locus-tag class description KAB03_00001 PF00005 ABC transporter KAB03_00001 PF12848 ABC transporter KAB03_00002 PF09335 SNARE associated Golgi protein KAB03_00004 PF00204 DNA gyrase B KAB03_00004 PF00986 DNA gyrase B subunit, carboxyl terminus KAB03_00004 PF18053 DNA gyrase B subunit insert domain KAB03_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00004 PF01751 Toprim domain KAB03_00005 PF02463 RecF/RecN/SMC N terminal domain KAB03_00006 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB03_00006 PF02767 DNA polymerase III beta subunit, central domain KAB03_00006 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB03_00007 PF08299 Bacterial dnaA protein helix-turn-helix KAB03_00007 PF00308 Bacterial dnaA protein KAB03_00007 PF11638 DnaA N-terminal domain KAB03_00008 PF00468 Ribosomal protein L34 KAB03_00009 PF00825 Ribonuclease P KAB03_00010 PF01809 Putative membrane protein insertion efficiency factor KAB03_00011 PF02096 60Kd inner membrane protein KAB03_00011 PF14849 YidC periplasmic domain KAB03_00012 PF10396 GTP-binding protein TrmE N-terminus KAB03_00012 PF12631 MnmE helical domain KAB03_00012 PF01926 50S ribosome-binding GTPase KAB03_00013 PF02583 Metal-sensitive transcriptional repressor KAB03_00014 PF01545 Cation efflux family KAB03_00014 PF16916 Dimerisation domain of Zinc Transporter KAB03_00015 PF10411 Disulfide bond isomerase protein N-terminus KAB03_00015 PF13098 Thioredoxin-like domain KAB03_00017 PF00156 Phosphoribosyl transferase domain KAB03_00019 PF01979 Amidohydrolase family KAB03_00020 PF00355 Rieske [2Fe-2S] domain KAB03_00021 PF03738 Glutathionylspermidine synthase preATP-grasp KAB03_00023 PF03741 Integral membrane protein TerC family KAB03_00024 PF01569 PAP2 superfamily KAB03_00026 PF01225 Mur ligase family, catalytic domain KAB03_00026 PF02875 Mur ligase family, glutamate ligase domain KAB03_00026 PF08245 Mur ligase middle domain KAB03_00028 PF00731 AIR carboxylase KAB03_00029 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KAB03_00029 PF02222 ATP-grasp domain KAB03_00030 PF13406 Transglycosylase SLT domain KAB03_00034 PF00012 Hsp70 protein KAB03_00035 PF01025 GrpE KAB03_00036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00036 PF03466 LysR substrate binding domain KAB03_00040 PF07859 alpha/beta hydrolase fold KAB03_00041 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB03_00048 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_00049 PF01252 Signal peptidase (SPase) II KAB03_00050 PF06827 Zinc finger found in FPG and IleRS KAB03_00050 PF00133 tRNA synthetases class I (I, L, M and V) KAB03_00050 PF08264 Anticodon-binding domain of tRNA KAB03_00051 PF01687 Riboflavin kinase KAB03_00051 PF06574 FAD synthetase KAB03_00053 PF01048 Phosphorylase superfamily KAB03_00054 PF08362 YcdC-like protein, C-terminal region KAB03_00054 PF00440 Bacterial regulatory proteins, tetR family KAB03_00055 PF00005 ABC transporter KAB03_00056 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_00057 PF00296 Luciferase-like monooxygenase KAB03_00058 PF09084 NMT1/THI5 like KAB03_00059 PF09084 NMT1/THI5 like KAB03_00060 PF00583 Acetyltransferase (GNAT) family KAB03_00060 PF00696 Amino acid kinase family KAB03_00063 PF00106 short chain dehydrogenase KAB03_00064 PF13419 Haloacid dehalogenase-like hydrolase KAB03_00066 PF01323 DSBA-like thioredoxin domain KAB03_00067 PF00440 Bacterial regulatory proteins, tetR family KAB03_00067 PF08360 QacR-like protein, C-terminal region KAB03_00068 PF00440 Bacterial regulatory proteins, tetR family KAB03_00069 PF00175 Oxidoreductase NAD-binding domain KAB03_00070 PF00487 Fatty acid desaturase KAB03_00071 PF03725 3' exoribonuclease family, domain 2 KAB03_00071 PF01138 3' exoribonuclease family, domain 1 KAB03_00072 PF04185 Phosphoesterase family KAB03_00072 PF05506 Domain of unknown function (DUF756) KAB03_00074 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KAB03_00074 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KAB03_00075 PF01510 N-acetylmuramoyl-L-alanine amidase KAB03_00076 PF03023 Lipid II flippase MurJ KAB03_00077 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB03_00077 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_00078 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB03_00078 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_00079 PF13614 AAA domain KAB03_00079 PF13807 G-rich domain on putative tyrosine kinase KAB03_00079 PF02706 Chain length determinant protein KAB03_00080 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB03_00081 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KAB03_00081 PF10531 SLBB domain KAB03_00081 PF02563 Polysaccharide biosynthesis/export protein KAB03_00082 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB03_00082 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB03_00082 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB03_00083 PF02719 Polysaccharide biosynthesis protein KAB03_00084 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAB03_00085 PF02348 Cytidylyltransferase KAB03_00088 PF03102 NeuB family KAB03_00088 PF08666 SAF domain KAB03_00089 PF01943 Polysaccharide biosynthesis protein KAB03_00090 PF07922 Glycosyltransferase family 52 KAB03_00093 PF00535 Glycosyl transferase family 2 KAB03_00094 PF02397 Bacterial sugar transferase KAB03_00095 PF00483 Nucleotidyl transferase KAB03_00096 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB03_00096 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB03_00096 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB03_00097 PF00342 Phosphoglucose isomerase KAB03_00098 PF16363 GDP-mannose 4,6 dehydratase KAB03_00099 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB03_00099 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB03_00099 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB03_00099 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB03_00100 PF02652 L-lactate permease KAB03_00101 PF07729 FCD domain KAB03_00101 PF00392 Bacterial regulatory proteins, gntR family KAB03_00102 PF01070 FMN-dependent dehydrogenase KAB03_00103 PF09330 D-lactate dehydrogenase, membrane binding KAB03_00103 PF01565 FAD binding domain KAB03_00104 PF00155 Aminotransferase class I and II KAB03_00105 PF07729 FCD domain KAB03_00105 PF00392 Bacterial regulatory proteins, gntR family KAB03_00107 PF00285 Citrate synthase, C-terminal domain KAB03_00108 PF00330 Aconitase family (aconitate hydratase) KAB03_00108 PF00694 Aconitase C-terminal domain KAB03_00111 PF00293 NUDIX domain KAB03_00115 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_00115 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_00118 PF00849 RNA pseudouridylate synthase KAB03_00121 PF07715 TonB-dependent Receptor Plug Domain KAB03_00121 PF00593 TonB dependent receptor KAB03_00123 PF01037 Lrp/AsnC ligand binding domain KAB03_00124 PF01266 FAD dependent oxidoreductase KAB03_00125 PF01168 Alanine racemase, N-terminal domain KAB03_00125 PF00842 Alanine racemase, C-terminal domain KAB03_00126 PF01042 Endoribonuclease L-PSP KAB03_00127 PF00324 Amino acid permease KAB03_00128 PF00324 Amino acid permease KAB03_00130 PF00171 Aldehyde dehydrogenase family KAB03_00131 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB03_00131 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB03_00132 PF00501 AMP-binding enzyme KAB03_00132 PF13193 AMP-binding enzyme C-terminal domain KAB03_00133 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_00133 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_00133 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_00134 PF00378 Enoyl-CoA hydratase/isomerase KAB03_00135 PF00378 Enoyl-CoA hydratase/isomerase KAB03_00136 PF00083 Sugar (and other) transporter KAB03_00136 PF07690 Major Facilitator Superfamily KAB03_00137 PF00765 Autoinducer synthase KAB03_00139 PF00196 Bacterial regulatory proteins, luxR family KAB03_00139 PF03472 Autoinducer binding domain KAB03_00140 PF13737 Transposase DDE domain KAB03_00141 PF00501 AMP-binding enzyme KAB03_00142 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_00142 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_00142 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_00143 PF16197 Ketoacyl-synthetase C-terminal extension KAB03_00143 PF08242 Methyltransferase domain KAB03_00143 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_00143 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_00143 PF00550 Phosphopantetheine attachment site KAB03_00143 PF14765 Polyketide synthase dehydratase KAB03_00143 PF00975 Thioesterase domain KAB03_00144 PF13193 AMP-binding enzyme C-terminal domain KAB03_00144 PF00668 Condensation domain KAB03_00144 PF00550 Phosphopantetheine attachment site KAB03_00144 PF00975 Thioesterase domain KAB03_00144 PF00501 AMP-binding enzyme KAB03_00147 PF12697 Alpha/beta hydrolase family KAB03_00148 PF01648 4'-phosphopantetheinyl transferase superfamily KAB03_00151 PF01722 BolA-like protein KAB03_00153 PF13614 AAA domain KAB03_00156 PF09335 SNARE associated Golgi protein KAB03_00157 PF07681 DoxX KAB03_00158 PF04286 Protein of unknown function (DUF445) KAB03_00159 PF00958 GMP synthase C terminal domain KAB03_00159 PF00117 Glutamine amidotransferase class-I KAB03_00159 PF02540 NAD synthase KAB03_00160 PF01909 Nucleotidyltransferase domain KAB03_00160 PF13427 Domain of unknown function (DUF4111) KAB03_00161 PF03551 Transcriptional regulator PadR-like family KAB03_00163 PF05726 Pirin C-terminal cupin domain KAB03_00163 PF02678 Pirin KAB03_00167 PF03485 Arginyl tRNA synthetase N terminal domain KAB03_00167 PF05746 DALR anticodon binding domain KAB03_00167 PF00750 tRNA synthetases class I (R) KAB03_00168 PF03949 Malic enzyme, NAD binding domain KAB03_00168 PF00390 Malic enzyme, N-terminal domain KAB03_00170 PF04261 Dyp-type peroxidase family KAB03_00171 PF01810 LysE type translocator KAB03_00172 PF00950 ABC 3 transport family KAB03_00173 PF00005 ABC transporter KAB03_00177 PF00119 ATP synthase A chain KAB03_00178 PF00137 ATP synthase subunit C KAB03_00179 PF00430 ATP synthase B/B' CF(0) KAB03_00180 PF00213 ATP synthase delta (OSCP) subunit KAB03_00181 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB03_00181 PF00306 ATP synthase alpha/beta chain, C terminal domain KAB03_00181 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB03_00182 PF00231 ATP synthase KAB03_00183 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB03_00183 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB03_00184 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KAB03_00186 PF00255 Glutathione peroxidase KAB03_00188 PF07690 Major Facilitator Superfamily KAB03_00189 PF00440 Bacterial regulatory proteins, tetR family KAB03_00190 PF00892 EamA-like transporter family KAB03_00191 PF01300 Telomere recombination KAB03_00192 PF02481 DNA recombination-mediator protein A KAB03_00192 PF17782 DprA winged helix domain KAB03_00194 PF01327 Polypeptide deformylase KAB03_00199 PF00440 Bacterial regulatory proteins, tetR family KAB03_00206 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_00208 PF03358 NADPH-dependent FMN reductase KAB03_00212 PF04055 Radical SAM superfamily KAB03_00212 PF08497 Radical SAM N-terminal KAB03_00212 PF11842 Domain of unknown function (DUF3362) KAB03_00215 PF00817 impB/mucB/samB family KAB03_00215 PF11798 IMS family HHH motif KAB03_00215 PF11799 impB/mucB/samB family C-terminal domain KAB03_00217 PF07690 Major Facilitator Superfamily KAB03_00218 PF03641 Possible lysine decarboxylase KAB03_00219 PF03471 Transporter associated domain KAB03_00219 PF03741 Integral membrane protein TerC family KAB03_00220 PF02810 SEC-C motif KAB03_00221 PF03458 UPF0126 domain KAB03_00222 PF07690 Major Facilitator Superfamily KAB03_00223 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB03_00223 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB03_00224 PF00501 AMP-binding enzyme KAB03_00224 PF13193 AMP-binding enzyme C-terminal domain KAB03_00227 PF00719 Inorganic pyrophosphatase KAB03_00228 PF03573 outer membrane porin, OprD family KAB03_00231 PF00701 Dihydrodipicolinate synthetase family KAB03_00233 PF00392 Bacterial regulatory proteins, gntR family KAB03_00233 PF00155 Aminotransferase class I and II KAB03_00235 PF01078 Magnesium chelatase, subunit ChlI KAB03_00235 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB03_00237 PF00665 Integrase core domain KAB03_00243 PF00582 Universal stress protein family KAB03_00244 PF01740 STAS domain KAB03_00244 PF00916 Sulfate permease family KAB03_00249 PF00905 Penicillin binding protein transpeptidase domain KAB03_00257 PF00589 Phage integrase family KAB03_00257 PF02899 Phage integrase, N-terminal SAM-like domain KAB03_00262 PF00665 Integrase core domain KAB03_00266 PF00809 Pterin binding enzyme KAB03_00267 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB03_00267 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB03_00267 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB03_00267 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB03_00269 PF00665 Integrase core domain KAB03_00275 PF00582 Universal stress protein family KAB03_00276 PF01740 STAS domain KAB03_00276 PF00916 Sulfate permease family KAB03_00281 PF00905 Penicillin binding protein transpeptidase domain KAB03_00285 PF07690 Major Facilitator Superfamily KAB03_00286 PF00440 Bacterial regulatory proteins, tetR family KAB03_00286 PF02909 Tetracyclin repressor-like, C-terminal domain KAB03_00290 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KAB03_00291 PF01636 Phosphotransferase enzyme family KAB03_00293 PF01078 Magnesium chelatase, subunit ChlI KAB03_00293 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB03_00295 PF00543 Nitrogen regulatory protein P-II KAB03_00296 PF00909 Ammonium Transporter Family KAB03_00297 PF03477 ATP cone domain KAB03_00298 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB03_00298 PF01872 RibD C-terminal domain KAB03_00300 PF00677 Lumazine binding domain KAB03_00304 PF00883 Cytosol aminopeptidase family, catalytic domain KAB03_00304 PF02789 Cytosol aminopeptidase family, N-terminal domain KAB03_00306 PF03739 Lipopolysaccharide export system permease LptF/LptG KAB03_00307 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KAB03_00307 PF01676 Metalloenzyme superfamily KAB03_00308 PF00595 PDZ domain KAB03_00308 PF03572 Peptidase family S41 KAB03_00309 PF02954 Bacterial regulatory protein, Fis family KAB03_00309 PF00158 Sigma-54 interaction domain KAB03_00309 PF00072 Response regulator receiver domain KAB03_00310 PF00512 His Kinase A (phospho-acceptor) domain KAB03_00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00311 PF00072 Response regulator receiver domain KAB03_00311 PF00196 Bacterial regulatory proteins, luxR family KAB03_00312 PF00768 D-alanyl-D-alanine carboxypeptidase KAB03_00313 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_00314 PF03447 Homoserine dehydrogenase, NAD binding domain KAB03_00314 PF01842 ACT domain KAB03_00314 PF00742 Homoserine dehydrogenase KAB03_00315 PF13098 Thioredoxin-like domain KAB03_00315 PF10411 Disulfide bond isomerase protein N-terminus KAB03_00316 PF02899 Phage integrase, N-terminal SAM-like domain KAB03_00316 PF00589 Phage integrase family KAB03_00318 PF02421 Ferrous iron transport protein B KAB03_00318 PF07664 Ferrous iron transport protein B C terminus KAB03_00318 PF07670 Nucleoside recognition KAB03_00320 PF08245 Mur ligase middle domain KAB03_00320 PF02875 Mur ligase family, glutamate ligase domain KAB03_00321 PF01098 Cell cycle protein KAB03_00322 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB03_00323 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAB03_00324 PF00149 Calcineurin-like phosphoesterase KAB03_00325 PF00293 NUDIX domain KAB03_00326 PF13667 ThiC-associated domain KAB03_00326 PF01964 Radical SAM ThiC family KAB03_00329 PF00892 EamA-like transporter family KAB03_00330 PF02321 Outer membrane efflux protein KAB03_00331 PF01895 PhoU domain KAB03_00332 PF04362 Bacterial Fe(2+) trafficking KAB03_00333 PF00206 Lyase KAB03_00333 PF14698 Argininosuccinate lyase C-terminal KAB03_00334 PF07694 5TMR of 5TMR-LYT KAB03_00334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00334 PF06580 Histidine kinase KAB03_00335 PF04397 LytTr DNA-binding domain KAB03_00335 PF00072 Response regulator receiver domain KAB03_00336 PF03900 Porphobilinogen deaminase, C-terminal domain KAB03_00336 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAB03_00342 PF00816 H-NS histone family KAB03_00345 PF03958 Bacterial type II/III secretion system short domain KAB03_00345 PF00263 Bacterial type II and III secretion system protein KAB03_00346 PF12401 Protein of unknown function (DUF2662) KAB03_00346 PF00498 FHA domain KAB03_00347 PF13419 Haloacid dehalogenase-like hydrolase KAB03_00348 PF04715 Anthranilate synthase component I, N terminal region KAB03_00348 PF00425 chorismate binding enzyme KAB03_00353 PF03144 Elongation factor Tu domain 2 KAB03_00353 PF00009 Elongation factor Tu GTP binding domain KAB03_00353 PF03143 Elongation factor Tu C-terminal domain KAB03_00355 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAB03_00356 PF00467 KOW motif KAB03_00356 PF02357 Transcription termination factor nusG KAB03_00357 PF00298 Ribosomal protein L11, RNA binding domain KAB03_00357 PF03946 Ribosomal protein L11, N-terminal domain KAB03_00358 PF00687 Ribosomal protein L1p/L10e family KAB03_00359 PF00466 Ribosomal protein L10 KAB03_00360 PF00542 Ribosomal protein L7/L12 C-terminal domain KAB03_00360 PF16320 Ribosomal protein L7/L12 dimerisation domain KAB03_00361 PF04563 RNA polymerase beta subunit KAB03_00361 PF04561 RNA polymerase Rpb2, domain 2 KAB03_00361 PF04565 RNA polymerase Rpb2, domain 3 KAB03_00361 PF10385 RNA polymerase beta subunit external 1 domain KAB03_00361 PF00562 RNA polymerase Rpb2, domain 6 KAB03_00361 PF04560 RNA polymerase Rpb2, domain 7 KAB03_00362 PF04983 RNA polymerase Rpb1, domain 3 KAB03_00362 PF00623 RNA polymerase Rpb1, domain 2 KAB03_00362 PF04998 RNA polymerase Rpb1, domain 5 KAB03_00362 PF04997 RNA polymerase Rpb1, domain 1 KAB03_00362 PF05000 RNA polymerase Rpb1, domain 4 KAB03_00366 PF00561 alpha/beta hydrolase fold KAB03_00367 PF13726 Na+-H+ antiporter family KAB03_00367 PF03553 Na+/H+ antiporter family KAB03_00370 PF00183 Hsp90 protein KAB03_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00373 PF01323 DSBA-like thioredoxin domain KAB03_00375 PF00376 MerR family regulatory protein KAB03_00375 PF09278 MerR, DNA binding KAB03_00379 PF00108 Thiolase, N-terminal domain KAB03_00379 PF02803 Thiolase, C-terminal domain KAB03_00380 PF00378 Enoyl-CoA hydratase/isomerase KAB03_00380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB03_00380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB03_00385 PF02151 UvrB/uvrC motif KAB03_00385 PF08459 UvrC Helix-hairpin-helix N-terminal KAB03_00385 PF01541 GIY-YIG catalytic domain KAB03_00387 PF01066 CDP-alcohol phosphatidyltransferase KAB03_00388 PF12833 Helix-turn-helix domain KAB03_00388 PF02805 Metal binding domain of Ada KAB03_00388 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB03_00388 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB03_00393 PF13533 Biotin-lipoyl like KAB03_00394 PF03652 Holliday junction resolvase KAB03_00395 PF02622 Uncharacterized ACR, COG1678 KAB03_00396 PF02463 RecF/RecN/SMC N terminal domain KAB03_00398 PF06865 Pyrimidine/purine nucleoside phosphorylase KAB03_00399 PF00588 SpoU rRNA Methylase family KAB03_00399 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB03_00401 PF01121 Dephospho-CoA kinase KAB03_00402 PF06750 Bacterial Peptidase A24 N-terminal domain KAB03_00402 PF01478 Type IV leader peptidase family KAB03_00403 PF00482 Type II secretion system (T2SS), protein F KAB03_00404 PF00437 Type II/IV secretion system protein KAB03_00404 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAB03_00405 PF00121 Triosephosphate isomerase KAB03_00406 PF03840 Preprotein translocase SecG subunit KAB03_00410 PF17384 RimP C-terminal SH3 domain KAB03_00410 PF02576 RimP N-terminal domain KAB03_00411 PF08529 NusA N-terminal domain KAB03_00411 PF00575 S1 RNA binding domain KAB03_00411 PF13184 NusA-like KH domain KAB03_00412 PF00009 Elongation factor Tu GTP binding domain KAB03_00412 PF11987 Translation-initiation factor 2 KAB03_00412 PF04760 Translation initiation factor IF-2, N-terminal region KAB03_00412 PF08364 Bacterial translation initiation factor IF-2 associated region KAB03_00413 PF02033 Ribosome-binding factor A KAB03_00415 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KAB03_00417 PF00361 Proton-conducting membrane transporter KAB03_00418 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB03_00419 PF13244 Domain of unknown function (DUF4040) KAB03_00419 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KAB03_00419 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB03_00419 PF00361 Proton-conducting membrane transporter KAB03_00420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB03_00420 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KAB03_00420 PF13244 Domain of unknown function (DUF4040) KAB03_00420 PF00361 Proton-conducting membrane transporter KAB03_00423 PF01502 Phosphoribosyl-AMP cyclohydrolase KAB03_00424 PF01494 FAD binding domain KAB03_00425 PF03109 ABC1 family KAB03_00427 PF01209 ubiE/COQ5 methyltransferase family KAB03_00429 PF03976 Polyphosphate kinase 2 (PPK2) KAB03_00431 PF17946 RecC C-terminal domain KAB03_00432 PF12705 PD-(D/E)XK nuclease superfamily KAB03_00432 PF00580 UvrD/REP helicase N-terminal domain KAB03_00432 PF13361 UvrD-like helicase C-terminal domain KAB03_00433 PF13538 UvrD-like helicase C-terminal domain KAB03_00435 PF00312 Ribosomal protein S15 KAB03_00436 PF03725 3' exoribonuclease family, domain 2 KAB03_00436 PF00013 KH domain KAB03_00436 PF00575 S1 RNA binding domain KAB03_00436 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAB03_00436 PF01138 3' exoribonuclease family, domain 1 KAB03_00437 PF01544 CorA-like Mg2+ transporter protein KAB03_00439 PF00226 DnaJ domain KAB03_00439 PF01556 DnaJ C terminal domain KAB03_00441 PF01430 Hsp33 protein KAB03_00442 PF02254 TrkA-N domain KAB03_00442 PF00999 Sodium/hydrogen exchanger family KAB03_00443 PF00271 Helicase conserved C-terminal domain KAB03_00443 PF17764 3′ DNA-binding domain (3′BD) KAB03_00443 PF00270 DEAD/DEAH box helicase KAB03_00443 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAB03_00443 PF18074 Primosomal protein N C-terminal domain KAB03_00444 PF00482 Type II secretion system (T2SS), protein F KAB03_00445 PF08334 Type II secretion system (T2SS), protein G KAB03_00445 PF07963 Prokaryotic N-terminal methylation motif KAB03_00447 PF01588 Putative tRNA binding domain KAB03_00448 PF00795 Carbon-nitrogen hydrolase KAB03_00449 PF00571 CBS domain KAB03_00449 PF03471 Transporter associated domain KAB03_00450 PF01206 Sulfurtransferase TusA KAB03_00453 PF01177 Asp/Glu/Hydantoin racemase KAB03_00455 PF00762 Ferrochelatase KAB03_00456 PF00753 Metallo-beta-lactamase superfamily KAB03_00457 PF03884 DNA gyrase inhibitor YacG KAB03_00461 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KAB03_00463 PF01197 Ribosomal protein L31 KAB03_00464 PF03109 ABC1 family KAB03_00465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_00465 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB03_00466 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB03_00466 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_00466 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_00467 PF01554 MatE KAB03_00469 PF04055 Radical SAM superfamily KAB03_00469 PF06969 HemN C-terminal domain KAB03_00470 PF00106 short chain dehydrogenase KAB03_00471 PF03466 LysR substrate binding domain KAB03_00471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00474 PF00501 AMP-binding enzyme KAB03_00474 PF13193 AMP-binding enzyme C-terminal domain KAB03_00475 PF00575 S1 RNA binding domain KAB03_00475 PF10150 Ribonuclease E/G family KAB03_00475 PF12111 Polyribonucleotide phosphorylase C terminal KAB03_00476 PF00849 RNA pseudouridylate synthase KAB03_00476 PF01479 S4 domain KAB03_00477 PF13419 Haloacid dehalogenase-like hydrolase KAB03_00478 PF13280 WYL domain KAB03_00478 PF08279 HTH domain KAB03_00479 PF02798 Glutathione S-transferase, N-terminal domain KAB03_00481 PF03466 LysR substrate binding domain KAB03_00481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00482 PF12706 Beta-lactamase superfamily domain KAB03_00483 PF00141 Peroxidase KAB03_00484 PF02896 PEP-utilising enzyme, TIM barrel domain KAB03_00484 PF01590 GAF domain KAB03_00484 PF00391 PEP-utilising enzyme, mobile domain KAB03_00484 PF05524 PEP-utilising enzyme, N-terminal KAB03_00485 PF00293 NUDIX domain KAB03_00489 PF03466 LysR substrate binding domain KAB03_00489 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00491 PF00330 Aconitase family (aconitate hydratase) KAB03_00492 PF00694 Aconitase C-terminal domain KAB03_00494 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB03_00497 PF01176 Translation initiation factor 1A / IF-1 KAB03_00499 PF01416 tRNA pseudouridine synthase KAB03_00503 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB03_00503 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB03_00505 PF00375 Sodium:dicarboxylate symporter family KAB03_00507 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB03_00508 PF01810 LysE type translocator KAB03_00511 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_00511 PF00107 Zinc-binding dehydrogenase KAB03_00512 PF01638 HxlR-like helix-turn-helix KAB03_00514 PF01131 DNA topoisomerase KAB03_00514 PF01751 Toprim domain KAB03_00514 PF01396 Topoisomerase DNA binding C4 zinc finger KAB03_00514 PF08272 Topoisomerase I zinc-ribbon-like KAB03_00517 PF00580 UvrD/REP helicase N-terminal domain KAB03_00517 PF13361 UvrD-like helicase C-terminal domain KAB03_00518 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KAB03_00522 PF02254 TrkA-N domain KAB03_00522 PF00999 Sodium/hydrogen exchanger family KAB03_00523 PF00471 Ribosomal protein L33 KAB03_00524 PF00830 Ribosomal L28 family KAB03_00525 PF00171 Aldehyde dehydrogenase family KAB03_00527 PF00551 Formyl transferase KAB03_00527 PF01842 ACT domain KAB03_00529 PF01618 MotA/TolQ/ExbB proton channel family KAB03_00531 PF01625 Peptide methionine sulfoxide reductase KAB03_00533 PF00186 Dihydrofolate reductase KAB03_00534 PF00303 Thymidylate synthase KAB03_00537 PF01790 Prolipoprotein diacylglyceryl transferase KAB03_00541 PF00902 Sec-independent protein translocase protein (TatC) KAB03_00542 PF02416 mttA/Hcf106 family KAB03_00543 PF02416 mttA/Hcf106 family KAB03_00545 PF01725 Ham1 family KAB03_00547 PF07021 Methionine biosynthesis protein MetW KAB03_00547 PF00561 alpha/beta hydrolase fold KAB03_00548 PF00561 alpha/beta hydrolase fold KAB03_00549 PF08502 LeuA allosteric (dimerisation) domain KAB03_00549 PF00682 HMGL-like KAB03_00550 PF13640 2OG-Fe(II) oxygenase superfamily KAB03_00550 PF18331 PKHD-type hydroxylase C-terminal domain KAB03_00551 PF07715 TonB-dependent Receptor Plug Domain KAB03_00551 PF00593 TonB dependent receptor KAB03_00552 PF05698 Bacterial trigger factor protein (TF) C-terminus KAB03_00552 PF05697 Bacterial trigger factor protein (TF) KAB03_00552 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_00553 PF00574 Clp protease KAB03_00554 PF10431 C-terminal, D2-small domain, of ClpB protein KAB03_00554 PF07724 AAA domain (Cdc48 subfamily) KAB03_00554 PF06689 ClpX C4-type zinc finger KAB03_00557 PF05681 Fumarate hydratase (Fumerase) KAB03_00557 PF05683 Fumarase C-terminus KAB03_00558 PF01515 Phosphate acetyl/butaryl transferase KAB03_00558 PF07085 DRTGG domain KAB03_00559 PF00871 Acetokinase family KAB03_00562 PF00920 Dehydratase family KAB03_00563 PF01081 KDPG and KHG aldolase KAB03_00564 PF02447 GntP family permease KAB03_00565 PF01202 Shikimate kinase KAB03_00566 PF00171 Aldehyde dehydrogenase family KAB03_00567 PF00171 Aldehyde dehydrogenase family KAB03_00568 PF00561 alpha/beta hydrolase fold KAB03_00570 PF00933 Glycosyl hydrolase family 3 N terminal domain KAB03_00571 PF00595 PDZ domain KAB03_00571 PF11818 C-terminal domain of tail specific protease (DUF3340) KAB03_00571 PF03572 Peptidase family S41 KAB03_00571 PF17804 Tail specific protease N-terminal domain KAB03_00572 PF13439 Glycosyltransferase Family 4 KAB03_00572 PF00534 Glycosyl transferases group 1 KAB03_00573 PF01569 PAP2 superfamily KAB03_00574 PF04384 Iron-sulphur cluster assembly KAB03_00575 PF00334 Nucleoside diphosphate kinase KAB03_00576 PF04055 Radical SAM superfamily KAB03_00578 PF13464 Domain of unknown function (DUF4115) KAB03_00579 PF04551 GcpE protein KAB03_00580 PF03129 Anticodon binding domain KAB03_00580 PF13393 Histidyl-tRNA synthetase KAB03_00582 PF13360 PQQ-like domain KAB03_00583 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAB03_00583 PF01926 50S ribosome-binding GTPase KAB03_00586 PF00550 Phosphopantetheine attachment site KAB03_00587 PF00550 Phosphopantetheine attachment site KAB03_00589 PF13193 AMP-binding enzyme C-terminal domain KAB03_00589 PF00501 AMP-binding enzyme KAB03_00592 PF00221 Aromatic amino acid lyase KAB03_00596 PF04820 Tryptophan halogenase KAB03_00598 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_00598 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_00601 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_00601 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_00604 PF02556 Preprotein translocase subunit SecB KAB03_00605 PF00462 Glutaredoxin KAB03_00607 PF03193 RsgA GTPase KAB03_00608 PF00929 Exonuclease KAB03_00611 PF02321 Outer membrane efflux protein KAB03_00612 PF00005 ABC transporter KAB03_00612 PF12704 MacB-like periplasmic core domain KAB03_00612 PF02687 FtsX-like permease family KAB03_00613 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_00616 PF09334 tRNA synthetases class I (M) KAB03_00616 PF08264 Anticodon-binding domain of tRNA KAB03_00616 PF00133 tRNA synthetases class I (I, L, M and V) KAB03_00616 PF13603 Leucyl-tRNA synthetase, Domain 2 KAB03_00618 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB03_00618 PF00205 Thiamine pyrophosphate enzyme, central domain KAB03_00618 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB03_00619 PF10369 Small subunit of acetolactate synthase KAB03_00620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAB03_00620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAB03_00621 PF00563 EAL domain KAB03_00621 PF00990 Diguanylate cyclase, GGDEF domain KAB03_00621 PF03707 Bacterial signalling protein N terminal repeat KAB03_00625 PF00009 Elongation factor Tu GTP binding domain KAB03_00625 PF03144 Elongation factor Tu domain 2 KAB03_00625 PF16658 Class II release factor RF3, C-terminal domain KAB03_00628 PF01026 TatD related DNase KAB03_00629 PF00330 Aconitase family (aconitate hydratase) KAB03_00629 PF00694 Aconitase C-terminal domain KAB03_00631 PF00899 ThiF family KAB03_00632 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00632 PF03466 LysR substrate binding domain KAB03_00634 PF01207 Dihydrouridine synthase (Dus) KAB03_00635 PF07690 Major Facilitator Superfamily KAB03_00637 PF00892 EamA-like transporter family KAB03_00638 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAB03_00638 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAB03_00639 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KAB03_00640 PF02233 NAD(P) transhydrogenase beta subunit KAB03_00641 PF00106 short chain dehydrogenase KAB03_00643 PF01261 Xylose isomerase-like TIM barrel KAB03_00644 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB03_00644 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB03_00645 PF00378 Enoyl-CoA hydratase/isomerase KAB03_00646 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00646 PF00512 His Kinase A (phospho-acceptor) domain KAB03_00646 PF01627 Hpt domain KAB03_00646 PF00072 Response regulator receiver domain KAB03_00646 PF00672 HAMP domain KAB03_00646 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAB03_00647 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_00649 PF05958 tRNA (Uracil-5-)-methyltransferase KAB03_00650 PF02824 TGS domain KAB03_00650 PF04607 Region found in RelA / SpoT proteins KAB03_00650 PF13291 ACT domain KAB03_00652 PF03819 MazG nucleotide pyrophosphohydrolase domain KAB03_00654 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB03_00654 PF01743 Poly A polymerase head domain KAB03_00654 PF12626 Polymerase A arginine-rich C-terminus KAB03_00655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAB03_00656 PF02548 Ketopantoate hydroxymethyltransferase KAB03_00657 PF02569 Pantoate-beta-alanine ligase KAB03_00658 PF03668 P-loop ATPase protein family KAB03_00659 PF00381 PTS HPr component phosphorylation site KAB03_00660 PF04751 Protein of unknown function (DUF615) KAB03_00661 PF00501 AMP-binding enzyme KAB03_00661 PF13193 AMP-binding enzyme C-terminal domain KAB03_00662 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB03_00662 PF03129 Anticodon binding domain KAB03_00662 PF02824 TGS domain KAB03_00662 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB03_00663 PF00707 Translation initiation factor IF-3, C-terminal domain KAB03_00663 PF05198 Translation initiation factor IF-3, N-terminal domain KAB03_00664 PF00043 Glutathione S-transferase, C-terminal domain KAB03_00664 PF02798 Glutathione S-transferase, N-terminal domain KAB03_00665 PF09335 SNARE associated Golgi protein KAB03_00666 PF07690 Major Facilitator Superfamily KAB03_00667 PF01632 Ribosomal protein L35 KAB03_00668 PF00453 Ribosomal protein L20 KAB03_00672 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAB03_00672 PF01409 tRNA synthetases class II core domain (F) KAB03_00673 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAB03_00673 PF01588 Putative tRNA binding domain KAB03_00673 PF03147 Ferredoxin-fold anticodon binding domain KAB03_00673 PF03484 tRNA synthetase B5 domain KAB03_00673 PF03483 B3/4 domain KAB03_00674 PF00216 Bacterial DNA-binding protein KAB03_00676 PF07497 Rho termination factor, RNA-binding domain KAB03_00676 PF07498 Rho termination factor, N-terminal domain KAB03_00676 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB03_00677 PF00085 Thioredoxin KAB03_00678 PF02541 Ppx/GppA phosphatase family KAB03_00679 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KAB03_00680 PF01171 PP-loop family KAB03_00680 PF09179 TilS substrate binding domain KAB03_00680 PF11734 TilS substrate C-terminal domain KAB03_00681 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB03_00681 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB03_00682 PF02325 YGGT family KAB03_00683 PF01612 3'-5' exonuclease KAB03_00683 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAB03_00683 PF00476 DNA polymerase family A KAB03_00683 PF01367 5'-3' exonuclease, C-terminal SAM fold KAB03_00690 PF00437 Type II/IV secretion system protein KAB03_00691 PF02566 OsmC-like protein KAB03_00692 PF01047 MarR family KAB03_00694 PF00795 Carbon-nitrogen hydrolase KAB03_00703 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAB03_00703 PF04963 Sigma-54 factor, core binding domain KAB03_00703 PF04552 Sigma-54, DNA binding domain KAB03_00704 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAB03_00705 PF01722 BolA-like protein KAB03_00706 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB03_00707 PF01634 ATP phosphoribosyltransferase KAB03_00708 PF00815 Histidinol dehydrogenase KAB03_00709 PF00155 Aminotransferase class I and II KAB03_00710 PF00425 chorismate binding enzyme KAB03_00710 PF04715 Anthranilate synthase component I, N terminal region KAB03_00719 PF00293 NUDIX domain KAB03_00720 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_00721 PF00814 Glycoprotease family KAB03_00722 PF04445 Putative SAM-dependent methyltransferase KAB03_00724 PF00756 Putative esterase KAB03_00726 PF00834 Ribulose-phosphate 3 epimerase family KAB03_00729 PF07732 Multicopper oxidase KAB03_00729 PF00394 Multicopper oxidase KAB03_00729 PF07731 Multicopper oxidase KAB03_00730 PF05275 Copper resistance protein B precursor (CopB) KAB03_00732 PF00893 Small Multidrug Resistance protein KAB03_00733 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB03_00733 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB03_00734 PF01960 ArgJ family KAB03_00735 PF02445 Quinolinate synthetase A protein KAB03_00740 PF00962 Adenosine/AMP deaminase KAB03_00741 PF00107 Zinc-binding dehydrogenase KAB03_00741 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_00742 PF03466 LysR substrate binding domain KAB03_00742 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00743 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_00743 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_00743 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_00744 PF07690 Major Facilitator Superfamily KAB03_00745 PF02515 CoA-transferase family III KAB03_00747 PF00890 FAD binding domain KAB03_00747 PF14537 Cytochrome c3 KAB03_00748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00748 PF03466 LysR substrate binding domain KAB03_00750 PF07690 Major Facilitator Superfamily KAB03_00751 PF03466 LysR substrate binding domain KAB03_00751 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00753 PF01546 Peptidase family M20/M25/M40 KAB03_00753 PF07687 Peptidase dimerisation domain KAB03_00754 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB03_00754 PF12833 Helix-turn-helix domain KAB03_00756 PF01810 LysE type translocator KAB03_00757 PF03466 LysR substrate binding domain KAB03_00757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00759 PF08267 Cobalamin-independent synthase, N-terminal domain KAB03_00759 PF01717 Cobalamin-independent synthase, Catalytic domain KAB03_00760 PF01613 Flavin reductase like domain KAB03_00763 PF13737 Transposase DDE domain KAB03_00767 PF02567 Phenazine biosynthesis-like protein KAB03_00771 PF13360 PQQ-like domain KAB03_00771 PF01011 PQQ enzyme repeat KAB03_00785 PF00512 His Kinase A (phospho-acceptor) domain KAB03_00785 PF00672 HAMP domain KAB03_00785 PF13756 Stimulus-sensing domain KAB03_00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00785 PF13755 Sensor N-terminal transmembrane domain KAB03_00786 PF00268 Ribonucleotide reductase, small chain KAB03_00788 PF02867 Ribonucleotide reductase, barrel domain KAB03_00788 PF03477 ATP cone domain KAB03_00788 PF00317 Ribonucleotide reductase, all-alpha domain KAB03_00789 PF00486 Transcriptional regulatory protein, C terminal KAB03_00789 PF00072 Response regulator receiver domain KAB03_00790 PF00512 His Kinase A (phospho-acceptor) domain KAB03_00790 PF00672 HAMP domain KAB03_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_00792 PF00990 Diguanylate cyclase, GGDEF domain KAB03_00792 PF17151 Periplasmic sensor domain KAB03_00793 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KAB03_00794 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAB03_00795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAB03_00795 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KAB03_00797 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB03_00797 PF10531 SLBB domain KAB03_00797 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAB03_00798 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB03_00798 PF00384 Molybdopterin oxidoreductase KAB03_00798 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB03_00799 PF00146 NADH dehydrogenase KAB03_00800 PF12838 4Fe-4S dicluster domain KAB03_00801 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KAB03_00802 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB03_00803 PF00361 Proton-conducting membrane transporter KAB03_00803 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB03_00804 PF00361 Proton-conducting membrane transporter KAB03_00805 PF00361 Proton-conducting membrane transporter KAB03_00807 PF00313 'Cold-shock' DNA-binding domain KAB03_00808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00808 PF03466 LysR substrate binding domain KAB03_00809 PF00970 Oxidoreductase FAD-binding domain KAB03_00809 PF00175 Oxidoreductase NAD-binding domain KAB03_00812 PF05552 Conserved TM helix KAB03_00815 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_00816 PF13533 Biotin-lipoyl like KAB03_00821 PF01588 Putative tRNA binding domain KAB03_00821 PF09334 tRNA synthetases class I (M) KAB03_00823 PF10609 NUBPL iron-transfer P-loop NTPase KAB03_00824 PF01048 Phosphorylase superfamily KAB03_00827 PF00692 dUTPase KAB03_00833 PF01207 Dihydrouridine synthase (Dus) KAB03_00835 PF02978 Signal peptide binding domain KAB03_00835 PF02881 SRP54-type protein, helical bundle domain KAB03_00835 PF00448 SRP54-type protein, GTPase domain KAB03_00836 PF03309 Type III pantothenate kinase KAB03_00838 PF01925 Sulfite exporter TauE/SafE KAB03_00840 PF02463 RecF/RecN/SMC N terminal domain KAB03_00840 PF06470 SMC proteins Flexible Hinge Domain KAB03_00842 PF03120 NAD-dependent DNA ligase OB-fold domain KAB03_00842 PF12826 Helix-hairpin-helix motif KAB03_00842 PF00533 BRCA1 C Terminus (BRCT) domain KAB03_00842 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAB03_00842 PF01653 NAD-dependent DNA ligase adenylation domain KAB03_00843 PF00210 Ferritin-like domain KAB03_00844 PF07690 Major Facilitator Superfamily KAB03_00845 PF00982 Glycosyltransferase family 20 KAB03_00846 PF02358 Trehalose-phosphatase KAB03_00847 PF12697 Alpha/beta hydrolase family KAB03_00847 PF08241 Methyltransferase domain KAB03_00848 PF00202 Aminotransferase class-III KAB03_00848 PF04055 Radical SAM superfamily KAB03_00848 PF06968 Biotin and Thiamin Synthesis associated domain KAB03_00849 PF00155 Aminotransferase class I and II KAB03_00852 PF01479 S4 domain KAB03_00852 PF00849 RNA pseudouridylate synthase KAB03_00853 PF04079 Segregation and condensation complex subunit ScpB KAB03_00854 PF02616 Segregation and condensation protein ScpA KAB03_00855 PF01300 Telomere recombination KAB03_00856 PF04315 Elongation factor P hydroxylase KAB03_00857 PF02620 Large ribosomal RNA subunit accumulation protein YceD KAB03_00858 PF01783 Ribosomal L32p protein family KAB03_00859 PF00698 Acyl transferase domain KAB03_00861 PF00550 Phosphopantetheine attachment site KAB03_00862 PF01476 LysM domain KAB03_00862 PF04972 BON domain KAB03_00863 PF02581 Thiamine monophosphate synthase KAB03_00863 PF08543 Phosphomethylpyrimidine kinase KAB03_00863 PF03070 TENA/THI-4/PQQC family KAB03_00865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB03_00868 PF02261 Aspartate decarboxylase KAB03_00869 PF01195 Peptidyl-tRNA hydrolase KAB03_00870 PF01386 Ribosomal L25p family KAB03_00871 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB03_00871 PF14572 Phosphoribosyl synthetase-associated domain KAB03_00876 PF03550 Outer membrane lipoprotein LolB KAB03_00878 PF01488 Shikimate / quinate 5-dehydrogenase KAB03_00878 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAB03_00878 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAB03_00879 PF01807 CHC2 zinc finger KAB03_00879 PF10410 DnaB-helicase binding domain of primase KAB03_00879 PF08278 DNA primase DnaG DnaB-binding KAB03_00879 PF08275 DNA primase catalytic core, N-terminal domain KAB03_00880 PF13525 Outer membrane lipoprotein KAB03_00881 PF00849 RNA pseudouridylate synthase KAB03_00881 PF01479 S4 domain KAB03_00883 PF03358 NADPH-dependent FMN reductase KAB03_00884 PF01668 SmpB protein KAB03_00885 PF01467 Cytidylyltransferase-like KAB03_00886 PF00037 4Fe-4S binding domain KAB03_00889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_00889 PF03466 LysR substrate binding domain KAB03_00890 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB03_00891 PF02028 BCCT, betaine/carnitine/choline family transporter KAB03_00892 PF07859 alpha/beta hydrolase fold KAB03_00893 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB03_00893 PF00355 Rieske [2Fe-2S] domain KAB03_00894 PF00171 Aldehyde dehydrogenase family KAB03_00895 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_00895 PF00970 Oxidoreductase FAD-binding domain KAB03_00895 PF00175 Oxidoreductase NAD-binding domain KAB03_00898 PF02540 NAD synthase KAB03_00898 PF00795 Carbon-nitrogen hydrolase KAB03_00900 PF02678 Pirin KAB03_00900 PF05726 Pirin C-terminal cupin domain KAB03_00902 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_00902 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_00904 PF00164 Ribosomal protein S12/S23 KAB03_00905 PF00177 Ribosomal protein S7p/S5e KAB03_00906 PF14492 Elongation Factor G, domain II KAB03_00906 PF00679 Elongation factor G C-terminus KAB03_00906 PF03764 Elongation factor G, domain IV KAB03_00906 PF00009 Elongation factor Tu GTP binding domain KAB03_00906 PF03144 Elongation factor Tu domain 2 KAB03_00907 PF00009 Elongation factor Tu GTP binding domain KAB03_00907 PF03143 Elongation factor Tu C-terminal domain KAB03_00907 PF03144 Elongation factor Tu domain 2 KAB03_00910 PF00583 Acetyltransferase (GNAT) family KAB03_00911 PF04376 Arginine-tRNA-protein transferase, N terminus KAB03_00911 PF04377 Arginine-tRNA-protein transferase, C terminus KAB03_00912 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KAB03_00913 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_00914 PF09397 Ftsk gamma domain KAB03_00914 PF01580 FtsK/SpoIIIE family KAB03_00914 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAB03_00914 PF17854 FtsK alpha domain KAB03_00915 PF01810 LysE type translocator KAB03_00919 PF03776 Septum formation topological specificity factor MinE KAB03_00920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAB03_00921 PF03775 Septum formation inhibitor MinC, C-terminal domain KAB03_00923 PF01553 Acyltransferase KAB03_00924 PF13488 Glycine zipper KAB03_00924 PF00691 OmpA family KAB03_00926 PF13361 UvrD-like helicase C-terminal domain KAB03_00926 PF00580 UvrD/REP helicase N-terminal domain KAB03_00927 PF00692 dUTPase KAB03_00928 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB03_00928 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB03_00928 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB03_00928 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB03_00929 PF00696 Amino acid kinase family KAB03_00931 PF13230 Glutamine amidotransferases class-II KAB03_00932 PF01814 Hemerythrin HHE cation binding domain KAB03_00934 PF03658 RnfH family Ubiquitin KAB03_00935 PF04355 SmpA / OmlA family KAB03_00936 PF01475 Ferric uptake regulator family KAB03_00937 PF00437 Type II/IV secretion system protein KAB03_00938 PF00437 Type II/IV secretion system protein KAB03_00939 PF01168 Alanine racemase, N-terminal domain KAB03_00941 PF12320 Type 5 capsule protein repressor C-terminal domain KAB03_00941 PF00149 Calcineurin-like phosphoesterase KAB03_00945 PF08338 Domain of unknown function (DUF1731) KAB03_00945 PF01370 NAD dependent epimerase/dehydratase family KAB03_00946 PF01266 FAD dependent oxidoreductase KAB03_00947 PF00490 Delta-aminolevulinic acid dehydratase KAB03_00948 PF03061 Thioesterase superfamily KAB03_00949 PF13533 Biotin-lipoyl like KAB03_00950 PF07690 Major Facilitator Superfamily KAB03_00965 PF00929 Exonuclease KAB03_00981 PF00145 C-5 cytosine-specific DNA methylase KAB03_00983 PF01695 IstB-like ATP binding protein KAB03_01023 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KAB03_01031 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB03_01031 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB03_01031 PF02767 DNA polymerase III beta subunit, central domain KAB03_01051 PF00589 Phage integrase family KAB03_01051 PF13356 Arm DNA-binding domain KAB03_01067 PF07693 KAP family P-loop domain KAB03_01070 PF01026 TatD related DNase KAB03_01075 PF00083 Sugar (and other) transporter KAB03_01076 PF00701 Dihydrodipicolinate synthetase family KAB03_01078 PF08281 Sigma-70, region 4 KAB03_01078 PF04542 Sigma-70 region 2 KAB03_01080 PF07715 TonB-dependent Receptor Plug Domain KAB03_01080 PF00593 TonB dependent receptor KAB03_01084 PF01126 Heme oxygenase KAB03_01089 PF13520 Amino acid permease KAB03_01090 PF02574 Homocysteine S-methyltransferase KAB03_01092 PF06039 Malate:quinone oxidoreductase (Mqo) KAB03_01093 PF00732 GMC oxidoreductase KAB03_01093 PF05199 GMC oxidoreductase KAB03_01094 PF00171 Aldehyde dehydrogenase family KAB03_01095 PF00440 Bacterial regulatory proteins, tetR family KAB03_01095 PF13977 BetI-type transcriptional repressor, C-terminal KAB03_01096 PF02028 BCCT, betaine/carnitine/choline family transporter KAB03_01097 PF02028 BCCT, betaine/carnitine/choline family transporter KAB03_01099 PF03061 Thioesterase superfamily KAB03_01101 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB03_01101 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB03_01102 PF00375 Sodium:dicarboxylate symporter family KAB03_01103 PF07152 YaeQ protein KAB03_01104 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_01105 PF13737 Transposase DDE domain KAB03_01106 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_01107 PF01522 Polysaccharide deacetylase KAB03_01107 PF14883 Hypothetical glycosyl hydrolase family 13 KAB03_01108 PF00535 Glycosyl transferase family 2 KAB03_01110 PF00378 Enoyl-CoA hydratase/isomerase KAB03_01113 PF09339 IclR helix-turn-helix domain KAB03_01113 PF01614 Bacterial transcriptional regulator KAB03_01114 PF00355 Rieske [2Fe-2S] domain KAB03_01116 PF00355 Rieske [2Fe-2S] domain KAB03_01118 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB03_01119 PF14759 Reductase C-terminal KAB03_01119 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01120 PF07690 Major Facilitator Superfamily KAB03_01122 PF12697 Alpha/beta hydrolase family KAB03_01124 PF03447 Homoserine dehydrogenase, NAD binding domain KAB03_01124 PF01958 Domain of unknown function DUF108 KAB03_01125 PF00171 Aldehyde dehydrogenase family KAB03_01126 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB03_01126 PF00205 Thiamine pyrophosphate enzyme, central domain KAB03_01126 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB03_01128 PF07690 Major Facilitator Superfamily KAB03_01130 PF01327 Polypeptide deformylase KAB03_01131 PF04960 Glutaminase KAB03_01132 PF12833 Helix-turn-helix domain KAB03_01132 PF02311 AraC-like ligand binding domain KAB03_01133 PF07690 Major Facilitator Superfamily KAB03_01134 PF01263 Aldose 1-epimerase KAB03_01136 PF03466 LysR substrate binding domain KAB03_01136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01138 PF07690 Major Facilitator Superfamily KAB03_01139 PF00456 Transketolase, thiamine diphosphate binding domain KAB03_01140 PF02780 Transketolase, C-terminal domain KAB03_01140 PF02779 Transketolase, pyrimidine binding domain KAB03_01141 PF02310 B12 binding domain KAB03_01141 PF02574 Homocysteine S-methyltransferase KAB03_01141 PF00809 Pterin binding enzyme KAB03_01141 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAB03_01141 PF02607 B12 binding domain KAB03_01142 PF01384 Phosphate transporter family KAB03_01143 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_01146 PF03781 Sulfatase-modifying factor enzyme 1 KAB03_01147 PF00884 Sulfatase KAB03_01149 PF01521 Iron-sulphur cluster biosynthesis KAB03_01149 PF01106 NifU-like domain KAB03_01150 PF07715 TonB-dependent Receptor Plug Domain KAB03_01150 PF00593 TonB dependent receptor KAB03_01152 PF00561 alpha/beta hydrolase fold KAB03_01153 PF00484 Carbonic anhydrase KAB03_01154 PF13472 GDSL-like Lipase/Acylhydrolase family KAB03_01155 PF00005 ABC transporter KAB03_01157 PF01694 Rhomboid family KAB03_01158 PF00912 Transglycosylase KAB03_01159 PF17941 Polyphosphate kinase C-terminal domain 1 KAB03_01159 PF13090 Polyphosphate kinase C-terminal domain 2 KAB03_01159 PF02503 Polyphosphate kinase middle domain KAB03_01159 PF13089 Polyphosphate kinase N-terminal domain KAB03_01161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01161 PF03466 LysR substrate binding domain KAB03_01162 PF00561 alpha/beta hydrolase fold KAB03_01163 PF18113 Rubredoxin binding C-terminal domain KAB03_01163 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01164 PF00301 Rubredoxin KAB03_01167 PF00152 tRNA synthetases class II (D, K and N) KAB03_01167 PF01336 OB-fold nucleic acid binding domain KAB03_01168 PF14052 Capsule assembly protein Wzi KAB03_01172 PF01507 Phosphoadenosine phosphosulfate reductase family KAB03_01173 PF00009 Elongation factor Tu GTP binding domain KAB03_01176 PF03600 Citrate transporter KAB03_01177 PF03471 Transporter associated domain KAB03_01177 PF00571 CBS domain KAB03_01177 PF01595 Cyclin M transmembrane N-terminal domain KAB03_01178 PF03466 LysR substrate binding domain KAB03_01178 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01179 PF00463 Isocitrate lyase family KAB03_01182 PF01774 UreD urease accessory protein KAB03_01183 PF00547 Urease, gamma subunit KAB03_01184 PF00699 Urease beta subunit KAB03_01185 PF01979 Amidohydrolase family KAB03_01185 PF00449 Urease alpha-subunit, N-terminal domain KAB03_01186 PF01979 Amidohydrolase family KAB03_01186 PF00449 Urease alpha-subunit, N-terminal domain KAB03_01187 PF02814 UreE urease accessory protein, N-terminal domain KAB03_01187 PF05194 UreE urease accessory protein, C-terminal domain KAB03_01188 PF01730 UreF KAB03_01189 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB03_01192 PF00905 Penicillin binding protein transpeptidase domain KAB03_01192 PF03717 Penicillin-binding Protein dimerisation domain KAB03_01195 PF05191 Adenylate kinase, active site lid KAB03_01196 PF10576 Iron-sulfur binding domain of endonuclease III KAB03_01196 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB03_01196 PF00633 Helix-hairpin-helix motif KAB03_01197 PF04060 Putative Fe-S cluster KAB03_01198 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB03_01198 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB03_01200 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAB03_01201 PF02590 Predicted SPOUT methyltransferase KAB03_01202 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_01202 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB03_01202 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAB03_01203 PF05662 Coiled stalk of trimeric autotransporter adhesin KAB03_01203 PF13018 Extended Signal Peptide of Type V secretion system KAB03_01203 PF03895 YadA-like membrane anchor domain KAB03_01203 PF05658 Head domain of trimeric autotransporter adhesin KAB03_01205 PF01812 5-formyltetrahydrofolate cyclo-ligase family KAB03_01239 PF13737 Transposase DDE domain KAB03_01270 PF01551 Peptidase family M23 KAB03_01270 PF08525 Opacity-associated protein A N-terminal motif KAB03_01270 PF01476 LysM domain KAB03_01282 PF13276 HTH-like domain KAB03_01282 PF13333 Integrase core domain KAB03_01282 PF00665 Integrase core domain KAB03_01284 PF12832 MFS_1 like family KAB03_01286 PF02785 Biotin carboxylase C-terminal domain KAB03_01286 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB03_01286 PF00289 Biotin carboxylase, N-terminal domain KAB03_01287 PF00364 Biotin-requiring enzyme KAB03_01288 PF01220 Dehydroquinase class II KAB03_01289 PF11799 impB/mucB/samB family C-terminal domain KAB03_01289 PF00817 impB/mucB/samB family KAB03_01289 PF13438 Domain of unknown function (DUF4113) KAB03_01290 PF00005 ABC transporter KAB03_01291 PF00486 Transcriptional regulatory protein, C terminal KAB03_01291 PF00072 Response regulator receiver domain KAB03_01293 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB03_01293 PF04324 BFD-like [2Fe-2S] binding domain KAB03_01293 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB03_01293 PF13806 Rieske-like [2Fe-2S] domain KAB03_01293 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01293 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB03_01294 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB03_01294 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB03_01294 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01294 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB03_01294 PF04324 BFD-like [2Fe-2S] binding domain KAB03_01295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB03_01295 PF04324 BFD-like [2Fe-2S] binding domain KAB03_01295 PF01568 Molydopterin dinucleotide binding domain KAB03_01295 PF00384 Molybdopterin oxidoreductase KAB03_01296 PF12804 MobA-like NTP transferase domain KAB03_01297 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB03_01297 PF00384 Molybdopterin oxidoreductase KAB03_01297 PF01568 Molydopterin dinucleotide binding domain KAB03_01298 PF04055 Radical SAM superfamily KAB03_01298 PF06463 Molybdenum Cofactor Synthesis C KAB03_01300 PF02391 MoaE protein KAB03_01301 PF00994 Probable molybdopterin binding domain KAB03_01301 PF01967 MoaC family KAB03_01302 PF03453 MoeA N-terminal region (domain I and II) KAB03_01302 PF00994 Probable molybdopterin binding domain KAB03_01302 PF03454 MoeA C-terminal region (domain IV) KAB03_01303 PF01638 HxlR-like helix-turn-helix KAB03_01304 PF00155 Aminotransferase class I and II KAB03_01304 PF00392 Bacterial regulatory proteins, gntR family KAB03_01305 PF00892 EamA-like transporter family KAB03_01309 PF02635 DsrE/DsrF-like family KAB03_01310 PF16363 GDP-mannose 4,6 dehydratase KAB03_01311 PF00206 Lyase KAB03_01311 PF10415 Fumarase C C-terminus KAB03_01315 PF01266 FAD dependent oxidoreductase KAB03_01317 PF02542 YgbB family KAB03_01319 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB03_01319 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB03_01321 PF13737 Transposase DDE domain KAB03_01322 PF00440 Bacterial regulatory proteins, tetR family KAB03_01323 PF00158 Sigma-54 interaction domain KAB03_01323 PF02954 Bacterial regulatory protein, Fis family KAB03_01323 PF00072 Response regulator receiver domain KAB03_01324 PF00989 PAS fold KAB03_01324 PF00512 His Kinase A (phospho-acceptor) domain KAB03_01324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_01325 PF04055 Radical SAM superfamily KAB03_01325 PF00919 Uncharacterized protein family UPF0004 KAB03_01325 PF18693 TRAM domain KAB03_01326 PF00696 Amino acid kinase family KAB03_01327 PF01765 Ribosome recycling factor KAB03_01328 PF01255 Putative undecaprenyl diphosphate synthase KAB03_01330 PF13288 DXP reductoisomerase C-terminal domain KAB03_01330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAB03_01330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAB03_01331 PF13180 PDZ domain KAB03_01331 PF17820 PDZ domain KAB03_01331 PF02163 Peptidase family M50 KAB03_01332 PF07244 Surface antigen variable number repeat KAB03_01332 PF01103 Surface antigen KAB03_01334 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAB03_01334 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_01335 PF07977 FabA-like domain KAB03_01336 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAB03_01336 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_01338 PF02631 RecX family KAB03_01339 PF00154 recA bacterial DNA recombination protein KAB03_01340 PF01479 S4 domain KAB03_01341 PF13419 Haloacid dehalogenase-like hydrolase KAB03_01346 PF01037 Lrp/AsnC ligand binding domain KAB03_01347 PF00266 Aminotransferase class-V KAB03_01348 PF00324 Amino acid permease KAB03_01351 PF00082 Subtilase family KAB03_01351 PF05922 Peptidase inhibitor I9 KAB03_01352 PF01740 STAS domain KAB03_01352 PF00916 Sulfate permease family KAB03_01353 PF02586 SOS response associated peptidase (SRAP) KAB03_01354 PF07995 Glucose / Sorbosone dehydrogenase KAB03_01356 PF00990 Diguanylate cyclase, GGDEF domain KAB03_01356 PF03707 Bacterial signalling protein N terminal repeat KAB03_01356 PF00563 EAL domain KAB03_01361 PF02378 Phosphotransferase system, EIIC KAB03_01361 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAB03_01362 PF00294 pfkB family carbohydrate kinase KAB03_01363 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAB03_01363 PF00381 PTS HPr component phosphorylation site KAB03_01363 PF02896 PEP-utilising enzyme, TIM barrel domain KAB03_01363 PF05524 PEP-utilising enzyme, N-terminal KAB03_01363 PF00391 PEP-utilising enzyme, mobile domain KAB03_01368 PF05525 Branched-chain amino acid transport protein KAB03_01369 PF00557 Metallopeptidase family M24 KAB03_01370 PF03466 LysR substrate binding domain KAB03_01370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01372 PF00462 Glutaredoxin KAB03_01373 PF00202 Aminotransferase class-III KAB03_01374 PF00478 IMP dehydrogenase / GMP reductase domain KAB03_01374 PF00571 CBS domain KAB03_01379 PF02881 SRP54-type protein, helical bundle domain KAB03_01379 PF00448 SRP54-type protein, GTPase domain KAB03_01381 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KAB03_01384 PF08173 Membrane bound YbgT-like protein KAB03_01385 PF02322 Cytochrome bd terminal oxidase subunit II KAB03_01386 PF01654 Cytochrome bd terminal oxidase subunit I KAB03_01388 PF13737 Transposase DDE domain KAB03_01389 PF07290 Protein of unknown function (DUF1449) KAB03_01391 PF00294 pfkB family carbohydrate kinase KAB03_01392 PF00593 TonB dependent receptor KAB03_01392 PF07715 TonB-dependent Receptor Plug Domain KAB03_01393 PF08367 Peptidase M16C associated KAB03_01393 PF05193 Peptidase M16 inactive domain KAB03_01393 PF00675 Insulinase (Peptidase family M16) KAB03_01394 PF02253 Phospholipase A1 KAB03_01395 PF02386 Cation transport protein KAB03_01396 PF02080 TrkA-C domain KAB03_01396 PF02254 TrkA-N domain KAB03_01397 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_01397 PF00585 C-terminal regulatory domain of Threonine dehydratase KAB03_01398 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAB03_01401 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB03_01401 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB03_01403 PF02617 ATP-dependent Clp protease adaptor protein ClpS KAB03_01404 PF17871 AAA lid domain KAB03_01404 PF07724 AAA domain (Cdc48 subfamily) KAB03_01404 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_01404 PF02861 Clp amino terminal domain, pathogenicity island component KAB03_01404 PF10431 C-terminal, D2-small domain, of ClpB protein KAB03_01405 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KAB03_01406 PF00793 DAHP synthetase I family KAB03_01409 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01409 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB03_01415 PF06418 CTP synthase N-terminus KAB03_01415 PF00117 Glutamine amidotransferase class-I KAB03_01416 PF00793 DAHP synthetase I family KAB03_01417 PF00113 Enolase, C-terminal TIM barrel domain KAB03_01417 PF03952 Enolase, N-terminal domain KAB03_01418 PF04239 Protein of unknown function (DUF421) KAB03_01419 PF04977 Septum formation initiator KAB03_01420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAB03_01421 PF01144 Coenzyme A transferase KAB03_01422 PF01144 Coenzyme A transferase KAB03_01423 PF00108 Thiolase, N-terminal domain KAB03_01423 PF02803 Thiolase, C-terminal domain KAB03_01424 PF00206 Lyase KAB03_01424 PF10397 Adenylosuccinate lyase C-terminus KAB03_01425 PF00561 alpha/beta hydrolase fold KAB03_01426 PF07690 Major Facilitator Superfamily KAB03_01427 PF02627 Carboxymuconolactone decarboxylase family KAB03_01428 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KAB03_01428 PF00775 Dioxygenase KAB03_01429 PF00775 Dioxygenase KAB03_01430 PF01487 Type I 3-dehydroquinase KAB03_01431 PF05048 Periplasmic copper-binding protein (NosD) KAB03_01432 PF04966 Carbohydrate-selective porin, OprB family KAB03_01433 PF13360 PQQ-like domain KAB03_01433 PF01011 PQQ enzyme repeat KAB03_01435 PF04143 Sulphur transport KAB03_01437 PF00753 Metallo-beta-lactamase superfamily KAB03_01438 PF09339 IclR helix-turn-helix domain KAB03_01438 PF01614 Bacterial transcriptional regulator KAB03_01439 PF03466 LysR substrate binding domain KAB03_01439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01440 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_01440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_01443 PF00106 short chain dehydrogenase KAB03_01445 PF07690 Major Facilitator Superfamily KAB03_01447 PF01425 Amidase KAB03_01448 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01451 PF00355 Rieske [2Fe-2S] domain KAB03_01451 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB03_01454 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_01454 PF00175 Oxidoreductase NAD-binding domain KAB03_01455 PF01613 Flavin reductase like domain KAB03_01456 PF02311 AraC-like ligand binding domain KAB03_01456 PF12833 Helix-turn-helix domain KAB03_01457 PF01179 Copper amine oxidase, enzyme domain KAB03_01457 PF02727 Copper amine oxidase, N2 domain KAB03_01457 PF02728 Copper amine oxidase, N3 domain KAB03_01457 PF07833 Copper amine oxidase N-terminal domain KAB03_01459 PF00171 Aldehyde dehydrogenase family KAB03_01460 PF01804 Penicillin amidase KAB03_01461 PF12146 Serine aminopeptidase, S33 KAB03_01462 PF02803 Thiolase, C-terminal domain KAB03_01462 PF00108 Thiolase, N-terminal domain KAB03_01463 PF01144 Coenzyme A transferase KAB03_01464 PF01144 Coenzyme A transferase KAB03_01465 PF00775 Dioxygenase KAB03_01465 PF04444 Catechol dioxygenase N terminus KAB03_01466 PF02426 Muconolactone delta-isomerase KAB03_01467 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB03_01467 PF13378 Enolase C-terminal domain-like KAB03_01468 PF03466 LysR substrate binding domain KAB03_01468 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01470 PF00392 Bacterial regulatory proteins, gntR family KAB03_01470 PF07729 FCD domain KAB03_01471 PF00920 Dehydratase family KAB03_01472 PF07690 Major Facilitator Superfamily KAB03_01474 PF00171 Aldehyde dehydrogenase family KAB03_01478 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_01478 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_01478 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01480 PF06506 Propionate catabolism activator KAB03_01480 PF02954 Bacterial regulatory protein, Fis family KAB03_01480 PF00158 Sigma-54 interaction domain KAB03_01481 PF00501 AMP-binding enzyme KAB03_01481 PF13193 AMP-binding enzyme C-terminal domain KAB03_01482 PF04341 Protein of unknown function, DUF485 KAB03_01483 PF00474 Sodium:solute symporter family KAB03_01484 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_01484 PF00107 Zinc-binding dehydrogenase KAB03_01485 PF00171 Aldehyde dehydrogenase family KAB03_01487 PF00561 alpha/beta hydrolase fold KAB03_01488 PF06628 Catalase-related immune-responsive KAB03_01488 PF00199 Catalase KAB03_01491 PF07859 alpha/beta hydrolase fold KAB03_01492 PF01047 MarR family KAB03_01493 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB03_01493 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01494 PF00106 short chain dehydrogenase KAB03_01495 PF01872 RibD C-terminal domain KAB03_01496 PF00376 MerR family regulatory protein KAB03_01496 PF09278 MerR, DNA binding KAB03_01498 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01500 PF12706 Beta-lactamase superfamily domain KAB03_01501 PF00440 Bacterial regulatory proteins, tetR family KAB03_01501 PF08359 YsiA-like protein, C-terminal region KAB03_01503 PF00857 Isochorismatase family KAB03_01504 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01504 PF03466 LysR substrate binding domain KAB03_01505 PF07995 Glucose / Sorbosone dehydrogenase KAB03_01506 PF02254 TrkA-N domain KAB03_01506 PF00999 Sodium/hydrogen exchanger family KAB03_01508 PF07687 Peptidase dimerisation domain KAB03_01508 PF01546 Peptidase family M20/M25/M40 KAB03_01510 PF08479 POTRA domain, ShlB-type KAB03_01510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KAB03_01510 PF17287 POTRA domain KAB03_01511 PF13018 Extended Signal Peptide of Type V secretion system KAB03_01511 PF13332 Hemagglutinin repeat KAB03_01511 PF04829 Pre-toxin domain with VENN motif KAB03_01511 PF05860 haemagglutination activity domain KAB03_01512 PF13737 Transposase DDE domain KAB03_01516 PF07690 Major Facilitator Superfamily KAB03_01517 PF04909 Amidohydrolase KAB03_01520 PF08450 SMP-30/Gluconolactonase/LRE-like region KAB03_01522 PF03466 LysR substrate binding domain KAB03_01522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01526 PF07690 Major Facilitator Superfamily KAB03_01527 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB03_01527 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB03_01527 PF01842 ACT domain KAB03_01528 PF03737 Aldolase/RraA KAB03_01532 PF00529 HlyD membrane-fusion protein of T1SS KAB03_01532 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_01535 PF00171 Aldehyde dehydrogenase family KAB03_01536 PF00920 Dehydratase family KAB03_01538 PF03466 LysR substrate binding domain KAB03_01538 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01539 PF01370 NAD dependent epimerase/dehydratase family KAB03_01540 PF07690 Major Facilitator Superfamily KAB03_01541 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB03_01541 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB03_01542 PF06719 AraC-type transcriptional regulator N-terminus KAB03_01542 PF12833 Helix-turn-helix domain KAB03_01545 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_01545 PF00107 Zinc-binding dehydrogenase KAB03_01548 PF00005 ABC transporter KAB03_01552 PF14572 Phosphoribosyl synthetase-associated domain KAB03_01552 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB03_01553 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB03_01568 PF00196 Bacterial regulatory proteins, luxR family KAB03_01569 PF01425 Amidase KAB03_01570 PF13533 Biotin-lipoyl like KAB03_01571 PF07690 Major Facilitator Superfamily KAB03_01576 PF01975 Survival protein SurE KAB03_01578 PF04607 Region found in RelA / SpoT proteins KAB03_01578 PF13291 ACT domain KAB03_01578 PF02824 TGS domain KAB03_01581 PF13737 Transposase DDE domain KAB03_01590 PF12146 Serine aminopeptidase, S33 KAB03_01591 PF12833 Helix-turn-helix domain KAB03_01591 PF02311 AraC-like ligand binding domain KAB03_01593 PF00512 His Kinase A (phospho-acceptor) domain KAB03_01593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_01593 PF00672 HAMP domain KAB03_01593 PF16527 Two-component sensor protein CpxA, periplasmic domain KAB03_01594 PF00486 Transcriptional regulatory protein, C terminal KAB03_01594 PF00072 Response regulator receiver domain KAB03_01595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_01595 PF00529 HlyD membrane-fusion protein of T1SS KAB03_01596 PF00873 AcrB/AcrD/AcrF family KAB03_01597 PF02321 Outer membrane efflux protein KAB03_01598 PF12146 Serine aminopeptidase, S33 KAB03_01599 PF00743 Flavin-binding monooxygenase-like KAB03_01600 PF01593 Flavin containing amine oxidoreductase KAB03_01603 PF01266 FAD dependent oxidoreductase KAB03_01607 PF16970 Type-1 fimbrial protein, A KAB03_01610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB03_01610 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB03_01611 PF13953 PapC C-terminal domain KAB03_01611 PF00577 Outer membrane usher protein KAB03_01611 PF13954 PapC N-terminal domain KAB03_01612 PF00419 Fimbrial protein KAB03_01614 PF00107 Zinc-binding dehydrogenase KAB03_01614 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_01616 PF00199 Catalase KAB03_01619 PF13091 PLD-like domain KAB03_01623 PF01244 Membrane dipeptidase (Peptidase family M19) KAB03_01624 PF04055 Radical SAM superfamily KAB03_01624 PF13186 Iron-sulfur cluster-binding domain KAB03_01625 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KAB03_01626 PF03070 TENA/THI-4/PQQC family KAB03_01627 PF12706 Beta-lactamase superfamily domain KAB03_01628 PF13089 Polyphosphate kinase N-terminal domain KAB03_01628 PF02503 Polyphosphate kinase middle domain KAB03_01628 PF17941 Polyphosphate kinase C-terminal domain 1 KAB03_01628 PF13090 Polyphosphate kinase C-terminal domain 2 KAB03_01629 PF00149 Calcineurin-like phosphoesterase KAB03_01631 PF00550 Phosphopantetheine attachment site KAB03_01631 PF00857 Isochorismatase family KAB03_01632 PF00106 short chain dehydrogenase KAB03_01633 PF03459 TOBE domain KAB03_01633 PF00005 ABC transporter KAB03_01634 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01636 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01636 PF03459 TOBE domain KAB03_01637 PF00355 Rieske [2Fe-2S] domain KAB03_01637 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB03_01638 PF00866 Ring hydroxylating beta subunit KAB03_01639 PF00970 Oxidoreductase FAD-binding domain KAB03_01639 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_01639 PF00175 Oxidoreductase NAD-binding domain KAB03_01640 PF12833 Helix-turn-helix domain KAB03_01640 PF14525 AraC-binding-like domain KAB03_01642 PF01613 Flavin reductase like domain KAB03_01645 PF01738 Dienelactone hydrolase family KAB03_01646 PF07690 Major Facilitator Superfamily KAB03_01647 PF07690 Major Facilitator Superfamily KAB03_01648 PF06719 AraC-type transcriptional regulator N-terminus KAB03_01648 PF12833 Helix-turn-helix domain KAB03_01654 PF03466 LysR substrate binding domain KAB03_01654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01655 PF01144 Coenzyme A transferase KAB03_01656 PF01144 Coenzyme A transferase KAB03_01657 PF02667 Short chain fatty acid transporter KAB03_01658 PF00108 Thiolase, N-terminal domain KAB03_01658 PF02803 Thiolase, C-terminal domain KAB03_01659 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01659 PF03466 LysR substrate binding domain KAB03_01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01660 PF03466 LysR substrate binding domain KAB03_01663 PF10415 Fumarase C C-terminus KAB03_01663 PF00206 Lyase KAB03_01664 PF07715 TonB-dependent Receptor Plug Domain KAB03_01664 PF00593 TonB dependent receptor KAB03_01665 PF00083 Sugar (and other) transporter KAB03_01668 PF00005 ABC transporter KAB03_01669 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB03_01675 PF02525 Flavodoxin-like fold KAB03_01676 PF01638 HxlR-like helix-turn-helix KAB03_01677 PF06445 GyrI-like small molecule binding domain KAB03_01677 PF12833 Helix-turn-helix domain KAB03_01680 PF01925 Sulfite exporter TauE/SafE KAB03_01681 PF04273 Putative phosphatase (DUF442) KAB03_01681 PF00753 Metallo-beta-lactamase superfamily KAB03_01682 PF04273 Putative phosphatase (DUF442) KAB03_01682 PF00753 Metallo-beta-lactamase superfamily KAB03_01683 PF00158 Sigma-54 interaction domain KAB03_01683 PF02954 Bacterial regulatory protein, Fis family KAB03_01683 PF00072 Response regulator receiver domain KAB03_01684 PF01062 Bestrophin, RFP-TM, chloride channel KAB03_01685 PF00107 Zinc-binding dehydrogenase KAB03_01685 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_01686 PF00106 short chain dehydrogenase KAB03_01689 PF00106 short chain dehydrogenase KAB03_01690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB03_01691 PF02817 e3 binding domain KAB03_01691 PF00364 Biotin-requiring enzyme KAB03_01691 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB03_01692 PF02780 Transketolase, C-terminal domain KAB03_01692 PF02779 Transketolase, pyrimidine binding domain KAB03_01693 PF00676 Dehydrogenase E1 component KAB03_01694 PF04055 Radical SAM superfamily KAB03_01697 PF08448 PAS fold KAB03_01697 PF00990 Diguanylate cyclase, GGDEF domain KAB03_01698 PF01264 Chorismate synthase KAB03_01699 PF05175 Methyltransferase small domain KAB03_01700 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_01702 PF17862 AAA+ lid domain KAB03_01702 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_01702 PF01434 Peptidase family M41 KAB03_01704 PF05166 YcgL domain KAB03_01708 PF01612 3'-5' exonuclease KAB03_01708 PF00570 HRDC domain KAB03_01709 PF02132 RecR protein KAB03_01709 PF13662 Toprim domain KAB03_01710 PF02575 YbaB/EbfC DNA-binding family KAB03_01712 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB03_01713 PF00561 alpha/beta hydrolase fold KAB03_01714 PF08241 Methyltransferase domain KAB03_01720 PF01230 HIT domain KAB03_01727 PF00005 ABC transporter KAB03_01728 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_01730 PF02684 Lipid-A-disaccharide synthetase KAB03_01731 PF00593 TonB dependent receptor KAB03_01731 PF07715 TonB-dependent Receptor Plug Domain KAB03_01735 PF01925 Sulfite exporter TauE/SafE KAB03_01736 PF00793 DAHP synthetase I family KAB03_01737 PF02654 Cobalamin-5-phosphate synthase KAB03_01740 PF02277 Phosphoribosyltransferase KAB03_01741 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KAB03_01743 PF13419 Haloacid dehalogenase-like hydrolase KAB03_01748 PF00593 TonB dependent receptor KAB03_01748 PF07715 TonB-dependent Receptor Plug Domain KAB03_01751 PF04183 IucA / IucC family KAB03_01751 PF06276 Ferric iron reductase FhuF-like transporter KAB03_01752 PF06276 Ferric iron reductase FhuF-like transporter KAB03_01752 PF04183 IucA / IucC family KAB03_01753 PF07690 Major Facilitator Superfamily KAB03_01754 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB03_01755 PF04183 IucA / IucC family KAB03_01755 PF06276 Ferric iron reductase FhuF-like transporter KAB03_01756 PF04073 Aminoacyl-tRNA editing domain KAB03_01758 PF03109 ABC1 family KAB03_01759 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01759 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_01759 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_01760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01760 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_01760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_01761 PF00487 Fatty acid desaturase KAB03_01762 PF12833 Helix-turn-helix domain KAB03_01762 PF12852 Cupin KAB03_01763 PF09312 SurA N-terminal domain KAB03_01763 PF00639 PPIC-type PPIASE domain KAB03_01764 PF00216 Bacterial DNA-binding protein KAB03_01767 PF02082 Transcriptional regulator KAB03_01768 PF00266 Aminotransferase class-V KAB03_01769 PF01592 NifU-like N terminal domain KAB03_01770 PF01521 Iron-sulphur cluster biosynthesis KAB03_01771 PF07743 HSCB C-terminal oligomerisation domain KAB03_01771 PF00226 DnaJ domain KAB03_01772 PF00012 Hsp70 protein KAB03_01773 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_01774 PF00211 Adenylate and Guanylate cyclase catalytic domain KAB03_01776 PF00271 Helicase conserved C-terminal domain KAB03_01776 PF02559 CarD-like/TRCF domain KAB03_01776 PF00270 DEAD/DEAH box helicase KAB03_01776 PF03461 TRCF domain KAB03_01776 PF17757 UvrB interaction domain KAB03_01780 PF03737 Aldolase/RraA KAB03_01781 PF13460 NAD(P)H-binding KAB03_01782 PF01649 Ribosomal protein S20 KAB03_01784 PF00459 Inositol monophosphatase family KAB03_01787 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB03_01787 PF00005 ABC transporter KAB03_01788 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01789 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01790 PF01432 Peptidase family M3 KAB03_01794 PF07715 TonB-dependent Receptor Plug Domain KAB03_01794 PF00593 TonB dependent receptor KAB03_01795 PF13737 Transposase DDE domain KAB03_01797 PF01618 MotA/TolQ/ExbB proton channel family KAB03_01798 PF02472 Biopolymer transport protein ExbD/TolR KAB03_01799 PF02472 Biopolymer transport protein ExbD/TolR KAB03_01801 PF01274 Malate synthase KAB03_01802 PF03969 AFG1-like ATPase KAB03_01804 PF00743 Flavin-binding monooxygenase-like KAB03_01806 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB03_01808 PF00216 Bacterial DNA-binding protein KAB03_01809 PF00575 S1 RNA binding domain KAB03_01810 PF02224 Cytidylate kinase KAB03_01812 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB03_01814 PF03167 Uracil DNA glycosylase superfamily KAB03_01816 PF03934 Type II secretion system (T2SS), protein K KAB03_01817 PF11612 Type II secretion system (T2SS), protein J KAB03_01817 PF07963 Prokaryotic N-terminal methylation motif KAB03_01818 PF07963 Prokaryotic N-terminal methylation motif KAB03_01818 PF02501 Type II secretion system (T2SS), protein I KAB03_01821 PF01026 TatD related DNase KAB03_01823 PF09115 DNA polymerase III, delta subunit, C terminal KAB03_01824 PF02348 Cytidylyltransferase KAB03_01825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAB03_01826 PF00664 ABC transporter transmembrane region KAB03_01826 PF00005 ABC transporter KAB03_01828 PF01618 MotA/TolQ/ExbB proton channel family KAB03_01829 PF17762 HTH domain found in ParB protein KAB03_01829 PF02195 ParB-like nuclease domain KAB03_01830 PF13614 AAA domain KAB03_01831 PF02527 rRNA small subunit methyltransferase G KAB03_01832 PF00483 Nucleotidyl transferase KAB03_01833 PF01636 Phosphotransferase enzyme family KAB03_01834 PF04453 LPS transport system D KAB03_01834 PF03968 OstA-like protein KAB03_01835 PF00639 PPIC-type PPIASE domain KAB03_01835 PF09312 SurA N-terminal domain KAB03_01836 PF01116 Fructose-bisphosphate aldolase class-II KAB03_01838 PF00162 Phosphoglycerate kinase KAB03_01840 PF02545 Maf-like protein KAB03_01841 PF08007 Cupin superfamily protein KAB03_01846 PF00375 Sodium:dicarboxylate symporter family KAB03_01847 PF06912 Protein of unknown function (DUF1275) KAB03_01848 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KAB03_01849 PF00664 ABC transporter transmembrane region KAB03_01849 PF00005 ABC transporter KAB03_01851 PF12833 Helix-turn-helix domain KAB03_01851 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB03_01852 PF01597 Glycine cleavage H-protein KAB03_01853 PF02146 Sir2 family KAB03_01854 PF00474 Sodium:solute symporter family KAB03_01855 PF01037 Lrp/AsnC ligand binding domain KAB03_01856 PF01619 Proline dehydrogenase KAB03_01856 PF14850 DNA-binding domain of Proline dehydrogenase KAB03_01856 PF00171 Aldehyde dehydrogenase family KAB03_01856 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KAB03_01857 PF04229 GrpB protein KAB03_01858 PF05958 tRNA (Uracil-5-)-methyltransferase KAB03_01860 PF09992 Phosphodiester glycosidase KAB03_01862 PF04264 YceI-like domain KAB03_01864 PF02779 Transketolase, pyrimidine binding domain KAB03_01864 PF00456 Transketolase, thiamine diphosphate binding domain KAB03_01864 PF02780 Transketolase, C-terminal domain KAB03_01865 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAB03_01865 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAB03_01865 PF02772 S-adenosylmethionine synthetase, central domain KAB03_01869 PF00905 Penicillin binding protein transpeptidase domain KAB03_01872 PF02075 Crossover junction endodeoxyribonuclease RuvC KAB03_01873 PF03853 YjeF-related protein N-terminus KAB03_01873 PF01256 Carbohydrate kinase KAB03_01874 PF08331 Domain of unknown function (DUF1730) KAB03_01875 PF06968 Biotin and Thiamin Synthesis associated domain KAB03_01875 PF04055 Radical SAM superfamily KAB03_01878 PF16970 Type-1 fimbrial protein, A KAB03_01879 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB03_01879 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB03_01880 PF00577 Outer membrane usher protein KAB03_01880 PF13954 PapC N-terminal domain KAB03_01880 PF13953 PapC C-terminal domain KAB03_01884 PF00892 EamA-like transporter family KAB03_01886 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB03_01888 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01888 PF03466 LysR substrate binding domain KAB03_01893 PF00440 Bacterial regulatory proteins, tetR family KAB03_01895 PF01709 Transcriptional regulator KAB03_01896 PF01037 Lrp/AsnC ligand binding domain KAB03_01898 PF00005 ABC transporter KAB03_01899 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01900 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01903 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01903 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_01905 PF00296 Luciferase-like monooxygenase KAB03_01906 PF03180 NLPA lipoprotein KAB03_01907 PF03180 NLPA lipoprotein KAB03_01908 PF00005 ABC transporter KAB03_01908 PF09383 NIL domain KAB03_01909 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01910 PF06071 Protein of unknown function (DUF933) KAB03_01910 PF01926 50S ribosome-binding GTPase KAB03_01915 PF03591 AzlC protein KAB03_01916 PF05437 Branched-chain amino acid transport protein (AzlD) KAB03_01917 PF13737 Transposase DDE domain KAB03_01919 PF02222 ATP-grasp domain KAB03_01920 PF08335 GlnD PII-uridylyltransferase KAB03_01920 PF01909 Nucleotidyltransferase domain KAB03_01920 PF01966 HD domain KAB03_01921 PF00155 Aminotransferase class I and II KAB03_01923 PF12833 Helix-turn-helix domain KAB03_01923 PF12852 Cupin KAB03_01924 PF00255 Glutathione peroxidase KAB03_01925 PF01641 SelR domain KAB03_01926 PF00155 Aminotransferase class I and II KAB03_01927 PF00375 Sodium:dicarboxylate symporter family KAB03_01928 PF00710 Asparaginase, N-terminal KAB03_01928 PF17763 Glutaminase/Asparaginase C-terminal domain KAB03_01929 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAB03_01929 PF14579 Helix-hairpin-helix motif KAB03_01929 PF02811 PHP domain KAB03_01929 PF01336 OB-fold nucleic acid binding domain KAB03_01929 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAB03_01930 PF00588 SpoU rRNA Methylase family KAB03_01931 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_01934 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_01934 PF13192 Thioredoxin domain KAB03_01937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01937 PF03466 LysR substrate binding domain KAB03_01938 PF01758 Sodium Bile acid symporter family KAB03_01939 PF01022 Bacterial regulatory protein, arsR family KAB03_01940 PF03960 ArsC family KAB03_01942 PF01979 Amidohydrolase family KAB03_01942 PF13382 Adenine deaminase C-terminal domain KAB03_01944 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01944 PF03466 LysR substrate binding domain KAB03_01946 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB03_01947 PF01177 Asp/Glu/Hydantoin racemase KAB03_01948 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KAB03_01949 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01950 PF00005 ABC transporter KAB03_01951 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB03_01954 PF00083 Sugar (and other) transporter KAB03_01955 PF00296 Luciferase-like monooxygenase KAB03_01956 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB03_01956 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_01956 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_01958 PF01654 Cytochrome bd terminal oxidase subunit I KAB03_01959 PF02322 Cytochrome bd terminal oxidase subunit II KAB03_01961 PF00155 Aminotransferase class I and II KAB03_01961 PF00392 Bacterial regulatory proteins, gntR family KAB03_01962 PF03466 LysR substrate binding domain KAB03_01962 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01965 PF00698 Acyl transferase domain KAB03_01966 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KAB03_01968 PF01039 Carboxyl transferase domain KAB03_01969 PF06857 Malonate decarboxylase delta subunit (MdcD) KAB03_01970 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KAB03_01971 PF16957 Malonate decarboxylase, alpha subunit, transporter KAB03_01972 PF07690 Major Facilitator Superfamily KAB03_01975 PF00392 Bacterial regulatory proteins, gntR family KAB03_01975 PF00155 Aminotransferase class I and II KAB03_01976 PF04172 LrgB-like family KAB03_01977 PF03788 LrgA family KAB03_01978 PF03466 LysR substrate binding domain KAB03_01978 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01979 PF02798 Glutathione S-transferase, N-terminal domain KAB03_01979 PF14834 Glutathione S-transferase, C-terminal domain KAB03_01980 PF02798 Glutathione S-transferase, N-terminal domain KAB03_01981 PF03466 LysR substrate binding domain KAB03_01981 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01983 PF00581 Rhodanese-like domain KAB03_01984 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_01986 PF00266 Aminotransferase class-V KAB03_01987 PF01810 LysE type translocator KAB03_01988 PF03466 LysR substrate binding domain KAB03_01988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_01989 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB03_01990 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB03_01991 PF00005 ABC transporter KAB03_01992 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01993 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_01995 PF00072 Response regulator receiver domain KAB03_01996 PF09308 LuxQ, periplasmic KAB03_01996 PF00512 His Kinase A (phospho-acceptor) domain KAB03_01996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_01996 PF00072 Response regulator receiver domain KAB03_01998 PF13404 AsnC-type helix-turn-helix domain KAB03_01998 PF01037 Lrp/AsnC ligand binding domain KAB03_02000 PF00717 Peptidase S24-like KAB03_02003 PF13737 Transposase DDE domain KAB03_02005 PF13737 Transposase DDE domain KAB03_02007 PF13737 Transposase DDE domain KAB03_02009 PF00199 Catalase KAB03_02009 PF18011 C-terminal domain found in long catalases KAB03_02009 PF06628 Catalase-related immune-responsive KAB03_02011 PF02464 Competence-damaged protein KAB03_02011 PF00994 Probable molybdopterin binding domain KAB03_02011 PF18146 Damage-inducible protein CinA KH domain KAB03_02019 PF03466 LysR substrate binding domain KAB03_02019 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02023 PF00501 AMP-binding enzyme KAB03_02023 PF13193 AMP-binding enzyme C-terminal domain KAB03_02024 PF00440 Bacterial regulatory proteins, tetR family KAB03_02025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02025 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02026 PF01039 Carboxyl transferase domain KAB03_02027 PF00378 Enoyl-CoA hydratase/isomerase KAB03_02028 PF00289 Biotin carboxylase, N-terminal domain KAB03_02028 PF02785 Biotin carboxylase C-terminal domain KAB03_02028 PF00364 Biotin-requiring enzyme KAB03_02028 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB03_02029 PF00682 HMGL-like KAB03_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02030 PF03466 LysR substrate binding domain KAB03_02033 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB03_02033 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_02033 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02033 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02035 PF07690 Major Facilitator Superfamily KAB03_02037 PF01144 Coenzyme A transferase KAB03_02038 PF01144 Coenzyme A transferase KAB03_02039 PF07690 Major Facilitator Superfamily KAB03_02041 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02041 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_02041 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02042 PF00378 Enoyl-CoA hydratase/isomerase KAB03_02044 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB03_02044 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB03_02044 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB03_02045 PF02803 Thiolase, C-terminal domain KAB03_02045 PF00108 Thiolase, N-terminal domain KAB03_02046 PF09339 IclR helix-turn-helix domain KAB03_02047 PF07690 Major Facilitator Superfamily KAB03_02048 PF03060 Nitronate monooxygenase KAB03_02049 PF00378 Enoyl-CoA hydratase/isomerase KAB03_02050 PF09339 IclR helix-turn-helix domain KAB03_02051 PF02515 CoA-transferase family III KAB03_02052 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02052 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_02052 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02053 PF07690 Major Facilitator Superfamily KAB03_02054 PF13419 Haloacid dehalogenase-like hydrolase KAB03_02055 PF00266 Aminotransferase class-V KAB03_02056 PF01266 FAD dependent oxidoreductase KAB03_02057 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02058 PF08402 TOBE domain KAB03_02058 PF00005 ABC transporter KAB03_02060 PF07702 UTRA domain KAB03_02060 PF00392 Bacterial regulatory proteins, gntR family KAB03_02061 PF01494 FAD binding domain KAB03_02062 PF01614 Bacterial transcriptional regulator KAB03_02062 PF09339 IclR helix-turn-helix domain KAB03_02063 PF02525 Flavodoxin-like fold KAB03_02064 PF03466 LysR substrate binding domain KAB03_02064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02065 PF02627 Carboxymuconolactone decarboxylase family KAB03_02066 PF00171 Aldehyde dehydrogenase family KAB03_02068 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB03_02069 PF00171 Aldehyde dehydrogenase family KAB03_02070 PF13737 Transposase DDE domain KAB03_02071 PF00171 Aldehyde dehydrogenase family KAB03_02072 PF00296 Luciferase-like monooxygenase KAB03_02073 PF01613 Flavin reductase like domain KAB03_02074 PF12697 Alpha/beta hydrolase family KAB03_02078 PF01292 Prokaryotic cytochrome b561 KAB03_02079 PF00199 Catalase KAB03_02084 PF13737 Transposase DDE domain KAB03_02088 PF03061 Thioesterase superfamily KAB03_02089 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_02090 PF08223 PaaX-like protein C-terminal domain KAB03_02090 PF07848 PaaX-like protein KAB03_02091 PF14535 AMP-binding enzyme C-terminal domain KAB03_02091 PF00501 AMP-binding enzyme KAB03_02092 PF00108 Thiolase, N-terminal domain KAB03_02092 PF02803 Thiolase, C-terminal domain KAB03_02093 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB03_02093 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB03_02093 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB03_02094 PF00378 Enoyl-CoA hydratase/isomerase KAB03_02095 PF00378 Enoyl-CoA hydratase/isomerase KAB03_02096 PF00970 Oxidoreductase FAD-binding domain KAB03_02096 PF00175 Oxidoreductase NAD-binding domain KAB03_02096 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_02097 PF01883 Iron-sulfur cluster assembly protein KAB03_02098 PF05138 Phenylacetic acid catabolic protein KAB03_02099 PF06243 Phenylacetic acid degradation B KAB03_02100 PF05138 Phenylacetic acid catabolic protein KAB03_02101 PF00171 Aldehyde dehydrogenase family KAB03_02101 PF01575 MaoC like domain KAB03_02102 PF03315 Serine dehydratase beta chain KAB03_02102 PF03313 Serine dehydratase alpha chain KAB03_02103 PF13520 Amino acid permease KAB03_02104 PF00171 Aldehyde dehydrogenase family KAB03_02105 PF00083 Sugar (and other) transporter KAB03_02107 PF04324 BFD-like [2Fe-2S] binding domain KAB03_02107 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02109 PF01266 FAD dependent oxidoreductase KAB03_02110 PF05544 Proline racemase KAB03_02111 PF00392 Bacterial regulatory proteins, gntR family KAB03_02113 PF00701 Dihydrodipicolinate synthetase family KAB03_02116 PF00376 MerR family regulatory protein KAB03_02116 PF09278 MerR, DNA binding KAB03_02120 PF02677 Epoxyqueuosine reductase QueH KAB03_02123 PF07690 Major Facilitator Superfamily KAB03_02124 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB03_02126 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02126 PF03466 LysR substrate binding domain KAB03_02132 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_02132 PF17871 AAA lid domain KAB03_02132 PF07724 AAA domain (Cdc48 subfamily) KAB03_02132 PF10431 C-terminal, D2-small domain, of ClpB protein KAB03_02133 PF13737 Transposase DDE domain KAB03_02136 PF00691 OmpA family KAB03_02136 PF01389 OmpA-like transmembrane domain KAB03_02149 PF00005 ABC transporter KAB03_02150 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB03_02151 PF01425 Amidase KAB03_02152 PF01402 Ribbon-helix-helix protein, copG family KAB03_02152 PF08753 NikR C terminal nickel binding domain KAB03_02155 PF01638 HxlR-like helix-turn-helix KAB03_02156 PF02525 Flavodoxin-like fold KAB03_02157 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB03_02157 PF00289 Biotin carboxylase, N-terminal domain KAB03_02157 PF02785 Biotin carboxylase C-terminal domain KAB03_02160 PF13823 Alcohol dehydrogenase GroES-associated KAB03_02160 PF00107 Zinc-binding dehydrogenase KAB03_02160 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_02162 PF00440 Bacterial regulatory proteins, tetR family KAB03_02167 PF00654 Voltage gated chloride channel KAB03_02168 PF00364 Biotin-requiring enzyme KAB03_02168 PF00289 Biotin carboxylase, N-terminal domain KAB03_02168 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB03_02168 PF02785 Biotin carboxylase C-terminal domain KAB03_02170 PF07286 Protein of unknown function (DUF1445) KAB03_02171 PF03746 LamB/YcsF family KAB03_02172 PF01566 Natural resistance-associated macrophage protein KAB03_02173 PF03466 LysR substrate binding domain KAB03_02173 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02176 PF05593 RHS Repeat KAB03_02176 PF03527 RHS protein KAB03_02176 PF14220 Domain of unknown function (DUF4329) KAB03_02177 PF16671 Actin cross-linking domain KAB03_02177 PF04717 Type VI secretion system, phage-baseplate injector KAB03_02179 PF13419 Haloacid dehalogenase-like hydrolase KAB03_02182 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB03_02182 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB03_02186 PF07690 Major Facilitator Superfamily KAB03_02188 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB03_02189 PF00990 Diguanylate cyclase, GGDEF domain KAB03_02189 PF03707 Bacterial signalling protein N terminal repeat KAB03_02189 PF00563 EAL domain KAB03_02190 PF00892 EamA-like transporter family KAB03_02191 PF01037 Lrp/AsnC ligand binding domain KAB03_02192 PF05188 MutS domain II KAB03_02192 PF00488 MutS domain V KAB03_02192 PF05190 MutS family domain IV KAB03_02192 PF05192 MutS domain III KAB03_02192 PF01624 MutS domain I KAB03_02194 PF00037 4Fe-4S binding domain KAB03_02194 PF11953 Domain of unknown function (DUF3470) KAB03_02196 PF01596 O-methyltransferase KAB03_02198 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_02199 PF01205 Uncharacterized protein family UPF0029 KAB03_02201 PF00005 ABC transporter KAB03_02201 PF00664 ABC transporter transmembrane region KAB03_02201 PF03412 Peptidase C39 family KAB03_02202 PF02321 Outer membrane efflux protein KAB03_02203 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAB03_02203 PF00005 ABC transporter KAB03_02204 PF03968 OstA-like protein KAB03_02207 PF01380 SIS domain KAB03_02207 PF00571 CBS domain KAB03_02208 PF09190 DALR domain KAB03_02208 PF01406 tRNA synthetases class I (C) catalytic domain KAB03_02210 PF13737 Transposase DDE domain KAB03_02212 PF13737 Transposase DDE domain KAB03_02216 PF01638 HxlR-like helix-turn-helix KAB03_02217 PF07690 Major Facilitator Superfamily KAB03_02222 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB03_02222 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB03_02224 PF00313 'Cold-shock' DNA-binding domain KAB03_02225 PF01810 LysE type translocator KAB03_02232 PF02601 Exonuclease VII, large subunit KAB03_02232 PF13742 OB-fold nucleic acid binding domain KAB03_02239 PF00376 MerR family regulatory protein KAB03_02239 PF09278 MerR, DNA binding KAB03_02240 PF00403 Heavy-metal-associated domain KAB03_02242 PF03466 LysR substrate binding domain KAB03_02242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02243 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB03_02243 PF00355 Rieske [2Fe-2S] domain KAB03_02244 PF00866 Ring hydroxylating beta subunit KAB03_02245 PF00175 Oxidoreductase NAD-binding domain KAB03_02245 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_02245 PF00970 Oxidoreductase FAD-binding domain KAB03_02246 PF00106 short chain dehydrogenase KAB03_02247 PF03594 Benzoate membrane transport protein KAB03_02248 PF07690 Major Facilitator Superfamily KAB03_02250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAB03_02250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAB03_02251 PF00270 DEAD/DEAH box helicase KAB03_02251 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KAB03_02251 PF00271 Helicase conserved C-terminal domain KAB03_02251 PF04408 Helicase associated domain (HA2) KAB03_02251 PF11898 Domain of unknown function (DUF3418) KAB03_02252 PF00578 AhpC/TSA family KAB03_02252 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB03_02256 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02256 PF13192 Thioredoxin domain KAB03_02258 PF02798 Glutathione S-transferase, N-terminal domain KAB03_02258 PF00043 Glutathione S-transferase, C-terminal domain KAB03_02260 PF02390 Putative methyltransferase KAB03_02261 PF13417 Glutathione S-transferase, N-terminal domain KAB03_02261 PF00043 Glutathione S-transferase, C-terminal domain KAB03_02263 PF00691 OmpA family KAB03_02263 PF13488 Glycine zipper KAB03_02264 PF01979 Amidohydrolase family KAB03_02265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB03_02265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB03_02267 PF01170 Putative RNA methylase family UPF0020 KAB03_02267 PF02926 THUMP domain KAB03_02267 PF10672 S-adenosylmethionine-dependent methyltransferase KAB03_02270 PF02861 Clp amino terminal domain, pathogenicity island component KAB03_02270 PF17871 AAA lid domain KAB03_02270 PF10431 C-terminal, D2-small domain, of ClpB protein KAB03_02270 PF07724 AAA domain (Cdc48 subfamily) KAB03_02270 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_02273 PF02566 OsmC-like protein KAB03_02274 PF13545 Crp-like helix-turn-helix domain KAB03_02274 PF00027 Cyclic nucleotide-binding domain KAB03_02277 PF00248 Aldo/keto reductase family KAB03_02280 PF00709 Adenylosuccinate synthetase KAB03_02281 PF13393 Histidyl-tRNA synthetase KAB03_02282 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB03_02282 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB03_02283 PF02272 DHHA1 domain KAB03_02283 PF01411 tRNA synthetases class II (A) KAB03_02283 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB03_02284 PF00696 Amino acid kinase family KAB03_02284 PF01842 ACT domain KAB03_02284 PF13840 ACT domain KAB03_02285 PF02599 Global regulator protein family KAB03_02286 PF01351 Ribonuclease HII KAB03_02288 PF01292 Prokaryotic cytochrome b561 KAB03_02289 PF00962 Adenosine/AMP deaminase KAB03_02290 PF00860 Permease family KAB03_02292 PF00743 Flavin-binding monooxygenase-like KAB03_02293 PF13737 Transposase DDE domain KAB03_02294 PF00106 short chain dehydrogenase KAB03_02296 PF02678 Pirin KAB03_02296 PF17954 Quercetinase C-terminal cupin domain KAB03_02297 PF00440 Bacterial regulatory proteins, tetR family KAB03_02297 PF17932 Tetracyclin repressor-like, C-terminal domain KAB03_02298 PF13610 DDE domain KAB03_02299 PF01636 Phosphotransferase enzyme family KAB03_02300 PF13610 DDE domain KAB03_02301 PF02796 Helix-turn-helix domain of resolvase KAB03_02301 PF00239 Resolvase, N terminal domain KAB03_02302 PF01526 Tn3 transposase DDE domain KAB03_02302 PF13700 Domain of unknown function (DUF4158) KAB03_02304 PF00239 Resolvase, N terminal domain KAB03_02304 PF02796 Helix-turn-helix domain of resolvase KAB03_02305 PF13610 DDE domain KAB03_02308 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02308 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB03_02309 PF00764 Arginosuccinate synthase KAB03_02310 PF00563 EAL domain KAB03_02310 PF01590 GAF domain KAB03_02310 PF00990 Diguanylate cyclase, GGDEF domain KAB03_02310 PF00360 Phytochrome region KAB03_02311 PF01979 Amidohydrolase family KAB03_02312 PF00929 Exonuclease KAB03_02314 PF00593 TonB dependent receptor KAB03_02314 PF07715 TonB-dependent Receptor Plug Domain KAB03_02315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB03_02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02316 PF00005 ABC transporter KAB03_02316 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB03_02317 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02317 PF12911 N-terminal TM domain of oligopeptide transport permease C KAB03_02318 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02319 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAB03_02320 PF01476 LysM domain KAB03_02320 PF01464 Transglycosylase SLT domain KAB03_02320 PF01476 LysM domain KAB03_02320 PF01464 Transglycosylase SLT domain KAB03_02321 PF00929 Exonuclease KAB03_02323 PF00293 NUDIX domain KAB03_02323 PF09297 NADH pyrophosphatase zinc ribbon domain KAB03_02325 PF04972 BON domain KAB03_02326 PF02021 Uncharacterised protein family UPF0102 KAB03_02327 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB03_02329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02329 PF03466 LysR substrate binding domain KAB03_02330 PF01810 LysE type translocator KAB03_02332 PF13411 MerR HTH family regulatory protein KAB03_02334 PF01494 FAD binding domain KAB03_02335 PF01494 FAD binding domain KAB03_02336 PF00557 Metallopeptidase family M24 KAB03_02336 PF05195 Aminopeptidase P, N-terminal domain KAB03_02343 PF08019 Phosphoethanolamine transferase EptA/EptB KAB03_02343 PF00884 Sulfatase KAB03_02353 PF01551 Peptidase family M23 KAB03_02353 PF08525 Opacity-associated protein A N-terminal motif KAB03_02353 PF01476 LysM domain KAB03_02391 PF01555 DNA methylase KAB03_02397 PF12161 HsdM N-terminal domain KAB03_02397 PF02384 N-6 DNA Methylase KAB03_02411 PF01645 Conserved region in glutamate synthase KAB03_02414 PF01565 FAD binding domain KAB03_02414 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAB03_02415 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB03_02417 PF00465 Iron-containing alcohol dehydrogenase KAB03_02418 PF03061 Thioesterase superfamily KAB03_02419 PF04185 Phosphoesterase family KAB03_02419 PF05506 Domain of unknown function (DUF756) KAB03_02421 PF12170 DNA polymerase III tau subunit V interacting with alpha KAB03_02421 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KAB03_02421 PF12169 DNA polymerase III subunits gamma and tau domain III KAB03_02422 PF07690 Major Facilitator Superfamily KAB03_02427 PF02803 Thiolase, C-terminal domain KAB03_02427 PF00108 Thiolase, N-terminal domain KAB03_02429 PF03466 LysR substrate binding domain KAB03_02429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02431 PF01810 LysE type translocator KAB03_02432 PF01037 Lrp/AsnC ligand binding domain KAB03_02433 PF03594 Benzoate membrane transport protein KAB03_02434 PF02308 MgtC family KAB03_02435 PF00689 Cation transporting ATPase, C-terminus KAB03_02435 PF00690 Cation transporter/ATPase, N-terminus KAB03_02440 PF00582 Universal stress protein family KAB03_02441 PF12848 ABC transporter KAB03_02441 PF00005 ABC transporter KAB03_02445 PF00593 TonB dependent receptor KAB03_02445 PF07715 TonB-dependent Receptor Plug Domain KAB03_02453 PF00924 Mechanosensitive ion channel KAB03_02454 PF07715 TonB-dependent Receptor Plug Domain KAB03_02454 PF00593 TonB dependent receptor KAB03_02455 PF00440 Bacterial regulatory proteins, tetR family KAB03_02457 PF01037 Lrp/AsnC ligand binding domain KAB03_02458 PF01817 Chorismate mutase type II KAB03_02463 PF00106 short chain dehydrogenase KAB03_02465 PF11940 Domain of unknown function (DUF3458) Ig-like fold KAB03_02465 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KAB03_02465 PF01433 Peptidase family M1 domain KAB03_02468 PF02110 Hydroxyethylthiazole kinase family KAB03_02469 PF06445 GyrI-like small molecule binding domain KAB03_02471 PF14493 Helix-turn-helix domain KAB03_02471 PF05970 PIF1-like helicase KAB03_02472 PF00465 Iron-containing alcohol dehydrogenase KAB03_02475 PF00171 Aldehyde dehydrogenase family KAB03_02476 PF13520 Amino acid permease KAB03_02477 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KAB03_02478 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KAB03_02479 PF00958 GMP synthase C terminal domain KAB03_02479 PF00117 Glutamine amidotransferase class-I KAB03_02479 PF02540 NAD synthase KAB03_02480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAB03_02480 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB03_02481 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB03_02482 PF00149 Calcineurin-like phosphoesterase KAB03_02484 PF00881 Nitroreductase family KAB03_02486 PF17209 Hfq protein KAB03_02488 PF08676 MutL C terminal dimerisation domain KAB03_02488 PF01119 DNA mismatch repair protein, C-terminal domain KAB03_02489 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAB03_02490 PF01479 S4 domain KAB03_02490 PF00849 RNA pseudouridylate synthase KAB03_02493 PF00849 RNA pseudouridylate synthase KAB03_02493 PF01479 S4 domain KAB03_02495 PF04284 Protein of unknown function (DUF441) KAB03_02496 PF03466 LysR substrate binding domain KAB03_02496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02499 PF07690 Major Facilitator Superfamily KAB03_02500 PF00027 Cyclic nucleotide-binding domain KAB03_02500 PF00520 Ion transport protein KAB03_02502 PF11791 Aconitate B N-terminal domain KAB03_02502 PF00330 Aconitase family (aconitate hydratase) KAB03_02502 PF06434 Aconitate hydratase 2 N-terminus KAB03_02505 PF07244 Surface antigen variable number repeat KAB03_02505 PF01103 Surface antigen KAB03_02505 PF17243 POTRA domain TamA domain 1 KAB03_02506 PF07690 Major Facilitator Superfamily KAB03_02507 PF03232 Ubiquinone biosynthesis protein COQ7 KAB03_02509 PF00120 Glutamine synthetase, catalytic domain KAB03_02510 PF00486 Transcriptional regulatory protein, C terminal KAB03_02510 PF00072 Response regulator receiver domain KAB03_02511 PF02702 Osmosensitive K+ channel His kinase sensor domain KAB03_02511 PF13493 Domain of unknown function (DUF4118) KAB03_02511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_02511 PF00512 His Kinase A (phospho-acceptor) domain KAB03_02512 PF02669 K+-transporting ATPase, c chain KAB03_02514 PF03814 Potassium-transporting ATPase A subunit KAB03_02517 PF03109 ABC1 family KAB03_02518 PF00899 ThiF family KAB03_02519 PF01613 Flavin reductase like domain KAB03_02520 PF00501 AMP-binding enzyme KAB03_02520 PF13193 AMP-binding enzyme C-terminal domain KAB03_02521 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02521 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_02521 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02522 PF00106 short chain dehydrogenase KAB03_02523 PF12833 Helix-turn-helix domain KAB03_02524 PF09084 NMT1/THI5 like KAB03_02525 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02526 PF17827 PrmC N-terminal domain KAB03_02526 PF13847 Methyltransferase domain KAB03_02527 PF03462 PCRF domain KAB03_02527 PF00472 RF-1 domain KAB03_02529 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02529 PF03466 LysR substrate binding domain KAB03_02532 PF00296 Luciferase-like monooxygenase KAB03_02534 PF13994 PgaD-like protein KAB03_02535 PF00535 Glycosyl transferase family 2 KAB03_02536 PF01522 Polysaccharide deacetylase KAB03_02536 PF14883 Hypothetical glycosyl hydrolase family 13 KAB03_02538 PF13737 Transposase DDE domain KAB03_02540 PF03618 Kinase/pyrophosphorylase KAB03_02541 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAB03_02541 PF00391 PEP-utilising enzyme, mobile domain KAB03_02541 PF02896 PEP-utilising enzyme, TIM barrel domain KAB03_02543 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAB03_02543 PF06481 COX Aromatic Rich Motif KAB03_02544 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAB03_02545 PF00510 Cytochrome c oxidase subunit III KAB03_02546 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KAB03_02547 PF01040 UbiA prenyltransferase family KAB03_02548 PF01250 Ribosomal protein S6 KAB03_02549 PF01084 Ribosomal protein S18 KAB03_02550 PF03948 Ribosomal protein L9, C-terminal domain KAB03_02550 PF01281 Ribosomal protein L9, N-terminal domain KAB03_02551 PF00772 DnaB-like helicase N terminal domain KAB03_02551 PF03796 DnaB-like helicase C terminal domain KAB03_02552 PF01168 Alanine racemase, N-terminal domain KAB03_02552 PF00842 Alanine racemase, C-terminal domain KAB03_02554 PF01841 Transglutaminase-like superfamily KAB03_02554 PF08379 Bacterial transglutaminase-like N-terminal region KAB03_02556 PF14403 Circularly permuted ATP-grasp type 2 KAB03_02558 PF01134 Glucose inhibited division protein A KAB03_02558 PF13932 GidA associated domain KAB03_02562 PF02954 Bacterial regulatory protein, Fis family KAB03_02563 PF01808 AICARFT/IMPCHase bienzyme KAB03_02563 PF02142 MGS-like domain KAB03_02564 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAB03_02564 PF02843 Phosphoribosylglycinamide synthetase, C domain KAB03_02564 PF02844 Phosphoribosylglycinamide synthetase, N domain KAB03_02565 PF03180 NLPA lipoprotein KAB03_02566 PF00005 ABC transporter KAB03_02566 PF09383 NIL domain KAB03_02567 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02568 PF00753 Metallo-beta-lactamase superfamily KAB03_02568 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAB03_02570 PF00375 Sodium:dicarboxylate symporter family KAB03_02573 PF13610 DDE domain KAB03_02574 PF01051 Initiator Replication protein KAB03_02578 PF03050 Transposase IS66 family KAB03_02578 PF13007 Transposase C of IS166 homeodomain KAB03_02578 PF13005 zinc-finger binding domain of transposase IS66 KAB03_02578 PF13817 IS66 C-terminal element KAB03_02580 PF01636 Phosphotransferase enzyme family KAB03_02584 PF07091 Ribosomal RNA methyltransferase (FmrO) KAB03_02585 PF13737 Transposase DDE domain KAB03_02587 PF02470 MlaD protein KAB03_02588 PF04403 Paraquat-inducible protein A KAB03_02590 PF06826 Predicted Permease Membrane Region KAB03_02590 PF02080 TrkA-C domain KAB03_02591 PF00155 Aminotransferase class I and II KAB03_02594 PF08946 Osmosensory transporter coiled coil KAB03_02594 PF00083 Sugar (and other) transporter KAB03_02604 PF00392 Bacterial regulatory proteins, gntR family KAB03_02604 PF07729 FCD domain KAB03_02606 PF03616 Sodium/glutamate symporter KAB03_02607 PF00561 alpha/beta hydrolase fold KAB03_02612 PF04076 Bacterial OB fold (BOF) protein KAB03_02619 PF00324 Amino acid permease KAB03_02620 PF00171 Aldehyde dehydrogenase family KAB03_02621 PF00202 Aminotransferase class-III KAB03_02622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02622 PF03466 LysR substrate binding domain KAB03_02627 PF00069 Protein kinase domain KAB03_02631 PF00814 Glycoprotease family KAB03_02632 PF01165 Ribosomal protein S21 KAB03_02633 PF09424 Yqey-like protein KAB03_02634 PF01435 Peptidase family M48 KAB03_02635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB03_02635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB03_02638 PF00156 Phosphoribosyl transferase domain KAB03_02639 PF02674 Colicin V production protein KAB03_02640 PF01180 Dihydroorotate dehydrogenase KAB03_02644 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAB03_02644 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAB03_02645 PF00881 Nitroreductase family KAB03_02647 PF00271 Helicase conserved C-terminal domain KAB03_02647 PF00270 DEAD/DEAH box helicase KAB03_02648 PF00313 'Cold-shock' DNA-binding domain KAB03_02650 PF00140 Sigma-70 factor, region 1.2 KAB03_02650 PF04542 Sigma-70 region 2 KAB03_02650 PF04545 Sigma-70, region 4 KAB03_02651 PF04241 Protein of unknown function (DUF423) KAB03_02653 PF05690 Thiazole biosynthesis protein ThiG KAB03_02655 PF03883 Peroxide stress protein YaaA KAB03_02657 PF12706 Beta-lactamase superfamily domain KAB03_02658 PF01546 Peptidase family M20/M25/M40 KAB03_02658 PF07687 Peptidase dimerisation domain KAB03_02660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB03_02661 PF01817 Chorismate mutase type II KAB03_02661 PF00800 Prephenate dehydratase KAB03_02661 PF01842 ACT domain KAB03_02662 PF00756 Putative esterase KAB03_02663 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_02663 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02663 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02664 PF00375 Sodium:dicarboxylate symporter family KAB03_02665 PF02885 Glycosyl transferase family, helical bundle domain KAB03_02665 PF00591 Glycosyl transferase family, a/b domain KAB03_02666 PF07023 Protein of unknown function (DUF1315) KAB03_02667 PF01513 ATP-NAD kinase KAB03_02668 PF14814 Bifunctional transglycosylase second domain KAB03_02668 PF00905 Penicillin binding protein transpeptidase domain KAB03_02668 PF00912 Transglycosylase KAB03_02670 PF00293 NUDIX domain KAB03_02672 PF08521 Two-component sensor kinase N-terminal KAB03_02672 PF00512 His Kinase A (phospho-acceptor) domain KAB03_02672 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_02673 PF00072 Response regulator receiver domain KAB03_02673 PF00486 Transcriptional regulatory protein, C terminal KAB03_02675 PF00437 Type II/IV secretion system protein KAB03_02677 PF18389 TrmO C-terminal domain KAB03_02677 PF01980 tRNA-methyltransferase O KAB03_02678 PF00175 Oxidoreductase NAD-binding domain KAB03_02678 PF00970 Oxidoreductase FAD-binding domain KAB03_02679 PF02567 Phenazine biosynthesis-like protein KAB03_02680 PF00392 Bacterial regulatory proteins, gntR family KAB03_02680 PF00155 Aminotransferase class I and II KAB03_02682 PF00037 4Fe-4S binding domain KAB03_02683 PF00893 Small Multidrug Resistance protein KAB03_02684 PF00005 ABC transporter KAB03_02685 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02686 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02687 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB03_02688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02688 PF03466 LysR substrate binding domain KAB03_02690 PF13533 Biotin-lipoyl like KAB03_02691 PF00873 AcrB/AcrD/AcrF family KAB03_02692 PF02321 Outer membrane efflux protein KAB03_02693 PF00464 Serine hydroxymethyltransferase KAB03_02699 PF00005 ABC transporter KAB03_02700 PF01061 ABC-2 type transporter KAB03_02701 PF14489 QueF-like protein KAB03_02701 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KAB03_02703 PF01098 Cell cycle protein KAB03_02704 PF13406 Transglycosylase SLT domain KAB03_02705 PF03330 Lytic transglycolase KAB03_02705 PF05036 Sporulation related domain KAB03_02709 PF12833 Helix-turn-helix domain KAB03_02711 PF00889 Elongation factor TS KAB03_02712 PF00318 Ribosomal protein S2 KAB03_02713 PF00557 Metallopeptidase family M24 KAB03_02715 PF07690 Major Facilitator Superfamily KAB03_02718 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB03_02718 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02719 PF04055 Radical SAM superfamily KAB03_02720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_02720 PF09317 Domain of unknown function (DUF1974) KAB03_02720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_02723 PF05221 S-adenosyl-L-homocysteine hydrolase KAB03_02723 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB03_02724 PF02219 Methylenetetrahydrofolate reductase KAB03_02725 PF04452 RNA methyltransferase KAB03_02726 PF03707 Bacterial signalling protein N terminal repeat KAB03_02726 PF00990 Diguanylate cyclase, GGDEF domain KAB03_02726 PF00563 EAL domain KAB03_02727 PF00390 Malic enzyme, N-terminal domain KAB03_02727 PF03949 Malic enzyme, NAD binding domain KAB03_02727 PF01515 Phosphate acetyl/butaryl transferase KAB03_02728 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB03_02728 PF01743 Poly A polymerase head domain KAB03_02729 PF13180 PDZ domain KAB03_02730 PF01784 NIF3 (NGG1p interacting factor 3) KAB03_02731 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAB03_02731 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAB03_02738 PF01040 UbiA prenyltransferase family KAB03_02739 PF04345 Chorismate lyase KAB03_02741 PF00854 POT family KAB03_02743 PF00117 Glutamine amidotransferase class-I KAB03_02744 PF01433 Peptidase family M1 domain KAB03_02744 PF11838 ERAP1-like C-terminal domain KAB03_02745 PF07715 TonB-dependent Receptor Plug Domain KAB03_02745 PF00593 TonB dependent receptor KAB03_02746 PF00591 Glycosyl transferase family, a/b domain KAB03_02746 PF02885 Glycosyl transferase family, helical bundle domain KAB03_02747 PF00218 Indole-3-glycerol phosphate synthase KAB03_02750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB03_02750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAB03_02751 PF01799 [2Fe-2S] binding domain KAB03_02751 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_02755 PF00144 Beta-lactamase KAB03_02758 PF05675 Protein of unknown function (DUF817) KAB03_02759 PF01208 Uroporphyrinogen decarboxylase (URO-D) KAB03_02761 PF00425 chorismate binding enzyme KAB03_02763 PF00975 Thioesterase domain KAB03_02764 PF00664 ABC transporter transmembrane region KAB03_02764 PF00005 ABC transporter KAB03_02765 PF00664 ABC transporter transmembrane region KAB03_02765 PF00005 ABC transporter KAB03_02767 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB03_02768 PF00550 Phosphopantetheine attachment site KAB03_02768 PF00857 Isochorismatase family KAB03_02769 PF13193 AMP-binding enzyme C-terminal domain KAB03_02769 PF00501 AMP-binding enzyme KAB03_02770 PF00550 Phosphopantetheine attachment site KAB03_02770 PF00501 AMP-binding enzyme KAB03_02770 PF00668 Condensation domain KAB03_02771 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB03_02772 PF00593 TonB dependent receptor KAB03_02772 PF07715 TonB-dependent Receptor Plug Domain KAB03_02773 PF01497 Periplasmic binding protein KAB03_02774 PF00005 ABC transporter KAB03_02775 PF01032 FecCD transport family KAB03_02776 PF01032 FecCD transport family KAB03_02779 PF00975 Thioesterase domain KAB03_02779 PF00550 Phosphopantetheine attachment site KAB03_02779 PF00501 AMP-binding enzyme KAB03_02779 PF00668 Condensation domain KAB03_02779 PF13193 AMP-binding enzyme C-terminal domain KAB03_02780 PF00501 AMP-binding enzyme KAB03_02780 PF13193 AMP-binding enzyme C-terminal domain KAB03_02780 PF00668 Condensation domain KAB03_02780 PF00550 Phosphopantetheine attachment site KAB03_02782 PF08348 YheO-like PAS domain KAB03_02782 PF13309 HTH domain KAB03_02783 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_02784 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_02785 PF02678 Pirin KAB03_02785 PF17954 Quercetinase C-terminal cupin domain KAB03_02788 PF00440 Bacterial regulatory proteins, tetR family KAB03_02789 PF00698 Acyl transferase domain KAB03_02789 PF14765 Polyketide synthase dehydratase KAB03_02789 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_02789 PF08659 KR domain KAB03_02789 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_02789 PF16197 Ketoacyl-synthetase C-terminal extension KAB03_02789 PF09277 Erythronolide synthase, docking KAB03_02789 PF00550 Phosphopantetheine attachment site KAB03_02789 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_02789 PF08990 Erythronolide synthase docking KAB03_02790 PF13378 Enolase C-terminal domain-like KAB03_02790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB03_02791 PF00083 Sugar (and other) transporter KAB03_02792 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KAB03_02794 PF00892 EamA-like transporter family KAB03_02798 PF01266 FAD dependent oxidoreductase KAB03_02798 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB03_02799 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02799 PF18113 Rubredoxin binding C-terminal domain KAB03_02801 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB03_02801 PF00355 Rieske [2Fe-2S] domain KAB03_02802 PF02028 BCCT, betaine/carnitine/choline family transporter KAB03_02803 PF02028 BCCT, betaine/carnitine/choline family transporter KAB03_02804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02804 PF03466 LysR substrate binding domain KAB03_02805 PF00324 Amino acid permease KAB03_02806 PF00171 Aldehyde dehydrogenase family KAB03_02809 PF06018 CodY GAF-like domain KAB03_02809 PF17853 GGDEF-like domain KAB03_02809 PF13556 PucR C-terminal helix-turn-helix domain KAB03_02816 PF04328 Selenoprotein, putative KAB03_02817 PF02554 Carbon starvation protein CstA KAB03_02817 PF13722 5TM C-terminal transporter carbon starvation CstA KAB03_02818 PF01132 Elongation factor P (EF-P) OB domain KAB03_02818 PF09285 Elongation factor P, C-terminal KAB03_02818 PF08207 Elongation factor P (EF-P) KOW-like domain KAB03_02819 PF04055 Radical SAM superfamily KAB03_02822 PF01197 Ribosomal protein L31 KAB03_02823 PF13593 SBF-like CPA transporter family (DUF4137) KAB03_02824 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB03_02825 PF07690 Major Facilitator Superfamily KAB03_02826 PF13654 AAA domain KAB03_02826 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB03_02827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02827 PF03466 LysR substrate binding domain KAB03_02828 PF01476 LysM domain KAB03_02828 PF01551 Peptidase family M23 KAB03_02829 PF01975 Survival protein SurE KAB03_02832 PF07943 Penicillin-binding protein 5, C-terminal domain KAB03_02832 PF00768 D-alanyl-D-alanine carboxypeptidase KAB03_02833 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_02834 PF13344 Haloacid dehalogenase-like hydrolase KAB03_02834 PF00293 NUDIX domain KAB03_02836 PF04356 Protein of unknown function (DUF489) KAB03_02837 PF00206 Lyase KAB03_02837 PF08328 Adenylosuccinate lyase C-terminal KAB03_02839 PF00872 Transposase, Mutator family KAB03_02841 PF01343 Peptidase family S49 KAB03_02841 PF08496 Peptidase family S49 N-terminal KAB03_02842 PF00005 ABC transporter KAB03_02843 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02844 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02845 PF12849 PBP superfamily domain KAB03_02846 PF00324 Amino acid permease KAB03_02847 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB03_02847 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB03_02847 PF00205 Thiamine pyrophosphate enzyme, central domain KAB03_02848 PF01037 Lrp/AsnC ligand binding domain KAB03_02849 PF00171 Aldehyde dehydrogenase family KAB03_02850 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB03_02851 PF00202 Aminotransferase class-III KAB03_02853 PF17754 MftR C-terminal domain KAB03_02853 PF00440 Bacterial regulatory proteins, tetR family KAB03_02855 PF00487 Fatty acid desaturase KAB03_02856 PF00175 Oxidoreductase NAD-binding domain KAB03_02856 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB03_02856 PF00970 Oxidoreductase FAD-binding domain KAB03_02857 PF00440 Bacterial regulatory proteins, tetR family KAB03_02859 PF18339 RapA N-terminal Tudor like domain 1 KAB03_02859 PF18337 RapA N-terminal Tudor like domain KAB03_02859 PF12137 RNA polymerase recycling family C-terminal KAB03_02859 PF00271 Helicase conserved C-terminal domain KAB03_02859 PF00176 SNF2 family N-terminal domain KAB03_02860 PF00849 RNA pseudouridylate synthase KAB03_02862 PF00202 Aminotransferase class-III KAB03_02863 PF02581 Thiamine monophosphate synthase KAB03_02868 PF00675 Insulinase (Peptidase family M16) KAB03_02868 PF05193 Peptidase M16 inactive domain KAB03_02869 PF02567 Phenazine biosynthesis-like protein KAB03_02872 PF02567 Phenazine biosynthesis-like protein KAB03_02874 PF03466 LysR substrate binding domain KAB03_02874 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02875 PF06779 Uncharacterised MFS-type transporter YbfB KAB03_02878 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB03_02879 PF00849 RNA pseudouridylate synthase KAB03_02880 PF03971 Monomeric isocitrate dehydrogenase KAB03_02882 PF00768 D-alanyl-D-alanine carboxypeptidase KAB03_02882 PF07943 Penicillin-binding protein 5, C-terminal domain KAB03_02883 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_02884 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB03_02885 PF00875 DNA photolyase KAB03_02885 PF03441 FAD binding domain of DNA photolyase KAB03_02891 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB03_02894 PF03060 Nitronate monooxygenase KAB03_02895 PF01207 Dihydrouridine synthase (Dus) KAB03_02896 PF07759 Protein of unknown function (DUF1615) KAB03_02898 PF01472 PUA domain KAB03_02898 PF00696 Amino acid kinase family KAB03_02899 PF01926 50S ribosome-binding GTPase KAB03_02899 PF01018 GTP1/OBG KAB03_02902 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB03_02902 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB03_02903 PF00892 EamA-like transporter family KAB03_02905 PF04851 Type III restriction enzyme, res subunit KAB03_02905 PF02151 UvrB/uvrC motif KAB03_02905 PF12344 Ultra-violet resistance protein B KAB03_02905 PF17757 UvrB interaction domain KAB03_02905 PF00271 Helicase conserved C-terminal domain KAB03_02907 PF00990 Diguanylate cyclase, GGDEF domain KAB03_02907 PF17151 Periplasmic sensor domain KAB03_02914 PF00106 short chain dehydrogenase KAB03_02915 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KAB03_02916 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KAB03_02917 PF11967 Recombination protein O N terminal KAB03_02917 PF02565 Recombination protein O C terminal KAB03_02919 PF01926 50S ribosome-binding GTPase KAB03_02919 PF07650 KH domain KAB03_02920 PF14622 Ribonuclease-III-like KAB03_02920 PF00035 Double-stranded RNA binding motif KAB03_02922 PF10502 Signal peptidase, peptidase S26 KAB03_02923 PF06421 GTP-binding protein LepA C-terminus KAB03_02923 PF03144 Elongation factor Tu domain 2 KAB03_02923 PF00009 Elongation factor Tu GTP binding domain KAB03_02923 PF00679 Elongation factor G C-terminus KAB03_02925 PF13180 PDZ domain KAB03_02926 PF00890 FAD binding domain KAB03_02926 PF02910 Fumarate reductase flavoprotein C-term KAB03_02928 PF02223 Thymidylate kinase KAB03_02929 PF02618 YceG-like family KAB03_02930 PF01063 Amino-transferase class IV KAB03_02933 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02934 PF00528 Binding-protein-dependent transport system inner membrane component KAB03_02935 PF00005 ABC transporter KAB03_02935 PF12857 TOBE-like domain KAB03_02936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_02936 PF03466 LysR substrate binding domain KAB03_02938 PF14602 Hexapeptide repeat of succinyl-transferase KAB03_02938 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_02938 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KAB03_02940 PF06508 Queuosine biosynthesis protein QueC KAB03_02943 PF00578 AhpC/TSA family KAB03_02945 PF00293 NUDIX domain KAB03_02945 PF01467 Cytidylyltransferase-like KAB03_02946 PF00378 Enoyl-CoA hydratase/isomerase KAB03_02947 PF01784 NIF3 (NGG1p interacting factor 3) KAB03_02949 PF07690 Major Facilitator Superfamily KAB03_02950 PF02769 AIR synthase related protein, C-terminal domain KAB03_02950 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KAB03_02950 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAB03_02951 PF01966 HD domain KAB03_02952 PF01330 RuvA N terminal domain KAB03_02952 PF07499 RuvA, C-terminal domain KAB03_02953 PF17864 RuvB AAA lid domain KAB03_02953 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAB03_02953 PF05491 RuvB C-terminal winged helix domain KAB03_02954 PF07687 Peptidase dimerisation domain KAB03_02954 PF01546 Peptidase family M20/M25/M40 KAB03_02955 PF03061 Thioesterase superfamily KAB03_02956 PF01618 MotA/TolQ/ExbB proton channel family KAB03_02957 PF02472 Biopolymer transport protein ExbD/TolR KAB03_02959 PF04052 TolB amino-terminal domain KAB03_02959 PF07676 WD40-like Beta Propeller Repeat KAB03_02960 PF00691 OmpA family KAB03_02962 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KAB03_02963 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB03_02963 PF00588 SpoU rRNA Methylase family KAB03_02969 PF00308 Bacterial dnaA protein KAB03_02969 PF08299 Bacterial dnaA protein helix-turn-helix KAB03_02969 PF11638 DnaA N-terminal domain KAB03_02970 PF01594 AI-2E family transporter KAB03_02971 PF02769 AIR synthase related protein, C-terminal domain KAB03_02971 PF00586 AIR synthase related protein, N-terminal domain KAB03_02972 PF00551 Formyl transferase KAB03_02973 PF12697 Alpha/beta hydrolase family KAB03_02974 PF01343 Peptidase family S49 KAB03_02974 PF06965 Na+/H+ antiporter 1 KAB03_02976 PF03772 Competence protein KAB03_02976 PF13567 Domain of unknown function (DUF4131) KAB03_02976 PF00753 Metallo-beta-lactamase superfamily KAB03_02977 PF00005 ABC transporter KAB03_02978 PF12704 MacB-like periplasmic core domain KAB03_02978 PF02687 FtsX-like permease family KAB03_02980 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KAB03_02983 PF00266 Aminotransferase class-V KAB03_02985 PF13533 Biotin-lipoyl like KAB03_02989 PF00535 Glycosyl transferase family 2 KAB03_02992 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB03_02992 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB03_02993 PF00766 Electron transfer flavoprotein FAD-binding domain KAB03_02993 PF01012 Electron transfer flavoprotein domain KAB03_02994 PF01012 Electron transfer flavoprotein domain KAB03_02995 PF00589 Phage integrase family KAB03_02995 PF02899 Phage integrase, N-terminal SAM-like domain KAB03_02996 PF01810 LysE type translocator KAB03_02997 PF01678 Diaminopimelate epimerase KAB03_02998 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAB03_02998 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAB03_03000 PF00324 Amino acid permease KAB03_03001 PF18073 Rubredoxin metal binding domain KAB03_03003 PF00152 tRNA synthetases class II (D, K and N) KAB03_03004 PF11890 Domain of unknown function (DUF3410) KAB03_03004 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB03_03004 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB03_03005 PF06803 Protein of unknown function (DUF1232) KAB03_03006 PF02634 FdhD/NarQ family KAB03_03007 PF00384 Molybdopterin oxidoreductase KAB03_03008 PF02595 Glycerate kinase family KAB03_03011 PF00881 Nitroreductase family KAB03_03016 PF13193 AMP-binding enzyme C-terminal domain KAB03_03016 PF00550 Phosphopantetheine attachment site KAB03_03016 PF00668 Condensation domain KAB03_03016 PF00975 Thioesterase domain KAB03_03016 PF00501 AMP-binding enzyme KAB03_03019 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB03_03019 PF03449 Transcription elongation factor, N-terminal KAB03_03020 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB03_03020 PF01464 Transglycosylase SLT domain KAB03_03022 PF01171 PP-loop family KAB03_03023 PF01464 Transglycosylase SLT domain KAB03_03024 PF01435 Peptidase family M48 KAB03_03026 PF00873 AcrB/AcrD/AcrF family KAB03_03027 PF03009 Glycerophosphoryl diester phosphodiesterase family KAB03_03029 PF01219 Prokaryotic diacylglycerol kinase KAB03_03030 PF00118 TCP-1/cpn60 chaperonin family KAB03_03031 PF00166 Chaperonin 10 Kd subunit KAB03_03033 PF00149 Calcineurin-like phosphoesterase KAB03_03034 PF00781 Diacylglycerol kinase catalytic domain KAB03_03035 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KAB03_03035 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KAB03_03036 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAB03_03036 PF01266 FAD dependent oxidoreductase KAB03_03037 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAB03_03037 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAB03_03038 PF00083 Sugar (and other) transporter KAB03_03041 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAB03_03041 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAB03_03044 PF09423 PhoD-like phosphatase KAB03_03044 PF16655 PhoD-like phosphatase, N-terminal domain KAB03_03048 PF00809 Pterin binding enzyme KAB03_03049 PF17862 AAA+ lid domain KAB03_03049 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_03049 PF06480 FtsH Extracellular KAB03_03049 PF01434 Peptidase family M41 KAB03_03050 PF01728 FtsJ-like methyltransferase KAB03_03051 PF01985 CRS1 / YhbY (CRM) domain KAB03_03054 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAB03_03054 PF00117 Glutamine amidotransferase class-I KAB03_03055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB03_03055 PF02142 MGS-like domain KAB03_03055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB03_03056 PF03449 Transcription elongation factor, N-terminal KAB03_03056 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB03_03057 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_03058 PF00582 Universal stress protein family KAB03_03059 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB03_03061 PF09587 Bacterial capsule synthesis protein PGA_cap KAB03_03064 PF13737 Transposase DDE domain KAB03_03067 PF00999 Sodium/hydrogen exchanger family KAB03_03068 PF04228 Putative neutral zinc metallopeptidase KAB03_03069 PF05661 Protein of unknown function (DUF808) KAB03_03070 PF00579 tRNA synthetases class I (W and Y) KAB03_03071 PF02629 CoA binding domain KAB03_03071 PF00549 CoA-ligase KAB03_03072 PF00549 CoA-ligase KAB03_03072 PF08442 ATP-grasp domain KAB03_03073 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB03_03073 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_03074 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB03_03074 PF00364 Biotin-requiring enzyme KAB03_03074 PF02817 e3 binding domain KAB03_03075 PF16078 2-oxoglutarate dehydrogenase N-terminus KAB03_03075 PF02779 Transketolase, pyrimidine binding domain KAB03_03075 PF00676 Dehydrogenase E1 component KAB03_03075 PF16870 2-oxoglutarate dehydrogenase C-terminal KAB03_03076 PF13085 2Fe-2S iron-sulfur cluster binding domain KAB03_03077 PF00890 FAD binding domain KAB03_03077 PF02910 Fumarate reductase flavoprotein C-term KAB03_03078 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB03_03079 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB03_03080 PF00285 Citrate synthase, C-terminal domain KAB03_03086 PF04545 Sigma-70, region 4 KAB03_03086 PF04539 Sigma-70 region 3 KAB03_03086 PF04542 Sigma-70 region 2 KAB03_03086 PF00140 Sigma-70 factor, region 1.2 KAB03_03086 PF04546 Sigma-70, non-essential region KAB03_03086 PF03979 Sigma-70 factor, region 1.1 KAB03_03087 PF04359 Protein of unknown function (DUF493) KAB03_03088 PF03099 Biotin/lipoate A/B protein ligase family KAB03_03090 PF00465 Iron-containing alcohol dehydrogenase KAB03_03091 PF13520 Amino acid permease KAB03_03092 PF03358 NADPH-dependent FMN reductase KAB03_03093 PF01638 HxlR-like helix-turn-helix KAB03_03094 PF00588 SpoU rRNA Methylase family KAB03_03095 PF14824 Sirohaem biosynthesis protein central KAB03_03095 PF10414 Sirohaem synthase dimerisation region KAB03_03095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB03_03096 PF02403 Seryl-tRNA synthetase N-terminal domain KAB03_03096 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB03_03098 PF03548 Outer membrane lipoprotein carrier protein LolA KAB03_03099 PF01016 Ribosomal L27 protein KAB03_03100 PF00829 Ribosomal prokaryotic L21 protein KAB03_03101 PF00348 Polyprenyl synthetase KAB03_03103 PF01569 PAP2 superfamily KAB03_03104 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_03104 PF00529 HlyD membrane-fusion protein of T1SS KAB03_03105 PF00873 AcrB/AcrD/AcrF family KAB03_03106 PF02321 Outer membrane efflux protein KAB03_03107 PF01906 Putative heavy-metal-binding KAB03_03108 PF01906 Putative heavy-metal-binding KAB03_03112 PF10458 Valyl tRNA synthetase tRNA binding arm KAB03_03112 PF00133 tRNA synthetases class I (I, L, M and V) KAB03_03112 PF08264 Anticodon-binding domain of tRNA KAB03_03116 PF03466 LysR substrate binding domain KAB03_03116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03117 PF00909 Ammonium Transporter Family KAB03_03119 PF00512 His Kinase A (phospho-acceptor) domain KAB03_03119 PF08521 Two-component sensor kinase N-terminal KAB03_03119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03120 PF00072 Response regulator receiver domain KAB03_03120 PF00486 Transcriptional regulatory protein, C terminal KAB03_03121 PF08019 Phosphoethanolamine transferase EptA/EptB KAB03_03121 PF00884 Sulfatase KAB03_03125 PF01734 Patatin-like phospholipase KAB03_03127 PF01145 SPFH domain / Band 7 family KAB03_03128 PF04237 YjbR KAB03_03129 PF00348 Polyprenyl synthetase KAB03_03130 PF04303 PrpF protein KAB03_03131 PF00324 Amino acid permease KAB03_03133 PF01965 DJ-1/PfpI family KAB03_03134 PF08990 Erythronolide synthase docking KAB03_03134 PF00550 Phosphopantetheine attachment site KAB03_03134 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB03_03134 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB03_03134 PF16197 Ketoacyl-synthetase C-terminal extension KAB03_03134 PF09277 Erythronolide synthase, docking KAB03_03134 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_03134 PF08659 KR domain KAB03_03134 PF14765 Polyketide synthase dehydratase KAB03_03134 PF00698 Acyl transferase domain KAB03_03135 PF06719 AraC-type transcriptional regulator N-terminus KAB03_03135 PF12833 Helix-turn-helix domain KAB03_03136 PF02673 Bacitracin resistance protein BacA KAB03_03140 PF02525 Flavodoxin-like fold KAB03_03143 PF01507 Phosphoadenosine phosphosulfate reductase family KAB03_03144 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KAB03_03144 PF06974 Protein of unknown function (DUF1298) KAB03_03146 PF00575 S1 RNA binding domain KAB03_03146 PF10150 Ribonuclease E/G family KAB03_03147 PF02545 Maf-like protein KAB03_03148 PF04093 rod shape-determining protein MreD KAB03_03149 PF04085 rod shape-determining protein MreC KAB03_03151 PF02686 Glu-tRNAGln amidotransferase C subunit KAB03_03152 PF01425 Amidase KAB03_03153 PF02934 GatB/GatE catalytic domain KAB03_03153 PF02637 GatB domain KAB03_03162 PF05992 SbmA/BacA-like family KAB03_03163 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_03163 PF13291 ACT domain KAB03_03164 PF01734 Patatin-like phospholipase KAB03_03165 PF01235 Sodium:alanine symporter family KAB03_03167 PF00881 Nitroreductase family KAB03_03168 PF07690 Major Facilitator Superfamily KAB03_03169 PF12805 FUSC-like inner membrane protein yccS KAB03_03171 PF00175 Oxidoreductase NAD-binding domain KAB03_03171 PF00667 FAD binding domain KAB03_03171 PF00258 Flavodoxin KAB03_03179 PF17969 L,D-transpeptidase C-terminal domain KAB03_03179 PF03734 L,D-transpeptidase catalytic domain KAB03_03180 PF04304 Protein of unknown function (DUF454) KAB03_03182 PF08085 Entericidin EcnA/B family KAB03_03183 PF07687 Peptidase dimerisation domain KAB03_03183 PF01546 Peptidase family M20/M25/M40 KAB03_03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03185 PF01627 Hpt domain KAB03_03185 PF01584 CheW-like domain KAB03_03185 PF00072 Response regulator receiver domain KAB03_03186 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAB03_03186 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KAB03_03187 PF01584 CheW-like domain KAB03_03188 PF00072 Response regulator receiver domain KAB03_03189 PF00072 Response regulator receiver domain KAB03_03192 PF00873 AcrB/AcrD/AcrF family KAB03_03193 PF04073 Aminoacyl-tRNA editing domain KAB03_03193 PF03129 Anticodon binding domain KAB03_03193 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB03_03194 PF07411 Domain of unknown function (DUF1508) KAB03_03195 PF08274 PhnA Zinc-Ribbon KAB03_03195 PF03831 PhnA domain KAB03_03198 PF04343 Protein of unknown function, DUF488 KAB03_03200 PF01571 Aminomethyltransferase folate-binding domain KAB03_03201 PF13098 Thioredoxin-like domain KAB03_03201 PF10411 Disulfide bond isomerase protein N-terminus KAB03_03204 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB03_03205 PF07715 TonB-dependent Receptor Plug Domain KAB03_03205 PF00593 TonB dependent receptor KAB03_03208 PF07715 TonB-dependent Receptor Plug Domain KAB03_03208 PF00593 TonB dependent receptor KAB03_03209 PF02245 Methylpurine-DNA glycosylase (MPG) KAB03_03210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB03_03210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KAB03_03210 PF06827 Zinc finger found in FPG and IleRS KAB03_03213 PF01741 Large-conductance mechanosensitive channel, MscL KAB03_03215 PF00860 Permease family KAB03_03216 PF08468 Methyltransferase small domain N-terminal KAB03_03216 PF05175 Methyltransferase small domain KAB03_03217 PF00324 Amino acid permease KAB03_03218 PF01139 tRNA-splicing ligase RtcB KAB03_03220 PF13505 Outer membrane protein beta-barrel domain KAB03_03220 PF00691 OmpA family KAB03_03222 PF02803 Thiolase, C-terminal domain KAB03_03222 PF00108 Thiolase, N-terminal domain KAB03_03224 PF00893 Small Multidrug Resistance protein KAB03_03226 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB03_03226 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB03_03227 PF01011 PQQ enzyme repeat KAB03_03228 PF04966 Carbohydrate-selective porin, OprB family KAB03_03229 PF02515 CoA-transferase family III KAB03_03230 PF12833 Helix-turn-helix domain KAB03_03230 PF02311 AraC-like ligand binding domain KAB03_03231 PF02803 Thiolase, C-terminal domain KAB03_03231 PF00108 Thiolase, N-terminal domain KAB03_03232 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB03_03232 PF00378 Enoyl-CoA hydratase/isomerase KAB03_03232 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB03_03238 PF03006 Haemolysin-III related KAB03_03239 PF00083 Sugar (and other) transporter KAB03_03239 PF07690 Major Facilitator Superfamily KAB03_03241 PF02810 SEC-C motif KAB03_03241 PF07516 SecA Wing and Scaffold domain KAB03_03241 PF01043 SecA preprotein cross-linking domain KAB03_03241 PF07517 SecA DEAD-like domain KAB03_03242 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB03_03242 PF00578 AhpC/TSA family KAB03_03243 PF00753 Metallo-beta-lactamase superfamily KAB03_03246 PF02875 Mur ligase family, glutamate ligase domain KAB03_03246 PF08245 Mur ligase middle domain KAB03_03247 PF01039 Carboxyl transferase domain KAB03_03248 PF00290 Tryptophan synthase alpha chain KAB03_03253 PF00291 Pyridoxal-phosphate dependent enzyme KAB03_03254 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAB03_03255 PF00593 TonB dependent receptor KAB03_03255 PF07715 TonB-dependent Receptor Plug Domain KAB03_03256 PF01923 Cobalamin adenosyltransferase KAB03_03260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KAB03_03261 PF00072 Response regulator receiver domain KAB03_03261 PF00486 Transcriptional regulatory protein, C terminal KAB03_03262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03262 PF00512 His Kinase A (phospho-acceptor) domain KAB03_03262 PF00672 HAMP domain KAB03_03264 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB03_03264 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_03264 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_03264 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_03265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_03265 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_03265 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB03_03265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_03266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03266 PF03466 LysR substrate binding domain KAB03_03267 PF02798 Glutathione S-transferase, N-terminal domain KAB03_03267 PF00043 Glutathione S-transferase, C-terminal domain KAB03_03268 PF06146 Phosphate-starvation-inducible E KAB03_03272 PF00593 TonB dependent receptor KAB03_03272 PF07715 TonB-dependent Receptor Plug Domain KAB03_03274 PF01336 OB-fold nucleic acid binding domain KAB03_03274 PF00152 tRNA synthetases class II (D, K and N) KAB03_03274 PF02938 GAD domain KAB03_03275 PF17102 Stealth protein CR3, conserved region 3 KAB03_03275 PF11380 Stealth protein CR2, conserved region 2 KAB03_03275 PF17101 Stealth protein CR1, conserved region 1 KAB03_03280 PF13439 Glycosyltransferase Family 4 KAB03_03280 PF00534 Glycosyl transferases group 1 KAB03_03281 PF00535 Glycosyl transferase family 2 KAB03_03282 PF01522 Polysaccharide deacetylase KAB03_03285 PF01063 Amino-transferase class IV KAB03_03286 PF08335 GlnD PII-uridylyltransferase KAB03_03286 PF03710 Glutamate-ammonia ligase adenylyltransferase KAB03_03287 PF07689 KaiB domain KAB03_03287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03287 PF00512 His Kinase A (phospho-acceptor) domain KAB03_03289 PF02547 Queuosine biosynthesis protein KAB03_03292 PF01702 Queuine tRNA-ribosyltransferase KAB03_03293 PF02699 Preprotein translocase subunit KAB03_03294 PF13721 SecD export protein N-terminal TM region KAB03_03294 PF02355 Protein export membrane protein KAB03_03294 PF07549 SecD/SecF GG Motif KAB03_03295 PF07549 SecD/SecF GG Motif KAB03_03295 PF02355 Protein export membrane protein KAB03_03296 PF04127 DNA / pantothenate metabolism flavoprotein KAB03_03296 PF02441 Flavoprotein KAB03_03297 PF04002 RadC-like JAB domain KAB03_03298 PF01062 Bestrophin, RFP-TM, chloride channel KAB03_03299 PF02811 PHP domain KAB03_03300 PF04279 Intracellular septation protein A KAB03_03301 PF03795 YCII-related domain KAB03_03303 PF01266 FAD dependent oxidoreductase KAB03_03303 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB03_03305 PF04461 Protein of unknown function (DUF520) KAB03_03307 PF03061 Thioesterase superfamily KAB03_03308 PF00085 Thioredoxin KAB03_03309 PF00561 alpha/beta hydrolase fold KAB03_03310 PF00753 Metallo-beta-lactamase superfamily KAB03_03310 PF04273 Putative phosphatase (DUF442) KAB03_03312 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_03312 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB03_03319 PF00990 Diguanylate cyclase, GGDEF domain KAB03_03319 PF17152 Periplasmic sensor domain KAB03_03320 PF00691 OmpA family KAB03_03320 PF01389 OmpA-like transmembrane domain KAB03_03321 PF10518 TAT (twin-arginine translocation) pathway signal sequence KAB03_03321 PF00149 Calcineurin-like phosphoesterase KAB03_03322 PF13091 PLD-like domain KAB03_03324 PF13167 GTP-binding GTPase N-terminal KAB03_03324 PF16360 GTP-binding GTPase Middle Region KAB03_03324 PF01926 50S ribosome-binding GTPase KAB03_03328 PF00149 Calcineurin-like phosphoesterase KAB03_03329 PF00398 Ribosomal RNA adenine dimethylase KAB03_03330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KAB03_03331 PF00572 Ribosomal protein L13 KAB03_03332 PF00380 Ribosomal protein S9/S16 KAB03_03333 PF13417 Glutathione S-transferase, N-terminal domain KAB03_03333 PF00043 Glutathione S-transferase, C-terminal domain KAB03_03334 PF04386 Stringent starvation protein B KAB03_03336 PF00364 Biotin-requiring enzyme KAB03_03336 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB03_03336 PF00289 Biotin carboxylase, N-terminal domain KAB03_03336 PF02785 Biotin carboxylase C-terminal domain KAB03_03338 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_03338 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_03338 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_03339 PF01039 Carboxyl transferase domain KAB03_03342 PF17932 Tetracyclin repressor-like, C-terminal domain KAB03_03342 PF00440 Bacterial regulatory proteins, tetR family KAB03_03343 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_03343 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_03343 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_03345 PF13737 Transposase DDE domain KAB03_03354 PF01066 CDP-alcohol phosphatidyltransferase KAB03_03355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KAB03_03359 PF00056 lactate/malate dehydrogenase, NAD binding domain KAB03_03359 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KAB03_03361 PF01464 Transglycosylase SLT domain KAB03_03361 PF01551 Peptidase family M23 KAB03_03361 PF10145 Phage-related minor tail protein KAB03_03362 PF04055 Radical SAM superfamily KAB03_03362 PF01938 TRAM domain KAB03_03362 PF00919 Uncharacterized protein family UPF0004 KAB03_03363 PF02562 PhoH-like protein KAB03_03364 PF02130 Uncharacterized protein family UPF0054 KAB03_03369 PF03358 NADPH-dependent FMN reductase KAB03_03370 PF03631 Virulence factor BrkB KAB03_03371 PF00892 EamA-like transporter family KAB03_03372 PF12833 Helix-turn-helix domain KAB03_03373 PF01557 Fumarylacetoacetate (FAA) hydrolase family KAB03_03382 PF00575 S1 RNA binding domain KAB03_03382 PF00773 RNB domain KAB03_03382 PF08206 Ribonuclease B OB domain KAB03_03382 PF17876 Cold shock domain KAB03_03382 PF08461 Ribonuclease R winged-helix domain KAB03_03383 PF01432 Peptidase family M3 KAB03_03384 PF09526 Probable metal-binding protein (DUF2387) KAB03_03391 PF03937 Flavinator of succinate dehydrogenase KAB03_03392 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_03392 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_03392 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_03393 PF00743 Flavin-binding monooxygenase-like KAB03_03394 PF01196 Ribosomal protein L17 KAB03_03395 PF01000 RNA polymerase Rpb3/RpoA insert domain KAB03_03395 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAB03_03395 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAB03_03396 PF00163 Ribosomal protein S4/S9 N-terminal domain KAB03_03396 PF01479 S4 domain KAB03_03397 PF00411 Ribosomal protein S11 KAB03_03398 PF00416 Ribosomal protein S13/S18 KAB03_03399 PF00444 Ribosomal protein L36 KAB03_03400 PF00344 SecY translocase KAB03_03401 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAB03_03402 PF00327 Ribosomal protein L30p/L7e KAB03_03403 PF03719 Ribosomal protein S5, C-terminal domain KAB03_03403 PF00333 Ribosomal protein S5, N-terminal domain KAB03_03404 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAB03_03405 PF00347 Ribosomal protein L6 KAB03_03406 PF00410 Ribosomal protein S8 KAB03_03407 PF00253 Ribosomal protein S14p/S29e KAB03_03408 PF00673 ribosomal L5P family C-terminus KAB03_03408 PF00281 Ribosomal protein L5 KAB03_03409 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAB03_03409 PF00467 KOW motif KAB03_03410 PF00238 Ribosomal protein L14p/L23e KAB03_03411 PF00366 Ribosomal protein S17 KAB03_03412 PF00831 Ribosomal L29 protein KAB03_03413 PF00252 Ribosomal protein L16p/L10e KAB03_03414 PF07650 KH domain KAB03_03414 PF00189 Ribosomal protein S3, C-terminal domain KAB03_03415 PF00237 Ribosomal protein L22p/L17e KAB03_03416 PF00203 Ribosomal protein S19 KAB03_03417 PF00181 Ribosomal Proteins L2, RNA binding domain KAB03_03417 PF03947 Ribosomal Proteins L2, C-terminal domain KAB03_03418 PF00276 Ribosomal protein L23 KAB03_03419 PF00573 Ribosomal protein L4/L1 family KAB03_03420 PF00297 Ribosomal protein L3 KAB03_03421 PF00338 Ribosomal protein S10p/S20e KAB03_03422 PF00117 Glutamine amidotransferase class-I KAB03_03423 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB03_03424 PF05872 Bacterial protein of unknown function (DUF853) KAB03_03425 PF00175 Oxidoreductase NAD-binding domain KAB03_03425 PF00042 Globin KAB03_03425 PF00970 Oxidoreductase FAD-binding domain KAB03_03426 PF02082 Transcriptional regulator KAB03_03427 PF01926 50S ribosome-binding GTPase KAB03_03429 PF00375 Sodium:dicarboxylate symporter family KAB03_03431 PF01553 Acyltransferase KAB03_03434 PF00270 DEAD/DEAH box helicase KAB03_03434 PF00271 Helicase conserved C-terminal domain KAB03_03434 PF17191 RecG wedge domain KAB03_03435 PF00156 Phosphoribosyl transferase domain KAB03_03436 PF00293 NUDIX domain KAB03_03437 PF03641 Possible lysine decarboxylase KAB03_03438 PF01544 CorA-like Mg2+ transporter protein KAB03_03440 PF05494 MlaC protein KAB03_03442 PF02405 Permease MlaE KAB03_03443 PF00005 ABC transporter KAB03_03445 PF03880 DbpA RNA binding domain KAB03_03445 PF12343 Cold shock protein DEAD box A KAB03_03445 PF00270 DEAD/DEAH box helicase KAB03_03445 PF00271 Helicase conserved C-terminal domain KAB03_03446 PF00459 Inositol monophosphatase family KAB03_03447 PF02780 Transketolase, C-terminal domain KAB03_03447 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAB03_03447 PF02779 Transketolase, pyrimidine binding domain KAB03_03448 PF00925 GTP cyclohydrolase II KAB03_03449 PF01218 Coproporphyrinogen III oxidase KAB03_03450 PF08501 Shikimate dehydrogenase substrate binding domain KAB03_03450 PF01488 Shikimate / quinate 5-dehydrogenase KAB03_03450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAB03_03452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB03_03452 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB03_03452 PF02770 Acyl-CoA dehydrogenase, middle domain KAB03_03452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB03_03454 PF04024 PspC domain KAB03_03455 PF00571 CBS domain KAB03_03460 PF02091 Glycyl-tRNA synthetase alpha subunit KAB03_03461 PF05746 DALR anticodon binding domain KAB03_03461 PF02092 Glycyl-tRNA synthetase beta subunit KAB03_03463 PF00892 EamA-like transporter family KAB03_03464 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03464 PF03466 LysR substrate binding domain KAB03_03470 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KAB03_03471 PF04996 Succinylarginine dihydrolase KAB03_03472 PF00171 Aldehyde dehydrogenase family KAB03_03473 PF04958 Arginine N-succinyltransferase beta subunit KAB03_03474 PF00202 Aminotransferase class-III KAB03_03475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB03_03475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB03_03476 PF00324 Amino acid permease KAB03_03483 PF01594 AI-2E family transporter KAB03_03484 PF00080 Copper/zinc superoxide dismutase (SODC) KAB03_03485 PF12805 FUSC-like inner membrane protein yccS KAB03_03486 PF07690 Major Facilitator Superfamily KAB03_03488 PF02525 Flavodoxin-like fold KAB03_03489 PF03992 Antibiotic biosynthesis monooxygenase KAB03_03491 PF02913 FAD linked oxidases, C-terminal domain KAB03_03491 PF01565 FAD binding domain KAB03_03492 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB03_03492 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB03_03493 PF00892 EamA-like transporter family KAB03_03494 PF00892 EamA-like transporter family KAB03_03496 PF01925 Sulfite exporter TauE/SafE KAB03_03497 PF09157 Pseudouridine synthase II TruB, C-terminal KAB03_03497 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAB03_03497 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAB03_03498 PF03280 Proteobacterial lipase chaperone protein KAB03_03499 PF00561 alpha/beta hydrolase fold KAB03_03500 PF01245 Ribosomal protein L19 KAB03_03501 PF01746 tRNA (Guanine-1)-methyltransferase KAB03_03502 PF05239 PRC-barrel domain KAB03_03502 PF01782 RimM N-terminal domain KAB03_03503 PF00886 Ribosomal protein S16 KAB03_03511 PF02401 LytB protein KAB03_03512 PF00625 Guanylate kinase KAB03_03513 PF01192 RNA polymerase Rpb6 KAB03_03514 PF13291 ACT domain KAB03_03514 PF02824 TGS domain KAB03_03514 PF04607 Region found in RelA / SpoT proteins KAB03_03515 PF01042 Endoribonuclease L-PSP KAB03_03516 PF04324 BFD-like [2Fe-2S] binding domain KAB03_03517 PF00210 Ferritin-like domain KAB03_03518 PF15864 Protein glycosylation ligase KAB03_03518 PF04932 O-Antigen ligase KAB03_03518 PF11846 Virulence factor membrane-bound polymerase, C-terminal KAB03_03520 PF00114 Pilin (bacterial filament) KAB03_03520 PF07963 Prokaryotic N-terminal methylation motif KAB03_03522 PF04536 TPM domain KAB03_03523 PF04011 LemA family KAB03_03525 PF13737 Transposase DDE domain KAB03_03527 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB03_03527 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAB03_03528 PF01645 Conserved region in glutamate synthase KAB03_03528 PF01493 GXGXG motif KAB03_03528 PF04898 Glutamate synthase central domain KAB03_03528 PF00310 Glutamine amidotransferases class-II KAB03_03530 PF01761 3-dehydroquinate synthase KAB03_03531 PF01202 Shikimate kinase KAB03_03532 PF07660 Secretin and TonB N terminus short domain KAB03_03532 PF11741 AMIN domain KAB03_03532 PF03958 Bacterial type II/III secretion system short domain KAB03_03532 PF00263 Bacterial type II and III secretion system protein KAB03_03537 PF17092 Penicillin-binding protein OB-like domain KAB03_03537 PF00905 Penicillin binding protein transpeptidase domain KAB03_03537 PF00912 Transglycosylase KAB03_03538 PF13847 Methyltransferase domain KAB03_03540 PF00953 Glycosyl transferase family 4 KAB03_03541 PF02875 Mur ligase family, glutamate ligase domain KAB03_03541 PF01225 Mur ligase family, catalytic domain KAB03_03541 PF08245 Mur ligase middle domain KAB03_03542 PF02875 Mur ligase family, glutamate ligase domain KAB03_03542 PF08245 Mur ligase middle domain KAB03_03542 PF01225 Mur ligase family, catalytic domain KAB03_03543 PF00905 Penicillin binding protein transpeptidase domain KAB03_03543 PF03717 Penicillin-binding Protein dimerisation domain KAB03_03545 PF01795 MraW methylase family KAB03_03548 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB03_03551 PF00324 Amino acid permease KAB03_03557 PF01545 Cation efflux family KAB03_03558 PF00873 AcrB/AcrD/AcrF family KAB03_03559 PF00529 HlyD membrane-fusion protein of T1SS KAB03_03559 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_03562 PF04191 Phospholipid methyltransferase KAB03_03567 PF00005 ABC transporter KAB03_03567 PF12848 ABC transporter KAB03_03568 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB03_03569 PF00106 short chain dehydrogenase KAB03_03570 PF00916 Sulfate permease family KAB03_03570 PF01740 STAS domain KAB03_03571 PF16921 Tex protein YqgF-like domain KAB03_03571 PF17674 HHH domain KAB03_03571 PF00575 S1 RNA binding domain KAB03_03571 PF09371 Tex-like protein N-terminal domain KAB03_03572 PF00072 Response regulator receiver domain KAB03_03572 PF00486 Transcriptional regulatory protein, C terminal KAB03_03573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03573 PF00672 HAMP domain KAB03_03573 PF00512 His Kinase A (phospho-acceptor) domain KAB03_03574 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KAB03_03574 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KAB03_03575 PF00583 Acetyltransferase (GNAT) family KAB03_03579 PF00475 Imidazoleglycerol-phosphate dehydratase KAB03_03580 PF00117 Glutamine amidotransferase class-I KAB03_03583 PF00977 Histidine biosynthesis protein KAB03_03588 PF01636 Phosphotransferase enzyme family KAB03_03589 PF00977 Histidine biosynthesis protein KAB03_03592 PF00230 Major intrinsic protein KAB03_03597 PF02705 K+ potassium transporter KAB03_03599 PF12833 Helix-turn-helix domain KAB03_03603 PF02525 Flavodoxin-like fold KAB03_03604 PF01638 HxlR-like helix-turn-helix KAB03_03608 PF01638 HxlR-like helix-turn-helix KAB03_03611 PF02311 AraC-like ligand binding domain KAB03_03611 PF12833 Helix-turn-helix domain KAB03_03612 PF00248 Aldo/keto reductase family KAB03_03619 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03619 PF03466 LysR substrate binding domain KAB03_03620 PF07690 Major Facilitator Superfamily KAB03_03625 PF01593 Flavin containing amine oxidoreductase KAB03_03626 PF05726 Pirin C-terminal cupin domain KAB03_03626 PF02678 Pirin KAB03_03627 PF00857 Isochorismatase family KAB03_03628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03629 PF00171 Aldehyde dehydrogenase family KAB03_03630 PF00202 Aminotransferase class-III KAB03_03631 PF00392 Bacterial regulatory proteins, gntR family KAB03_03631 PF00155 Aminotransferase class I and II KAB03_03632 PF00324 Amino acid permease KAB03_03634 PF03591 AzlC protein KAB03_03636 PF00436 Single-strand binding protein family KAB03_03637 PF07690 Major Facilitator Superfamily KAB03_03639 PF03070 TENA/THI-4/PQQC family KAB03_03639 PF08543 Phosphomethylpyrimidine kinase KAB03_03639 PF02581 Thiamine monophosphate synthase KAB03_03640 PF06942 GlpM protein KAB03_03642 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_03642 PF00107 Zinc-binding dehydrogenase KAB03_03643 PF00440 Bacterial regulatory proteins, tetR family KAB03_03643 PF16925 Tetracyclin repressor-like, C-terminal domain KAB03_03644 PF17760 UvrA interaction domain KAB03_03644 PF17755 UvrA DNA-binding domain KAB03_03644 PF00005 ABC transporter KAB03_03645 PF00990 Diguanylate cyclase, GGDEF domain KAB03_03645 PF17158 Membrane-associated sensor, integral membrane domain KAB03_03647 PF02028 BCCT, betaine/carnitine/choline family transporter KAB03_03649 PF00474 Sodium:solute symporter family KAB03_03650 PF04341 Protein of unknown function, DUF485 KAB03_03651 PF00512 His Kinase A (phospho-acceptor) domain KAB03_03651 PF01627 Hpt domain KAB03_03651 PF00072 Response regulator receiver domain KAB03_03651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03651 PF00672 HAMP domain KAB03_03653 PF00196 Bacterial regulatory proteins, luxR family KAB03_03653 PF00072 Response regulator receiver domain KAB03_03654 PF03358 NADPH-dependent FMN reductase KAB03_03655 PF00296 Luciferase-like monooxygenase KAB03_03656 PF01037 Lrp/AsnC ligand binding domain KAB03_03657 PF00857 Isochorismatase family KAB03_03658 PF00501 AMP-binding enzyme KAB03_03658 PF13193 AMP-binding enzyme C-terminal domain KAB03_03658 PF16177 Acetyl-coenzyme A synthetase N-terminus KAB03_03660 PF00924 Mechanosensitive ion channel KAB03_03661 PF04452 RNA methyltransferase KAB03_03662 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAB03_03663 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB03_03666 PF00472 RF-1 domain KAB03_03666 PF03462 PCRF domain KAB03_03668 PF01368 DHH family KAB03_03668 PF02272 DHHA1 domain KAB03_03668 PF17768 RecJ OB domain KAB03_03669 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KAB03_03669 PF01243 Pyridoxamine 5'-phosphate oxidase KAB03_03670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB03_03670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB03_03670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB03_03670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB03_03671 PF00571 CBS domain KAB03_03671 PF00478 IMP dehydrogenase / GMP reductase domain KAB03_03672 PF03692 Putative zinc- or iron-chelating domain KAB03_03673 PF00258 Flavodoxin KAB03_03673 PF01613 Flavin reductase like domain KAB03_03674 PF00593 TonB dependent receptor KAB03_03674 PF07715 TonB-dependent Receptor Plug Domain KAB03_03678 PF01169 Uncharacterized protein family UPF0016 KAB03_03680 PF00364 Biotin-requiring enzyme KAB03_03680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB03_03680 PF02817 e3 binding domain KAB03_03681 PF00456 Transketolase, thiamine diphosphate binding domain KAB03_03681 PF17831 Pyruvate dehydrogenase E1 component middle domain KAB03_03682 PF01551 Peptidase family M23 KAB03_03684 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAB03_03685 PF00091 Tubulin/FtsZ family, GTPase domain KAB03_03685 PF12327 FtsZ family, C-terminal domain KAB03_03686 PF02491 SHS2 domain inserted in FTSA KAB03_03687 PF08478 POTRA domain, FtsQ-type KAB03_03687 PF03799 Cell division protein FtsQ KAB03_03688 PF01820 D-ala D-ala ligase N-terminus KAB03_03688 PF07478 D-ala D-ala ligase C-terminus KAB03_03689 PF08245 Mur ligase middle domain KAB03_03689 PF02875 Mur ligase family, glutamate ligase domain KAB03_03689 PF01225 Mur ligase family, catalytic domain KAB03_03690 PF03033 Glycosyltransferase family 28 N-terminal domain KAB03_03690 PF04101 Glycosyltransferase family 28 C-terminal domain KAB03_03691 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KAB03_03691 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KAB03_03693 PF07715 TonB-dependent Receptor Plug Domain KAB03_03693 PF00593 TonB dependent receptor KAB03_03694 PF00156 Phosphoribosyl transferase domain KAB03_03695 PF03372 Endonuclease/Exonuclease/phosphatase family KAB03_03696 PF03960 ArsC family KAB03_03698 PF07859 alpha/beta hydrolase fold KAB03_03700 PF00990 Diguanylate cyclase, GGDEF domain KAB03_03700 PF07694 5TMR of 5TMR-LYT KAB03_03701 PF11412 Disulphide bond corrector protein DsbC KAB03_03701 PF02683 Cytochrome C biogenesis protein transmembrane region KAB03_03707 PF00576 HIUase/Transthyretin family KAB03_03708 PF00860 Permease family KAB03_03710 PF01494 FAD binding domain KAB03_03711 PF03561 Allantoicase repeat KAB03_03712 PF04115 Ureidoglycolate lyase KAB03_03713 PF00204 DNA gyrase B KAB03_03713 PF00986 DNA gyrase B subunit, carboxyl terminus KAB03_03713 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03713 PF01751 Toprim domain KAB03_03714 PF05728 Uncharacterised protein family (UPF0227) KAB03_03719 PF00182 Chitinase class I KAB03_03720 PF04717 Type VI secretion system, phage-baseplate injector KAB03_03721 PF02600 Disulfide bond formation protein DsbB KAB03_03722 PF04262 Glutamate-cysteine ligase KAB03_03725 PF04286 Protein of unknown function (DUF445) KAB03_03726 PF00155 Aminotransferase class I and II KAB03_03727 PF01554 MatE KAB03_03728 PF00106 short chain dehydrogenase KAB03_03730 PF00486 Transcriptional regulatory protein, C terminal KAB03_03730 PF00072 Response regulator receiver domain KAB03_03731 PF11808 Phosphate regulon sensor protein PhoR KAB03_03731 PF00989 PAS fold KAB03_03731 PF00512 His Kinase A (phospho-acceptor) domain KAB03_03731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB03_03733 PF13737 Transposase DDE domain KAB03_03735 PF03069 Acetamidase/Formamidase family KAB03_03736 PF02666 Phosphatidylserine decarboxylase KAB03_03737 PF00581 Rhodanese-like domain KAB03_03738 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB03_03738 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAB03_03740 PF06628 Catalase-related immune-responsive KAB03_03740 PF00199 Catalase KAB03_03741 PF02580 D-Tyr-tRNA(Tyr) deacylase KAB03_03746 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB03_03746 PF00925 GTP cyclohydrolase II KAB03_03747 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAB03_03748 PF01029 NusB family KAB03_03749 PF00586 AIR synthase related protein, N-terminal domain KAB03_03749 PF02769 AIR synthase related protein, C-terminal domain KAB03_03750 PF04608 Phosphatidylglycerophosphatase A KAB03_03751 PF12804 MobA-like NTP transferase domain KAB03_03751 PF00132 Bacterial transferase hexapeptide (six repeats) KAB03_03751 PF14602 Hexapeptide repeat of succinyl-transferase KAB03_03752 PF01380 SIS domain KAB03_03753 PF01177 Asp/Glu/Hydantoin racemase KAB03_03754 PF13419 Haloacid dehalogenase-like hydrolase KAB03_03756 PF00491 Arginase family KAB03_03757 PF01979 Amidohydrolase family KAB03_03758 PF00324 Amino acid permease KAB03_03759 PF00221 Aromatic amino acid lyase KAB03_03760 PF01175 Urocanase Rossmann-like domain KAB03_03760 PF17391 Urocanase N-terminal domain KAB03_03760 PF17392 Urocanase C-terminal domain KAB03_03761 PF05962 HutD KAB03_03762 PF00392 Bacterial regulatory proteins, gntR family KAB03_03762 PF07702 UTRA domain KAB03_03764 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB03_03764 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB03_03766 PF00324 Amino acid permease KAB03_03768 PF14497 Glutathione S-transferase, C-terminal domain KAB03_03768 PF02798 Glutathione S-transferase, N-terminal domain KAB03_03769 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB03_03771 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB03_03772 PF04463 Protein of unknown function (DUF523) KAB03_03773 PF01554 MatE KAB03_03774 PF01758 Sodium Bile acid symporter family KAB03_03775 PF00857 Isochorismatase family KAB03_03776 PF00701 Dihydrodipicolinate synthetase family KAB03_03778 PF01259 SAICAR synthetase KAB03_03780 PF01226 Formate/nitrite transporter KAB03_03781 PF12002 MgsA AAA+ ATPase C terminal KAB03_03781 PF00004 ATPase family associated with various cellular activities (AAA) KAB03_03781 PF16193 AAA C-terminal domain KAB03_03782 PF07995 Glucose / Sorbosone dehydrogenase KAB03_03783 PF03692 Putative zinc- or iron-chelating domain KAB03_03786 PF07043 Protein of unknown function (DUF1328) KAB03_03789 PF10576 Iron-sulfur binding domain of endonuclease III KAB03_03789 PF00633 Helix-hairpin-helix motif KAB03_03789 PF14815 NUDIX domain KAB03_03789 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB03_03792 PF03352 Methyladenine glycosylase KAB03_03793 PF08240 Alcohol dehydrogenase GroES-like domain KAB03_03793 PF00107 Zinc-binding dehydrogenase KAB03_03794 PF00155 Aminotransferase class I and II KAB03_03794 PF00392 Bacterial regulatory proteins, gntR family KAB03_03796 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03796 PF03466 LysR substrate binding domain KAB03_03797 PF00248 Aldo/keto reductase family KAB03_03798 PF07690 Major Facilitator Superfamily KAB03_03800 PF01113 Dihydrodipicolinate reductase, N-terminus KAB03_03800 PF05173 Dihydrodipicolinate reductase, C-terminus KAB03_03802 PF01556 DnaJ C terminal domain KAB03_03802 PF00226 DnaJ domain KAB03_03802 PF00684 DnaJ central domain KAB03_03804 PF00873 AcrB/AcrD/AcrF family KAB03_03805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB03_03806 PF08361 MAATS-type transcriptional repressor, C-terminal region KAB03_03806 PF00440 Bacterial regulatory proteins, tetR family KAB03_03807 PF00311 Phosphoenolpyruvate carboxylase KAB03_03808 PF00860 Permease family KAB03_03809 PF03466 LysR substrate binding domain KAB03_03809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB03_03812 PF00920 Dehydratase family KAB03_03813 PF00551 Formyl transferase KAB03_03813 PF02911 Formyl transferase, C-terminal domain KAB03_03814 PF01029 NusB family KAB03_03814 PF01189 16S rRNA methyltransferase RsmB/F KAB03_03816 PF00209 Sodium:neurotransmitter symporter family KAB03_03824 PF00579 tRNA synthetases class I (W and Y) KAB03_03825 PF03702 Anhydro-N-acetylmuramic acid kinase KAB03_03826 PF00561 alpha/beta hydrolase fold KAB03_03827 PF01521 Iron-sulphur cluster biosynthesis KAB03_03836 PF13737 Transposase DDE domain KAB03_03838 PF05816 Toxic anion resistance protein (TelA) KAB03_03842 PF17762 HTH domain found in ParB protein KAB03_03842 PF02195 ParB-like nuclease domain KAB03_03843 PF13614 AAA domain KAB03_03849 PF13737 Transposase DDE domain KAB03_03855 PF00816 H-NS histone family KAB03_03857 PF00565 Staphylococcal nuclease homologue KAB03_03866 PF13737 Transposase DDE domain KAB03_03876 PF11799 impB/mucB/samB family C-terminal domain KAB03_03876 PF00817 impB/mucB/samB family KAB03_03876 PF13438 Domain of unknown function (DUF4113) KAB03_03877 PF11798 IMS family HHH motif KAB03_03877 PF00817 impB/mucB/samB family KAB03_03877 PF13438 Domain of unknown function (DUF4113) KAB03_03877 PF11799 impB/mucB/samB family C-terminal domain KAB03_03881 PF06122 Conjugative relaxosome accessory transposon protein KAB03_03884 PF06986 Type-1V conjugative transfer system mating pair stabilisation KAB03_03886 PF06834 TraU protein KAB03_03893 PF10411 Disulfide bond isomerase protein N-terminus KAB03_03893 PF13098 Thioredoxin-like domain KAB03_03901 PF01464 Transglycosylase SLT domain KAB03_03904 PF00239 Resolvase, N terminal domain KAB03_03904 PF02796 Helix-turn-helix domain of resolvase KAB03_03913 PF08751 TrwC relaxase KAB03_03913 PF18340 DNA relaxase TraI 2B/2B-like domain KAB03_03913 PF07057 DNA helicase TraI KAB03_03913 PF18272 single-stranded DNA binding TraI N-terminal subdomain