locus-tag class description KAB04_00001 PF00308 Bacterial dnaA protein KAB04_00001 PF08299 Bacterial dnaA protein helix-turn-helix KAB04_00001 PF11638 DnaA N-terminal domain KAB04_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB04_00002 PF02767 DNA polymerase III beta subunit, central domain KAB04_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB04_00003 PF02463 RecF/RecN/SMC N terminal domain KAB04_00004 PF18053 DNA gyrase B subunit insert domain KAB04_00004 PF00986 DNA gyrase B subunit, carboxyl terminus KAB04_00004 PF00204 DNA gyrase B KAB04_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00004 PF01751 Toprim domain KAB04_00006 PF09335 SNARE associated Golgi protein KAB04_00007 PF12848 ABC transporter KAB04_00007 PF00005 ABC transporter KAB04_00011 PF01521 Iron-sulphur cluster biosynthesis KAB04_00012 PF00561 alpha/beta hydrolase fold KAB04_00013 PF03702 Anhydro-N-acetylmuramic acid kinase KAB04_00014 PF00579 tRNA synthetases class I (W and Y) KAB04_00022 PF00209 Sodium:neurotransmitter symporter family KAB04_00026 PF01029 NusB family KAB04_00026 PF01189 16S rRNA methyltransferase RsmB/F KAB04_00027 PF02911 Formyl transferase, C-terminal domain KAB04_00027 PF00551 Formyl transferase KAB04_00028 PF00920 Dehydratase family KAB04_00031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00031 PF03466 LysR substrate binding domain KAB04_00032 PF00860 Permease family KAB04_00033 PF00311 Phosphoenolpyruvate carboxylase KAB04_00034 PF00440 Bacterial regulatory proteins, tetR family KAB04_00034 PF08361 MAATS-type transcriptional repressor, C-terminal region KAB04_00035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_00036 PF00873 AcrB/AcrD/AcrF family KAB04_00038 PF00684 DnaJ central domain KAB04_00038 PF01556 DnaJ C terminal domain KAB04_00038 PF00226 DnaJ domain KAB04_00040 PF05173 Dihydrodipicolinate reductase, C-terminus KAB04_00040 PF01113 Dihydrodipicolinate reductase, N-terminus KAB04_00042 PF07690 Major Facilitator Superfamily KAB04_00043 PF00248 Aldo/keto reductase family KAB04_00044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00044 PF03466 LysR substrate binding domain KAB04_00046 PF00155 Aminotransferase class I and II KAB04_00046 PF00392 Bacterial regulatory proteins, gntR family KAB04_00047 PF00107 Zinc-binding dehydrogenase KAB04_00047 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_00048 PF03352 Methyladenine glycosylase KAB04_00051 PF10576 Iron-sulfur binding domain of endonuclease III KAB04_00051 PF00633 Helix-hairpin-helix motif KAB04_00051 PF14815 NUDIX domain KAB04_00051 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB04_00054 PF07043 Protein of unknown function (DUF1328) KAB04_00055 PF03692 Putative zinc- or iron-chelating domain KAB04_00056 PF07995 Glucose / Sorbosone dehydrogenase KAB04_00057 PF00004 ATPase family associated with various cellular activities (AAA) KAB04_00057 PF12002 MgsA AAA+ ATPase C terminal KAB04_00057 PF16193 AAA C-terminal domain KAB04_00058 PF01226 Formate/nitrite transporter KAB04_00060 PF01259 SAICAR synthetase KAB04_00062 PF00701 Dihydrodipicolinate synthetase family KAB04_00063 PF00857 Isochorismatase family KAB04_00064 PF01758 Sodium Bile acid symporter family KAB04_00065 PF01554 MatE KAB04_00066 PF04463 Protein of unknown function (DUF523) KAB04_00067 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB04_00069 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB04_00070 PF14497 Glutathione S-transferase, C-terminal domain KAB04_00070 PF02798 Glutathione S-transferase, N-terminal domain KAB04_00072 PF00324 Amino acid permease KAB04_00074 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB04_00074 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB04_00076 PF07702 UTRA domain KAB04_00076 PF00392 Bacterial regulatory proteins, gntR family KAB04_00077 PF05962 HutD KAB04_00078 PF17391 Urocanase N-terminal domain KAB04_00078 PF17392 Urocanase C-terminal domain KAB04_00078 PF01175 Urocanase Rossmann-like domain KAB04_00079 PF00221 Aromatic amino acid lyase KAB04_00080 PF00324 Amino acid permease KAB04_00081 PF01979 Amidohydrolase family KAB04_00082 PF00491 Arginase family KAB04_00085 PF01177 Asp/Glu/Hydantoin racemase KAB04_00086 PF01380 SIS domain KAB04_00087 PF12804 MobA-like NTP transferase domain KAB04_00087 PF14602 Hexapeptide repeat of succinyl-transferase KAB04_00087 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_00088 PF04608 Phosphatidylglycerophosphatase A KAB04_00089 PF02769 AIR synthase related protein, C-terminal domain KAB04_00089 PF00586 AIR synthase related protein, N-terminal domain KAB04_00090 PF01029 NusB family KAB04_00091 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAB04_00092 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB04_00092 PF00925 GTP cyclohydrolase II KAB04_00097 PF02580 D-Tyr-tRNA(Tyr) deacylase KAB04_00098 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB04_00098 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAB04_00099 PF00581 Rhodanese-like domain KAB04_00100 PF02666 Phosphatidylserine decarboxylase KAB04_00101 PF03069 Acetamidase/Formamidase family KAB04_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00105 PF11808 Phosphate regulon sensor protein PhoR KAB04_00105 PF00512 His Kinase A (phospho-acceptor) domain KAB04_00105 PF00989 PAS fold KAB04_00106 PF00072 Response regulator receiver domain KAB04_00106 PF00486 Transcriptional regulatory protein, C terminal KAB04_00108 PF00106 short chain dehydrogenase KAB04_00109 PF01554 MatE KAB04_00110 PF00155 Aminotransferase class I and II KAB04_00111 PF04286 Protein of unknown function (DUF445) KAB04_00114 PF04262 Glutamate-cysteine ligase KAB04_00115 PF02600 Disulfide bond formation protein DsbB KAB04_00116 PF04717 Type VI secretion system, phage-baseplate injector KAB04_00117 PF01476 LysM domain KAB04_00117 PF00877 NlpC/P60 family KAB04_00120 PF05728 Uncharacterised protein family (UPF0227) KAB04_00121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00121 PF01751 Toprim domain KAB04_00121 PF00986 DNA gyrase B subunit, carboxyl terminus KAB04_00121 PF00204 DNA gyrase B KAB04_00122 PF00106 short chain dehydrogenase KAB04_00123 PF04115 Ureidoglycolate lyase KAB04_00124 PF03561 Allantoicase repeat KAB04_00125 PF01494 FAD binding domain KAB04_00127 PF00860 Permease family KAB04_00128 PF00576 HIUase/Transthyretin family KAB04_00134 PF11412 Disulphide bond corrector protein DsbC KAB04_00134 PF02683 Cytochrome C biogenesis protein transmembrane region KAB04_00135 PF00990 Diguanylate cyclase, GGDEF domain KAB04_00135 PF07694 5TMR of 5TMR-LYT KAB04_00136 PF07859 alpha/beta hydrolase fold KAB04_00138 PF03960 ArsC family KAB04_00139 PF03372 Endonuclease/Exonuclease/phosphatase family KAB04_00140 PF00156 Phosphoribosyl transferase domain KAB04_00141 PF07715 TonB-dependent Receptor Plug Domain KAB04_00141 PF00593 TonB dependent receptor KAB04_00143 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KAB04_00143 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KAB04_00144 PF04101 Glycosyltransferase family 28 C-terminal domain KAB04_00144 PF03033 Glycosyltransferase family 28 N-terminal domain KAB04_00145 PF01225 Mur ligase family, catalytic domain KAB04_00145 PF08245 Mur ligase middle domain KAB04_00145 PF02875 Mur ligase family, glutamate ligase domain KAB04_00146 PF07478 D-ala D-ala ligase C-terminus KAB04_00146 PF01820 D-ala D-ala ligase N-terminus KAB04_00147 PF08478 POTRA domain, FtsQ-type KAB04_00147 PF03799 Cell division protein FtsQ KAB04_00148 PF02491 SHS2 domain inserted in FTSA KAB04_00149 PF12327 FtsZ family, C-terminal domain KAB04_00149 PF00091 Tubulin/FtsZ family, GTPase domain KAB04_00150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAB04_00152 PF01551 Peptidase family M23 KAB04_00153 PF00456 Transketolase, thiamine diphosphate binding domain KAB04_00153 PF17831 Pyruvate dehydrogenase E1 component middle domain KAB04_00154 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB04_00154 PF00364 Biotin-requiring enzyme KAB04_00154 PF02817 e3 binding domain KAB04_00156 PF01169 Uncharacterized protein family UPF0016 KAB04_00157 PF07715 TonB-dependent Receptor Plug Domain KAB04_00157 PF00593 TonB dependent receptor KAB04_00158 PF00258 Flavodoxin KAB04_00158 PF01613 Flavin reductase like domain KAB04_00159 PF03692 Putative zinc- or iron-chelating domain KAB04_00160 PF00571 CBS domain KAB04_00160 PF00478 IMP dehydrogenase / GMP reductase domain KAB04_00161 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB04_00161 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB04_00161 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB04_00161 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB04_00162 PF01243 Pyridoxamine 5'-phosphate oxidase KAB04_00162 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KAB04_00163 PF01368 DHH family KAB04_00163 PF17768 RecJ OB domain KAB04_00163 PF02272 DHHA1 domain KAB04_00165 PF00472 RF-1 domain KAB04_00165 PF03462 PCRF domain KAB04_00168 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB04_00169 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAB04_00170 PF04452 RNA methyltransferase KAB04_00171 PF00924 Mechanosensitive ion channel KAB04_00173 PF13193 AMP-binding enzyme C-terminal domain KAB04_00173 PF00501 AMP-binding enzyme KAB04_00173 PF16177 Acetyl-coenzyme A synthetase N-terminus KAB04_00174 PF00857 Isochorismatase family KAB04_00175 PF01037 Lrp/AsnC ligand binding domain KAB04_00176 PF00872 Transposase, Mutator family KAB04_00177 PF00296 Luciferase-like monooxygenase KAB04_00178 PF03358 NADPH-dependent FMN reductase KAB04_00179 PF00196 Bacterial regulatory proteins, luxR family KAB04_00179 PF00072 Response regulator receiver domain KAB04_00181 PF00072 Response regulator receiver domain KAB04_00181 PF00672 HAMP domain KAB04_00181 PF00512 His Kinase A (phospho-acceptor) domain KAB04_00181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00181 PF01627 Hpt domain KAB04_00182 PF04341 Protein of unknown function, DUF485 KAB04_00183 PF00474 Sodium:solute symporter family KAB04_00185 PF02028 BCCT, betaine/carnitine/choline family transporter KAB04_00187 PF17158 Membrane-associated sensor, integral membrane domain KAB04_00187 PF00990 Diguanylate cyclase, GGDEF domain KAB04_00189 PF17755 UvrA DNA-binding domain KAB04_00189 PF00005 ABC transporter KAB04_00189 PF17760 UvrA interaction domain KAB04_00190 PF00440 Bacterial regulatory proteins, tetR family KAB04_00190 PF16925 Tetracyclin repressor-like, C-terminal domain KAB04_00191 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_00191 PF00107 Zinc-binding dehydrogenase KAB04_00193 PF06942 GlpM protein KAB04_00194 PF02581 Thiamine monophosphate synthase KAB04_00194 PF03070 TENA/THI-4/PQQC family KAB04_00194 PF08543 Phosphomethylpyrimidine kinase KAB04_00196 PF07690 Major Facilitator Superfamily KAB04_00197 PF00436 Single-strand binding protein family KAB04_00199 PF03591 AzlC protein KAB04_00201 PF00324 Amino acid permease KAB04_00202 PF00155 Aminotransferase class I and II KAB04_00202 PF00392 Bacterial regulatory proteins, gntR family KAB04_00203 PF00202 Aminotransferase class-III KAB04_00204 PF00171 Aldehyde dehydrogenase family KAB04_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00206 PF00857 Isochorismatase family KAB04_00207 PF05726 Pirin C-terminal cupin domain KAB04_00207 PF02678 Pirin KAB04_00208 PF01593 Flavin containing amine oxidoreductase KAB04_00213 PF07690 Major Facilitator Superfamily KAB04_00214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00214 PF03466 LysR substrate binding domain KAB04_00218 PF00248 Aldo/keto reductase family KAB04_00219 PF02311 AraC-like ligand binding domain KAB04_00219 PF12833 Helix-turn-helix domain KAB04_00224 PF01638 HxlR-like helix-turn-helix KAB04_00225 PF02525 Flavodoxin-like fold KAB04_00229 PF02705 K+ potassium transporter KAB04_00234 PF00230 Major intrinsic protein KAB04_00237 PF00977 Histidine biosynthesis protein KAB04_00238 PF01636 Phosphotransferase enzyme family KAB04_00241 PF03992 Antibiotic biosynthesis monooxygenase KAB04_00244 PF00977 Histidine biosynthesis protein KAB04_00247 PF00117 Glutamine amidotransferase class-I KAB04_00248 PF00475 Imidazoleglycerol-phosphate dehydratase KAB04_00252 PF00583 Acetyltransferase (GNAT) family KAB04_00253 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KAB04_00253 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KAB04_00254 PF00672 HAMP domain KAB04_00254 PF00512 His Kinase A (phospho-acceptor) domain KAB04_00254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00255 PF00486 Transcriptional regulatory protein, C terminal KAB04_00255 PF00072 Response regulator receiver domain KAB04_00256 PF16921 Tex protein YqgF-like domain KAB04_00256 PF17674 HHH domain KAB04_00256 PF09371 Tex-like protein N-terminal domain KAB04_00256 PF00575 S1 RNA binding domain KAB04_00257 PF01740 STAS domain KAB04_00257 PF00916 Sulfate permease family KAB04_00258 PF00106 short chain dehydrogenase KAB04_00259 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB04_00260 PF00005 ABC transporter KAB04_00260 PF12848 ABC transporter KAB04_00265 PF04191 Phospholipid methyltransferase KAB04_00268 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_00268 PF00529 HlyD membrane-fusion protein of T1SS KAB04_00269 PF00873 AcrB/AcrD/AcrF family KAB04_00270 PF01545 Cation efflux family KAB04_00276 PF00324 Amino acid permease KAB04_00279 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB04_00282 PF01795 MraW methylase family KAB04_00284 PF00905 Penicillin binding protein transpeptidase domain KAB04_00284 PF03717 Penicillin-binding Protein dimerisation domain KAB04_00285 PF08245 Mur ligase middle domain KAB04_00285 PF02875 Mur ligase family, glutamate ligase domain KAB04_00285 PF01225 Mur ligase family, catalytic domain KAB04_00286 PF08245 Mur ligase middle domain KAB04_00286 PF01225 Mur ligase family, catalytic domain KAB04_00286 PF02875 Mur ligase family, glutamate ligase domain KAB04_00287 PF00953 Glycosyl transferase family 4 KAB04_00289 PF13847 Methyltransferase domain KAB04_00290 PF17092 Penicillin-binding protein OB-like domain KAB04_00290 PF00905 Penicillin binding protein transpeptidase domain KAB04_00290 PF00912 Transglycosylase KAB04_00295 PF03958 Bacterial type II/III secretion system short domain KAB04_00295 PF00263 Bacterial type II and III secretion system protein KAB04_00295 PF11741 AMIN domain KAB04_00295 PF07660 Secretin and TonB N terminus short domain KAB04_00298 PF03958 Bacterial type II/III secretion system short domain KAB04_00298 PF07660 Secretin and TonB N terminus short domain KAB04_00298 PF00263 Bacterial type II and III secretion system protein KAB04_00298 PF11741 AMIN domain KAB04_00299 PF01202 Shikimate kinase KAB04_00300 PF01761 3-dehydroquinate synthase KAB04_00302 PF01493 GXGXG motif KAB04_00302 PF01645 Conserved region in glutamate synthase KAB04_00302 PF04898 Glutamate synthase central domain KAB04_00302 PF00310 Glutamine amidotransferases class-II KAB04_00303 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAB04_00303 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_00305 PF04011 LemA family KAB04_00306 PF04536 TPM domain KAB04_00308 PF07963 Prokaryotic N-terminal methylation motif KAB04_00308 PF00114 Pilin (bacterial filament) KAB04_00310 PF11846 Virulence factor membrane-bound polymerase, C-terminal KAB04_00310 PF04932 O-Antigen ligase KAB04_00310 PF15864 Protein glycosylation ligase KAB04_00311 PF00210 Ferritin-like domain KAB04_00312 PF04324 BFD-like [2Fe-2S] binding domain KAB04_00313 PF01042 Endoribonuclease L-PSP KAB04_00314 PF04607 Region found in RelA / SpoT proteins KAB04_00314 PF02824 TGS domain KAB04_00314 PF13291 ACT domain KAB04_00315 PF01192 RNA polymerase Rpb6 KAB04_00316 PF00625 Guanylate kinase KAB04_00317 PF02401 LytB protein KAB04_00325 PF00886 Ribosomal protein S16 KAB04_00326 PF01782 RimM N-terminal domain KAB04_00326 PF05239 PRC-barrel domain KAB04_00327 PF01746 tRNA (Guanine-1)-methyltransferase KAB04_00328 PF01245 Ribosomal protein L19 KAB04_00329 PF00561 alpha/beta hydrolase fold KAB04_00330 PF03280 Proteobacterial lipase chaperone protein KAB04_00331 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAB04_00331 PF09157 Pseudouridine synthase II TruB, C-terminal KAB04_00331 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAB04_00332 PF01925 Sulfite exporter TauE/SafE KAB04_00334 PF00892 EamA-like transporter family KAB04_00335 PF00892 EamA-like transporter family KAB04_00336 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB04_00336 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB04_00337 PF01565 FAD binding domain KAB04_00337 PF02913 FAD linked oxidases, C-terminal domain KAB04_00339 PF03992 Antibiotic biosynthesis monooxygenase KAB04_00340 PF02525 Flavodoxin-like fold KAB04_00342 PF07690 Major Facilitator Superfamily KAB04_00343 PF12805 FUSC-like inner membrane protein yccS KAB04_00344 PF00080 Copper/zinc superoxide dismutase (SODC) KAB04_00345 PF01594 AI-2E family transporter KAB04_00352 PF00324 Amino acid permease KAB04_00353 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB04_00353 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB04_00354 PF00202 Aminotransferase class-III KAB04_00355 PF04958 Arginine N-succinyltransferase beta subunit KAB04_00356 PF00171 Aldehyde dehydrogenase family KAB04_00357 PF04996 Succinylarginine dihydrolase KAB04_00358 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KAB04_00364 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00364 PF03466 LysR substrate binding domain KAB04_00365 PF00892 EamA-like transporter family KAB04_00367 PF02092 Glycyl-tRNA synthetase beta subunit KAB04_00367 PF05746 DALR anticodon binding domain KAB04_00368 PF02091 Glycyl-tRNA synthetase alpha subunit KAB04_00373 PF00571 CBS domain KAB04_00374 PF04024 PspC domain KAB04_00376 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_00376 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_00376 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB04_00376 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_00378 PF08501 Shikimate dehydrogenase substrate binding domain KAB04_00378 PF01488 Shikimate / quinate 5-dehydrogenase KAB04_00378 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAB04_00379 PF01218 Coproporphyrinogen III oxidase KAB04_00380 PF00925 GTP cyclohydrolase II KAB04_00381 PF02779 Transketolase, pyrimidine binding domain KAB04_00381 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAB04_00381 PF02780 Transketolase, C-terminal domain KAB04_00382 PF00459 Inositol monophosphatase family KAB04_00383 PF12343 Cold shock protein DEAD box A KAB04_00383 PF03880 DbpA RNA binding domain KAB04_00383 PF00271 Helicase conserved C-terminal domain KAB04_00383 PF00270 DEAD/DEAH box helicase KAB04_00384 PF00005 ABC transporter KAB04_00385 PF02405 Permease MlaE KAB04_00387 PF05494 MlaC protein KAB04_00389 PF01544 CorA-like Mg2+ transporter protein KAB04_00390 PF03641 Possible lysine decarboxylase KAB04_00391 PF00293 NUDIX domain KAB04_00392 PF00156 Phosphoribosyl transferase domain KAB04_00393 PF00270 DEAD/DEAH box helicase KAB04_00393 PF00271 Helicase conserved C-terminal domain KAB04_00393 PF17191 RecG wedge domain KAB04_00396 PF01553 Acyltransferase KAB04_00398 PF00375 Sodium:dicarboxylate symporter family KAB04_00400 PF01926 50S ribosome-binding GTPase KAB04_00401 PF02082 Transcriptional regulator KAB04_00402 PF00970 Oxidoreductase FAD-binding domain KAB04_00402 PF00042 Globin KAB04_00402 PF00175 Oxidoreductase NAD-binding domain KAB04_00403 PF05872 Bacterial protein of unknown function (DUF853) KAB04_00404 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB04_00405 PF00117 Glutamine amidotransferase class-I KAB04_00406 PF00338 Ribosomal protein S10p/S20e KAB04_00407 PF00297 Ribosomal protein L3 KAB04_00408 PF00573 Ribosomal protein L4/L1 family KAB04_00409 PF00276 Ribosomal protein L23 KAB04_00410 PF00181 Ribosomal Proteins L2, RNA binding domain KAB04_00410 PF03947 Ribosomal Proteins L2, C-terminal domain KAB04_00411 PF00203 Ribosomal protein S19 KAB04_00412 PF00237 Ribosomal protein L22p/L17e KAB04_00413 PF07650 KH domain KAB04_00413 PF00189 Ribosomal protein S3, C-terminal domain KAB04_00414 PF00252 Ribosomal protein L16p/L10e KAB04_00415 PF00831 Ribosomal L29 protein KAB04_00416 PF00366 Ribosomal protein S17 KAB04_00417 PF00238 Ribosomal protein L14p/L23e KAB04_00418 PF00467 KOW motif KAB04_00418 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAB04_00419 PF00281 Ribosomal protein L5 KAB04_00419 PF00673 ribosomal L5P family C-terminus KAB04_00420 PF00253 Ribosomal protein S14p/S29e KAB04_00421 PF00410 Ribosomal protein S8 KAB04_00422 PF00347 Ribosomal protein L6 KAB04_00423 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAB04_00424 PF03719 Ribosomal protein S5, C-terminal domain KAB04_00424 PF00333 Ribosomal protein S5, N-terminal domain KAB04_00425 PF00327 Ribosomal protein L30p/L7e KAB04_00426 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAB04_00427 PF00344 SecY translocase KAB04_00428 PF00444 Ribosomal protein L36 KAB04_00429 PF00416 Ribosomal protein S13/S18 KAB04_00430 PF00411 Ribosomal protein S11 KAB04_00431 PF00163 Ribosomal protein S4/S9 N-terminal domain KAB04_00431 PF01479 S4 domain KAB04_00432 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAB04_00432 PF01000 RNA polymerase Rpb3/RpoA insert domain KAB04_00432 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAB04_00433 PF01196 Ribosomal protein L17 KAB04_00434 PF00743 Flavin-binding monooxygenase-like KAB04_00435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_00435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_00435 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_00436 PF03937 Flavinator of succinate dehydrogenase KAB04_00443 PF09526 Probable metal-binding protein (DUF2387) KAB04_00444 PF01432 Peptidase family M3 KAB04_00445 PF00575 S1 RNA binding domain KAB04_00445 PF00773 RNB domain KAB04_00445 PF08461 Ribonuclease R winged-helix domain KAB04_00445 PF08206 Ribonuclease B OB domain KAB04_00445 PF17876 Cold shock domain KAB04_00454 PF01557 Fumarylacetoacetate (FAA) hydrolase family KAB04_00455 PF12833 Helix-turn-helix domain KAB04_00456 PF00892 EamA-like transporter family KAB04_00457 PF03631 Virulence factor BrkB KAB04_00458 PF03358 NADPH-dependent FMN reductase KAB04_00463 PF02130 Uncharacterized protein family UPF0054 KAB04_00464 PF02562 PhoH-like protein KAB04_00465 PF00919 Uncharacterized protein family UPF0004 KAB04_00465 PF04055 Radical SAM superfamily KAB04_00465 PF01938 TRAM domain KAB04_00466 PF10145 Phage-related minor tail protein KAB04_00466 PF01464 Transglycosylase SLT domain KAB04_00466 PF01551 Peptidase family M23 KAB04_00468 PF00056 lactate/malate dehydrogenase, NAD binding domain KAB04_00468 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KAB04_00472 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KAB04_00473 PF01066 CDP-alcohol phosphatidyltransferase KAB04_00482 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_00482 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_00482 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_00483 PF00440 Bacterial regulatory proteins, tetR family KAB04_00483 PF17932 Tetracyclin repressor-like, C-terminal domain KAB04_00486 PF01039 Carboxyl transferase domain KAB04_00487 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_00487 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_00487 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_00489 PF00289 Biotin carboxylase, N-terminal domain KAB04_00489 PF00364 Biotin-requiring enzyme KAB04_00489 PF02785 Biotin carboxylase C-terminal domain KAB04_00489 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB04_00491 PF04386 Stringent starvation protein B KAB04_00492 PF13417 Glutathione S-transferase, N-terminal domain KAB04_00492 PF00043 Glutathione S-transferase, C-terminal domain KAB04_00493 PF00380 Ribosomal protein S9/S16 KAB04_00494 PF00572 Ribosomal protein L13 KAB04_00495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KAB04_00496 PF00398 Ribosomal RNA adenine dimethylase KAB04_00497 PF00149 Calcineurin-like phosphoesterase KAB04_00501 PF01926 50S ribosome-binding GTPase KAB04_00501 PF13167 GTP-binding GTPase N-terminal KAB04_00501 PF16360 GTP-binding GTPase Middle Region KAB04_00503 PF13091 PLD-like domain KAB04_00504 PF10518 TAT (twin-arginine translocation) pathway signal sequence KAB04_00504 PF00149 Calcineurin-like phosphoesterase KAB04_00505 PF01389 OmpA-like transmembrane domain KAB04_00505 PF00691 OmpA family KAB04_00506 PF00990 Diguanylate cyclase, GGDEF domain KAB04_00506 PF17152 Periplasmic sensor domain KAB04_00513 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB04_00513 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_00515 PF04273 Putative phosphatase (DUF442) KAB04_00515 PF00753 Metallo-beta-lactamase superfamily KAB04_00516 PF00561 alpha/beta hydrolase fold KAB04_00517 PF00085 Thioredoxin KAB04_00518 PF03061 Thioesterase superfamily KAB04_00520 PF04461 Protein of unknown function (DUF520) KAB04_00522 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB04_00522 PF01266 FAD dependent oxidoreductase KAB04_00524 PF03795 YCII-related domain KAB04_00525 PF04279 Intracellular septation protein A KAB04_00526 PF02811 PHP domain KAB04_00527 PF01062 Bestrophin, RFP-TM, chloride channel KAB04_00528 PF04002 RadC-like JAB domain KAB04_00529 PF04127 DNA / pantothenate metabolism flavoprotein KAB04_00529 PF02441 Flavoprotein KAB04_00530 PF02355 Protein export membrane protein KAB04_00530 PF07549 SecD/SecF GG Motif KAB04_00531 PF07549 SecD/SecF GG Motif KAB04_00531 PF13721 SecD export protein N-terminal TM region KAB04_00531 PF02355 Protein export membrane protein KAB04_00532 PF02699 Preprotein translocase subunit KAB04_00533 PF01702 Queuine tRNA-ribosyltransferase KAB04_00536 PF02547 Queuosine biosynthesis protein KAB04_00538 PF00512 His Kinase A (phospho-acceptor) domain KAB04_00538 PF07689 KaiB domain KAB04_00538 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00539 PF08335 GlnD PII-uridylyltransferase KAB04_00539 PF03710 Glutamate-ammonia ligase adenylyltransferase KAB04_00540 PF01063 Amino-transferase class IV KAB04_00543 PF01522 Polysaccharide deacetylase KAB04_00544 PF00535 Glycosyl transferase family 2 KAB04_00545 PF00534 Glycosyl transferases group 1 KAB04_00545 PF13439 Glycosyltransferase Family 4 KAB04_00550 PF17101 Stealth protein CR1, conserved region 1 KAB04_00550 PF11380 Stealth protein CR2, conserved region 2 KAB04_00550 PF17102 Stealth protein CR3, conserved region 3 KAB04_00551 PF02938 GAD domain KAB04_00551 PF00152 tRNA synthetases class II (D, K and N) KAB04_00551 PF01336 OB-fold nucleic acid binding domain KAB04_00553 PF00593 TonB dependent receptor KAB04_00553 PF07715 TonB-dependent Receptor Plug Domain KAB04_00557 PF06146 Phosphate-starvation-inducible E KAB04_00558 PF02798 Glutathione S-transferase, N-terminal domain KAB04_00558 PF00043 Glutathione S-transferase, C-terminal domain KAB04_00559 PF03466 LysR substrate binding domain KAB04_00559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00560 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB04_00560 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_00560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_00560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_00561 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_00561 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_00561 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB04_00561 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_00563 PF00512 His Kinase A (phospho-acceptor) domain KAB04_00563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00563 PF00672 HAMP domain KAB04_00564 PF00486 Transcriptional regulatory protein, C terminal KAB04_00564 PF00072 Response regulator receiver domain KAB04_00565 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KAB04_00569 PF01923 Cobalamin adenosyltransferase KAB04_00570 PF00593 TonB dependent receptor KAB04_00570 PF07715 TonB-dependent Receptor Plug Domain KAB04_00571 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAB04_00572 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_00577 PF00290 Tryptophan synthase alpha chain KAB04_00578 PF01039 Carboxyl transferase domain KAB04_00579 PF02875 Mur ligase family, glutamate ligase domain KAB04_00579 PF08245 Mur ligase middle domain KAB04_00582 PF00753 Metallo-beta-lactamase superfamily KAB04_00583 PF00578 AhpC/TSA family KAB04_00583 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB04_00584 PF07517 SecA DEAD-like domain KAB04_00584 PF07516 SecA Wing and Scaffold domain KAB04_00584 PF01043 SecA preprotein cross-linking domain KAB04_00584 PF02810 SEC-C motif KAB04_00586 PF00083 Sugar (and other) transporter KAB04_00586 PF07690 Major Facilitator Superfamily KAB04_00587 PF03006 Haemolysin-III related KAB04_00593 PF00378 Enoyl-CoA hydratase/isomerase KAB04_00593 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB04_00593 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB04_00594 PF00108 Thiolase, N-terminal domain KAB04_00594 PF02803 Thiolase, C-terminal domain KAB04_00595 PF12833 Helix-turn-helix domain KAB04_00595 PF02311 AraC-like ligand binding domain KAB04_00596 PF02515 CoA-transferase family III KAB04_00597 PF04966 Carbohydrate-selective porin, OprB family KAB04_00598 PF01011 PQQ enzyme repeat KAB04_00599 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB04_00599 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB04_00601 PF00893 Small Multidrug Resistance protein KAB04_00603 PF00108 Thiolase, N-terminal domain KAB04_00603 PF02803 Thiolase, C-terminal domain KAB04_00605 PF00691 OmpA family KAB04_00605 PF13505 Outer membrane protein beta-barrel domain KAB04_00607 PF01139 tRNA-splicing ligase RtcB KAB04_00608 PF00324 Amino acid permease KAB04_00609 PF05175 Methyltransferase small domain KAB04_00609 PF08468 Methyltransferase small domain N-terminal KAB04_00610 PF00860 Permease family KAB04_00612 PF01741 Large-conductance mechanosensitive channel, MscL KAB04_00615 PF06827 Zinc finger found in FPG and IleRS KAB04_00615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KAB04_00615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB04_00616 PF02245 Methylpurine-DNA glycosylase (MPG) KAB04_00617 PF00593 TonB dependent receptor KAB04_00617 PF07715 TonB-dependent Receptor Plug Domain KAB04_00620 PF00593 TonB dependent receptor KAB04_00620 PF07715 TonB-dependent Receptor Plug Domain KAB04_00621 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB04_00622 PF03547 Membrane transport protein KAB04_00624 PF13098 Thioredoxin-like domain KAB04_00624 PF10411 Disulfide bond isomerase protein N-terminus KAB04_00625 PF01571 Aminomethyltransferase folate-binding domain KAB04_00627 PF04343 Protein of unknown function, DUF488 KAB04_00628 PF08274 PhnA Zinc-Ribbon KAB04_00628 PF03831 PhnA domain KAB04_00629 PF07411 Domain of unknown function (DUF1508) KAB04_00630 PF04073 Aminoacyl-tRNA editing domain KAB04_00630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB04_00630 PF03129 Anticodon binding domain KAB04_00631 PF00873 AcrB/AcrD/AcrF family KAB04_00634 PF00072 Response regulator receiver domain KAB04_00635 PF00072 Response regulator receiver domain KAB04_00636 PF01584 CheW-like domain KAB04_00637 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KAB04_00637 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAB04_00638 PF01627 Hpt domain KAB04_00638 PF02895 Signal transducing histidine kinase, homodimeric domain KAB04_00638 PF01584 CheW-like domain KAB04_00638 PF07194 P2 response regulator binding domain KAB04_00638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00638 PF02895 Signal transducing histidine kinase, homodimeric domain KAB04_00638 PF01584 CheW-like domain KAB04_00638 PF07194 P2 response regulator binding domain KAB04_00638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00638 PF01627 Hpt domain KAB04_00639 PF00072 Response regulator receiver domain KAB04_00641 PF07687 Peptidase dimerisation domain KAB04_00641 PF01546 Peptidase family M20/M25/M40 KAB04_00642 PF08085 Entericidin EcnA/B family KAB04_00644 PF04304 Protein of unknown function (DUF454) KAB04_00645 PF17969 L,D-transpeptidase C-terminal domain KAB04_00645 PF03734 L,D-transpeptidase catalytic domain KAB04_00653 PF00175 Oxidoreductase NAD-binding domain KAB04_00653 PF00258 Flavodoxin KAB04_00653 PF00667 FAD binding domain KAB04_00655 PF12805 FUSC-like inner membrane protein yccS KAB04_00656 PF07690 Major Facilitator Superfamily KAB04_00657 PF00881 Nitroreductase family KAB04_00659 PF01235 Sodium:alanine symporter family KAB04_00660 PF01734 Patatin-like phospholipase KAB04_00661 PF13291 ACT domain KAB04_00661 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_00662 PF05992 SbmA/BacA-like family KAB04_00668 PF02637 GatB domain KAB04_00668 PF02934 GatB/GatE catalytic domain KAB04_00669 PF01425 Amidase KAB04_00670 PF02686 Glu-tRNAGln amidotransferase C subunit KAB04_00672 PF04085 rod shape-determining protein MreC KAB04_00673 PF04093 rod shape-determining protein MreD KAB04_00674 PF02545 Maf-like protein KAB04_00675 PF00575 S1 RNA binding domain KAB04_00675 PF10150 Ribonuclease E/G family KAB04_00677 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KAB04_00677 PF06974 Protein of unknown function (DUF1298) KAB04_00678 PF01507 Phosphoadenosine phosphosulfate reductase family KAB04_00681 PF02525 Flavodoxin-like fold KAB04_00685 PF02673 Bacitracin resistance protein BacA KAB04_00686 PF12833 Helix-turn-helix domain KAB04_00686 PF06719 AraC-type transcriptional regulator N-terminus KAB04_00687 PF09277 Erythronolide synthase, docking KAB04_00687 PF16197 Ketoacyl-synthetase C-terminal extension KAB04_00687 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_00687 PF08990 Erythronolide synthase docking KAB04_00687 PF00550 Phosphopantetheine attachment site KAB04_00687 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_00687 PF00698 Acyl transferase domain KAB04_00687 PF14765 Polyketide synthase dehydratase KAB04_00687 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_00687 PF08659 KR domain KAB04_00688 PF01965 DJ-1/PfpI family KAB04_00690 PF00324 Amino acid permease KAB04_00691 PF04303 PrpF protein KAB04_00692 PF00348 Polyprenyl synthetase KAB04_00693 PF04237 YjbR KAB04_00694 PF01145 SPFH domain / Band 7 family KAB04_00696 PF01734 Patatin-like phospholipase KAB04_00700 PF00884 Sulfatase KAB04_00700 PF08019 Phosphoethanolamine transferase EptA/EptB KAB04_00701 PF00486 Transcriptional regulatory protein, C terminal KAB04_00701 PF00072 Response regulator receiver domain KAB04_00702 PF08521 Two-component sensor kinase N-terminal KAB04_00702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_00702 PF00512 His Kinase A (phospho-acceptor) domain KAB04_00704 PF00909 Ammonium Transporter Family KAB04_00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00705 PF03466 LysR substrate binding domain KAB04_00709 PF00133 tRNA synthetases class I (I, L, M and V) KAB04_00709 PF10458 Valyl tRNA synthetase tRNA binding arm KAB04_00709 PF08264 Anticodon-binding domain of tRNA KAB04_00713 PF01906 Putative heavy-metal-binding KAB04_00714 PF01906 Putative heavy-metal-binding KAB04_00715 PF02321 Outer membrane efflux protein KAB04_00716 PF00873 AcrB/AcrD/AcrF family KAB04_00717 PF00529 HlyD membrane-fusion protein of T1SS KAB04_00717 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_00718 PF01569 PAP2 superfamily KAB04_00720 PF00348 Polyprenyl synthetase KAB04_00721 PF00829 Ribosomal prokaryotic L21 protein KAB04_00722 PF01016 Ribosomal L27 protein KAB04_00723 PF03548 Outer membrane lipoprotein carrier protein LolA KAB04_00725 PF02403 Seryl-tRNA synthetase N-terminal domain KAB04_00725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB04_00726 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB04_00726 PF10414 Sirohaem synthase dimerisation region KAB04_00726 PF14824 Sirohaem biosynthesis protein central KAB04_00727 PF10414 Sirohaem synthase dimerisation region KAB04_00727 PF14824 Sirohaem biosynthesis protein central KAB04_00727 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB04_00728 PF00588 SpoU rRNA Methylase family KAB04_00729 PF03358 NADPH-dependent FMN reductase KAB04_00730 PF03358 NADPH-dependent FMN reductase KAB04_00731 PF02321 Outer membrane efflux protein KAB04_00732 PF02321 Outer membrane efflux protein KAB04_00733 PF00873 AcrB/AcrD/AcrF family KAB04_00734 PF00873 AcrB/AcrD/AcrF family KAB04_00735 PF00873 AcrB/AcrD/AcrF family KAB04_00736 PF00873 AcrB/AcrD/AcrF family KAB04_00737 PF00873 AcrB/AcrD/AcrF family KAB04_00738 PF00873 AcrB/AcrD/AcrF family KAB04_00739 PF00873 AcrB/AcrD/AcrF family KAB04_00740 PF00873 AcrB/AcrD/AcrF family KAB04_00741 PF00873 AcrB/AcrD/AcrF family KAB04_00742 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_00742 PF00529 HlyD membrane-fusion protein of T1SS KAB04_00743 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_00743 PF00529 HlyD membrane-fusion protein of T1SS KAB04_00744 PF01569 PAP2 superfamily KAB04_00746 PF00348 Polyprenyl synthetase KAB04_00747 PF00829 Ribosomal prokaryotic L21 protein KAB04_00748 PF01016 Ribosomal L27 protein KAB04_00749 PF03548 Outer membrane lipoprotein carrier protein LolA KAB04_00751 PF02403 Seryl-tRNA synthetase N-terminal domain KAB04_00751 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB04_00752 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB04_00752 PF14824 Sirohaem biosynthesis protein central KAB04_00752 PF10414 Sirohaem synthase dimerisation region KAB04_00753 PF00588 SpoU rRNA Methylase family KAB04_00754 PF01638 HxlR-like helix-turn-helix KAB04_00755 PF03358 NADPH-dependent FMN reductase KAB04_00756 PF13520 Amino acid permease KAB04_00757 PF00465 Iron-containing alcohol dehydrogenase KAB04_00759 PF03099 Biotin/lipoate A/B protein ligase family KAB04_00760 PF04359 Protein of unknown function (DUF493) KAB04_00761 PF04546 Sigma-70, non-essential region KAB04_00761 PF03979 Sigma-70 factor, region 1.1 KAB04_00761 PF00140 Sigma-70 factor, region 1.2 KAB04_00761 PF04545 Sigma-70, region 4 KAB04_00761 PF04539 Sigma-70 region 3 KAB04_00761 PF04542 Sigma-70 region 2 KAB04_00767 PF00285 Citrate synthase, C-terminal domain KAB04_00768 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB04_00769 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB04_00770 PF02910 Fumarate reductase flavoprotein C-term KAB04_00770 PF00890 FAD binding domain KAB04_00771 PF13085 2Fe-2S iron-sulfur cluster binding domain KAB04_00772 PF02779 Transketolase, pyrimidine binding domain KAB04_00772 PF16870 2-oxoglutarate dehydrogenase C-terminal KAB04_00772 PF16078 2-oxoglutarate dehydrogenase N-terminus KAB04_00772 PF00676 Dehydrogenase E1 component KAB04_00773 PF02817 e3 binding domain KAB04_00773 PF00364 Biotin-requiring enzyme KAB04_00773 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB04_00774 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_00774 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB04_00775 PF00549 CoA-ligase KAB04_00775 PF08442 ATP-grasp domain KAB04_00776 PF02629 CoA binding domain KAB04_00776 PF00549 CoA-ligase KAB04_00777 PF00579 tRNA synthetases class I (W and Y) KAB04_00778 PF05661 Protein of unknown function (DUF808) KAB04_00779 PF04228 Putative neutral zinc metallopeptidase KAB04_00780 PF00999 Sodium/hydrogen exchanger family KAB04_00784 PF09587 Bacterial capsule synthesis protein PGA_cap KAB04_00786 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB04_00787 PF00582 Universal stress protein family KAB04_00788 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_00789 PF03449 Transcription elongation factor, N-terminal KAB04_00789 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB04_00790 PF02142 MGS-like domain KAB04_00790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB04_00790 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB04_00791 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAB04_00791 PF00117 Glutamine amidotransferase class-I KAB04_00794 PF01985 CRS1 / YhbY (CRM) domain KAB04_00795 PF01728 FtsJ-like methyltransferase KAB04_00796 PF00004 ATPase family associated with various cellular activities (AAA) KAB04_00796 PF06480 FtsH Extracellular KAB04_00796 PF17862 AAA+ lid domain KAB04_00796 PF01434 Peptidase family M41 KAB04_00797 PF00809 Pterin binding enzyme KAB04_00801 PF16655 PhoD-like phosphatase, N-terminal domain KAB04_00801 PF09423 PhoD-like phosphatase KAB04_00804 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAB04_00804 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAB04_00807 PF00083 Sugar (and other) transporter KAB04_00808 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAB04_00808 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAB04_00809 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAB04_00809 PF01266 FAD dependent oxidoreductase KAB04_00810 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KAB04_00810 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KAB04_00811 PF00781 Diacylglycerol kinase catalytic domain KAB04_00812 PF00149 Calcineurin-like phosphoesterase KAB04_00813 PF13737 Transposase DDE domain KAB04_00815 PF00166 Chaperonin 10 Kd subunit KAB04_00816 PF00118 TCP-1/cpn60 chaperonin family KAB04_00817 PF01219 Prokaryotic diacylglycerol kinase KAB04_00819 PF03009 Glycerophosphoryl diester phosphodiesterase family KAB04_00820 PF00873 AcrB/AcrD/AcrF family KAB04_00822 PF01435 Peptidase family M48 KAB04_00823 PF01464 Transglycosylase SLT domain KAB04_00824 PF01171 PP-loop family KAB04_00826 PF01464 Transglycosylase SLT domain KAB04_00826 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB04_00827 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB04_00827 PF03449 Transcription elongation factor, N-terminal KAB04_00830 PF13193 AMP-binding enzyme C-terminal domain KAB04_00830 PF00550 Phosphopantetheine attachment site KAB04_00830 PF00975 Thioesterase domain KAB04_00830 PF00501 AMP-binding enzyme KAB04_00830 PF00668 Condensation domain KAB04_00832 PF13737 Transposase DDE domain KAB04_00834 PF13737 Transposase DDE domain KAB04_00841 PF00216 Bacterial DNA-binding protein KAB04_00847 PF13401 AAA domain KAB04_00847 PF01471 Putative peptidoglycan binding domain KAB04_00853 PF10502 Signal peptidase, peptidase S26 KAB04_00860 PF03237 Terminase-like family KAB04_00863 PF06074 Protein of unknown function (DUF935) KAB04_00864 PF04233 Phage Mu protein F like protein KAB04_00865 PF05069 Phage virion morphogenesis family KAB04_00868 PF10124 Mu-like prophage major head subunit gpT KAB04_00887 PF00881 Nitroreductase family KAB04_00890 PF02595 Glycerate kinase family KAB04_00891 PF00384 Molybdopterin oxidoreductase KAB04_00892 PF02634 FdhD/NarQ family KAB04_00893 PF06803 Protein of unknown function (DUF1232) KAB04_00894 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB04_00894 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB04_00894 PF11890 Domain of unknown function (DUF3410) KAB04_00895 PF00152 tRNA synthetases class II (D, K and N) KAB04_00897 PF18073 Rubredoxin metal binding domain KAB04_00898 PF00324 Amino acid permease KAB04_00900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAB04_00900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAB04_00901 PF01678 Diaminopimelate epimerase KAB04_00902 PF01810 LysE type translocator KAB04_00903 PF00589 Phage integrase family KAB04_00903 PF02899 Phage integrase, N-terminal SAM-like domain KAB04_00904 PF01012 Electron transfer flavoprotein domain KAB04_00905 PF01012 Electron transfer flavoprotein domain KAB04_00905 PF00766 Electron transfer flavoprotein FAD-binding domain KAB04_00906 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB04_00906 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB04_00909 PF00535 Glycosyl transferase family 2 KAB04_00913 PF13533 Biotin-lipoyl like KAB04_00915 PF00266 Aminotransferase class-V KAB04_00918 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KAB04_00920 PF02687 FtsX-like permease family KAB04_00920 PF12704 MacB-like periplasmic core domain KAB04_00921 PF00005 ABC transporter KAB04_00922 PF03772 Competence protein KAB04_00922 PF13567 Domain of unknown function (DUF4131) KAB04_00922 PF00753 Metallo-beta-lactamase superfamily KAB04_00924 PF06965 Na+/H+ antiporter 1 KAB04_00924 PF01343 Peptidase family S49 KAB04_00925 PF12697 Alpha/beta hydrolase family KAB04_00926 PF00551 Formyl transferase KAB04_00927 PF02769 AIR synthase related protein, C-terminal domain KAB04_00927 PF00586 AIR synthase related protein, N-terminal domain KAB04_00928 PF01594 AI-2E family transporter KAB04_00929 PF00308 Bacterial dnaA protein KAB04_00929 PF08299 Bacterial dnaA protein helix-turn-helix KAB04_00929 PF11638 DnaA N-terminal domain KAB04_00935 PF13737 Transposase DDE domain KAB04_00940 PF00588 SpoU rRNA Methylase family KAB04_00940 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB04_00941 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KAB04_00943 PF00691 OmpA family KAB04_00944 PF07676 WD40-like Beta Propeller Repeat KAB04_00944 PF04052 TolB amino-terminal domain KAB04_00946 PF02472 Biopolymer transport protein ExbD/TolR KAB04_00947 PF01618 MotA/TolQ/ExbB proton channel family KAB04_00948 PF03061 Thioesterase superfamily KAB04_00949 PF07687 Peptidase dimerisation domain KAB04_00949 PF01546 Peptidase family M20/M25/M40 KAB04_00950 PF05491 RuvB C-terminal winged helix domain KAB04_00950 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAB04_00950 PF17864 RuvB AAA lid domain KAB04_00951 PF07499 RuvA, C-terminal domain KAB04_00951 PF01330 RuvA N terminal domain KAB04_00952 PF01966 HD domain KAB04_00953 PF02769 AIR synthase related protein, C-terminal domain KAB04_00953 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAB04_00953 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KAB04_00954 PF07690 Major Facilitator Superfamily KAB04_00956 PF01784 NIF3 (NGG1p interacting factor 3) KAB04_00957 PF00378 Enoyl-CoA hydratase/isomerase KAB04_00958 PF01467 Cytidylyltransferase-like KAB04_00958 PF00293 NUDIX domain KAB04_00960 PF00578 AhpC/TSA family KAB04_00963 PF06508 Queuosine biosynthesis protein QueC KAB04_00965 PF14602 Hexapeptide repeat of succinyl-transferase KAB04_00965 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_00965 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KAB04_00967 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_00967 PF03466 LysR substrate binding domain KAB04_00968 PF12857 TOBE-like domain KAB04_00968 PF00005 ABC transporter KAB04_00969 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_00970 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_00973 PF01063 Amino-transferase class IV KAB04_00974 PF02618 YceG-like family KAB04_00975 PF02223 Thymidylate kinase KAB04_00977 PF02910 Fumarate reductase flavoprotein C-term KAB04_00977 PF00890 FAD binding domain KAB04_00978 PF13180 PDZ domain KAB04_00980 PF06421 GTP-binding protein LepA C-terminus KAB04_00980 PF03144 Elongation factor Tu domain 2 KAB04_00980 PF00009 Elongation factor Tu GTP binding domain KAB04_00980 PF00679 Elongation factor G C-terminus KAB04_00981 PF10502 Signal peptidase, peptidase S26 KAB04_00983 PF00035 Double-stranded RNA binding motif KAB04_00983 PF14622 Ribonuclease-III-like KAB04_00984 PF07650 KH domain KAB04_00984 PF01926 50S ribosome-binding GTPase KAB04_00986 PF02565 Recombination protein O C terminal KAB04_00986 PF11967 Recombination protein O N terminal KAB04_00987 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KAB04_00988 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KAB04_00989 PF00106 short chain dehydrogenase KAB04_00996 PF17151 Periplasmic sensor domain KAB04_00996 PF00990 Diguanylate cyclase, GGDEF domain KAB04_00998 PF12344 Ultra-violet resistance protein B KAB04_00998 PF17757 UvrB interaction domain KAB04_00998 PF02151 UvrB/uvrC motif KAB04_00998 PF04851 Type III restriction enzyme, res subunit KAB04_00998 PF00271 Helicase conserved C-terminal domain KAB04_01000 PF00892 EamA-like transporter family KAB04_01003 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB04_01003 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB04_01006 PF01018 GTP1/OBG KAB04_01006 PF01926 50S ribosome-binding GTPase KAB04_01007 PF01472 PUA domain KAB04_01007 PF00696 Amino acid kinase family KAB04_01009 PF07759 Protein of unknown function (DUF1615) KAB04_01010 PF01207 Dihydrouridine synthase (Dus) KAB04_01011 PF03060 Nitronate monooxygenase KAB04_01014 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB04_01020 PF03441 FAD binding domain of DNA photolyase KAB04_01020 PF00875 DNA photolyase KAB04_01021 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB04_01022 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01023 PF07943 Penicillin-binding protein 5, C-terminal domain KAB04_01023 PF00768 D-alanyl-D-alanine carboxypeptidase KAB04_01025 PF03971 Monomeric isocitrate dehydrogenase KAB04_01026 PF00849 RNA pseudouridylate synthase KAB04_01027 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB04_01030 PF06779 Uncharacterised MFS-type transporter YbfB KAB04_01031 PF03466 LysR substrate binding domain KAB04_01031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01033 PF02567 Phenazine biosynthesis-like protein KAB04_01034 PF00675 Insulinase (Peptidase family M16) KAB04_01034 PF05193 Peptidase M16 inactive domain KAB04_01039 PF02581 Thiamine monophosphate synthase KAB04_01040 PF00202 Aminotransferase class-III KAB04_01042 PF00849 RNA pseudouridylate synthase KAB04_01043 PF00271 Helicase conserved C-terminal domain KAB04_01043 PF12137 RNA polymerase recycling family C-terminal KAB04_01043 PF00176 SNF2 family N-terminal domain KAB04_01043 PF18339 RapA N-terminal Tudor like domain 1 KAB04_01043 PF18337 RapA N-terminal Tudor like domain KAB04_01045 PF00440 Bacterial regulatory proteins, tetR family KAB04_01046 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_01046 PF00970 Oxidoreductase FAD-binding domain KAB04_01046 PF00175 Oxidoreductase NAD-binding domain KAB04_01047 PF00487 Fatty acid desaturase KAB04_01049 PF00440 Bacterial regulatory proteins, tetR family KAB04_01049 PF17754 MftR C-terminal domain KAB04_01051 PF00202 Aminotransferase class-III KAB04_01052 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB04_01053 PF00171 Aldehyde dehydrogenase family KAB04_01054 PF01037 Lrp/AsnC ligand binding domain KAB04_01055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB04_01055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB04_01055 PF00205 Thiamine pyrophosphate enzyme, central domain KAB04_01056 PF00324 Amino acid permease KAB04_01057 PF12849 PBP superfamily domain KAB04_01058 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01059 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01060 PF00005 ABC transporter KAB04_01061 PF01343 Peptidase family S49 KAB04_01061 PF08496 Peptidase family S49 N-terminal KAB04_01064 PF08328 Adenylosuccinate lyase C-terminal KAB04_01064 PF00206 Lyase KAB04_01065 PF04356 Protein of unknown function (DUF489) KAB04_01067 PF00293 NUDIX domain KAB04_01067 PF13344 Haloacid dehalogenase-like hydrolase KAB04_01068 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_01069 PF00768 D-alanyl-D-alanine carboxypeptidase KAB04_01069 PF07943 Penicillin-binding protein 5, C-terminal domain KAB04_01072 PF01975 Survival protein SurE KAB04_01073 PF01476 LysM domain KAB04_01073 PF01551 Peptidase family M23 KAB04_01074 PF03466 LysR substrate binding domain KAB04_01074 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01075 PF13654 AAA domain KAB04_01075 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB04_01076 PF07690 Major Facilitator Superfamily KAB04_01077 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB04_01078 PF13593 SBF-like CPA transporter family (DUF4137) KAB04_01079 PF01197 Ribosomal protein L31 KAB04_01082 PF04055 Radical SAM superfamily KAB04_01083 PF01132 Elongation factor P (EF-P) OB domain KAB04_01083 PF09285 Elongation factor P, C-terminal KAB04_01083 PF08207 Elongation factor P (EF-P) KOW-like domain KAB04_01084 PF13722 5TM C-terminal transporter carbon starvation CstA KAB04_01084 PF02554 Carbon starvation protein CstA KAB04_01085 PF04328 Selenoprotein, putative KAB04_01092 PF06018 CodY GAF-like domain KAB04_01092 PF17853 GGDEF-like domain KAB04_01092 PF13556 PucR C-terminal helix-turn-helix domain KAB04_01095 PF00171 Aldehyde dehydrogenase family KAB04_01096 PF00324 Amino acid permease KAB04_01097 PF03466 LysR substrate binding domain KAB04_01097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01098 PF02028 BCCT, betaine/carnitine/choline family transporter KAB04_01099 PF02028 BCCT, betaine/carnitine/choline family transporter KAB04_01100 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB04_01100 PF00355 Rieske [2Fe-2S] domain KAB04_01102 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01102 PF18113 Rubredoxin binding C-terminal domain KAB04_01103 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB04_01103 PF01266 FAD dependent oxidoreductase KAB04_01107 PF00892 EamA-like transporter family KAB04_01109 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KAB04_01110 PF00083 Sugar (and other) transporter KAB04_01111 PF13378 Enolase C-terminal domain-like KAB04_01111 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB04_01112 PF00698 Acyl transferase domain KAB04_01112 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_01112 PF08990 Erythronolide synthase docking KAB04_01112 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_01112 PF09277 Erythronolide synthase, docking KAB04_01112 PF08659 KR domain KAB04_01112 PF16197 Ketoacyl-synthetase C-terminal extension KAB04_01112 PF00550 Phosphopantetheine attachment site KAB04_01112 PF14765 Polyketide synthase dehydratase KAB04_01112 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_01113 PF00440 Bacterial regulatory proteins, tetR family KAB04_01116 PF17954 Quercetinase C-terminal cupin domain KAB04_01116 PF02678 Pirin KAB04_01117 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_01118 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_01119 PF13309 HTH domain KAB04_01119 PF08348 YheO-like PAS domain KAB04_01121 PF00550 Phosphopantetheine attachment site KAB04_01121 PF00668 Condensation domain KAB04_01121 PF00501 AMP-binding enzyme KAB04_01121 PF13193 AMP-binding enzyme C-terminal domain KAB04_01122 PF00550 Phosphopantetheine attachment site KAB04_01122 PF00668 Condensation domain KAB04_01122 PF13193 AMP-binding enzyme C-terminal domain KAB04_01122 PF00501 AMP-binding enzyme KAB04_01122 PF00975 Thioesterase domain KAB04_01125 PF01032 FecCD transport family KAB04_01126 PF01032 FecCD transport family KAB04_01127 PF00005 ABC transporter KAB04_01128 PF01497 Periplasmic binding protein KAB04_01129 PF00593 TonB dependent receptor KAB04_01129 PF07715 TonB-dependent Receptor Plug Domain KAB04_01130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB04_01131 PF00501 AMP-binding enzyme KAB04_01131 PF00550 Phosphopantetheine attachment site KAB04_01131 PF00668 Condensation domain KAB04_01132 PF13193 AMP-binding enzyme C-terminal domain KAB04_01132 PF00501 AMP-binding enzyme KAB04_01133 PF00550 Phosphopantetheine attachment site KAB04_01133 PF00857 Isochorismatase family KAB04_01134 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB04_01136 PF00664 ABC transporter transmembrane region KAB04_01136 PF00005 ABC transporter KAB04_01137 PF00005 ABC transporter KAB04_01137 PF00664 ABC transporter transmembrane region KAB04_01138 PF00975 Thioesterase domain KAB04_01140 PF00425 chorismate binding enzyme KAB04_01142 PF01208 Uroporphyrinogen decarboxylase (URO-D) KAB04_01143 PF05675 Protein of unknown function (DUF817) KAB04_01146 PF00144 Beta-lactamase KAB04_01150 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_01150 PF01799 [2Fe-2S] binding domain KAB04_01151 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAB04_01151 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB04_01154 PF00218 Indole-3-glycerol phosphate synthase KAB04_01155 PF00591 Glycosyl transferase family, a/b domain KAB04_01155 PF02885 Glycosyl transferase family, helical bundle domain KAB04_01156 PF00593 TonB dependent receptor KAB04_01156 PF07715 TonB-dependent Receptor Plug Domain KAB04_01157 PF01433 Peptidase family M1 domain KAB04_01157 PF11838 ERAP1-like C-terminal domain KAB04_01158 PF00117 Glutamine amidotransferase class-I KAB04_01172 PF01381 Helix-turn-helix KAB04_01179 PF01695 IstB-like ATP binding protein KAB04_01213 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system KAB04_01219 PF01551 Peptidase family M23 KAB04_01219 PF01476 LysM domain KAB04_01219 PF08525 Opacity-associated protein A N-terminal motif KAB04_01229 PF13356 Arm DNA-binding domain KAB04_01229 PF00589 Phage integrase family KAB04_01231 PF00854 POT family KAB04_01233 PF04345 Chorismate lyase KAB04_01234 PF01040 UbiA prenyltransferase family KAB04_01241 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAB04_01241 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAB04_01242 PF01784 NIF3 (NGG1p interacting factor 3) KAB04_01243 PF13180 PDZ domain KAB04_01244 PF01743 Poly A polymerase head domain KAB04_01244 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB04_01245 PF00390 Malic enzyme, N-terminal domain KAB04_01245 PF03949 Malic enzyme, NAD binding domain KAB04_01245 PF01515 Phosphate acetyl/butaryl transferase KAB04_01246 PF00990 Diguanylate cyclase, GGDEF domain KAB04_01246 PF00563 EAL domain KAB04_01246 PF03707 Bacterial signalling protein N terminal repeat KAB04_01247 PF04452 RNA methyltransferase KAB04_01248 PF02219 Methylenetetrahydrofolate reductase KAB04_01249 PF05221 S-adenosyl-L-homocysteine hydrolase KAB04_01249 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB04_01252 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_01252 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_01252 PF09317 Domain of unknown function (DUF1974) KAB04_01253 PF04055 Radical SAM superfamily KAB04_01254 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01254 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB04_01257 PF07690 Major Facilitator Superfamily KAB04_01259 PF00557 Metallopeptidase family M24 KAB04_01260 PF00318 Ribosomal protein S2 KAB04_01261 PF00889 Elongation factor TS KAB04_01264 PF13737 Transposase DDE domain KAB04_01265 PF12833 Helix-turn-helix domain KAB04_01269 PF05036 Sporulation related domain KAB04_01269 PF03330 Lytic transglycolase KAB04_01270 PF13406 Transglycosylase SLT domain KAB04_01271 PF01098 Cell cycle protein KAB04_01273 PF14489 QueF-like protein KAB04_01273 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KAB04_01274 PF01061 ABC-2 type transporter KAB04_01275 PF00005 ABC transporter KAB04_01281 PF00464 Serine hydroxymethyltransferase KAB04_01282 PF02321 Outer membrane efflux protein KAB04_01283 PF00873 AcrB/AcrD/AcrF family KAB04_01284 PF13533 Biotin-lipoyl like KAB04_01286 PF03466 LysR substrate binding domain KAB04_01286 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01287 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB04_01288 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01289 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01290 PF00005 ABC transporter KAB04_01291 PF00893 Small Multidrug Resistance protein KAB04_01292 PF00037 4Fe-4S binding domain KAB04_01294 PF00155 Aminotransferase class I and II KAB04_01294 PF00392 Bacterial regulatory proteins, gntR family KAB04_01295 PF02567 Phenazine biosynthesis-like protein KAB04_01296 PF00175 Oxidoreductase NAD-binding domain KAB04_01296 PF00970 Oxidoreductase FAD-binding domain KAB04_01297 PF18389 TrmO C-terminal domain KAB04_01297 PF01980 tRNA-methyltransferase O KAB04_01299 PF00437 Type II/IV secretion system protein KAB04_01301 PF00072 Response regulator receiver domain KAB04_01301 PF00486 Transcriptional regulatory protein, C terminal KAB04_01302 PF00512 His Kinase A (phospho-acceptor) domain KAB04_01302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_01302 PF08521 Two-component sensor kinase N-terminal KAB04_01304 PF00293 NUDIX domain KAB04_01306 PF00912 Transglycosylase KAB04_01306 PF00905 Penicillin binding protein transpeptidase domain KAB04_01306 PF14814 Bifunctional transglycosylase second domain KAB04_01307 PF01513 ATP-NAD kinase KAB04_01308 PF07023 Protein of unknown function (DUF1315) KAB04_01309 PF00591 Glycosyl transferase family, a/b domain KAB04_01309 PF02885 Glycosyl transferase family, helical bundle domain KAB04_01310 PF00375 Sodium:dicarboxylate symporter family KAB04_01311 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_01311 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_01311 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_01312 PF00756 Putative esterase KAB04_01313 PF01842 ACT domain KAB04_01313 PF00800 Prephenate dehydratase KAB04_01313 PF01817 Chorismate mutase type II KAB04_01314 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB04_01316 PF07687 Peptidase dimerisation domain KAB04_01316 PF01546 Peptidase family M20/M25/M40 KAB04_01317 PF12706 Beta-lactamase superfamily domain KAB04_01319 PF03883 Peroxide stress protein YaaA KAB04_01321 PF05690 Thiazole biosynthesis protein ThiG KAB04_01323 PF04241 Protein of unknown function (DUF423) KAB04_01324 PF00140 Sigma-70 factor, region 1.2 KAB04_01324 PF04542 Sigma-70 region 2 KAB04_01324 PF04545 Sigma-70, region 4 KAB04_01326 PF00313 'Cold-shock' DNA-binding domain KAB04_01327 PF00270 DEAD/DEAH box helicase KAB04_01327 PF00271 Helicase conserved C-terminal domain KAB04_01329 PF00881 Nitroreductase family KAB04_01330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAB04_01330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAB04_01334 PF01180 Dihydroorotate dehydrogenase KAB04_01335 PF02674 Colicin V production protein KAB04_01336 PF00156 Phosphoribosyl transferase domain KAB04_01339 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB04_01339 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB04_01340 PF01435 Peptidase family M48 KAB04_01341 PF09424 Yqey-like protein KAB04_01342 PF01165 Ribosomal protein S21 KAB04_01343 PF00814 Glycoprotease family KAB04_01347 PF00069 Protein kinase domain KAB04_01352 PF03466 LysR substrate binding domain KAB04_01352 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01353 PF00202 Aminotransferase class-III KAB04_01354 PF00171 Aldehyde dehydrogenase family KAB04_01355 PF00324 Amino acid permease KAB04_01357 PF13737 Transposase DDE domain KAB04_01362 PF04076 Bacterial OB fold (BOF) protein KAB04_01367 PF00561 alpha/beta hydrolase fold KAB04_01368 PF03616 Sodium/glutamate symporter KAB04_01370 PF07729 FCD domain KAB04_01370 PF00392 Bacterial regulatory proteins, gntR family KAB04_01373 PF13737 Transposase DDE domain KAB04_01374 PF13737 Transposase DDE domain KAB04_01382 PF00083 Sugar (and other) transporter KAB04_01382 PF08946 Osmosensory transporter coiled coil KAB04_01385 PF00155 Aminotransferase class I and II KAB04_01386 PF06826 Predicted Permease Membrane Region KAB04_01386 PF02080 TrkA-C domain KAB04_01388 PF04403 Paraquat-inducible protein A KAB04_01389 PF02470 MlaD protein KAB04_01391 PF01177 Asp/Glu/Hydantoin racemase KAB04_01392 PF00892 EamA-like transporter family KAB04_01393 PF13737 Transposase DDE domain KAB04_01394 PF07995 Glucose / Sorbosone dehydrogenase KAB04_01396 PF13610 DDE domain KAB04_01397 PF00589 Phage integrase family KAB04_01397 PF13495 Phage integrase, N-terminal SAM-like domain KAB04_01399 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_01400 PF01909 Nucleotidyltransferase domain KAB04_01400 PF13427 Domain of unknown function (DUF4111) KAB04_01401 PF00893 Small Multidrug Resistance protein KAB04_01402 PF00809 Pterin binding enzyme KAB04_01404 PF13737 Transposase DDE domain KAB04_01405 PF07091 Ribosomal RNA methyltransferase (FmrO) KAB04_01409 PF01636 Phosphotransferase enzyme family KAB04_01410 PF13610 DDE domain KAB04_01411 PF13817 IS66 C-terminal element KAB04_01411 PF03050 Transposase IS66 family KAB04_01411 PF13007 Transposase C of IS166 homeodomain KAB04_01411 PF13005 zinc-finger binding domain of transposase IS66 KAB04_01413 PF13610 DDE domain KAB04_01416 PF00375 Sodium:dicarboxylate symporter family KAB04_01417 PF13610 DDE domain KAB04_01418 PF00375 Sodium:dicarboxylate symporter family KAB04_01420 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAB04_01420 PF00753 Metallo-beta-lactamase superfamily KAB04_01421 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01422 PF00005 ABC transporter KAB04_01422 PF09383 NIL domain KAB04_01423 PF03180 NLPA lipoprotein KAB04_01424 PF02844 Phosphoribosylglycinamide synthetase, N domain KAB04_01424 PF02843 Phosphoribosylglycinamide synthetase, C domain KAB04_01424 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAB04_01425 PF02142 MGS-like domain KAB04_01425 PF01808 AICARFT/IMPCHase bienzyme KAB04_01426 PF02954 Bacterial regulatory protein, Fis family KAB04_01430 PF01134 Glucose inhibited division protein A KAB04_01430 PF13932 GidA associated domain KAB04_01432 PF14403 Circularly permuted ATP-grasp type 2 KAB04_01434 PF01841 Transglutaminase-like superfamily KAB04_01434 PF08379 Bacterial transglutaminase-like N-terminal region KAB04_01436 PF01168 Alanine racemase, N-terminal domain KAB04_01436 PF00842 Alanine racemase, C-terminal domain KAB04_01437 PF00772 DnaB-like helicase N terminal domain KAB04_01437 PF03796 DnaB-like helicase C terminal domain KAB04_01438 PF03948 Ribosomal protein L9, C-terminal domain KAB04_01438 PF01281 Ribosomal protein L9, N-terminal domain KAB04_01439 PF01084 Ribosomal protein S18 KAB04_01440 PF01250 Ribosomal protein S6 KAB04_01441 PF01040 UbiA prenyltransferase family KAB04_01442 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KAB04_01443 PF00510 Cytochrome c oxidase subunit III KAB04_01444 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAB04_01445 PF06481 COX Aromatic Rich Motif KAB04_01445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAB04_01447 PF00391 PEP-utilising enzyme, mobile domain KAB04_01447 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAB04_01447 PF02896 PEP-utilising enzyme, TIM barrel domain KAB04_01448 PF03618 Kinase/pyrophosphorylase KAB04_01450 PF14883 Hypothetical glycosyl hydrolase family 13 KAB04_01450 PF01522 Polysaccharide deacetylase KAB04_01451 PF00535 Glycosyl transferase family 2 KAB04_01454 PF00296 Luciferase-like monooxygenase KAB04_01457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01457 PF03466 LysR substrate binding domain KAB04_01459 PF03462 PCRF domain KAB04_01459 PF00472 RF-1 domain KAB04_01460 PF13847 Methyltransferase domain KAB04_01460 PF17827 PrmC N-terminal domain KAB04_01461 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01462 PF09084 NMT1/THI5 like KAB04_01463 PF12833 Helix-turn-helix domain KAB04_01464 PF00106 short chain dehydrogenase KAB04_01465 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_01465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_01465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_01466 PF13193 AMP-binding enzyme C-terminal domain KAB04_01466 PF00501 AMP-binding enzyme KAB04_01467 PF01613 Flavin reductase like domain KAB04_01468 PF00899 ThiF family KAB04_01469 PF03109 ABC1 family KAB04_01472 PF03814 Potassium-transporting ATPase A subunit KAB04_01474 PF02669 K+-transporting ATPase, c chain KAB04_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_01475 PF00512 His Kinase A (phospho-acceptor) domain KAB04_01475 PF02702 Osmosensitive K+ channel His kinase sensor domain KAB04_01475 PF13493 Domain of unknown function (DUF4118) KAB04_01476 PF00072 Response regulator receiver domain KAB04_01476 PF00486 Transcriptional regulatory protein, C terminal KAB04_01477 PF00120 Glutamine synthetase, catalytic domain KAB04_01479 PF03232 Ubiquinone biosynthesis protein COQ7 KAB04_01480 PF07690 Major Facilitator Superfamily KAB04_01481 PF17243 POTRA domain TamA domain 1 KAB04_01481 PF07244 Surface antigen variable number repeat KAB04_01481 PF01103 Surface antigen KAB04_01484 PF06434 Aconitate hydratase 2 N-terminus KAB04_01484 PF00330 Aconitase family (aconitate hydratase) KAB04_01484 PF11791 Aconitate B N-terminal domain KAB04_01486 PF00520 Ion transport protein KAB04_01486 PF00027 Cyclic nucleotide-binding domain KAB04_01487 PF07690 Major Facilitator Superfamily KAB04_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01490 PF03466 LysR substrate binding domain KAB04_01491 PF04284 Protein of unknown function (DUF441) KAB04_01493 PF01479 S4 domain KAB04_01493 PF00849 RNA pseudouridylate synthase KAB04_01496 PF01479 S4 domain KAB04_01496 PF00849 RNA pseudouridylate synthase KAB04_01497 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAB04_01498 PF08676 MutL C terminal dimerisation domain KAB04_01498 PF01119 DNA mismatch repair protein, C-terminal domain KAB04_01500 PF17209 Hfq protein KAB04_01502 PF00881 Nitroreductase family KAB04_01504 PF00149 Calcineurin-like phosphoesterase KAB04_01505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB04_01506 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB04_01506 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAB04_01507 PF00117 Glutamine amidotransferase class-I KAB04_01507 PF00958 GMP synthase C terminal domain KAB04_01507 PF02540 NAD synthase KAB04_01508 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KAB04_01509 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KAB04_01510 PF13520 Amino acid permease KAB04_01511 PF00171 Aldehyde dehydrogenase family KAB04_01514 PF00465 Iron-containing alcohol dehydrogenase KAB04_01515 PF05970 PIF1-like helicase KAB04_01515 PF14493 Helix-turn-helix domain KAB04_01517 PF06445 GyrI-like small molecule binding domain KAB04_01518 PF02110 Hydroxyethylthiazole kinase family KAB04_01521 PF01433 Peptidase family M1 domain KAB04_01521 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KAB04_01521 PF11940 Domain of unknown function (DUF3458) Ig-like fold KAB04_01523 PF00106 short chain dehydrogenase KAB04_01525 PF01817 Chorismate mutase type II KAB04_01526 PF01037 Lrp/AsnC ligand binding domain KAB04_01528 PF13737 Transposase DDE domain KAB04_01529 PF00440 Bacterial regulatory proteins, tetR family KAB04_01530 PF00593 TonB dependent receptor KAB04_01530 PF07715 TonB-dependent Receptor Plug Domain KAB04_01531 PF00924 Mechanosensitive ion channel KAB04_01539 PF00593 TonB dependent receptor KAB04_01539 PF07715 TonB-dependent Receptor Plug Domain KAB04_01543 PF00005 ABC transporter KAB04_01543 PF12848 ABC transporter KAB04_01544 PF00582 Universal stress protein family KAB04_01549 PF00690 Cation transporter/ATPase, N-terminus KAB04_01549 PF00689 Cation transporting ATPase, C-terminus KAB04_01550 PF02308 MgtC family KAB04_01551 PF03594 Benzoate membrane transport protein KAB04_01552 PF01037 Lrp/AsnC ligand binding domain KAB04_01553 PF01810 LysE type translocator KAB04_01555 PF03466 LysR substrate binding domain KAB04_01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01557 PF00108 Thiolase, N-terminal domain KAB04_01557 PF02803 Thiolase, C-terminal domain KAB04_01562 PF07690 Major Facilitator Superfamily KAB04_01563 PF12169 DNA polymerase III subunits gamma and tau domain III KAB04_01563 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KAB04_01563 PF12170 DNA polymerase III tau subunit V interacting with alpha KAB04_01565 PF05506 Domain of unknown function (DUF756) KAB04_01565 PF04185 Phosphoesterase family KAB04_01566 PF03061 Thioesterase superfamily KAB04_01567 PF00465 Iron-containing alcohol dehydrogenase KAB04_01569 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB04_01570 PF01565 FAD binding domain KAB04_01570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAB04_01573 PF01645 Conserved region in glutamate synthase KAB04_01638 PF13737 Transposase DDE domain KAB04_01640 PF13333 Integrase core domain KAB04_01640 PF00665 Integrase core domain KAB04_01640 PF13276 HTH-like domain KAB04_01642 PF12832 MFS_1 like family KAB04_01644 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB04_01644 PF00289 Biotin carboxylase, N-terminal domain KAB04_01644 PF02785 Biotin carboxylase C-terminal domain KAB04_01645 PF00364 Biotin-requiring enzyme KAB04_01646 PF01220 Dehydroquinase class II KAB04_01647 PF11799 impB/mucB/samB family C-terminal domain KAB04_01647 PF00817 impB/mucB/samB family KAB04_01647 PF13438 Domain of unknown function (DUF4113) KAB04_01648 PF00005 ABC transporter KAB04_01649 PF00072 Response regulator receiver domain KAB04_01649 PF00486 Transcriptional regulatory protein, C terminal KAB04_01651 PF04324 BFD-like [2Fe-2S] binding domain KAB04_01651 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB04_01651 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB04_01651 PF13806 Rieske-like [2Fe-2S] domain KAB04_01651 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB04_01651 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01652 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB04_01652 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB04_01652 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01652 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB04_01652 PF04324 BFD-like [2Fe-2S] binding domain KAB04_01653 PF01568 Molydopterin dinucleotide binding domain KAB04_01653 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB04_01653 PF04324 BFD-like [2Fe-2S] binding domain KAB04_01653 PF00384 Molybdopterin oxidoreductase KAB04_01654 PF12804 MobA-like NTP transferase domain KAB04_01655 PF00384 Molybdopterin oxidoreductase KAB04_01655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB04_01655 PF01568 Molydopterin dinucleotide binding domain KAB04_01656 PF06463 Molybdenum Cofactor Synthesis C KAB04_01656 PF04055 Radical SAM superfamily KAB04_01658 PF02391 MoaE protein KAB04_01659 PF00994 Probable molybdopterin binding domain KAB04_01659 PF01967 MoaC family KAB04_01660 PF03453 MoeA N-terminal region (domain I and II) KAB04_01660 PF03454 MoeA C-terminal region (domain IV) KAB04_01660 PF00994 Probable molybdopterin binding domain KAB04_01661 PF01638 HxlR-like helix-turn-helix KAB04_01662 PF00155 Aminotransferase class I and II KAB04_01662 PF00392 Bacterial regulatory proteins, gntR family KAB04_01663 PF00892 EamA-like transporter family KAB04_01667 PF02635 DsrE/DsrF-like family KAB04_01668 PF16363 GDP-mannose 4,6 dehydratase KAB04_01669 PF00206 Lyase KAB04_01669 PF10415 Fumarase C C-terminus KAB04_01673 PF01266 FAD dependent oxidoreductase KAB04_01675 PF02542 YgbB family KAB04_01677 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB04_01677 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB04_01678 PF00440 Bacterial regulatory proteins, tetR family KAB04_01679 PF00158 Sigma-54 interaction domain KAB04_01679 PF00072 Response regulator receiver domain KAB04_01679 PF02954 Bacterial regulatory protein, Fis family KAB04_01680 PF00989 PAS fold KAB04_01680 PF00512 His Kinase A (phospho-acceptor) domain KAB04_01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_01681 PF04055 Radical SAM superfamily KAB04_01681 PF18693 TRAM domain KAB04_01681 PF00919 Uncharacterized protein family UPF0004 KAB04_01682 PF00696 Amino acid kinase family KAB04_01683 PF01765 Ribosome recycling factor KAB04_01684 PF01255 Putative undecaprenyl diphosphate synthase KAB04_01686 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAB04_01686 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAB04_01686 PF13288 DXP reductoisomerase C-terminal domain KAB04_01687 PF13180 PDZ domain KAB04_01687 PF17820 PDZ domain KAB04_01687 PF02163 Peptidase family M50 KAB04_01688 PF07244 Surface antigen variable number repeat KAB04_01688 PF01103 Surface antigen KAB04_01690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAB04_01690 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_01691 PF07977 FabA-like domain KAB04_01692 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_01692 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAB04_01694 PF02631 RecX family KAB04_01695 PF00154 recA bacterial DNA recombination protein KAB04_01696 PF01479 S4 domain KAB04_01697 PF13419 Haloacid dehalogenase-like hydrolase KAB04_01702 PF01037 Lrp/AsnC ligand binding domain KAB04_01703 PF00266 Aminotransferase class-V KAB04_01704 PF00324 Amino acid permease KAB04_01706 PF13737 Transposase DDE domain KAB04_01707 PF05922 Peptidase inhibitor I9 KAB04_01707 PF00082 Subtilase family KAB04_01708 PF01740 STAS domain KAB04_01708 PF00916 Sulfate permease family KAB04_01709 PF02586 SOS response associated peptidase (SRAP) KAB04_01710 PF07995 Glucose / Sorbosone dehydrogenase KAB04_01712 PF00990 Diguanylate cyclase, GGDEF domain KAB04_01712 PF03707 Bacterial signalling protein N terminal repeat KAB04_01712 PF00563 EAL domain KAB04_01717 PF02378 Phosphotransferase system, EIIC KAB04_01717 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAB04_01718 PF00294 pfkB family carbohydrate kinase KAB04_01719 PF02896 PEP-utilising enzyme, TIM barrel domain KAB04_01719 PF05524 PEP-utilising enzyme, N-terminal KAB04_01719 PF00391 PEP-utilising enzyme, mobile domain KAB04_01719 PF00381 PTS HPr component phosphorylation site KAB04_01719 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAB04_01724 PF05525 Branched-chain amino acid transport protein KAB04_01725 PF00557 Metallopeptidase family M24 KAB04_01726 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01726 PF03466 LysR substrate binding domain KAB04_01728 PF00462 Glutaredoxin KAB04_01729 PF00202 Aminotransferase class-III KAB04_01730 PF00571 CBS domain KAB04_01730 PF00478 IMP dehydrogenase / GMP reductase domain KAB04_01735 PF02881 SRP54-type protein, helical bundle domain KAB04_01735 PF00448 SRP54-type protein, GTPase domain KAB04_01737 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KAB04_01740 PF08173 Membrane bound YbgT-like protein KAB04_01741 PF02322 Cytochrome bd terminal oxidase subunit II KAB04_01742 PF01654 Cytochrome bd terminal oxidase subunit I KAB04_01744 PF13737 Transposase DDE domain KAB04_01745 PF07290 Protein of unknown function (DUF1449) KAB04_01747 PF00294 pfkB family carbohydrate kinase KAB04_01748 PF07715 TonB-dependent Receptor Plug Domain KAB04_01748 PF00593 TonB dependent receptor KAB04_01749 PF00675 Insulinase (Peptidase family M16) KAB04_01749 PF05193 Peptidase M16 inactive domain KAB04_01749 PF08367 Peptidase M16C associated KAB04_01750 PF02253 Phospholipase A1 KAB04_01751 PF02386 Cation transport protein KAB04_01752 PF02254 TrkA-N domain KAB04_01752 PF02080 TrkA-C domain KAB04_01753 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_01753 PF00585 C-terminal regulatory domain of Threonine dehydratase KAB04_01754 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAB04_01757 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB04_01757 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB04_01759 PF02617 ATP-dependent Clp protease adaptor protein ClpS KAB04_01760 PF10431 C-terminal, D2-small domain, of ClpB protein KAB04_01760 PF02861 Clp amino terminal domain, pathogenicity island component KAB04_01760 PF17871 AAA lid domain KAB04_01760 PF00004 ATPase family associated with various cellular activities (AAA) KAB04_01760 PF07724 AAA domain (Cdc48 subfamily) KAB04_01761 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KAB04_01762 PF00793 DAHP synthetase I family KAB04_01765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB04_01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01771 PF06418 CTP synthase N-terminus KAB04_01771 PF00117 Glutamine amidotransferase class-I KAB04_01772 PF00793 DAHP synthetase I family KAB04_01773 PF00113 Enolase, C-terminal TIM barrel domain KAB04_01773 PF03952 Enolase, N-terminal domain KAB04_01774 PF04239 Protein of unknown function (DUF421) KAB04_01775 PF04977 Septum formation initiator KAB04_01776 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAB04_01777 PF01144 Coenzyme A transferase KAB04_01778 PF01144 Coenzyme A transferase KAB04_01779 PF02803 Thiolase, C-terminal domain KAB04_01779 PF00108 Thiolase, N-terminal domain KAB04_01780 PF10397 Adenylosuccinate lyase C-terminus KAB04_01780 PF00206 Lyase KAB04_01781 PF00561 alpha/beta hydrolase fold KAB04_01782 PF07690 Major Facilitator Superfamily KAB04_01783 PF02627 Carboxymuconolactone decarboxylase family KAB04_01784 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KAB04_01784 PF00775 Dioxygenase KAB04_01785 PF00775 Dioxygenase KAB04_01786 PF01487 Type I 3-dehydroquinase KAB04_01787 PF05048 Periplasmic copper-binding protein (NosD) KAB04_01788 PF04966 Carbohydrate-selective porin, OprB family KAB04_01789 PF13360 PQQ-like domain KAB04_01789 PF01011 PQQ enzyme repeat KAB04_01791 PF04143 Sulphur transport KAB04_01793 PF00753 Metallo-beta-lactamase superfamily KAB04_01794 PF09339 IclR helix-turn-helix domain KAB04_01794 PF01614 Bacterial transcriptional regulator KAB04_01795 PF03466 LysR substrate binding domain KAB04_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01796 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_01796 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_01796 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_01799 PF00106 short chain dehydrogenase KAB04_01801 PF07690 Major Facilitator Superfamily KAB04_01803 PF01425 Amidase KAB04_01804 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB04_01807 PF00355 Rieske [2Fe-2S] domain KAB04_01807 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB04_01810 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_01810 PF00175 Oxidoreductase NAD-binding domain KAB04_01811 PF01613 Flavin reductase like domain KAB04_01812 PF12833 Helix-turn-helix domain KAB04_01812 PF02311 AraC-like ligand binding domain KAB04_01813 PF02728 Copper amine oxidase, N3 domain KAB04_01813 PF02727 Copper amine oxidase, N2 domain KAB04_01813 PF01179 Copper amine oxidase, enzyme domain KAB04_01813 PF07833 Copper amine oxidase N-terminal domain KAB04_01815 PF00171 Aldehyde dehydrogenase family KAB04_01816 PF01804 Penicillin amidase KAB04_01817 PF12146 Serine aminopeptidase, S33 KAB04_01818 PF00108 Thiolase, N-terminal domain KAB04_01818 PF02803 Thiolase, C-terminal domain KAB04_01819 PF01144 Coenzyme A transferase KAB04_01820 PF01144 Coenzyme A transferase KAB04_01821 PF04444 Catechol dioxygenase N terminus KAB04_01821 PF00775 Dioxygenase KAB04_01822 PF02426 Muconolactone delta-isomerase KAB04_01823 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB04_01823 PF13378 Enolase C-terminal domain-like KAB04_01824 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01824 PF03466 LysR substrate binding domain KAB04_01826 PF07729 FCD domain KAB04_01826 PF00392 Bacterial regulatory proteins, gntR family KAB04_01827 PF00920 Dehydratase family KAB04_01828 PF07690 Major Facilitator Superfamily KAB04_01830 PF00171 Aldehyde dehydrogenase family KAB04_01834 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_01834 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_01834 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_01836 PF06506 Propionate catabolism activator KAB04_01836 PF02954 Bacterial regulatory protein, Fis family KAB04_01836 PF00158 Sigma-54 interaction domain KAB04_01837 PF00501 AMP-binding enzyme KAB04_01837 PF13193 AMP-binding enzyme C-terminal domain KAB04_01838 PF04341 Protein of unknown function, DUF485 KAB04_01839 PF00474 Sodium:solute symporter family KAB04_01840 PF00107 Zinc-binding dehydrogenase KAB04_01840 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_01841 PF00171 Aldehyde dehydrogenase family KAB04_01843 PF00561 alpha/beta hydrolase fold KAB04_01844 PF06628 Catalase-related immune-responsive KAB04_01844 PF00199 Catalase KAB04_01847 PF07859 alpha/beta hydrolase fold KAB04_01848 PF01047 MarR family KAB04_01849 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01849 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB04_01850 PF00106 short chain dehydrogenase KAB04_01851 PF01872 RibD C-terminal domain KAB04_01852 PF09278 MerR, DNA binding KAB04_01852 PF00376 MerR family regulatory protein KAB04_01854 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_01856 PF12706 Beta-lactamase superfamily domain KAB04_01857 PF00440 Bacterial regulatory proteins, tetR family KAB04_01857 PF08359 YsiA-like protein, C-terminal region KAB04_01859 PF00857 Isochorismatase family KAB04_01860 PF03466 LysR substrate binding domain KAB04_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01861 PF07995 Glucose / Sorbosone dehydrogenase KAB04_01862 PF02254 TrkA-N domain KAB04_01862 PF00999 Sodium/hydrogen exchanger family KAB04_01864 PF01546 Peptidase family M20/M25/M40 KAB04_01864 PF07687 Peptidase dimerisation domain KAB04_01866 PF08479 POTRA domain, ShlB-type KAB04_01866 PF17287 POTRA domain KAB04_01866 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KAB04_01867 PF04829 Pre-toxin domain with VENN motif KAB04_01867 PF05860 haemagglutination activity domain KAB04_01867 PF13018 Extended Signal Peptide of Type V secretion system KAB04_01867 PF13332 Hemagglutinin repeat KAB04_01870 PF07690 Major Facilitator Superfamily KAB04_01871 PF04909 Amidohydrolase KAB04_01874 PF08450 SMP-30/Gluconolactonase/LRE-like region KAB04_01876 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01876 PF03466 LysR substrate binding domain KAB04_01880 PF07690 Major Facilitator Superfamily KAB04_01881 PF01842 ACT domain KAB04_01881 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB04_01881 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB04_01882 PF03737 Aldolase/RraA KAB04_01886 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_01886 PF00529 HlyD membrane-fusion protein of T1SS KAB04_01889 PF00171 Aldehyde dehydrogenase family KAB04_01890 PF00920 Dehydratase family KAB04_01892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01892 PF03466 LysR substrate binding domain KAB04_01893 PF01370 NAD dependent epimerase/dehydratase family KAB04_01894 PF07690 Major Facilitator Superfamily KAB04_01895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB04_01895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB04_01896 PF12833 Helix-turn-helix domain KAB04_01896 PF06719 AraC-type transcriptional regulator N-terminus KAB04_01899 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_01899 PF00107 Zinc-binding dehydrogenase KAB04_01902 PF00005 ABC transporter KAB04_01906 PF14572 Phosphoribosyl synthetase-associated domain KAB04_01906 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB04_01907 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB04_01922 PF00196 Bacterial regulatory proteins, luxR family KAB04_01923 PF01425 Amidase KAB04_01924 PF13533 Biotin-lipoyl like KAB04_01925 PF07690 Major Facilitator Superfamily KAB04_01930 PF01975 Survival protein SurE KAB04_01932 PF02824 TGS domain KAB04_01932 PF04607 Region found in RelA / SpoT proteins KAB04_01932 PF13291 ACT domain KAB04_01935 PF13737 Transposase DDE domain KAB04_01937 PF13737 Transposase DDE domain KAB04_01946 PF12146 Serine aminopeptidase, S33 KAB04_01947 PF12833 Helix-turn-helix domain KAB04_01947 PF02311 AraC-like ligand binding domain KAB04_01949 PF00672 HAMP domain KAB04_01949 PF16527 Two-component sensor protein CpxA, periplasmic domain KAB04_01949 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_01949 PF00512 His Kinase A (phospho-acceptor) domain KAB04_01950 PF00486 Transcriptional regulatory protein, C terminal KAB04_01950 PF00072 Response regulator receiver domain KAB04_01951 PF00529 HlyD membrane-fusion protein of T1SS KAB04_01951 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_01952 PF00873 AcrB/AcrD/AcrF family KAB04_01953 PF02321 Outer membrane efflux protein KAB04_01954 PF12146 Serine aminopeptidase, S33 KAB04_01955 PF00743 Flavin-binding monooxygenase-like KAB04_01956 PF01593 Flavin containing amine oxidoreductase KAB04_01959 PF01266 FAD dependent oxidoreductase KAB04_01963 PF16970 Type-1 fimbrial protein, A KAB04_01966 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB04_01966 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB04_01967 PF00577 Outer membrane usher protein KAB04_01967 PF13954 PapC N-terminal domain KAB04_01967 PF13953 PapC C-terminal domain KAB04_01968 PF00419 Fimbrial protein KAB04_01970 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_01970 PF00107 Zinc-binding dehydrogenase KAB04_01972 PF00199 Catalase KAB04_01975 PF13091 PLD-like domain KAB04_01979 PF01244 Membrane dipeptidase (Peptidase family M19) KAB04_01980 PF04055 Radical SAM superfamily KAB04_01980 PF13186 Iron-sulfur cluster-binding domain KAB04_01981 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KAB04_01982 PF03070 TENA/THI-4/PQQC family KAB04_01983 PF12706 Beta-lactamase superfamily domain KAB04_01984 PF13089 Polyphosphate kinase N-terminal domain KAB04_01984 PF02503 Polyphosphate kinase middle domain KAB04_01984 PF17941 Polyphosphate kinase C-terminal domain 1 KAB04_01984 PF13090 Polyphosphate kinase C-terminal domain 2 KAB04_01985 PF00149 Calcineurin-like phosphoesterase KAB04_01987 PF00857 Isochorismatase family KAB04_01987 PF00550 Phosphopantetheine attachment site KAB04_01988 PF00106 short chain dehydrogenase KAB04_01989 PF03459 TOBE domain KAB04_01989 PF00005 ABC transporter KAB04_01990 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_01992 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_01992 PF03459 TOBE domain KAB04_01993 PF00355 Rieske [2Fe-2S] domain KAB04_01993 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB04_01994 PF00866 Ring hydroxylating beta subunit KAB04_01995 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_01995 PF00970 Oxidoreductase FAD-binding domain KAB04_01995 PF00175 Oxidoreductase NAD-binding domain KAB04_01996 PF14525 AraC-binding-like domain KAB04_01996 PF12833 Helix-turn-helix domain KAB04_01998 PF01613 Flavin reductase like domain KAB04_02001 PF01738 Dienelactone hydrolase family KAB04_02002 PF07690 Major Facilitator Superfamily KAB04_02003 PF13737 Transposase DDE domain KAB04_02009 PF03466 LysR substrate binding domain KAB04_02009 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02010 PF01144 Coenzyme A transferase KAB04_02011 PF01144 Coenzyme A transferase KAB04_02012 PF02667 Short chain fatty acid transporter KAB04_02013 PF00108 Thiolase, N-terminal domain KAB04_02013 PF02803 Thiolase, C-terminal domain KAB04_02014 PF03466 LysR substrate binding domain KAB04_02014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02015 PF03466 LysR substrate binding domain KAB04_02018 PF10415 Fumarase C C-terminus KAB04_02018 PF00206 Lyase KAB04_02019 PF00593 TonB dependent receptor KAB04_02019 PF07715 TonB-dependent Receptor Plug Domain KAB04_02020 PF00083 Sugar (and other) transporter KAB04_02023 PF00005 ABC transporter KAB04_02024 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02025 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB04_02030 PF02525 Flavodoxin-like fold KAB04_02031 PF01638 HxlR-like helix-turn-helix KAB04_02032 PF12833 Helix-turn-helix domain KAB04_02032 PF06445 GyrI-like small molecule binding domain KAB04_02035 PF01925 Sulfite exporter TauE/SafE KAB04_02036 PF00753 Metallo-beta-lactamase superfamily KAB04_02036 PF04273 Putative phosphatase (DUF442) KAB04_02037 PF04273 Putative phosphatase (DUF442) KAB04_02037 PF00753 Metallo-beta-lactamase superfamily KAB04_02038 PF02954 Bacterial regulatory protein, Fis family KAB04_02038 PF00072 Response regulator receiver domain KAB04_02038 PF00158 Sigma-54 interaction domain KAB04_02039 PF01062 Bestrophin, RFP-TM, chloride channel KAB04_02040 PF00107 Zinc-binding dehydrogenase KAB04_02040 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_02041 PF00106 short chain dehydrogenase KAB04_02042 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB04_02042 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02043 PF02817 e3 binding domain KAB04_02043 PF00364 Biotin-requiring enzyme KAB04_02043 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB04_02044 PF02779 Transketolase, pyrimidine binding domain KAB04_02044 PF02780 Transketolase, C-terminal domain KAB04_02045 PF00676 Dehydrogenase E1 component KAB04_02046 PF04055 Radical SAM superfamily KAB04_02049 PF00990 Diguanylate cyclase, GGDEF domain KAB04_02049 PF08448 PAS fold KAB04_02050 PF01264 Chorismate synthase KAB04_02051 PF05175 Methyltransferase small domain KAB04_02052 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_02054 PF01434 Peptidase family M41 KAB04_02054 PF00004 ATPase family associated with various cellular activities (AAA) KAB04_02054 PF17862 AAA+ lid domain KAB04_02056 PF05166 YcgL domain KAB04_02060 PF00570 HRDC domain KAB04_02060 PF01612 3'-5' exonuclease KAB04_02061 PF13662 Toprim domain KAB04_02061 PF02132 RecR protein KAB04_02062 PF02575 YbaB/EbfC DNA-binding family KAB04_02064 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB04_02065 PF00561 alpha/beta hydrolase fold KAB04_02066 PF08241 Methyltransferase domain KAB04_02067 PF13737 Transposase DDE domain KAB04_02074 PF01230 HIT domain KAB04_02081 PF00005 ABC transporter KAB04_02082 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_02084 PF02684 Lipid-A-disaccharide synthetase KAB04_02085 PF07715 TonB-dependent Receptor Plug Domain KAB04_02085 PF00593 TonB dependent receptor KAB04_02089 PF01925 Sulfite exporter TauE/SafE KAB04_02090 PF00793 DAHP synthetase I family KAB04_02091 PF02654 Cobalamin-5-phosphate synthase KAB04_02094 PF02277 Phosphoribosyltransferase KAB04_02095 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KAB04_02097 PF13419 Haloacid dehalogenase-like hydrolase KAB04_02102 PF00593 TonB dependent receptor KAB04_02102 PF07715 TonB-dependent Receptor Plug Domain KAB04_02105 PF04183 IucA / IucC family KAB04_02105 PF06276 Ferric iron reductase FhuF-like transporter KAB04_02106 PF06276 Ferric iron reductase FhuF-like transporter KAB04_02106 PF04183 IucA / IucC family KAB04_02107 PF07690 Major Facilitator Superfamily KAB04_02108 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB04_02109 PF04183 IucA / IucC family KAB04_02109 PF06276 Ferric iron reductase FhuF-like transporter KAB04_02110 PF04073 Aminoacyl-tRNA editing domain KAB04_02112 PF03109 ABC1 family KAB04_02113 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02113 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02113 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02114 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02114 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02114 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02115 PF00487 Fatty acid desaturase KAB04_02116 PF12852 Cupin KAB04_02116 PF12833 Helix-turn-helix domain KAB04_02117 PF00639 PPIC-type PPIASE domain KAB04_02117 PF09312 SurA N-terminal domain KAB04_02118 PF00216 Bacterial DNA-binding protein KAB04_02121 PF02082 Transcriptional regulator KAB04_02122 PF00266 Aminotransferase class-V KAB04_02123 PF01592 NifU-like N terminal domain KAB04_02124 PF01521 Iron-sulphur cluster biosynthesis KAB04_02125 PF00226 DnaJ domain KAB04_02125 PF07743 HSCB C-terminal oligomerisation domain KAB04_02126 PF00012 Hsp70 protein KAB04_02127 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_02128 PF00211 Adenylate and Guanylate cyclase catalytic domain KAB04_02130 PF02559 CarD-like/TRCF domain KAB04_02130 PF17757 UvrB interaction domain KAB04_02130 PF00271 Helicase conserved C-terminal domain KAB04_02130 PF00270 DEAD/DEAH box helicase KAB04_02130 PF03461 TRCF domain KAB04_02134 PF03737 Aldolase/RraA KAB04_02135 PF13460 NAD(P)H-binding KAB04_02136 PF01649 Ribosomal protein S20 KAB04_02138 PF00459 Inositol monophosphatase family KAB04_02141 PF00005 ABC transporter KAB04_02141 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB04_02142 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02143 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02144 PF01432 Peptidase family M3 KAB04_02148 PF07715 TonB-dependent Receptor Plug Domain KAB04_02148 PF00593 TonB dependent receptor KAB04_02150 PF01618 MotA/TolQ/ExbB proton channel family KAB04_02151 PF02472 Biopolymer transport protein ExbD/TolR KAB04_02152 PF02472 Biopolymer transport protein ExbD/TolR KAB04_02154 PF01274 Malate synthase KAB04_02155 PF03969 AFG1-like ATPase KAB04_02157 PF00743 Flavin-binding monooxygenase-like KAB04_02159 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB04_02161 PF00216 Bacterial DNA-binding protein KAB04_02162 PF00575 S1 RNA binding domain KAB04_02163 PF02224 Cytidylate kinase KAB04_02165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB04_02167 PF03167 Uracil DNA glycosylase superfamily KAB04_02169 PF03934 Type II secretion system (T2SS), protein K KAB04_02170 PF11612 Type II secretion system (T2SS), protein J KAB04_02170 PF07963 Prokaryotic N-terminal methylation motif KAB04_02171 PF07963 Prokaryotic N-terminal methylation motif KAB04_02171 PF02501 Type II secretion system (T2SS), protein I KAB04_02174 PF01026 TatD related DNase KAB04_02176 PF09115 DNA polymerase III, delta subunit, C terminal KAB04_02177 PF02348 Cytidylyltransferase KAB04_02178 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAB04_02179 PF00005 ABC transporter KAB04_02179 PF00664 ABC transporter transmembrane region KAB04_02181 PF01618 MotA/TolQ/ExbB proton channel family KAB04_02182 PF02195 ParB-like nuclease domain KAB04_02182 PF17762 HTH domain found in ParB protein KAB04_02183 PF13614 AAA domain KAB04_02184 PF02527 rRNA small subunit methyltransferase G KAB04_02185 PF00483 Nucleotidyl transferase KAB04_02186 PF01636 Phosphotransferase enzyme family KAB04_02187 PF04453 LPS transport system D KAB04_02187 PF03968 OstA-like protein KAB04_02188 PF00639 PPIC-type PPIASE domain KAB04_02188 PF09312 SurA N-terminal domain KAB04_02189 PF01116 Fructose-bisphosphate aldolase class-II KAB04_02191 PF00162 Phosphoglycerate kinase KAB04_02193 PF02545 Maf-like protein KAB04_02194 PF08007 Cupin superfamily protein KAB04_02197 PF00375 Sodium:dicarboxylate symporter family KAB04_02198 PF06912 Protein of unknown function (DUF1275) KAB04_02199 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KAB04_02200 PF00664 ABC transporter transmembrane region KAB04_02200 PF00005 ABC transporter KAB04_02202 PF12833 Helix-turn-helix domain KAB04_02202 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB04_02203 PF01597 Glycine cleavage H-protein KAB04_02204 PF02146 Sir2 family KAB04_02205 PF00474 Sodium:solute symporter family KAB04_02206 PF01037 Lrp/AsnC ligand binding domain KAB04_02207 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KAB04_02207 PF01619 Proline dehydrogenase KAB04_02207 PF00171 Aldehyde dehydrogenase family KAB04_02207 PF14850 DNA-binding domain of Proline dehydrogenase KAB04_02208 PF04229 GrpB protein KAB04_02209 PF05958 tRNA (Uracil-5-)-methyltransferase KAB04_02211 PF09992 Phosphodiester glycosidase KAB04_02213 PF04264 YceI-like domain KAB04_02215 PF00456 Transketolase, thiamine diphosphate binding domain KAB04_02215 PF02779 Transketolase, pyrimidine binding domain KAB04_02215 PF02780 Transketolase, C-terminal domain KAB04_02216 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAB04_02216 PF02772 S-adenosylmethionine synthetase, central domain KAB04_02216 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAB04_02220 PF00905 Penicillin binding protein transpeptidase domain KAB04_02223 PF02075 Crossover junction endodeoxyribonuclease RuvC KAB04_02224 PF03853 YjeF-related protein N-terminus KAB04_02224 PF01256 Carbohydrate kinase KAB04_02225 PF08331 Domain of unknown function (DUF1730) KAB04_02226 PF04055 Radical SAM superfamily KAB04_02226 PF06968 Biotin and Thiamin Synthesis associated domain KAB04_02229 PF16970 Type-1 fimbrial protein, A KAB04_02230 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB04_02230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB04_02231 PF13954 PapC N-terminal domain KAB04_02231 PF00577 Outer membrane usher protein KAB04_02231 PF13953 PapC C-terminal domain KAB04_02235 PF00892 EamA-like transporter family KAB04_02237 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB04_02239 PF03466 LysR substrate binding domain KAB04_02239 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02244 PF00440 Bacterial regulatory proteins, tetR family KAB04_02246 PF01709 Transcriptional regulator KAB04_02249 PF01037 Lrp/AsnC ligand binding domain KAB04_02251 PF00005 ABC transporter KAB04_02252 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02253 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02256 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02256 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02258 PF00296 Luciferase-like monooxygenase KAB04_02259 PF03180 NLPA lipoprotein KAB04_02260 PF03180 NLPA lipoprotein KAB04_02261 PF09383 NIL domain KAB04_02261 PF00005 ABC transporter KAB04_02262 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02263 PF06071 Protein of unknown function (DUF933) KAB04_02263 PF01926 50S ribosome-binding GTPase KAB04_02268 PF03591 AzlC protein KAB04_02269 PF05437 Branched-chain amino acid transport protein (AzlD) KAB04_02271 PF02222 ATP-grasp domain KAB04_02272 PF08335 GlnD PII-uridylyltransferase KAB04_02272 PF01909 Nucleotidyltransferase domain KAB04_02272 PF01966 HD domain KAB04_02273 PF00155 Aminotransferase class I and II KAB04_02275 PF12833 Helix-turn-helix domain KAB04_02275 PF12852 Cupin KAB04_02276 PF00255 Glutathione peroxidase KAB04_02277 PF01641 SelR domain KAB04_02278 PF00155 Aminotransferase class I and II KAB04_02279 PF00375 Sodium:dicarboxylate symporter family KAB04_02280 PF00710 Asparaginase, N-terminal KAB04_02280 PF17763 Glutaminase/Asparaginase C-terminal domain KAB04_02281 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAB04_02281 PF01336 OB-fold nucleic acid binding domain KAB04_02281 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAB04_02281 PF02811 PHP domain KAB04_02281 PF14579 Helix-hairpin-helix motif KAB04_02282 PF00588 SpoU rRNA Methylase family KAB04_02283 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_02286 PF13192 Thioredoxin domain KAB04_02286 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02289 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02289 PF03466 LysR substrate binding domain KAB04_02290 PF01758 Sodium Bile acid symporter family KAB04_02291 PF01022 Bacterial regulatory protein, arsR family KAB04_02292 PF03960 ArsC family KAB04_02294 PF13382 Adenine deaminase C-terminal domain KAB04_02294 PF01979 Amidohydrolase family KAB04_02296 PF03466 LysR substrate binding domain KAB04_02296 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02298 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB04_02299 PF01177 Asp/Glu/Hydantoin racemase KAB04_02300 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KAB04_02301 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02302 PF00005 ABC transporter KAB04_02303 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB04_02306 PF00083 Sugar (and other) transporter KAB04_02307 PF00296 Luciferase-like monooxygenase KAB04_02308 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02308 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02308 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02311 PF01654 Cytochrome bd terminal oxidase subunit I KAB04_02312 PF02322 Cytochrome bd terminal oxidase subunit II KAB04_02314 PF00155 Aminotransferase class I and II KAB04_02314 PF00392 Bacterial regulatory proteins, gntR family KAB04_02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02315 PF03466 LysR substrate binding domain KAB04_02318 PF00698 Acyl transferase domain KAB04_02319 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KAB04_02321 PF01039 Carboxyl transferase domain KAB04_02322 PF06857 Malonate decarboxylase delta subunit (MdcD) KAB04_02323 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KAB04_02324 PF16957 Malonate decarboxylase, alpha subunit, transporter KAB04_02325 PF07690 Major Facilitator Superfamily KAB04_02328 PF00392 Bacterial regulatory proteins, gntR family KAB04_02328 PF00155 Aminotransferase class I and II KAB04_02329 PF04172 LrgB-like family KAB04_02330 PF03788 LrgA family KAB04_02331 PF03466 LysR substrate binding domain KAB04_02331 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02332 PF02798 Glutathione S-transferase, N-terminal domain KAB04_02332 PF14834 Glutathione S-transferase, C-terminal domain KAB04_02333 PF02798 Glutathione S-transferase, N-terminal domain KAB04_02334 PF03466 LysR substrate binding domain KAB04_02334 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02336 PF00581 Rhodanese-like domain KAB04_02337 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_02339 PF00266 Aminotransferase class-V KAB04_02340 PF01810 LysE type translocator KAB04_02341 PF03466 LysR substrate binding domain KAB04_02341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02342 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB04_02343 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB04_02344 PF00005 ABC transporter KAB04_02345 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02346 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02348 PF00072 Response regulator receiver domain KAB04_02349 PF00512 His Kinase A (phospho-acceptor) domain KAB04_02349 PF00072 Response regulator receiver domain KAB04_02349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_02349 PF09308 LuxQ, periplasmic KAB04_02351 PF13404 AsnC-type helix-turn-helix domain KAB04_02351 PF01037 Lrp/AsnC ligand binding domain KAB04_02353 PF00717 Peptidase S24-like KAB04_02358 PF06628 Catalase-related immune-responsive KAB04_02358 PF00199 Catalase KAB04_02358 PF18011 C-terminal domain found in long catalases KAB04_02360 PF00994 Probable molybdopterin binding domain KAB04_02360 PF18146 Damage-inducible protein CinA KH domain KAB04_02360 PF02464 Competence-damaged protein KAB04_02368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02368 PF03466 LysR substrate binding domain KAB04_02372 PF00501 AMP-binding enzyme KAB04_02372 PF13193 AMP-binding enzyme C-terminal domain KAB04_02373 PF00440 Bacterial regulatory proteins, tetR family KAB04_02374 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02374 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02374 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02375 PF01039 Carboxyl transferase domain KAB04_02376 PF00378 Enoyl-CoA hydratase/isomerase KAB04_02377 PF00364 Biotin-requiring enzyme KAB04_02377 PF02785 Biotin carboxylase C-terminal domain KAB04_02377 PF00289 Biotin carboxylase, N-terminal domain KAB04_02377 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB04_02378 PF00682 HMGL-like KAB04_02379 PF03466 LysR substrate binding domain KAB04_02379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02382 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB04_02382 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02384 PF07690 Major Facilitator Superfamily KAB04_02386 PF01144 Coenzyme A transferase KAB04_02387 PF01144 Coenzyme A transferase KAB04_02388 PF07690 Major Facilitator Superfamily KAB04_02389 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02389 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02389 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02390 PF00378 Enoyl-CoA hydratase/isomerase KAB04_02392 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB04_02392 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB04_02392 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB04_02393 PF02803 Thiolase, C-terminal domain KAB04_02393 PF00108 Thiolase, N-terminal domain KAB04_02394 PF09339 IclR helix-turn-helix domain KAB04_02395 PF07690 Major Facilitator Superfamily KAB04_02396 PF03060 Nitronate monooxygenase KAB04_02397 PF00378 Enoyl-CoA hydratase/isomerase KAB04_02398 PF09339 IclR helix-turn-helix domain KAB04_02399 PF02515 CoA-transferase family III KAB04_02400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_02400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_02400 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_02401 PF07690 Major Facilitator Superfamily KAB04_02402 PF13419 Haloacid dehalogenase-like hydrolase KAB04_02403 PF00266 Aminotransferase class-V KAB04_02404 PF01266 FAD dependent oxidoreductase KAB04_02405 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02406 PF00005 ABC transporter KAB04_02406 PF08402 TOBE domain KAB04_02408 PF07702 UTRA domain KAB04_02408 PF00392 Bacterial regulatory proteins, gntR family KAB04_02409 PF01494 FAD binding domain KAB04_02410 PF09339 IclR helix-turn-helix domain KAB04_02410 PF01614 Bacterial transcriptional regulator KAB04_02411 PF02525 Flavodoxin-like fold KAB04_02412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02412 PF03466 LysR substrate binding domain KAB04_02413 PF02627 Carboxymuconolactone decarboxylase family KAB04_02414 PF00171 Aldehyde dehydrogenase family KAB04_02416 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB04_02417 PF00171 Aldehyde dehydrogenase family KAB04_02418 PF00296 Luciferase-like monooxygenase KAB04_02419 PF01613 Flavin reductase like domain KAB04_02420 PF12697 Alpha/beta hydrolase family KAB04_02424 PF01292 Prokaryotic cytochrome b561 KAB04_02425 PF00199 Catalase KAB04_02432 PF03061 Thioesterase superfamily KAB04_02433 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_02434 PF07848 PaaX-like protein KAB04_02434 PF08223 PaaX-like protein C-terminal domain KAB04_02435 PF14535 AMP-binding enzyme C-terminal domain KAB04_02435 PF00501 AMP-binding enzyme KAB04_02436 PF00108 Thiolase, N-terminal domain KAB04_02436 PF02803 Thiolase, C-terminal domain KAB04_02437 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB04_02437 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB04_02437 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB04_02438 PF00378 Enoyl-CoA hydratase/isomerase KAB04_02439 PF00378 Enoyl-CoA hydratase/isomerase KAB04_02440 PF00175 Oxidoreductase NAD-binding domain KAB04_02440 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_02440 PF00970 Oxidoreductase FAD-binding domain KAB04_02441 PF01883 Iron-sulfur cluster assembly protein KAB04_02442 PF05138 Phenylacetic acid catabolic protein KAB04_02443 PF06243 Phenylacetic acid degradation B KAB04_02444 PF05138 Phenylacetic acid catabolic protein KAB04_02445 PF00171 Aldehyde dehydrogenase family KAB04_02445 PF01575 MaoC like domain KAB04_02446 PF03313 Serine dehydratase alpha chain KAB04_02446 PF03315 Serine dehydratase beta chain KAB04_02447 PF13520 Amino acid permease KAB04_02448 PF00171 Aldehyde dehydrogenase family KAB04_02449 PF00083 Sugar (and other) transporter KAB04_02451 PF04324 BFD-like [2Fe-2S] binding domain KAB04_02451 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02453 PF01266 FAD dependent oxidoreductase KAB04_02454 PF05544 Proline racemase KAB04_02455 PF00392 Bacterial regulatory proteins, gntR family KAB04_02457 PF00701 Dihydrodipicolinate synthetase family KAB04_02460 PF09278 MerR, DNA binding KAB04_02460 PF00376 MerR family regulatory protein KAB04_02465 PF00005 ABC transporter KAB04_02466 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB04_02467 PF01425 Amidase KAB04_02468 PF01402 Ribbon-helix-helix protein, copG family KAB04_02468 PF08753 NikR C terminal nickel binding domain KAB04_02471 PF01638 HxlR-like helix-turn-helix KAB04_02472 PF02525 Flavodoxin-like fold KAB04_02473 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB04_02473 PF00289 Biotin carboxylase, N-terminal domain KAB04_02473 PF02785 Biotin carboxylase C-terminal domain KAB04_02476 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_02476 PF00107 Zinc-binding dehydrogenase KAB04_02476 PF13823 Alcohol dehydrogenase GroES-associated KAB04_02478 PF00440 Bacterial regulatory proteins, tetR family KAB04_02483 PF00654 Voltage gated chloride channel KAB04_02484 PF00289 Biotin carboxylase, N-terminal domain KAB04_02484 PF02785 Biotin carboxylase C-terminal domain KAB04_02484 PF00364 Biotin-requiring enzyme KAB04_02484 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB04_02486 PF07286 Protein of unknown function (DUF1445) KAB04_02487 PF03746 LamB/YcsF family KAB04_02488 PF01566 Natural resistance-associated macrophage protein KAB04_02489 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02489 PF03466 LysR substrate binding domain KAB04_02492 PF05593 RHS Repeat KAB04_02492 PF03527 RHS protein KAB04_02492 PF14220 Domain of unknown function (DUF4329) KAB04_02493 PF16671 Actin cross-linking domain KAB04_02493 PF04717 Type VI secretion system, phage-baseplate injector KAB04_02495 PF13419 Haloacid dehalogenase-like hydrolase KAB04_02498 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB04_02498 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB04_02502 PF07690 Major Facilitator Superfamily KAB04_02504 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB04_02505 PF03707 Bacterial signalling protein N terminal repeat KAB04_02505 PF00990 Diguanylate cyclase, GGDEF domain KAB04_02505 PF00563 EAL domain KAB04_02506 PF00892 EamA-like transporter family KAB04_02507 PF01037 Lrp/AsnC ligand binding domain KAB04_02508 PF00488 MutS domain V KAB04_02508 PF01624 MutS domain I KAB04_02508 PF05188 MutS domain II KAB04_02508 PF05192 MutS domain III KAB04_02508 PF05190 MutS family domain IV KAB04_02510 PF00037 4Fe-4S binding domain KAB04_02510 PF11953 Domain of unknown function (DUF3470) KAB04_02512 PF01596 O-methyltransferase KAB04_02514 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_02515 PF01205 Uncharacterized protein family UPF0029 KAB04_02517 PF00664 ABC transporter transmembrane region KAB04_02517 PF03412 Peptidase C39 family KAB04_02517 PF00005 ABC transporter KAB04_02518 PF02321 Outer membrane efflux protein KAB04_02519 PF00005 ABC transporter KAB04_02519 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAB04_02520 PF03968 OstA-like protein KAB04_02523 PF00571 CBS domain KAB04_02523 PF01380 SIS domain KAB04_02524 PF09190 DALR domain KAB04_02524 PF01406 tRNA synthetases class I (C) catalytic domain KAB04_02530 PF01638 HxlR-like helix-turn-helix KAB04_02531 PF07690 Major Facilitator Superfamily KAB04_02536 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB04_02536 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB04_02538 PF00313 'Cold-shock' DNA-binding domain KAB04_02539 PF01810 LysE type translocator KAB04_02546 PF13742 OB-fold nucleic acid binding domain KAB04_02546 PF02601 Exonuclease VII, large subunit KAB04_02553 PF09278 MerR, DNA binding KAB04_02553 PF00376 MerR family regulatory protein KAB04_02554 PF00403 Heavy-metal-associated domain KAB04_02556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02556 PF03466 LysR substrate binding domain KAB04_02557 PF00355 Rieske [2Fe-2S] domain KAB04_02557 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB04_02558 PF00866 Ring hydroxylating beta subunit KAB04_02559 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_02559 PF00970 Oxidoreductase FAD-binding domain KAB04_02559 PF00175 Oxidoreductase NAD-binding domain KAB04_02560 PF00106 short chain dehydrogenase KAB04_02561 PF03594 Benzoate membrane transport protein KAB04_02562 PF07690 Major Facilitator Superfamily KAB04_02564 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAB04_02564 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAB04_02565 PF00270 DEAD/DEAH box helicase KAB04_02565 PF04408 Helicase associated domain (HA2) KAB04_02565 PF00271 Helicase conserved C-terminal domain KAB04_02565 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KAB04_02565 PF11898 Domain of unknown function (DUF3418) KAB04_02566 PF00578 AhpC/TSA family KAB04_02566 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB04_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02570 PF13192 Thioredoxin domain KAB04_02572 PF00043 Glutathione S-transferase, C-terminal domain KAB04_02572 PF02798 Glutathione S-transferase, N-terminal domain KAB04_02574 PF02390 Putative methyltransferase KAB04_02575 PF13417 Glutathione S-transferase, N-terminal domain KAB04_02575 PF00043 Glutathione S-transferase, C-terminal domain KAB04_02577 PF00691 OmpA family KAB04_02577 PF13488 Glycine zipper KAB04_02578 PF01979 Amidohydrolase family KAB04_02579 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB04_02579 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB04_02581 PF10672 S-adenosylmethionine-dependent methyltransferase KAB04_02581 PF02926 THUMP domain KAB04_02581 PF01170 Putative RNA methylase family UPF0020 KAB04_02584 PF17871 AAA lid domain KAB04_02584 PF10431 C-terminal, D2-small domain, of ClpB protein KAB04_02584 PF07724 AAA domain (Cdc48 subfamily) KAB04_02584 PF00004 ATPase family associated with various cellular activities (AAA) KAB04_02584 PF02861 Clp amino terminal domain, pathogenicity island component KAB04_02587 PF02566 OsmC-like protein KAB04_02588 PF00027 Cyclic nucleotide-binding domain KAB04_02588 PF13545 Crp-like helix-turn-helix domain KAB04_02591 PF00248 Aldo/keto reductase family KAB04_02594 PF00709 Adenylosuccinate synthetase KAB04_02595 PF13393 Histidyl-tRNA synthetase KAB04_02596 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB04_02596 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB04_02597 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB04_02597 PF02272 DHHA1 domain KAB04_02597 PF01411 tRNA synthetases class II (A) KAB04_02598 PF13840 ACT domain KAB04_02598 PF01842 ACT domain KAB04_02598 PF00696 Amino acid kinase family KAB04_02599 PF02599 Global regulator protein family KAB04_02600 PF01351 Ribonuclease HII KAB04_02602 PF01292 Prokaryotic cytochrome b561 KAB04_02603 PF00962 Adenosine/AMP deaminase KAB04_02604 PF00860 Permease family KAB04_02606 PF00743 Flavin-binding monooxygenase-like KAB04_02607 PF00106 short chain dehydrogenase KAB04_02609 PF02678 Pirin KAB04_02609 PF17954 Quercetinase C-terminal cupin domain KAB04_02610 PF17932 Tetracyclin repressor-like, C-terminal domain KAB04_02610 PF00440 Bacterial regulatory proteins, tetR family KAB04_02612 PF00106 short chain dehydrogenase KAB04_02613 PF00743 Flavin-binding monooxygenase-like KAB04_02614 PF13610 DDE domain KAB04_02615 PF05593 RHS Repeat KAB04_02615 PF03527 RHS protein KAB04_02616 PF04717 Type VI secretion system, phage-baseplate injector KAB04_02616 PF16671 Actin cross-linking domain KAB04_02619 PF03180 NLPA lipoprotein KAB04_02620 PF05987 Bacterial protein of unknown function (DUF898) KAB04_02623 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02623 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB04_02624 PF00764 Arginosuccinate synthase KAB04_02625 PF00360 Phytochrome region KAB04_02625 PF00563 EAL domain KAB04_02625 PF00990 Diguanylate cyclase, GGDEF domain KAB04_02625 PF01590 GAF domain KAB04_02626 PF01979 Amidohydrolase family KAB04_02627 PF00929 Exonuclease KAB04_02629 PF00593 TonB dependent receptor KAB04_02629 PF07715 TonB-dependent Receptor Plug Domain KAB04_02630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB04_02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02631 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB04_02631 PF00005 ABC transporter KAB04_02632 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02632 PF12911 N-terminal TM domain of oligopeptide transport permease C KAB04_02633 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_02634 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAB04_02635 PF01464 Transglycosylase SLT domain KAB04_02635 PF01476 LysM domain KAB04_02635 PF01464 Transglycosylase SLT domain KAB04_02635 PF01476 LysM domain KAB04_02636 PF00929 Exonuclease KAB04_02638 PF00293 NUDIX domain KAB04_02638 PF09297 NADH pyrophosphatase zinc ribbon domain KAB04_02640 PF04972 BON domain KAB04_02641 PF02021 Uncharacterised protein family UPF0102 KAB04_02642 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB04_02644 PF03466 LysR substrate binding domain KAB04_02644 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02645 PF01810 LysE type translocator KAB04_02647 PF13411 MerR HTH family regulatory protein KAB04_02649 PF01494 FAD binding domain KAB04_02650 PF01494 FAD binding domain KAB04_02651 PF00557 Metallopeptidase family M24 KAB04_02651 PF05195 Aminopeptidase P, N-terminal domain KAB04_02658 PF08019 Phosphoethanolamine transferase EptA/EptB KAB04_02658 PF00884 Sulfatase KAB04_02667 PF01551 Peptidase family M23 KAB04_02667 PF08525 Opacity-associated protein A N-terminal motif KAB04_02667 PF01476 LysM domain KAB04_02700 PF13737 Transposase DDE domain KAB04_02702 PF13737 Transposase DDE domain KAB04_02736 PF01812 5-formyltetrahydrofolate cyclo-ligase family KAB04_02738 PF05662 Coiled stalk of trimeric autotransporter adhesin KAB04_02738 PF05658 Head domain of trimeric autotransporter adhesin KAB04_02738 PF03895 YadA-like membrane anchor domain KAB04_02738 PF13018 Extended Signal Peptide of Type V secretion system KAB04_02739 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAB04_02739 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB04_02739 PF00004 ATPase family associated with various cellular activities (AAA) KAB04_02740 PF02590 Predicted SPOUT methyltransferase KAB04_02741 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAB04_02743 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB04_02743 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB04_02744 PF04060 Putative Fe-S cluster KAB04_02745 PF00633 Helix-hairpin-helix motif KAB04_02745 PF10576 Iron-sulfur binding domain of endonuclease III KAB04_02745 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB04_02746 PF05191 Adenylate kinase, active site lid KAB04_02749 PF00905 Penicillin binding protein transpeptidase domain KAB04_02749 PF03717 Penicillin-binding Protein dimerisation domain KAB04_02752 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB04_02753 PF01730 UreF KAB04_02754 PF05194 UreE urease accessory protein, C-terminal domain KAB04_02754 PF02814 UreE urease accessory protein, N-terminal domain KAB04_02755 PF00449 Urease alpha-subunit, N-terminal domain KAB04_02755 PF01979 Amidohydrolase family KAB04_02756 PF01979 Amidohydrolase family KAB04_02756 PF00449 Urease alpha-subunit, N-terminal domain KAB04_02757 PF00699 Urease beta subunit KAB04_02758 PF00547 Urease, gamma subunit KAB04_02759 PF01774 UreD urease accessory protein KAB04_02762 PF00463 Isocitrate lyase family KAB04_02763 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02763 PF03466 LysR substrate binding domain KAB04_02764 PF00571 CBS domain KAB04_02764 PF03471 Transporter associated domain KAB04_02764 PF01595 Cyclin M transmembrane N-terminal domain KAB04_02765 PF03600 Citrate transporter KAB04_02768 PF00009 Elongation factor Tu GTP binding domain KAB04_02769 PF01507 Phosphoadenosine phosphosulfate reductase family KAB04_02771 PF14052 Capsule assembly protein Wzi KAB04_02772 PF01336 OB-fold nucleic acid binding domain KAB04_02772 PF00152 tRNA synthetases class II (D, K and N) KAB04_02775 PF00301 Rubredoxin KAB04_02776 PF18113 Rubredoxin binding C-terminal domain KAB04_02776 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02777 PF00561 alpha/beta hydrolase fold KAB04_02778 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02778 PF03466 LysR substrate binding domain KAB04_02780 PF02503 Polyphosphate kinase middle domain KAB04_02780 PF13090 Polyphosphate kinase C-terminal domain 2 KAB04_02780 PF17941 Polyphosphate kinase C-terminal domain 1 KAB04_02780 PF13089 Polyphosphate kinase N-terminal domain KAB04_02781 PF00912 Transglycosylase KAB04_02782 PF01694 Rhomboid family KAB04_02784 PF00005 ABC transporter KAB04_02785 PF13472 GDSL-like Lipase/Acylhydrolase family KAB04_02786 PF00484 Carbonic anhydrase KAB04_02787 PF00561 alpha/beta hydrolase fold KAB04_02789 PF07715 TonB-dependent Receptor Plug Domain KAB04_02789 PF00593 TonB dependent receptor KAB04_02790 PF01106 NifU-like domain KAB04_02790 PF01521 Iron-sulphur cluster biosynthesis KAB04_02792 PF00884 Sulfatase KAB04_02793 PF03781 Sulfatase-modifying factor enzyme 1 KAB04_02796 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_02797 PF01384 Phosphate transporter family KAB04_02798 PF02310 B12 binding domain KAB04_02798 PF02574 Homocysteine S-methyltransferase KAB04_02798 PF00809 Pterin binding enzyme KAB04_02798 PF02607 B12 binding domain KAB04_02798 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAB04_02799 PF02780 Transketolase, C-terminal domain KAB04_02799 PF02779 Transketolase, pyrimidine binding domain KAB04_02800 PF00456 Transketolase, thiamine diphosphate binding domain KAB04_02801 PF07690 Major Facilitator Superfamily KAB04_02803 PF03466 LysR substrate binding domain KAB04_02803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_02805 PF01263 Aldose 1-epimerase KAB04_02806 PF07690 Major Facilitator Superfamily KAB04_02807 PF02311 AraC-like ligand binding domain KAB04_02807 PF12833 Helix-turn-helix domain KAB04_02808 PF04960 Glutaminase KAB04_02809 PF01327 Polypeptide deformylase KAB04_02810 PF07690 Major Facilitator Superfamily KAB04_02812 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB04_02812 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB04_02812 PF00205 Thiamine pyrophosphate enzyme, central domain KAB04_02813 PF00171 Aldehyde dehydrogenase family KAB04_02814 PF03447 Homoserine dehydrogenase, NAD binding domain KAB04_02814 PF01958 Domain of unknown function DUF108 KAB04_02816 PF12697 Alpha/beta hydrolase family KAB04_02818 PF07690 Major Facilitator Superfamily KAB04_02819 PF14759 Reductase C-terminal KAB04_02819 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_02820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB04_02822 PF00355 Rieske [2Fe-2S] domain KAB04_02824 PF00355 Rieske [2Fe-2S] domain KAB04_02825 PF09339 IclR helix-turn-helix domain KAB04_02825 PF01614 Bacterial transcriptional regulator KAB04_02828 PF00378 Enoyl-CoA hydratase/isomerase KAB04_02830 PF00535 Glycosyl transferase family 2 KAB04_02831 PF01522 Polysaccharide deacetylase KAB04_02831 PF14883 Hypothetical glycosyl hydrolase family 13 KAB04_02832 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB04_02833 PF07152 YaeQ protein KAB04_02834 PF00375 Sodium:dicarboxylate symporter family KAB04_02835 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB04_02835 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB04_02837 PF03061 Thioesterase superfamily KAB04_02839 PF02028 BCCT, betaine/carnitine/choline family transporter KAB04_02840 PF02028 BCCT, betaine/carnitine/choline family transporter KAB04_02841 PF13977 BetI-type transcriptional repressor, C-terminal KAB04_02841 PF00440 Bacterial regulatory proteins, tetR family KAB04_02842 PF00171 Aldehyde dehydrogenase family KAB04_02843 PF00732 GMC oxidoreductase KAB04_02843 PF05199 GMC oxidoreductase KAB04_02844 PF06039 Malate:quinone oxidoreductase (Mqo) KAB04_02846 PF02574 Homocysteine S-methyltransferase KAB04_02847 PF13520 Amino acid permease KAB04_02852 PF01126 Heme oxygenase KAB04_02856 PF00593 TonB dependent receptor KAB04_02856 PF07715 TonB-dependent Receptor Plug Domain KAB04_02858 PF04542 Sigma-70 region 2 KAB04_02858 PF08281 Sigma-70, region 4 KAB04_02860 PF00701 Dihydrodipicolinate synthetase family KAB04_02861 PF00083 Sugar (and other) transporter KAB04_02888 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB04_02888 PF02767 DNA polymerase III beta subunit, central domain KAB04_02888 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB04_02896 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KAB04_02907 PF13737 Transposase DDE domain KAB04_02934 PF13737 Transposase DDE domain KAB04_02937 PF01695 IstB-like ATP binding protein KAB04_02939 PF01555 DNA methylase KAB04_02945 PF01555 DNA methylase KAB04_02946 PF00145 C-5 cytosine-specific DNA methylase KAB04_02960 PF00929 Exonuclease KAB04_02967 PF07690 Major Facilitator Superfamily KAB04_02968 PF13533 Biotin-lipoyl like KAB04_02969 PF03061 Thioesterase superfamily KAB04_02970 PF00490 Delta-aminolevulinic acid dehydratase KAB04_02971 PF01266 FAD dependent oxidoreductase KAB04_02972 PF01370 NAD dependent epimerase/dehydratase family KAB04_02972 PF08338 Domain of unknown function (DUF1731) KAB04_02976 PF12320 Type 5 capsule protein repressor C-terminal domain KAB04_02976 PF00149 Calcineurin-like phosphoesterase KAB04_02978 PF01168 Alanine racemase, N-terminal domain KAB04_02979 PF00437 Type II/IV secretion system protein KAB04_02980 PF00437 Type II/IV secretion system protein KAB04_02981 PF01475 Ferric uptake regulator family KAB04_02982 PF04355 SmpA / OmlA family KAB04_02983 PF03658 RnfH family Ubiquitin KAB04_02985 PF01814 Hemerythrin HHE cation binding domain KAB04_02986 PF13230 Glutamine amidotransferases class-II KAB04_02988 PF00696 Amino acid kinase family KAB04_02989 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB04_02989 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB04_02989 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB04_02989 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB04_02990 PF00692 dUTPase KAB04_02991 PF13361 UvrD-like helicase C-terminal domain KAB04_02991 PF00580 UvrD/REP helicase N-terminal domain KAB04_02992 PF00691 OmpA family KAB04_02992 PF13488 Glycine zipper KAB04_02993 PF01553 Acyltransferase KAB04_02995 PF03775 Septum formation inhibitor MinC, C-terminal domain KAB04_02996 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAB04_02997 PF03776 Septum formation topological specificity factor MinE KAB04_03001 PF01810 LysE type translocator KAB04_03002 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAB04_03002 PF01580 FtsK/SpoIIIE family KAB04_03002 PF17854 FtsK alpha domain KAB04_03002 PF09397 Ftsk gamma domain KAB04_03003 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB04_03004 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KAB04_03005 PF04376 Arginine-tRNA-protein transferase, N terminus KAB04_03005 PF04377 Arginine-tRNA-protein transferase, C terminus KAB04_03006 PF00583 Acetyltransferase (GNAT) family KAB04_03009 PF00009 Elongation factor Tu GTP binding domain KAB04_03009 PF03144 Elongation factor Tu domain 2 KAB04_03009 PF03143 Elongation factor Tu C-terminal domain KAB04_03010 PF03764 Elongation factor G, domain IV KAB04_03010 PF00009 Elongation factor Tu GTP binding domain KAB04_03010 PF03144 Elongation factor Tu domain 2 KAB04_03010 PF14492 Elongation Factor G, domain II KAB04_03010 PF00679 Elongation factor G C-terminus KAB04_03011 PF00177 Ribosomal protein S7p/S5e KAB04_03012 PF00164 Ribosomal protein S12/S23 KAB04_03014 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_03014 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_03016 PF05726 Pirin C-terminal cupin domain KAB04_03016 PF02678 Pirin KAB04_03018 PF00795 Carbon-nitrogen hydrolase KAB04_03018 PF02540 NAD synthase KAB04_03021 PF00970 Oxidoreductase FAD-binding domain KAB04_03021 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB04_03021 PF00175 Oxidoreductase NAD-binding domain KAB04_03022 PF00171 Aldehyde dehydrogenase family KAB04_03023 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB04_03023 PF00355 Rieske [2Fe-2S] domain KAB04_03024 PF07859 alpha/beta hydrolase fold KAB04_03025 PF02028 BCCT, betaine/carnitine/choline family transporter KAB04_03026 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB04_03027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03027 PF03466 LysR substrate binding domain KAB04_03030 PF00037 4Fe-4S binding domain KAB04_03031 PF01467 Cytidylyltransferase-like KAB04_03032 PF01668 SmpB protein KAB04_03033 PF03358 NADPH-dependent FMN reductase KAB04_03035 PF00849 RNA pseudouridylate synthase KAB04_03035 PF01479 S4 domain KAB04_03036 PF13525 Outer membrane lipoprotein KAB04_03037 PF10410 DnaB-helicase binding domain of primase KAB04_03037 PF08275 DNA primase catalytic core, N-terminal domain KAB04_03037 PF08278 DNA primase DnaG DnaB-binding KAB04_03037 PF01807 CHC2 zinc finger KAB04_03038 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAB04_03038 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAB04_03038 PF01488 Shikimate / quinate 5-dehydrogenase KAB04_03040 PF03550 Outer membrane lipoprotein LolB KAB04_03045 PF14572 Phosphoribosyl synthetase-associated domain KAB04_03045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB04_03046 PF01386 Ribosomal L25p family KAB04_03047 PF01195 Peptidyl-tRNA hydrolase KAB04_03048 PF02261 Aspartate decarboxylase KAB04_03051 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB04_03055 PF08543 Phosphomethylpyrimidine kinase KAB04_03055 PF03070 TENA/THI-4/PQQC family KAB04_03055 PF02581 Thiamine monophosphate synthase KAB04_03056 PF04972 BON domain KAB04_03056 PF01476 LysM domain KAB04_03057 PF00550 Phosphopantetheine attachment site KAB04_03059 PF00698 Acyl transferase domain KAB04_03060 PF01783 Ribosomal L32p protein family KAB04_03061 PF02620 Large ribosomal RNA subunit accumulation protein YceD KAB04_03062 PF04315 Elongation factor P hydroxylase KAB04_03063 PF01300 Telomere recombination KAB04_03064 PF02616 Segregation and condensation protein ScpA KAB04_03065 PF04079 Segregation and condensation complex subunit ScpB KAB04_03066 PF01479 S4 domain KAB04_03066 PF00849 RNA pseudouridylate synthase KAB04_03069 PF00155 Aminotransferase class I and II KAB04_03070 PF00202 Aminotransferase class-III KAB04_03070 PF06968 Biotin and Thiamin Synthesis associated domain KAB04_03070 PF04055 Radical SAM superfamily KAB04_03071 PF08241 Methyltransferase domain KAB04_03071 PF12697 Alpha/beta hydrolase family KAB04_03072 PF02358 Trehalose-phosphatase KAB04_03073 PF00982 Glycosyltransferase family 20 KAB04_03074 PF07690 Major Facilitator Superfamily KAB04_03075 PF00210 Ferritin-like domain KAB04_03076 PF00533 BRCA1 C Terminus (BRCT) domain KAB04_03076 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAB04_03076 PF03120 NAD-dependent DNA ligase OB-fold domain KAB04_03076 PF01653 NAD-dependent DNA ligase adenylation domain KAB04_03076 PF12826 Helix-hairpin-helix motif KAB04_03078 PF06470 SMC proteins Flexible Hinge Domain KAB04_03078 PF02463 RecF/RecN/SMC N terminal domain KAB04_03080 PF01925 Sulfite exporter TauE/SafE KAB04_03082 PF03309 Type III pantothenate kinase KAB04_03083 PF02881 SRP54-type protein, helical bundle domain KAB04_03083 PF02978 Signal peptide binding domain KAB04_03083 PF00448 SRP54-type protein, GTPase domain KAB04_03085 PF01207 Dihydrouridine synthase (Dus) KAB04_03091 PF00692 dUTPase KAB04_03094 PF01048 Phosphorylase superfamily KAB04_03095 PF10609 NUBPL iron-transfer P-loop NTPase KAB04_03097 PF09334 tRNA synthetases class I (M) KAB04_03097 PF01588 Putative tRNA binding domain KAB04_03102 PF13533 Biotin-lipoyl like KAB04_03103 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_03106 PF05552 Conserved TM helix KAB04_03109 PF00970 Oxidoreductase FAD-binding domain KAB04_03109 PF00175 Oxidoreductase NAD-binding domain KAB04_03110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03110 PF03466 LysR substrate binding domain KAB04_03111 PF00313 'Cold-shock' DNA-binding domain KAB04_03113 PF00361 Proton-conducting membrane transporter KAB04_03114 PF00361 Proton-conducting membrane transporter KAB04_03115 PF00361 Proton-conducting membrane transporter KAB04_03115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB04_03116 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB04_03117 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KAB04_03118 PF12838 4Fe-4S dicluster domain KAB04_03119 PF00146 NADH dehydrogenase KAB04_03120 PF00384 Molybdopterin oxidoreductase KAB04_03120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB04_03120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB04_03121 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB04_03121 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAB04_03121 PF10531 SLBB domain KAB04_03123 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAB04_03123 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KAB04_03124 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAB04_03125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KAB04_03126 PF00990 Diguanylate cyclase, GGDEF domain KAB04_03126 PF17151 Periplasmic sensor domain KAB04_03128 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_03128 PF00672 HAMP domain KAB04_03128 PF00512 His Kinase A (phospho-acceptor) domain KAB04_03129 PF00072 Response regulator receiver domain KAB04_03129 PF00486 Transcriptional regulatory protein, C terminal KAB04_03130 PF03477 ATP cone domain KAB04_03130 PF02867 Ribonucleotide reductase, barrel domain KAB04_03130 PF00317 Ribonucleotide reductase, all-alpha domain KAB04_03132 PF00268 Ribonucleotide reductase, small chain KAB04_03134 PF13737 Transposase DDE domain KAB04_03135 PF00512 His Kinase A (phospho-acceptor) domain KAB04_03135 PF13756 Stimulus-sensing domain KAB04_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_03135 PF13755 Sensor N-terminal transmembrane domain KAB04_03135 PF00672 HAMP domain KAB04_03149 PF01011 PQQ enzyme repeat KAB04_03149 PF13360 PQQ-like domain KAB04_03153 PF02567 Phenazine biosynthesis-like protein KAB04_03162 PF10544 T5orf172 domain KAB04_03163 PF13614 AAA domain KAB04_03166 PF00905 Penicillin binding protein transpeptidase domain KAB04_03169 PF01613 Flavin reductase like domain KAB04_03170 PF01717 Cobalamin-independent synthase, Catalytic domain KAB04_03170 PF08267 Cobalamin-independent synthase, N-terminal domain KAB04_03172 PF03466 LysR substrate binding domain KAB04_03172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03173 PF01810 LysE type translocator KAB04_03175 PF12833 Helix-turn-helix domain KAB04_03175 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB04_03176 PF01546 Peptidase family M20/M25/M40 KAB04_03176 PF07687 Peptidase dimerisation domain KAB04_03178 PF03466 LysR substrate binding domain KAB04_03178 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03179 PF07690 Major Facilitator Superfamily KAB04_03181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03181 PF03466 LysR substrate binding domain KAB04_03182 PF14537 Cytochrome c3 KAB04_03182 PF00890 FAD binding domain KAB04_03184 PF02515 CoA-transferase family III KAB04_03185 PF07690 Major Facilitator Superfamily KAB04_03186 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_03186 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_03186 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_03187 PF03466 LysR substrate binding domain KAB04_03187 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03188 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_03188 PF00107 Zinc-binding dehydrogenase KAB04_03189 PF00962 Adenosine/AMP deaminase KAB04_03194 PF02445 Quinolinate synthetase A protein KAB04_03195 PF01960 ArgJ family KAB04_03196 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB04_03196 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB04_03197 PF00893 Small Multidrug Resistance protein KAB04_03199 PF05275 Copper resistance protein B precursor (CopB) KAB04_03200 PF00394 Multicopper oxidase KAB04_03200 PF07731 Multicopper oxidase KAB04_03200 PF07732 Multicopper oxidase KAB04_03203 PF00834 Ribulose-phosphate 3 epimerase family KAB04_03205 PF00756 Putative esterase KAB04_03206 PF00756 Putative esterase KAB04_03208 PF04445 Putative SAM-dependent methyltransferase KAB04_03209 PF00814 Glycoprotease family KAB04_03210 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_03211 PF00293 NUDIX domain KAB04_03219 PF00425 chorismate binding enzyme KAB04_03219 PF04715 Anthranilate synthase component I, N terminal region KAB04_03220 PF00155 Aminotransferase class I and II KAB04_03221 PF00815 Histidinol dehydrogenase KAB04_03222 PF01634 ATP phosphoribosyltransferase KAB04_03223 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB04_03224 PF01722 BolA-like protein KAB04_03225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAB04_03226 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAB04_03226 PF04963 Sigma-54 factor, core binding domain KAB04_03226 PF04552 Sigma-54, DNA binding domain KAB04_03235 PF00795 Carbon-nitrogen hydrolase KAB04_03237 PF01047 MarR family KAB04_03238 PF02566 OsmC-like protein KAB04_03239 PF00437 Type II/IV secretion system protein KAB04_03243 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAB04_03243 PF00476 DNA polymerase family A KAB04_03243 PF01367 5'-3' exonuclease, C-terminal SAM fold KAB04_03243 PF01612 3'-5' exonuclease KAB04_03244 PF02325 YGGT family KAB04_03245 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB04_03245 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB04_03246 PF09179 TilS substrate binding domain KAB04_03246 PF11734 TilS substrate C-terminal domain KAB04_03246 PF01171 PP-loop family KAB04_03247 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KAB04_03248 PF02541 Ppx/GppA phosphatase family KAB04_03249 PF00085 Thioredoxin KAB04_03250 PF07498 Rho termination factor, N-terminal domain KAB04_03250 PF07497 Rho termination factor, RNA-binding domain KAB04_03250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB04_03252 PF00216 Bacterial DNA-binding protein KAB04_03253 PF01588 Putative tRNA binding domain KAB04_03253 PF03484 tRNA synthetase B5 domain KAB04_03253 PF03483 B3/4 domain KAB04_03253 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAB04_03253 PF03147 Ferredoxin-fold anticodon binding domain KAB04_03254 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAB04_03254 PF01409 tRNA synthetases class II core domain (F) KAB04_03258 PF00453 Ribosomal protein L20 KAB04_03259 PF01632 Ribosomal protein L35 KAB04_03260 PF07690 Major Facilitator Superfamily KAB04_03261 PF09335 SNARE associated Golgi protein KAB04_03262 PF00043 Glutathione S-transferase, C-terminal domain KAB04_03262 PF02798 Glutathione S-transferase, N-terminal domain KAB04_03263 PF00707 Translation initiation factor IF-3, C-terminal domain KAB04_03263 PF05198 Translation initiation factor IF-3, N-terminal domain KAB04_03264 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB04_03264 PF03129 Anticodon binding domain KAB04_03264 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB04_03264 PF02824 TGS domain KAB04_03265 PF00501 AMP-binding enzyme KAB04_03265 PF13193 AMP-binding enzyme C-terminal domain KAB04_03266 PF04751 Protein of unknown function (DUF615) KAB04_03267 PF00381 PTS HPr component phosphorylation site KAB04_03268 PF03668 P-loop ATPase protein family KAB04_03269 PF02569 Pantoate-beta-alanine ligase KAB04_03270 PF02548 Ketopantoate hydroxymethyltransferase KAB04_03271 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAB04_03272 PF01743 Poly A polymerase head domain KAB04_03272 PF12626 Polymerase A arginine-rich C-terminus KAB04_03272 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB04_03274 PF03819 MazG nucleotide pyrophosphohydrolase domain KAB04_03276 PF04607 Region found in RelA / SpoT proteins KAB04_03276 PF02824 TGS domain KAB04_03276 PF13291 ACT domain KAB04_03277 PF05958 tRNA (Uracil-5-)-methyltransferase KAB04_03279 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_03280 PF01627 Hpt domain KAB04_03280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAB04_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_03280 PF00512 His Kinase A (phospho-acceptor) domain KAB04_03280 PF00672 HAMP domain KAB04_03280 PF00072 Response regulator receiver domain KAB04_03281 PF00378 Enoyl-CoA hydratase/isomerase KAB04_03282 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB04_03282 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB04_03283 PF01261 Xylose isomerase-like TIM barrel KAB04_03285 PF00106 short chain dehydrogenase KAB04_03286 PF02233 NAD(P) transhydrogenase beta subunit KAB04_03287 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KAB04_03288 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAB04_03288 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAB04_03289 PF00892 EamA-like transporter family KAB04_03291 PF07690 Major Facilitator Superfamily KAB04_03292 PF01207 Dihydrouridine synthase (Dus) KAB04_03294 PF03466 LysR substrate binding domain KAB04_03294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03295 PF00899 ThiF family KAB04_03297 PF00694 Aconitase C-terminal domain KAB04_03297 PF00330 Aconitase family (aconitate hydratase) KAB04_03298 PF01026 TatD related DNase KAB04_03301 PF00009 Elongation factor Tu GTP binding domain KAB04_03301 PF03144 Elongation factor Tu domain 2 KAB04_03301 PF16658 Class II release factor RF3, C-terminal domain KAB04_03303 PF13737 Transposase DDE domain KAB04_03306 PF03707 Bacterial signalling protein N terminal repeat KAB04_03306 PF00563 EAL domain KAB04_03306 PF00990 Diguanylate cyclase, GGDEF domain KAB04_03307 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAB04_03307 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAB04_03308 PF10369 Small subunit of acetolactate synthase KAB04_03309 PF00205 Thiamine pyrophosphate enzyme, central domain KAB04_03309 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB04_03309 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB04_03311 PF00133 tRNA synthetases class I (I, L, M and V) KAB04_03311 PF09334 tRNA synthetases class I (M) KAB04_03311 PF08264 Anticodon-binding domain of tRNA KAB04_03311 PF13603 Leucyl-tRNA synthetase, Domain 2 KAB04_03314 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB04_03315 PF02687 FtsX-like permease family KAB04_03315 PF12704 MacB-like periplasmic core domain KAB04_03315 PF00005 ABC transporter KAB04_03316 PF02321 Outer membrane efflux protein KAB04_03319 PF00929 Exonuclease KAB04_03320 PF03193 RsgA GTPase KAB04_03322 PF00462 Glutaredoxin KAB04_03323 PF02556 Preprotein translocase subunit SecB KAB04_03326 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_03326 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_03329 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_03329 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_03331 PF04820 Tryptophan halogenase KAB04_03335 PF00221 Aromatic amino acid lyase KAB04_03338 PF13193 AMP-binding enzyme C-terminal domain KAB04_03338 PF00501 AMP-binding enzyme KAB04_03340 PF00550 Phosphopantetheine attachment site KAB04_03341 PF00550 Phosphopantetheine attachment site KAB04_03344 PF01926 50S ribosome-binding GTPase KAB04_03344 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAB04_03345 PF13360 PQQ-like domain KAB04_03347 PF13393 Histidyl-tRNA synthetase KAB04_03347 PF03129 Anticodon binding domain KAB04_03348 PF04551 GcpE protein KAB04_03349 PF13464 Domain of unknown function (DUF4115) KAB04_03351 PF04055 Radical SAM superfamily KAB04_03352 PF00334 Nucleoside diphosphate kinase KAB04_03353 PF04384 Iron-sulphur cluster assembly KAB04_03354 PF01569 PAP2 superfamily KAB04_03355 PF00534 Glycosyl transferases group 1 KAB04_03355 PF13439 Glycosyltransferase Family 4 KAB04_03356 PF17804 Tail specific protease N-terminal domain KAB04_03356 PF00595 PDZ domain KAB04_03356 PF03572 Peptidase family S41 KAB04_03356 PF11818 C-terminal domain of tail specific protease (DUF3340) KAB04_03357 PF00933 Glycosyl hydrolase family 3 N terminal domain KAB04_03359 PF00561 alpha/beta hydrolase fold KAB04_03360 PF00171 Aldehyde dehydrogenase family KAB04_03361 PF00171 Aldehyde dehydrogenase family KAB04_03362 PF01202 Shikimate kinase KAB04_03363 PF02447 GntP family permease KAB04_03364 PF01081 KDPG and KHG aldolase KAB04_03365 PF00920 Dehydratase family KAB04_03366 PF00871 Acetokinase family KAB04_03367 PF01515 Phosphate acetyl/butaryl transferase KAB04_03367 PF07085 DRTGG domain KAB04_03368 PF05681 Fumarate hydratase (Fumerase) KAB04_03368 PF05683 Fumarase C-terminus KAB04_03371 PF06689 ClpX C4-type zinc finger KAB04_03371 PF10431 C-terminal, D2-small domain, of ClpB protein KAB04_03371 PF07724 AAA domain (Cdc48 subfamily) KAB04_03372 PF00574 Clp protease KAB04_03373 PF05697 Bacterial trigger factor protein (TF) KAB04_03373 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB04_03373 PF05698 Bacterial trigger factor protein (TF) C-terminus KAB04_03374 PF00593 TonB dependent receptor KAB04_03374 PF07715 TonB-dependent Receptor Plug Domain KAB04_03375 PF13640 2OG-Fe(II) oxygenase superfamily KAB04_03375 PF18331 PKHD-type hydroxylase C-terminal domain KAB04_03376 PF08502 LeuA allosteric (dimerisation) domain KAB04_03376 PF00682 HMGL-like KAB04_03377 PF00561 alpha/beta hydrolase fold KAB04_03378 PF00561 alpha/beta hydrolase fold KAB04_03378 PF07021 Methionine biosynthesis protein MetW KAB04_03380 PF01725 Ham1 family KAB04_03382 PF02416 mttA/Hcf106 family KAB04_03383 PF02416 mttA/Hcf106 family KAB04_03384 PF00902 Sec-independent protein translocase protein (TatC) KAB04_03388 PF01790 Prolipoprotein diacylglyceryl transferase KAB04_03391 PF00303 Thymidylate synthase KAB04_03392 PF00186 Dihydrofolate reductase KAB04_03394 PF01625 Peptide methionine sulfoxide reductase KAB04_03396 PF01618 MotA/TolQ/ExbB proton channel family KAB04_03398 PF01842 ACT domain KAB04_03398 PF00551 Formyl transferase KAB04_03400 PF00171 Aldehyde dehydrogenase family KAB04_03401 PF00830 Ribosomal L28 family KAB04_03402 PF00471 Ribosomal protein L33 KAB04_03403 PF00999 Sodium/hydrogen exchanger family KAB04_03403 PF02254 TrkA-N domain KAB04_03407 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KAB04_03408 PF13361 UvrD-like helicase C-terminal domain KAB04_03408 PF00580 UvrD/REP helicase N-terminal domain KAB04_03411 PF08272 Topoisomerase I zinc-ribbon-like KAB04_03411 PF01396 Topoisomerase DNA binding C4 zinc finger KAB04_03411 PF01131 DNA topoisomerase KAB04_03411 PF01751 Toprim domain KAB04_03413 PF01638 HxlR-like helix-turn-helix KAB04_03414 PF08240 Alcohol dehydrogenase GroES-like domain KAB04_03414 PF00107 Zinc-binding dehydrogenase KAB04_03417 PF01810 LysE type translocator KAB04_03418 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB04_03420 PF00375 Sodium:dicarboxylate symporter family KAB04_03422 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB04_03422 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB04_03426 PF01416 tRNA pseudouridine synthase KAB04_03428 PF01176 Translation initiation factor 1A / IF-1 KAB04_03431 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB04_03433 PF00694 Aconitase C-terminal domain KAB04_03434 PF00330 Aconitase family (aconitate hydratase) KAB04_03436 PF03466 LysR substrate binding domain KAB04_03436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03440 PF00293 NUDIX domain KAB04_03441 PF00391 PEP-utilising enzyme, mobile domain KAB04_03441 PF01590 GAF domain KAB04_03441 PF05524 PEP-utilising enzyme, N-terminal KAB04_03441 PF02896 PEP-utilising enzyme, TIM barrel domain KAB04_03442 PF00141 Peroxidase KAB04_03443 PF12706 Beta-lactamase superfamily domain KAB04_03444 PF03466 LysR substrate binding domain KAB04_03444 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03446 PF02798 Glutathione S-transferase, N-terminal domain KAB04_03447 PF08279 HTH domain KAB04_03447 PF13280 WYL domain KAB04_03448 PF13419 Haloacid dehalogenase-like hydrolase KAB04_03449 PF01479 S4 domain KAB04_03449 PF00849 RNA pseudouridylate synthase KAB04_03450 PF10150 Ribonuclease E/G family KAB04_03450 PF00575 S1 RNA binding domain KAB04_03450 PF12111 Polyribonucleotide phosphorylase C terminal KAB04_03451 PF00501 AMP-binding enzyme KAB04_03451 PF13193 AMP-binding enzyme C-terminal domain KAB04_03454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03454 PF03466 LysR substrate binding domain KAB04_03455 PF00106 short chain dehydrogenase KAB04_03456 PF06969 HemN C-terminal domain KAB04_03456 PF04055 Radical SAM superfamily KAB04_03458 PF01554 MatE KAB04_03459 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB04_03459 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_03459 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_03460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_03460 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB04_03461 PF03109 ABC1 family KAB04_03462 PF01197 Ribosomal protein L31 KAB04_03464 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KAB04_03468 PF03884 DNA gyrase inhibitor YacG KAB04_03469 PF00753 Metallo-beta-lactamase superfamily KAB04_03470 PF00762 Ferrochelatase KAB04_03472 PF01177 Asp/Glu/Hydantoin racemase KAB04_03475 PF01206 Sulfurtransferase TusA KAB04_03476 PF03471 Transporter associated domain KAB04_03476 PF00571 CBS domain KAB04_03477 PF00795 Carbon-nitrogen hydrolase KAB04_03478 PF01588 Putative tRNA binding domain KAB04_03479 PF13737 Transposase DDE domain KAB04_03481 PF07963 Prokaryotic N-terminal methylation motif KAB04_03481 PF08334 Type II secretion system (T2SS), protein G KAB04_03482 PF00482 Type II secretion system (T2SS), protein F KAB04_03483 PF00271 Helicase conserved C-terminal domain KAB04_03483 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAB04_03483 PF18074 Primosomal protein N C-terminal domain KAB04_03483 PF17764 3′ DNA-binding domain (3′BD) KAB04_03483 PF00270 DEAD/DEAH box helicase KAB04_03484 PF00999 Sodium/hydrogen exchanger family KAB04_03484 PF02254 TrkA-N domain KAB04_03485 PF01430 Hsp33 protein KAB04_03486 PF13737 Transposase DDE domain KAB04_03488 PF01556 DnaJ C terminal domain KAB04_03488 PF00226 DnaJ domain KAB04_03490 PF01544 CorA-like Mg2+ transporter protein KAB04_03491 PF00575 S1 RNA binding domain KAB04_03491 PF00013 KH domain KAB04_03491 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAB04_03491 PF01138 3' exoribonuclease family, domain 1 KAB04_03491 PF03725 3' exoribonuclease family, domain 2 KAB04_03492 PF00312 Ribosomal protein S15 KAB04_03494 PF13538 UvrD-like helicase C-terminal domain KAB04_03495 PF12705 PD-(D/E)XK nuclease superfamily KAB04_03495 PF00580 UvrD/REP helicase N-terminal domain KAB04_03495 PF13361 UvrD-like helicase C-terminal domain KAB04_03496 PF17946 RecC C-terminal domain KAB04_03498 PF03976 Polyphosphate kinase 2 (PPK2) KAB04_03500 PF01209 ubiE/COQ5 methyltransferase family KAB04_03502 PF03109 ABC1 family KAB04_03503 PF01494 FAD binding domain KAB04_03504 PF01502 Phosphoribosyl-AMP cyclohydrolase KAB04_03507 PF13244 Domain of unknown function (DUF4040) KAB04_03507 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KAB04_03507 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB04_03507 PF00361 Proton-conducting membrane transporter KAB04_03508 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB04_03509 PF00361 Proton-conducting membrane transporter KAB04_03511 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KAB04_03513 PF02033 Ribosome-binding factor A KAB04_03514 PF11987 Translation-initiation factor 2 KAB04_03514 PF08364 Bacterial translation initiation factor IF-2 associated region KAB04_03514 PF00009 Elongation factor Tu GTP binding domain KAB04_03514 PF04760 Translation initiation factor IF-2, N-terminal region KAB04_03515 PF00575 S1 RNA binding domain KAB04_03515 PF13184 NusA-like KH domain KAB04_03515 PF08529 NusA N-terminal domain KAB04_03516 PF02576 RimP N-terminal domain KAB04_03516 PF17384 RimP C-terminal SH3 domain KAB04_03520 PF03840 Preprotein translocase SecG subunit KAB04_03521 PF00121 Triosephosphate isomerase KAB04_03522 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAB04_03522 PF00437 Type II/IV secretion system protein KAB04_03523 PF00482 Type II secretion system (T2SS), protein F KAB04_03524 PF01478 Type IV leader peptidase family KAB04_03524 PF06750 Bacterial Peptidase A24 N-terminal domain KAB04_03525 PF01121 Dephospho-CoA kinase KAB04_03527 PF00588 SpoU rRNA Methylase family KAB04_03527 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB04_03528 PF06865 Pyrimidine/purine nucleoside phosphorylase KAB04_03530 PF02463 RecF/RecN/SMC N terminal domain KAB04_03531 PF02622 Uncharacterized ACR, COG1678 KAB04_03532 PF03652 Holliday junction resolvase KAB04_03533 PF13533 Biotin-lipoyl like KAB04_03538 PF12833 Helix-turn-helix domain KAB04_03538 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB04_03538 PF02805 Metal binding domain of Ada KAB04_03538 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB04_03539 PF01066 CDP-alcohol phosphatidyltransferase KAB04_03541 PF02151 UvrB/uvrC motif KAB04_03541 PF08459 UvrC Helix-hairpin-helix N-terminal KAB04_03541 PF01541 GIY-YIG catalytic domain KAB04_03546 PF13737 Transposase DDE domain KAB04_03548 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB04_03548 PF00378 Enoyl-CoA hydratase/isomerase KAB04_03548 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB04_03549 PF02803 Thiolase, C-terminal domain KAB04_03549 PF00108 Thiolase, N-terminal domain KAB04_03553 PF09278 MerR, DNA binding KAB04_03553 PF00376 MerR family regulatory protein KAB04_03555 PF01323 DSBA-like thioredoxin domain KAB04_03558 PF00183 Hsp90 protein KAB04_03558 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_03561 PF03553 Na+/H+ antiporter family KAB04_03561 PF13726 Na+-H+ antiporter family KAB04_03562 PF00561 alpha/beta hydrolase fold KAB04_03566 PF04983 RNA polymerase Rpb1, domain 3 KAB04_03566 PF04998 RNA polymerase Rpb1, domain 5 KAB04_03566 PF04997 RNA polymerase Rpb1, domain 1 KAB04_03566 PF05000 RNA polymerase Rpb1, domain 4 KAB04_03566 PF00623 RNA polymerase Rpb1, domain 2 KAB04_03567 PF04560 RNA polymerase Rpb2, domain 7 KAB04_03567 PF04561 RNA polymerase Rpb2, domain 2 KAB04_03567 PF04565 RNA polymerase Rpb2, domain 3 KAB04_03567 PF10385 RNA polymerase beta subunit external 1 domain KAB04_03567 PF00562 RNA polymerase Rpb2, domain 6 KAB04_03567 PF04563 RNA polymerase beta subunit KAB04_03568 PF00542 Ribosomal protein L7/L12 C-terminal domain KAB04_03568 PF16320 Ribosomal protein L7/L12 dimerisation domain KAB04_03569 PF00466 Ribosomal protein L10 KAB04_03570 PF00687 Ribosomal protein L1p/L10e family KAB04_03571 PF00298 Ribosomal protein L11, RNA binding domain KAB04_03571 PF03946 Ribosomal protein L11, N-terminal domain KAB04_03572 PF02357 Transcription termination factor nusG KAB04_03572 PF00467 KOW motif KAB04_03573 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAB04_03575 PF03144 Elongation factor Tu domain 2 KAB04_03575 PF03143 Elongation factor Tu C-terminal domain KAB04_03575 PF00009 Elongation factor Tu GTP binding domain KAB04_03580 PF04715 Anthranilate synthase component I, N terminal region KAB04_03580 PF00425 chorismate binding enzyme KAB04_03581 PF13419 Haloacid dehalogenase-like hydrolase KAB04_03582 PF12401 Protein of unknown function (DUF2662) KAB04_03582 PF00498 FHA domain KAB04_03583 PF00263 Bacterial type II and III secretion system protein KAB04_03583 PF03958 Bacterial type II/III secretion system short domain KAB04_03586 PF00816 H-NS histone family KAB04_03591 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAB04_03591 PF03900 Porphobilinogen deaminase, C-terminal domain KAB04_03592 PF00072 Response regulator receiver domain KAB04_03592 PF04397 LytTr DNA-binding domain KAB04_03593 PF07694 5TMR of 5TMR-LYT KAB04_03593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_03593 PF06580 Histidine kinase KAB04_03594 PF14698 Argininosuccinate lyase C-terminal KAB04_03594 PF00206 Lyase KAB04_03595 PF04362 Bacterial Fe(2+) trafficking KAB04_03596 PF01895 PhoU domain KAB04_03597 PF02321 Outer membrane efflux protein KAB04_03598 PF00892 EamA-like transporter family KAB04_03601 PF01964 Radical SAM ThiC family KAB04_03601 PF13667 ThiC-associated domain KAB04_03602 PF00293 NUDIX domain KAB04_03603 PF00149 Calcineurin-like phosphoesterase KAB04_03604 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAB04_03605 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB04_03606 PF01098 Cell cycle protein KAB04_03607 PF08245 Mur ligase middle domain KAB04_03607 PF02875 Mur ligase family, glutamate ligase domain KAB04_03609 PF07664 Ferrous iron transport protein B C terminus KAB04_03609 PF07670 Nucleoside recognition KAB04_03609 PF02421 Ferrous iron transport protein B KAB04_03611 PF02899 Phage integrase, N-terminal SAM-like domain KAB04_03611 PF00589 Phage integrase family KAB04_03612 PF10411 Disulfide bond isomerase protein N-terminus KAB04_03612 PF13098 Thioredoxin-like domain KAB04_03613 PF03447 Homoserine dehydrogenase, NAD binding domain KAB04_03613 PF00742 Homoserine dehydrogenase KAB04_03613 PF01842 ACT domain KAB04_03614 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_03615 PF00768 D-alanyl-D-alanine carboxypeptidase KAB04_03616 PF00196 Bacterial regulatory proteins, luxR family KAB04_03616 PF00072 Response regulator receiver domain KAB04_03617 PF00512 His Kinase A (phospho-acceptor) domain KAB04_03617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB04_03618 PF02954 Bacterial regulatory protein, Fis family KAB04_03618 PF00158 Sigma-54 interaction domain KAB04_03618 PF00072 Response regulator receiver domain KAB04_03619 PF03572 Peptidase family S41 KAB04_03619 PF00595 PDZ domain KAB04_03620 PF01676 Metalloenzyme superfamily KAB04_03620 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KAB04_03621 PF03739 Lipopolysaccharide export system permease LptF/LptG KAB04_03623 PF02789 Cytosol aminopeptidase family, N-terminal domain KAB04_03623 PF00883 Cytosol aminopeptidase family, catalytic domain KAB04_03627 PF00677 Lumazine binding domain KAB04_03629 PF01872 RibD C-terminal domain KAB04_03629 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB04_03630 PF03477 ATP cone domain KAB04_03631 PF00909 Ammonium Transporter Family KAB04_03632 PF00543 Nitrogen regulatory protein P-II KAB04_03634 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB04_03634 PF01078 Magnesium chelatase, subunit ChlI KAB04_03636 PF00916 Sulfate permease family KAB04_03636 PF01740 STAS domain KAB04_03637 PF00582 Universal stress protein family KAB04_03641 PF00665 Integrase core domain KAB04_03643 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB04_03643 PF01078 Magnesium chelatase, subunit ChlI KAB04_03644 PF00392 Bacterial regulatory proteins, gntR family KAB04_03644 PF00155 Aminotransferase class I and II KAB04_03646 PF00701 Dihydrodipicolinate synthetase family KAB04_03649 PF03573 outer membrane porin, OprD family KAB04_03650 PF00719 Inorganic pyrophosphatase KAB04_03653 PF00501 AMP-binding enzyme KAB04_03653 PF13193 AMP-binding enzyme C-terminal domain KAB04_03654 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB04_03654 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB04_03655 PF07690 Major Facilitator Superfamily KAB04_03656 PF03458 UPF0126 domain KAB04_03657 PF02810 SEC-C motif KAB04_03658 PF03471 Transporter associated domain KAB04_03658 PF03741 Integral membrane protein TerC family KAB04_03659 PF03641 Possible lysine decarboxylase KAB04_03660 PF07690 Major Facilitator Superfamily KAB04_03662 PF11798 IMS family HHH motif KAB04_03662 PF00817 impB/mucB/samB family KAB04_03662 PF11799 impB/mucB/samB family C-terminal domain KAB04_03665 PF04055 Radical SAM superfamily KAB04_03665 PF08497 Radical SAM N-terminal KAB04_03665 PF11842 Domain of unknown function (DUF3362) KAB04_03669 PF03358 NADPH-dependent FMN reductase KAB04_03671 PF00291 Pyridoxal-phosphate dependent enzyme KAB04_03678 PF00440 Bacterial regulatory proteins, tetR family KAB04_03683 PF01327 Polypeptide deformylase KAB04_03685 PF02481 DNA recombination-mediator protein A KAB04_03685 PF17782 DprA winged helix domain KAB04_03686 PF01300 Telomere recombination KAB04_03687 PF00892 EamA-like transporter family KAB04_03688 PF00440 Bacterial regulatory proteins, tetR family KAB04_03689 PF07690 Major Facilitator Superfamily KAB04_03691 PF00255 Glutathione peroxidase KAB04_03693 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KAB04_03694 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB04_03694 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB04_03695 PF00231 ATP synthase KAB04_03696 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB04_03696 PF00306 ATP synthase alpha/beta chain, C terminal domain KAB04_03696 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB04_03697 PF00213 ATP synthase delta (OSCP) subunit KAB04_03698 PF00430 ATP synthase B/B' CF(0) KAB04_03699 PF00137 ATP synthase subunit C KAB04_03700 PF00119 ATP synthase A chain KAB04_03704 PF00005 ABC transporter KAB04_03705 PF00950 ABC 3 transport family KAB04_03706 PF01810 LysE type translocator KAB04_03707 PF04261 Dyp-type peroxidase family KAB04_03708 PF00390 Malic enzyme, N-terminal domain KAB04_03708 PF03949 Malic enzyme, NAD binding domain KAB04_03709 PF03485 Arginyl tRNA synthetase N terminal domain KAB04_03709 PF05746 DALR anticodon binding domain KAB04_03709 PF00750 tRNA synthetases class I (R) KAB04_03713 PF05726 Pirin C-terminal cupin domain KAB04_03713 PF02678 Pirin KAB04_03715 PF03551 Transcriptional regulator PadR-like family KAB04_03716 PF13427 Domain of unknown function (DUF4111) KAB04_03716 PF01909 Nucleotidyltransferase domain KAB04_03717 PF00958 GMP synthase C terminal domain KAB04_03717 PF00117 Glutamine amidotransferase class-I KAB04_03717 PF02540 NAD synthase KAB04_03718 PF04286 Protein of unknown function (DUF445) KAB04_03719 PF07681 DoxX KAB04_03720 PF09335 SNARE associated Golgi protein KAB04_03723 PF13614 AAA domain KAB04_03725 PF01722 BolA-like protein KAB04_03728 PF01648 4'-phosphopantetheinyl transferase superfamily KAB04_03729 PF16363 GDP-mannose 4,6 dehydratase KAB04_03732 PF00501 AMP-binding enzyme KAB04_03732 PF13193 AMP-binding enzyme C-terminal domain KAB04_03732 PF00668 Condensation domain KAB04_03732 PF00550 Phosphopantetheine attachment site KAB04_03732 PF00975 Thioesterase domain KAB04_03733 PF00550 Phosphopantetheine attachment site KAB04_03733 PF08242 Methyltransferase domain KAB04_03733 PF14765 Polyketide synthase dehydratase KAB04_03733 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_03733 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_03733 PF16197 Ketoacyl-synthetase C-terminal extension KAB04_03733 PF00975 Thioesterase domain KAB04_03734 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_03734 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_03734 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_03735 PF00501 AMP-binding enzyme KAB04_03736 PF13737 Transposase DDE domain KAB04_03737 PF00196 Bacterial regulatory proteins, luxR family KAB04_03737 PF03472 Autoinducer binding domain KAB04_03739 PF00765 Autoinducer synthase KAB04_03740 PF00083 Sugar (and other) transporter KAB04_03740 PF07690 Major Facilitator Superfamily KAB04_03741 PF00378 Enoyl-CoA hydratase/isomerase KAB04_03742 PF00378 Enoyl-CoA hydratase/isomerase KAB04_03743 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB04_03743 PF02770 Acyl-CoA dehydrogenase, middle domain KAB04_03743 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB04_03744 PF00501 AMP-binding enzyme KAB04_03744 PF13193 AMP-binding enzyme C-terminal domain KAB04_03745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB04_03745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB04_03746 PF00171 Aldehyde dehydrogenase family KAB04_03748 PF00324 Amino acid permease KAB04_03749 PF00324 Amino acid permease KAB04_03750 PF01042 Endoribonuclease L-PSP KAB04_03751 PF00842 Alanine racemase, C-terminal domain KAB04_03751 PF01168 Alanine racemase, N-terminal domain KAB04_03752 PF01266 FAD dependent oxidoreductase KAB04_03753 PF01037 Lrp/AsnC ligand binding domain KAB04_03755 PF07715 TonB-dependent Receptor Plug Domain KAB04_03755 PF00593 TonB dependent receptor KAB04_03758 PF00849 RNA pseudouridylate synthase KAB04_03764 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB04_03764 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB04_03765 PF13737 Transposase DDE domain KAB04_03772 PF00694 Aconitase C-terminal domain KAB04_03772 PF00330 Aconitase family (aconitate hydratase) KAB04_03773 PF00285 Citrate synthase, C-terminal domain KAB04_03775 PF07729 FCD domain KAB04_03775 PF00392 Bacterial regulatory proteins, gntR family KAB04_03776 PF00155 Aminotransferase class I and II KAB04_03777 PF09330 D-lactate dehydrogenase, membrane binding KAB04_03777 PF01565 FAD binding domain KAB04_03778 PF01070 FMN-dependent dehydrogenase KAB04_03779 PF00392 Bacterial regulatory proteins, gntR family KAB04_03779 PF07729 FCD domain KAB04_03780 PF02652 L-lactate permease KAB04_03781 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB04_03781 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB04_03781 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB04_03781 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB04_03782 PF16363 GDP-mannose 4,6 dehydratase KAB04_03783 PF00342 Phosphoglucose isomerase KAB04_03784 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB04_03784 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB04_03784 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB04_03785 PF00483 Nucleotidyl transferase KAB04_03786 PF02397 Bacterial sugar transferase KAB04_03787 PF00953 Glycosyl transferase family 4 KAB04_03788 PF01370 NAD dependent epimerase/dehydratase family KAB04_03789 PF13579 Glycosyl transferase 4-like domain KAB04_03790 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB04_03791 PF01370 NAD dependent epimerase/dehydratase family KAB04_03792 PF02719 Polysaccharide biosynthesis protein KAB04_03792 PF08485 Polysaccharide biosynthesis protein C-terminal KAB04_03796 PF00132 Bacterial transferase hexapeptide (six repeats) KAB04_03798 PF01370 NAD dependent epimerase/dehydratase family KAB04_03799 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB04_03799 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB04_03799 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB04_03800 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KAB04_03800 PF10531 SLBB domain KAB04_03800 PF02563 Polysaccharide biosynthesis/export protein KAB04_03801 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB04_03802 PF13614 AAA domain KAB04_03802 PF13807 G-rich domain on putative tyrosine kinase KAB04_03802 PF02706 Chain length determinant protein KAB04_03803 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB04_03803 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB04_03804 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB04_03804 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB04_03805 PF03023 Lipid II flippase MurJ KAB04_03806 PF01510 N-acetylmuramoyl-L-alanine amidase KAB04_03807 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KAB04_03807 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KAB04_03809 PF04185 Phosphoesterase family KAB04_03809 PF05506 Domain of unknown function (DUF756) KAB04_03810 PF04185 Phosphoesterase family KAB04_03810 PF05506 Domain of unknown function (DUF756) KAB04_03811 PF03725 3' exoribonuclease family, domain 2 KAB04_03811 PF01138 3' exoribonuclease family, domain 1 KAB04_03812 PF00487 Fatty acid desaturase KAB04_03813 PF00175 Oxidoreductase NAD-binding domain KAB04_03814 PF00440 Bacterial regulatory proteins, tetR family KAB04_03815 PF08360 QacR-like protein, C-terminal region KAB04_03815 PF00440 Bacterial regulatory proteins, tetR family KAB04_03816 PF01323 DSBA-like thioredoxin domain KAB04_03818 PF13419 Haloacid dehalogenase-like hydrolase KAB04_03819 PF00106 short chain dehydrogenase KAB04_03822 PF00583 Acetyltransferase (GNAT) family KAB04_03822 PF00696 Amino acid kinase family KAB04_03823 PF09084 NMT1/THI5 like KAB04_03824 PF09084 NMT1/THI5 like KAB04_03825 PF00296 Luciferase-like monooxygenase KAB04_03826 PF00528 Binding-protein-dependent transport system inner membrane component KAB04_03827 PF00005 ABC transporter KAB04_03828 PF00440 Bacterial regulatory proteins, tetR family KAB04_03828 PF08362 YcdC-like protein, C-terminal region KAB04_03829 PF01048 Phosphorylase superfamily KAB04_03831 PF01687 Riboflavin kinase KAB04_03831 PF06574 FAD synthetase KAB04_03832 PF06827 Zinc finger found in FPG and IleRS KAB04_03832 PF00133 tRNA synthetases class I (I, L, M and V) KAB04_03832 PF08264 Anticodon-binding domain of tRNA KAB04_03833 PF01252 Signal peptidase (SPase) II KAB04_03834 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB04_03841 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB04_03842 PF07859 alpha/beta hydrolase fold KAB04_03846 PF03466 LysR substrate binding domain KAB04_03846 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB04_03847 PF01025 GrpE KAB04_03848 PF00012 Hsp70 protein KAB04_03852 PF13406 Transglycosylase SLT domain KAB04_03853 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KAB04_03853 PF02222 ATP-grasp domain KAB04_03854 PF00731 AIR carboxylase KAB04_03856 PF08245 Mur ligase middle domain KAB04_03856 PF01225 Mur ligase family, catalytic domain KAB04_03856 PF02875 Mur ligase family, glutamate ligase domain KAB04_03858 PF01569 PAP2 superfamily KAB04_03859 PF03741 Integral membrane protein TerC family KAB04_03861 PF03738 Glutathionylspermidine synthase preATP-grasp KAB04_03862 PF00355 Rieske [2Fe-2S] domain KAB04_03863 PF01979 Amidohydrolase family KAB04_03865 PF00156 Phosphoribosyl transferase domain KAB04_03867 PF13098 Thioredoxin-like domain KAB04_03867 PF10411 Disulfide bond isomerase protein N-terminus KAB04_03868 PF01545 Cation efflux family KAB04_03868 PF16916 Dimerisation domain of Zinc Transporter KAB04_03869 PF02583 Metal-sensitive transcriptional repressor KAB04_03870 PF01926 50S ribosome-binding GTPase KAB04_03870 PF12631 MnmE helical domain KAB04_03870 PF10396 GTP-binding protein TrmE N-terminus KAB04_03871 PF14849 YidC periplasmic domain KAB04_03871 PF02096 60Kd inner membrane protein KAB04_03872 PF01809 Putative membrane protein insertion efficiency factor KAB04_03873 PF00825 Ribonuclease P KAB04_03874 PF00468 Ribosomal protein L34 KAB04_03890 PF00239 Resolvase, N terminal domain KAB04_03890 PF02796 Helix-turn-helix domain of resolvase KAB04_03893 PF01464 Transglycosylase SLT domain KAB04_03900 PF10411 Disulfide bond isomerase protein N-terminus KAB04_03900 PF13098 Thioredoxin-like domain KAB04_03907 PF06834 TraU protein KAB04_03909 PF06986 Type-1V conjugative transfer system mating pair stabilisation KAB04_03912 PF06122 Conjugative relaxosome accessory transposon protein KAB04_03916 PF00817 impB/mucB/samB family KAB04_03916 PF13438 Domain of unknown function (DUF4113) KAB04_03916 PF11799 impB/mucB/samB family C-terminal domain KAB04_03930 PF00565 Staphylococcal nuclease homologue KAB04_03932 PF00816 H-NS histone family KAB04_03939 PF00271 Helicase conserved C-terminal domain KAB04_03939 PF00176 SNF2 family N-terminal domain KAB04_03946 PF06527 TniQ KAB04_03946 PF15978 Tn7-like transposition protein D KAB04_03947 PF13401 AAA domain KAB04_03947 PF11426 Tn7 transposition regulator TnsC KAB04_03948 PF00665 Integrase core domain KAB04_03949 PF13737 Transposase DDE domain KAB04_03951 PF08721 TnsA endonuclease C terminal KAB04_03951 PF08722 TnsA endonuclease N terminal KAB04_03955 PF13614 AAA domain KAB04_03956 PF02195 ParB-like nuclease domain KAB04_03956 PF17762 HTH domain found in ParB protein KAB04_03960 PF05816 Toxic anion resistance protein (TelA) KAB04_03962 PF13737 Transposase DDE domain KAB04_03973 PF13737 Transposase DDE domain KAB04_03984 PF01695 IstB-like ATP binding protein KAB04_03985 PF08281 Sigma-70, region 4 KAB04_03985 PF00665 Integrase core domain KAB04_03991 PF13737 Transposase DDE domain KAB04_03993 PF00005 ABC transporter KAB04_03993 PF03412 Peptidase C39 family KAB04_03993 PF00664 ABC transporter transmembrane region KAB04_03995 PF00684 DnaJ central domain KAB04_03995 PF01556 DnaJ C terminal domain KAB04_03995 PF00226 DnaJ domain KAB04_04002 PF07057 DNA helicase TraI KAB04_04002 PF18340 DNA relaxase TraI 2B/2B-like domain KAB04_04002 PF18272 single-stranded DNA binding TraI N-terminal subdomain KAB04_04002 PF08751 TrwC relaxase KAB04_04011 PF00239 Resolvase, N terminal domain KAB04_04011 PF02796 Helix-turn-helix domain of resolvase KAB04_04014 PF01464 Transglycosylase SLT domain