locus-tag class description KAB05_00001 PF00579 tRNA synthetases class I (W and Y) KAB05_00002 PF03702 Anhydro-N-acetylmuramic acid kinase KAB05_00003 PF00561 alpha/beta hydrolase fold KAB05_00004 PF01521 Iron-sulphur cluster biosynthesis KAB05_00008 PF00005 ABC transporter KAB05_00008 PF12848 ABC transporter KAB05_00009 PF09335 SNARE associated Golgi protein KAB05_00011 PF00986 DNA gyrase B subunit, carboxyl terminus KAB05_00011 PF18053 DNA gyrase B subunit insert domain KAB05_00011 PF01751 Toprim domain KAB05_00011 PF00204 DNA gyrase B KAB05_00011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00012 PF02463 RecF/RecN/SMC N terminal domain KAB05_00013 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB05_00013 PF02767 DNA polymerase III beta subunit, central domain KAB05_00013 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB05_00014 PF11638 DnaA N-terminal domain KAB05_00014 PF08299 Bacterial dnaA protein helix-turn-helix KAB05_00014 PF00308 Bacterial dnaA protein KAB05_00015 PF00468 Ribosomal protein L34 KAB05_00016 PF00825 Ribonuclease P KAB05_00017 PF01809 Putative membrane protein insertion efficiency factor KAB05_00018 PF02096 60Kd inner membrane protein KAB05_00018 PF14849 YidC periplasmic domain KAB05_00019 PF01926 50S ribosome-binding GTPase KAB05_00019 PF12631 MnmE helical domain KAB05_00019 PF10396 GTP-binding protein TrmE N-terminus KAB05_00020 PF02583 Metal-sensitive transcriptional repressor KAB05_00021 PF16916 Dimerisation domain of Zinc Transporter KAB05_00021 PF01545 Cation efflux family KAB05_00022 PF13098 Thioredoxin-like domain KAB05_00022 PF10411 Disulfide bond isomerase protein N-terminus KAB05_00024 PF00156 Phosphoribosyl transferase domain KAB05_00026 PF01979 Amidohydrolase family KAB05_00027 PF00355 Rieske [2Fe-2S] domain KAB05_00028 PF03738 Glutathionylspermidine synthase preATP-grasp KAB05_00030 PF03741 Integral membrane protein TerC family KAB05_00031 PF01569 PAP2 superfamily KAB05_00033 PF08245 Mur ligase middle domain KAB05_00033 PF01225 Mur ligase family, catalytic domain KAB05_00033 PF02875 Mur ligase family, glutamate ligase domain KAB05_00035 PF00731 AIR carboxylase KAB05_00036 PF02222 ATP-grasp domain KAB05_00036 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KAB05_00037 PF13406 Transglycosylase SLT domain KAB05_00041 PF00012 Hsp70 protein KAB05_00042 PF01025 GrpE KAB05_00043 PF03466 LysR substrate binding domain KAB05_00043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00048 PF07859 alpha/beta hydrolase fold KAB05_00049 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB05_00056 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB05_00057 PF01252 Signal peptidase (SPase) II KAB05_00058 PF06827 Zinc finger found in FPG and IleRS KAB05_00058 PF00133 tRNA synthetases class I (I, L, M and V) KAB05_00058 PF08264 Anticodon-binding domain of tRNA KAB05_00059 PF01687 Riboflavin kinase KAB05_00059 PF06574 FAD synthetase KAB05_00061 PF01048 Phosphorylase superfamily KAB05_00062 PF00440 Bacterial regulatory proteins, tetR family KAB05_00062 PF08362 YcdC-like protein, C-terminal region KAB05_00063 PF00005 ABC transporter KAB05_00064 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_00065 PF00296 Luciferase-like monooxygenase KAB05_00066 PF09084 NMT1/THI5 like KAB05_00067 PF09084 NMT1/THI5 like KAB05_00068 PF00696 Amino acid kinase family KAB05_00068 PF00583 Acetyltransferase (GNAT) family KAB05_00071 PF00106 short chain dehydrogenase KAB05_00072 PF13419 Haloacid dehalogenase-like hydrolase KAB05_00074 PF01323 DSBA-like thioredoxin domain KAB05_00075 PF08360 QacR-like protein, C-terminal region KAB05_00075 PF00440 Bacterial regulatory proteins, tetR family KAB05_00076 PF00440 Bacterial regulatory proteins, tetR family KAB05_00077 PF00175 Oxidoreductase NAD-binding domain KAB05_00078 PF00487 Fatty acid desaturase KAB05_00079 PF01138 3' exoribonuclease family, domain 1 KAB05_00079 PF03725 3' exoribonuclease family, domain 2 KAB05_00080 PF05506 Domain of unknown function (DUF756) KAB05_00080 PF04185 Phosphoesterase family KAB05_00082 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KAB05_00082 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KAB05_00083 PF01510 N-acetylmuramoyl-L-alanine amidase KAB05_00084 PF03023 Lipid II flippase MurJ KAB05_00085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB05_00085 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB05_00086 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB05_00086 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB05_00087 PF13807 G-rich domain on putative tyrosine kinase KAB05_00087 PF13614 AAA domain KAB05_00087 PF02706 Chain length determinant protein KAB05_00088 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB05_00089 PF10531 SLBB domain KAB05_00089 PF02563 Polysaccharide biosynthesis/export protein KAB05_00089 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KAB05_00090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB05_00090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB05_00090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB05_00091 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB05_00091 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB05_00091 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB05_00092 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB05_00092 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB05_00092 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB05_00093 PF02719 Polysaccharide biosynthesis protein KAB05_00094 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAB05_00095 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB05_00096 PF08666 SAF domain KAB05_00096 PF03102 NeuB family KAB05_00097 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_00098 PF00483 Nucleotidyl transferase KAB05_00099 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KAB05_00099 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KAB05_00100 PF02348 Cytidylyltransferase KAB05_00105 PF08485 Polysaccharide biosynthesis protein C-terminal KAB05_00105 PF02719 Polysaccharide biosynthesis protein KAB05_00106 PF01370 NAD dependent epimerase/dehydratase family KAB05_00107 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB05_00108 PF13579 Glycosyl transferase 4-like domain KAB05_00109 PF01370 NAD dependent epimerase/dehydratase family KAB05_00110 PF01370 NAD dependent epimerase/dehydratase family KAB05_00111 PF00953 Glycosyl transferase family 4 KAB05_00112 PF02397 Bacterial sugar transferase KAB05_00113 PF00483 Nucleotidyl transferase KAB05_00114 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB05_00114 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB05_00114 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB05_00115 PF00342 Phosphoglucose isomerase KAB05_00116 PF16363 GDP-mannose 4,6 dehydratase KAB05_00117 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB05_00117 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB05_00117 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB05_00117 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB05_00118 PF02652 L-lactate permease KAB05_00119 PF07729 FCD domain KAB05_00119 PF00392 Bacterial regulatory proteins, gntR family KAB05_00120 PF01070 FMN-dependent dehydrogenase KAB05_00121 PF09330 D-lactate dehydrogenase, membrane binding KAB05_00121 PF01565 FAD binding domain KAB05_00122 PF00155 Aminotransferase class I and II KAB05_00123 PF07729 FCD domain KAB05_00123 PF00392 Bacterial regulatory proteins, gntR family KAB05_00125 PF00285 Citrate synthase, C-terminal domain KAB05_00126 PF00330 Aconitase family (aconitate hydratase) KAB05_00126 PF00694 Aconitase C-terminal domain KAB05_00138 PF00849 RNA pseudouridylate synthase KAB05_00141 PF00593 TonB dependent receptor KAB05_00141 PF07715 TonB-dependent Receptor Plug Domain KAB05_00143 PF01037 Lrp/AsnC ligand binding domain KAB05_00144 PF01266 FAD dependent oxidoreductase KAB05_00145 PF01168 Alanine racemase, N-terminal domain KAB05_00145 PF00842 Alanine racemase, C-terminal domain KAB05_00146 PF01042 Endoribonuclease L-PSP KAB05_00147 PF00324 Amino acid permease KAB05_00148 PF00324 Amino acid permease KAB05_00150 PF00171 Aldehyde dehydrogenase family KAB05_00151 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB05_00151 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB05_00152 PF13193 AMP-binding enzyme C-terminal domain KAB05_00152 PF00501 AMP-binding enzyme KAB05_00153 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_00153 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_00153 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_00154 PF00378 Enoyl-CoA hydratase/isomerase KAB05_00155 PF00378 Enoyl-CoA hydratase/isomerase KAB05_00156 PF07690 Major Facilitator Superfamily KAB05_00156 PF00083 Sugar (and other) transporter KAB05_00157 PF00765 Autoinducer synthase KAB05_00159 PF00196 Bacterial regulatory proteins, luxR family KAB05_00159 PF03472 Autoinducer binding domain KAB05_00160 PF00501 AMP-binding enzyme KAB05_00161 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_00161 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_00161 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_00162 PF16197 Ketoacyl-synthetase C-terminal extension KAB05_00162 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB05_00162 PF00975 Thioesterase domain KAB05_00162 PF08242 Methyltransferase domain KAB05_00162 PF14765 Polyketide synthase dehydratase KAB05_00162 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB05_00162 PF00550 Phosphopantetheine attachment site KAB05_00163 PF00501 AMP-binding enzyme KAB05_00163 PF13193 AMP-binding enzyme C-terminal domain KAB05_00163 PF00668 Condensation domain KAB05_00163 PF07993 Male sterility protein KAB05_00163 PF00550 Phosphopantetheine attachment site KAB05_00164 PF00975 Thioesterase domain KAB05_00164 PF00501 AMP-binding enzyme KAB05_00164 PF13193 AMP-binding enzyme C-terminal domain KAB05_00164 PF00550 Phosphopantetheine attachment site KAB05_00164 PF00668 Condensation domain KAB05_00167 PF12697 Alpha/beta hydrolase family KAB05_00168 PF01648 4'-phosphopantetheinyl transferase superfamily KAB05_00171 PF01722 BolA-like protein KAB05_00173 PF13614 AAA domain KAB05_00176 PF09335 SNARE associated Golgi protein KAB05_00177 PF07681 DoxX KAB05_00178 PF04286 Protein of unknown function (DUF445) KAB05_00179 PF02540 NAD synthase KAB05_00179 PF00958 GMP synthase C terminal domain KAB05_00179 PF00117 Glutamine amidotransferase class-I KAB05_00180 PF01909 Nucleotidyltransferase domain KAB05_00180 PF13427 Domain of unknown function (DUF4111) KAB05_00181 PF03551 Transcriptional regulator PadR-like family KAB05_00183 PF05726 Pirin C-terminal cupin domain KAB05_00183 PF02678 Pirin KAB05_00187 PF05746 DALR anticodon binding domain KAB05_00187 PF03485 Arginyl tRNA synthetase N terminal domain KAB05_00187 PF00750 tRNA synthetases class I (R) KAB05_00188 PF00390 Malic enzyme, N-terminal domain KAB05_00188 PF03949 Malic enzyme, NAD binding domain KAB05_00190 PF04261 Dyp-type peroxidase family KAB05_00191 PF01810 LysE type translocator KAB05_00192 PF00950 ABC 3 transport family KAB05_00193 PF00005 ABC transporter KAB05_00197 PF00119 ATP synthase A chain KAB05_00198 PF00137 ATP synthase subunit C KAB05_00199 PF00430 ATP synthase B/B' CF(0) KAB05_00200 PF00213 ATP synthase delta (OSCP) subunit KAB05_00201 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB05_00201 PF00306 ATP synthase alpha/beta chain, C terminal domain KAB05_00201 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB05_00202 PF00231 ATP synthase KAB05_00203 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB05_00203 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB05_00204 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KAB05_00206 PF00255 Glutathione peroxidase KAB05_00208 PF07690 Major Facilitator Superfamily KAB05_00209 PF00440 Bacterial regulatory proteins, tetR family KAB05_00210 PF00892 EamA-like transporter family KAB05_00211 PF01300 Telomere recombination KAB05_00212 PF02481 DNA recombination-mediator protein A KAB05_00212 PF17782 DprA winged helix domain KAB05_00214 PF01327 Polypeptide deformylase KAB05_00219 PF00440 Bacterial regulatory proteins, tetR family KAB05_00226 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_00228 PF03358 NADPH-dependent FMN reductase KAB05_00232 PF11842 Domain of unknown function (DUF3362) KAB05_00232 PF04055 Radical SAM superfamily KAB05_00232 PF08497 Radical SAM N-terminal KAB05_00235 PF11798 IMS family HHH motif KAB05_00235 PF11799 impB/mucB/samB family C-terminal domain KAB05_00235 PF00817 impB/mucB/samB family KAB05_00237 PF07690 Major Facilitator Superfamily KAB05_00238 PF03641 Possible lysine decarboxylase KAB05_00239 PF03741 Integral membrane protein TerC family KAB05_00239 PF03471 Transporter associated domain KAB05_00240 PF02810 SEC-C motif KAB05_00241 PF03458 UPF0126 domain KAB05_00242 PF07690 Major Facilitator Superfamily KAB05_00243 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB05_00243 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB05_00244 PF00501 AMP-binding enzyme KAB05_00244 PF13193 AMP-binding enzyme C-terminal domain KAB05_00247 PF00719 Inorganic pyrophosphatase KAB05_00248 PF03573 outer membrane porin, OprD family KAB05_00251 PF00701 Dihydrodipicolinate synthetase family KAB05_00253 PF00155 Aminotransferase class I and II KAB05_00253 PF00392 Bacterial regulatory proteins, gntR family KAB05_00254 PF01078 Magnesium chelatase, subunit ChlI KAB05_00254 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB05_00256 PF00665 Integrase core domain KAB05_00260 PF00582 Universal stress protein family KAB05_00261 PF01740 STAS domain KAB05_00261 PF00916 Sulfate permease family KAB05_00263 PF01078 Magnesium chelatase, subunit ChlI KAB05_00263 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB05_00265 PF00543 Nitrogen regulatory protein P-II KAB05_00266 PF00909 Ammonium Transporter Family KAB05_00267 PF03477 ATP cone domain KAB05_00268 PF01872 RibD C-terminal domain KAB05_00268 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB05_00270 PF00677 Lumazine binding domain KAB05_00274 PF02789 Cytosol aminopeptidase family, N-terminal domain KAB05_00274 PF00883 Cytosol aminopeptidase family, catalytic domain KAB05_00276 PF03739 Lipopolysaccharide export system permease LptF/LptG KAB05_00277 PF01676 Metalloenzyme superfamily KAB05_00277 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KAB05_00278 PF00595 PDZ domain KAB05_00278 PF03572 Peptidase family S41 KAB05_00279 PF02954 Bacterial regulatory protein, Fis family KAB05_00279 PF00072 Response regulator receiver domain KAB05_00279 PF00158 Sigma-54 interaction domain KAB05_00280 PF00512 His Kinase A (phospho-acceptor) domain KAB05_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00281 PF00196 Bacterial regulatory proteins, luxR family KAB05_00281 PF00072 Response regulator receiver domain KAB05_00282 PF00768 D-alanyl-D-alanine carboxypeptidase KAB05_00283 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_00284 PF01842 ACT domain KAB05_00284 PF03447 Homoserine dehydrogenase, NAD binding domain KAB05_00284 PF00742 Homoserine dehydrogenase KAB05_00285 PF10411 Disulfide bond isomerase protein N-terminus KAB05_00285 PF13098 Thioredoxin-like domain KAB05_00286 PF02899 Phage integrase, N-terminal SAM-like domain KAB05_00286 PF00589 Phage integrase family KAB05_00288 PF07664 Ferrous iron transport protein B C terminus KAB05_00288 PF07670 Nucleoside recognition KAB05_00288 PF02421 Ferrous iron transport protein B KAB05_00290 PF02875 Mur ligase family, glutamate ligase domain KAB05_00290 PF08245 Mur ligase middle domain KAB05_00291 PF08245 Mur ligase middle domain KAB05_00291 PF02875 Mur ligase family, glutamate ligase domain KAB05_00292 PF01098 Cell cycle protein KAB05_00293 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB05_00294 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAB05_00295 PF00149 Calcineurin-like phosphoesterase KAB05_00296 PF00293 NUDIX domain KAB05_00297 PF13667 ThiC-associated domain KAB05_00297 PF01964 Radical SAM ThiC family KAB05_00301 PF00892 EamA-like transporter family KAB05_00302 PF02321 Outer membrane efflux protein KAB05_00303 PF01895 PhoU domain KAB05_00304 PF04362 Bacterial Fe(2+) trafficking KAB05_00305 PF00206 Lyase KAB05_00305 PF14698 Argininosuccinate lyase C-terminal KAB05_00306 PF07694 5TMR of 5TMR-LYT KAB05_00306 PF06580 Histidine kinase KAB05_00306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00307 PF00072 Response regulator receiver domain KAB05_00307 PF04397 LytTr DNA-binding domain KAB05_00308 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAB05_00308 PF03900 Porphobilinogen deaminase, C-terminal domain KAB05_00314 PF00816 H-NS histone family KAB05_00318 PF03958 Bacterial type II/III secretion system short domain KAB05_00318 PF00263 Bacterial type II and III secretion system protein KAB05_00319 PF12401 Protein of unknown function (DUF2662) KAB05_00319 PF00498 FHA domain KAB05_00320 PF13419 Haloacid dehalogenase-like hydrolase KAB05_00321 PF04715 Anthranilate synthase component I, N terminal region KAB05_00321 PF00425 chorismate binding enzyme KAB05_00326 PF03143 Elongation factor Tu C-terminal domain KAB05_00326 PF03144 Elongation factor Tu domain 2 KAB05_00326 PF00009 Elongation factor Tu GTP binding domain KAB05_00328 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAB05_00329 PF00467 KOW motif KAB05_00329 PF02357 Transcription termination factor nusG KAB05_00330 PF03946 Ribosomal protein L11, N-terminal domain KAB05_00330 PF00298 Ribosomal protein L11, RNA binding domain KAB05_00331 PF00687 Ribosomal protein L1p/L10e family KAB05_00332 PF00466 Ribosomal protein L10 KAB05_00333 PF00542 Ribosomal protein L7/L12 C-terminal domain KAB05_00333 PF16320 Ribosomal protein L7/L12 dimerisation domain KAB05_00334 PF00562 RNA polymerase Rpb2, domain 6 KAB05_00334 PF10385 RNA polymerase beta subunit external 1 domain KAB05_00334 PF04565 RNA polymerase Rpb2, domain 3 KAB05_00334 PF04560 RNA polymerase Rpb2, domain 7 KAB05_00334 PF04561 RNA polymerase Rpb2, domain 2 KAB05_00334 PF04563 RNA polymerase beta subunit KAB05_00335 PF04998 RNA polymerase Rpb1, domain 5 KAB05_00335 PF05000 RNA polymerase Rpb1, domain 4 KAB05_00335 PF00623 RNA polymerase Rpb1, domain 2 KAB05_00335 PF04983 RNA polymerase Rpb1, domain 3 KAB05_00335 PF04997 RNA polymerase Rpb1, domain 1 KAB05_00339 PF00561 alpha/beta hydrolase fold KAB05_00340 PF13726 Na+-H+ antiporter family KAB05_00340 PF03553 Na+/H+ antiporter family KAB05_00343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00343 PF00183 Hsp90 protein KAB05_00346 PF01323 DSBA-like thioredoxin domain KAB05_00348 PF00376 MerR family regulatory protein KAB05_00348 PF09278 MerR, DNA binding KAB05_00352 PF02803 Thiolase, C-terminal domain KAB05_00352 PF00108 Thiolase, N-terminal domain KAB05_00353 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB05_00353 PF00378 Enoyl-CoA hydratase/isomerase KAB05_00353 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB05_00358 PF02151 UvrB/uvrC motif KAB05_00358 PF08459 UvrC Helix-hairpin-helix N-terminal KAB05_00358 PF01541 GIY-YIG catalytic domain KAB05_00360 PF01066 CDP-alcohol phosphatidyltransferase KAB05_00361 PF02805 Metal binding domain of Ada KAB05_00361 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB05_00361 PF12833 Helix-turn-helix domain KAB05_00361 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB05_00366 PF13533 Biotin-lipoyl like KAB05_00367 PF03652 Holliday junction resolvase KAB05_00368 PF02622 Uncharacterized ACR, COG1678 KAB05_00369 PF02463 RecF/RecN/SMC N terminal domain KAB05_00371 PF06865 Pyrimidine/purine nucleoside phosphorylase KAB05_00372 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB05_00372 PF00588 SpoU rRNA Methylase family KAB05_00374 PF01121 Dephospho-CoA kinase KAB05_00375 PF01478 Type IV leader peptidase family KAB05_00375 PF06750 Bacterial Peptidase A24 N-terminal domain KAB05_00376 PF00482 Type II secretion system (T2SS), protein F KAB05_00377 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAB05_00377 PF00437 Type II/IV secretion system protein KAB05_00378 PF00121 Triosephosphate isomerase KAB05_00379 PF03840 Preprotein translocase SecG subunit KAB05_00383 PF17384 RimP C-terminal SH3 domain KAB05_00383 PF02576 RimP N-terminal domain KAB05_00384 PF00575 S1 RNA binding domain KAB05_00384 PF08529 NusA N-terminal domain KAB05_00384 PF13184 NusA-like KH domain KAB05_00385 PF00009 Elongation factor Tu GTP binding domain KAB05_00385 PF08364 Bacterial translation initiation factor IF-2 associated region KAB05_00385 PF04760 Translation initiation factor IF-2, N-terminal region KAB05_00385 PF11987 Translation-initiation factor 2 KAB05_00386 PF02033 Ribosome-binding factor A KAB05_00388 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KAB05_00390 PF00361 Proton-conducting membrane transporter KAB05_00391 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB05_00392 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KAB05_00392 PF13244 Domain of unknown function (DUF4040) KAB05_00392 PF00361 Proton-conducting membrane transporter KAB05_00392 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB05_00395 PF01502 Phosphoribosyl-AMP cyclohydrolase KAB05_00396 PF01494 FAD binding domain KAB05_00397 PF01494 FAD binding domain KAB05_00398 PF03109 ABC1 family KAB05_00400 PF01209 ubiE/COQ5 methyltransferase family KAB05_00402 PF03976 Polyphosphate kinase 2 (PPK2) KAB05_00405 PF17946 RecC C-terminal domain KAB05_00406 PF12705 PD-(D/E)XK nuclease superfamily KAB05_00406 PF00580 UvrD/REP helicase N-terminal domain KAB05_00406 PF13361 UvrD-like helicase C-terminal domain KAB05_00407 PF00580 UvrD/REP helicase N-terminal domain KAB05_00407 PF13361 UvrD-like helicase C-terminal domain KAB05_00407 PF12705 PD-(D/E)XK nuclease superfamily KAB05_00408 PF13538 UvrD-like helicase C-terminal domain KAB05_00410 PF00312 Ribosomal protein S15 KAB05_00411 PF03725 3' exoribonuclease family, domain 2 KAB05_00411 PF00013 KH domain KAB05_00411 PF00575 S1 RNA binding domain KAB05_00411 PF01138 3' exoribonuclease family, domain 1 KAB05_00411 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAB05_00412 PF01544 CorA-like Mg2+ transporter protein KAB05_00414 PF01556 DnaJ C terminal domain KAB05_00414 PF00226 DnaJ domain KAB05_00416 PF01430 Hsp33 protein KAB05_00417 PF02254 TrkA-N domain KAB05_00417 PF00999 Sodium/hydrogen exchanger family KAB05_00418 PF00271 Helicase conserved C-terminal domain KAB05_00418 PF00270 DEAD/DEAH box helicase KAB05_00418 PF17764 3′ DNA-binding domain (3′BD) KAB05_00418 PF18074 Primosomal protein N C-terminal domain KAB05_00418 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAB05_00419 PF00482 Type II secretion system (T2SS), protein F KAB05_00420 PF08334 Type II secretion system (T2SS), protein G KAB05_00420 PF07963 Prokaryotic N-terminal methylation motif KAB05_00422 PF01588 Putative tRNA binding domain KAB05_00423 PF00795 Carbon-nitrogen hydrolase KAB05_00424 PF00571 CBS domain KAB05_00424 PF03471 Transporter associated domain KAB05_00425 PF01206 Sulfurtransferase TusA KAB05_00428 PF01177 Asp/Glu/Hydantoin racemase KAB05_00430 PF00762 Ferrochelatase KAB05_00431 PF00753 Metallo-beta-lactamase superfamily KAB05_00432 PF03884 DNA gyrase inhibitor YacG KAB05_00436 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KAB05_00438 PF01197 Ribosomal protein L31 KAB05_00439 PF03109 ABC1 family KAB05_00440 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB05_00440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_00441 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_00441 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB05_00441 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_00442 PF01554 MatE KAB05_00444 PF04055 Radical SAM superfamily KAB05_00444 PF06969 HemN C-terminal domain KAB05_00445 PF00106 short chain dehydrogenase KAB05_00446 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00446 PF03466 LysR substrate binding domain KAB05_00449 PF13193 AMP-binding enzyme C-terminal domain KAB05_00449 PF00501 AMP-binding enzyme KAB05_00450 PF10150 Ribonuclease E/G family KAB05_00450 PF00575 S1 RNA binding domain KAB05_00450 PF12111 Polyribonucleotide phosphorylase C terminal KAB05_00451 PF00849 RNA pseudouridylate synthase KAB05_00451 PF01479 S4 domain KAB05_00452 PF13419 Haloacid dehalogenase-like hydrolase KAB05_00453 PF13280 WYL domain KAB05_00453 PF08279 HTH domain KAB05_00454 PF02798 Glutathione S-transferase, N-terminal domain KAB05_00456 PF03466 LysR substrate binding domain KAB05_00456 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00457 PF12706 Beta-lactamase superfamily domain KAB05_00458 PF00141 Peroxidase KAB05_00459 PF02896 PEP-utilising enzyme, TIM barrel domain KAB05_00459 PF00391 PEP-utilising enzyme, mobile domain KAB05_00459 PF05524 PEP-utilising enzyme, N-terminal KAB05_00459 PF01590 GAF domain KAB05_00460 PF00293 NUDIX domain KAB05_00464 PF03466 LysR substrate binding domain KAB05_00464 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00466 PF00330 Aconitase family (aconitate hydratase) KAB05_00467 PF00694 Aconitase C-terminal domain KAB05_00469 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB05_00472 PF01176 Translation initiation factor 1A / IF-1 KAB05_00474 PF01416 tRNA pseudouridine synthase KAB05_00478 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB05_00478 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB05_00480 PF00375 Sodium:dicarboxylate symporter family KAB05_00482 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB05_00483 PF01810 LysE type translocator KAB05_00486 PF00107 Zinc-binding dehydrogenase KAB05_00486 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_00487 PF01638 HxlR-like helix-turn-helix KAB05_00489 PF01396 Topoisomerase DNA binding C4 zinc finger KAB05_00489 PF01751 Toprim domain KAB05_00489 PF01131 DNA topoisomerase KAB05_00489 PF08272 Topoisomerase I zinc-ribbon-like KAB05_00492 PF00580 UvrD/REP helicase N-terminal domain KAB05_00492 PF13361 UvrD-like helicase C-terminal domain KAB05_00493 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KAB05_00497 PF02254 TrkA-N domain KAB05_00497 PF00999 Sodium/hydrogen exchanger family KAB05_00498 PF00471 Ribosomal protein L33 KAB05_00499 PF00830 Ribosomal L28 family KAB05_00500 PF00171 Aldehyde dehydrogenase family KAB05_00502 PF00551 Formyl transferase KAB05_00502 PF01842 ACT domain KAB05_00504 PF01618 MotA/TolQ/ExbB proton channel family KAB05_00506 PF01625 Peptide methionine sulfoxide reductase KAB05_00508 PF00186 Dihydrofolate reductase KAB05_00509 PF00303 Thymidylate synthase KAB05_00512 PF01790 Prolipoprotein diacylglyceryl transferase KAB05_00516 PF00902 Sec-independent protein translocase protein (TatC) KAB05_00517 PF02416 mttA/Hcf106 family KAB05_00518 PF02416 mttA/Hcf106 family KAB05_00520 PF01725 Ham1 family KAB05_00522 PF00561 alpha/beta hydrolase fold KAB05_00522 PF07021 Methionine biosynthesis protein MetW KAB05_00523 PF00561 alpha/beta hydrolase fold KAB05_00524 PF08502 LeuA allosteric (dimerisation) domain KAB05_00524 PF00682 HMGL-like KAB05_00525 PF13640 2OG-Fe(II) oxygenase superfamily KAB05_00525 PF18331 PKHD-type hydroxylase C-terminal domain KAB05_00526 PF07715 TonB-dependent Receptor Plug Domain KAB05_00526 PF00593 TonB dependent receptor KAB05_00527 PF00593 TonB dependent receptor KAB05_00527 PF07715 TonB-dependent Receptor Plug Domain KAB05_00528 PF05698 Bacterial trigger factor protein (TF) C-terminus KAB05_00528 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB05_00528 PF05697 Bacterial trigger factor protein (TF) KAB05_00529 PF00574 Clp protease KAB05_00530 PF07724 AAA domain (Cdc48 subfamily) KAB05_00530 PF06689 ClpX C4-type zinc finger KAB05_00530 PF10431 C-terminal, D2-small domain, of ClpB protein KAB05_00533 PF05681 Fumarate hydratase (Fumerase) KAB05_00533 PF05683 Fumarase C-terminus KAB05_00534 PF01515 Phosphate acetyl/butaryl transferase KAB05_00534 PF07085 DRTGG domain KAB05_00535 PF00871 Acetokinase family KAB05_00536 PF00920 Dehydratase family KAB05_00537 PF01081 KDPG and KHG aldolase KAB05_00538 PF02447 GntP family permease KAB05_00539 PF01202 Shikimate kinase KAB05_00540 PF00171 Aldehyde dehydrogenase family KAB05_00541 PF00171 Aldehyde dehydrogenase family KAB05_00542 PF00561 alpha/beta hydrolase fold KAB05_00545 PF00933 Glycosyl hydrolase family 3 N terminal domain KAB05_00546 PF00595 PDZ domain KAB05_00546 PF11818 C-terminal domain of tail specific protease (DUF3340) KAB05_00546 PF17804 Tail specific protease N-terminal domain KAB05_00546 PF03572 Peptidase family S41 KAB05_00547 PF00534 Glycosyl transferases group 1 KAB05_00547 PF13439 Glycosyltransferase Family 4 KAB05_00548 PF01569 PAP2 superfamily KAB05_00549 PF04384 Iron-sulphur cluster assembly KAB05_00550 PF00334 Nucleoside diphosphate kinase KAB05_00551 PF04055 Radical SAM superfamily KAB05_00553 PF13464 Domain of unknown function (DUF4115) KAB05_00554 PF04551 GcpE protein KAB05_00555 PF03129 Anticodon binding domain KAB05_00555 PF13393 Histidyl-tRNA synthetase KAB05_00557 PF13360 PQQ-like domain KAB05_00558 PF01926 50S ribosome-binding GTPase KAB05_00558 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAB05_00561 PF00550 Phosphopantetheine attachment site KAB05_00562 PF00550 Phosphopantetheine attachment site KAB05_00564 PF00501 AMP-binding enzyme KAB05_00564 PF13193 AMP-binding enzyme C-terminal domain KAB05_00567 PF00221 Aromatic amino acid lyase KAB05_00571 PF04820 Tryptophan halogenase KAB05_00573 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB05_00573 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB05_00576 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB05_00576 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB05_00579 PF02556 Preprotein translocase subunit SecB KAB05_00580 PF00462 Glutaredoxin KAB05_00582 PF03193 RsgA GTPase KAB05_00583 PF00929 Exonuclease KAB05_00586 PF02321 Outer membrane efflux protein KAB05_00587 PF02687 FtsX-like permease family KAB05_00587 PF00005 ABC transporter KAB05_00587 PF12704 MacB-like periplasmic core domain KAB05_00588 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_00591 PF13603 Leucyl-tRNA synthetase, Domain 2 KAB05_00591 PF09334 tRNA synthetases class I (M) KAB05_00591 PF00133 tRNA synthetases class I (I, L, M and V) KAB05_00591 PF08264 Anticodon-binding domain of tRNA KAB05_00593 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB05_00593 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB05_00593 PF00205 Thiamine pyrophosphate enzyme, central domain KAB05_00594 PF10369 Small subunit of acetolactate synthase KAB05_00595 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAB05_00595 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAB05_00596 PF00990 Diguanylate cyclase, GGDEF domain KAB05_00596 PF03707 Bacterial signalling protein N terminal repeat KAB05_00596 PF00563 EAL domain KAB05_00600 PF16658 Class II release factor RF3, C-terminal domain KAB05_00600 PF03144 Elongation factor Tu domain 2 KAB05_00600 PF00009 Elongation factor Tu GTP binding domain KAB05_00603 PF01026 TatD related DNase KAB05_00604 PF00694 Aconitase C-terminal domain KAB05_00604 PF00330 Aconitase family (aconitate hydratase) KAB05_00605 PF00330 Aconitase family (aconitate hydratase) KAB05_00605 PF00694 Aconitase C-terminal domain KAB05_00607 PF00899 ThiF family KAB05_00608 PF03466 LysR substrate binding domain KAB05_00608 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00610 PF01207 Dihydrouridine synthase (Dus) KAB05_00611 PF07690 Major Facilitator Superfamily KAB05_00613 PF00892 EamA-like transporter family KAB05_00614 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAB05_00614 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAB05_00615 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KAB05_00616 PF02233 NAD(P) transhydrogenase beta subunit KAB05_00617 PF00106 short chain dehydrogenase KAB05_00619 PF01261 Xylose isomerase-like TIM barrel KAB05_00620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB05_00620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB05_00621 PF00378 Enoyl-CoA hydratase/isomerase KAB05_00622 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAB05_00622 PF00072 Response regulator receiver domain KAB05_00622 PF00672 HAMP domain KAB05_00622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00622 PF01627 Hpt domain KAB05_00622 PF00512 His Kinase A (phospho-acceptor) domain KAB05_00623 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_00625 PF05958 tRNA (Uracil-5-)-methyltransferase KAB05_00626 PF04607 Region found in RelA / SpoT proteins KAB05_00626 PF13291 ACT domain KAB05_00626 PF02824 TGS domain KAB05_00628 PF03819 MazG nucleotide pyrophosphohydrolase domain KAB05_00630 PF12626 Polymerase A arginine-rich C-terminus KAB05_00630 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB05_00630 PF01743 Poly A polymerase head domain KAB05_00631 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAB05_00633 PF02548 Ketopantoate hydroxymethyltransferase KAB05_00634 PF02569 Pantoate-beta-alanine ligase KAB05_00635 PF03668 P-loop ATPase protein family KAB05_00636 PF00381 PTS HPr component phosphorylation site KAB05_00637 PF04751 Protein of unknown function (DUF615) KAB05_00638 PF13193 AMP-binding enzyme C-terminal domain KAB05_00638 PF00501 AMP-binding enzyme KAB05_00639 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB05_00639 PF02824 TGS domain KAB05_00639 PF03129 Anticodon binding domain KAB05_00639 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB05_00640 PF05198 Translation initiation factor IF-3, N-terminal domain KAB05_00640 PF00707 Translation initiation factor IF-3, C-terminal domain KAB05_00641 PF00043 Glutathione S-transferase, C-terminal domain KAB05_00641 PF02798 Glutathione S-transferase, N-terminal domain KAB05_00642 PF09335 SNARE associated Golgi protein KAB05_00643 PF07690 Major Facilitator Superfamily KAB05_00644 PF01632 Ribosomal protein L35 KAB05_00645 PF00453 Ribosomal protein L20 KAB05_00649 PF01409 tRNA synthetases class II core domain (F) KAB05_00649 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAB05_00650 PF03484 tRNA synthetase B5 domain KAB05_00650 PF01588 Putative tRNA binding domain KAB05_00650 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAB05_00650 PF03483 B3/4 domain KAB05_00650 PF03147 Ferredoxin-fold anticodon binding domain KAB05_00651 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAB05_00651 PF03483 B3/4 domain KAB05_00651 PF03484 tRNA synthetase B5 domain KAB05_00651 PF01588 Putative tRNA binding domain KAB05_00651 PF03147 Ferredoxin-fold anticodon binding domain KAB05_00652 PF00216 Bacterial DNA-binding protein KAB05_00654 PF07497 Rho termination factor, RNA-binding domain KAB05_00654 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB05_00654 PF07498 Rho termination factor, N-terminal domain KAB05_00655 PF00085 Thioredoxin KAB05_00656 PF02541 Ppx/GppA phosphatase family KAB05_00657 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KAB05_00658 PF11734 TilS substrate C-terminal domain KAB05_00658 PF09179 TilS substrate binding domain KAB05_00658 PF01171 PP-loop family KAB05_00659 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB05_00659 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB05_00660 PF02325 YGGT family KAB05_00661 PF01612 3'-5' exonuclease KAB05_00661 PF00476 DNA polymerase family A KAB05_00661 PF01367 5'-3' exonuclease, C-terminal SAM fold KAB05_00661 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAB05_00665 PF00437 Type II/IV secretion system protein KAB05_00666 PF02566 OsmC-like protein KAB05_00667 PF01047 MarR family KAB05_00669 PF00795 Carbon-nitrogen hydrolase KAB05_00678 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAB05_00678 PF04963 Sigma-54 factor, core binding domain KAB05_00678 PF04552 Sigma-54, DNA binding domain KAB05_00679 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAB05_00680 PF01722 BolA-like protein KAB05_00681 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB05_00682 PF01634 ATP phosphoribosyltransferase KAB05_00683 PF00815 Histidinol dehydrogenase KAB05_00684 PF00155 Aminotransferase class I and II KAB05_00685 PF00425 chorismate binding enzyme KAB05_00685 PF04715 Anthranilate synthase component I, N terminal region KAB05_00694 PF00293 NUDIX domain KAB05_00695 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_00696 PF00814 Glycoprotease family KAB05_00697 PF04445 Putative SAM-dependent methyltransferase KAB05_00699 PF00756 Putative esterase KAB05_00701 PF00834 Ribulose-phosphate 3 epimerase family KAB05_00704 PF00394 Multicopper oxidase KAB05_00704 PF07732 Multicopper oxidase KAB05_00704 PF07731 Multicopper oxidase KAB05_00705 PF05275 Copper resistance protein B precursor (CopB) KAB05_00707 PF00893 Small Multidrug Resistance protein KAB05_00708 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB05_00708 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB05_00709 PF01960 ArgJ family KAB05_00710 PF02445 Quinolinate synthetase A protein KAB05_00715 PF00962 Adenosine/AMP deaminase KAB05_00716 PF00107 Zinc-binding dehydrogenase KAB05_00716 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_00717 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00717 PF03466 LysR substrate binding domain KAB05_00718 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_00718 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_00718 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_00719 PF07690 Major Facilitator Superfamily KAB05_00720 PF02515 CoA-transferase family III KAB05_00722 PF00890 FAD binding domain KAB05_00722 PF03358 NADPH-dependent FMN reductase KAB05_00722 PF04205 FMN-binding domain KAB05_00723 PF00890 FAD binding domain KAB05_00723 PF14537 Cytochrome c3 KAB05_00724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00724 PF03466 LysR substrate binding domain KAB05_00727 PF07690 Major Facilitator Superfamily KAB05_00728 PF03466 LysR substrate binding domain KAB05_00728 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00730 PF07687 Peptidase dimerisation domain KAB05_00730 PF01546 Peptidase family M20/M25/M40 KAB05_00731 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB05_00731 PF12833 Helix-turn-helix domain KAB05_00733 PF01810 LysE type translocator KAB05_00734 PF03466 LysR substrate binding domain KAB05_00734 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00736 PF08267 Cobalamin-independent synthase, N-terminal domain KAB05_00736 PF01717 Cobalamin-independent synthase, Catalytic domain KAB05_00737 PF01613 Flavin reductase like domain KAB05_00740 PF00905 Penicillin binding protein transpeptidase domain KAB05_00743 PF13614 AAA domain KAB05_00744 PF10544 T5orf172 domain KAB05_00753 PF02567 Phenazine biosynthesis-like protein KAB05_00758 PF01011 PQQ enzyme repeat KAB05_00758 PF13360 PQQ-like domain KAB05_00772 PF00672 HAMP domain KAB05_00772 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00772 PF00512 His Kinase A (phospho-acceptor) domain KAB05_00772 PF13755 Sensor N-terminal transmembrane domain KAB05_00772 PF13756 Stimulus-sensing domain KAB05_00773 PF00268 Ribonucleotide reductase, small chain KAB05_00775 PF02867 Ribonucleotide reductase, barrel domain KAB05_00775 PF03477 ATP cone domain KAB05_00775 PF00317 Ribonucleotide reductase, all-alpha domain KAB05_00776 PF00486 Transcriptional regulatory protein, C terminal KAB05_00776 PF00072 Response regulator receiver domain KAB05_00777 PF00512 His Kinase A (phospho-acceptor) domain KAB05_00777 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_00777 PF00672 HAMP domain KAB05_00779 PF17151 Periplasmic sensor domain KAB05_00779 PF00990 Diguanylate cyclase, GGDEF domain KAB05_00780 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KAB05_00781 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAB05_00782 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KAB05_00782 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAB05_00784 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAB05_00784 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB05_00784 PF10531 SLBB domain KAB05_00785 PF00384 Molybdopterin oxidoreductase KAB05_00785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB05_00785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB05_00786 PF00146 NADH dehydrogenase KAB05_00787 PF12838 4Fe-4S dicluster domain KAB05_00788 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KAB05_00789 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB05_00790 PF00361 Proton-conducting membrane transporter KAB05_00790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB05_00791 PF00361 Proton-conducting membrane transporter KAB05_00792 PF00361 Proton-conducting membrane transporter KAB05_00794 PF00313 'Cold-shock' DNA-binding domain KAB05_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00795 PF03466 LysR substrate binding domain KAB05_00796 PF00175 Oxidoreductase NAD-binding domain KAB05_00796 PF00970 Oxidoreductase FAD-binding domain KAB05_00797 PF00175 Oxidoreductase NAD-binding domain KAB05_00797 PF00970 Oxidoreductase FAD-binding domain KAB05_00800 PF05552 Conserved TM helix KAB05_00803 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_00804 PF13533 Biotin-lipoyl like KAB05_00809 PF09334 tRNA synthetases class I (M) KAB05_00809 PF01588 Putative tRNA binding domain KAB05_00811 PF10609 NUBPL iron-transfer P-loop NTPase KAB05_00812 PF01048 Phosphorylase superfamily KAB05_00815 PF00692 dUTPase KAB05_00821 PF01207 Dihydrouridine synthase (Dus) KAB05_00823 PF02881 SRP54-type protein, helical bundle domain KAB05_00823 PF00448 SRP54-type protein, GTPase domain KAB05_00823 PF02978 Signal peptide binding domain KAB05_00824 PF03309 Type III pantothenate kinase KAB05_00826 PF01925 Sulfite exporter TauE/SafE KAB05_00828 PF02463 RecF/RecN/SMC N terminal domain KAB05_00828 PF06470 SMC proteins Flexible Hinge Domain KAB05_00830 PF00533 BRCA1 C Terminus (BRCT) domain KAB05_00830 PF01653 NAD-dependent DNA ligase adenylation domain KAB05_00830 PF03120 NAD-dependent DNA ligase OB-fold domain KAB05_00830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAB05_00830 PF12826 Helix-hairpin-helix motif KAB05_00831 PF00210 Ferritin-like domain KAB05_00832 PF07690 Major Facilitator Superfamily KAB05_00833 PF00982 Glycosyltransferase family 20 KAB05_00834 PF02358 Trehalose-phosphatase KAB05_00835 PF08241 Methyltransferase domain KAB05_00835 PF12697 Alpha/beta hydrolase family KAB05_00836 PF06968 Biotin and Thiamin Synthesis associated domain KAB05_00836 PF00202 Aminotransferase class-III KAB05_00836 PF04055 Radical SAM superfamily KAB05_00837 PF00155 Aminotransferase class I and II KAB05_00840 PF00849 RNA pseudouridylate synthase KAB05_00840 PF01479 S4 domain KAB05_00841 PF04079 Segregation and condensation complex subunit ScpB KAB05_00842 PF02616 Segregation and condensation protein ScpA KAB05_00843 PF01300 Telomere recombination KAB05_00844 PF04315 Elongation factor P hydroxylase KAB05_00845 PF02620 Large ribosomal RNA subunit accumulation protein YceD KAB05_00846 PF01783 Ribosomal L32p protein family KAB05_00847 PF00698 Acyl transferase domain KAB05_00849 PF00550 Phosphopantetheine attachment site KAB05_00850 PF04972 BON domain KAB05_00850 PF01476 LysM domain KAB05_00851 PF02581 Thiamine monophosphate synthase KAB05_00851 PF03070 TENA/THI-4/PQQC family KAB05_00851 PF08543 Phosphomethylpyrimidine kinase KAB05_00853 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB05_00856 PF02261 Aspartate decarboxylase KAB05_00857 PF01195 Peptidyl-tRNA hydrolase KAB05_00858 PF01386 Ribosomal L25p family KAB05_00859 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB05_00859 PF14572 Phosphoribosyl synthetase-associated domain KAB05_00866 PF01488 Shikimate / quinate 5-dehydrogenase KAB05_00866 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAB05_00866 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAB05_00867 PF01807 CHC2 zinc finger KAB05_00867 PF08275 DNA primase catalytic core, N-terminal domain KAB05_00867 PF08278 DNA primase DnaG DnaB-binding KAB05_00867 PF10410 DnaB-helicase binding domain of primase KAB05_00868 PF13525 Outer membrane lipoprotein KAB05_00869 PF00849 RNA pseudouridylate synthase KAB05_00869 PF01479 S4 domain KAB05_00871 PF03358 NADPH-dependent FMN reductase KAB05_00872 PF01668 SmpB protein KAB05_00873 PF01467 Cytidylyltransferase-like KAB05_00874 PF00037 4Fe-4S binding domain KAB05_00877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_00877 PF03466 LysR substrate binding domain KAB05_00878 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB05_00879 PF02028 BCCT, betaine/carnitine/choline family transporter KAB05_00880 PF07859 alpha/beta hydrolase fold KAB05_00881 PF00355 Rieske [2Fe-2S] domain KAB05_00881 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB05_00882 PF00171 Aldehyde dehydrogenase family KAB05_00883 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_00883 PF00175 Oxidoreductase NAD-binding domain KAB05_00883 PF00970 Oxidoreductase FAD-binding domain KAB05_00884 PF00175 Oxidoreductase NAD-binding domain KAB05_00884 PF00970 Oxidoreductase FAD-binding domain KAB05_00884 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_00887 PF00795 Carbon-nitrogen hydrolase KAB05_00887 PF02540 NAD synthase KAB05_00889 PF05726 Pirin C-terminal cupin domain KAB05_00889 PF02678 Pirin KAB05_00891 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB05_00891 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB05_00893 PF00164 Ribosomal protein S12/S23 KAB05_00894 PF00177 Ribosomal protein S7p/S5e KAB05_00895 PF00679 Elongation factor G C-terminus KAB05_00895 PF14492 Elongation Factor G, domain II KAB05_00895 PF03144 Elongation factor Tu domain 2 KAB05_00895 PF03764 Elongation factor G, domain IV KAB05_00895 PF00009 Elongation factor Tu GTP binding domain KAB05_00896 PF03144 Elongation factor Tu domain 2 KAB05_00896 PF03143 Elongation factor Tu C-terminal domain KAB05_00896 PF00009 Elongation factor Tu GTP binding domain KAB05_00899 PF00583 Acetyltransferase (GNAT) family KAB05_00900 PF04377 Arginine-tRNA-protein transferase, C terminus KAB05_00900 PF04376 Arginine-tRNA-protein transferase, N terminus KAB05_00901 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KAB05_00902 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_00903 PF01580 FtsK/SpoIIIE family KAB05_00903 PF09397 Ftsk gamma domain KAB05_00903 PF17854 FtsK alpha domain KAB05_00903 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAB05_00904 PF01810 LysE type translocator KAB05_00908 PF03776 Septum formation topological specificity factor MinE KAB05_00909 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAB05_00910 PF03775 Septum formation inhibitor MinC, C-terminal domain KAB05_00912 PF01553 Acyltransferase KAB05_00913 PF00691 OmpA family KAB05_00913 PF13488 Glycine zipper KAB05_00915 PF13361 UvrD-like helicase C-terminal domain KAB05_00915 PF00580 UvrD/REP helicase N-terminal domain KAB05_00916 PF00692 dUTPase KAB05_00917 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB05_00917 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB05_00917 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB05_00917 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB05_00918 PF00696 Amino acid kinase family KAB05_00920 PF13230 Glutamine amidotransferases class-II KAB05_00921 PF01814 Hemerythrin HHE cation binding domain KAB05_00923 PF03658 RnfH family Ubiquitin KAB05_00924 PF04355 SmpA / OmlA family KAB05_00925 PF01475 Ferric uptake regulator family KAB05_00926 PF00437 Type II/IV secretion system protein KAB05_00927 PF00437 Type II/IV secretion system protein KAB05_00928 PF01168 Alanine racemase, N-terminal domain KAB05_00930 PF12320 Type 5 capsule protein repressor C-terminal domain KAB05_00930 PF00149 Calcineurin-like phosphoesterase KAB05_00934 PF08338 Domain of unknown function (DUF1731) KAB05_00934 PF01370 NAD dependent epimerase/dehydratase family KAB05_00935 PF01266 FAD dependent oxidoreductase KAB05_00936 PF00490 Delta-aminolevulinic acid dehydratase KAB05_00937 PF03061 Thioesterase superfamily KAB05_00938 PF13533 Biotin-lipoyl like KAB05_00939 PF07690 Major Facilitator Superfamily KAB05_00943 PF13737 Transposase DDE domain KAB05_00948 PF00929 Exonuclease KAB05_00962 PF00145 C-5 cytosine-specific DNA methylase KAB05_00963 PF01555 DNA methylase KAB05_00969 PF01555 DNA methylase KAB05_00971 PF01695 IstB-like ATP binding protein KAB05_01011 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KAB05_01019 PF02767 DNA polymerase III beta subunit, central domain KAB05_01019 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB05_01019 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB05_01046 PF00083 Sugar (and other) transporter KAB05_01047 PF00701 Dihydrodipicolinate synthetase family KAB05_01049 PF04542 Sigma-70 region 2 KAB05_01049 PF08281 Sigma-70, region 4 KAB05_01051 PF07715 TonB-dependent Receptor Plug Domain KAB05_01051 PF00593 TonB dependent receptor KAB05_01055 PF01126 Heme oxygenase KAB05_01060 PF13520 Amino acid permease KAB05_01061 PF02574 Homocysteine S-methyltransferase KAB05_01063 PF06039 Malate:quinone oxidoreductase (Mqo) KAB05_01064 PF05199 GMC oxidoreductase KAB05_01064 PF00732 GMC oxidoreductase KAB05_01065 PF00171 Aldehyde dehydrogenase family KAB05_01066 PF00440 Bacterial regulatory proteins, tetR family KAB05_01066 PF13977 BetI-type transcriptional repressor, C-terminal KAB05_01067 PF02028 BCCT, betaine/carnitine/choline family transporter KAB05_01068 PF02028 BCCT, betaine/carnitine/choline family transporter KAB05_01070 PF03061 Thioesterase superfamily KAB05_01072 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB05_01072 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB05_01073 PF00375 Sodium:dicarboxylate symporter family KAB05_01074 PF07152 YaeQ protein KAB05_01075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB05_01076 PF14883 Hypothetical glycosyl hydrolase family 13 KAB05_01076 PF01522 Polysaccharide deacetylase KAB05_01077 PF00535 Glycosyl transferase family 2 KAB05_01079 PF00378 Enoyl-CoA hydratase/isomerase KAB05_01082 PF09339 IclR helix-turn-helix domain KAB05_01082 PF01614 Bacterial transcriptional regulator KAB05_01083 PF00355 Rieske [2Fe-2S] domain KAB05_01085 PF00355 Rieske [2Fe-2S] domain KAB05_01087 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB05_01088 PF14759 Reductase C-terminal KAB05_01088 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01089 PF07690 Major Facilitator Superfamily KAB05_01091 PF12697 Alpha/beta hydrolase family KAB05_01093 PF03447 Homoserine dehydrogenase, NAD binding domain KAB05_01093 PF01958 Domain of unknown function DUF108 KAB05_01094 PF00171 Aldehyde dehydrogenase family KAB05_01095 PF00205 Thiamine pyrophosphate enzyme, central domain KAB05_01095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB05_01095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB05_01097 PF07690 Major Facilitator Superfamily KAB05_01099 PF01327 Polypeptide deformylase KAB05_01100 PF04960 Glutaminase KAB05_01101 PF02311 AraC-like ligand binding domain KAB05_01101 PF12833 Helix-turn-helix domain KAB05_01102 PF07690 Major Facilitator Superfamily KAB05_01103 PF01263 Aldose 1-epimerase KAB05_01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01105 PF03466 LysR substrate binding domain KAB05_01107 PF07690 Major Facilitator Superfamily KAB05_01108 PF00456 Transketolase, thiamine diphosphate binding domain KAB05_01109 PF02779 Transketolase, pyrimidine binding domain KAB05_01109 PF02780 Transketolase, C-terminal domain KAB05_01110 PF00809 Pterin binding enzyme KAB05_01110 PF02607 B12 binding domain KAB05_01110 PF02310 B12 binding domain KAB05_01110 PF02574 Homocysteine S-methyltransferase KAB05_01110 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAB05_01111 PF01384 Phosphate transporter family KAB05_01112 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_01115 PF03781 Sulfatase-modifying factor enzyme 1 KAB05_01116 PF00884 Sulfatase KAB05_01118 PF01521 Iron-sulphur cluster biosynthesis KAB05_01118 PF01106 NifU-like domain KAB05_01119 PF07715 TonB-dependent Receptor Plug Domain KAB05_01119 PF00593 TonB dependent receptor KAB05_01121 PF00561 alpha/beta hydrolase fold KAB05_01122 PF00484 Carbonic anhydrase KAB05_01123 PF13472 GDSL-like Lipase/Acylhydrolase family KAB05_01124 PF00005 ABC transporter KAB05_01126 PF01694 Rhomboid family KAB05_01127 PF00912 Transglycosylase KAB05_01128 PF02503 Polyphosphate kinase middle domain KAB05_01128 PF13090 Polyphosphate kinase C-terminal domain 2 KAB05_01128 PF13089 Polyphosphate kinase N-terminal domain KAB05_01128 PF17941 Polyphosphate kinase C-terminal domain 1 KAB05_01130 PF03466 LysR substrate binding domain KAB05_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01131 PF00561 alpha/beta hydrolase fold KAB05_01132 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01132 PF18113 Rubredoxin binding C-terminal domain KAB05_01133 PF00301 Rubredoxin KAB05_01136 PF01336 OB-fold nucleic acid binding domain KAB05_01136 PF00152 tRNA synthetases class II (D, K and N) KAB05_01137 PF14052 Capsule assembly protein Wzi KAB05_01139 PF01507 Phosphoadenosine phosphosulfate reductase family KAB05_01140 PF00009 Elongation factor Tu GTP binding domain KAB05_01143 PF03600 Citrate transporter KAB05_01144 PF00571 CBS domain KAB05_01144 PF03471 Transporter associated domain KAB05_01144 PF01595 Cyclin M transmembrane N-terminal domain KAB05_01145 PF03466 LysR substrate binding domain KAB05_01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01146 PF00463 Isocitrate lyase family KAB05_01149 PF01774 UreD urease accessory protein KAB05_01150 PF00547 Urease, gamma subunit KAB05_01151 PF00699 Urease beta subunit KAB05_01152 PF00449 Urease alpha-subunit, N-terminal domain KAB05_01152 PF01979 Amidohydrolase family KAB05_01153 PF00449 Urease alpha-subunit, N-terminal domain KAB05_01153 PF01979 Amidohydrolase family KAB05_01154 PF05194 UreE urease accessory protein, C-terminal domain KAB05_01154 PF02814 UreE urease accessory protein, N-terminal domain KAB05_01155 PF01730 UreF KAB05_01156 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB05_01159 PF00905 Penicillin binding protein transpeptidase domain KAB05_01159 PF03717 Penicillin-binding Protein dimerisation domain KAB05_01162 PF05191 Adenylate kinase, active site lid KAB05_01163 PF00633 Helix-hairpin-helix motif KAB05_01163 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB05_01163 PF10576 Iron-sulfur binding domain of endonuclease III KAB05_01164 PF04060 Putative Fe-S cluster KAB05_01165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB05_01165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB05_01167 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAB05_01168 PF02590 Predicted SPOUT methyltransferase KAB05_01169 PF00004 ATPase family associated with various cellular activities (AAA) KAB05_01169 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAB05_01169 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB05_01170 PF13018 Extended Signal Peptide of Type V secretion system KAB05_01170 PF03895 YadA-like membrane anchor domain KAB05_01170 PF05658 Head domain of trimeric autotransporter adhesin KAB05_01170 PF05662 Coiled stalk of trimeric autotransporter adhesin KAB05_01171 PF13018 Extended Signal Peptide of Type V secretion system KAB05_01171 PF03895 YadA-like membrane anchor domain KAB05_01171 PF05658 Head domain of trimeric autotransporter adhesin KAB05_01171 PF05662 Coiled stalk of trimeric autotransporter adhesin KAB05_01173 PF01812 5-formyltetrahydrofolate cyclo-ligase family KAB05_01239 PF01476 LysM domain KAB05_01239 PF08525 Opacity-associated protein A N-terminal motif KAB05_01239 PF01551 Peptidase family M23 KAB05_01248 PF00884 Sulfatase KAB05_01248 PF08019 Phosphoethanolamine transferase EptA/EptB KAB05_01255 PF00557 Metallopeptidase family M24 KAB05_01255 PF05195 Aminopeptidase P, N-terminal domain KAB05_01256 PF01494 FAD binding domain KAB05_01257 PF01494 FAD binding domain KAB05_01259 PF13411 MerR HTH family regulatory protein KAB05_01261 PF01810 LysE type translocator KAB05_01262 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01262 PF03466 LysR substrate binding domain KAB05_01264 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB05_01265 PF02021 Uncharacterised protein family UPF0102 KAB05_01266 PF04972 BON domain KAB05_01268 PF09297 NADH pyrophosphatase zinc ribbon domain KAB05_01268 PF00293 NUDIX domain KAB05_01270 PF00929 Exonuclease KAB05_01271 PF01464 Transglycosylase SLT domain KAB05_01271 PF01476 LysM domain KAB05_01271 PF01464 Transglycosylase SLT domain KAB05_01271 PF01476 LysM domain KAB05_01272 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAB05_01273 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01274 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01274 PF12911 N-terminal TM domain of oligopeptide transport permease C KAB05_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB05_01275 PF00005 ABC transporter KAB05_01276 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01276 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_01277 PF00593 TonB dependent receptor KAB05_01277 PF07715 TonB-dependent Receptor Plug Domain KAB05_01279 PF00929 Exonuclease KAB05_01280 PF01979 Amidohydrolase family KAB05_01281 PF00990 Diguanylate cyclase, GGDEF domain KAB05_01281 PF01590 GAF domain KAB05_01281 PF00563 EAL domain KAB05_01281 PF00360 Phytochrome region KAB05_01282 PF00764 Arginosuccinate synthase KAB05_01283 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01283 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_01286 PF05987 Bacterial protein of unknown function (DUF898) KAB05_01287 PF03180 NLPA lipoprotein KAB05_01290 PF16671 Actin cross-linking domain KAB05_01290 PF04717 Type VI secretion system, phage-baseplate injector KAB05_01292 PF05593 RHS Repeat KAB05_01292 PF03527 RHS protein KAB05_01293 PF13610 DDE domain KAB05_01294 PF00743 Flavin-binding monooxygenase-like KAB05_01295 PF00106 short chain dehydrogenase KAB05_01297 PF00440 Bacterial regulatory proteins, tetR family KAB05_01297 PF17932 Tetracyclin repressor-like, C-terminal domain KAB05_01298 PF17954 Quercetinase C-terminal cupin domain KAB05_01298 PF02678 Pirin KAB05_01300 PF00106 short chain dehydrogenase KAB05_01301 PF00743 Flavin-binding monooxygenase-like KAB05_01303 PF00860 Permease family KAB05_01304 PF00962 Adenosine/AMP deaminase KAB05_01305 PF01292 Prokaryotic cytochrome b561 KAB05_01307 PF01351 Ribonuclease HII KAB05_01308 PF02599 Global regulator protein family KAB05_01309 PF13840 ACT domain KAB05_01309 PF00696 Amino acid kinase family KAB05_01309 PF01842 ACT domain KAB05_01310 PF01411 tRNA synthetases class II (A) KAB05_01310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB05_01310 PF02272 DHHA1 domain KAB05_01311 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB05_01311 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB05_01312 PF13393 Histidyl-tRNA synthetase KAB05_01313 PF00709 Adenylosuccinate synthetase KAB05_01316 PF00248 Aldo/keto reductase family KAB05_01319 PF13545 Crp-like helix-turn-helix domain KAB05_01319 PF00027 Cyclic nucleotide-binding domain KAB05_01320 PF02566 OsmC-like protein KAB05_01323 PF02861 Clp amino terminal domain, pathogenicity island component KAB05_01323 PF17871 AAA lid domain KAB05_01323 PF07724 AAA domain (Cdc48 subfamily) KAB05_01323 PF00004 ATPase family associated with various cellular activities (AAA) KAB05_01323 PF10431 C-terminal, D2-small domain, of ClpB protein KAB05_01326 PF01170 Putative RNA methylase family UPF0020 KAB05_01326 PF02926 THUMP domain KAB05_01326 PF10672 S-adenosylmethionine-dependent methyltransferase KAB05_01328 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB05_01328 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB05_01329 PF01979 Amidohydrolase family KAB05_01330 PF13488 Glycine zipper KAB05_01330 PF00691 OmpA family KAB05_01332 PF00043 Glutathione S-transferase, C-terminal domain KAB05_01332 PF13417 Glutathione S-transferase, N-terminal domain KAB05_01333 PF02390 Putative methyltransferase KAB05_01335 PF00043 Glutathione S-transferase, C-terminal domain KAB05_01335 PF02798 Glutathione S-transferase, N-terminal domain KAB05_01337 PF13192 Thioredoxin domain KAB05_01337 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01341 PF00578 AhpC/TSA family KAB05_01341 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB05_01342 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KAB05_01342 PF00271 Helicase conserved C-terminal domain KAB05_01342 PF04408 Helicase associated domain (HA2) KAB05_01342 PF11898 Domain of unknown function (DUF3418) KAB05_01342 PF00270 DEAD/DEAH box helicase KAB05_01343 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAB05_01343 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAB05_01345 PF07690 Major Facilitator Superfamily KAB05_01346 PF03594 Benzoate membrane transport protein KAB05_01347 PF03594 Benzoate membrane transport protein KAB05_01348 PF00106 short chain dehydrogenase KAB05_01349 PF00970 Oxidoreductase FAD-binding domain KAB05_01349 PF00175 Oxidoreductase NAD-binding domain KAB05_01349 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_01350 PF00866 Ring hydroxylating beta subunit KAB05_01351 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB05_01351 PF00355 Rieske [2Fe-2S] domain KAB05_01352 PF03466 LysR substrate binding domain KAB05_01352 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01354 PF00403 Heavy-metal-associated domain KAB05_01355 PF09278 MerR, DNA binding KAB05_01355 PF00376 MerR family regulatory protein KAB05_01363 PF13742 OB-fold nucleic acid binding domain KAB05_01363 PF02601 Exonuclease VII, large subunit KAB05_01370 PF01810 LysE type translocator KAB05_01371 PF00313 'Cold-shock' DNA-binding domain KAB05_01373 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB05_01373 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB05_01378 PF07690 Major Facilitator Superfamily KAB05_01379 PF07690 Major Facilitator Superfamily KAB05_01380 PF01638 HxlR-like helix-turn-helix KAB05_01387 PF01406 tRNA synthetases class I (C) catalytic domain KAB05_01387 PF09190 DALR domain KAB05_01388 PF00571 CBS domain KAB05_01388 PF01380 SIS domain KAB05_01391 PF03968 OstA-like protein KAB05_01392 PF00005 ABC transporter KAB05_01392 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAB05_01393 PF02321 Outer membrane efflux protein KAB05_01394 PF03412 Peptidase C39 family KAB05_01394 PF00005 ABC transporter KAB05_01394 PF00664 ABC transporter transmembrane region KAB05_01396 PF01205 Uncharacterized protein family UPF0029 KAB05_01397 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_01399 PF01596 O-methyltransferase KAB05_01401 PF11953 Domain of unknown function (DUF3470) KAB05_01401 PF00037 4Fe-4S binding domain KAB05_01403 PF05188 MutS domain II KAB05_01403 PF05192 MutS domain III KAB05_01403 PF05190 MutS family domain IV KAB05_01403 PF01624 MutS domain I KAB05_01403 PF00488 MutS domain V KAB05_01404 PF01037 Lrp/AsnC ligand binding domain KAB05_01405 PF00892 EamA-like transporter family KAB05_01406 PF00563 EAL domain KAB05_01406 PF03707 Bacterial signalling protein N terminal repeat KAB05_01406 PF00990 Diguanylate cyclase, GGDEF domain KAB05_01407 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB05_01409 PF07690 Major Facilitator Superfamily KAB05_01413 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB05_01413 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB05_01416 PF13419 Haloacid dehalogenase-like hydrolase KAB05_01418 PF04717 Type VI secretion system, phage-baseplate injector KAB05_01418 PF16671 Actin cross-linking domain KAB05_01419 PF05593 RHS Repeat KAB05_01419 PF14220 Domain of unknown function (DUF4329) KAB05_01419 PF03527 RHS protein KAB05_01422 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01422 PF03466 LysR substrate binding domain KAB05_01423 PF01566 Natural resistance-associated macrophage protein KAB05_01424 PF03746 LamB/YcsF family KAB05_01425 PF07286 Protein of unknown function (DUF1445) KAB05_01427 PF02785 Biotin carboxylase C-terminal domain KAB05_01427 PF00289 Biotin carboxylase, N-terminal domain KAB05_01427 PF00364 Biotin-requiring enzyme KAB05_01427 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB05_01428 PF00654 Voltage gated chloride channel KAB05_01433 PF00440 Bacterial regulatory proteins, tetR family KAB05_01435 PF00107 Zinc-binding dehydrogenase KAB05_01435 PF13823 Alcohol dehydrogenase GroES-associated KAB05_01435 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_01438 PF02785 Biotin carboxylase C-terminal domain KAB05_01438 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB05_01438 PF00289 Biotin carboxylase, N-terminal domain KAB05_01439 PF02525 Flavodoxin-like fold KAB05_01440 PF01638 HxlR-like helix-turn-helix KAB05_01443 PF01402 Ribbon-helix-helix protein, copG family KAB05_01443 PF08753 NikR C terminal nickel binding domain KAB05_01444 PF01425 Amidase KAB05_01445 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB05_01446 PF00005 ABC transporter KAB05_01451 PF00376 MerR family regulatory protein KAB05_01451 PF09278 MerR, DNA binding KAB05_01454 PF00701 Dihydrodipicolinate synthetase family KAB05_01456 PF00392 Bacterial regulatory proteins, gntR family KAB05_01457 PF05544 Proline racemase KAB05_01458 PF01266 FAD dependent oxidoreductase KAB05_01460 PF04324 BFD-like [2Fe-2S] binding domain KAB05_01460 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01462 PF00083 Sugar (and other) transporter KAB05_01463 PF00171 Aldehyde dehydrogenase family KAB05_01464 PF13520 Amino acid permease KAB05_01465 PF13520 Amino acid permease KAB05_01466 PF03313 Serine dehydratase alpha chain KAB05_01466 PF03315 Serine dehydratase beta chain KAB05_01467 PF00171 Aldehyde dehydrogenase family KAB05_01467 PF01575 MaoC like domain KAB05_01468 PF05138 Phenylacetic acid catabolic protein KAB05_01469 PF06243 Phenylacetic acid degradation B KAB05_01470 PF05138 Phenylacetic acid catabolic protein KAB05_01471 PF01883 Iron-sulfur cluster assembly protein KAB05_01472 PF00970 Oxidoreductase FAD-binding domain KAB05_01472 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_01472 PF00175 Oxidoreductase NAD-binding domain KAB05_01473 PF00378 Enoyl-CoA hydratase/isomerase KAB05_01474 PF00378 Enoyl-CoA hydratase/isomerase KAB05_01475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB05_01475 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB05_01475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB05_01476 PF00108 Thiolase, N-terminal domain KAB05_01476 PF02803 Thiolase, C-terminal domain KAB05_01477 PF14535 AMP-binding enzyme C-terminal domain KAB05_01477 PF00501 AMP-binding enzyme KAB05_01478 PF07848 PaaX-like protein KAB05_01478 PF08223 PaaX-like protein C-terminal domain KAB05_01479 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_01480 PF03061 Thioesterase superfamily KAB05_01487 PF00199 Catalase KAB05_01488 PF01292 Prokaryotic cytochrome b561 KAB05_01492 PF12697 Alpha/beta hydrolase family KAB05_01493 PF01613 Flavin reductase like domain KAB05_01494 PF00296 Luciferase-like monooxygenase KAB05_01495 PF00171 Aldehyde dehydrogenase family KAB05_01496 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB05_01498 PF00171 Aldehyde dehydrogenase family KAB05_01499 PF02627 Carboxymuconolactone decarboxylase family KAB05_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01500 PF03466 LysR substrate binding domain KAB05_01501 PF02525 Flavodoxin-like fold KAB05_01502 PF01614 Bacterial transcriptional regulator KAB05_01502 PF09339 IclR helix-turn-helix domain KAB05_01503 PF01494 FAD binding domain KAB05_01504 PF00392 Bacterial regulatory proteins, gntR family KAB05_01504 PF07702 UTRA domain KAB05_01506 PF00005 ABC transporter KAB05_01506 PF08402 TOBE domain KAB05_01507 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01508 PF01266 FAD dependent oxidoreductase KAB05_01509 PF00266 Aminotransferase class-V KAB05_01510 PF13419 Haloacid dehalogenase-like hydrolase KAB05_01511 PF07690 Major Facilitator Superfamily KAB05_01512 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01512 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01512 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01513 PF02515 CoA-transferase family III KAB05_01514 PF09339 IclR helix-turn-helix domain KAB05_01515 PF00378 Enoyl-CoA hydratase/isomerase KAB05_01516 PF03060 Nitronate monooxygenase KAB05_01517 PF07690 Major Facilitator Superfamily KAB05_01518 PF09339 IclR helix-turn-helix domain KAB05_01519 PF02803 Thiolase, C-terminal domain KAB05_01519 PF00108 Thiolase, N-terminal domain KAB05_01520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB05_01520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB05_01520 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB05_01522 PF00378 Enoyl-CoA hydratase/isomerase KAB05_01523 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01523 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01523 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01524 PF07690 Major Facilitator Superfamily KAB05_01525 PF01144 Coenzyme A transferase KAB05_01526 PF01144 Coenzyme A transferase KAB05_01528 PF07690 Major Facilitator Superfamily KAB05_01531 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01531 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB05_01531 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01531 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01534 PF03466 LysR substrate binding domain KAB05_01534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01535 PF00682 HMGL-like KAB05_01536 PF00364 Biotin-requiring enzyme KAB05_01536 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB05_01536 PF02785 Biotin carboxylase C-terminal domain KAB05_01536 PF00289 Biotin carboxylase, N-terminal domain KAB05_01537 PF00378 Enoyl-CoA hydratase/isomerase KAB05_01538 PF01039 Carboxyl transferase domain KAB05_01539 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01539 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01539 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01540 PF00440 Bacterial regulatory proteins, tetR family KAB05_01541 PF00501 AMP-binding enzyme KAB05_01541 PF13193 AMP-binding enzyme C-terminal domain KAB05_01545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01545 PF03466 LysR substrate binding domain KAB05_01553 PF02464 Competence-damaged protein KAB05_01553 PF00994 Probable molybdopterin binding domain KAB05_01553 PF18146 Damage-inducible protein CinA KH domain KAB05_01555 PF06628 Catalase-related immune-responsive KAB05_01555 PF18011 C-terminal domain found in long catalases KAB05_01555 PF00199 Catalase KAB05_01560 PF00717 Peptidase S24-like KAB05_01562 PF13404 AsnC-type helix-turn-helix domain KAB05_01562 PF01037 Lrp/AsnC ligand binding domain KAB05_01564 PF09308 LuxQ, periplasmic KAB05_01564 PF00072 Response regulator receiver domain KAB05_01564 PF00512 His Kinase A (phospho-acceptor) domain KAB05_01564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_01565 PF00072 Response regulator receiver domain KAB05_01567 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01568 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01569 PF00005 ABC transporter KAB05_01570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB05_01571 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB05_01572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01572 PF03466 LysR substrate binding domain KAB05_01573 PF01810 LysE type translocator KAB05_01574 PF00266 Aminotransferase class-V KAB05_01576 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_01577 PF00581 Rhodanese-like domain KAB05_01579 PF03466 LysR substrate binding domain KAB05_01579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01580 PF02798 Glutathione S-transferase, N-terminal domain KAB05_01581 PF14834 Glutathione S-transferase, C-terminal domain KAB05_01581 PF02798 Glutathione S-transferase, N-terminal domain KAB05_01582 PF03466 LysR substrate binding domain KAB05_01582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01583 PF03788 LrgA family KAB05_01584 PF04172 LrgB-like family KAB05_01585 PF00392 Bacterial regulatory proteins, gntR family KAB05_01585 PF00155 Aminotransferase class I and II KAB05_01588 PF07690 Major Facilitator Superfamily KAB05_01589 PF16957 Malonate decarboxylase, alpha subunit, transporter KAB05_01590 PF16957 Malonate decarboxylase, alpha subunit, transporter KAB05_01591 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KAB05_01592 PF06857 Malonate decarboxylase delta subunit (MdcD) KAB05_01593 PF01039 Carboxyl transferase domain KAB05_01595 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KAB05_01596 PF00698 Acyl transferase domain KAB05_01599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01599 PF03466 LysR substrate binding domain KAB05_01600 PF00392 Bacterial regulatory proteins, gntR family KAB05_01600 PF00155 Aminotransferase class I and II KAB05_01602 PF02322 Cytochrome bd terminal oxidase subunit II KAB05_01603 PF01654 Cytochrome bd terminal oxidase subunit I KAB05_01605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01605 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01606 PF00296 Luciferase-like monooxygenase KAB05_01607 PF00083 Sugar (and other) transporter KAB05_01610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB05_01611 PF00005 ABC transporter KAB05_01612 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01613 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KAB05_01614 PF01177 Asp/Glu/Hydantoin racemase KAB05_01615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB05_01617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01617 PF03466 LysR substrate binding domain KAB05_01621 PF03960 ArsC family KAB05_01622 PF01022 Bacterial regulatory protein, arsR family KAB05_01623 PF01758 Sodium Bile acid symporter family KAB05_01624 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01624 PF03466 LysR substrate binding domain KAB05_01627 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01627 PF13192 Thioredoxin domain KAB05_01630 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_01631 PF00588 SpoU rRNA Methylase family KAB05_01632 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAB05_01632 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAB05_01632 PF01336 OB-fold nucleic acid binding domain KAB05_01632 PF02811 PHP domain KAB05_01632 PF14579 Helix-hairpin-helix motif KAB05_01633 PF00710 Asparaginase, N-terminal KAB05_01633 PF17763 Glutaminase/Asparaginase C-terminal domain KAB05_01634 PF00375 Sodium:dicarboxylate symporter family KAB05_01635 PF00155 Aminotransferase class I and II KAB05_01636 PF01641 SelR domain KAB05_01637 PF00255 Glutathione peroxidase KAB05_01638 PF12833 Helix-turn-helix domain KAB05_01638 PF12852 Cupin KAB05_01640 PF00155 Aminotransferase class I and II KAB05_01641 PF01966 HD domain KAB05_01641 PF01909 Nucleotidyltransferase domain KAB05_01641 PF08335 GlnD PII-uridylyltransferase KAB05_01642 PF02222 ATP-grasp domain KAB05_01644 PF05437 Branched-chain amino acid transport protein (AzlD) KAB05_01645 PF03591 AzlC protein KAB05_01650 PF01926 50S ribosome-binding GTPase KAB05_01650 PF06071 Protein of unknown function (DUF933) KAB05_01651 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01652 PF00005 ABC transporter KAB05_01652 PF09383 NIL domain KAB05_01653 PF03180 NLPA lipoprotein KAB05_01654 PF03180 NLPA lipoprotein KAB05_01655 PF00296 Luciferase-like monooxygenase KAB05_01657 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01657 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01660 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01661 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01662 PF00005 ABC transporter KAB05_01664 PF01037 Lrp/AsnC ligand binding domain KAB05_01667 PF01709 Transcriptional regulator KAB05_01669 PF00440 Bacterial regulatory proteins, tetR family KAB05_01674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01674 PF03466 LysR substrate binding domain KAB05_01676 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB05_01678 PF00892 EamA-like transporter family KAB05_01682 PF13953 PapC C-terminal domain KAB05_01682 PF00577 Outer membrane usher protein KAB05_01682 PF13954 PapC N-terminal domain KAB05_01683 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB05_01683 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB05_01684 PF16970 Type-1 fimbrial protein, A KAB05_01687 PF04055 Radical SAM superfamily KAB05_01687 PF06968 Biotin and Thiamin Synthesis associated domain KAB05_01688 PF08331 Domain of unknown function (DUF1730) KAB05_01689 PF01256 Carbohydrate kinase KAB05_01689 PF03853 YjeF-related protein N-terminus KAB05_01690 PF02075 Crossover junction endodeoxyribonuclease RuvC KAB05_01693 PF00905 Penicillin binding protein transpeptidase domain KAB05_01697 PF02772 S-adenosylmethionine synthetase, central domain KAB05_01697 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAB05_01697 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAB05_01698 PF02779 Transketolase, pyrimidine binding domain KAB05_01698 PF02780 Transketolase, C-terminal domain KAB05_01698 PF00456 Transketolase, thiamine diphosphate binding domain KAB05_01700 PF04264 YceI-like domain KAB05_01702 PF09992 Phosphodiester glycosidase KAB05_01704 PF05958 tRNA (Uracil-5-)-methyltransferase KAB05_01705 PF04229 GrpB protein KAB05_01706 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KAB05_01706 PF14850 DNA-binding domain of Proline dehydrogenase KAB05_01706 PF00171 Aldehyde dehydrogenase family KAB05_01706 PF01619 Proline dehydrogenase KAB05_01707 PF01037 Lrp/AsnC ligand binding domain KAB05_01708 PF00474 Sodium:solute symporter family KAB05_01709 PF02146 Sir2 family KAB05_01710 PF01597 Glycine cleavage H-protein KAB05_01711 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB05_01711 PF12833 Helix-turn-helix domain KAB05_01713 PF00664 ABC transporter transmembrane region KAB05_01713 PF00005 ABC transporter KAB05_01714 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KAB05_01715 PF06912 Protein of unknown function (DUF1275) KAB05_01716 PF00375 Sodium:dicarboxylate symporter family KAB05_01719 PF08007 Cupin superfamily protein KAB05_01720 PF08007 Cupin superfamily protein KAB05_01721 PF02545 Maf-like protein KAB05_01723 PF00162 Phosphoglycerate kinase KAB05_01725 PF01116 Fructose-bisphosphate aldolase class-II KAB05_01726 PF09312 SurA N-terminal domain KAB05_01726 PF00639 PPIC-type PPIASE domain KAB05_01727 PF04453 LPS transport system D KAB05_01727 PF03968 OstA-like protein KAB05_01728 PF01636 Phosphotransferase enzyme family KAB05_01729 PF00483 Nucleotidyl transferase KAB05_01730 PF02527 rRNA small subunit methyltransferase G KAB05_01731 PF13614 AAA domain KAB05_01733 PF02195 ParB-like nuclease domain KAB05_01733 PF17762 HTH domain found in ParB protein KAB05_01734 PF01618 MotA/TolQ/ExbB proton channel family KAB05_01736 PF00005 ABC transporter KAB05_01736 PF00664 ABC transporter transmembrane region KAB05_01737 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAB05_01738 PF02348 Cytidylyltransferase KAB05_01739 PF09115 DNA polymerase III, delta subunit, C terminal KAB05_01741 PF01026 TatD related DNase KAB05_01744 PF07963 Prokaryotic N-terminal methylation motif KAB05_01744 PF02501 Type II secretion system (T2SS), protein I KAB05_01745 PF11612 Type II secretion system (T2SS), protein J KAB05_01745 PF07963 Prokaryotic N-terminal methylation motif KAB05_01746 PF03934 Type II secretion system (T2SS), protein K KAB05_01748 PF03167 Uracil DNA glycosylase superfamily KAB05_01750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB05_01752 PF02224 Cytidylate kinase KAB05_01753 PF00575 S1 RNA binding domain KAB05_01754 PF00216 Bacterial DNA-binding protein KAB05_01756 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB05_01758 PF00743 Flavin-binding monooxygenase-like KAB05_01760 PF03969 AFG1-like ATPase KAB05_01761 PF01274 Malate synthase KAB05_01764 PF02472 Biopolymer transport protein ExbD/TolR KAB05_01765 PF02472 Biopolymer transport protein ExbD/TolR KAB05_01766 PF01618 MotA/TolQ/ExbB proton channel family KAB05_01769 PF00593 TonB dependent receptor KAB05_01769 PF07715 TonB-dependent Receptor Plug Domain KAB05_01774 PF01432 Peptidase family M3 KAB05_01775 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01776 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01777 PF00005 ABC transporter KAB05_01777 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB05_01778 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB05_01778 PF00005 ABC transporter KAB05_01781 PF00459 Inositol monophosphatase family KAB05_01783 PF01649 Ribosomal protein S20 KAB05_01784 PF13460 NAD(P)H-binding KAB05_01785 PF03737 Aldolase/RraA KAB05_01790 PF00270 DEAD/DEAH box helicase KAB05_01790 PF00271 Helicase conserved C-terminal domain KAB05_01790 PF02559 CarD-like/TRCF domain KAB05_01790 PF17757 UvrB interaction domain KAB05_01790 PF03461 TRCF domain KAB05_01792 PF00211 Adenylate and Guanylate cyclase catalytic domain KAB05_01793 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_01794 PF00012 Hsp70 protein KAB05_01795 PF07743 HSCB C-terminal oligomerisation domain KAB05_01795 PF00226 DnaJ domain KAB05_01796 PF01521 Iron-sulphur cluster biosynthesis KAB05_01797 PF01592 NifU-like N terminal domain KAB05_01798 PF00266 Aminotransferase class-V KAB05_01799 PF02082 Transcriptional regulator KAB05_01802 PF00216 Bacterial DNA-binding protein KAB05_01803 PF00639 PPIC-type PPIASE domain KAB05_01803 PF09312 SurA N-terminal domain KAB05_01804 PF12852 Cupin KAB05_01804 PF12833 Helix-turn-helix domain KAB05_01805 PF00487 Fatty acid desaturase KAB05_01806 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01806 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01806 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01807 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_01807 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_01807 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_01808 PF03109 ABC1 family KAB05_01810 PF04073 Aminoacyl-tRNA editing domain KAB05_01811 PF06276 Ferric iron reductase FhuF-like transporter KAB05_01811 PF04183 IucA / IucC family KAB05_01812 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB05_01813 PF07690 Major Facilitator Superfamily KAB05_01814 PF04183 IucA / IucC family KAB05_01814 PF06276 Ferric iron reductase FhuF-like transporter KAB05_01815 PF06276 Ferric iron reductase FhuF-like transporter KAB05_01815 PF04183 IucA / IucC family KAB05_01818 PF07715 TonB-dependent Receptor Plug Domain KAB05_01818 PF00593 TonB dependent receptor KAB05_01823 PF13419 Haloacid dehalogenase-like hydrolase KAB05_01825 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KAB05_01826 PF02277 Phosphoribosyltransferase KAB05_01829 PF02654 Cobalamin-5-phosphate synthase KAB05_01830 PF00793 DAHP synthetase I family KAB05_01831 PF01925 Sulfite exporter TauE/SafE KAB05_01835 PF07715 TonB-dependent Receptor Plug Domain KAB05_01835 PF00593 TonB dependent receptor KAB05_01836 PF02684 Lipid-A-disaccharide synthetase KAB05_01838 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_01839 PF00005 ABC transporter KAB05_01846 PF01230 HIT domain KAB05_01852 PF08241 Methyltransferase domain KAB05_01853 PF00561 alpha/beta hydrolase fold KAB05_01854 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB05_01856 PF02575 YbaB/EbfC DNA-binding family KAB05_01857 PF02132 RecR protein KAB05_01857 PF13662 Toprim domain KAB05_01858 PF00570 HRDC domain KAB05_01858 PF01612 3'-5' exonuclease KAB05_01862 PF05166 YcgL domain KAB05_01864 PF00004 ATPase family associated with various cellular activities (AAA) KAB05_01864 PF17862 AAA+ lid domain KAB05_01864 PF01434 Peptidase family M41 KAB05_01866 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_01867 PF05175 Methyltransferase small domain KAB05_01868 PF01264 Chorismate synthase KAB05_01869 PF00990 Diguanylate cyclase, GGDEF domain KAB05_01869 PF08448 PAS fold KAB05_01872 PF04055 Radical SAM superfamily KAB05_01873 PF00676 Dehydrogenase E1 component KAB05_01874 PF02779 Transketolase, pyrimidine binding domain KAB05_01874 PF02780 Transketolase, C-terminal domain KAB05_01875 PF00364 Biotin-requiring enzyme KAB05_01875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB05_01875 PF02817 e3 binding domain KAB05_01876 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB05_01876 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_01877 PF00106 short chain dehydrogenase KAB05_01878 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_01878 PF00107 Zinc-binding dehydrogenase KAB05_01879 PF01062 Bestrophin, RFP-TM, chloride channel KAB05_01880 PF00158 Sigma-54 interaction domain KAB05_01880 PF00072 Response regulator receiver domain KAB05_01880 PF02954 Bacterial regulatory protein, Fis family KAB05_01881 PF04273 Putative phosphatase (DUF442) KAB05_01881 PF00753 Metallo-beta-lactamase superfamily KAB05_01882 PF04273 Putative phosphatase (DUF442) KAB05_01882 PF00753 Metallo-beta-lactamase superfamily KAB05_01883 PF01925 Sulfite exporter TauE/SafE KAB05_01886 PF06445 GyrI-like small molecule binding domain KAB05_01886 PF12833 Helix-turn-helix domain KAB05_01887 PF01638 HxlR-like helix-turn-helix KAB05_01888 PF02525 Flavodoxin-like fold KAB05_01895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB05_01896 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01897 PF00005 ABC transporter KAB05_01900 PF00083 Sugar (and other) transporter KAB05_01901 PF07715 TonB-dependent Receptor Plug Domain KAB05_01901 PF00593 TonB dependent receptor KAB05_01904 PF07715 TonB-dependent Receptor Plug Domain KAB05_01904 PF00593 TonB dependent receptor KAB05_01905 PF10415 Fumarase C C-terminus KAB05_01905 PF00206 Lyase KAB05_01908 PF03466 LysR substrate binding domain KAB05_01908 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01909 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01909 PF03466 LysR substrate binding domain KAB05_01910 PF00108 Thiolase, N-terminal domain KAB05_01910 PF02803 Thiolase, C-terminal domain KAB05_01911 PF02667 Short chain fatty acid transporter KAB05_01912 PF01144 Coenzyme A transferase KAB05_01913 PF01144 Coenzyme A transferase KAB05_01914 PF03466 LysR substrate binding domain KAB05_01914 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01920 PF06719 AraC-type transcriptional regulator N-terminus KAB05_01920 PF12833 Helix-turn-helix domain KAB05_01921 PF07690 Major Facilitator Superfamily KAB05_01922 PF01738 Dienelactone hydrolase family KAB05_01925 PF01613 Flavin reductase like domain KAB05_01927 PF14525 AraC-binding-like domain KAB05_01927 PF12833 Helix-turn-helix domain KAB05_01928 PF00970 Oxidoreductase FAD-binding domain KAB05_01928 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_01928 PF00175 Oxidoreductase NAD-binding domain KAB05_01929 PF00866 Ring hydroxylating beta subunit KAB05_01930 PF00355 Rieske [2Fe-2S] domain KAB05_01930 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB05_01931 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_01931 PF03459 TOBE domain KAB05_01933 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_01934 PF03459 TOBE domain KAB05_01934 PF00005 ABC transporter KAB05_01935 PF00106 short chain dehydrogenase KAB05_01936 PF00857 Isochorismatase family KAB05_01936 PF00550 Phosphopantetheine attachment site KAB05_01938 PF00149 Calcineurin-like phosphoesterase KAB05_01939 PF13089 Polyphosphate kinase N-terminal domain KAB05_01939 PF13090 Polyphosphate kinase C-terminal domain 2 KAB05_01939 PF02503 Polyphosphate kinase middle domain KAB05_01939 PF17941 Polyphosphate kinase C-terminal domain 1 KAB05_01940 PF12706 Beta-lactamase superfamily domain KAB05_01941 PF03070 TENA/THI-4/PQQC family KAB05_01942 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KAB05_01943 PF13186 Iron-sulfur cluster-binding domain KAB05_01943 PF04055 Radical SAM superfamily KAB05_01944 PF01244 Membrane dipeptidase (Peptidase family M19) KAB05_01948 PF13091 PLD-like domain KAB05_01951 PF00199 Catalase KAB05_01953 PF00107 Zinc-binding dehydrogenase KAB05_01953 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_01955 PF00419 Fimbrial protein KAB05_01956 PF00577 Outer membrane usher protein KAB05_01956 PF13954 PapC N-terminal domain KAB05_01956 PF13953 PapC C-terminal domain KAB05_01957 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB05_01957 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB05_01960 PF16970 Type-1 fimbrial protein, A KAB05_01964 PF01266 FAD dependent oxidoreductase KAB05_01967 PF01593 Flavin containing amine oxidoreductase KAB05_01968 PF00743 Flavin-binding monooxygenase-like KAB05_01969 PF12146 Serine aminopeptidase, S33 KAB05_01970 PF02321 Outer membrane efflux protein KAB05_01971 PF00873 AcrB/AcrD/AcrF family KAB05_01972 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_01972 PF00529 HlyD membrane-fusion protein of T1SS KAB05_01973 PF00486 Transcriptional regulatory protein, C terminal KAB05_01973 PF00072 Response regulator receiver domain KAB05_01974 PF00512 His Kinase A (phospho-acceptor) domain KAB05_01974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_01974 PF00672 HAMP domain KAB05_01974 PF16527 Two-component sensor protein CpxA, periplasmic domain KAB05_01976 PF12833 Helix-turn-helix domain KAB05_01976 PF02311 AraC-like ligand binding domain KAB05_01977 PF12146 Serine aminopeptidase, S33 KAB05_01988 PF02824 TGS domain KAB05_01988 PF13291 ACT domain KAB05_01988 PF04607 Region found in RelA / SpoT proteins KAB05_01990 PF01975 Survival protein SurE KAB05_01995 PF07690 Major Facilitator Superfamily KAB05_01996 PF13533 Biotin-lipoyl like KAB05_01997 PF01425 Amidase KAB05_01998 PF00196 Bacterial regulatory proteins, luxR family KAB05_02013 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB05_02014 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB05_02014 PF14572 Phosphoribosyl synthetase-associated domain KAB05_02018 PF00005 ABC transporter KAB05_02021 PF00107 Zinc-binding dehydrogenase KAB05_02021 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_02024 PF06719 AraC-type transcriptional regulator N-terminus KAB05_02024 PF12833 Helix-turn-helix domain KAB05_02025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB05_02025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB05_02026 PF07690 Major Facilitator Superfamily KAB05_02027 PF01370 NAD dependent epimerase/dehydratase family KAB05_02028 PF03466 LysR substrate binding domain KAB05_02028 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02030 PF00920 Dehydratase family KAB05_02031 PF00171 Aldehyde dehydrogenase family KAB05_02034 PF00529 HlyD membrane-fusion protein of T1SS KAB05_02034 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_02038 PF03737 Aldolase/RraA KAB05_02039 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB05_02039 PF01842 ACT domain KAB05_02039 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB05_02040 PF07690 Major Facilitator Superfamily KAB05_02044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02044 PF03466 LysR substrate binding domain KAB05_02046 PF08450 SMP-30/Gluconolactonase/LRE-like region KAB05_02049 PF04909 Amidohydrolase KAB05_02050 PF07690 Major Facilitator Superfamily KAB05_02053 PF04829 Pre-toxin domain with VENN motif KAB05_02053 PF05860 haemagglutination activity domain KAB05_02053 PF13332 Hemagglutinin repeat KAB05_02053 PF13018 Extended Signal Peptide of Type V secretion system KAB05_02054 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KAB05_02054 PF17287 POTRA domain KAB05_02054 PF08479 POTRA domain, ShlB-type KAB05_02056 PF01546 Peptidase family M20/M25/M40 KAB05_02056 PF07687 Peptidase dimerisation domain KAB05_02058 PF00999 Sodium/hydrogen exchanger family KAB05_02058 PF02254 TrkA-N domain KAB05_02059 PF07995 Glucose / Sorbosone dehydrogenase KAB05_02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02060 PF03466 LysR substrate binding domain KAB05_02061 PF00857 Isochorismatase family KAB05_02063 PF08359 YsiA-like protein, C-terminal region KAB05_02063 PF00440 Bacterial regulatory proteins, tetR family KAB05_02064 PF12706 Beta-lactamase superfamily domain KAB05_02066 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02068 PF00376 MerR family regulatory protein KAB05_02068 PF09278 MerR, DNA binding KAB05_02069 PF01872 RibD C-terminal domain KAB05_02070 PF00106 short chain dehydrogenase KAB05_02071 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_02071 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02072 PF01047 MarR family KAB05_02073 PF07859 alpha/beta hydrolase fold KAB05_02076 PF00199 Catalase KAB05_02076 PF06628 Catalase-related immune-responsive KAB05_02077 PF00561 alpha/beta hydrolase fold KAB05_02079 PF00171 Aldehyde dehydrogenase family KAB05_02080 PF00107 Zinc-binding dehydrogenase KAB05_02080 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_02081 PF00474 Sodium:solute symporter family KAB05_02082 PF04341 Protein of unknown function, DUF485 KAB05_02083 PF13193 AMP-binding enzyme C-terminal domain KAB05_02083 PF00501 AMP-binding enzyme KAB05_02084 PF06506 Propionate catabolism activator KAB05_02084 PF00158 Sigma-54 interaction domain KAB05_02084 PF02954 Bacterial regulatory protein, Fis family KAB05_02086 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_02086 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02086 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_02090 PF00171 Aldehyde dehydrogenase family KAB05_02092 PF07690 Major Facilitator Superfamily KAB05_02093 PF00920 Dehydratase family KAB05_02094 PF07729 FCD domain KAB05_02094 PF00392 Bacterial regulatory proteins, gntR family KAB05_02096 PF03466 LysR substrate binding domain KAB05_02096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02097 PF13378 Enolase C-terminal domain-like KAB05_02097 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB05_02098 PF02426 Muconolactone delta-isomerase KAB05_02099 PF04444 Catechol dioxygenase N terminus KAB05_02099 PF00775 Dioxygenase KAB05_02100 PF01144 Coenzyme A transferase KAB05_02101 PF01144 Coenzyme A transferase KAB05_02102 PF02803 Thiolase, C-terminal domain KAB05_02102 PF00108 Thiolase, N-terminal domain KAB05_02103 PF12146 Serine aminopeptidase, S33 KAB05_02104 PF01804 Penicillin amidase KAB05_02105 PF00171 Aldehyde dehydrogenase family KAB05_02107 PF01179 Copper amine oxidase, enzyme domain KAB05_02107 PF07833 Copper amine oxidase N-terminal domain KAB05_02107 PF02728 Copper amine oxidase, N3 domain KAB05_02107 PF02727 Copper amine oxidase, N2 domain KAB05_02108 PF12833 Helix-turn-helix domain KAB05_02108 PF02311 AraC-like ligand binding domain KAB05_02109 PF01613 Flavin reductase like domain KAB05_02110 PF00175 Oxidoreductase NAD-binding domain KAB05_02110 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_02113 PF00355 Rieske [2Fe-2S] domain KAB05_02113 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB05_02116 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02117 PF01425 Amidase KAB05_02119 PF07690 Major Facilitator Superfamily KAB05_02121 PF00106 short chain dehydrogenase KAB05_02124 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_02124 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_02124 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02125 PF03466 LysR substrate binding domain KAB05_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02126 PF01614 Bacterial transcriptional regulator KAB05_02126 PF09339 IclR helix-turn-helix domain KAB05_02127 PF00753 Metallo-beta-lactamase superfamily KAB05_02129 PF04143 Sulphur transport KAB05_02131 PF01011 PQQ enzyme repeat KAB05_02131 PF13360 PQQ-like domain KAB05_02132 PF04966 Carbohydrate-selective porin, OprB family KAB05_02133 PF05048 Periplasmic copper-binding protein (NosD) KAB05_02134 PF01487 Type I 3-dehydroquinase KAB05_02135 PF00775 Dioxygenase KAB05_02136 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KAB05_02136 PF00775 Dioxygenase KAB05_02137 PF02627 Carboxymuconolactone decarboxylase family KAB05_02138 PF07690 Major Facilitator Superfamily KAB05_02139 PF00561 alpha/beta hydrolase fold KAB05_02140 PF00206 Lyase KAB05_02140 PF10397 Adenylosuccinate lyase C-terminus KAB05_02141 PF00108 Thiolase, N-terminal domain KAB05_02141 PF02803 Thiolase, C-terminal domain KAB05_02142 PF01144 Coenzyme A transferase KAB05_02143 PF01144 Coenzyme A transferase KAB05_02144 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAB05_02145 PF04977 Septum formation initiator KAB05_02146 PF04239 Protein of unknown function (DUF421) KAB05_02147 PF03952 Enolase, N-terminal domain KAB05_02147 PF00113 Enolase, C-terminal TIM barrel domain KAB05_02148 PF00793 DAHP synthetase I family KAB05_02149 PF06418 CTP synthase N-terminus KAB05_02149 PF00117 Glutamine amidotransferase class-I KAB05_02155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_02155 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02158 PF00793 DAHP synthetase I family KAB05_02159 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KAB05_02160 PF02861 Clp amino terminal domain, pathogenicity island component KAB05_02160 PF07724 AAA domain (Cdc48 subfamily) KAB05_02160 PF10431 C-terminal, D2-small domain, of ClpB protein KAB05_02160 PF17871 AAA lid domain KAB05_02160 PF00004 ATPase family associated with various cellular activities (AAA) KAB05_02161 PF02617 ATP-dependent Clp protease adaptor protein ClpS KAB05_02163 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB05_02163 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB05_02166 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAB05_02167 PF00585 C-terminal regulatory domain of Threonine dehydratase KAB05_02167 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_02168 PF02080 TrkA-C domain KAB05_02168 PF02254 TrkA-N domain KAB05_02169 PF02386 Cation transport protein KAB05_02170 PF02253 Phospholipase A1 KAB05_02171 PF00675 Insulinase (Peptidase family M16) KAB05_02171 PF05193 Peptidase M16 inactive domain KAB05_02171 PF08367 Peptidase M16C associated KAB05_02172 PF00593 TonB dependent receptor KAB05_02172 PF07715 TonB-dependent Receptor Plug Domain KAB05_02173 PF00294 pfkB family carbohydrate kinase KAB05_02175 PF07290 Protein of unknown function (DUF1449) KAB05_02176 PF13737 Transposase DDE domain KAB05_02178 PF01654 Cytochrome bd terminal oxidase subunit I KAB05_02179 PF02322 Cytochrome bd terminal oxidase subunit II KAB05_02180 PF08173 Membrane bound YbgT-like protein KAB05_02183 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KAB05_02185 PF00448 SRP54-type protein, GTPase domain KAB05_02185 PF02881 SRP54-type protein, helical bundle domain KAB05_02190 PF00571 CBS domain KAB05_02190 PF00478 IMP dehydrogenase / GMP reductase domain KAB05_02191 PF00202 Aminotransferase class-III KAB05_02192 PF00462 Glutaredoxin KAB05_02194 PF03466 LysR substrate binding domain KAB05_02194 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02195 PF00557 Metallopeptidase family M24 KAB05_02196 PF05525 Branched-chain amino acid transport protein KAB05_02201 PF00391 PEP-utilising enzyme, mobile domain KAB05_02201 PF02896 PEP-utilising enzyme, TIM barrel domain KAB05_02201 PF00381 PTS HPr component phosphorylation site KAB05_02201 PF05524 PEP-utilising enzyme, N-terminal KAB05_02201 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAB05_02202 PF00294 pfkB family carbohydrate kinase KAB05_02203 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAB05_02203 PF02378 Phosphotransferase system, EIIC KAB05_02208 PF00563 EAL domain KAB05_02208 PF00990 Diguanylate cyclase, GGDEF domain KAB05_02208 PF03707 Bacterial signalling protein N terminal repeat KAB05_02210 PF07995 Glucose / Sorbosone dehydrogenase KAB05_02211 PF02586 SOS response associated peptidase (SRAP) KAB05_02212 PF01740 STAS domain KAB05_02212 PF00916 Sulfate permease family KAB05_02213 PF05922 Peptidase inhibitor I9 KAB05_02213 PF00082 Subtilase family KAB05_02216 PF00324 Amino acid permease KAB05_02217 PF00266 Aminotransferase class-V KAB05_02218 PF01037 Lrp/AsnC ligand binding domain KAB05_02223 PF13419 Haloacid dehalogenase-like hydrolase KAB05_02224 PF01479 S4 domain KAB05_02225 PF00154 recA bacterial DNA recombination protein KAB05_02226 PF02631 RecX family KAB05_02228 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAB05_02228 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_02229 PF07977 FabA-like domain KAB05_02230 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_02230 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAB05_02232 PF01103 Surface antigen KAB05_02232 PF07244 Surface antigen variable number repeat KAB05_02233 PF07244 Surface antigen variable number repeat KAB05_02233 PF01103 Surface antigen KAB05_02234 PF13180 PDZ domain KAB05_02234 PF17820 PDZ domain KAB05_02234 PF02163 Peptidase family M50 KAB05_02235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAB05_02235 PF13288 DXP reductoisomerase C-terminal domain KAB05_02235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAB05_02238 PF01255 Putative undecaprenyl diphosphate synthase KAB05_02239 PF01765 Ribosome recycling factor KAB05_02240 PF00696 Amino acid kinase family KAB05_02241 PF04055 Radical SAM superfamily KAB05_02241 PF00919 Uncharacterized protein family UPF0004 KAB05_02241 PF18693 TRAM domain KAB05_02242 PF00989 PAS fold KAB05_02242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_02242 PF00512 His Kinase A (phospho-acceptor) domain KAB05_02243 PF00989 PAS fold KAB05_02243 PF00512 His Kinase A (phospho-acceptor) domain KAB05_02243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_02244 PF02954 Bacterial regulatory protein, Fis family KAB05_02244 PF00158 Sigma-54 interaction domain KAB05_02244 PF00072 Response regulator receiver domain KAB05_02245 PF00440 Bacterial regulatory proteins, tetR family KAB05_02246 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB05_02246 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB05_02248 PF02542 YgbB family KAB05_02250 PF01266 FAD dependent oxidoreductase KAB05_02254 PF00206 Lyase KAB05_02254 PF10415 Fumarase C C-terminus KAB05_02255 PF16363 GDP-mannose 4,6 dehydratase KAB05_02256 PF02635 DsrE/DsrF-like family KAB05_02260 PF00892 EamA-like transporter family KAB05_02261 PF00155 Aminotransferase class I and II KAB05_02261 PF00392 Bacterial regulatory proteins, gntR family KAB05_02262 PF01638 HxlR-like helix-turn-helix KAB05_02263 PF03453 MoeA N-terminal region (domain I and II) KAB05_02263 PF03454 MoeA C-terminal region (domain IV) KAB05_02263 PF00994 Probable molybdopterin binding domain KAB05_02264 PF00994 Probable molybdopterin binding domain KAB05_02264 PF01967 MoaC family KAB05_02265 PF02391 MoaE protein KAB05_02267 PF04055 Radical SAM superfamily KAB05_02267 PF06463 Molybdenum Cofactor Synthesis C KAB05_02268 PF01568 Molydopterin dinucleotide binding domain KAB05_02268 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB05_02268 PF00384 Molybdopterin oxidoreductase KAB05_02269 PF12804 MobA-like NTP transferase domain KAB05_02270 PF00384 Molybdopterin oxidoreductase KAB05_02270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB05_02270 PF04324 BFD-like [2Fe-2S] binding domain KAB05_02270 PF01568 Molydopterin dinucleotide binding domain KAB05_02271 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB05_02271 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB05_02271 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB05_02271 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02271 PF04324 BFD-like [2Fe-2S] binding domain KAB05_02272 PF13806 Rieske-like [2Fe-2S] domain KAB05_02272 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB05_02272 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB05_02272 PF04324 BFD-like [2Fe-2S] binding domain KAB05_02272 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB05_02272 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02274 PF00072 Response regulator receiver domain KAB05_02274 PF00486 Transcriptional regulatory protein, C terminal KAB05_02275 PF00005 ABC transporter KAB05_02276 PF00817 impB/mucB/samB family KAB05_02276 PF13438 Domain of unknown function (DUF4113) KAB05_02276 PF11799 impB/mucB/samB family C-terminal domain KAB05_02277 PF01220 Dehydroquinase class II KAB05_02278 PF00364 Biotin-requiring enzyme KAB05_02279 PF00289 Biotin carboxylase, N-terminal domain KAB05_02279 PF02785 Biotin carboxylase C-terminal domain KAB05_02279 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB05_02281 PF12832 MFS_1 like family KAB05_02285 PF01645 Conserved region in glutamate synthase KAB05_02288 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAB05_02288 PF01565 FAD binding domain KAB05_02289 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB05_02291 PF00465 Iron-containing alcohol dehydrogenase KAB05_02292 PF03061 Thioesterase superfamily KAB05_02293 PF04185 Phosphoesterase family KAB05_02293 PF05506 Domain of unknown function (DUF756) KAB05_02295 PF12170 DNA polymerase III tau subunit V interacting with alpha KAB05_02295 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KAB05_02295 PF12169 DNA polymerase III subunits gamma and tau domain III KAB05_02296 PF07690 Major Facilitator Superfamily KAB05_02301 PF02803 Thiolase, C-terminal domain KAB05_02301 PF00108 Thiolase, N-terminal domain KAB05_02303 PF03466 LysR substrate binding domain KAB05_02303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02305 PF01810 LysE type translocator KAB05_02306 PF01037 Lrp/AsnC ligand binding domain KAB05_02307 PF03594 Benzoate membrane transport protein KAB05_02308 PF02308 MgtC family KAB05_02309 PF00689 Cation transporting ATPase, C-terminus KAB05_02309 PF00690 Cation transporter/ATPase, N-terminus KAB05_02314 PF00582 Universal stress protein family KAB05_02315 PF00005 ABC transporter KAB05_02315 PF12848 ABC transporter KAB05_02319 PF07715 TonB-dependent Receptor Plug Domain KAB05_02319 PF00593 TonB dependent receptor KAB05_02327 PF00924 Mechanosensitive ion channel KAB05_02328 PF00593 TonB dependent receptor KAB05_02328 PF07715 TonB-dependent Receptor Plug Domain KAB05_02329 PF00440 Bacterial regulatory proteins, tetR family KAB05_02331 PF01037 Lrp/AsnC ligand binding domain KAB05_02332 PF01817 Chorismate mutase type II KAB05_02335 PF00106 short chain dehydrogenase KAB05_02337 PF11940 Domain of unknown function (DUF3458) Ig-like fold KAB05_02337 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KAB05_02337 PF01433 Peptidase family M1 domain KAB05_02340 PF02110 Hydroxyethylthiazole kinase family KAB05_02341 PF06445 GyrI-like small molecule binding domain KAB05_02343 PF14493 Helix-turn-helix domain KAB05_02343 PF05970 PIF1-like helicase KAB05_02344 PF00465 Iron-containing alcohol dehydrogenase KAB05_02347 PF00171 Aldehyde dehydrogenase family KAB05_02348 PF13520 Amino acid permease KAB05_02350 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KAB05_02351 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KAB05_02352 PF00117 Glutamine amidotransferase class-I KAB05_02352 PF00958 GMP synthase C terminal domain KAB05_02352 PF02540 NAD synthase KAB05_02353 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAB05_02353 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB05_02354 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB05_02355 PF00149 Calcineurin-like phosphoesterase KAB05_02357 PF00881 Nitroreductase family KAB05_02359 PF17209 Hfq protein KAB05_02361 PF01119 DNA mismatch repair protein, C-terminal domain KAB05_02361 PF08676 MutL C terminal dimerisation domain KAB05_02362 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAB05_02363 PF00849 RNA pseudouridylate synthase KAB05_02363 PF01479 S4 domain KAB05_02366 PF01479 S4 domain KAB05_02366 PF00849 RNA pseudouridylate synthase KAB05_02368 PF04284 Protein of unknown function (DUF441) KAB05_02369 PF03466 LysR substrate binding domain KAB05_02369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02372 PF07690 Major Facilitator Superfamily KAB05_02373 PF00027 Cyclic nucleotide-binding domain KAB05_02373 PF00520 Ion transport protein KAB05_02375 PF06434 Aconitate hydratase 2 N-terminus KAB05_02375 PF11791 Aconitate B N-terminal domain KAB05_02375 PF00330 Aconitase family (aconitate hydratase) KAB05_02378 PF17243 POTRA domain TamA domain 1 KAB05_02378 PF01103 Surface antigen KAB05_02378 PF07244 Surface antigen variable number repeat KAB05_02379 PF07690 Major Facilitator Superfamily KAB05_02380 PF03232 Ubiquinone biosynthesis protein COQ7 KAB05_02382 PF00120 Glutamine synthetase, catalytic domain KAB05_02383 PF00486 Transcriptional regulatory protein, C terminal KAB05_02383 PF00072 Response regulator receiver domain KAB05_02384 PF00512 His Kinase A (phospho-acceptor) domain KAB05_02384 PF13493 Domain of unknown function (DUF4118) KAB05_02384 PF02702 Osmosensitive K+ channel His kinase sensor domain KAB05_02384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_02385 PF02669 K+-transporting ATPase, c chain KAB05_02387 PF03814 Potassium-transporting ATPase A subunit KAB05_02390 PF03109 ABC1 family KAB05_02391 PF00899 ThiF family KAB05_02392 PF01613 Flavin reductase like domain KAB05_02393 PF13193 AMP-binding enzyme C-terminal domain KAB05_02393 PF00501 AMP-binding enzyme KAB05_02394 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02394 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_02394 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_02395 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_02395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_02396 PF00106 short chain dehydrogenase KAB05_02397 PF12833 Helix-turn-helix domain KAB05_02398 PF09084 NMT1/THI5 like KAB05_02399 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02400 PF17827 PrmC N-terminal domain KAB05_02400 PF13847 Methyltransferase domain KAB05_02401 PF00472 RF-1 domain KAB05_02401 PF03462 PCRF domain KAB05_02403 PF03466 LysR substrate binding domain KAB05_02403 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02406 PF00296 Luciferase-like monooxygenase KAB05_02409 PF00535 Glycosyl transferase family 2 KAB05_02410 PF14883 Hypothetical glycosyl hydrolase family 13 KAB05_02410 PF01522 Polysaccharide deacetylase KAB05_02412 PF03618 Kinase/pyrophosphorylase KAB05_02413 PF00391 PEP-utilising enzyme, mobile domain KAB05_02413 PF02896 PEP-utilising enzyme, TIM barrel domain KAB05_02413 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAB05_02415 PF06481 COX Aromatic Rich Motif KAB05_02415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAB05_02416 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAB05_02417 PF00510 Cytochrome c oxidase subunit III KAB05_02418 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KAB05_02419 PF01040 UbiA prenyltransferase family KAB05_02420 PF01250 Ribosomal protein S6 KAB05_02421 PF01084 Ribosomal protein S18 KAB05_02422 PF03948 Ribosomal protein L9, C-terminal domain KAB05_02422 PF01281 Ribosomal protein L9, N-terminal domain KAB05_02423 PF00772 DnaB-like helicase N terminal domain KAB05_02423 PF03796 DnaB-like helicase C terminal domain KAB05_02424 PF00842 Alanine racemase, C-terminal domain KAB05_02424 PF01168 Alanine racemase, N-terminal domain KAB05_02426 PF08379 Bacterial transglutaminase-like N-terminal region KAB05_02426 PF01841 Transglutaminase-like superfamily KAB05_02428 PF14403 Circularly permuted ATP-grasp type 2 KAB05_02430 PF13932 GidA associated domain KAB05_02430 PF01134 Glucose inhibited division protein A KAB05_02434 PF02954 Bacterial regulatory protein, Fis family KAB05_02435 PF02142 MGS-like domain KAB05_02435 PF01808 AICARFT/IMPCHase bienzyme KAB05_02436 PF02844 Phosphoribosylglycinamide synthetase, N domain KAB05_02436 PF02843 Phosphoribosylglycinamide synthetase, C domain KAB05_02436 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAB05_02437 PF03180 NLPA lipoprotein KAB05_02438 PF00005 ABC transporter KAB05_02438 PF09383 NIL domain KAB05_02439 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02440 PF00753 Metallo-beta-lactamase superfamily KAB05_02440 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAB05_02441 PF13610 DDE domain KAB05_02444 PF07091 Ribosomal RNA methyltransferase (FmrO) KAB05_02445 PF13737 Transposase DDE domain KAB05_02447 PF00809 Pterin binding enzyme KAB05_02448 PF00893 Small Multidrug Resistance protein KAB05_02449 PF01909 Nucleotidyltransferase domain KAB05_02449 PF13427 Domain of unknown function (DUF4111) KAB05_02450 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_02452 PF00589 Phage integrase family KAB05_02452 PF13495 Phage integrase, N-terminal SAM-like domain KAB05_02453 PF13610 DDE domain KAB05_02455 PF07995 Glucose / Sorbosone dehydrogenase KAB05_02456 PF00892 EamA-like transporter family KAB05_02457 PF01177 Asp/Glu/Hydantoin racemase KAB05_02459 PF02470 MlaD protein KAB05_02460 PF04403 Paraquat-inducible protein A KAB05_02462 PF06826 Predicted Permease Membrane Region KAB05_02462 PF02080 TrkA-C domain KAB05_02463 PF00155 Aminotransferase class I and II KAB05_02466 PF08946 Osmosensory transporter coiled coil KAB05_02466 PF00083 Sugar (and other) transporter KAB05_02477 PF07729 FCD domain KAB05_02477 PF00392 Bacterial regulatory proteins, gntR family KAB05_02479 PF03616 Sodium/glutamate symporter KAB05_02480 PF00561 alpha/beta hydrolase fold KAB05_02485 PF04076 Bacterial OB fold (BOF) protein KAB05_02491 PF00324 Amino acid permease KAB05_02492 PF00171 Aldehyde dehydrogenase family KAB05_02493 PF00202 Aminotransferase class-III KAB05_02494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02494 PF03466 LysR substrate binding domain KAB05_02499 PF00069 Protein kinase domain KAB05_02503 PF00814 Glycoprotease family KAB05_02504 PF01165 Ribosomal protein S21 KAB05_02505 PF09424 Yqey-like protein KAB05_02506 PF01435 Peptidase family M48 KAB05_02507 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB05_02507 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB05_02510 PF00156 Phosphoribosyl transferase domain KAB05_02512 PF01180 Dihydroorotate dehydrogenase KAB05_02517 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAB05_02517 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAB05_02518 PF00881 Nitroreductase family KAB05_02520 PF00271 Helicase conserved C-terminal domain KAB05_02520 PF00270 DEAD/DEAH box helicase KAB05_02521 PF00313 'Cold-shock' DNA-binding domain KAB05_02523 PF04545 Sigma-70, region 4 KAB05_02523 PF04542 Sigma-70 region 2 KAB05_02523 PF00140 Sigma-70 factor, region 1.2 KAB05_02524 PF04241 Protein of unknown function (DUF423) KAB05_02526 PF05690 Thiazole biosynthesis protein ThiG KAB05_02528 PF03883 Peroxide stress protein YaaA KAB05_02530 PF12706 Beta-lactamase superfamily domain KAB05_02531 PF01546 Peptidase family M20/M25/M40 KAB05_02531 PF07687 Peptidase dimerisation domain KAB05_02533 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB05_02534 PF00800 Prephenate dehydratase KAB05_02534 PF01817 Chorismate mutase type II KAB05_02534 PF01842 ACT domain KAB05_02535 PF00756 Putative esterase KAB05_02536 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_02536 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_02536 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02537 PF00375 Sodium:dicarboxylate symporter family KAB05_02538 PF00591 Glycosyl transferase family, a/b domain KAB05_02538 PF02885 Glycosyl transferase family, helical bundle domain KAB05_02539 PF07023 Protein of unknown function (DUF1315) KAB05_02540 PF01513 ATP-NAD kinase KAB05_02541 PF00912 Transglycosylase KAB05_02541 PF14814 Bifunctional transglycosylase second domain KAB05_02541 PF00905 Penicillin binding protein transpeptidase domain KAB05_02543 PF00293 NUDIX domain KAB05_02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_02545 PF08521 Two-component sensor kinase N-terminal KAB05_02545 PF00512 His Kinase A (phospho-acceptor) domain KAB05_02546 PF00486 Transcriptional regulatory protein, C terminal KAB05_02546 PF00072 Response regulator receiver domain KAB05_02548 PF00437 Type II/IV secretion system protein KAB05_02550 PF01980 tRNA-methyltransferase O KAB05_02550 PF18389 TrmO C-terminal domain KAB05_02551 PF00175 Oxidoreductase NAD-binding domain KAB05_02551 PF00970 Oxidoreductase FAD-binding domain KAB05_02552 PF02567 Phenazine biosynthesis-like protein KAB05_02553 PF00392 Bacterial regulatory proteins, gntR family KAB05_02553 PF00155 Aminotransferase class I and II KAB05_02555 PF00037 4Fe-4S binding domain KAB05_02556 PF00893 Small Multidrug Resistance protein KAB05_02557 PF00005 ABC transporter KAB05_02558 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02559 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02560 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB05_02561 PF03466 LysR substrate binding domain KAB05_02561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02563 PF13533 Biotin-lipoyl like KAB05_02564 PF00873 AcrB/AcrD/AcrF family KAB05_02565 PF02321 Outer membrane efflux protein KAB05_02566 PF00464 Serine hydroxymethyltransferase KAB05_02572 PF00005 ABC transporter KAB05_02573 PF01061 ABC-2 type transporter KAB05_02574 PF14489 QueF-like protein KAB05_02574 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KAB05_02576 PF01098 Cell cycle protein KAB05_02577 PF13406 Transglycosylase SLT domain KAB05_02578 PF03330 Lytic transglycolase KAB05_02578 PF05036 Sporulation related domain KAB05_02582 PF12833 Helix-turn-helix domain KAB05_02584 PF00889 Elongation factor TS KAB05_02585 PF00318 Ribosomal protein S2 KAB05_02586 PF00557 Metallopeptidase family M24 KAB05_02588 PF07690 Major Facilitator Superfamily KAB05_02591 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB05_02591 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02592 PF04055 Radical SAM superfamily KAB05_02593 PF09317 Domain of unknown function (DUF1974) KAB05_02593 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_02593 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_02596 PF05221 S-adenosyl-L-homocysteine hydrolase KAB05_02596 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB05_02597 PF02219 Methylenetetrahydrofolate reductase KAB05_02598 PF04452 RNA methyltransferase KAB05_02599 PF03707 Bacterial signalling protein N terminal repeat KAB05_02599 PF00990 Diguanylate cyclase, GGDEF domain KAB05_02599 PF00563 EAL domain KAB05_02600 PF00390 Malic enzyme, N-terminal domain KAB05_02600 PF03949 Malic enzyme, NAD binding domain KAB05_02600 PF01515 Phosphate acetyl/butaryl transferase KAB05_02601 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB05_02601 PF01743 Poly A polymerase head domain KAB05_02602 PF13180 PDZ domain KAB05_02603 PF01784 NIF3 (NGG1p interacting factor 3) KAB05_02604 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAB05_02604 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAB05_02611 PF01040 UbiA prenyltransferase family KAB05_02612 PF04345 Chorismate lyase KAB05_02614 PF00854 POT family KAB05_02616 PF13356 Arm DNA-binding domain KAB05_02616 PF00589 Phage integrase family KAB05_02631 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system KAB05_02674 PF12161 HsdM N-terminal domain KAB05_02674 PF02384 N-6 DNA Methylase KAB05_02697 PF01476 LysM domain KAB05_02697 PF01551 Peptidase family M23 KAB05_02697 PF08525 Opacity-associated protein A N-terminal motif KAB05_02739 PF01555 DNA methylase KAB05_02745 PF01555 DNA methylase KAB05_02763 PF00117 Glutamine amidotransferase class-I KAB05_02764 PF01433 Peptidase family M1 domain KAB05_02764 PF11838 ERAP1-like C-terminal domain KAB05_02765 PF00593 TonB dependent receptor KAB05_02765 PF07715 TonB-dependent Receptor Plug Domain KAB05_02766 PF00591 Glycosyl transferase family, a/b domain KAB05_02766 PF02885 Glycosyl transferase family, helical bundle domain KAB05_02767 PF00218 Indole-3-glycerol phosphate synthase KAB05_02770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB05_02770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAB05_02771 PF01799 [2Fe-2S] binding domain KAB05_02771 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_02775 PF00144 Beta-lactamase KAB05_02778 PF05675 Protein of unknown function (DUF817) KAB05_02779 PF01208 Uroporphyrinogen decarboxylase (URO-D) KAB05_02781 PF00425 chorismate binding enzyme KAB05_02783 PF00975 Thioesterase domain KAB05_02784 PF00664 ABC transporter transmembrane region KAB05_02784 PF00005 ABC transporter KAB05_02785 PF00664 ABC transporter transmembrane region KAB05_02785 PF00005 ABC transporter KAB05_02787 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB05_02788 PF00550 Phosphopantetheine attachment site KAB05_02788 PF00857 Isochorismatase family KAB05_02789 PF13193 AMP-binding enzyme C-terminal domain KAB05_02789 PF00501 AMP-binding enzyme KAB05_02790 PF00668 Condensation domain KAB05_02790 PF00550 Phosphopantetheine attachment site KAB05_02790 PF00501 AMP-binding enzyme KAB05_02791 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB05_02792 PF07715 TonB-dependent Receptor Plug Domain KAB05_02792 PF00593 TonB dependent receptor KAB05_02793 PF00593 TonB dependent receptor KAB05_02793 PF07715 TonB-dependent Receptor Plug Domain KAB05_02794 PF01497 Periplasmic binding protein KAB05_02795 PF00005 ABC transporter KAB05_02796 PF01032 FecCD transport family KAB05_02797 PF01032 FecCD transport family KAB05_02800 PF00550 Phosphopantetheine attachment site KAB05_02800 PF00668 Condensation domain KAB05_02800 PF13193 AMP-binding enzyme C-terminal domain KAB05_02800 PF00975 Thioesterase domain KAB05_02800 PF00501 AMP-binding enzyme KAB05_02801 PF00668 Condensation domain KAB05_02801 PF00501 AMP-binding enzyme KAB05_02801 PF13193 AMP-binding enzyme C-terminal domain KAB05_02801 PF00550 Phosphopantetheine attachment site KAB05_02803 PF13309 HTH domain KAB05_02803 PF08348 YheO-like PAS domain KAB05_02804 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_02805 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_02806 PF17954 Quercetinase C-terminal cupin domain KAB05_02806 PF02678 Pirin KAB05_02809 PF00440 Bacterial regulatory proteins, tetR family KAB05_02810 PF08659 KR domain KAB05_02810 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB05_02810 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB05_02810 PF00550 Phosphopantetheine attachment site KAB05_02810 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_02810 PF09277 Erythronolide synthase, docking KAB05_02810 PF16197 Ketoacyl-synthetase C-terminal extension KAB05_02810 PF00698 Acyl transferase domain KAB05_02810 PF08990 Erythronolide synthase docking KAB05_02810 PF14765 Polyketide synthase dehydratase KAB05_02811 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB05_02811 PF13378 Enolase C-terminal domain-like KAB05_02812 PF00083 Sugar (and other) transporter KAB05_02813 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KAB05_02815 PF00892 EamA-like transporter family KAB05_02821 PF01266 FAD dependent oxidoreductase KAB05_02821 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB05_02822 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02822 PF18113 Rubredoxin binding C-terminal domain KAB05_02824 PF00355 Rieske [2Fe-2S] domain KAB05_02824 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB05_02825 PF02028 BCCT, betaine/carnitine/choline family transporter KAB05_02826 PF02028 BCCT, betaine/carnitine/choline family transporter KAB05_02827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02827 PF03466 LysR substrate binding domain KAB05_02828 PF00324 Amino acid permease KAB05_02829 PF00171 Aldehyde dehydrogenase family KAB05_02832 PF06018 CodY GAF-like domain KAB05_02832 PF17853 GGDEF-like domain KAB05_02832 PF13556 PucR C-terminal helix-turn-helix domain KAB05_02839 PF04328 Selenoprotein, putative KAB05_02840 PF13722 5TM C-terminal transporter carbon starvation CstA KAB05_02840 PF02554 Carbon starvation protein CstA KAB05_02841 PF09285 Elongation factor P, C-terminal KAB05_02841 PF08207 Elongation factor P (EF-P) KOW-like domain KAB05_02841 PF01132 Elongation factor P (EF-P) OB domain KAB05_02842 PF04055 Radical SAM superfamily KAB05_02845 PF01197 Ribosomal protein L31 KAB05_02846 PF13593 SBF-like CPA transporter family (DUF4137) KAB05_02847 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB05_02848 PF07690 Major Facilitator Superfamily KAB05_02849 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB05_02849 PF13654 AAA domain KAB05_02850 PF03466 LysR substrate binding domain KAB05_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02851 PF01476 LysM domain KAB05_02851 PF01551 Peptidase family M23 KAB05_02852 PF01975 Survival protein SurE KAB05_02855 PF07943 Penicillin-binding protein 5, C-terminal domain KAB05_02855 PF00768 D-alanyl-D-alanine carboxypeptidase KAB05_02856 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_02857 PF00293 NUDIX domain KAB05_02857 PF13344 Haloacid dehalogenase-like hydrolase KAB05_02859 PF04356 Protein of unknown function (DUF489) KAB05_02860 PF08328 Adenylosuccinate lyase C-terminal KAB05_02860 PF00206 Lyase KAB05_02863 PF08496 Peptidase family S49 N-terminal KAB05_02863 PF01343 Peptidase family S49 KAB05_02864 PF00005 ABC transporter KAB05_02865 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02866 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02867 PF12849 PBP superfamily domain KAB05_02868 PF00324 Amino acid permease KAB05_02869 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB05_02869 PF00205 Thiamine pyrophosphate enzyme, central domain KAB05_02869 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB05_02870 PF01037 Lrp/AsnC ligand binding domain KAB05_02871 PF00171 Aldehyde dehydrogenase family KAB05_02872 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB05_02873 PF00202 Aminotransferase class-III KAB05_02875 PF00440 Bacterial regulatory proteins, tetR family KAB05_02875 PF17754 MftR C-terminal domain KAB05_02877 PF00487 Fatty acid desaturase KAB05_02878 PF00175 Oxidoreductase NAD-binding domain KAB05_02878 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB05_02878 PF00970 Oxidoreductase FAD-binding domain KAB05_02879 PF00440 Bacterial regulatory proteins, tetR family KAB05_02884 PF00271 Helicase conserved C-terminal domain KAB05_02884 PF12137 RNA polymerase recycling family C-terminal KAB05_02884 PF00176 SNF2 family N-terminal domain KAB05_02884 PF18339 RapA N-terminal Tudor like domain 1 KAB05_02884 PF18337 RapA N-terminal Tudor like domain KAB05_02885 PF00849 RNA pseudouridylate synthase KAB05_02887 PF00202 Aminotransferase class-III KAB05_02888 PF02581 Thiamine monophosphate synthase KAB05_02893 PF05193 Peptidase M16 inactive domain KAB05_02893 PF00675 Insulinase (Peptidase family M16) KAB05_02894 PF02567 Phenazine biosynthesis-like protein KAB05_02896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02896 PF03466 LysR substrate binding domain KAB05_02897 PF06779 Uncharacterised MFS-type transporter YbfB KAB05_02900 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB05_02901 PF00849 RNA pseudouridylate synthase KAB05_02902 PF03971 Monomeric isocitrate dehydrogenase KAB05_02904 PF00768 D-alanyl-D-alanine carboxypeptidase KAB05_02904 PF07943 Penicillin-binding protein 5, C-terminal domain KAB05_02905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_02906 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB05_02907 PF03441 FAD binding domain of DNA photolyase KAB05_02907 PF00875 DNA photolyase KAB05_02913 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB05_02917 PF03060 Nitronate monooxygenase KAB05_02918 PF03060 Nitronate monooxygenase KAB05_02919 PF01207 Dihydrouridine synthase (Dus) KAB05_02920 PF07759 Protein of unknown function (DUF1615) KAB05_02922 PF01472 PUA domain KAB05_02922 PF00696 Amino acid kinase family KAB05_02923 PF01018 GTP1/OBG KAB05_02923 PF01926 50S ribosome-binding GTPase KAB05_02926 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB05_02926 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB05_02927 PF00892 EamA-like transporter family KAB05_02929 PF00271 Helicase conserved C-terminal domain KAB05_02929 PF04851 Type III restriction enzyme, res subunit KAB05_02929 PF02151 UvrB/uvrC motif KAB05_02929 PF17757 UvrB interaction domain KAB05_02929 PF12344 Ultra-violet resistance protein B KAB05_02931 PF17151 Periplasmic sensor domain KAB05_02931 PF00990 Diguanylate cyclase, GGDEF domain KAB05_02938 PF00106 short chain dehydrogenase KAB05_02939 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KAB05_02940 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KAB05_02941 PF02565 Recombination protein O C terminal KAB05_02941 PF11967 Recombination protein O N terminal KAB05_02943 PF07650 KH domain KAB05_02943 PF01926 50S ribosome-binding GTPase KAB05_02944 PF14622 Ribonuclease-III-like KAB05_02944 PF00035 Double-stranded RNA binding motif KAB05_02946 PF10502 Signal peptidase, peptidase S26 KAB05_02947 PF03144 Elongation factor Tu domain 2 KAB05_02947 PF00679 Elongation factor G C-terminus KAB05_02947 PF00009 Elongation factor Tu GTP binding domain KAB05_02947 PF06421 GTP-binding protein LepA C-terminus KAB05_02949 PF13180 PDZ domain KAB05_02950 PF02910 Fumarate reductase flavoprotein C-term KAB05_02950 PF00890 FAD binding domain KAB05_02952 PF02223 Thymidylate kinase KAB05_02953 PF02618 YceG-like family KAB05_02954 PF01063 Amino-transferase class IV KAB05_02957 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02958 PF00528 Binding-protein-dependent transport system inner membrane component KAB05_02959 PF00005 ABC transporter KAB05_02959 PF12857 TOBE-like domain KAB05_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_02960 PF03466 LysR substrate binding domain KAB05_02962 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KAB05_02962 PF14602 Hexapeptide repeat of succinyl-transferase KAB05_02962 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_02964 PF06508 Queuosine biosynthesis protein QueC KAB05_02967 PF00578 AhpC/TSA family KAB05_02969 PF01467 Cytidylyltransferase-like KAB05_02969 PF00293 NUDIX domain KAB05_02970 PF00378 Enoyl-CoA hydratase/isomerase KAB05_02971 PF01784 NIF3 (NGG1p interacting factor 3) KAB05_02973 PF07690 Major Facilitator Superfamily KAB05_02974 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAB05_02974 PF02769 AIR synthase related protein, C-terminal domain KAB05_02974 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KAB05_02975 PF01966 HD domain KAB05_02976 PF01330 RuvA N terminal domain KAB05_02976 PF07499 RuvA, C-terminal domain KAB05_02977 PF17864 RuvB AAA lid domain KAB05_02977 PF05491 RuvB C-terminal winged helix domain KAB05_02977 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAB05_02978 PF01546 Peptidase family M20/M25/M40 KAB05_02978 PF07687 Peptidase dimerisation domain KAB05_02979 PF03061 Thioesterase superfamily KAB05_02980 PF01618 MotA/TolQ/ExbB proton channel family KAB05_02981 PF02472 Biopolymer transport protein ExbD/TolR KAB05_02983 PF04052 TolB amino-terminal domain KAB05_02983 PF07676 WD40-like Beta Propeller Repeat KAB05_02984 PF00691 OmpA family KAB05_02986 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KAB05_02987 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB05_02987 PF00588 SpoU rRNA Methylase family KAB05_02996 PF08299 Bacterial dnaA protein helix-turn-helix KAB05_02996 PF11638 DnaA N-terminal domain KAB05_02996 PF00308 Bacterial dnaA protein KAB05_02997 PF01594 AI-2E family transporter KAB05_02998 PF02769 AIR synthase related protein, C-terminal domain KAB05_02998 PF00586 AIR synthase related protein, N-terminal domain KAB05_02999 PF00551 Formyl transferase KAB05_03000 PF12697 Alpha/beta hydrolase family KAB05_03001 PF01343 Peptidase family S49 KAB05_03001 PF06965 Na+/H+ antiporter 1 KAB05_03003 PF00753 Metallo-beta-lactamase superfamily KAB05_03003 PF13567 Domain of unknown function (DUF4131) KAB05_03003 PF03772 Competence protein KAB05_03004 PF03772 Competence protein KAB05_03004 PF00753 Metallo-beta-lactamase superfamily KAB05_03005 PF00005 ABC transporter KAB05_03006 PF02687 FtsX-like permease family KAB05_03006 PF12704 MacB-like periplasmic core domain KAB05_03008 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KAB05_03011 PF00266 Aminotransferase class-V KAB05_03013 PF13533 Biotin-lipoyl like KAB05_03017 PF00535 Glycosyl transferase family 2 KAB05_03020 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB05_03020 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB05_03021 PF00766 Electron transfer flavoprotein FAD-binding domain KAB05_03021 PF01012 Electron transfer flavoprotein domain KAB05_03022 PF01012 Electron transfer flavoprotein domain KAB05_03023 PF02899 Phage integrase, N-terminal SAM-like domain KAB05_03023 PF00589 Phage integrase family KAB05_03024 PF01810 LysE type translocator KAB05_03025 PF01678 Diaminopimelate epimerase KAB05_03026 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAB05_03026 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAB05_03028 PF00324 Amino acid permease KAB05_03029 PF18073 Rubredoxin metal binding domain KAB05_03031 PF00152 tRNA synthetases class II (D, K and N) KAB05_03032 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB05_03032 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB05_03032 PF11890 Domain of unknown function (DUF3410) KAB05_03033 PF06803 Protein of unknown function (DUF1232) KAB05_03034 PF02634 FdhD/NarQ family KAB05_03035 PF00384 Molybdopterin oxidoreductase KAB05_03036 PF02595 Glycerate kinase family KAB05_03039 PF00881 Nitroreductase family KAB05_03058 PF10124 Mu-like prophage major head subunit gpT KAB05_03061 PF05069 Phage virion morphogenesis family KAB05_03062 PF04233 Phage Mu protein F like protein KAB05_03063 PF06074 Protein of unknown function (DUF935) KAB05_03066 PF03237 Terminase-like family KAB05_03073 PF10502 Signal peptidase, peptidase S26 KAB05_03079 PF01471 Putative peptidoglycan binding domain KAB05_03079 PF13401 AAA domain KAB05_03085 PF00216 Bacterial DNA-binding protein KAB05_03093 PF00501 AMP-binding enzyme KAB05_03093 PF13193 AMP-binding enzyme C-terminal domain KAB05_03093 PF00668 Condensation domain KAB05_03093 PF00550 Phosphopantetheine attachment site KAB05_03093 PF00975 Thioesterase domain KAB05_03096 PF03449 Transcription elongation factor, N-terminal KAB05_03096 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB05_03097 PF01464 Transglycosylase SLT domain KAB05_03097 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB05_03099 PF01171 PP-loop family KAB05_03100 PF01464 Transglycosylase SLT domain KAB05_03103 PF01435 Peptidase family M48 KAB05_03105 PF00873 AcrB/AcrD/AcrF family KAB05_03106 PF00873 AcrB/AcrD/AcrF family KAB05_03107 PF03009 Glycerophosphoryl diester phosphodiesterase family KAB05_03109 PF01219 Prokaryotic diacylglycerol kinase KAB05_03110 PF00118 TCP-1/cpn60 chaperonin family KAB05_03111 PF00166 Chaperonin 10 Kd subunit KAB05_03113 PF00149 Calcineurin-like phosphoesterase KAB05_03114 PF00781 Diacylglycerol kinase catalytic domain KAB05_03115 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KAB05_03115 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KAB05_03116 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAB05_03116 PF01266 FAD dependent oxidoreductase KAB05_03117 PF01266 FAD dependent oxidoreductase KAB05_03117 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAB05_03118 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAB05_03118 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAB05_03119 PF00083 Sugar (and other) transporter KAB05_03122 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAB05_03122 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAB05_03125 PF16655 PhoD-like phosphatase, N-terminal domain KAB05_03125 PF09423 PhoD-like phosphatase KAB05_03129 PF00809 Pterin binding enzyme KAB05_03130 PF01434 Peptidase family M41 KAB05_03130 PF00004 ATPase family associated with various cellular activities (AAA) KAB05_03130 PF17862 AAA+ lid domain KAB05_03130 PF06480 FtsH Extracellular KAB05_03131 PF01728 FtsJ-like methyltransferase KAB05_03132 PF01985 CRS1 / YhbY (CRM) domain KAB05_03135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAB05_03135 PF00117 Glutamine amidotransferase class-I KAB05_03136 PF02142 MGS-like domain KAB05_03136 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB05_03136 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB05_03137 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB05_03137 PF03449 Transcription elongation factor, N-terminal KAB05_03138 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_03139 PF00582 Universal stress protein family KAB05_03140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB05_03142 PF09587 Bacterial capsule synthesis protein PGA_cap KAB05_03148 PF04228 Putative neutral zinc metallopeptidase KAB05_03149 PF05661 Protein of unknown function (DUF808) KAB05_03150 PF00579 tRNA synthetases class I (W and Y) KAB05_03151 PF00549 CoA-ligase KAB05_03151 PF02629 CoA binding domain KAB05_03152 PF00549 CoA-ligase KAB05_03152 PF08442 ATP-grasp domain KAB05_03153 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_03153 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB05_03154 PF02817 e3 binding domain KAB05_03154 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB05_03154 PF00364 Biotin-requiring enzyme KAB05_03155 PF16078 2-oxoglutarate dehydrogenase N-terminus KAB05_03155 PF02779 Transketolase, pyrimidine binding domain KAB05_03155 PF16870 2-oxoglutarate dehydrogenase C-terminal KAB05_03155 PF00676 Dehydrogenase E1 component KAB05_03156 PF13085 2Fe-2S iron-sulfur cluster binding domain KAB05_03157 PF00890 FAD binding domain KAB05_03157 PF02910 Fumarate reductase flavoprotein C-term KAB05_03158 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB05_03159 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB05_03160 PF00285 Citrate synthase, C-terminal domain KAB05_03166 PF04539 Sigma-70 region 3 KAB05_03166 PF04545 Sigma-70, region 4 KAB05_03166 PF03979 Sigma-70 factor, region 1.1 KAB05_03166 PF04546 Sigma-70, non-essential region KAB05_03166 PF04542 Sigma-70 region 2 KAB05_03166 PF00140 Sigma-70 factor, region 1.2 KAB05_03167 PF04359 Protein of unknown function (DUF493) KAB05_03168 PF03099 Biotin/lipoate A/B protein ligase family KAB05_03170 PF00465 Iron-containing alcohol dehydrogenase KAB05_03171 PF13520 Amino acid permease KAB05_03172 PF03358 NADPH-dependent FMN reductase KAB05_03173 PF01638 HxlR-like helix-turn-helix KAB05_03174 PF00588 SpoU rRNA Methylase family KAB05_03175 PF14824 Sirohaem biosynthesis protein central KAB05_03175 PF10414 Sirohaem synthase dimerisation region KAB05_03175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB05_03176 PF02403 Seryl-tRNA synthetase N-terminal domain KAB05_03176 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB05_03178 PF03548 Outer membrane lipoprotein carrier protein LolA KAB05_03179 PF01016 Ribosomal L27 protein KAB05_03180 PF00829 Ribosomal prokaryotic L21 protein KAB05_03181 PF00348 Polyprenyl synthetase KAB05_03183 PF01569 PAP2 superfamily KAB05_03184 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_03184 PF00529 HlyD membrane-fusion protein of T1SS KAB05_03185 PF00873 AcrB/AcrD/AcrF family KAB05_03186 PF02321 Outer membrane efflux protein KAB05_03187 PF01906 Putative heavy-metal-binding KAB05_03188 PF01906 Putative heavy-metal-binding KAB05_03192 PF10458 Valyl tRNA synthetase tRNA binding arm KAB05_03192 PF00133 tRNA synthetases class I (I, L, M and V) KAB05_03192 PF08264 Anticodon-binding domain of tRNA KAB05_03196 PF03466 LysR substrate binding domain KAB05_03196 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03197 PF00909 Ammonium Transporter Family KAB05_03199 PF08521 Two-component sensor kinase N-terminal KAB05_03199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03199 PF00512 His Kinase A (phospho-acceptor) domain KAB05_03200 PF00072 Response regulator receiver domain KAB05_03200 PF00486 Transcriptional regulatory protein, C terminal KAB05_03201 PF08019 Phosphoethanolamine transferase EptA/EptB KAB05_03201 PF00884 Sulfatase KAB05_03205 PF01734 Patatin-like phospholipase KAB05_03207 PF01145 SPFH domain / Band 7 family KAB05_03208 PF04237 YjbR KAB05_03209 PF00348 Polyprenyl synthetase KAB05_03210 PF04303 PrpF protein KAB05_03211 PF00324 Amino acid permease KAB05_03213 PF01965 DJ-1/PfpI family KAB05_03214 PF14765 Polyketide synthase dehydratase KAB05_03214 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB05_03214 PF00550 Phosphopantetheine attachment site KAB05_03214 PF08659 KR domain KAB05_03214 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB05_03214 PF16197 Ketoacyl-synthetase C-terminal extension KAB05_03214 PF09277 Erythronolide synthase, docking KAB05_03214 PF08990 Erythronolide synthase docking KAB05_03214 PF00698 Acyl transferase domain KAB05_03214 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_03215 PF06719 AraC-type transcriptional regulator N-terminus KAB05_03215 PF12833 Helix-turn-helix domain KAB05_03216 PF02673 Bacitracin resistance protein BacA KAB05_03220 PF02525 Flavodoxin-like fold KAB05_03223 PF01507 Phosphoadenosine phosphosulfate reductase family KAB05_03224 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KAB05_03224 PF06974 Protein of unknown function (DUF1298) KAB05_03226 PF10150 Ribonuclease E/G family KAB05_03226 PF00575 S1 RNA binding domain KAB05_03227 PF02545 Maf-like protein KAB05_03228 PF04093 rod shape-determining protein MreD KAB05_03229 PF04085 rod shape-determining protein MreC KAB05_03231 PF02686 Glu-tRNAGln amidotransferase C subunit KAB05_03232 PF01425 Amidase KAB05_03233 PF02934 GatB/GatE catalytic domain KAB05_03233 PF02637 GatB domain KAB05_03239 PF05992 SbmA/BacA-like family KAB05_03240 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_03240 PF13291 ACT domain KAB05_03241 PF01734 Patatin-like phospholipase KAB05_03242 PF01235 Sodium:alanine symporter family KAB05_03244 PF00881 Nitroreductase family KAB05_03245 PF07690 Major Facilitator Superfamily KAB05_03246 PF12805 FUSC-like inner membrane protein yccS KAB05_03248 PF00667 FAD binding domain KAB05_03248 PF00258 Flavodoxin KAB05_03248 PF00175 Oxidoreductase NAD-binding domain KAB05_03256 PF03734 L,D-transpeptidase catalytic domain KAB05_03256 PF17969 L,D-transpeptidase C-terminal domain KAB05_03257 PF04304 Protein of unknown function (DUF454) KAB05_03259 PF08085 Entericidin EcnA/B family KAB05_03260 PF07687 Peptidase dimerisation domain KAB05_03260 PF01546 Peptidase family M20/M25/M40 KAB05_03262 PF00072 Response regulator receiver domain KAB05_03263 PF07194 P2 response regulator binding domain KAB05_03263 PF07194 P2 response regulator binding domain KAB05_03263 PF01584 CheW-like domain KAB05_03263 PF02895 Signal transducing histidine kinase, homodimeric domain KAB05_03263 PF01627 Hpt domain KAB05_03263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03263 PF02895 Signal transducing histidine kinase, homodimeric domain KAB05_03263 PF01584 CheW-like domain KAB05_03263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03263 PF01627 Hpt domain KAB05_03264 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KAB05_03264 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAB05_03265 PF01584 CheW-like domain KAB05_03266 PF00072 Response regulator receiver domain KAB05_03267 PF00072 Response regulator receiver domain KAB05_03270 PF00873 AcrB/AcrD/AcrF family KAB05_03271 PF04073 Aminoacyl-tRNA editing domain KAB05_03271 PF03129 Anticodon binding domain KAB05_03271 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB05_03272 PF07411 Domain of unknown function (DUF1508) KAB05_03273 PF08274 PhnA Zinc-Ribbon KAB05_03273 PF03831 PhnA domain KAB05_03274 PF04343 Protein of unknown function, DUF488 KAB05_03276 PF01571 Aminomethyltransferase folate-binding domain KAB05_03277 PF10411 Disulfide bond isomerase protein N-terminus KAB05_03277 PF13098 Thioredoxin-like domain KAB05_03279 PF03547 Membrane transport protein KAB05_03280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_03281 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_03282 PF07715 TonB-dependent Receptor Plug Domain KAB05_03282 PF00593 TonB dependent receptor KAB05_03285 PF07715 TonB-dependent Receptor Plug Domain KAB05_03285 PF00593 TonB dependent receptor KAB05_03286 PF02245 Methylpurine-DNA glycosylase (MPG) KAB05_03287 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB05_03287 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KAB05_03287 PF06827 Zinc finger found in FPG and IleRS KAB05_03290 PF01741 Large-conductance mechanosensitive channel, MscL KAB05_03292 PF00860 Permease family KAB05_03293 PF08468 Methyltransferase small domain N-terminal KAB05_03293 PF05175 Methyltransferase small domain KAB05_03294 PF00324 Amino acid permease KAB05_03295 PF01139 tRNA-splicing ligase RtcB KAB05_03297 PF13505 Outer membrane protein beta-barrel domain KAB05_03297 PF00691 OmpA family KAB05_03299 PF00108 Thiolase, N-terminal domain KAB05_03299 PF02803 Thiolase, C-terminal domain KAB05_03301 PF00893 Small Multidrug Resistance protein KAB05_03303 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB05_03303 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB05_03304 PF01011 PQQ enzyme repeat KAB05_03305 PF04966 Carbohydrate-selective porin, OprB family KAB05_03306 PF02515 CoA-transferase family III KAB05_03307 PF02311 AraC-like ligand binding domain KAB05_03307 PF12833 Helix-turn-helix domain KAB05_03308 PF02803 Thiolase, C-terminal domain KAB05_03308 PF00108 Thiolase, N-terminal domain KAB05_03309 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB05_03309 PF00378 Enoyl-CoA hydratase/isomerase KAB05_03309 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB05_03315 PF03006 Haemolysin-III related KAB05_03316 PF07690 Major Facilitator Superfamily KAB05_03316 PF00083 Sugar (and other) transporter KAB05_03318 PF02810 SEC-C motif KAB05_03318 PF01043 SecA preprotein cross-linking domain KAB05_03318 PF07516 SecA Wing and Scaffold domain KAB05_03318 PF07517 SecA DEAD-like domain KAB05_03319 PF02810 SEC-C motif KAB05_03319 PF07516 SecA Wing and Scaffold domain KAB05_03319 PF01043 SecA preprotein cross-linking domain KAB05_03319 PF07517 SecA DEAD-like domain KAB05_03320 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB05_03320 PF00578 AhpC/TSA family KAB05_03321 PF00753 Metallo-beta-lactamase superfamily KAB05_03324 PF02875 Mur ligase family, glutamate ligase domain KAB05_03324 PF08245 Mur ligase middle domain KAB05_03325 PF01039 Carboxyl transferase domain KAB05_03326 PF00290 Tryptophan synthase alpha chain KAB05_03331 PF00291 Pyridoxal-phosphate dependent enzyme KAB05_03332 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAB05_03333 PF00593 TonB dependent receptor KAB05_03333 PF07715 TonB-dependent Receptor Plug Domain KAB05_03334 PF01923 Cobalamin adenosyltransferase KAB05_03338 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KAB05_03339 PF00072 Response regulator receiver domain KAB05_03339 PF00486 Transcriptional regulatory protein, C terminal KAB05_03340 PF00512 His Kinase A (phospho-acceptor) domain KAB05_03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03340 PF00672 HAMP domain KAB05_03342 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_03342 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_03342 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB05_03342 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_03343 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_03343 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB05_03343 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_03343 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_03344 PF03466 LysR substrate binding domain KAB05_03344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03345 PF00043 Glutathione S-transferase, C-terminal domain KAB05_03345 PF02798 Glutathione S-transferase, N-terminal domain KAB05_03346 PF06146 Phosphate-starvation-inducible E KAB05_03350 PF07715 TonB-dependent Receptor Plug Domain KAB05_03350 PF00593 TonB dependent receptor KAB05_03352 PF01336 OB-fold nucleic acid binding domain KAB05_03352 PF02938 GAD domain KAB05_03352 PF00152 tRNA synthetases class II (D, K and N) KAB05_03353 PF17102 Stealth protein CR3, conserved region 3 KAB05_03353 PF11380 Stealth protein CR2, conserved region 2 KAB05_03353 PF17101 Stealth protein CR1, conserved region 1 KAB05_03358 PF13439 Glycosyltransferase Family 4 KAB05_03358 PF00534 Glycosyl transferases group 1 KAB05_03359 PF00535 Glycosyl transferase family 2 KAB05_03360 PF01522 Polysaccharide deacetylase KAB05_03363 PF01063 Amino-transferase class IV KAB05_03364 PF08335 GlnD PII-uridylyltransferase KAB05_03364 PF03710 Glutamate-ammonia ligase adenylyltransferase KAB05_03365 PF00512 His Kinase A (phospho-acceptor) domain KAB05_03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03365 PF07689 KaiB domain KAB05_03367 PF02547 Queuosine biosynthesis protein KAB05_03370 PF01702 Queuine tRNA-ribosyltransferase KAB05_03371 PF02699 Preprotein translocase subunit KAB05_03372 PF07549 SecD/SecF GG Motif KAB05_03372 PF13721 SecD export protein N-terminal TM region KAB05_03372 PF02355 Protein export membrane protein KAB05_03373 PF07549 SecD/SecF GG Motif KAB05_03373 PF13721 SecD export protein N-terminal TM region KAB05_03373 PF02355 Protein export membrane protein KAB05_03374 PF02355 Protein export membrane protein KAB05_03374 PF07549 SecD/SecF GG Motif KAB05_03375 PF02441 Flavoprotein KAB05_03375 PF04127 DNA / pantothenate metabolism flavoprotein KAB05_03376 PF04002 RadC-like JAB domain KAB05_03377 PF01062 Bestrophin, RFP-TM, chloride channel KAB05_03378 PF02811 PHP domain KAB05_03379 PF04279 Intracellular septation protein A KAB05_03380 PF03795 YCII-related domain KAB05_03382 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB05_03382 PF01266 FAD dependent oxidoreductase KAB05_03384 PF04461 Protein of unknown function (DUF520) KAB05_03386 PF03061 Thioesterase superfamily KAB05_03387 PF00085 Thioredoxin KAB05_03388 PF00561 alpha/beta hydrolase fold KAB05_03389 PF00753 Metallo-beta-lactamase superfamily KAB05_03389 PF04273 Putative phosphatase (DUF442) KAB05_03391 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_03391 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB05_03398 PF00990 Diguanylate cyclase, GGDEF domain KAB05_03398 PF17152 Periplasmic sensor domain KAB05_03399 PF00691 OmpA family KAB05_03399 PF01389 OmpA-like transmembrane domain KAB05_03400 PF10518 TAT (twin-arginine translocation) pathway signal sequence KAB05_03400 PF00149 Calcineurin-like phosphoesterase KAB05_03401 PF13091 PLD-like domain KAB05_03403 PF01926 50S ribosome-binding GTPase KAB05_03403 PF13167 GTP-binding GTPase N-terminal KAB05_03403 PF16360 GTP-binding GTPase Middle Region KAB05_03407 PF00149 Calcineurin-like phosphoesterase KAB05_03408 PF00398 Ribosomal RNA adenine dimethylase KAB05_03409 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KAB05_03410 PF00572 Ribosomal protein L13 KAB05_03411 PF00380 Ribosomal protein S9/S16 KAB05_03412 PF00043 Glutathione S-transferase, C-terminal domain KAB05_03412 PF13417 Glutathione S-transferase, N-terminal domain KAB05_03413 PF04386 Stringent starvation protein B KAB05_03415 PF02785 Biotin carboxylase C-terminal domain KAB05_03415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB05_03415 PF00364 Biotin-requiring enzyme KAB05_03415 PF00289 Biotin carboxylase, N-terminal domain KAB05_03417 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_03417 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_03417 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_03418 PF01039 Carboxyl transferase domain KAB05_03421 PF00440 Bacterial regulatory proteins, tetR family KAB05_03421 PF17932 Tetracyclin repressor-like, C-terminal domain KAB05_03422 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_03422 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_03422 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_03432 PF01066 CDP-alcohol phosphatidyltransferase KAB05_03433 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KAB05_03437 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KAB05_03437 PF00056 lactate/malate dehydrogenase, NAD binding domain KAB05_03439 PF01464 Transglycosylase SLT domain KAB05_03439 PF01551 Peptidase family M23 KAB05_03439 PF10145 Phage-related minor tail protein KAB05_03440 PF01938 TRAM domain KAB05_03440 PF04055 Radical SAM superfamily KAB05_03440 PF00919 Uncharacterized protein family UPF0004 KAB05_03441 PF02562 PhoH-like protein KAB05_03442 PF02130 Uncharacterized protein family UPF0054 KAB05_03447 PF03358 NADPH-dependent FMN reductase KAB05_03448 PF03631 Virulence factor BrkB KAB05_03449 PF00892 EamA-like transporter family KAB05_03450 PF12833 Helix-turn-helix domain KAB05_03451 PF01557 Fumarylacetoacetate (FAA) hydrolase family KAB05_03460 PF00575 S1 RNA binding domain KAB05_03460 PF08461 Ribonuclease R winged-helix domain KAB05_03460 PF00773 RNB domain KAB05_03460 PF17876 Cold shock domain KAB05_03460 PF08206 Ribonuclease B OB domain KAB05_03461 PF01432 Peptidase family M3 KAB05_03462 PF09526 Probable metal-binding protein (DUF2387) KAB05_03469 PF03937 Flavinator of succinate dehydrogenase KAB05_03470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_03470 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_03470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_03471 PF00743 Flavin-binding monooxygenase-like KAB05_03472 PF01196 Ribosomal protein L17 KAB05_03473 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAB05_03473 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAB05_03473 PF01000 RNA polymerase Rpb3/RpoA insert domain KAB05_03474 PF01479 S4 domain KAB05_03474 PF00163 Ribosomal protein S4/S9 N-terminal domain KAB05_03475 PF00411 Ribosomal protein S11 KAB05_03476 PF00416 Ribosomal protein S13/S18 KAB05_03477 PF00444 Ribosomal protein L36 KAB05_03478 PF00344 SecY translocase KAB05_03479 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAB05_03480 PF00327 Ribosomal protein L30p/L7e KAB05_03481 PF00333 Ribosomal protein S5, N-terminal domain KAB05_03481 PF03719 Ribosomal protein S5, C-terminal domain KAB05_03482 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAB05_03483 PF00347 Ribosomal protein L6 KAB05_03484 PF00410 Ribosomal protein S8 KAB05_03485 PF00253 Ribosomal protein S14p/S29e KAB05_03486 PF00673 ribosomal L5P family C-terminus KAB05_03486 PF00281 Ribosomal protein L5 KAB05_03487 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAB05_03487 PF00467 KOW motif KAB05_03488 PF00238 Ribosomal protein L14p/L23e KAB05_03489 PF00366 Ribosomal protein S17 KAB05_03490 PF00831 Ribosomal L29 protein KAB05_03491 PF00252 Ribosomal protein L16p/L10e KAB05_03492 PF07650 KH domain KAB05_03492 PF00189 Ribosomal protein S3, C-terminal domain KAB05_03493 PF00237 Ribosomal protein L22p/L17e KAB05_03494 PF00203 Ribosomal protein S19 KAB05_03495 PF00181 Ribosomal Proteins L2, RNA binding domain KAB05_03495 PF03947 Ribosomal Proteins L2, C-terminal domain KAB05_03496 PF00276 Ribosomal protein L23 KAB05_03497 PF00573 Ribosomal protein L4/L1 family KAB05_03498 PF00297 Ribosomal protein L3 KAB05_03499 PF00338 Ribosomal protein S10p/S20e KAB05_03500 PF00117 Glutamine amidotransferase class-I KAB05_03502 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB05_03503 PF05872 Bacterial protein of unknown function (DUF853) KAB05_03504 PF00175 Oxidoreductase NAD-binding domain KAB05_03504 PF00042 Globin KAB05_03504 PF00970 Oxidoreductase FAD-binding domain KAB05_03505 PF02082 Transcriptional regulator KAB05_03506 PF01926 50S ribosome-binding GTPase KAB05_03508 PF00375 Sodium:dicarboxylate symporter family KAB05_03510 PF01553 Acyltransferase KAB05_03513 PF00271 Helicase conserved C-terminal domain KAB05_03513 PF00270 DEAD/DEAH box helicase KAB05_03513 PF17191 RecG wedge domain KAB05_03514 PF00156 Phosphoribosyl transferase domain KAB05_03515 PF00293 NUDIX domain KAB05_03516 PF03641 Possible lysine decarboxylase KAB05_03517 PF01544 CorA-like Mg2+ transporter protein KAB05_03519 PF05494 MlaC protein KAB05_03521 PF02405 Permease MlaE KAB05_03522 PF00005 ABC transporter KAB05_03523 PF12343 Cold shock protein DEAD box A KAB05_03523 PF00271 Helicase conserved C-terminal domain KAB05_03523 PF00270 DEAD/DEAH box helicase KAB05_03523 PF03880 DbpA RNA binding domain KAB05_03524 PF00459 Inositol monophosphatase family KAB05_03525 PF02779 Transketolase, pyrimidine binding domain KAB05_03525 PF02780 Transketolase, C-terminal domain KAB05_03525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAB05_03526 PF00925 GTP cyclohydrolase II KAB05_03527 PF01218 Coproporphyrinogen III oxidase KAB05_03528 PF01488 Shikimate / quinate 5-dehydrogenase KAB05_03528 PF08501 Shikimate dehydrogenase substrate binding domain KAB05_03528 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAB05_03530 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB05_03530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB05_03530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB05_03530 PF02770 Acyl-CoA dehydrogenase, middle domain KAB05_03532 PF04024 PspC domain KAB05_03533 PF00571 CBS domain KAB05_03538 PF02091 Glycyl-tRNA synthetase alpha subunit KAB05_03539 PF02092 Glycyl-tRNA synthetase beta subunit KAB05_03539 PF05746 DALR anticodon binding domain KAB05_03541 PF00892 EamA-like transporter family KAB05_03542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03542 PF03466 LysR substrate binding domain KAB05_03548 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KAB05_03549 PF04996 Succinylarginine dihydrolase KAB05_03550 PF00171 Aldehyde dehydrogenase family KAB05_03551 PF04958 Arginine N-succinyltransferase beta subunit KAB05_03552 PF00202 Aminotransferase class-III KAB05_03553 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB05_03553 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB05_03554 PF00324 Amino acid permease KAB05_03561 PF01594 AI-2E family transporter KAB05_03562 PF00080 Copper/zinc superoxide dismutase (SODC) KAB05_03563 PF12805 FUSC-like inner membrane protein yccS KAB05_03564 PF07690 Major Facilitator Superfamily KAB05_03566 PF02525 Flavodoxin-like fold KAB05_03567 PF03992 Antibiotic biosynthesis monooxygenase KAB05_03569 PF02913 FAD linked oxidases, C-terminal domain KAB05_03569 PF01565 FAD binding domain KAB05_03570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB05_03570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB05_03571 PF00892 EamA-like transporter family KAB05_03572 PF00892 EamA-like transporter family KAB05_03574 PF01925 Sulfite exporter TauE/SafE KAB05_03575 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAB05_03575 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAB05_03575 PF09157 Pseudouridine synthase II TruB, C-terminal KAB05_03576 PF03280 Proteobacterial lipase chaperone protein KAB05_03577 PF00561 alpha/beta hydrolase fold KAB05_03578 PF01245 Ribosomal protein L19 KAB05_03579 PF01746 tRNA (Guanine-1)-methyltransferase KAB05_03580 PF05239 PRC-barrel domain KAB05_03580 PF01782 RimM N-terminal domain KAB05_03581 PF00886 Ribosomal protein S16 KAB05_03591 PF02401 LytB protein KAB05_03592 PF00625 Guanylate kinase KAB05_03593 PF01192 RNA polymerase Rpb6 KAB05_03594 PF02824 TGS domain KAB05_03594 PF04607 Region found in RelA / SpoT proteins KAB05_03594 PF13291 ACT domain KAB05_03595 PF01042 Endoribonuclease L-PSP KAB05_03596 PF04324 BFD-like [2Fe-2S] binding domain KAB05_03597 PF00210 Ferritin-like domain KAB05_03598 PF11846 Virulence factor membrane-bound polymerase, C-terminal KAB05_03598 PF04932 O-Antigen ligase KAB05_03598 PF15864 Protein glycosylation ligase KAB05_03600 PF00114 Pilin (bacterial filament) KAB05_03600 PF07963 Prokaryotic N-terminal methylation motif KAB05_03602 PF04536 TPM domain KAB05_03603 PF04011 LemA family KAB05_03606 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB05_03606 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAB05_03607 PF01493 GXGXG motif KAB05_03607 PF01645 Conserved region in glutamate synthase KAB05_03607 PF04898 Glutamate synthase central domain KAB05_03607 PF00310 Glutamine amidotransferases class-II KAB05_03609 PF01761 3-dehydroquinate synthase KAB05_03610 PF01202 Shikimate kinase KAB05_03611 PF11741 AMIN domain KAB05_03611 PF00263 Bacterial type II and III secretion system protein KAB05_03611 PF03958 Bacterial type II/III secretion system short domain KAB05_03611 PF07660 Secretin and TonB N terminus short domain KAB05_03616 PF00912 Transglycosylase KAB05_03616 PF17092 Penicillin-binding protein OB-like domain KAB05_03616 PF00905 Penicillin binding protein transpeptidase domain KAB05_03617 PF13847 Methyltransferase domain KAB05_03619 PF00953 Glycosyl transferase family 4 KAB05_03620 PF08245 Mur ligase middle domain KAB05_03620 PF02875 Mur ligase family, glutamate ligase domain KAB05_03620 PF01225 Mur ligase family, catalytic domain KAB05_03621 PF01225 Mur ligase family, catalytic domain KAB05_03621 PF02875 Mur ligase family, glutamate ligase domain KAB05_03621 PF08245 Mur ligase middle domain KAB05_03622 PF03717 Penicillin-binding Protein dimerisation domain KAB05_03622 PF00905 Penicillin binding protein transpeptidase domain KAB05_03624 PF01795 MraW methylase family KAB05_03627 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB05_03630 PF00324 Amino acid permease KAB05_03636 PF01545 Cation efflux family KAB05_03637 PF00873 AcrB/AcrD/AcrF family KAB05_03638 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_03638 PF00529 HlyD membrane-fusion protein of T1SS KAB05_03641 PF04191 Phospholipid methyltransferase KAB05_03646 PF00005 ABC transporter KAB05_03646 PF12848 ABC transporter KAB05_03647 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB05_03648 PF00106 short chain dehydrogenase KAB05_03649 PF00916 Sulfate permease family KAB05_03649 PF01740 STAS domain KAB05_03650 PF17674 HHH domain KAB05_03650 PF00575 S1 RNA binding domain KAB05_03650 PF09371 Tex-like protein N-terminal domain KAB05_03650 PF16921 Tex protein YqgF-like domain KAB05_03651 PF00072 Response regulator receiver domain KAB05_03651 PF00486 Transcriptional regulatory protein, C terminal KAB05_03652 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03652 PF00672 HAMP domain KAB05_03652 PF00512 His Kinase A (phospho-acceptor) domain KAB05_03653 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KAB05_03653 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KAB05_03654 PF00583 Acetyltransferase (GNAT) family KAB05_03658 PF00475 Imidazoleglycerol-phosphate dehydratase KAB05_03659 PF00117 Glutamine amidotransferase class-I KAB05_03662 PF00977 Histidine biosynthesis protein KAB05_03665 PF03992 Antibiotic biosynthesis monooxygenase KAB05_03668 PF01636 Phosphotransferase enzyme family KAB05_03669 PF00977 Histidine biosynthesis protein KAB05_03672 PF00230 Major intrinsic protein KAB05_03677 PF02705 K+ potassium transporter KAB05_03681 PF02525 Flavodoxin-like fold KAB05_03682 PF01638 HxlR-like helix-turn-helix KAB05_03687 PF12833 Helix-turn-helix domain KAB05_03687 PF02311 AraC-like ligand binding domain KAB05_03688 PF00248 Aldo/keto reductase family KAB05_03692 PF03466 LysR substrate binding domain KAB05_03692 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03693 PF07690 Major Facilitator Superfamily KAB05_03698 PF01593 Flavin containing amine oxidoreductase KAB05_03699 PF02678 Pirin KAB05_03699 PF05726 Pirin C-terminal cupin domain KAB05_03700 PF00857 Isochorismatase family KAB05_03701 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03702 PF00171 Aldehyde dehydrogenase family KAB05_03703 PF00202 Aminotransferase class-III KAB05_03704 PF00392 Bacterial regulatory proteins, gntR family KAB05_03704 PF00155 Aminotransferase class I and II KAB05_03705 PF00324 Amino acid permease KAB05_03707 PF03591 AzlC protein KAB05_03709 PF00436 Single-strand binding protein family KAB05_03710 PF07690 Major Facilitator Superfamily KAB05_03712 PF08543 Phosphomethylpyrimidine kinase KAB05_03712 PF02581 Thiamine monophosphate synthase KAB05_03712 PF03070 TENA/THI-4/PQQC family KAB05_03713 PF06942 GlpM protein KAB05_03715 PF00107 Zinc-binding dehydrogenase KAB05_03715 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_03716 PF00440 Bacterial regulatory proteins, tetR family KAB05_03716 PF16925 Tetracyclin repressor-like, C-terminal domain KAB05_03717 PF17755 UvrA DNA-binding domain KAB05_03717 PF17760 UvrA interaction domain KAB05_03717 PF00005 ABC transporter KAB05_03719 PF17158 Membrane-associated sensor, integral membrane domain KAB05_03719 PF00990 Diguanylate cyclase, GGDEF domain KAB05_03721 PF02028 BCCT, betaine/carnitine/choline family transporter KAB05_03723 PF00474 Sodium:solute symporter family KAB05_03724 PF04341 Protein of unknown function, DUF485 KAB05_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03725 PF00672 HAMP domain KAB05_03725 PF00512 His Kinase A (phospho-acceptor) domain KAB05_03725 PF01627 Hpt domain KAB05_03725 PF00072 Response regulator receiver domain KAB05_03727 PF00196 Bacterial regulatory proteins, luxR family KAB05_03727 PF00072 Response regulator receiver domain KAB05_03728 PF03358 NADPH-dependent FMN reductase KAB05_03729 PF00296 Luciferase-like monooxygenase KAB05_03730 PF00872 Transposase, Mutator family KAB05_03731 PF01037 Lrp/AsnC ligand binding domain KAB05_03732 PF00857 Isochorismatase family KAB05_03733 PF00501 AMP-binding enzyme KAB05_03733 PF13193 AMP-binding enzyme C-terminal domain KAB05_03733 PF16177 Acetyl-coenzyme A synthetase N-terminus KAB05_03735 PF00924 Mechanosensitive ion channel KAB05_03736 PF04452 RNA methyltransferase KAB05_03737 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAB05_03738 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB05_03741 PF03462 PCRF domain KAB05_03741 PF00472 RF-1 domain KAB05_03743 PF02272 DHHA1 domain KAB05_03743 PF17768 RecJ OB domain KAB05_03743 PF01368 DHH family KAB05_03744 PF01243 Pyridoxamine 5'-phosphate oxidase KAB05_03744 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KAB05_03745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB05_03745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB05_03745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB05_03745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB05_03746 PF00571 CBS domain KAB05_03746 PF00478 IMP dehydrogenase / GMP reductase domain KAB05_03747 PF03692 Putative zinc- or iron-chelating domain KAB05_03748 PF00258 Flavodoxin KAB05_03748 PF01613 Flavin reductase like domain KAB05_03749 PF07715 TonB-dependent Receptor Plug Domain KAB05_03749 PF00593 TonB dependent receptor KAB05_03750 PF01169 Uncharacterized protein family UPF0016 KAB05_03752 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB05_03752 PF02817 e3 binding domain KAB05_03752 PF00364 Biotin-requiring enzyme KAB05_03753 PF00456 Transketolase, thiamine diphosphate binding domain KAB05_03753 PF17831 Pyruvate dehydrogenase E1 component middle domain KAB05_03754 PF01551 Peptidase family M23 KAB05_03756 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAB05_03757 PF00091 Tubulin/FtsZ family, GTPase domain KAB05_03757 PF12327 FtsZ family, C-terminal domain KAB05_03758 PF02491 SHS2 domain inserted in FTSA KAB05_03759 PF08478 POTRA domain, FtsQ-type KAB05_03759 PF03799 Cell division protein FtsQ KAB05_03760 PF01820 D-ala D-ala ligase N-terminus KAB05_03760 PF07478 D-ala D-ala ligase C-terminus KAB05_03761 PF01225 Mur ligase family, catalytic domain KAB05_03761 PF08245 Mur ligase middle domain KAB05_03761 PF02875 Mur ligase family, glutamate ligase domain KAB05_03762 PF04101 Glycosyltransferase family 28 C-terminal domain KAB05_03762 PF03033 Glycosyltransferase family 28 N-terminal domain KAB05_03763 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KAB05_03763 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KAB05_03765 PF07715 TonB-dependent Receptor Plug Domain KAB05_03765 PF00593 TonB dependent receptor KAB05_03766 PF00156 Phosphoribosyl transferase domain KAB05_03767 PF03372 Endonuclease/Exonuclease/phosphatase family KAB05_03768 PF03960 ArsC family KAB05_03770 PF07859 alpha/beta hydrolase fold KAB05_03771 PF00990 Diguanylate cyclase, GGDEF domain KAB05_03771 PF07694 5TMR of 5TMR-LYT KAB05_03772 PF11412 Disulphide bond corrector protein DsbC KAB05_03772 PF02683 Cytochrome C biogenesis protein transmembrane region KAB05_03778 PF00576 HIUase/Transthyretin family KAB05_03779 PF00860 Permease family KAB05_03781 PF01494 FAD binding domain KAB05_03782 PF03561 Allantoicase repeat KAB05_03783 PF04115 Ureidoglycolate lyase KAB05_03784 PF00106 short chain dehydrogenase KAB05_03785 PF01751 Toprim domain KAB05_03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03785 PF00204 DNA gyrase B KAB05_03785 PF00986 DNA gyrase B subunit, carboxyl terminus KAB05_03786 PF00204 DNA gyrase B KAB05_03786 PF01751 Toprim domain KAB05_03786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03786 PF00986 DNA gyrase B subunit, carboxyl terminus KAB05_03787 PF05728 Uncharacterised protein family (UPF0227) KAB05_03790 PF01476 LysM domain KAB05_03790 PF00877 NlpC/P60 family KAB05_03791 PF04717 Type VI secretion system, phage-baseplate injector KAB05_03792 PF02600 Disulfide bond formation protein DsbB KAB05_03793 PF04262 Glutamate-cysteine ligase KAB05_03796 PF04286 Protein of unknown function (DUF445) KAB05_03797 PF00155 Aminotransferase class I and II KAB05_03798 PF01554 MatE KAB05_03799 PF00106 short chain dehydrogenase KAB05_03801 PF00072 Response regulator receiver domain KAB05_03801 PF00486 Transcriptional regulatory protein, C terminal KAB05_03802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB05_03802 PF00989 PAS fold KAB05_03802 PF00512 His Kinase A (phospho-acceptor) domain KAB05_03802 PF11808 Phosphate regulon sensor protein PhoR KAB05_03806 PF03069 Acetamidase/Formamidase family KAB05_03807 PF02666 Phosphatidylserine decarboxylase KAB05_03808 PF00581 Rhodanese-like domain KAB05_03809 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAB05_03809 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB05_03810 PF02580 D-Tyr-tRNA(Tyr) deacylase KAB05_03815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB05_03815 PF00925 GTP cyclohydrolase II KAB05_03816 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAB05_03817 PF01029 NusB family KAB05_03818 PF02769 AIR synthase related protein, C-terminal domain KAB05_03818 PF00586 AIR synthase related protein, N-terminal domain KAB05_03819 PF04608 Phosphatidylglycerophosphatase A KAB05_03820 PF14602 Hexapeptide repeat of succinyl-transferase KAB05_03820 PF12804 MobA-like NTP transferase domain KAB05_03820 PF00132 Bacterial transferase hexapeptide (six repeats) KAB05_03821 PF01380 SIS domain KAB05_03822 PF01177 Asp/Glu/Hydantoin racemase KAB05_03825 PF00491 Arginase family KAB05_03826 PF01979 Amidohydrolase family KAB05_03827 PF00324 Amino acid permease KAB05_03828 PF00221 Aromatic amino acid lyase KAB05_03829 PF17392 Urocanase C-terminal domain KAB05_03829 PF17391 Urocanase N-terminal domain KAB05_03829 PF01175 Urocanase Rossmann-like domain KAB05_03830 PF05962 HutD KAB05_03831 PF00392 Bacterial regulatory proteins, gntR family KAB05_03831 PF07702 UTRA domain KAB05_03833 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB05_03833 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB05_03835 PF00324 Amino acid permease KAB05_03837 PF02798 Glutathione S-transferase, N-terminal domain KAB05_03837 PF14497 Glutathione S-transferase, C-terminal domain KAB05_03838 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB05_03840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB05_03841 PF04463 Protein of unknown function (DUF523) KAB05_03842 PF01554 MatE KAB05_03843 PF01758 Sodium Bile acid symporter family KAB05_03844 PF00857 Isochorismatase family KAB05_03845 PF00701 Dihydrodipicolinate synthetase family KAB05_03847 PF01259 SAICAR synthetase KAB05_03849 PF01226 Formate/nitrite transporter KAB05_03850 PF12002 MgsA AAA+ ATPase C terminal KAB05_03850 PF16193 AAA C-terminal domain KAB05_03850 PF00004 ATPase family associated with various cellular activities (AAA) KAB05_03851 PF07995 Glucose / Sorbosone dehydrogenase KAB05_03852 PF03692 Putative zinc- or iron-chelating domain KAB05_03853 PF07043 Protein of unknown function (DUF1328) KAB05_03856 PF00633 Helix-hairpin-helix motif KAB05_03856 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB05_03856 PF10576 Iron-sulfur binding domain of endonuclease III KAB05_03856 PF14815 NUDIX domain KAB05_03859 PF03352 Methyladenine glycosylase KAB05_03860 PF08240 Alcohol dehydrogenase GroES-like domain KAB05_03860 PF00107 Zinc-binding dehydrogenase KAB05_03861 PF00155 Aminotransferase class I and II KAB05_03861 PF00392 Bacterial regulatory proteins, gntR family KAB05_03863 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03863 PF03466 LysR substrate binding domain KAB05_03864 PF00248 Aldo/keto reductase family KAB05_03865 PF07690 Major Facilitator Superfamily KAB05_03867 PF05173 Dihydrodipicolinate reductase, C-terminus KAB05_03867 PF01113 Dihydrodipicolinate reductase, N-terminus KAB05_03869 PF00226 DnaJ domain KAB05_03869 PF00684 DnaJ central domain KAB05_03869 PF01556 DnaJ C terminal domain KAB05_03871 PF00873 AcrB/AcrD/AcrF family KAB05_03872 PF00873 AcrB/AcrD/AcrF family KAB05_03873 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB05_03874 PF08361 MAATS-type transcriptional repressor, C-terminal region KAB05_03874 PF00440 Bacterial regulatory proteins, tetR family KAB05_03875 PF00311 Phosphoenolpyruvate carboxylase KAB05_03876 PF00860 Permease family KAB05_03877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB05_03877 PF03466 LysR substrate binding domain KAB05_03880 PF00920 Dehydratase family KAB05_03881 PF02911 Formyl transferase, C-terminal domain KAB05_03881 PF00551 Formyl transferase KAB05_03882 PF01189 16S rRNA methyltransferase RsmB/F KAB05_03882 PF01029 NusB family KAB05_03886 PF00209 Sodium:neurotransmitter symporter family KAB05_03902 PF00684 DnaJ central domain KAB05_03902 PF01556 DnaJ C terminal domain KAB05_03902 PF00226 DnaJ domain KAB05_03909 PF18272 single-stranded DNA binding TraI N-terminal subdomain KAB05_03909 PF18340 DNA relaxase TraI 2B/2B-like domain KAB05_03909 PF07057 DNA helicase TraI KAB05_03909 PF08751 TrwC relaxase KAB05_03917 PF00239 Resolvase, N terminal domain KAB05_03917 PF02796 Helix-turn-helix domain of resolvase KAB05_03920 PF01464 Transglycosylase SLT domain KAB05_03928 PF13098 Thioredoxin-like domain KAB05_03928 PF10411 Disulfide bond isomerase protein N-terminus KAB05_03935 PF06834 TraU protein KAB05_03938 PF06986 Type-1V conjugative transfer system mating pair stabilisation KAB05_03941 PF06122 Conjugative relaxosome accessory transposon protein KAB05_03945 PF11799 impB/mucB/samB family C-terminal domain KAB05_03945 PF00817 impB/mucB/samB family KAB05_03945 PF13438 Domain of unknown function (DUF4113) KAB05_03963 PF00565 Staphylococcal nuclease homologue KAB05_03964 PF00816 H-NS histone family KAB05_03975 PF13614 AAA domain KAB05_03976 PF02195 ParB-like nuclease domain KAB05_03976 PF17762 HTH domain found in ParB protein KAB05_03980 PF05816 Toxic anion resistance protein (TelA)