KAB05_00008 SM00382 ATPases associated with a variety of cellular activities KAB05_00011 SM00387 Histidine kinase-like ATPases KAB05_00011 SM00433 TopoisomeraseII KAB05_00013 SM00480 DNA polymerase III beta subunit KAB05_00014 SM00382 ATPases associated with a variety of cellular activities KAB05_00014 SM00760 Bacterial dnaA protein helix-turn-helix domain KAB05_00017 SM01234 KAB05_00017 KAB05_00031 SM00014 Acid phosphatase homologues KAB05_00035 SM01001 AIR carboxylase KAB05_00039 SM00235 Zinc-dependent metalloprotease KAB05_00040 SM00235 Zinc-dependent metalloprotease KAB05_00059 SM00904 Riboflavin kinase KAB05_00063 SM00382 ATPases associated with a variety of cellular activities KAB05_00066 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_00067 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_00083 SM00644 KAB05_00083 KAB05_00088 SM00226 Low molecular weight phosphatase family KAB05_00092 SM00984 UDP binding domain KAB05_00098 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB05_00114 SM00984 UDP binding domain KAB05_00119 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_00119 SM00895 KAB05_00119 KAB05_00123 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_00123 SM00895 KAB05_00123 KAB05_00132 SM00671 Sel1-like repeats. KAB05_00143 SM00344 helix_turn_helix ASNC type KAB05_00145 SM01005 Alanine racemase, C-terminal domain KAB05_00159 SM00421 helix_turn_helix, Lux Regulon KAB05_00162 SM00823 Phosphopantetheine attachment site KAB05_00162 SM01294 KAB05_00162 KAB05_00164 SM00823 Phosphopantetheine attachment site KAB05_00164 SM00824 Thioesterase KAB05_00187 SM00836 DALR anticodon binding domain KAB05_00187 SM01016 Arginyl tRNA synthetase N terminal dom KAB05_00188 SM00919 Malic enzyme, NAD binding domain KAB05_00188 SM01274 KAB05_00188 KAB05_00193 SM00382 ATPases associated with a variety of cellular activities KAB05_00203 SM00382 ATPases associated with a variety of cellular activities KAB05_00207 SM00342 helix_turn_helix, arabinose operon control protein KAB05_00230 SM00422 helix_turn_helix, mercury resistance KAB05_00232 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_00236 SM00641 Glycosyl hydrolases family 25 KAB05_00239 SM01091 Transporter associated domain KAB05_00243 SM00434 DNA Topoisomerase IV KAB05_00251 SM01130 KAB05_00251 KAB05_00252 SM01007 Class II Aldolase and Adducin N-terminal domain KAB05_00253 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_00257 SM00382 ATPases associated with a variety of cellular activities KAB05_00265 SM00938 Nitrogen regulatory protein P-II KAB05_00278 SM00245 tail specific protease KAB05_00279 SM00382 ATPases associated with a variety of cellular activities KAB05_00279 SM00448 cheY-homologous receiver domain KAB05_00280 SM00387 Histidine kinase-like ATPases KAB05_00280 SM00388 His Kinase A (phosphoacceptor) domain KAB05_00281 SM00421 helix_turn_helix, Lux Regulon KAB05_00281 SM00448 cheY-homologous receiver domain KAB05_00287 SM00899 KAB05_00287 KAB05_00307 SM00448 cheY-homologous receiver domain KAB05_00307 SM00850 LytTr DNA-binding domain KAB05_00314 SM00528 Domain in histone-like proteins of HNS family KAB05_00317 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB05_00319 SM00240 Forkhead associated domain KAB05_00329 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KAB05_00329 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KAB05_00330 SM00649 Ribosomal protein L11/L12 KAB05_00335 SM00663 RNA polymerase I subunit A N-terminus KAB05_00343 SM00387 Histidine kinase-like ATPases KAB05_00348 SM00422 helix_turn_helix, mercury resistance KAB05_00358 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB05_00358 SM00465 GIY-YIG type nucleases (URI domain) KAB05_00361 SM00342 helix_turn_helix, arabinose operon control protein KAB05_00363 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_00367 SM00732 Likely ribonuclease with RNase H fold. KAB05_00372 SM00967 RNA 2'-O ribose methyltransferase substrate binding KAB05_00384 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_00408 SM00382 ATPases associated with a variety of cellular activities KAB05_00410 SM01387 KAB05_00410 KAB05_00411 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_00411 SM00322 K homology RNA-binding domain KAB05_00414 SM00271 DnaJ molecular chaperone homology domain KAB05_00418 SM00487 DEAD-like helicases superfamily KAB05_00418 SM00490 helicase superfamily c-terminal domain KAB05_00424 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB05_00424 SM01091 Transporter associated domain KAB05_00431 SM00849 Metallo-beta-lactamase superfamily KAB05_00444 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_00450 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_00451 SM00363 S4 RNA-binding domain KAB05_00459 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KAB05_00469 SM01329 KAB05_00469 KAB05_00472 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_00473 SM00342 helix_turn_helix, arabinose operon control protein KAB05_00475 SM00870 KAB05_00475 KAB05_00478 SM00859 Semialdehyde dehydrogenase, NAD binding domain KAB05_00484 SM00382 ATPases associated with a variety of cellular activities KAB05_00486 SM00829 Enoylreductase KAB05_00489 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KAB05_00489 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KAB05_00489 SM00493 KAB05_00489 KAB05_00493 SM00360 RNA recognition motif KAB05_00521 SM00671 Sel1-like repeats. KAB05_00524 SM00917 LeuA allosteric (dimerisation) domain KAB05_00525 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. KAB05_00530 SM00382 ATPases associated with a variety of cellular activities KAB05_00530 SM00994 ClpX C4-type zinc finger KAB05_00530 SM01086 C-terminal, D2-small domain, of ClpB protein KAB05_00546 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB05_00546 SM00245 tail specific protease KAB05_00548 SM00014 Acid phosphatase homologues KAB05_00550 SM00562 KAB05_00550 KAB05_00552 SM00028 Tetratricopeptide repeats KAB05_00557 SM00564 beta-propeller repeat KAB05_00560 SM00563 Phosphate acyltransferases KAB05_00573 SM00825 Beta-ketoacyl synthase KAB05_00575 SM00822 KAB05_00575 KAB05_00576 SM00825 Beta-ketoacyl synthase KAB05_00581 SM00450 Rhodanese Homology Domain KAB05_00583 SM00479 KAB05_00583 KAB05_00587 SM00382 ATPases associated with a variety of cellular activities KAB05_00596 SM00052 Putative diguanylate phosphodiesterase KAB05_00596 SM00267 diguanylate cyclase KAB05_00599 SM01236 KAB05_00599 KAB05_00614 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KAB05_00614 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KAB05_00622 SM00073 Histidine Phosphotransfer domain KAB05_00622 SM00387 Histidine kinase-like ATPases KAB05_00622 SM00388 His Kinase A (phosphoacceptor) domain KAB05_00622 SM00448 cheY-homologous receiver domain KAB05_00626 SM00954 Region found in RelA / SpoT proteins KAB05_00629 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB05_00639 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KAB05_00650 SM00873 B3/4 domain KAB05_00651 SM00874 tRNA synthetase B5 domain KAB05_00651 SM00896 Ferredoxin-fold anticodon binding domain KAB05_00652 SM00411 bacterial (prokaryotic) histone like domain KAB05_00654 SM00357 Cold shock protein domain KAB05_00654 SM00382 ATPases associated with a variety of cellular activities KAB05_00654 SM00959 Rho termination factor, N-terminal domain KAB05_00658 SM00977 TilS substrate C-terminal domain KAB05_00661 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KAB05_00661 SM00474 3'-5' exonuclease KAB05_00661 SM00475 5'-3' exonuclease KAB05_00661 SM00482 DNA polymerase A domain KAB05_00665 SM00382 ATPases associated with a variety of cellular activities KAB05_00667 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB05_00671 SM00331 Sigma factor PP2C-like phosphatases KAB05_00731 SM00342 helix_turn_helix, arabinose operon control protein KAB05_00737 SM00903 Flavin reductase like domain KAB05_00744 SM00974 KAB05_00744 KAB05_00758 SM00564 beta-propeller repeat KAB05_00772 SM00387 Histidine kinase-like ATPases KAB05_00776 SM00448 cheY-homologous receiver domain KAB05_00776 SM00862 Transcriptional regulatory protein, C terminal KAB05_00777 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB05_00777 SM00387 Histidine kinase-like ATPases KAB05_00777 SM00388 His Kinase A (phosphoacceptor) domain KAB05_00779 SM00267 diguanylate cyclase KAB05_00784 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB05_00785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KAB05_00785 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB05_00794 SM00357 Cold shock protein domain KAB05_00823 SM00382 ATPases associated with a variety of cellular activities KAB05_00823 SM00962 SRP54-type protein, GTPase domain KAB05_00823 SM00963 SRP54-type protein, helical bundle domain KAB05_00827 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_00829 SM00771 ZipA, C-terminal domain (FtsZ-binding) KAB05_00830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB05_00830 SM00292 breast cancer carboxy-terminal domain KAB05_00830 SM00532 Ligase N family KAB05_00840 SM00363 S4 RNA-binding domain KAB05_00847 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KAB05_00848 SM00822 KAB05_00848 KAB05_00850 SM00257 Lysin motif KAB05_00859 SM01400 KAB05_00859 KAB05_00865 SM00028 Tetratricopeptide repeats KAB05_00867 SM00400 zinc finger KAB05_00867 SM00493 KAB05_00867 KAB05_00869 SM00363 S4 RNA-binding domain KAB05_00878 SM01329 KAB05_00878 KAB05_00891 SM00825 Beta-ketoacyl synthase KAB05_00895 SM00838 Elongation factor G C-terminus KAB05_00895 SM00889 Elongation factor G, domain IV KAB05_00903 SM00843 KAB05_00903 KAB05_00912 SM00563 Phosphate acyltransferases KAB05_00927 SM00382 ATPases associated with a variety of cellular activities KAB05_00936 SM01004 Delta-aminolevulinic acid dehydratase KAB05_00948 SM00479 KAB05_00948 KAB05_00971 SM00382 ATPases associated with a variety of cellular activities KAB05_00975 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01024 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01039 SM00382 ATPases associated with a variety of cellular activities KAB05_01047 SM01130 KAB05_01047 KAB05_01051 SM00965 Secretin and TonB N terminus short domain KAB05_01074 SM01322 KAB05_01074 KAB05_01082 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_01086 SM00822 KAB05_01086 KAB05_01101 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01106 SM00822 KAB05_01106 KAB05_01109 SM00861 Transketolase, pyrimidine binding domain KAB05_01110 SM01018 B12 binding domain KAB05_01122 SM00947 Carbonic anhydrase KAB05_01124 SM00382 ATPases associated with a variety of cellular activities KAB05_01144 SM01091 Transporter associated domain KAB05_01154 SM00988 UreE urease accessory protein, N-terminal domain KAB05_01163 SM00478 endonuclease III KAB05_01165 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB05_01169 SM00382 ATPases associated with a variety of cellular activities KAB05_01169 SM00464 Found in ATP-dependent protease La (LON) KAB05_01191 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01229 SM00287 Bacterial SH3 domain homologues KAB05_01236 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01255 SM01011 Aminopeptidase P, N-terminal domain KAB05_01259 SM00422 helix_turn_helix, mercury resistance KAB05_01270 SM00479 KAB05_01270 KAB05_01271 SM00257 Lysin motif KAB05_01275 SM00382 ATPases associated with a variety of cellular activities KAB05_01279 SM00479 KAB05_01279 KAB05_01281 SM00267 diguanylate cyclase KAB05_01310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KAB05_01311 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB05_01313 SM00788 Adenylosuccinate synthetase KAB05_01319 SM00100 Cyclic nucleotide-monophosphate binding domain KAB05_01319 SM00419 helix_turn_helix, cAMP Regulatory protein KAB05_01323 SM00382 ATPases associated with a variety of cellular activities KAB05_01323 SM01086 C-terminal, D2-small domain, of ClpB protein KAB05_01326 SM00981 KAB05_01326 KAB05_01342 SM00382 ATPases associated with a variety of cellular activities KAB05_01342 SM00487 DEAD-like helicases superfamily KAB05_01342 SM00490 helicase superfamily c-terminal domain KAB05_01342 SM00847 Helicase associated domain (HA2) Add an annotation KAB05_01355 SM00422 helix_turn_helix, mercury resistance KAB05_01366 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01371 SM00357 Cold shock protein domain KAB05_01387 SM00840 KAB05_01387 KAB05_01388 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB05_01392 SM00382 ATPases associated with a variety of cellular activities KAB05_01394 SM00382 ATPases associated with a variety of cellular activities KAB05_01403 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KAB05_01403 SM00534 ATPase domain of DNA mismatch repair MUTS family KAB05_01404 SM00344 helix_turn_helix ASNC type KAB05_01406 SM00052 Putative diguanylate phosphodiesterase KAB05_01411 SM00422 helix_turn_helix, mercury resistance KAB05_01426 SM00796 Allophanate hydrolase subunit 1 KAB05_01426 SM00797 Allophanate hydrolase subunit 2 KAB05_01427 SM00878 Biotin carboxylase C-terminal domain KAB05_01429 SM00671 Sel1-like repeats. KAB05_01435 SM00829 Enoylreductase KAB05_01438 SM00796 Allophanate hydrolase subunit 1 KAB05_01438 SM00797 Allophanate hydrolase subunit 2 KAB05_01438 SM00878 Biotin carboxylase C-terminal domain KAB05_01446 SM00382 ATPases associated with a variety of cellular activities KAB05_01451 SM00422 helix_turn_helix, mercury resistance KAB05_01454 SM01130 KAB05_01454 KAB05_01456 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01456 SM00895 KAB05_01456 KAB05_01461 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01487 SM01060 KAB05_01487 KAB05_01490 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01490 SM00895 KAB05_01490 KAB05_01493 SM00903 Flavin reductase like domain KAB05_01502 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_01504 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01504 SM00866 KAB05_01504 KAB05_01506 SM00382 ATPases associated with a variety of cellular activities KAB05_01514 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_01518 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_01525 SM00882 Coenzyme A transferase KAB05_01526 SM00882 Coenzyme A transferase KAB05_01536 SM00878 Biotin carboxylase C-terminal domain KAB05_01554 SM01236 KAB05_01554 KAB05_01555 SM01060 KAB05_01555 KAB05_01558 SM00384 DNA binding domain with preference for A/T rich regions KAB05_01562 SM00344 helix_turn_helix ASNC type KAB05_01564 SM00387 Histidine kinase-like ATPases KAB05_01564 SM00388 His Kinase A (phosphoacceptor) domain KAB05_01564 SM00448 cheY-homologous receiver domain KAB05_01565 SM00421 helix_turn_helix, Lux Regulon KAB05_01565 SM00448 cheY-homologous receiver domain KAB05_01569 SM00382 ATPases associated with a variety of cellular activities KAB05_01570 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_01571 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_01577 SM00450 Rhodanese Homology Domain KAB05_01578 SM00822 KAB05_01578 KAB05_01585 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01596 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KAB05_01600 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01610 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_01611 SM00382 ATPases associated with a variety of cellular activities KAB05_01616 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01616 SM00895 KAB05_01616 KAB05_01622 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KAB05_01632 SM00481 DNA polymerase alpha chain like domain KAB05_01633 SM00870 KAB05_01633 KAB05_01638 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01641 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KAB05_01648 SM00100 Cyclic nucleotide-monophosphate binding domain KAB05_01648 SM00419 helix_turn_helix, cAMP Regulatory protein KAB05_01652 SM00382 ATPases associated with a variety of cellular activities KAB05_01652 SM00930 KAB05_01652 KAB05_01659 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_01662 SM00382 ATPases associated with a variety of cellular activities KAB05_01664 SM00344 helix_turn_helix ASNC type KAB05_01668 SM00563 Phosphate acyltransferases KAB05_01670 SM01236 KAB05_01670 KAB05_01687 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_01687 SM00876 Biotin and Thiamin Synthesis associated domain KAB05_01691 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01698 SM00861 Transketolase, pyrimidine binding domain KAB05_01700 SM00867 YceI-like domain KAB05_01707 SM00344 helix_turn_helix ASNC type KAB05_01711 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01713 SM00382 ATPases associated with a variety of cellular activities KAB05_01717 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KAB05_01733 SM00470 ParB-like nuclease domain KAB05_01736 SM00382 ATPases associated with a variety of cellular activities KAB05_01748 SM00986 Uracil DNA glycosylase superfamily KAB05_01748 SM00987 UreE urease accessory protein, C-terminal domain KAB05_01753 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_01754 SM00411 bacterial (prokaryotic) histone like domain KAB05_01756 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB05_01759 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01777 SM00382 ATPases associated with a variety of cellular activities KAB05_01790 SM00487 DEAD-like helicases superfamily KAB05_01790 SM00490 helicase superfamily c-terminal domain KAB05_01790 SM00982 KAB05_01790 KAB05_01790 SM01058 CarD-like/TRCF domain KAB05_01792 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain KAB05_01795 SM00271 DnaJ molecular chaperone homology domain KAB05_01802 SM00411 bacterial (prokaryotic) histone like domain KAB05_01804 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01822 SM01006 Siderophore biosynthesis protein domain KAB05_01827 SM00855 Phosphoglycerate mutase family KAB05_01839 SM00382 ATPases associated with a variety of cellular activities KAB05_01847 SM01324 KAB05_01847 KAB05_01857 SM00493 KAB05_01857 KAB05_01858 SM00341 Helicase and RNase D C-terminal KAB05_01858 SM00474 3'-5' exonuclease KAB05_01864 SM00382 ATPases associated with a variety of cellular activities KAB05_01869 SM00267 diguanylate cyclase KAB05_01872 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_01874 SM00861 Transketolase, pyrimidine binding domain KAB05_01878 SM00829 Enoylreductase KAB05_01880 SM00382 ATPases associated with a variety of cellular activities KAB05_01881 SM00849 Metallo-beta-lactamase superfamily KAB05_01886 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01892 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_01892 SM00866 KAB05_01892 KAB05_01897 SM00382 ATPases associated with a variety of cellular activities KAB05_01898 SM00567 E-Z type HEAT repeats KAB05_01912 SM00882 Coenzyme A transferase KAB05_01913 SM00882 Coenzyme A transferase KAB05_01920 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01925 SM00903 Flavin reductase like domain KAB05_01927 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01934 SM00382 ATPases associated with a variety of cellular activities KAB05_01943 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_01948 SM00155 Phospholipase D. Active site motifs. KAB05_01953 SM00829 Enoylreductase KAB05_01973 SM00448 cheY-homologous receiver domain KAB05_01973 SM00862 Transcriptional regulatory protein, C terminal KAB05_01974 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB05_01974 SM00387 Histidine kinase-like ATPases KAB05_01974 SM00388 His Kinase A (phosphoacceptor) domain KAB05_01976 SM00342 helix_turn_helix, arabinose operon control protein KAB05_01978 SM00822 KAB05_01978 KAB05_01979 SM00822 KAB05_01979 KAB05_01987 SM00530 Helix-turn-helix XRE-family like proteins KAB05_01998 SM00421 helix_turn_helix, Lux Regulon KAB05_02014 SM01400 KAB05_02014 KAB05_02016 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02018 SM00382 ATPases associated with a variety of cellular activities KAB05_02021 SM00829 Enoylreductase KAB05_02024 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02041 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_02047 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_02047 SM00866 KAB05_02047 KAB05_02053 SM00912 haemagglutination activity domain KAB05_02068 SM00422 helix_turn_helix, mercury resistance KAB05_02072 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB05_02076 SM01060 KAB05_02076 KAB05_02080 SM00829 Enoylreductase KAB05_02084 SM00091 PAS domain KAB05_02084 SM00382 ATPases associated with a variety of cellular activities KAB05_02087 SM00855 Phosphoglycerate mutase family KAB05_02094 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_02094 SM00895 KAB05_02094 KAB05_02097 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KAB05_02100 SM00882 Coenzyme A transferase KAB05_02101 SM00882 Coenzyme A transferase KAB05_02108 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02109 SM00903 Flavin reductase like domain KAB05_02118 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB05_02122 SM00855 Phosphoglycerate mutase family KAB05_02126 SM00346 helix_turn_helix isocitrate lyase regulation KAB05_02127 SM00849 Metallo-beta-lactamase superfamily KAB05_02131 SM00564 beta-propeller repeat KAB05_02133 SM00710 Parallel beta-helix repeats KAB05_02140 SM00998 Adenylosuccinate lyase C-terminus KAB05_02142 SM00882 Coenzyme A transferase KAB05_02143 SM00882 Coenzyme A transferase KAB05_02147 SM01192 KAB05_02147 KAB05_02147 SM01193 KAB05_02147 KAB05_02160 SM00382 ATPases associated with a variety of cellular activities KAB05_02160 SM01086 C-terminal, D2-small domain, of ClpB protein KAB05_02163 SM00859 Semialdehyde dehydrogenase, NAD binding domain KAB05_02171 SM01264 KAB05_02171 KAB05_02185 SM00382 ATPases associated with a variety of cellular activities KAB05_02185 SM00962 SRP54-type protein, GTPase domain KAB05_02185 SM00963 SRP54-type protein, helical bundle domain KAB05_02190 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB05_02206 SM00347 helix_turn_helix multiple antibiotic resistance protein KAB05_02208 SM00052 Putative diguanylate phosphodiesterase KAB05_02208 SM00091 PAS domain KAB05_02208 SM00267 diguanylate cyclase KAB05_02218 SM00344 helix_turn_helix ASNC type KAB05_02224 SM00363 S4 RNA-binding domain KAB05_02225 SM00382 ATPases associated with a variety of cellular activities KAB05_02231 SM00935 Outer membrane protein (OmpH-like) KAB05_02234 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB05_02241 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_02242 SM00091 PAS domain KAB05_02243 SM00387 Histidine kinase-like ATPases KAB05_02244 SM00382 ATPases associated with a variety of cellular activities KAB05_02244 SM00448 cheY-homologous receiver domain KAB05_02261 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_02263 SM00852 Probable molybdopterin binding domain KAB05_02264 SM00852 Probable molybdopterin binding domain KAB05_02267 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_02268 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KAB05_02270 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KAB05_02274 SM00448 cheY-homologous receiver domain KAB05_02274 SM01012 KAB05_02274 KAB05_02279 SM00878 Biotin carboxylase C-terminal domain KAB05_02282 SM01236 KAB05_02282 KAB05_02289 SM00226 Low molecular weight phosphatase family KAB05_02295 SM00382 ATPases associated with a variety of cellular activities KAB05_02300 SM00822 KAB05_02300 KAB05_02306 SM00344 helix_turn_helix ASNC type KAB05_02309 SM00831 Cation transporter/ATPase, N-terminus KAB05_02315 SM00382 ATPases associated with a variety of cellular activities KAB05_02331 SM00344 helix_turn_helix ASNC type KAB05_02332 SM00830 Chorismate mutase type II KAB05_02341 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02341 SM00871 Bacterial transcription activator, effector binding domain KAB05_02343 SM00382 ATPases associated with a variety of cellular activities KAB05_02346 SM00862 Transcriptional regulatory protein, C terminal KAB05_02361 SM00853 MutL C terminal dimerisation domain KAB05_02361 SM01340 KAB05_02361 KAB05_02366 SM00363 S4 RNA-binding domain KAB05_02382 SM01230 KAB05_02382 KAB05_02383 SM00448 cheY-homologous receiver domain KAB05_02383 SM00862 Transcriptional regulatory protein, C terminal KAB05_02384 SM00387 Histidine kinase-like ATPases KAB05_02384 SM00388 His Kinase A (phosphoacceptor) domain KAB05_02389 SM00905 Dihydroneopterin aldolase KAB05_02392 SM00903 Flavin reductase like domain KAB05_02396 SM00822 KAB05_02396 KAB05_02397 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02398 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_02401 SM00937 KAB05_02401 KAB05_02424 SM01005 Alanine racemase, C-terminal domain KAB05_02426 SM00460 Transglutaminase/protease-like homologues KAB05_02430 SM01228 KAB05_02430 KAB05_02435 SM00798 AICARFT/IMPCHase bienzyme KAB05_02435 SM00851 MGS-like domain KAB05_02436 SM01209 KAB05_02436 KAB05_02436 SM01210 KAB05_02436 KAB05_02438 SM00382 ATPases associated with a variety of cellular activities KAB05_02438 SM00930 KAB05_02438 KAB05_02440 SM00849 Metallo-beta-lactamase superfamily KAB05_02469 SM00972 Spore Coat Protein U domain KAB05_02474 SM00972 Spore Coat Protein U domain KAB05_02477 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_02477 SM00895 KAB05_02477 KAB05_02481 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02484 SM01034 Sensors of blue-light using FAD KAB05_02499 SM00220 Serine/Threonine protein kinases, catalytic domain KAB05_02516 SM00855 Phosphoglycerate mutase family KAB05_02520 SM00487 DEAD-like helicases superfamily KAB05_02520 SM00490 helicase superfamily c-terminal domain KAB05_02521 SM00357 Cold shock protein domain KAB05_02534 SM00830 Chorismate mutase type II KAB05_02545 SM00387 Histidine kinase-like ATPases KAB05_02545 SM00388 His Kinase A (phosphoacceptor) domain KAB05_02546 SM00448 cheY-homologous receiver domain KAB05_02546 SM00862 Transcriptional regulatory protein, C terminal KAB05_02548 SM00382 ATPases associated with a variety of cellular activities KAB05_02553 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_02557 SM00382 ATPases associated with a variety of cellular activities KAB05_02560 SM00062 Bacterial periplasmic substrate-binding proteins KAB05_02569 SM00479 KAB05_02569 KAB05_02572 SM00382 ATPases associated with a variety of cellular activities KAB05_02582 SM00342 helix_turn_helix, arabinose operon control protein KAB05_02592 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_02596 SM00996 S-adenosyl-L-homocysteine hydrolase KAB05_02596 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB05_02599 SM00052 Putative diguanylate phosphodiesterase KAB05_02599 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KAB05_02599 SM00091 PAS domain KAB05_02599 SM00267 diguanylate cyclase KAB05_02600 SM00919 Malic enzyme, NAD binding domain KAB05_02600 SM01274 KAB05_02600 KAB05_02602 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB05_02613 SM01230 KAB05_02613 KAB05_02626 SM01252 KAB05_02626 KAB05_02672 SM00530 Helix-turn-helix XRE-family like proteins KAB05_02735 SM00507 HNH nucleases KAB05_02749 SM00530 Helix-turn-helix XRE-family like proteins KAB05_02768 SM00463 Small MutS-related domain KAB05_02770 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB05_02771 SM01092 CO dehydrogenase flavoprotein C-terminal domain KAB05_02784 SM00382 ATPases associated with a variety of cellular activities KAB05_02785 SM00382 ATPases associated with a variety of cellular activities KAB05_02795 SM00382 ATPases associated with a variety of cellular activities KAB05_02810 SM00829 Enoylreductase KAB05_02811 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KAB05_02841 SM00841 Elongation factor P, C-terminal KAB05_02841 SM01185 KAB05_02841 KAB05_02844 SM00052 Putative diguanylate phosphodiesterase KAB05_02851 SM00257 Lysin motif KAB05_02855 SM00936 Penicillin-binding protein 5, C-terminal domain KAB05_02864 SM00382 ATPases associated with a variety of cellular activities KAB05_02870 SM00344 helix_turn_helix ASNC type KAB05_02884 SM00487 DEAD-like helicases superfamily KAB05_02884 SM00490 helicase superfamily c-terminal domain KAB05_02890 SM00880 KAB05_02890 KAB05_02890 SM01118 KAB05_02890 KAB05_02900 SM01329 KAB05_02900 KAB05_02922 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KAB05_02926 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB05_02929 SM00487 DEAD-like helicases superfamily KAB05_02929 SM00490 helicase superfamily c-terminal domain KAB05_02931 SM00267 diguanylate cyclase KAB05_02944 SM00358 Double-stranded RNA binding motif KAB05_02944 SM00535 Ribonuclease III family KAB05_02947 SM00838 Elongation factor G C-terminus KAB05_02949 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KAB05_02959 SM00382 ATPases associated with a variety of cellular activities KAB05_02974 SM01211 KAB05_02974 KAB05_02975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KAB05_02976 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KAB05_02977 SM00382 ATPases associated with a variety of cellular activities KAB05_03003 SM00849 Metallo-beta-lactamase superfamily KAB05_03005 SM00382 ATPases associated with a variety of cellular activities KAB05_03020 SM00434 DNA Topoisomerase IV KAB05_03021 SM00893 Electron transfer flavoprotein domain KAB05_03022 SM00893 Electron transfer flavoprotein domain KAB05_03029 SM00382 ATPases associated with a variety of cellular activities KAB05_03030 SM00978 KAB05_03030 KAB05_03073 SM00530 Helix-turn-helix XRE-family like proteins KAB05_03085 SM00411 bacterial (prokaryotic) histone like domain KAB05_03108 SM00849 Metallo-beta-lactamase superfamily KAB05_03111 SM00883 Chaperonin 10 Kd subunit KAB05_03114 SM00046 Diacylglycerol kinase catalytic domain (presumed) KAB05_03130 SM00382 ATPases associated with a variety of cellular activities KAB05_03132 SM01103 KAB05_03132 KAB05_03135 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KAB05_03136 SM00851 MGS-like domain KAB05_03136 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB05_03142 SM00854 Bacterial capsule synthesis protein PGA_cap KAB05_03151 SM00881 CoA binding domain KAB05_03155 SM00861 Transketolase, pyrimidine binding domain KAB05_03162 SM00450 Rhodanese Homology Domain KAB05_03183 SM00014 Acid phosphatase homologues KAB05_03190 SM00822 KAB05_03190 KAB05_03199 SM00387 Histidine kinase-like ATPases KAB05_03199 SM00388 His Kinase A (phosphoacceptor) domain KAB05_03200 SM00448 cheY-homologous receiver domain KAB05_03200 SM00862 Transcriptional regulatory protein, C terminal KAB05_03204 SM00563 Phosphate acyltransferases KAB05_03207 SM00244 prohibitin homologues KAB05_03214 SM00829 Enoylreductase KAB05_03215 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03219 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03226 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_03233 SM00845 GatB domain KAB05_03262 SM00260 Two component signalling adaptor domain KAB05_03262 SM00448 cheY-homologous receiver domain KAB05_03263 SM00073 Histidine Phosphotransfer domain KAB05_03263 SM00387 Histidine kinase-like ATPases KAB05_03263 SM01231 KAB05_03263 KAB05_03264 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KAB05_03265 SM00260 Two component signalling adaptor domain KAB05_03266 SM00448 cheY-homologous receiver domain KAB05_03267 SM00448 cheY-homologous receiver domain KAB05_03278 SM00671 Sel1-like repeats. KAB05_03287 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB05_03287 SM01232 KAB05_03287 KAB05_03291 SM00838 Elongation factor G C-terminus KAB05_03304 SM00564 beta-propeller repeat KAB05_03307 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03319 SM00957 SecA DEAD-like domain KAB05_03319 SM00958 SecA preprotein cross-linking domain KAB05_03321 SM00849 Metallo-beta-lactamase superfamily KAB05_03327 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03339 SM00448 cheY-homologous receiver domain KAB05_03339 SM00862 Transcriptional regulatory protein, C terminal KAB05_03340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB05_03340 SM00387 Histidine kinase-like ATPases KAB05_03340 SM00388 His Kinase A (phosphoacceptor) domain KAB05_03365 SM00387 Histidine kinase-like ATPases KAB05_03365 SM00388 His Kinase A (phosphoacceptor) domain KAB05_03371 SM01323 KAB05_03371 KAB05_03378 SM00481 DNA polymerase alpha chain like domain KAB05_03383 SM00450 Rhodanese Homology Domain KAB05_03398 SM00267 diguanylate cyclase KAB05_03401 SM00155 Phospholipase D. Active site motifs. KAB05_03402 SM00563 Phosphate acyltransferases KAB05_03408 SM00650 Ribosomal RNA adenine dimethylases KAB05_03415 SM00878 Biotin carboxylase C-terminal domain KAB05_03434 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. KAB05_03440 SM00729 Elongator protein 3, MiaB family, Radical SAM KAB05_03450 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03460 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_03460 SM00955 KAB05_03460 KAB05_03473 SM00662 RNA polymerases D KAB05_03474 SM00363 S4 RNA-binding domain KAB05_03474 SM01390 KAB05_03474 KAB05_03487 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KAB05_03488 SM01374 KAB05_03488 KAB05_03492 SM00322 K homology RNA-binding domain KAB05_03495 SM01382 KAB05_03495 KAB05_03495 SM01383 KAB05_03495 KAB05_03499 SM01403 KAB05_03499 KAB05_03510 SM00563 Phosphate acyltransferases KAB05_03513 SM00487 DEAD-like helicases superfamily KAB05_03513 SM00490 helicase superfamily c-terminal domain KAB05_03522 SM00382 ATPases associated with a variety of cellular activities KAB05_03523 SM00487 DEAD-like helicases superfamily KAB05_03523 SM00490 helicase superfamily c-terminal domain KAB05_03525 SM00861 Transketolase, pyrimidine binding domain KAB05_03533 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB05_03553 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB05_03592 SM00072 Guanylate kinase homologues. KAB05_03593 SM01409 KAB05_03593 KAB05_03594 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KAB05_03594 SM00954 Region found in RelA / SpoT proteins KAB05_03611 SM00965 Secretin and TonB N terminus short domain KAB05_03615 SM00842 Cell division protein FtsA KAB05_03645 SM00671 Sel1-like repeats. KAB05_03646 SM00382 ATPases associated with a variety of cellular activities KAB05_03649 SM00947 Carbonic anhydrase KAB05_03650 SM00316 Ribosomal protein S1-like RNA-binding domain KAB05_03650 SM00732 Likely ribonuclease with RNase H fold. KAB05_03651 SM00448 cheY-homologous receiver domain KAB05_03651 SM00862 Transcriptional regulatory protein, C terminal KAB05_03652 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KAB05_03652 SM00387 Histidine kinase-like ATPases KAB05_03652 SM00388 His Kinase A (phosphoacceptor) domain KAB05_03661 SM00474 3'-5' exonuclease KAB05_03663 SM00530 Helix-turn-helix XRE-family like proteins KAB05_03667 SM00357 Cold shock protein domain KAB05_03671 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03675 SM00477 DNA/RNA non-specific endonuclease KAB05_03675 SM00892 DNA/RNA non-specific endonuclease KAB05_03685 SM00671 Sel1-like repeats. KAB05_03687 SM00342 helix_turn_helix, arabinose operon control protein KAB05_03704 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_03706 SM00530 Helix-turn-helix XRE-family like proteins KAB05_03715 SM00829 Enoylreductase KAB05_03719 SM00267 diguanylate cyclase KAB05_03725 SM00387 Histidine kinase-like ATPases KAB05_03725 SM00388 His Kinase A (phosphoacceptor) domain KAB05_03725 SM00448 cheY-homologous receiver domain KAB05_03727 SM00421 helix_turn_helix, Lux Regulon KAB05_03727 SM00448 cheY-homologous receiver domain KAB05_03731 SM00344 helix_turn_helix ASNC type KAB05_03739 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KAB05_03741 SM00937 KAB05_03741 KAB05_03746 SM00116 Domain in cystathionine beta-synthase and other proteins. KAB05_03746 SM01240 KAB05_03746 KAB05_03748 SM00849 Metallo-beta-lactamase superfamily KAB05_03757 SM00864 Tubulin/FtsZ family, GTPase domain KAB05_03757 SM00865 Tubulin/FtsZ family, C-terminal domain KAB05_03758 SM00842 Cell division protein FtsA KAB05_03771 SM00267 diguanylate cyclase KAB05_03785 SM00433 TopoisomeraseII KAB05_03786 SM00387 Histidine kinase-like ATPases KAB05_03786 SM00433 TopoisomeraseII KAB05_03790 SM00257 Lysin motif KAB05_03801 SM00448 cheY-homologous receiver domain KAB05_03801 SM00862 Transcriptional regulatory protein, C terminal KAB05_03802 SM00387 Histidine kinase-like ATPases KAB05_03802 SM00388 His Kinase A (phosphoacceptor) domain KAB05_03808 SM00450 Rhodanese Homology Domain KAB05_03831 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_03831 SM00866 KAB05_03831 KAB05_03833 SM00833 Cobalamin synthesis protein cobW C-terminal domain KAB05_03845 SM01130 KAB05_03845 KAB05_03850 SM00382 ATPases associated with a variety of cellular activities KAB05_03856 SM00478 endonuclease III KAB05_03856 SM00525 KAB05_03856 KAB05_03860 SM00829 Enoylreductase KAB05_03861 SM00345 helix_turn_helix gluconate operon transcriptional repressor KAB05_03869 SM00271 DnaJ molecular chaperone homology domain KAB05_03894 SM00530 Helix-turn-helix XRE-family like proteins KAB05_03917 SM00857 Resolvase, N terminal domain KAB05_03946 SM00470 ParB-like nuclease domain KAB05_03963 SM00318 Staphylococcal nuclease homologues KAB05_03964 SM00528 Domain in histone-like proteins of HNS family KAB05_03976 SM00470 ParB-like nuclease domain