417 PF02082 Transcriptional regulator KAB01_03418 PF01926 50S ribosome-binding GTPase KAB01_03420 PF00375 Sodium:dicarboxylate symporter family KAB01_03422 PF01553 Acyltransferase KAB01_03425 PF00270 DEAD/DEAH box helicase KAB01_03425 PF00271 Helicase conserved C-terminal domain KAB01_03425 PF17191 RecG wedge domain KAB01_03426 PF00156 Phosphoribosyl transferase domain KAB01_03427 PF00293 NUDIX domain KAB01_03428 PF03641 Possible lysine decarboxylase KAB01_03429 PF01544 CorA-like Mg2+ transporter protein KAB01_03431 PF05494 MlaC protein KAB01_03433 PF02405 Permease MlaE KAB01_03434 PF00005 ABC transporter KAB01_03435 PF03880 DbpA RNA binding domain KAB01_03435 PF00271 Helicase conserved C-terminal domain KAB01_03435 PF12343 Cold shock protein DEAD box A KAB01_03435 PF00270 DEAD/DEAH box helicase KAB01_03436 PF00459 Inositol monophosphatase family KAB01_03437 PF02780 Transketolase, C-terminal domain KAB01_03437 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAB01_03437 PF02779 Transketolase, pyrimidine binding domain KAB01_03438 PF00925 GTP cyclohydrolase II KAB01_03439 PF01218 Coproporphyrinogen III oxidase KAB01_03440 PF01488 Shikimate / quinate 5-dehydrogenase KAB01_03440 PF08501 Shikimate dehydrogenase substrate binding domain KAB01_03440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAB01_03442 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB01_03442 PF02770 Acyl-CoA dehydrogenase, middle domain KAB01_03442 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB01_03442 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB01_03444 PF04024 PspC domain KAB01_03445 PF00571 CBS domain KAB01_03450 PF02091 Glycyl-tRNA synthetase alpha subunit KAB01_03451 PF05746 DALR anticodon binding domain KAB01_03451 PF02092 Glycyl-tRNA synthetase beta subunit KAB01_03453 PF00892 EamA-like transporter family KAB01_03454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03454 PF03466 LysR substrate binding domain KAB01_03460 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KAB01_03461 PF04996 Succinylarginine dihydrolase KAB01_03462 PF00171 Aldehyde dehydrogenase family KAB01_03463 PF04958 Arginine N-succinyltransferase beta subunit KAB01_03464 PF00202 Aminotransferase class-III KAB01_03465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB01_03465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB01_03466 PF00324 Amino acid permease KAB01_03473 PF01594 AI-2E family transporter KAB01_03474 PF00080 Copper/zinc superoxide dismutase (SODC) KAB01_03475 PF12805 FUSC-like inner membrane protein yccS KAB01_03476 PF07690 Major Facilitator Superfamily KAB01_03478 PF02525 Flavodoxin-like fold KAB01_03479 PF03992 Antibiotic biosynthesis monooxygenase KAB01_03481 PF01565 FAD binding domain KAB01_03481 PF02913 FAD linked oxidases, C-terminal domain KAB01_03482 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB01_03482 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB01_03483 PF00892 EamA-like transporter family KAB01_03484 PF00892 EamA-like transporter family KAB01_03486 PF01925 Sulfite exporter TauE/SafE KAB01_03487 PF09157 Pseudouridine synthase II TruB, C-terminal KAB01_03487 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAB01_03487 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAB01_03488 PF03280 Proteobacterial lipase chaperone protein KAB01_03489 PF00561 alpha/beta hydrolase fold KAB01_03490 PF01245 Ribosomal protein L19 KAB01_03491 PF01746 tRNA (Guanine-1)-methyltransferase KAB01_03492 PF05239 PRC-barrel domain KAB01_03492 PF01782 RimM N-terminal domain KAB01_03493 PF00886 Ribosomal protein S16 KAB01_03501 PF02401 LytB protein KAB01_03502 PF00625 Guanylate kinase KAB01_03503 PF01192 RNA polymerase Rpb6 KAB01_03504 PF13291 ACT domain KAB01_03504 PF04607 Region found in RelA / SpoT proteins KAB01_03504 PF02824 TGS domain KAB01_03505 PF01042 Endoribonuclease L-PSP KAB01_03506 PF04324 BFD-like [2Fe-2S] binding domain KAB01_03507 PF00210 Ferritin-like domain KAB01_03508 PF04932 O-Antigen ligase KAB01_03508 PF15864 Protein glycosylation ligase KAB01_03508 PF11846 Virulence factor membrane-bound polymerase, C-terminal KAB01_03510 PF07963 Prokaryotic N-terminal methylation motif KAB01_03510 PF00114 Pilin (bacterial filament) KAB01_03512 PF04536 TPM domain KAB01_03513 PF04011 LemA family KAB01_03515 PF13737 Transposase DDE domain KAB01_03517 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB01_03517 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAB01_03518 PF04898 Glutamate synthase central domain KAB01_03518 PF01493 GXGXG motif KAB01_03518 PF00310 Glutamine amidotransferases class-II KAB01_03518 PF01645 Conserved region in glutamate synthase KAB01_03520 PF01761 3-dehydroquinate synthase KAB01_03521 PF01202 Shikimate kinase KAB01_03522 PF11741 AMIN domain KAB01_03522 PF00263 Bacterial type II and III secretion system protein KAB01_03522 PF07660 Secretin and TonB N terminus short domain KAB01_03522 PF03958 Bacterial type II/III secretion system short domain KAB01_03527 PF00905 Penicillin binding protein transpeptidase domain KAB01_03527 PF17092 Penicillin-binding protein OB-like domain KAB01_03527 PF00912 Transglycosylase KAB01_03528 PF13847 Methyltransferase domain KAB01_03530 PF00953 Glycosyl transferase family 4 KAB01_03531 PF02875 Mur ligase family, glutamate ligase domain KAB01_03531 PF08245 Mur ligase middle domain KAB01_03531 PF01225 Mur ligase family, catalytic domain KAB01_03532 PF08245 Mur ligase middle domain KAB01_03532 PF01225 Mur ligase family, catalytic domain KAB01_03532 PF02875 Mur ligase family, glutamate ligase domain KAB01_03533 PF00905 Penicillin binding protein transpeptidase domain KAB01_03533 PF03717 Penicillin-binding Protein dimerisation domain KAB01_03535 PF01795 MraW methylase family KAB01_03538 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB01_03541 PF00324 Amino acid permease KAB01_03547 PF01545 Cation efflux family KAB01_03548 PF00873 AcrB/AcrD/AcrF family KAB01_03549 PF00529 HlyD membrane-fusion protein of T1SS KAB01_03549 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_03552 PF04191 Phospholipid methyltransferase KAB01_03557 PF12848 ABC transporter KAB01_03557 PF00005 ABC transporter KAB01_03558 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB01_03559 PF00106 short chain dehydrogenase KAB01_03560 PF00916 Sulfate permease family KAB01_03560 PF01740 STAS domain KAB01_03561 PF09371 Tex-like protein N-terminal domain KAB01_03561 PF00575 S1 RNA binding domain KAB01_03561 PF17674 HHH domain KAB01_03561 PF16921 Tex protein YqgF-like domain KAB01_03562 PF00072 Response regulator receiver domain KAB01_03562 PF00486 Transcriptional regulatory protein, C terminal KAB01_03563 PF00672 HAMP domain KAB01_03563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03563 PF00512 His Kinase A (phospho-acceptor) domain KAB01_03564 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KAB01_03564 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KAB01_03565 PF00583 Acetyltransferase (GNAT) family KAB01_03569 PF00475 Imidazoleglycerol-phosphate dehydratase KAB01_03570 PF00117 Glutamine amidotransferase class-I KAB01_03573 PF00977 Histidine biosynthesis protein KAB01_03578 PF01636 Phosphotransferase enzyme family KAB01_03579 PF00977 Histidine biosynthesis protein KAB01_03582 PF00230 Major intrinsic protein KAB01_03587 PF02705 K+ potassium transporter KAB01_03589 PF12833 Helix-turn-helix domain KAB01_03593 PF02525 Flavodoxin-like fold KAB01_03594 PF01638 HxlR-like helix-turn-helix KAB01_03597 PF13737 Transposase DDE domain KAB01_03598 PF01638 HxlR-like helix-turn-helix KAB01_03601 PF12833 Helix-turn-helix domain KAB01_03601 PF02311 AraC-like ligand binding domain KAB01_03602 PF00248 Aldo/keto reductase family KAB01_03609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03609 PF03466 LysR substrate binding domain KAB01_03610 PF07690 Major Facilitator Superfamily KAB01_03615 PF01593 Flavin containing amine oxidoreductase KAB01_03616 PF02678 Pirin KAB01_03616 PF05726 Pirin C-terminal cupin domain KAB01_03617 PF00857 Isochorismatase family KAB01_03618 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03619 PF00171 Aldehyde dehydrogenase family KAB01_03620 PF00202 Aminotransferase class-III KAB01_03621 PF13737 Transposase DDE domain KAB01_03622 PF00202 Aminotransferase class-III KAB01_03623 PF00392 Bacterial regulatory proteins, gntR family KAB01_03623 PF00155 Aminotransferase class I and II KAB01_03624 PF00324 Amino acid permease KAB01_03626 PF03591 AzlC protein KAB01_03628 PF00436 Single-strand binding protein family KAB01_03629 PF07690 Major Facilitator Superfamily KAB01_03631 PF08543 Phosphomethylpyrimidine kinase KAB01_03631 PF03070 TENA/THI-4/PQQC family KAB01_03631 PF02581 Thiamine monophosphate synthase KAB01_03632 PF06942 GlpM protein KAB01_03634 PF00107 Zinc-binding dehydrogenase KAB01_03634 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_03635 PF00440 Bacterial regulatory proteins, tetR family KAB01_03635 PF16925 Tetracyclin repressor-like, C-terminal domain KAB01_03636 PF17760 UvrA interaction domain KAB01_03636 PF17755 UvrA DNA-binding domain KAB01_03636 PF00005 ABC transporter KAB01_03637 PF17158 Membrane-associated sensor, integral membrane domain KAB01_03637 PF00990 Diguanylate cyclase, GGDEF domain KAB01_03639 PF02028 BCCT, betaine/carnitine/choline family transporter KAB01_03641 PF00474 Sodium:solute symporter family KAB01_03642 PF04341 Protein of unknown function, DUF485 KAB01_03643 PF00072 Response regulator receiver domain KAB01_03643 PF01627 Hpt domain KAB01_03643 PF00672 HAMP domain KAB01_03643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03643 PF00512 His Kinase A (phospho-acceptor) domain KAB01_03645 PF00196 Bacterial regulatory proteins, luxR family KAB01_03645 PF00072 Response regulator receiver domain KAB01_03646 PF03358 NADPH-dependent FMN reductase KAB01_03647 PF00296 Luciferase-like monooxygenase KAB01_03648 PF01037 Lrp/AsnC ligand binding domain KAB01_03649 PF00857 Isochorismatase family KAB01_03650 PF16177 Acetyl-coenzyme A synthetase N-terminus KAB01_03650 PF13193 AMP-binding enzyme C-terminal domain KAB01_03650 PF00501 AMP-binding enzyme KAB01_03652 PF00924 Mechanosensitive ion channel KAB01_03653 PF04452 RNA methyltransferase KAB01_03654 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAB01_03655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB01_03658 PF03462 PCRF domain KAB01_03658 PF00472 RF-1 domain KAB01_03660 PF17768 RecJ OB domain KAB01_03660 PF02272 DHHA1 domain KAB01_03660 PF01368 DHH family KAB01_03661 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KAB01_03661 PF01243 Pyridoxamine 5'-phosphate oxidase KAB01_03662 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB01_03662 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB01_03662 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB01_03662 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB01_03663 PF00571 CBS domain KAB01_03663 PF00478 IMP dehydrogenase / GMP reductase domain KAB01_03664 PF03692 Putative zinc- or iron-chelating domain KAB01_03665 PF01613 Flavin reductase like domain KAB01_03665 PF00258 Flavodoxin KAB01_03666 PF07715 TonB-dependent Receptor Plug Domain KAB01_03666 PF00593 TonB dependent receptor KAB01_03669 PF01169 Uncharacterized protein family UPF0016 KAB01_03671 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB01_03671 PF00364 Biotin-requiring enzyme KAB01_03671 PF02817 e3 binding domain KAB01_03672 PF00456 Transketolase, thiamine diphosphate binding domain KAB01_03672 PF17831 Pyruvate dehydrogenase E1 component middle domain KAB01_03673 PF01551 Peptidase family M23 KAB01_03675 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAB01_03676 PF00091 Tubulin/FtsZ family, GTPase domain KAB01_03676 PF12327 FtsZ family, C-terminal domain KAB01_03677 PF02491 SHS2 domain inserted in FTSA KAB01_03678 PF03799 Cell division protein FtsQ KAB01_03678 PF08478 POTRA domain, FtsQ-type KAB01_03679 PF07478 D-ala D-ala ligase C-terminus KAB01_03679 PF01820 D-ala D-ala ligase N-terminus KAB01_03680 PF02875 Mur ligase family, glutamate ligase domain KAB01_03680 PF01225 Mur ligase family, catalytic domain KAB01_03680 PF08245 Mur ligase middle domain KAB01_03681 PF04101 Glycosyltransferase family 28 C-terminal domain KAB01_03681 PF03033 Glycosyltransferase family 28 N-terminal domain KAB01_03682 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KAB01_03682 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KAB01_03684 PF00593 TonB dependent receptor KAB01_03684 PF07715 TonB-dependent Receptor Plug Domain KAB01_03685 PF00156 Phosphoribosyl transferase domain KAB01_03686 PF03372 Endonuclease/Exonuclease/phosphatase family KAB01_03687 PF03960 ArsC family KAB01_03689 PF07859 alpha/beta hydrolase fold KAB01_03691 PF07694 5TMR of 5TMR-LYT KAB01_03691 PF00990 Diguanylate cyclase, GGDEF domain KAB01_03692 PF11412 Disulphide bond corrector protein DsbC KAB01_03692 PF02683 Cytochrome C biogenesis protein transmembrane region KAB01_03698 PF00576 HIUase/Transthyretin family KAB01_03699 PF00860 Permease family KAB01_03701 PF01494 FAD binding domain KAB01_03702 PF03561 Allantoicase repeat KAB01_03703 PF04115 Ureidoglycolate lyase KAB01_03704 PF01751 Toprim domain KAB01_03704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03704 PF00986 DNA gyrase B subunit, carboxyl terminus KAB01_03704 PF00204 DNA gyrase B KAB01_03705 PF05728 Uncharacterised protein family (UPF0227) KAB01_03710 PF00182 Chitinase class I KAB01_03711 PF01510 N-acetylmuramoyl-L-alanine amidase KAB01_03711 PF01471 Putative peptidoglycan binding domain KAB01_03711 PF01476 LysM domain KAB01_03713 PF13737 Transposase DDE domain KAB01_03714 PF04717 Type VI secretion system, phage-baseplate injector KAB01_03715 PF02600 Disulfide bond formation protein DsbB KAB01_03716 PF04262 Glutamate-cysteine ligase KAB01_03719 PF04286 Protein of unknown function (DUF445) KAB01_03720 PF00155 Aminotransferase class I and II KAB01_03721 PF01554 MatE KAB01_03722 PF00106 short chain dehydrogenase KAB01_03724 PF00072 Response regulator receiver domain KAB01_03724 PF00486 Transcriptional regulatory protein, C terminal KAB01_03725 PF00989 PAS fold KAB01_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB01_03725 PF11808 Phosphate regulon sensor protein PhoR KAB01_03725 PF00512 His Kinase A (phospho-acceptor) domain KAB01_03728 PF03069 Acetamidase/Formamidase family KAB01_03729 PF02666 Phosphatidylserine decarboxylase KAB01_03730 PF00581 Rhodanese-like domain KAB01_03731 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB01_03731 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAB01_03733 PF06628 Catalase-related immune-responsive KAB01_03733 PF00199 Catalase KAB01_03734 PF02580 D-Tyr-tRNA(Tyr) deacylase KAB01_03735 PF02580 D-Tyr-tRNA(Tyr) deacylase KAB01_03740 PF00925 GTP cyclohydrolase II KAB01_03740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB01_03741 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAB01_03742 PF01029 NusB family KAB01_03743 PF02769 AIR synthase related protein, C-terminal domain KAB01_03743 PF00586 AIR synthase related protein, N-terminal domain KAB01_03744 PF04608 Phosphatidylglycerophosphatase A KAB01_03745 PF14602 Hexapeptide repeat of succinyl-transferase KAB01_03745 PF00132 Bacterial transferase hexapeptide (six repeats) KAB01_03745 PF12804 MobA-like NTP transferase domain KAB01_03746 PF01380 SIS domain KAB01_03747 PF01177 Asp/Glu/Hydantoin racemase KAB01_03748 PF13419 Haloacid dehalogenase-like hydrolase KAB01_03750 PF00491 Arginase family KAB01_03751 PF01979 Amidohydrolase family KAB01_03752 PF00324 Amino acid permease KAB01_03753 PF00221 Aromatic amino acid lyase KAB01_03754 PF17391 Urocanase N-terminal domain KAB01_03754 PF17392 Urocanase C-terminal domain KAB01_03754 PF01175 Urocanase Rossmann-like domain KAB01_03755 PF05962 HutD KAB01_03756 PF07702 UTRA domain KAB01_03756 PF00392 Bacterial regulatory proteins, gntR family KAB01_03758 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB01_03758 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB01_03760 PF00324 Amino acid permease KAB01_03762 PF14497 Glutathione S-transferase, C-terminal domain KAB01_03762 PF02798 Glutathione S-transferase, N-terminal domain KAB01_03763 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB01_03765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB01_03766 PF04463 Protein of unknown function (DUF523) KAB01_03767 PF01554 MatE KAB01_03768 PF01758 Sodium Bile acid symporter family KAB01_03769 PF00857 Isochorismatase family KAB01_03770 PF00701 Dihydrodipicolinate synthetase family KAB01_03772 PF01259 SAICAR synthetase KAB01_03774 PF01226 Formate/nitrite transporter KAB01_03775 PF12002 MgsA AAA+ ATPase C terminal KAB01_03775 PF00004 ATPase family associated with various cellular activities (AAA) KAB01_03775 PF16193 AAA C-terminal domain KAB01_03776 PF07995 Glucose / Sorbosone dehydrogenase KAB01_03777 PF03692 Putative zinc- or iron-chelating domain KAB01_03780 PF07043 Protein of unknown function (DUF1328) KAB01_03783 PF10576 Iron-sulfur binding domain of endonuclease III KAB01_03783 PF14815 NUDIX domain KAB01_03783 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB01_03783 PF00633 Helix-hairpin-helix motif KAB01_03786 PF03352 Methyladenine glycosylase KAB01_03787 PF00107 Zinc-binding dehydrogenase KAB01_03787 PF08240 Alcohol dehydrogenase GroES-like domain KAB01_03788 PF00392 Bacterial regulatory proteins, gntR family KAB01_03788 PF00155 Aminotransferase class I and II KAB01_03790 PF03466 LysR substrate binding domain KAB01_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03791 PF00248 Aldo/keto reductase family KAB01_03792 PF00248 Aldo/keto reductase family KAB01_03793 PF07690 Major Facilitator Superfamily KAB01_03795 PF01113 Dihydrodipicolinate reductase, N-terminus KAB01_03795 PF05173 Dihydrodipicolinate reductase, C-terminus KAB01_03797 PF00684 DnaJ central domain KAB01_03797 PF00226 DnaJ domain KAB01_03797 PF01556 DnaJ C terminal domain KAB01_03799 PF00873 AcrB/AcrD/AcrF family KAB01_03800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB01_03801 PF00440 Bacterial regulatory proteins, tetR family KAB01_03801 PF08361 MAATS-type transcriptional repressor, C-terminal region KAB01_03802 PF00311 Phosphoenolpyruvate carboxylase KAB01_03803 PF00860 Permease family KAB01_03804 PF03466 LysR substrate binding domain KAB01_03804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB01_03807 PF00920 Dehydratase family KAB01_03808 PF00551 Formyl transferase KAB01_03808 PF02911 Formyl transferase, C-terminal domain KAB01_03809 PF01189 16S rRNA methyltransferase RsmB/F KAB01_03809 PF01029 NusB family KAB01_03811 PF00209 Sodium:neurotransmitter symporter family KAB01_03819 PF00579 tRNA synthetases class I (W and Y) KAB01_03820 PF03702 Anhydro-N-acetylmuramic acid kinase KAB01_03821 PF00561 alpha/beta hydrolase fold KAB01_03822 PF01521 Iron-sulphur cluster biosynthesis KAB01_03830 PF06834 TraU protein KAB01_03832 PF06986 Type-1V conjugative transfer system mating pair stabilisation KAB01_03835 PF06122 Conjugative relaxosome accessory transposon protein KAB01_03839 PF00817 impB/mucB/samB family KAB01_03839 PF11799 impB/mucB/samB family C-terminal domain KAB01_03839 PF13438 Domain of unknown function (DUF4113) KAB01_03857 PF00565 Staphylococcal nuclease homologue KAB01_03858 PF00816 H-NS histone family KAB01_03869 PF13614 AAA domain KAB01_03870 PF02195 ParB-like nuclease domain KAB01_03870 PF17762 HTH domain found in ParB protein KAB01_03874 PF05816 Toxic anion resistance protein (TelA) KAB01_03891 PF00226 DnaJ domain KAB01_03891 PF01556 DnaJ C terminal domain KAB01_03891 PF00684 DnaJ central domain KAB01_03898 PF07057 DNA helicase TraI KAB01_03898 PF08751 TrwC relaxase KAB01_03898 PF18340 DNA relaxase TraI 2B/2B-like domain KAB01_03898 PF18272 single-stranded DNA binding TraI N-terminal subdomain KAB01_03906 PF00239 Resolvase, N terminal domain KAB01_03906 PF02796 Helix-turn-helix domain of resolvase KAB01_03909 PF01464 Transglycosylase SLT domain KAB01_03916 PF13098 Thioredoxin-like domain KAB01_03916 PF10411 Disulfide bond isomerase protein N-terminus