KAB04_00001 SM00382 ATPases associated with a variety of cellular activities KAB04_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain KAB04_00002 SM00480 DNA polymerase III beta subunit KAB04_00004 SM00387 Histidine kinase-like ATPases KAB04_00004 SM00433 TopoisomeraseII KAB04_00007 SM00382 ATPases associated with a variety of cellular activities KAB04_00038 SM00271 DnaJ molecular chaperone homology domain KAB04_00046 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_00047 SM00829 Enoylreductase KAB04_00051 SM00478 endonuclease III KAB04_00051 SM00525 KAB04_00051 KAB04_00057 SM00382 ATPases associated with a variety of cellular activities KAB04_00062 SM01130 KAB04_00062 KAB04_00068 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_00074 SM00833 Cobalamin synthesis protein cobW C-terminal domain KAB04_00076 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_00076 SM00866 KAB04_00076 KAB04_00099 SM00450 Rhodanese Homology Domain KAB04_00105 SM00387 Histidine kinase-like ATPases KAB04_00105 SM00388 His Kinase A (phosphoacceptor) domain KAB04_00106 SM00448 cheY-homologous receiver domain KAB04_00106 SM00862 Transcriptional regulatory protein, C terminal KAB04_00117 SM00257 Lysin motif KAB04_00121 SM00387 Histidine kinase-like ATPases KAB04_00121 SM00433 TopoisomeraseII KAB04_00135 SM00267 diguanylate cyclase KAB04_00148 SM00842 Cell division protein FtsA KAB04_00149 SM00864 Tubulin/FtsZ family, GTPase domain KAB04_00149 SM00865 Tubulin/FtsZ family, C-terminal domain KAB04_00158 SM00849 Metallo-beta-lactamase superfamily KAB04_00160 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB04_00160 SM01240 KAB04_00160 KAB04_00165 SM00937 KAB04_00165 KAB04_00167 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KAB04_00175 SM00344 helix_turn_helix ASNC type KAB04_00179 SM00421 helix_turn_helix, Lux Regulon KAB04_00179 SM00448 cheY-homologous receiver domain KAB04_00181 SM00387 Histidine kinase-like ATPases KAB04_00181 SM00388 His Kinase A (phosphoacceptor) domain KAB04_00181 SM00448 cheY-homologous receiver domain KAB04_00187 SM00267 diguanylate cyclase KAB04_00191 SM00829 Enoylreductase KAB04_00200 SM00530 Helix-turn-helix XRE-family like proteins KAB04_00202 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_00219 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00221 SM00671 Sel1-like repeats. KAB04_00231 SM00477 DNA/RNA non-specific endonuclease KAB04_00231 SM00892 DNA/RNA non-specific endonuclease KAB04_00235 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00239 SM00357 Cold shock protein domain KAB04_00243 SM00530 Helix-turn-helix XRE-family like proteins KAB04_00245 SM00474 3'-5' exonuclease KAB04_00254 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB04_00254 SM00387 Histidine kinase-like ATPases KAB04_00254 SM00388 His Kinase A (phosphoacceptor) domain KAB04_00255 SM00448 cheY-homologous receiver domain KAB04_00255 SM00862 Transcriptional regulatory protein, C terminal KAB04_00256 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_00256 SM00732 Likely ribonuclease with RNase H fold. KAB04_00257 SM00947 Carbonic anhydrase KAB04_00260 SM00382 ATPases associated with a variety of cellular activities KAB04_00261 SM00671 Sel1-like repeats. KAB04_00291 SM00842 Cell division protein FtsA KAB04_00295 SM00965 Secretin and TonB N terminus short domain KAB04_00314 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KAB04_00314 SM00954 Region found in RelA / SpoT proteins KAB04_00315 SM01409 KAB04_00315 KAB04_00316 SM00072 Guanylate kinase homologues. KAB04_00353 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB04_00373 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB04_00381 SM00861 Transketolase, pyrimidine binding domain KAB04_00383 SM00487 DEAD-like helicases superfamily KAB04_00383 SM00490 helicase superfamily c-terminal domain KAB04_00384 SM00382 ATPases associated with a variety of cellular activities KAB04_00393 SM00487 DEAD-like helicases superfamily KAB04_00393 SM00490 helicase superfamily c-terminal domain KAB04_00396 SM00563 Phosphate acyltransferases KAB04_00406 SM01403 KAB04_00406 KAB04_00410 SM01382 KAB04_00410 KAB04_00410 SM01383 KAB04_00410 KAB04_00413 SM00322 K homology RNA-binding domain KAB04_00417 SM01374 KAB04_00417 KAB04_00418 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KAB04_00431 SM00363 S4 RNA-binding domain KAB04_00431 SM01390 KAB04_00431 KAB04_00432 SM00662 RNA polymerases D KAB04_00445 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_00445 SM00955 KAB04_00445 KAB04_00455 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00465 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_00471 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. KAB04_00489 SM00878 Biotin carboxylase C-terminal domain KAB04_00496 SM00650 Ribosomal RNA adenine dimethylases KAB04_00502 SM00563 Phosphate acyltransferases KAB04_00503 SM00155 Phospholipase D. Active site motifs. KAB04_00506 SM00267 diguanylate cyclase KAB04_00521 SM00450 Rhodanese Homology Domain KAB04_00526 SM00481 DNA polymerase alpha chain like domain KAB04_00532 SM01323 KAB04_00532 KAB04_00538 SM00387 Histidine kinase-like ATPases KAB04_00538 SM00388 His Kinase A (phosphoacceptor) domain KAB04_00563 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB04_00563 SM00387 Histidine kinase-like ATPases KAB04_00563 SM00388 His Kinase A (phosphoacceptor) domain KAB04_00564 SM00448 cheY-homologous receiver domain KAB04_00564 SM00862 Transcriptional regulatory protein, C terminal KAB04_00576 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00582 SM00849 Metallo-beta-lactamase superfamily KAB04_00584 SM00957 SecA DEAD-like domain KAB04_00584 SM00958 SecA preprotein cross-linking domain KAB04_00595 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00598 SM00564 beta-propeller repeat KAB04_00611 SM00838 Elongation factor G C-terminus KAB04_00615 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB04_00615 SM01232 KAB04_00615 KAB04_00623 SM00671 Sel1-like repeats. KAB04_00634 SM00448 cheY-homologous receiver domain KAB04_00635 SM00448 cheY-homologous receiver domain KAB04_00636 SM00260 Two component signalling adaptor domain KAB04_00637 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KAB04_00638 SM00073 Histidine Phosphotransfer domain KAB04_00638 SM00387 Histidine kinase-like ATPases KAB04_00638 SM01231 KAB04_00638 KAB04_00639 SM00260 Two component signalling adaptor domain KAB04_00639 SM00448 cheY-homologous receiver domain KAB04_00668 SM00845 GatB domain KAB04_00675 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_00682 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00686 SM00342 helix_turn_helix, arabinose operon control protein KAB04_00687 SM00829 Enoylreductase KAB04_00694 SM00244 prohibitin homologues KAB04_00697 SM00563 Phosphate acyltransferases KAB04_00701 SM00448 cheY-homologous receiver domain KAB04_00701 SM00862 Transcriptional regulatory protein, C terminal KAB04_00702 SM00387 Histidine kinase-like ATPases KAB04_00702 SM00388 His Kinase A (phosphoacceptor) domain KAB04_00711 SM00822 KAB04_00711 KAB04_00718 SM00014 Acid phosphatase homologues KAB04_00744 SM00014 Acid phosphatase homologues KAB04_00765 SM00450 Rhodanese Homology Domain KAB04_00772 SM00861 Transketolase, pyrimidine binding domain KAB04_00776 SM00881 CoA binding domain KAB04_00784 SM00854 Bacterial capsule synthesis protein PGA_cap KAB04_00790 SM00851 MGS-like domain KAB04_00790 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB04_00791 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KAB04_00794 SM01103 KAB04_00794 KAB04_00796 SM00382 ATPases associated with a variety of cellular activities KAB04_00811 SM00046 Diacylglycerol kinase catalytic domain (presumed) KAB04_00815 SM00883 Chaperonin 10 Kd subunit KAB04_00818 SM00849 Metallo-beta-lactamase superfamily KAB04_00841 SM00411 bacterial (prokaryotic) histone like domain KAB04_00853 SM00530 Helix-turn-helix XRE-family like proteins KAB04_00896 SM00978 KAB04_00896 KAB04_00897 SM00382 ATPases associated with a variety of cellular activities KAB04_00904 SM00893 Electron transfer flavoprotein domain KAB04_00905 SM00893 Electron transfer flavoprotein domain KAB04_00906 SM00434 DNA Topoisomerase IV KAB04_00921 SM00382 ATPases associated with a variety of cellular activities KAB04_00922 SM00849 Metallo-beta-lactamase superfamily KAB04_00950 SM00382 ATPases associated with a variety of cellular activities KAB04_00951 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB04_00952 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KAB04_00953 SM01211 KAB04_00953 KAB04_00968 SM00382 ATPases associated with a variety of cellular activities KAB04_00978 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB04_00980 SM00838 Elongation factor G C-terminus KAB04_00983 SM00358 Double-stranded RNA binding motif KAB04_00983 SM00535 Ribonuclease III family KAB04_00996 SM00267 diguanylate cyclase KAB04_00998 SM00487 DEAD-like helicases superfamily KAB04_00998 SM00490 helicase superfamily c-terminal domain KAB04_01003 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB04_01007 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KAB04_01027 SM01329 KAB04_01027 KAB04_01037 SM00880 KAB04_01037 KAB04_01037 SM01118 KAB04_01037 KAB04_01043 SM00487 DEAD-like helicases superfamily KAB04_01043 SM00490 helicase superfamily c-terminal domain KAB04_01054 SM00344 helix_turn_helix ASNC type KAB04_01060 SM00382 ATPases associated with a variety of cellular activities KAB04_01069 SM00936 Penicillin-binding protein 5, C-terminal domain KAB04_01073 SM00257 Lysin motif KAB04_01080 SM00052 Putative diguanylate phosphodiesterase KAB04_01083 SM00841 Elongation factor P, C-terminal KAB04_01083 SM01185 KAB04_01083 KAB04_01111 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KAB04_01112 SM00829 Enoylreductase KAB04_01127 SM00382 ATPases associated with a variety of cellular activities KAB04_01136 SM00382 ATPases associated with a variety of cellular activities KAB04_01137 SM00382 ATPases associated with a variety of cellular activities KAB04_01150 SM01092 CO dehydrogenase flavoprotein C-terminal domain KAB04_01151 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB04_01153 SM00463 Small MutS-related domain KAB04_01169 SM00530 Helix-turn-helix XRE-family like proteins KAB04_01172 SM00530 Helix-turn-helix XRE-family like proteins KAB04_01179 SM00382 ATPases associated with a variety of cellular activities KAB04_01218 SM01252 KAB04_01218 KAB04_01232 SM01230 KAB04_01232 KAB04_01243 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB04_01245 SM00919 Malic enzyme, NAD binding domain KAB04_01245 SM01274 KAB04_01245 KAB04_01246 SM00052 Putative diguanylate phosphodiesterase KAB04_01246 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KAB04_01246 SM00091 PAS domain KAB04_01246 SM00267 diguanylate cyclase KAB04_01249 SM00996 S-adenosyl-L-homocysteine hydrolase KAB04_01249 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB04_01253 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_01265 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01275 SM00382 ATPases associated with a variety of cellular activities KAB04_01278 SM00479 KAB04_01278 KAB04_01287 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_01290 SM00382 ATPases associated with a variety of cellular activities KAB04_01294 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_01299 SM00382 ATPases associated with a variety of cellular activities KAB04_01301 SM00448 cheY-homologous receiver domain KAB04_01301 SM00862 Transcriptional regulatory protein, C terminal KAB04_01302 SM00387 Histidine kinase-like ATPases KAB04_01302 SM00388 His Kinase A (phosphoacceptor) domain KAB04_01313 SM00830 Chorismate mutase type II KAB04_01326 SM00357 Cold shock protein domain KAB04_01327 SM00487 DEAD-like helicases superfamily KAB04_01327 SM00490 helicase superfamily c-terminal domain KAB04_01331 SM00855 Phosphoglycerate mutase family KAB04_01347 SM00220 Serine/Threonine protein kinases, catalytic domain KAB04_01363 SM01034 Sensors of blue-light using FAD KAB04_01366 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01370 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_01370 SM00895 KAB04_01370 KAB04_01375 SM00972 Spore Coat Protein U domain KAB04_01380 SM00972 Spore Coat Protein U domain KAB04_01408 SM00382 ATPases associated with a variety of cellular activities KAB04_01420 SM00849 Metallo-beta-lactamase superfamily KAB04_01422 SM00382 ATPases associated with a variety of cellular activities KAB04_01422 SM00930 KAB04_01422 KAB04_01424 SM01209 KAB04_01424 KAB04_01424 SM01210 KAB04_01424 KAB04_01425 SM00798 AICARFT/IMPCHase bienzyme KAB04_01425 SM00851 MGS-like domain KAB04_01430 SM01228 KAB04_01430 KAB04_01434 SM00460 Transglutaminase/protease-like homologues KAB04_01436 SM01005 Alanine racemase, C-terminal domain KAB04_01459 SM00937 KAB04_01459 KAB04_01462 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_01463 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01464 SM00822 KAB04_01464 KAB04_01467 SM00903 Flavin reductase like domain KAB04_01470 SM00905 Dihydroneopterin aldolase KAB04_01475 SM00387 Histidine kinase-like ATPases KAB04_01475 SM00388 His Kinase A (phosphoacceptor) domain KAB04_01476 SM00448 cheY-homologous receiver domain KAB04_01476 SM00862 Transcriptional regulatory protein, C terminal KAB04_01477 SM01230 KAB04_01477 KAB04_01493 SM00363 S4 RNA-binding domain KAB04_01498 SM00853 MutL C terminal dimerisation domain KAB04_01498 SM01340 KAB04_01498 KAB04_01512 SM00862 Transcriptional regulatory protein, C terminal KAB04_01515 SM00382 ATPases associated with a variety of cellular activities KAB04_01517 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01517 SM00871 Bacterial transcription activator, effector binding domain KAB04_01525 SM00830 Chorismate mutase type II KAB04_01526 SM00344 helix_turn_helix ASNC type KAB04_01543 SM00382 ATPases associated with a variety of cellular activities KAB04_01549 SM00831 Cation transporter/ATPase, N-terminus KAB04_01552 SM00344 helix_turn_helix ASNC type KAB04_01558 SM00822 KAB04_01558 KAB04_01563 SM00382 ATPases associated with a variety of cellular activities KAB04_01569 SM00226 Low molecular weight phosphatase family KAB04_01576 SM01236 KAB04_01576 KAB04_01644 SM00878 Biotin carboxylase C-terminal domain KAB04_01649 SM00448 cheY-homologous receiver domain KAB04_01649 SM01012 KAB04_01649 KAB04_01653 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KAB04_01655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KAB04_01656 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_01659 SM00852 Probable molybdopterin binding domain KAB04_01660 SM00852 Probable molybdopterin binding domain KAB04_01662 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_01679 SM00382 ATPases associated with a variety of cellular activities KAB04_01679 SM00448 cheY-homologous receiver domain KAB04_01680 SM00091 PAS domain KAB04_01680 SM00387 Histidine kinase-like ATPases KAB04_01680 SM00388 His Kinase A (phosphoacceptor) domain KAB04_01681 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_01687 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB04_01689 SM00935 Outer membrane protein (OmpH-like) KAB04_01695 SM00382 ATPases associated with a variety of cellular activities KAB04_01696 SM00363 S4 RNA-binding domain KAB04_01702 SM00344 helix_turn_helix ASNC type KAB04_01712 SM00052 Putative diguanylate phosphodiesterase KAB04_01712 SM00091 PAS domain KAB04_01712 SM00267 diguanylate cyclase KAB04_01714 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB04_01730 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB04_01735 SM00382 ATPases associated with a variety of cellular activities KAB04_01735 SM00962 SRP54-type protein, GTPase domain KAB04_01735 SM00963 SRP54-type protein, helical bundle domain KAB04_01749 SM01264 KAB04_01749 KAB04_01757 SM00859 Semialdehyde dehydrogenase, NAD binding domain KAB04_01760 SM00382 ATPases associated with a variety of cellular activities KAB04_01760 SM01086 C-terminal, D2-small domain, of ClpB protein KAB04_01773 SM01192 KAB04_01773 KAB04_01773 SM01193 KAB04_01773 KAB04_01777 SM00882 Coenzyme A transferase KAB04_01778 SM00882 Coenzyme A transferase KAB04_01780 SM00998 Adenylosuccinate lyase C-terminus KAB04_01787 SM00710 Parallel beta-helix repeats KAB04_01789 SM00564 beta-propeller repeat KAB04_01793 SM00849 Metallo-beta-lactamase superfamily KAB04_01794 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_01798 SM00855 Phosphoglycerate mutase family KAB04_01802 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB04_01811 SM00903 Flavin reductase like domain KAB04_01812 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01819 SM00882 Coenzyme A transferase KAB04_01820 SM00882 Coenzyme A transferase KAB04_01823 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KAB04_01826 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_01826 SM00895 KAB04_01826 KAB04_01833 SM00855 Phosphoglycerate mutase family KAB04_01836 SM00091 PAS domain KAB04_01836 SM00382 ATPases associated with a variety of cellular activities KAB04_01840 SM00829 Enoylreductase KAB04_01844 SM01060 KAB04_01844 KAB04_01848 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB04_01852 SM00422 helix_turn_helix, mercury resistance KAB04_01867 SM00912 haemagglutination activity domain KAB04_01873 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_01873 SM00866 KAB04_01873 KAB04_01879 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_01896 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01899 SM00829 Enoylreductase KAB04_01902 SM00382 ATPases associated with a variety of cellular activities KAB04_01904 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01906 SM01400 KAB04_01906 KAB04_01922 SM00421 helix_turn_helix, Lux Regulon KAB04_01933 SM00530 Helix-turn-helix XRE-family like proteins KAB04_01944 SM00822 KAB04_01944 KAB04_01945 SM00822 KAB04_01945 KAB04_01947 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01949 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB04_01949 SM00387 Histidine kinase-like ATPases KAB04_01949 SM00388 His Kinase A (phosphoacceptor) domain KAB04_01950 SM00448 cheY-homologous receiver domain KAB04_01950 SM00862 Transcriptional regulatory protein, C terminal KAB04_01970 SM00829 Enoylreductase KAB04_01975 SM00155 Phospholipase D. Active site motifs. KAB04_01980 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_01989 SM00382 ATPases associated with a variety of cellular activities KAB04_01996 SM00342 helix_turn_helix, arabinose operon control protein KAB04_01998 SM00903 Flavin reductase like domain KAB04_02010 SM00882 Coenzyme A transferase KAB04_02011 SM00882 Coenzyme A transferase KAB04_02022 SM00567 E-Z type HEAT repeats KAB04_02023 SM00382 ATPases associated with a variety of cellular activities KAB04_02028 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02028 SM00866 KAB04_02028 KAB04_02032 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02037 SM00849 Metallo-beta-lactamase superfamily KAB04_02038 SM00382 ATPases associated with a variety of cellular activities KAB04_02040 SM00829 Enoylreductase KAB04_02044 SM00861 Transketolase, pyrimidine binding domain KAB04_02046 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_02049 SM00267 diguanylate cyclase KAB04_02054 SM00382 ATPases associated with a variety of cellular activities KAB04_02060 SM00341 Helicase and RNase D C-terminal KAB04_02060 SM00474 3'-5' exonuclease KAB04_02061 SM00493 KAB04_02061 KAB04_02073 SM01324 KAB04_02073 KAB04_02081 SM00382 ATPases associated with a variety of cellular activities KAB04_02093 SM00855 Phosphoglycerate mutase family KAB04_02098 SM01006 Siderophore biosynthesis protein domain KAB04_02116 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02118 SM00411 bacterial (prokaryotic) histone like domain KAB04_02125 SM00271 DnaJ molecular chaperone homology domain KAB04_02128 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain KAB04_02130 SM00487 DEAD-like helicases superfamily KAB04_02130 SM00490 helicase superfamily c-terminal domain KAB04_02130 SM00982 KAB04_02130 KAB04_02130 SM01058 CarD-like/TRCF domain KAB04_02141 SM00382 ATPases associated with a variety of cellular activities KAB04_02156 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02159 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB04_02161 SM00411 bacterial (prokaryotic) histone like domain KAB04_02162 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_02167 SM00986 Uracil DNA glycosylase superfamily KAB04_02167 SM00987 UreE urease accessory protein, C-terminal domain KAB04_02179 SM00382 ATPases associated with a variety of cellular activities KAB04_02182 SM00470 ParB-like nuclease domain KAB04_02194 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KAB04_02196 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KAB04_02200 SM00382 ATPases associated with a variety of cellular activities KAB04_02202 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02206 SM00344 helix_turn_helix ASNC type KAB04_02213 SM00867 YceI-like domain KAB04_02215 SM00861 Transketolase, pyrimidine binding domain KAB04_02222 SM00530 Helix-turn-helix XRE-family like proteins KAB04_02226 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_02226 SM00876 Biotin and Thiamin Synthesis associated domain KAB04_02243 SM01236 KAB04_02243 KAB04_02245 SM00563 Phosphate acyltransferases KAB04_02249 SM00344 helix_turn_helix ASNC type KAB04_02251 SM00382 ATPases associated with a variety of cellular activities KAB04_02254 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_02261 SM00382 ATPases associated with a variety of cellular activities KAB04_02261 SM00930 KAB04_02261 KAB04_02265 SM00100 Cyclic nucleotide-monophosphate binding domain KAB04_02265 SM00419 helix_turn_helix, cAMP Regulatory protein KAB04_02272 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KAB04_02275 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02280 SM00870 KAB04_02280 KAB04_02281 SM00481 DNA polymerase alpha chain like domain KAB04_02291 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KAB04_02297 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02297 SM00895 KAB04_02297 KAB04_02302 SM00382 ATPases associated with a variety of cellular activities KAB04_02303 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_02314 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02318 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KAB04_02328 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02335 SM00822 KAB04_02335 KAB04_02336 SM00450 Rhodanese Homology Domain KAB04_02342 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_02343 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_02344 SM00382 ATPases associated with a variety of cellular activities KAB04_02348 SM00421 helix_turn_helix, Lux Regulon KAB04_02348 SM00448 cheY-homologous receiver domain KAB04_02349 SM00387 Histidine kinase-like ATPases KAB04_02349 SM00388 His Kinase A (phosphoacceptor) domain KAB04_02349 SM00448 cheY-homologous receiver domain KAB04_02351 SM00344 helix_turn_helix ASNC type KAB04_02355 SM00384 DNA binding domain with preference for A/T rich regions KAB04_02358 SM01060 KAB04_02358 KAB04_02359 SM01236 KAB04_02359 KAB04_02377 SM00878 Biotin carboxylase C-terminal domain KAB04_02386 SM00882 Coenzyme A transferase KAB04_02387 SM00882 Coenzyme A transferase KAB04_02394 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_02398 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_02406 SM00382 ATPases associated with a variety of cellular activities KAB04_02408 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02408 SM00866 KAB04_02408 KAB04_02410 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_02419 SM00903 Flavin reductase like domain KAB04_02422 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02422 SM00895 KAB04_02422 KAB04_02425 SM01060 KAB04_02425 KAB04_02450 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02455 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_02455 SM00895 KAB04_02455 KAB04_02457 SM01130 KAB04_02457 KAB04_02460 SM00422 helix_turn_helix, mercury resistance KAB04_02465 SM00382 ATPases associated with a variety of cellular activities KAB04_02473 SM00796 Allophanate hydrolase subunit 1 KAB04_02473 SM00797 Allophanate hydrolase subunit 2 KAB04_02473 SM00878 Biotin carboxylase C-terminal domain KAB04_02476 SM00829 Enoylreductase KAB04_02482 SM00671 Sel1-like repeats. KAB04_02484 SM00878 Biotin carboxylase C-terminal domain KAB04_02485 SM00796 Allophanate hydrolase subunit 1 KAB04_02485 SM00797 Allophanate hydrolase subunit 2 KAB04_02500 SM00422 helix_turn_helix, mercury resistance KAB04_02505 SM00052 Putative diguanylate phosphodiesterase KAB04_02507 SM00344 helix_turn_helix ASNC type KAB04_02508 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KAB04_02508 SM00534 ATPase domain of DNA mismatch repair MUTS family KAB04_02517 SM00382 ATPases associated with a variety of cellular activities KAB04_02519 SM00382 ATPases associated with a variety of cellular activities KAB04_02523 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB04_02524 SM00840 KAB04_02524 KAB04_02538 SM00357 Cold shock protein domain KAB04_02543 SM00530 Helix-turn-helix XRE-family like proteins KAB04_02553 SM00422 helix_turn_helix, mercury resistance KAB04_02565 SM00382 ATPases associated with a variety of cellular activities KAB04_02565 SM00487 DEAD-like helicases superfamily KAB04_02565 SM00490 helicase superfamily c-terminal domain KAB04_02565 SM00847 Helicase associated domain (HA2) Add an annotation KAB04_02581 SM00981 KAB04_02581 KAB04_02584 SM00382 ATPases associated with a variety of cellular activities KAB04_02584 SM01086 C-terminal, D2-small domain, of ClpB protein KAB04_02588 SM00100 Cyclic nucleotide-monophosphate binding domain KAB04_02588 SM00419 helix_turn_helix, cAMP Regulatory protein KAB04_02594 SM00788 Adenylosuccinate synthetase KAB04_02596 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB04_02597 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KAB04_02625 SM00267 diguanylate cyclase KAB04_02627 SM00479 KAB04_02627 KAB04_02631 SM00382 ATPases associated with a variety of cellular activities KAB04_02635 SM00257 Lysin motif KAB04_02636 SM00479 KAB04_02636 KAB04_02647 SM00422 helix_turn_helix, mercury resistance KAB04_02651 SM01011 Aminopeptidase P, N-terminal domain KAB04_02670 SM00530 Helix-turn-helix XRE-family like proteins KAB04_02676 SM00287 Bacterial SH3 domain homologues KAB04_02718 SM00530 Helix-turn-helix XRE-family like proteins KAB04_02739 SM00382 ATPases associated with a variety of cellular activities KAB04_02739 SM00464 Found in ATP-dependent protease La (LON) KAB04_02743 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB04_02745 SM00478 endonuclease III KAB04_02754 SM00988 UreE urease accessory protein, N-terminal domain KAB04_02764 SM01091 Transporter associated domain KAB04_02784 SM00382 ATPases associated with a variety of cellular activities KAB04_02786 SM00947 Carbonic anhydrase KAB04_02798 SM01018 B12 binding domain KAB04_02799 SM00861 Transketolase, pyrimidine binding domain KAB04_02802 SM00822 KAB04_02802 KAB04_02807 SM00342 helix_turn_helix, arabinose operon control protein KAB04_02821 SM00822 KAB04_02821 KAB04_02825 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_02833 SM01322 KAB04_02833 KAB04_02856 SM00965 Secretin and TonB N terminus short domain KAB04_02860 SM01130 KAB04_02860 KAB04_02868 SM00382 ATPases associated with a variety of cellular activities KAB04_02883 SM00530 Helix-turn-helix XRE-family like proteins KAB04_02932 SM00530 Helix-turn-helix XRE-family like proteins KAB04_02937 SM00382 ATPases associated with a variety of cellular activities KAB04_02960 SM00479 KAB04_02960 KAB04_02970 SM01004 Delta-aminolevulinic acid dehydratase KAB04_02979 SM00382 ATPases associated with a variety of cellular activities KAB04_02993 SM00563 Phosphate acyltransferases KAB04_03002 SM00843 KAB04_03002 KAB04_03010 SM00838 Elongation factor G C-terminus KAB04_03010 SM00889 Elongation factor G, domain IV KAB04_03014 SM00825 Beta-ketoacyl synthase KAB04_03026 SM01329 KAB04_03026 KAB04_03035 SM00363 S4 RNA-binding domain KAB04_03037 SM00400 zinc finger KAB04_03037 SM00493 KAB04_03037 KAB04_03039 SM00028 Tetratricopeptide repeats KAB04_03045 SM01400 KAB04_03045 KAB04_03056 SM00257 Lysin motif KAB04_03058 SM00822 KAB04_03058 KAB04_03059 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KAB04_03066 SM00363 S4 RNA-binding domain KAB04_03076 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB04_03076 SM00292 breast cancer carboxy-terminal domain KAB04_03076 SM00532 Ligase N family KAB04_03077 SM00771 ZipA, C-terminal domain (FtsZ-binding) KAB04_03079 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_03083 SM00382 ATPases associated with a variety of cellular activities KAB04_03083 SM00962 SRP54-type protein, GTPase domain KAB04_03083 SM00963 SRP54-type protein, helical bundle domain KAB04_03111 SM00357 Cold shock protein domain KAB04_03120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KAB04_03120 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB04_03121 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB04_03126 SM00267 diguanylate cyclase KAB04_03128 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB04_03128 SM00387 Histidine kinase-like ATPases KAB04_03128 SM00388 His Kinase A (phosphoacceptor) domain KAB04_03129 SM00448 cheY-homologous receiver domain KAB04_03129 SM00862 Transcriptional regulatory protein, C terminal KAB04_03135 SM00387 Histidine kinase-like ATPases KAB04_03149 SM00564 beta-propeller repeat KAB04_03162 SM00974 KAB04_03162 KAB04_03169 SM00903 Flavin reductase like domain KAB04_03175 SM00342 helix_turn_helix, arabinose operon control protein KAB04_03233 SM00331 Sigma factor PP2C-like phosphatases KAB04_03237 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB04_03239 SM00382 ATPases associated with a variety of cellular activities KAB04_03243 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KAB04_03243 SM00474 3'-5' exonuclease KAB04_03243 SM00475 5'-3' exonuclease KAB04_03243 SM00482 DNA polymerase A domain KAB04_03246 SM00977 TilS substrate C-terminal domain KAB04_03250 SM00357 Cold shock protein domain KAB04_03250 SM00382 ATPases associated with a variety of cellular activities KAB04_03250 SM00959 Rho termination factor, N-terminal domain KAB04_03252 SM00411 bacterial (prokaryotic) histone like domain KAB04_03253 SM00873 B3/4 domain KAB04_03253 SM00874 tRNA synthetase B5 domain KAB04_03253 SM00896 Ferredoxin-fold anticodon binding domain KAB04_03264 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KAB04_03273 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB04_03276 SM00954 Region found in RelA / SpoT proteins KAB04_03280 SM00073 Histidine Phosphotransfer domain KAB04_03280 SM00387 Histidine kinase-like ATPases KAB04_03280 SM00388 His Kinase A (phosphoacceptor) domain KAB04_03280 SM00448 cheY-homologous receiver domain KAB04_03288 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KAB04_03288 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KAB04_03302 SM01236 KAB04_03302 KAB04_03306 SM00052 Putative diguanylate phosphodiesterase KAB04_03306 SM00267 diguanylate cyclase KAB04_03315 SM00382 ATPases associated with a variety of cellular activities KAB04_03319 SM00479 KAB04_03319 KAB04_03321 SM00450 Rhodanese Homology Domain KAB04_03326 SM00825 Beta-ketoacyl synthase KAB04_03327 SM00822 KAB04_03327 KAB04_03329 SM00825 Beta-ketoacyl synthase KAB04_03342 SM00563 Phosphate acyltransferases KAB04_03345 SM00564 beta-propeller repeat KAB04_03350 SM00028 Tetratricopeptide repeats KAB04_03352 SM00562 KAB04_03352 KAB04_03354 SM00014 Acid phosphatase homologues KAB04_03356 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB04_03356 SM00245 tail specific protease KAB04_03371 SM00382 ATPases associated with a variety of cellular activities KAB04_03371 SM00994 ClpX C4-type zinc finger KAB04_03371 SM01086 C-terminal, D2-small domain, of ClpB protein KAB04_03375 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. KAB04_03376 SM00917 LeuA allosteric (dimerisation) domain KAB04_03379 SM00671 Sel1-like repeats. KAB04_03407 SM00360 RNA recognition motif KAB04_03411 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KAB04_03411 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KAB04_03411 SM00493 KAB04_03411 KAB04_03414 SM00829 Enoylreductase KAB04_03416 SM00382 ATPases associated with a variety of cellular activities KAB04_03422 SM00859 Semialdehyde dehydrogenase, NAD binding domain KAB04_03425 SM00870 KAB04_03425 KAB04_03427 SM00342 helix_turn_helix, arabinose operon control protein KAB04_03428 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_03431 SM01329 KAB04_03431 KAB04_03441 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KAB04_03449 SM00363 S4 RNA-binding domain KAB04_03450 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_03456 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_03469 SM00849 Metallo-beta-lactamase superfamily KAB04_03476 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB04_03476 SM01091 Transporter associated domain KAB04_03483 SM00487 DEAD-like helicases superfamily KAB04_03483 SM00490 helicase superfamily c-terminal domain KAB04_03488 SM00271 DnaJ molecular chaperone homology domain KAB04_03491 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_03491 SM00322 K homology RNA-binding domain KAB04_03492 SM01387 KAB04_03492 KAB04_03494 SM00382 ATPases associated with a variety of cellular activities KAB04_03515 SM00316 Ribosomal protein S1-like RNA-binding domain KAB04_03527 SM00967 RNA 2'-O ribose methyltransferase substrate binding KAB04_03532 SM00732 Likely ribonuclease with RNase H fold. KAB04_03536 SM00346 helix_turn_helix isocitrate lyase regulation KAB04_03538 SM00342 helix_turn_helix, arabinose operon control protein KAB04_03541 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB04_03541 SM00465 GIY-YIG type nucleases (URI domain) KAB04_03553 SM00422 helix_turn_helix, mercury resistance KAB04_03558 SM00387 Histidine kinase-like ATPases KAB04_03566 SM00663 RNA polymerase I subunit A N-terminus KAB04_03571 SM00649 Ribosomal protein L11/L12 KAB04_03572 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KAB04_03572 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KAB04_03582 SM00240 Forkhead associated domain KAB04_03584 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB04_03586 SM00528 Domain in histone-like proteins of HNS family KAB04_03592 SM00448 cheY-homologous receiver domain KAB04_03592 SM00850 LytTr DNA-binding domain KAB04_03610 SM00899 KAB04_03610 KAB04_03616 SM00421 helix_turn_helix, Lux Regulon KAB04_03616 SM00448 cheY-homologous receiver domain KAB04_03617 SM00387 Histidine kinase-like ATPases KAB04_03617 SM00388 His Kinase A (phosphoacceptor) domain KAB04_03618 SM00382 ATPases associated with a variety of cellular activities KAB04_03618 SM00448 cheY-homologous receiver domain KAB04_03619 SM00245 tail specific protease KAB04_03632 SM00938 Nitrogen regulatory protein P-II KAB04_03640 SM00382 ATPases associated with a variety of cellular activities KAB04_03644 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_03645 SM01007 Class II Aldolase and Adducin N-terminal domain KAB04_03646 SM01130 KAB04_03646 KAB04_03654 SM00434 DNA Topoisomerase IV KAB04_03658 SM01091 Transporter associated domain KAB04_03661 SM00641 Glycosyl hydrolases family 25 KAB04_03665 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB04_03667 SM00422 helix_turn_helix, mercury resistance KAB04_03690 SM00342 helix_turn_helix, arabinose operon control protein KAB04_03694 SM00382 ATPases associated with a variety of cellular activities KAB04_03704 SM00382 ATPases associated with a variety of cellular activities KAB04_03708 SM00919 Malic enzyme, NAD binding domain KAB04_03708 SM01274 KAB04_03708 KAB04_03709 SM00836 DALR anticodon binding domain KAB04_03709 SM01016 Arginyl tRNA synthetase N terminal dom KAB04_03732 SM00823 Phosphopantetheine attachment site KAB04_03732 SM00824 Thioesterase KAB04_03733 SM00823 Phosphopantetheine attachment site KAB04_03733 SM01294 KAB04_03733 KAB04_03737 SM00421 helix_turn_helix, Lux Regulon KAB04_03751 SM01005 Alanine racemase, C-terminal domain KAB04_03753 SM00344 helix_turn_helix ASNC type KAB04_03764 SM00825 Beta-ketoacyl synthase KAB04_03775 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_03775 SM00895 KAB04_03775 KAB04_03779 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB04_03779 SM00895 KAB04_03779 KAB04_03784 SM00984 UDP binding domain KAB04_03799 SM00984 UDP binding domain KAB04_03801 SM00226 Low molecular weight phosphatase family KAB04_03806 SM00644 KAB04_03806 KAB04_03823 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_03824 SM00062 Bacterial periplasmic substrate-binding proteins KAB04_03827 SM00382 ATPases associated with a variety of cellular activities KAB04_03831 SM00904 Riboflavin kinase KAB04_03845 SM00849 Metallo-beta-lactamase superfamily KAB04_03849 SM00235 Zinc-dependent metalloprotease KAB04_03850 SM00235 Zinc-dependent metalloprotease KAB04_03854 SM01001 AIR carboxylase KAB04_03858 SM00014 Acid phosphatase homologues KAB04_03872 SM01234 KAB04_03872 KAB04_03890 SM00857 Resolvase, N terminal domain KAB04_03930 SM00318 Staphylococcal nuclease homologues KAB04_03932 SM00528 Domain in histone-like proteins of HNS family KAB04_03939 SM00487 DEAD-like helicases superfamily KAB04_03939 SM00490 helicase superfamily c-terminal domain KAB04_03943 SM00530 Helix-turn-helix XRE-family like proteins KAB04_03947 SM00382 ATPases associated with a variety of cellular activities KAB04_03956 SM00470 ParB-like nuclease domain KAB04_03976 SM00530 Helix-turn-helix XRE-family like proteins KAB04_03990 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KAB04_03993 SM00382 ATPases associated with a variety of cellular activities KAB04_04011 SM00857 Resolvase, N terminal domain