locus-tag class description KAB07_00001 PF00005 ABC transporter KAB07_00001 PF12848 ABC transporter KAB07_00002 PF09335 SNARE associated Golgi protein KAB07_00004 PF00986 DNA gyrase B subunit, carboxyl terminus KAB07_00004 PF18053 DNA gyrase B subunit insert domain KAB07_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00004 PF01751 Toprim domain KAB07_00004 PF00204 DNA gyrase B KAB07_00005 PF02463 RecF/RecN/SMC N terminal domain KAB07_00006 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB07_00006 PF02767 DNA polymerase III beta subunit, central domain KAB07_00006 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB07_00007 PF00308 Bacterial dnaA protein KAB07_00007 PF11638 DnaA N-terminal domain KAB07_00007 PF08299 Bacterial dnaA protein helix-turn-helix KAB07_00008 PF00468 Ribosomal protein L34 KAB07_00009 PF00825 Ribonuclease P KAB07_00010 PF01809 Putative membrane protein insertion efficiency factor KAB07_00011 PF14849 YidC periplasmic domain KAB07_00011 PF02096 60Kd inner membrane protein KAB07_00012 PF10396 GTP-binding protein TrmE N-terminus KAB07_00012 PF12631 MnmE helical domain KAB07_00012 PF01926 50S ribosome-binding GTPase KAB07_00013 PF02583 Metal-sensitive transcriptional repressor KAB07_00014 PF16916 Dimerisation domain of Zinc Transporter KAB07_00014 PF01545 Cation efflux family KAB07_00015 PF10411 Disulfide bond isomerase protein N-terminus KAB07_00015 PF13098 Thioredoxin-like domain KAB07_00017 PF00156 Phosphoribosyl transferase domain KAB07_00019 PF01979 Amidohydrolase family KAB07_00020 PF00355 Rieske [2Fe-2S] domain KAB07_00021 PF03738 Glutathionylspermidine synthase preATP-grasp KAB07_00023 PF03741 Integral membrane protein TerC family KAB07_00024 PF01569 PAP2 superfamily KAB07_00026 PF08245 Mur ligase middle domain KAB07_00026 PF01225 Mur ligase family, catalytic domain KAB07_00026 PF02875 Mur ligase family, glutamate ligase domain KAB07_00028 PF00731 AIR carboxylase KAB07_00029 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KAB07_00029 PF02222 ATP-grasp domain KAB07_00030 PF13406 Transglycosylase SLT domain KAB07_00034 PF00012 Hsp70 protein KAB07_00035 PF01025 GrpE KAB07_00036 PF03466 LysR substrate binding domain KAB07_00036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00040 PF07859 alpha/beta hydrolase fold KAB07_00041 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB07_00048 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB07_00049 PF01252 Signal peptidase (SPase) II KAB07_00050 PF08264 Anticodon-binding domain of tRNA KAB07_00050 PF06827 Zinc finger found in FPG and IleRS KAB07_00050 PF00133 tRNA synthetases class I (I, L, M and V) KAB07_00051 PF01687 Riboflavin kinase KAB07_00051 PF06574 FAD synthetase KAB07_00053 PF01048 Phosphorylase superfamily KAB07_00054 PF08362 YcdC-like protein, C-terminal region KAB07_00054 PF00440 Bacterial regulatory proteins, tetR family KAB07_00055 PF00005 ABC transporter KAB07_00056 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_00057 PF00296 Luciferase-like monooxygenase KAB07_00058 PF09084 NMT1/THI5 like KAB07_00059 PF09084 NMT1/THI5 like KAB07_00060 PF00583 Acetyltransferase (GNAT) family KAB07_00060 PF00696 Amino acid kinase family KAB07_00063 PF00106 short chain dehydrogenase KAB07_00064 PF13419 Haloacid dehalogenase-like hydrolase KAB07_00066 PF01323 DSBA-like thioredoxin domain KAB07_00067 PF08360 QacR-like protein, C-terminal region KAB07_00067 PF00440 Bacterial regulatory proteins, tetR family KAB07_00068 PF00440 Bacterial regulatory proteins, tetR family KAB07_00069 PF00175 Oxidoreductase NAD-binding domain KAB07_00070 PF00487 Fatty acid desaturase KAB07_00071 PF01138 3' exoribonuclease family, domain 1 KAB07_00071 PF03725 3' exoribonuclease family, domain 2 KAB07_00072 PF04185 Phosphoesterase family KAB07_00072 PF05506 Domain of unknown function (DUF756) KAB07_00073 PF05506 Domain of unknown function (DUF756) KAB07_00073 PF04185 Phosphoesterase family KAB07_00075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KAB07_00075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KAB07_00076 PF01510 N-acetylmuramoyl-L-alanine amidase KAB07_00077 PF03023 Lipid II flippase MurJ KAB07_00078 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB07_00078 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB07_00079 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB07_00079 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAB07_00080 PF13614 AAA domain KAB07_00080 PF02706 Chain length determinant protein KAB07_00080 PF13807 G-rich domain on putative tyrosine kinase KAB07_00081 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB07_00082 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KAB07_00082 PF02563 Polysaccharide biosynthesis/export protein KAB07_00082 PF10531 SLBB domain KAB07_00083 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB07_00083 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB07_00083 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB07_00084 PF01370 NAD dependent epimerase/dehydratase family KAB07_00086 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_00090 PF08485 Polysaccharide biosynthesis protein C-terminal KAB07_00090 PF02719 Polysaccharide biosynthesis protein KAB07_00091 PF01370 NAD dependent epimerase/dehydratase family KAB07_00092 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB07_00093 PF13579 Glycosyl transferase 4-like domain KAB07_00094 PF01370 NAD dependent epimerase/dehydratase family KAB07_00095 PF00953 Glycosyl transferase family 4 KAB07_00096 PF02397 Bacterial sugar transferase KAB07_00097 PF00483 Nucleotidyl transferase KAB07_00098 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAB07_00098 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAB07_00098 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAB07_00099 PF00342 Phosphoglucose isomerase KAB07_00100 PF16363 GDP-mannose 4,6 dehydratase KAB07_00101 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB07_00101 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB07_00101 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB07_00101 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB07_00102 PF02652 L-lactate permease KAB07_00103 PF00392 Bacterial regulatory proteins, gntR family KAB07_00103 PF07729 FCD domain KAB07_00104 PF01070 FMN-dependent dehydrogenase KAB07_00105 PF09330 D-lactate dehydrogenase, membrane binding KAB07_00105 PF01565 FAD binding domain KAB07_00106 PF00155 Aminotransferase class I and II KAB07_00107 PF07729 FCD domain KAB07_00107 PF00392 Bacterial regulatory proteins, gntR family KAB07_00109 PF00285 Citrate synthase, C-terminal domain KAB07_00110 PF00694 Aconitase C-terminal domain KAB07_00110 PF00330 Aconitase family (aconitate hydratase) KAB07_00117 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_00117 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_00123 PF00849 RNA pseudouridylate synthase KAB07_00126 PF07715 TonB-dependent Receptor Plug Domain KAB07_00126 PF00593 TonB dependent receptor KAB07_00128 PF01037 Lrp/AsnC ligand binding domain KAB07_00129 PF01266 FAD dependent oxidoreductase KAB07_00130 PF00842 Alanine racemase, C-terminal domain KAB07_00130 PF01168 Alanine racemase, N-terminal domain KAB07_00131 PF01042 Endoribonuclease L-PSP KAB07_00132 PF00324 Amino acid permease KAB07_00133 PF00324 Amino acid permease KAB07_00135 PF00171 Aldehyde dehydrogenase family KAB07_00136 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB07_00136 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB07_00137 PF13193 AMP-binding enzyme C-terminal domain KAB07_00137 PF00501 AMP-binding enzyme KAB07_00138 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_00138 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_00138 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_00139 PF00378 Enoyl-CoA hydratase/isomerase KAB07_00140 PF00378 Enoyl-CoA hydratase/isomerase KAB07_00141 PF07690 Major Facilitator Superfamily KAB07_00141 PF00083 Sugar (and other) transporter KAB07_00142 PF00765 Autoinducer synthase KAB07_00144 PF03472 Autoinducer binding domain KAB07_00144 PF00196 Bacterial regulatory proteins, luxR family KAB07_00145 PF13737 Transposase DDE domain KAB07_00146 PF00501 AMP-binding enzyme KAB07_00147 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_00147 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_00147 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_00148 PF16197 Ketoacyl-synthetase C-terminal extension KAB07_00148 PF00975 Thioesterase domain KAB07_00148 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_00148 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_00148 PF00550 Phosphopantetheine attachment site KAB07_00148 PF08242 Methyltransferase domain KAB07_00148 PF14765 Polyketide synthase dehydratase KAB07_00149 PF00975 Thioesterase domain KAB07_00149 PF00550 Phosphopantetheine attachment site KAB07_00149 PF00501 AMP-binding enzyme KAB07_00149 PF00668 Condensation domain KAB07_00149 PF13193 AMP-binding enzyme C-terminal domain KAB07_00152 PF16363 GDP-mannose 4,6 dehydratase KAB07_00153 PF01648 4'-phosphopantetheinyl transferase superfamily KAB07_00156 PF01722 BolA-like protein KAB07_00158 PF13614 AAA domain KAB07_00161 PF09335 SNARE associated Golgi protein KAB07_00162 PF07681 DoxX KAB07_00163 PF04286 Protein of unknown function (DUF445) KAB07_00164 PF00117 Glutamine amidotransferase class-I KAB07_00164 PF00958 GMP synthase C terminal domain KAB07_00164 PF02540 NAD synthase KAB07_00165 PF01909 Nucleotidyltransferase domain KAB07_00165 PF13427 Domain of unknown function (DUF4111) KAB07_00166 PF03551 Transcriptional regulator PadR-like family KAB07_00168 PF02678 Pirin KAB07_00168 PF05726 Pirin C-terminal cupin domain KAB07_00172 PF00750 tRNA synthetases class I (R) KAB07_00172 PF05746 DALR anticodon binding domain KAB07_00172 PF03485 Arginyl tRNA synthetase N terminal domain KAB07_00173 PF00390 Malic enzyme, N-terminal domain KAB07_00173 PF03949 Malic enzyme, NAD binding domain KAB07_00174 PF04261 Dyp-type peroxidase family KAB07_00175 PF01810 LysE type translocator KAB07_00176 PF00950 ABC 3 transport family KAB07_00177 PF00005 ABC transporter KAB07_00181 PF00119 ATP synthase A chain KAB07_00182 PF00137 ATP synthase subunit C KAB07_00183 PF00430 ATP synthase B/B' CF(0) KAB07_00184 PF00213 ATP synthase delta (OSCP) subunit KAB07_00185 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB07_00185 PF00306 ATP synthase alpha/beta chain, C terminal domain KAB07_00185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB07_00186 PF00231 ATP synthase KAB07_00187 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB07_00187 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAB07_00188 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KAB07_00190 PF00255 Glutathione peroxidase KAB07_00192 PF07690 Major Facilitator Superfamily KAB07_00193 PF00440 Bacterial regulatory proteins, tetR family KAB07_00194 PF00892 EamA-like transporter family KAB07_00195 PF01300 Telomere recombination KAB07_00196 PF17782 DprA winged helix domain KAB07_00196 PF02481 DNA recombination-mediator protein A KAB07_00198 PF01327 Polypeptide deformylase KAB07_00203 PF00440 Bacterial regulatory proteins, tetR family KAB07_00210 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_00212 PF03358 NADPH-dependent FMN reductase KAB07_00216 PF11842 Domain of unknown function (DUF3362) KAB07_00216 PF04055 Radical SAM superfamily KAB07_00216 PF08497 Radical SAM N-terminal KAB07_00219 PF00817 impB/mucB/samB family KAB07_00219 PF11799 impB/mucB/samB family C-terminal domain KAB07_00219 PF11798 IMS family HHH motif KAB07_00221 PF07690 Major Facilitator Superfamily KAB07_00222 PF03641 Possible lysine decarboxylase KAB07_00223 PF03471 Transporter associated domain KAB07_00223 PF03741 Integral membrane protein TerC family KAB07_00224 PF02810 SEC-C motif KAB07_00225 PF03458 UPF0126 domain KAB07_00226 PF07690 Major Facilitator Superfamily KAB07_00227 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB07_00227 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB07_00228 PF00501 AMP-binding enzyme KAB07_00228 PF13193 AMP-binding enzyme C-terminal domain KAB07_00231 PF00719 Inorganic pyrophosphatase KAB07_00232 PF03573 outer membrane porin, OprD family KAB07_00235 PF00701 Dihydrodipicolinate synthetase family KAB07_00237 PF00392 Bacterial regulatory proteins, gntR family KAB07_00237 PF00155 Aminotransferase class I and II KAB07_00238 PF01078 Magnesium chelatase, subunit ChlI KAB07_00238 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB07_00240 PF00665 Integrase core domain KAB07_00244 PF00582 Universal stress protein family KAB07_00245 PF00916 Sulfate permease family KAB07_00245 PF01740 STAS domain KAB07_00247 PF01078 Magnesium chelatase, subunit ChlI KAB07_00247 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAB07_00249 PF00543 Nitrogen regulatory protein P-II KAB07_00250 PF00909 Ammonium Transporter Family KAB07_00251 PF03477 ATP cone domain KAB07_00252 PF01872 RibD C-terminal domain KAB07_00252 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB07_00254 PF00677 Lumazine binding domain KAB07_00258 PF00883 Cytosol aminopeptidase family, catalytic domain KAB07_00258 PF02789 Cytosol aminopeptidase family, N-terminal domain KAB07_00260 PF03739 Lipopolysaccharide export system permease LptF/LptG KAB07_00261 PF01676 Metalloenzyme superfamily KAB07_00261 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KAB07_00262 PF03572 Peptidase family S41 KAB07_00262 PF00595 PDZ domain KAB07_00263 PF00072 Response regulator receiver domain KAB07_00263 PF02954 Bacterial regulatory protein, Fis family KAB07_00263 PF00158 Sigma-54 interaction domain KAB07_00264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00264 PF00512 His Kinase A (phospho-acceptor) domain KAB07_00265 PF00072 Response regulator receiver domain KAB07_00265 PF00196 Bacterial regulatory proteins, luxR family KAB07_00266 PF00768 D-alanyl-D-alanine carboxypeptidase KAB07_00267 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_00268 PF01842 ACT domain KAB07_00268 PF00742 Homoserine dehydrogenase KAB07_00268 PF03447 Homoserine dehydrogenase, NAD binding domain KAB07_00269 PF13098 Thioredoxin-like domain KAB07_00269 PF10411 Disulfide bond isomerase protein N-terminus KAB07_00270 PF02899 Phage integrase, N-terminal SAM-like domain KAB07_00270 PF00589 Phage integrase family KAB07_00272 PF07664 Ferrous iron transport protein B C terminus KAB07_00272 PF02421 Ferrous iron transport protein B KAB07_00272 PF07670 Nucleoside recognition KAB07_00274 PF08245 Mur ligase middle domain KAB07_00274 PF02875 Mur ligase family, glutamate ligase domain KAB07_00275 PF01098 Cell cycle protein KAB07_00276 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB07_00277 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAB07_00278 PF00149 Calcineurin-like phosphoesterase KAB07_00279 PF00293 NUDIX domain KAB07_00280 PF13667 ThiC-associated domain KAB07_00280 PF01964 Radical SAM ThiC family KAB07_00283 PF00892 EamA-like transporter family KAB07_00284 PF02321 Outer membrane efflux protein KAB07_00285 PF01895 PhoU domain KAB07_00286 PF04362 Bacterial Fe(2+) trafficking KAB07_00287 PF00206 Lyase KAB07_00287 PF14698 Argininosuccinate lyase C-terminal KAB07_00288 PF07694 5TMR of 5TMR-LYT KAB07_00288 PF06580 Histidine kinase KAB07_00288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00289 PF04397 LytTr DNA-binding domain KAB07_00289 PF00072 Response regulator receiver domain KAB07_00290 PF03900 Porphobilinogen deaminase, C-terminal domain KAB07_00290 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAB07_00295 PF00816 H-NS histone family KAB07_00298 PF03958 Bacterial type II/III secretion system short domain KAB07_00298 PF00263 Bacterial type II and III secretion system protein KAB07_00299 PF00498 FHA domain KAB07_00299 PF12401 Protein of unknown function (DUF2662) KAB07_00300 PF13419 Haloacid dehalogenase-like hydrolase KAB07_00301 PF00425 chorismate binding enzyme KAB07_00301 PF04715 Anthranilate synthase component I, N terminal region KAB07_00306 PF00009 Elongation factor Tu GTP binding domain KAB07_00306 PF03143 Elongation factor Tu C-terminal domain KAB07_00306 PF03144 Elongation factor Tu domain 2 KAB07_00308 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAB07_00309 PF02357 Transcription termination factor nusG KAB07_00309 PF00467 KOW motif KAB07_00310 PF00298 Ribosomal protein L11, RNA binding domain KAB07_00310 PF03946 Ribosomal protein L11, N-terminal domain KAB07_00311 PF00687 Ribosomal protein L1p/L10e family KAB07_00312 PF00466 Ribosomal protein L10 KAB07_00313 PF00542 Ribosomal protein L7/L12 C-terminal domain KAB07_00313 PF16320 Ribosomal protein L7/L12 dimerisation domain KAB07_00314 PF04563 RNA polymerase beta subunit KAB07_00314 PF04561 RNA polymerase Rpb2, domain 2 KAB07_00314 PF04565 RNA polymerase Rpb2, domain 3 KAB07_00314 PF10385 RNA polymerase beta subunit external 1 domain KAB07_00314 PF00562 RNA polymerase Rpb2, domain 6 KAB07_00314 PF04560 RNA polymerase Rpb2, domain 7 KAB07_00315 PF00623 RNA polymerase Rpb1, domain 2 KAB07_00315 PF04983 RNA polymerase Rpb1, domain 3 KAB07_00315 PF04997 RNA polymerase Rpb1, domain 1 KAB07_00315 PF05000 RNA polymerase Rpb1, domain 4 KAB07_00315 PF04998 RNA polymerase Rpb1, domain 5 KAB07_00319 PF00561 alpha/beta hydrolase fold KAB07_00320 PF03553 Na+/H+ antiporter family KAB07_00320 PF13726 Na+-H+ antiporter family KAB07_00323 PF00183 Hsp90 protein KAB07_00323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00326 PF01323 DSBA-like thioredoxin domain KAB07_00328 PF09278 MerR, DNA binding KAB07_00328 PF00376 MerR family regulatory protein KAB07_00332 PF02803 Thiolase, C-terminal domain KAB07_00332 PF00108 Thiolase, N-terminal domain KAB07_00333 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB07_00333 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB07_00333 PF00378 Enoyl-CoA hydratase/isomerase KAB07_00338 PF01541 GIY-YIG catalytic domain KAB07_00338 PF02151 UvrB/uvrC motif KAB07_00338 PF08459 UvrC Helix-hairpin-helix N-terminal KAB07_00340 PF01066 CDP-alcohol phosphatidyltransferase KAB07_00341 PF12833 Helix-turn-helix domain KAB07_00341 PF02805 Metal binding domain of Ada KAB07_00341 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB07_00341 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB07_00346 PF13533 Biotin-lipoyl like KAB07_00347 PF03652 Holliday junction resolvase KAB07_00348 PF02622 Uncharacterized ACR, COG1678 KAB07_00349 PF02463 RecF/RecN/SMC N terminal domain KAB07_00351 PF06865 Pyrimidine/purine nucleoside phosphorylase KAB07_00352 PF00588 SpoU rRNA Methylase family KAB07_00352 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB07_00354 PF01121 Dephospho-CoA kinase KAB07_00355 PF06750 Bacterial Peptidase A24 N-terminal domain KAB07_00355 PF01478 Type IV leader peptidase family KAB07_00356 PF00482 Type II secretion system (T2SS), protein F KAB07_00357 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAB07_00357 PF00437 Type II/IV secretion system protein KAB07_00358 PF00121 Triosephosphate isomerase KAB07_00359 PF03840 Preprotein translocase SecG subunit KAB07_00363 PF02576 RimP N-terminal domain KAB07_00363 PF17384 RimP C-terminal SH3 domain KAB07_00364 PF00575 S1 RNA binding domain KAB07_00364 PF13184 NusA-like KH domain KAB07_00364 PF08529 NusA N-terminal domain KAB07_00365 PF08364 Bacterial translation initiation factor IF-2 associated region KAB07_00365 PF11987 Translation-initiation factor 2 KAB07_00365 PF04760 Translation initiation factor IF-2, N-terminal region KAB07_00365 PF00009 Elongation factor Tu GTP binding domain KAB07_00366 PF02033 Ribosome-binding factor A KAB07_00368 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KAB07_00370 PF00361 Proton-conducting membrane transporter KAB07_00371 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB07_00372 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB07_00372 PF13244 Domain of unknown function (DUF4040) KAB07_00372 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KAB07_00372 PF00361 Proton-conducting membrane transporter KAB07_00375 PF01502 Phosphoribosyl-AMP cyclohydrolase KAB07_00376 PF01494 FAD binding domain KAB07_00377 PF03109 ABC1 family KAB07_00379 PF01209 ubiE/COQ5 methyltransferase family KAB07_00381 PF03976 Polyphosphate kinase 2 (PPK2) KAB07_00383 PF17946 RecC C-terminal domain KAB07_00384 PF12705 PD-(D/E)XK nuclease superfamily KAB07_00384 PF00580 UvrD/REP helicase N-terminal domain KAB07_00384 PF13361 UvrD-like helicase C-terminal domain KAB07_00385 PF13538 UvrD-like helicase C-terminal domain KAB07_00387 PF00312 Ribosomal protein S15 KAB07_00388 PF01138 3' exoribonuclease family, domain 1 KAB07_00388 PF00013 KH domain KAB07_00388 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAB07_00388 PF00575 S1 RNA binding domain KAB07_00388 PF03725 3' exoribonuclease family, domain 2 KAB07_00389 PF01544 CorA-like Mg2+ transporter protein KAB07_00391 PF01556 DnaJ C terminal domain KAB07_00391 PF00226 DnaJ domain KAB07_00393 PF01430 Hsp33 protein KAB07_00394 PF02254 TrkA-N domain KAB07_00394 PF00999 Sodium/hydrogen exchanger family KAB07_00395 PF00270 DEAD/DEAH box helicase KAB07_00395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAB07_00395 PF00271 Helicase conserved C-terminal domain KAB07_00395 PF17764 3′ DNA-binding domain (3′BD) KAB07_00395 PF18074 Primosomal protein N C-terminal domain KAB07_00396 PF00482 Type II secretion system (T2SS), protein F KAB07_00397 PF07963 Prokaryotic N-terminal methylation motif KAB07_00397 PF08334 Type II secretion system (T2SS), protein G KAB07_00399 PF01588 Putative tRNA binding domain KAB07_00400 PF00795 Carbon-nitrogen hydrolase KAB07_00401 PF00571 CBS domain KAB07_00401 PF03471 Transporter associated domain KAB07_00402 PF01206 Sulfurtransferase TusA KAB07_00405 PF01177 Asp/Glu/Hydantoin racemase KAB07_00407 PF00762 Ferrochelatase KAB07_00408 PF00753 Metallo-beta-lactamase superfamily KAB07_00409 PF03884 DNA gyrase inhibitor YacG KAB07_00413 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KAB07_00415 PF01197 Ribosomal protein L31 KAB07_00416 PF03109 ABC1 family KAB07_00417 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_00417 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB07_00418 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_00418 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB07_00418 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_00419 PF01554 MatE KAB07_00421 PF04055 Radical SAM superfamily KAB07_00421 PF06969 HemN C-terminal domain KAB07_00422 PF00106 short chain dehydrogenase KAB07_00423 PF03466 LysR substrate binding domain KAB07_00423 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00426 PF13193 AMP-binding enzyme C-terminal domain KAB07_00426 PF00501 AMP-binding enzyme KAB07_00427 PF12111 Polyribonucleotide phosphorylase C terminal KAB07_00427 PF00575 S1 RNA binding domain KAB07_00427 PF10150 Ribonuclease E/G family KAB07_00428 PF01479 S4 domain KAB07_00428 PF00849 RNA pseudouridylate synthase KAB07_00429 PF13419 Haloacid dehalogenase-like hydrolase KAB07_00430 PF08279 HTH domain KAB07_00430 PF13280 WYL domain KAB07_00431 PF02798 Glutathione S-transferase, N-terminal domain KAB07_00433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00433 PF03466 LysR substrate binding domain KAB07_00434 PF12706 Beta-lactamase superfamily domain KAB07_00435 PF00141 Peroxidase KAB07_00436 PF05524 PEP-utilising enzyme, N-terminal KAB07_00436 PF02896 PEP-utilising enzyme, TIM barrel domain KAB07_00436 PF00391 PEP-utilising enzyme, mobile domain KAB07_00436 PF01590 GAF domain KAB07_00437 PF00293 NUDIX domain KAB07_00441 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00441 PF03466 LysR substrate binding domain KAB07_00443 PF00330 Aconitase family (aconitate hydratase) KAB07_00444 PF00694 Aconitase C-terminal domain KAB07_00446 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB07_00449 PF01176 Translation initiation factor 1A / IF-1 KAB07_00451 PF01416 tRNA pseudouridine synthase KAB07_00455 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB07_00455 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB07_00457 PF00375 Sodium:dicarboxylate symporter family KAB07_00459 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB07_00460 PF01810 LysE type translocator KAB07_00463 PF00107 Zinc-binding dehydrogenase KAB07_00463 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_00464 PF01638 HxlR-like helix-turn-helix KAB07_00466 PF08272 Topoisomerase I zinc-ribbon-like KAB07_00466 PF01396 Topoisomerase DNA binding C4 zinc finger KAB07_00466 PF01131 DNA topoisomerase KAB07_00466 PF01751 Toprim domain KAB07_00469 PF00580 UvrD/REP helicase N-terminal domain KAB07_00469 PF13361 UvrD-like helicase C-terminal domain KAB07_00470 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KAB07_00474 PF02254 TrkA-N domain KAB07_00474 PF00999 Sodium/hydrogen exchanger family KAB07_00475 PF00471 Ribosomal protein L33 KAB07_00476 PF00830 Ribosomal L28 family KAB07_00477 PF00171 Aldehyde dehydrogenase family KAB07_00479 PF00551 Formyl transferase KAB07_00479 PF01842 ACT domain KAB07_00481 PF01618 MotA/TolQ/ExbB proton channel family KAB07_00483 PF01625 Peptide methionine sulfoxide reductase KAB07_00485 PF00186 Dihydrofolate reductase KAB07_00486 PF00303 Thymidylate synthase KAB07_00489 PF01790 Prolipoprotein diacylglyceryl transferase KAB07_00493 PF00902 Sec-independent protein translocase protein (TatC) KAB07_00494 PF02416 mttA/Hcf106 family KAB07_00495 PF02416 mttA/Hcf106 family KAB07_00497 PF01725 Ham1 family KAB07_00499 PF07021 Methionine biosynthesis protein MetW KAB07_00499 PF00561 alpha/beta hydrolase fold KAB07_00500 PF00561 alpha/beta hydrolase fold KAB07_00501 PF00682 HMGL-like KAB07_00501 PF08502 LeuA allosteric (dimerisation) domain KAB07_00502 PF18331 PKHD-type hydroxylase C-terminal domain KAB07_00502 PF13640 2OG-Fe(II) oxygenase superfamily KAB07_00503 PF00593 TonB dependent receptor KAB07_00503 PF07715 TonB-dependent Receptor Plug Domain KAB07_00504 PF05698 Bacterial trigger factor protein (TF) C-terminus KAB07_00504 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB07_00504 PF05697 Bacterial trigger factor protein (TF) KAB07_00505 PF00574 Clp protease KAB07_00506 PF07724 AAA domain (Cdc48 subfamily) KAB07_00506 PF10431 C-terminal, D2-small domain, of ClpB protein KAB07_00506 PF06689 ClpX C4-type zinc finger KAB07_00509 PF05683 Fumarase C-terminus KAB07_00509 PF05681 Fumarate hydratase (Fumerase) KAB07_00510 PF01515 Phosphate acetyl/butaryl transferase KAB07_00510 PF07085 DRTGG domain KAB07_00511 PF00871 Acetokinase family KAB07_00512 PF00920 Dehydratase family KAB07_00513 PF01081 KDPG and KHG aldolase KAB07_00514 PF02447 GntP family permease KAB07_00515 PF01202 Shikimate kinase KAB07_00516 PF00171 Aldehyde dehydrogenase family KAB07_00517 PF00171 Aldehyde dehydrogenase family KAB07_00518 PF00561 alpha/beta hydrolase fold KAB07_00520 PF00933 Glycosyl hydrolase family 3 N terminal domain KAB07_00521 PF03572 Peptidase family S41 KAB07_00521 PF17804 Tail specific protease N-terminal domain KAB07_00521 PF11818 C-terminal domain of tail specific protease (DUF3340) KAB07_00521 PF00595 PDZ domain KAB07_00522 PF13439 Glycosyltransferase Family 4 KAB07_00522 PF00534 Glycosyl transferases group 1 KAB07_00523 PF01569 PAP2 superfamily KAB07_00524 PF04384 Iron-sulphur cluster assembly KAB07_00525 PF00334 Nucleoside diphosphate kinase KAB07_00526 PF04055 Radical SAM superfamily KAB07_00528 PF13464 Domain of unknown function (DUF4115) KAB07_00529 PF04551 GcpE protein KAB07_00530 PF03129 Anticodon binding domain KAB07_00530 PF13393 Histidyl-tRNA synthetase KAB07_00532 PF13360 PQQ-like domain KAB07_00533 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAB07_00533 PF01926 50S ribosome-binding GTPase KAB07_00536 PF00550 Phosphopantetheine attachment site KAB07_00537 PF00550 Phosphopantetheine attachment site KAB07_00539 PF00501 AMP-binding enzyme KAB07_00539 PF13193 AMP-binding enzyme C-terminal domain KAB07_00542 PF00221 Aromatic amino acid lyase KAB07_00546 PF04820 Tryptophan halogenase KAB07_00548 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_00548 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_00551 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_00551 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_00554 PF02556 Preprotein translocase subunit SecB KAB07_00555 PF00462 Glutaredoxin KAB07_00557 PF03193 RsgA GTPase KAB07_00558 PF00929 Exonuclease KAB07_00561 PF02321 Outer membrane efflux protein KAB07_00562 PF12704 MacB-like periplasmic core domain KAB07_00562 PF02687 FtsX-like permease family KAB07_00562 PF00005 ABC transporter KAB07_00563 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_00566 PF09334 tRNA synthetases class I (M) KAB07_00566 PF00133 tRNA synthetases class I (I, L, M and V) KAB07_00566 PF08264 Anticodon-binding domain of tRNA KAB07_00566 PF13603 Leucyl-tRNA synthetase, Domain 2 KAB07_00568 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB07_00568 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB07_00568 PF00205 Thiamine pyrophosphate enzyme, central domain KAB07_00569 PF10369 Small subunit of acetolactate synthase KAB07_00570 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAB07_00570 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAB07_00571 PF00990 Diguanylate cyclase, GGDEF domain KAB07_00571 PF03707 Bacterial signalling protein N terminal repeat KAB07_00571 PF00563 EAL domain KAB07_00575 PF00009 Elongation factor Tu GTP binding domain KAB07_00575 PF03144 Elongation factor Tu domain 2 KAB07_00575 PF16658 Class II release factor RF3, C-terminal domain KAB07_00578 PF01026 TatD related DNase KAB07_00579 PF00330 Aconitase family (aconitate hydratase) KAB07_00579 PF00694 Aconitase C-terminal domain KAB07_00581 PF00899 ThiF family KAB07_00582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00582 PF03466 LysR substrate binding domain KAB07_00584 PF01207 Dihydrouridine synthase (Dus) KAB07_00585 PF07690 Major Facilitator Superfamily KAB07_00587 PF00892 EamA-like transporter family KAB07_00588 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAB07_00588 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAB07_00589 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KAB07_00590 PF02233 NAD(P) transhydrogenase beta subunit KAB07_00591 PF00106 short chain dehydrogenase KAB07_00593 PF01261 Xylose isomerase-like TIM barrel KAB07_00594 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB07_00594 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB07_00595 PF00378 Enoyl-CoA hydratase/isomerase KAB07_00596 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00596 PF01627 Hpt domain KAB07_00596 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAB07_00596 PF00072 Response regulator receiver domain KAB07_00596 PF00672 HAMP domain KAB07_00596 PF00512 His Kinase A (phospho-acceptor) domain KAB07_00597 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_00599 PF05958 tRNA (Uracil-5-)-methyltransferase KAB07_00600 PF02824 TGS domain KAB07_00600 PF13291 ACT domain KAB07_00600 PF04607 Region found in RelA / SpoT proteins KAB07_00602 PF03819 MazG nucleotide pyrophosphohydrolase domain KAB07_00604 PF01743 Poly A polymerase head domain KAB07_00604 PF12626 Polymerase A arginine-rich C-terminus KAB07_00604 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB07_00605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAB07_00606 PF02548 Ketopantoate hydroxymethyltransferase KAB07_00607 PF02569 Pantoate-beta-alanine ligase KAB07_00608 PF03668 P-loop ATPase protein family KAB07_00609 PF00381 PTS HPr component phosphorylation site KAB07_00610 PF04751 Protein of unknown function (DUF615) KAB07_00611 PF00501 AMP-binding enzyme KAB07_00611 PF13193 AMP-binding enzyme C-terminal domain KAB07_00612 PF02824 TGS domain KAB07_00612 PF03129 Anticodon binding domain KAB07_00612 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB07_00612 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB07_00613 PF05198 Translation initiation factor IF-3, N-terminal domain KAB07_00613 PF00707 Translation initiation factor IF-3, C-terminal domain KAB07_00614 PF02798 Glutathione S-transferase, N-terminal domain KAB07_00614 PF00043 Glutathione S-transferase, C-terminal domain KAB07_00615 PF09335 SNARE associated Golgi protein KAB07_00616 PF07690 Major Facilitator Superfamily KAB07_00617 PF01632 Ribosomal protein L35 KAB07_00618 PF00453 Ribosomal protein L20 KAB07_00622 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAB07_00622 PF01409 tRNA synthetases class II core domain (F) KAB07_00623 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAB07_00623 PF01588 Putative tRNA binding domain KAB07_00623 PF03147 Ferredoxin-fold anticodon binding domain KAB07_00623 PF03484 tRNA synthetase B5 domain KAB07_00623 PF03483 B3/4 domain KAB07_00624 PF00216 Bacterial DNA-binding protein KAB07_00626 PF07498 Rho termination factor, N-terminal domain KAB07_00626 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAB07_00626 PF07497 Rho termination factor, RNA-binding domain KAB07_00627 PF00085 Thioredoxin KAB07_00628 PF02541 Ppx/GppA phosphatase family KAB07_00629 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KAB07_00630 PF01171 PP-loop family KAB07_00630 PF09179 TilS substrate binding domain KAB07_00630 PF11734 TilS substrate C-terminal domain KAB07_00631 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB07_00631 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB07_00632 PF02325 YGGT family KAB07_00633 PF00476 DNA polymerase family A KAB07_00633 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAB07_00633 PF01612 3'-5' exonuclease KAB07_00633 PF01367 5'-3' exonuclease, C-terminal SAM fold KAB07_00637 PF00437 Type II/IV secretion system protein KAB07_00638 PF02566 OsmC-like protein KAB07_00639 PF01047 MarR family KAB07_00641 PF00795 Carbon-nitrogen hydrolase KAB07_00650 PF04552 Sigma-54, DNA binding domain KAB07_00650 PF04963 Sigma-54 factor, core binding domain KAB07_00650 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAB07_00651 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAB07_00652 PF01722 BolA-like protein KAB07_00653 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB07_00654 PF01634 ATP phosphoribosyltransferase KAB07_00655 PF00815 Histidinol dehydrogenase KAB07_00656 PF00155 Aminotransferase class I and II KAB07_00657 PF00425 chorismate binding enzyme KAB07_00657 PF04715 Anthranilate synthase component I, N terminal region KAB07_00665 PF00293 NUDIX domain KAB07_00666 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_00667 PF00814 Glycoprotease family KAB07_00668 PF04445 Putative SAM-dependent methyltransferase KAB07_00670 PF00756 Putative esterase KAB07_00672 PF00834 Ribulose-phosphate 3 epimerase family KAB07_00675 PF00394 Multicopper oxidase KAB07_00675 PF07732 Multicopper oxidase KAB07_00675 PF07731 Multicopper oxidase KAB07_00676 PF05275 Copper resistance protein B precursor (CopB) KAB07_00678 PF00893 Small Multidrug Resistance protein KAB07_00679 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAB07_00679 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB07_00680 PF01960 ArgJ family KAB07_00681 PF02445 Quinolinate synthetase A protein KAB07_00686 PF00962 Adenosine/AMP deaminase KAB07_00687 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_00687 PF00107 Zinc-binding dehydrogenase KAB07_00688 PF03466 LysR substrate binding domain KAB07_00688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00689 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_00689 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_00689 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_00690 PF07690 Major Facilitator Superfamily KAB07_00691 PF02515 CoA-transferase family III KAB07_00693 PF00890 FAD binding domain KAB07_00693 PF14537 Cytochrome c3 KAB07_00694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00694 PF03466 LysR substrate binding domain KAB07_00697 PF07690 Major Facilitator Superfamily KAB07_00698 PF03466 LysR substrate binding domain KAB07_00698 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00700 PF01546 Peptidase family M20/M25/M40 KAB07_00700 PF07687 Peptidase dimerisation domain KAB07_00701 PF12833 Helix-turn-helix domain KAB07_00701 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB07_00703 PF01810 LysE type translocator KAB07_00704 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00704 PF03466 LysR substrate binding domain KAB07_00706 PF08267 Cobalamin-independent synthase, N-terminal domain KAB07_00706 PF01717 Cobalamin-independent synthase, Catalytic domain KAB07_00707 PF01613 Flavin reductase like domain KAB07_00710 PF00905 Penicillin binding protein transpeptidase domain KAB07_00713 PF13614 AAA domain KAB07_00714 PF10544 T5orf172 domain KAB07_00723 PF02567 Phenazine biosynthesis-like protein KAB07_00727 PF13360 PQQ-like domain KAB07_00727 PF01011 PQQ enzyme repeat KAB07_00741 PF13756 Stimulus-sensing domain KAB07_00741 PF13755 Sensor N-terminal transmembrane domain KAB07_00741 PF00512 His Kinase A (phospho-acceptor) domain KAB07_00741 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00741 PF00672 HAMP domain KAB07_00742 PF00268 Ribonucleotide reductase, small chain KAB07_00744 PF02867 Ribonucleotide reductase, barrel domain KAB07_00744 PF03477 ATP cone domain KAB07_00744 PF00317 Ribonucleotide reductase, all-alpha domain KAB07_00745 PF00486 Transcriptional regulatory protein, C terminal KAB07_00745 PF00072 Response regulator receiver domain KAB07_00746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_00746 PF00672 HAMP domain KAB07_00746 PF00512 His Kinase A (phospho-acceptor) domain KAB07_00748 PF00990 Diguanylate cyclase, GGDEF domain KAB07_00748 PF17151 Periplasmic sensor domain KAB07_00749 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KAB07_00750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAB07_00751 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAB07_00751 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KAB07_00753 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAB07_00753 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAB07_00753 PF10531 SLBB domain KAB07_00754 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB07_00754 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAB07_00754 PF00384 Molybdopterin oxidoreductase KAB07_00755 PF00146 NADH dehydrogenase KAB07_00756 PF12838 4Fe-4S dicluster domain KAB07_00757 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KAB07_00758 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAB07_00759 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAB07_00759 PF00361 Proton-conducting membrane transporter KAB07_00760 PF00361 Proton-conducting membrane transporter KAB07_00761 PF00361 Proton-conducting membrane transporter KAB07_00763 PF00313 'Cold-shock' DNA-binding domain KAB07_00764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00764 PF03466 LysR substrate binding domain KAB07_00765 PF00175 Oxidoreductase NAD-binding domain KAB07_00765 PF00970 Oxidoreductase FAD-binding domain KAB07_00768 PF05552 Conserved TM helix KAB07_00771 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_00772 PF13533 Biotin-lipoyl like KAB07_00777 PF09334 tRNA synthetases class I (M) KAB07_00777 PF01588 Putative tRNA binding domain KAB07_00779 PF10609 NUBPL iron-transfer P-loop NTPase KAB07_00780 PF01048 Phosphorylase superfamily KAB07_00783 PF00692 dUTPase KAB07_00790 PF01207 Dihydrouridine synthase (Dus) KAB07_00792 PF00448 SRP54-type protein, GTPase domain KAB07_00792 PF02881 SRP54-type protein, helical bundle domain KAB07_00792 PF02978 Signal peptide binding domain KAB07_00793 PF03309 Type III pantothenate kinase KAB07_00795 PF01925 Sulfite exporter TauE/SafE KAB07_00797 PF06470 SMC proteins Flexible Hinge Domain KAB07_00797 PF02463 RecF/RecN/SMC N terminal domain KAB07_00799 PF12826 Helix-hairpin-helix motif KAB07_00799 PF03120 NAD-dependent DNA ligase OB-fold domain KAB07_00799 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAB07_00799 PF01653 NAD-dependent DNA ligase adenylation domain KAB07_00799 PF00533 BRCA1 C Terminus (BRCT) domain KAB07_00800 PF00210 Ferritin-like domain KAB07_00801 PF07690 Major Facilitator Superfamily KAB07_00802 PF00982 Glycosyltransferase family 20 KAB07_00803 PF02358 Trehalose-phosphatase KAB07_00804 PF12697 Alpha/beta hydrolase family KAB07_00804 PF08241 Methyltransferase domain KAB07_00805 PF04055 Radical SAM superfamily KAB07_00805 PF06968 Biotin and Thiamin Synthesis associated domain KAB07_00805 PF00202 Aminotransferase class-III KAB07_00806 PF00155 Aminotransferase class I and II KAB07_00809 PF01479 S4 domain KAB07_00809 PF00849 RNA pseudouridylate synthase KAB07_00810 PF04079 Segregation and condensation complex subunit ScpB KAB07_00811 PF02616 Segregation and condensation protein ScpA KAB07_00812 PF01300 Telomere recombination KAB07_00813 PF04315 Elongation factor P hydroxylase KAB07_00814 PF02620 Large ribosomal RNA subunit accumulation protein YceD KAB07_00815 PF01783 Ribosomal L32p protein family KAB07_00816 PF00698 Acyl transferase domain KAB07_00818 PF00550 Phosphopantetheine attachment site KAB07_00819 PF04972 BON domain KAB07_00819 PF01476 LysM domain KAB07_00820 PF03070 TENA/THI-4/PQQC family KAB07_00820 PF08543 Phosphomethylpyrimidine kinase KAB07_00820 PF02581 Thiamine monophosphate synthase KAB07_00822 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB07_00825 PF02261 Aspartate decarboxylase KAB07_00826 PF01195 Peptidyl-tRNA hydrolase KAB07_00827 PF01386 Ribosomal L25p family KAB07_00828 PF14572 Phosphoribosyl synthetase-associated domain KAB07_00828 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB07_00833 PF03550 Outer membrane lipoprotein LolB KAB07_00835 PF01488 Shikimate / quinate 5-dehydrogenase KAB07_00835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAB07_00835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAB07_00836 PF01807 CHC2 zinc finger KAB07_00836 PF08275 DNA primase catalytic core, N-terminal domain KAB07_00836 PF10410 DnaB-helicase binding domain of primase KAB07_00836 PF08278 DNA primase DnaG DnaB-binding KAB07_00837 PF13525 Outer membrane lipoprotein KAB07_00838 PF00849 RNA pseudouridylate synthase KAB07_00838 PF01479 S4 domain KAB07_00840 PF03358 NADPH-dependent FMN reductase KAB07_00841 PF01668 SmpB protein KAB07_00842 PF01467 Cytidylyltransferase-like KAB07_00843 PF00037 4Fe-4S binding domain KAB07_00846 PF03466 LysR substrate binding domain KAB07_00846 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_00847 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB07_00848 PF02028 BCCT, betaine/carnitine/choline family transporter KAB07_00849 PF07859 alpha/beta hydrolase fold KAB07_00850 PF00355 Rieske [2Fe-2S] domain KAB07_00850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB07_00851 PF00171 Aldehyde dehydrogenase family KAB07_00852 PF00175 Oxidoreductase NAD-binding domain KAB07_00852 PF00970 Oxidoreductase FAD-binding domain KAB07_00852 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_00853 PF00970 Oxidoreductase FAD-binding domain KAB07_00853 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_00853 PF00175 Oxidoreductase NAD-binding domain KAB07_00856 PF02540 NAD synthase KAB07_00856 PF00795 Carbon-nitrogen hydrolase KAB07_00858 PF02678 Pirin KAB07_00858 PF05726 Pirin C-terminal cupin domain KAB07_00860 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_00860 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_00862 PF00164 Ribosomal protein S12/S23 KAB07_00863 PF00177 Ribosomal protein S7p/S5e KAB07_00864 PF00679 Elongation factor G C-terminus KAB07_00864 PF14492 Elongation Factor G, domain II KAB07_00864 PF03764 Elongation factor G, domain IV KAB07_00864 PF00009 Elongation factor Tu GTP binding domain KAB07_00864 PF03144 Elongation factor Tu domain 2 KAB07_00865 PF00009 Elongation factor Tu GTP binding domain KAB07_00865 PF03144 Elongation factor Tu domain 2 KAB07_00865 PF03143 Elongation factor Tu C-terminal domain KAB07_00868 PF00583 Acetyltransferase (GNAT) family KAB07_00869 PF04377 Arginine-tRNA-protein transferase, C terminus KAB07_00869 PF04376 Arginine-tRNA-protein transferase, N terminus KAB07_00870 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KAB07_00871 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_00872 PF01580 FtsK/SpoIIIE family KAB07_00872 PF09397 Ftsk gamma domain KAB07_00872 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAB07_00872 PF17854 FtsK alpha domain KAB07_00873 PF01810 LysE type translocator KAB07_00876 PF03776 Septum formation topological specificity factor MinE KAB07_00877 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAB07_00878 PF03775 Septum formation inhibitor MinC, C-terminal domain KAB07_00880 PF01553 Acyltransferase KAB07_00881 PF13488 Glycine zipper KAB07_00881 PF00691 OmpA family KAB07_00883 PF00580 UvrD/REP helicase N-terminal domain KAB07_00883 PF13361 UvrD-like helicase C-terminal domain KAB07_00884 PF00692 dUTPase KAB07_00885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB07_00885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB07_00885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB07_00885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB07_00886 PF00696 Amino acid kinase family KAB07_00888 PF13230 Glutamine amidotransferases class-II KAB07_00889 PF01814 Hemerythrin HHE cation binding domain KAB07_00891 PF03658 RnfH family Ubiquitin KAB07_00892 PF04355 SmpA / OmlA family KAB07_00893 PF01475 Ferric uptake regulator family KAB07_00894 PF00437 Type II/IV secretion system protein KAB07_00895 PF00437 Type II/IV secretion system protein KAB07_00896 PF01168 Alanine racemase, N-terminal domain KAB07_00898 PF12320 Type 5 capsule protein repressor C-terminal domain KAB07_00898 PF00149 Calcineurin-like phosphoesterase KAB07_00902 PF08338 Domain of unknown function (DUF1731) KAB07_00902 PF01370 NAD dependent epimerase/dehydratase family KAB07_00903 PF01266 FAD dependent oxidoreductase KAB07_00904 PF00490 Delta-aminolevulinic acid dehydratase KAB07_00905 PF03061 Thioesterase superfamily KAB07_00906 PF13533 Biotin-lipoyl like KAB07_00907 PF07690 Major Facilitator Superfamily KAB07_00913 PF13737 Transposase DDE domain KAB07_00918 PF00929 Exonuclease KAB07_00932 PF00145 C-5 cytosine-specific DNA methylase KAB07_00933 PF01555 DNA methylase KAB07_00939 PF01555 DNA methylase KAB07_00941 PF01695 IstB-like ATP binding protein KAB07_00980 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KAB07_00988 PF02767 DNA polymerase III beta subunit, central domain KAB07_00988 PF02768 DNA polymerase III beta subunit, C-terminal domain KAB07_00988 PF00712 DNA polymerase III beta subunit, N-terminal domain KAB07_01015 PF00083 Sugar (and other) transporter KAB07_01016 PF00701 Dihydrodipicolinate synthetase family KAB07_01018 PF08281 Sigma-70, region 4 KAB07_01018 PF04542 Sigma-70 region 2 KAB07_01020 PF07715 TonB-dependent Receptor Plug Domain KAB07_01020 PF00593 TonB dependent receptor KAB07_01024 PF01126 Heme oxygenase KAB07_01029 PF13520 Amino acid permease KAB07_01030 PF02574 Homocysteine S-methyltransferase KAB07_01032 PF06039 Malate:quinone oxidoreductase (Mqo) KAB07_01033 PF00732 GMC oxidoreductase KAB07_01033 PF05199 GMC oxidoreductase KAB07_01034 PF00171 Aldehyde dehydrogenase family KAB07_01035 PF13977 BetI-type transcriptional repressor, C-terminal KAB07_01035 PF00440 Bacterial regulatory proteins, tetR family KAB07_01036 PF02028 BCCT, betaine/carnitine/choline family transporter KAB07_01037 PF02028 BCCT, betaine/carnitine/choline family transporter KAB07_01039 PF03061 Thioesterase superfamily KAB07_01041 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB07_01041 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB07_01042 PF00375 Sodium:dicarboxylate symporter family KAB07_01043 PF07152 YaeQ protein KAB07_01044 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB07_01045 PF01522 Polysaccharide deacetylase KAB07_01045 PF14883 Hypothetical glycosyl hydrolase family 13 KAB07_01046 PF00535 Glycosyl transferase family 2 KAB07_01048 PF00378 Enoyl-CoA hydratase/isomerase KAB07_01051 PF09339 IclR helix-turn-helix domain KAB07_01051 PF01614 Bacterial transcriptional regulator KAB07_01052 PF00355 Rieske [2Fe-2S] domain KAB07_01054 PF00355 Rieske [2Fe-2S] domain KAB07_01056 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB07_01057 PF14759 Reductase C-terminal KAB07_01057 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01058 PF07690 Major Facilitator Superfamily KAB07_01060 PF12697 Alpha/beta hydrolase family KAB07_01062 PF03447 Homoserine dehydrogenase, NAD binding domain KAB07_01062 PF01958 Domain of unknown function DUF108 KAB07_01063 PF00171 Aldehyde dehydrogenase family KAB07_01064 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB07_01064 PF00205 Thiamine pyrophosphate enzyme, central domain KAB07_01064 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB07_01066 PF07690 Major Facilitator Superfamily KAB07_01068 PF01327 Polypeptide deformylase KAB07_01069 PF04960 Glutaminase KAB07_01070 PF12833 Helix-turn-helix domain KAB07_01070 PF02311 AraC-like ligand binding domain KAB07_01071 PF07690 Major Facilitator Superfamily KAB07_01072 PF01263 Aldose 1-epimerase KAB07_01074 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01074 PF03466 LysR substrate binding domain KAB07_01076 PF07690 Major Facilitator Superfamily KAB07_01077 PF00456 Transketolase, thiamine diphosphate binding domain KAB07_01078 PF02779 Transketolase, pyrimidine binding domain KAB07_01078 PF02780 Transketolase, C-terminal domain KAB07_01079 PF02607 B12 binding domain KAB07_01079 PF02310 B12 binding domain KAB07_01079 PF00809 Pterin binding enzyme KAB07_01079 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAB07_01079 PF02574 Homocysteine S-methyltransferase KAB07_01080 PF01384 Phosphate transporter family KAB07_01081 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_01084 PF03781 Sulfatase-modifying factor enzyme 1 KAB07_01085 PF00884 Sulfatase KAB07_01087 PF01106 NifU-like domain KAB07_01087 PF01521 Iron-sulphur cluster biosynthesis KAB07_01088 PF00593 TonB dependent receptor KAB07_01088 PF07715 TonB-dependent Receptor Plug Domain KAB07_01090 PF00561 alpha/beta hydrolase fold KAB07_01091 PF00484 Carbonic anhydrase KAB07_01092 PF13472 GDSL-like Lipase/Acylhydrolase family KAB07_01093 PF00005 ABC transporter KAB07_01095 PF01694 Rhomboid family KAB07_01096 PF00912 Transglycosylase KAB07_01097 PF13090 Polyphosphate kinase C-terminal domain 2 KAB07_01097 PF02503 Polyphosphate kinase middle domain KAB07_01097 PF17941 Polyphosphate kinase C-terminal domain 1 KAB07_01097 PF13089 Polyphosphate kinase N-terminal domain KAB07_01099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01099 PF03466 LysR substrate binding domain KAB07_01100 PF00561 alpha/beta hydrolase fold KAB07_01101 PF18113 Rubredoxin binding C-terminal domain KAB07_01101 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01102 PF00301 Rubredoxin KAB07_01105 PF01336 OB-fold nucleic acid binding domain KAB07_01105 PF00152 tRNA synthetases class II (D, K and N) KAB07_01106 PF14052 Capsule assembly protein Wzi KAB07_01108 PF01507 Phosphoadenosine phosphosulfate reductase family KAB07_01109 PF00009 Elongation factor Tu GTP binding domain KAB07_01112 PF03600 Citrate transporter KAB07_01113 PF00571 CBS domain KAB07_01113 PF03471 Transporter associated domain KAB07_01113 PF01595 Cyclin M transmembrane N-terminal domain KAB07_01114 PF03466 LysR substrate binding domain KAB07_01114 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01115 PF00463 Isocitrate lyase family KAB07_01118 PF01774 UreD urease accessory protein KAB07_01119 PF00547 Urease, gamma subunit KAB07_01120 PF00699 Urease beta subunit KAB07_01121 PF00449 Urease alpha-subunit, N-terminal domain KAB07_01121 PF01979 Amidohydrolase family KAB07_01122 PF05194 UreE urease accessory protein, C-terminal domain KAB07_01122 PF02814 UreE urease accessory protein, N-terminal domain KAB07_01123 PF01730 UreF KAB07_01124 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB07_01127 PF03717 Penicillin-binding Protein dimerisation domain KAB07_01127 PF00905 Penicillin binding protein transpeptidase domain KAB07_01130 PF05191 Adenylate kinase, active site lid KAB07_01131 PF00633 Helix-hairpin-helix motif KAB07_01131 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB07_01131 PF10576 Iron-sulfur binding domain of endonuclease III KAB07_01132 PF04060 Putative Fe-S cluster KAB07_01133 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB07_01133 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB07_01135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAB07_01136 PF02590 Predicted SPOUT methyltransferase KAB07_01137 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB07_01137 PF00004 ATPase family associated with various cellular activities (AAA) KAB07_01137 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAB07_01138 PF13018 Extended Signal Peptide of Type V secretion system KAB07_01138 PF03895 YadA-like membrane anchor domain KAB07_01138 PF05658 Head domain of trimeric autotransporter adhesin KAB07_01138 PF05662 Coiled stalk of trimeric autotransporter adhesin KAB07_01140 PF01812 5-formyltetrahydrofolate cyclo-ligase family KAB07_01205 PF01551 Peptidase family M23 KAB07_01205 PF08525 Opacity-associated protein A N-terminal motif KAB07_01205 PF01476 LysM domain KAB07_01214 PF00884 Sulfatase KAB07_01214 PF08019 Phosphoethanolamine transferase EptA/EptB KAB07_01221 PF00557 Metallopeptidase family M24 KAB07_01221 PF05195 Aminopeptidase P, N-terminal domain KAB07_01222 PF01494 FAD binding domain KAB07_01223 PF01494 FAD binding domain KAB07_01225 PF13411 MerR HTH family regulatory protein KAB07_01227 PF01810 LysE type translocator KAB07_01228 PF03466 LysR substrate binding domain KAB07_01228 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB07_01231 PF02021 Uncharacterised protein family UPF0102 KAB07_01232 PF04972 BON domain KAB07_01234 PF09297 NADH pyrophosphatase zinc ribbon domain KAB07_01234 PF00293 NUDIX domain KAB07_01236 PF00929 Exonuclease KAB07_01237 PF01464 Transglycosylase SLT domain KAB07_01237 PF01476 LysM domain KAB07_01237 PF01464 Transglycosylase SLT domain KAB07_01237 PF01476 LysM domain KAB07_01238 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAB07_01239 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01240 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01240 PF12911 N-terminal TM domain of oligopeptide transport permease C KAB07_01241 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB07_01241 PF00005 ABC transporter KAB07_01242 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01242 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB07_01243 PF07715 TonB-dependent Receptor Plug Domain KAB07_01243 PF00593 TonB dependent receptor KAB07_01245 PF00929 Exonuclease KAB07_01246 PF01979 Amidohydrolase family KAB07_01247 PF01590 GAF domain KAB07_01247 PF00563 EAL domain KAB07_01247 PF00990 Diguanylate cyclase, GGDEF domain KAB07_01247 PF00360 Phytochrome region KAB07_01248 PF00764 Arginosuccinate synthase KAB07_01249 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01249 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB07_01252 PF05987 Bacterial protein of unknown function (DUF898) KAB07_01253 PF03180 NLPA lipoprotein KAB07_01256 PF16671 Actin cross-linking domain KAB07_01256 PF04717 Type VI secretion system, phage-baseplate injector KAB07_01257 PF03527 RHS protein KAB07_01257 PF05593 RHS Repeat KAB07_01258 PF13610 DDE domain KAB07_01259 PF00743 Flavin-binding monooxygenase-like KAB07_01260 PF00106 short chain dehydrogenase KAB07_01262 PF17932 Tetracyclin repressor-like, C-terminal domain KAB07_01262 PF00440 Bacterial regulatory proteins, tetR family KAB07_01263 PF17954 Quercetinase C-terminal cupin domain KAB07_01263 PF02678 Pirin KAB07_01265 PF00106 short chain dehydrogenase KAB07_01266 PF00743 Flavin-binding monooxygenase-like KAB07_01268 PF00860 Permease family KAB07_01269 PF00962 Adenosine/AMP deaminase KAB07_01270 PF01292 Prokaryotic cytochrome b561 KAB07_01272 PF01351 Ribonuclease HII KAB07_01273 PF02599 Global regulator protein family KAB07_01274 PF13840 ACT domain KAB07_01274 PF01842 ACT domain KAB07_01274 PF00696 Amino acid kinase family KAB07_01275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAB07_01275 PF01411 tRNA synthetases class II (A) KAB07_01275 PF02272 DHHA1 domain KAB07_01276 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB07_01276 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB07_01277 PF13393 Histidyl-tRNA synthetase KAB07_01278 PF00709 Adenylosuccinate synthetase KAB07_01281 PF00248 Aldo/keto reductase family KAB07_01284 PF00027 Cyclic nucleotide-binding domain KAB07_01284 PF13545 Crp-like helix-turn-helix domain KAB07_01285 PF02566 OsmC-like protein KAB07_01288 PF10431 C-terminal, D2-small domain, of ClpB protein KAB07_01288 PF07724 AAA domain (Cdc48 subfamily) KAB07_01288 PF00004 ATPase family associated with various cellular activities (AAA) KAB07_01288 PF02861 Clp amino terminal domain, pathogenicity island component KAB07_01288 PF17871 AAA lid domain KAB07_01291 PF01170 Putative RNA methylase family UPF0020 KAB07_01291 PF02926 THUMP domain KAB07_01291 PF10672 S-adenosylmethionine-dependent methyltransferase KAB07_01293 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB07_01293 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB07_01294 PF01979 Amidohydrolase family KAB07_01295 PF13488 Glycine zipper KAB07_01295 PF00691 OmpA family KAB07_01297 PF00043 Glutathione S-transferase, C-terminal domain KAB07_01297 PF13417 Glutathione S-transferase, N-terminal domain KAB07_01298 PF02390 Putative methyltransferase KAB07_01300 PF02798 Glutathione S-transferase, N-terminal domain KAB07_01300 PF00043 Glutathione S-transferase, C-terminal domain KAB07_01302 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01302 PF13192 Thioredoxin domain KAB07_01306 PF00578 AhpC/TSA family KAB07_01306 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB07_01307 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KAB07_01307 PF11898 Domain of unknown function (DUF3418) KAB07_01307 PF00271 Helicase conserved C-terminal domain KAB07_01307 PF00270 DEAD/DEAH box helicase KAB07_01307 PF04408 Helicase associated domain (HA2) KAB07_01308 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAB07_01308 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAB07_01310 PF07690 Major Facilitator Superfamily KAB07_01311 PF03594 Benzoate membrane transport protein KAB07_01312 PF00106 short chain dehydrogenase KAB07_01313 PF00970 Oxidoreductase FAD-binding domain KAB07_01313 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_01313 PF00175 Oxidoreductase NAD-binding domain KAB07_01314 PF00866 Ring hydroxylating beta subunit KAB07_01315 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB07_01315 PF00355 Rieske [2Fe-2S] domain KAB07_01316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01316 PF03466 LysR substrate binding domain KAB07_01318 PF00403 Heavy-metal-associated domain KAB07_01319 PF09278 MerR, DNA binding KAB07_01319 PF00376 MerR family regulatory protein KAB07_01326 PF02601 Exonuclease VII, large subunit KAB07_01326 PF13742 OB-fold nucleic acid binding domain KAB07_01333 PF01810 LysE type translocator KAB07_01334 PF00313 'Cold-shock' DNA-binding domain KAB07_01336 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAB07_01336 PF03807 NADP oxidoreductase coenzyme F420-dependent KAB07_01341 PF07690 Major Facilitator Superfamily KAB07_01342 PF01638 HxlR-like helix-turn-helix KAB07_01348 PF09190 DALR domain KAB07_01348 PF01406 tRNA synthetases class I (C) catalytic domain KAB07_01349 PF01380 SIS domain KAB07_01349 PF00571 CBS domain KAB07_01352 PF03968 OstA-like protein KAB07_01353 PF00005 ABC transporter KAB07_01353 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAB07_01354 PF02321 Outer membrane efflux protein KAB07_01355 PF03412 Peptidase C39 family KAB07_01355 PF00005 ABC transporter KAB07_01355 PF00664 ABC transporter transmembrane region KAB07_01357 PF01205 Uncharacterized protein family UPF0029 KAB07_01358 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_01360 PF01596 O-methyltransferase KAB07_01362 PF11953 Domain of unknown function (DUF3470) KAB07_01362 PF00037 4Fe-4S binding domain KAB07_01364 PF01624 MutS domain I KAB07_01364 PF05192 MutS domain III KAB07_01364 PF05190 MutS family domain IV KAB07_01364 PF00488 MutS domain V KAB07_01364 PF05188 MutS domain II KAB07_01365 PF01037 Lrp/AsnC ligand binding domain KAB07_01366 PF00892 EamA-like transporter family KAB07_01367 PF03707 Bacterial signalling protein N terminal repeat KAB07_01367 PF00990 Diguanylate cyclase, GGDEF domain KAB07_01367 PF00563 EAL domain KAB07_01368 PF03279 Bacterial lipid A biosynthesis acyltransferase KAB07_01370 PF07690 Major Facilitator Superfamily KAB07_01374 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB07_01374 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB07_01377 PF13419 Haloacid dehalogenase-like hydrolase KAB07_01379 PF16671 Actin cross-linking domain KAB07_01379 PF04717 Type VI secretion system, phage-baseplate injector KAB07_01380 PF05593 RHS Repeat KAB07_01380 PF14220 Domain of unknown function (DUF4329) KAB07_01380 PF03527 RHS protein KAB07_01383 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01383 PF03466 LysR substrate binding domain KAB07_01384 PF01566 Natural resistance-associated macrophage protein KAB07_01385 PF03746 LamB/YcsF family KAB07_01386 PF07286 Protein of unknown function (DUF1445) KAB07_01388 PF00289 Biotin carboxylase, N-terminal domain KAB07_01388 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB07_01388 PF00364 Biotin-requiring enzyme KAB07_01388 PF02785 Biotin carboxylase C-terminal domain KAB07_01389 PF00654 Voltage gated chloride channel KAB07_01394 PF00440 Bacterial regulatory proteins, tetR family KAB07_01396 PF00107 Zinc-binding dehydrogenase KAB07_01396 PF13823 Alcohol dehydrogenase GroES-associated KAB07_01396 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_01399 PF00289 Biotin carboxylase, N-terminal domain KAB07_01399 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB07_01399 PF02785 Biotin carboxylase C-terminal domain KAB07_01400 PF02525 Flavodoxin-like fold KAB07_01401 PF01638 HxlR-like helix-turn-helix KAB07_01404 PF08753 NikR C terminal nickel binding domain KAB07_01404 PF01402 Ribbon-helix-helix protein, copG family KAB07_01405 PF01425 Amidase KAB07_01406 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB07_01407 PF00005 ABC transporter KAB07_01412 PF09278 MerR, DNA binding KAB07_01412 PF00376 MerR family regulatory protein KAB07_01415 PF00701 Dihydrodipicolinate synthetase family KAB07_01417 PF00392 Bacterial regulatory proteins, gntR family KAB07_01418 PF05544 Proline racemase KAB07_01419 PF01266 FAD dependent oxidoreductase KAB07_01421 PF04324 BFD-like [2Fe-2S] binding domain KAB07_01421 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01423 PF00083 Sugar (and other) transporter KAB07_01424 PF00171 Aldehyde dehydrogenase family KAB07_01425 PF13520 Amino acid permease KAB07_01426 PF03315 Serine dehydratase beta chain KAB07_01426 PF03313 Serine dehydratase alpha chain KAB07_01427 PF01575 MaoC like domain KAB07_01427 PF00171 Aldehyde dehydrogenase family KAB07_01428 PF05138 Phenylacetic acid catabolic protein KAB07_01429 PF06243 Phenylacetic acid degradation B KAB07_01430 PF05138 Phenylacetic acid catabolic protein KAB07_01431 PF01883 Iron-sulfur cluster assembly protein KAB07_01432 PF00970 Oxidoreductase FAD-binding domain KAB07_01432 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_01432 PF00175 Oxidoreductase NAD-binding domain KAB07_01433 PF00378 Enoyl-CoA hydratase/isomerase KAB07_01434 PF00378 Enoyl-CoA hydratase/isomerase KAB07_01435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB07_01435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB07_01435 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB07_01436 PF02803 Thiolase, C-terminal domain KAB07_01436 PF00108 Thiolase, N-terminal domain KAB07_01437 PF14535 AMP-binding enzyme C-terminal domain KAB07_01437 PF00501 AMP-binding enzyme KAB07_01438 PF08223 PaaX-like protein C-terminal domain KAB07_01438 PF07848 PaaX-like protein KAB07_01439 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_01440 PF03061 Thioesterase superfamily KAB07_01447 PF00199 Catalase KAB07_01448 PF01292 Prokaryotic cytochrome b561 KAB07_01452 PF12697 Alpha/beta hydrolase family KAB07_01453 PF01613 Flavin reductase like domain KAB07_01454 PF00296 Luciferase-like monooxygenase KAB07_01455 PF00171 Aldehyde dehydrogenase family KAB07_01456 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB07_01458 PF00171 Aldehyde dehydrogenase family KAB07_01459 PF02627 Carboxymuconolactone decarboxylase family KAB07_01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01460 PF03466 LysR substrate binding domain KAB07_01461 PF02525 Flavodoxin-like fold KAB07_01462 PF09339 IclR helix-turn-helix domain KAB07_01462 PF01614 Bacterial transcriptional regulator KAB07_01463 PF01494 FAD binding domain KAB07_01464 PF00392 Bacterial regulatory proteins, gntR family KAB07_01464 PF07702 UTRA domain KAB07_01466 PF00005 ABC transporter KAB07_01466 PF08402 TOBE domain KAB07_01467 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01468 PF01266 FAD dependent oxidoreductase KAB07_01469 PF00266 Aminotransferase class-V KAB07_01470 PF13419 Haloacid dehalogenase-like hydrolase KAB07_01471 PF07690 Major Facilitator Superfamily KAB07_01472 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01472 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01472 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01473 PF02515 CoA-transferase family III KAB07_01474 PF09339 IclR helix-turn-helix domain KAB07_01475 PF00378 Enoyl-CoA hydratase/isomerase KAB07_01476 PF03060 Nitronate monooxygenase KAB07_01477 PF07690 Major Facilitator Superfamily KAB07_01478 PF09339 IclR helix-turn-helix domain KAB07_01479 PF02803 Thiolase, C-terminal domain KAB07_01479 PF00108 Thiolase, N-terminal domain KAB07_01480 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KAB07_01480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB07_01480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB07_01482 PF00378 Enoyl-CoA hydratase/isomerase KAB07_01483 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01483 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01483 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01484 PF07690 Major Facilitator Superfamily KAB07_01485 PF01144 Coenzyme A transferase KAB07_01486 PF01144 Coenzyme A transferase KAB07_01488 PF07690 Major Facilitator Superfamily KAB07_01490 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01490 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB07_01493 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01493 PF03466 LysR substrate binding domain KAB07_01494 PF00682 HMGL-like KAB07_01495 PF02785 Biotin carboxylase C-terminal domain KAB07_01495 PF00364 Biotin-requiring enzyme KAB07_01495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB07_01495 PF00289 Biotin carboxylase, N-terminal domain KAB07_01496 PF00378 Enoyl-CoA hydratase/isomerase KAB07_01497 PF01039 Carboxyl transferase domain KAB07_01498 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01498 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01498 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01499 PF00440 Bacterial regulatory proteins, tetR family KAB07_01500 PF13193 AMP-binding enzyme C-terminal domain KAB07_01500 PF00501 AMP-binding enzyme KAB07_01501 PF00501 AMP-binding enzyme KAB07_01501 PF13193 AMP-binding enzyme C-terminal domain KAB07_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01505 PF03466 LysR substrate binding domain KAB07_01513 PF02464 Competence-damaged protein KAB07_01513 PF00994 Probable molybdopterin binding domain KAB07_01513 PF18146 Damage-inducible protein CinA KH domain KAB07_01515 PF18011 C-terminal domain found in long catalases KAB07_01515 PF00199 Catalase KAB07_01515 PF06628 Catalase-related immune-responsive KAB07_01520 PF00717 Peptidase S24-like KAB07_01522 PF01037 Lrp/AsnC ligand binding domain KAB07_01522 PF13404 AsnC-type helix-turn-helix domain KAB07_01524 PF09308 LuxQ, periplasmic KAB07_01524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_01524 PF00072 Response regulator receiver domain KAB07_01524 PF00512 His Kinase A (phospho-acceptor) domain KAB07_01525 PF00072 Response regulator receiver domain KAB07_01527 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01528 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01529 PF00005 ABC transporter KAB07_01530 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB07_01531 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB07_01532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01532 PF03466 LysR substrate binding domain KAB07_01533 PF01810 LysE type translocator KAB07_01534 PF00266 Aminotransferase class-V KAB07_01536 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_01537 PF00581 Rhodanese-like domain KAB07_01539 PF03466 LysR substrate binding domain KAB07_01539 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01540 PF02798 Glutathione S-transferase, N-terminal domain KAB07_01541 PF02798 Glutathione S-transferase, N-terminal domain KAB07_01541 PF14834 Glutathione S-transferase, C-terminal domain KAB07_01542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01542 PF03466 LysR substrate binding domain KAB07_01543 PF03788 LrgA family KAB07_01544 PF04172 LrgB-like family KAB07_01545 PF00155 Aminotransferase class I and II KAB07_01545 PF00392 Bacterial regulatory proteins, gntR family KAB07_01548 PF07690 Major Facilitator Superfamily KAB07_01549 PF16957 Malonate decarboxylase, alpha subunit, transporter KAB07_01550 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KAB07_01551 PF06857 Malonate decarboxylase delta subunit (MdcD) KAB07_01552 PF01039 Carboxyl transferase domain KAB07_01554 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KAB07_01555 PF00698 Acyl transferase domain KAB07_01558 PF03466 LysR substrate binding domain KAB07_01558 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01559 PF00155 Aminotransferase class I and II KAB07_01559 PF00392 Bacterial regulatory proteins, gntR family KAB07_01561 PF02322 Cytochrome bd terminal oxidase subunit II KAB07_01562 PF01654 Cytochrome bd terminal oxidase subunit I KAB07_01564 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01564 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01564 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01565 PF00296 Luciferase-like monooxygenase KAB07_01566 PF00083 Sugar (and other) transporter KAB07_01569 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB07_01570 PF00005 ABC transporter KAB07_01571 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01572 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KAB07_01573 PF01177 Asp/Glu/Hydantoin racemase KAB07_01574 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB07_01576 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01576 PF03466 LysR substrate binding domain KAB07_01578 PF13382 Adenine deaminase C-terminal domain KAB07_01578 PF01979 Amidohydrolase family KAB07_01580 PF03960 ArsC family KAB07_01581 PF01022 Bacterial regulatory protein, arsR family KAB07_01582 PF01758 Sodium Bile acid symporter family KAB07_01583 PF03466 LysR substrate binding domain KAB07_01583 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01586 PF13192 Thioredoxin domain KAB07_01586 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01589 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_01590 PF00588 SpoU rRNA Methylase family KAB07_01591 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAB07_01591 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAB07_01591 PF14579 Helix-hairpin-helix motif KAB07_01591 PF02811 PHP domain KAB07_01591 PF01336 OB-fold nucleic acid binding domain KAB07_01592 PF00710 Asparaginase, N-terminal KAB07_01592 PF17763 Glutaminase/Asparaginase C-terminal domain KAB07_01593 PF00375 Sodium:dicarboxylate symporter family KAB07_01594 PF00155 Aminotransferase class I and II KAB07_01595 PF01641 SelR domain KAB07_01596 PF00255 Glutathione peroxidase KAB07_01597 PF12833 Helix-turn-helix domain KAB07_01597 PF12852 Cupin KAB07_01599 PF00155 Aminotransferase class I and II KAB07_01600 PF08335 GlnD PII-uridylyltransferase KAB07_01600 PF01966 HD domain KAB07_01600 PF01909 Nucleotidyltransferase domain KAB07_01601 PF02222 ATP-grasp domain KAB07_01603 PF05437 Branched-chain amino acid transport protein (AzlD) KAB07_01604 PF03591 AzlC protein KAB07_01609 PF01926 50S ribosome-binding GTPase KAB07_01609 PF06071 Protein of unknown function (DUF933) KAB07_01610 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01611 PF00005 ABC transporter KAB07_01611 PF09383 NIL domain KAB07_01612 PF03180 NLPA lipoprotein KAB07_01613 PF03180 NLPA lipoprotein KAB07_01614 PF00296 Luciferase-like monooxygenase KAB07_01616 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01616 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01619 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01620 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01621 PF00005 ABC transporter KAB07_01623 PF01037 Lrp/AsnC ligand binding domain KAB07_01626 PF01709 Transcriptional regulator KAB07_01628 PF00440 Bacterial regulatory proteins, tetR family KAB07_01633 PF03466 LysR substrate binding domain KAB07_01633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01635 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KAB07_01637 PF00892 EamA-like transporter family KAB07_01641 PF13954 PapC N-terminal domain KAB07_01641 PF00577 Outer membrane usher protein KAB07_01641 PF13953 PapC C-terminal domain KAB07_01642 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB07_01642 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB07_01643 PF16970 Type-1 fimbrial protein, A KAB07_01646 PF04055 Radical SAM superfamily KAB07_01646 PF06968 Biotin and Thiamin Synthesis associated domain KAB07_01647 PF08331 Domain of unknown function (DUF1730) KAB07_01648 PF03853 YjeF-related protein N-terminus KAB07_01648 PF01256 Carbohydrate kinase KAB07_01649 PF02075 Crossover junction endodeoxyribonuclease RuvC KAB07_01652 PF00905 Penicillin binding protein transpeptidase domain KAB07_01656 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAB07_01656 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAB07_01656 PF02772 S-adenosylmethionine synthetase, central domain KAB07_01657 PF00456 Transketolase, thiamine diphosphate binding domain KAB07_01657 PF02780 Transketolase, C-terminal domain KAB07_01657 PF02779 Transketolase, pyrimidine binding domain KAB07_01659 PF04264 YceI-like domain KAB07_01661 PF09992 Phosphodiester glycosidase KAB07_01663 PF05958 tRNA (Uracil-5-)-methyltransferase KAB07_01664 PF04229 GrpB protein KAB07_01665 PF14850 DNA-binding domain of Proline dehydrogenase KAB07_01665 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KAB07_01665 PF01619 Proline dehydrogenase KAB07_01665 PF00171 Aldehyde dehydrogenase family KAB07_01666 PF01037 Lrp/AsnC ligand binding domain KAB07_01667 PF00474 Sodium:solute symporter family KAB07_01668 PF02146 Sir2 family KAB07_01669 PF01597 Glycine cleavage H-protein KAB07_01670 PF12833 Helix-turn-helix domain KAB07_01670 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAB07_01672 PF00664 ABC transporter transmembrane region KAB07_01672 PF00005 ABC transporter KAB07_01673 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KAB07_01674 PF06912 Protein of unknown function (DUF1275) KAB07_01675 PF00375 Sodium:dicarboxylate symporter family KAB07_01678 PF08007 Cupin superfamily protein KAB07_01679 PF02545 Maf-like protein KAB07_01681 PF00162 Phosphoglycerate kinase KAB07_01683 PF01116 Fructose-bisphosphate aldolase class-II KAB07_01684 PF09312 SurA N-terminal domain KAB07_01684 PF00639 PPIC-type PPIASE domain KAB07_01685 PF03968 OstA-like protein KAB07_01685 PF04453 LPS transport system D KAB07_01686 PF01636 Phosphotransferase enzyme family KAB07_01687 PF00483 Nucleotidyl transferase KAB07_01688 PF02527 rRNA small subunit methyltransferase G KAB07_01689 PF13614 AAA domain KAB07_01690 PF02195 ParB-like nuclease domain KAB07_01690 PF17762 HTH domain found in ParB protein KAB07_01691 PF01618 MotA/TolQ/ExbB proton channel family KAB07_01693 PF00664 ABC transporter transmembrane region KAB07_01693 PF00005 ABC transporter KAB07_01694 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAB07_01695 PF02348 Cytidylyltransferase KAB07_01696 PF09115 DNA polymerase III, delta subunit, C terminal KAB07_01698 PF01026 TatD related DNase KAB07_01701 PF07963 Prokaryotic N-terminal methylation motif KAB07_01701 PF02501 Type II secretion system (T2SS), protein I KAB07_01702 PF07963 Prokaryotic N-terminal methylation motif KAB07_01702 PF11612 Type II secretion system (T2SS), protein J KAB07_01703 PF03934 Type II secretion system (T2SS), protein K KAB07_01705 PF03167 Uracil DNA glycosylase superfamily KAB07_01707 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAB07_01709 PF02224 Cytidylate kinase KAB07_01710 PF00575 S1 RNA binding domain KAB07_01711 PF00216 Bacterial DNA-binding protein KAB07_01713 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAB07_01715 PF00743 Flavin-binding monooxygenase-like KAB07_01717 PF03969 AFG1-like ATPase KAB07_01718 PF01274 Malate synthase KAB07_01720 PF02472 Biopolymer transport protein ExbD/TolR KAB07_01721 PF02472 Biopolymer transport protein ExbD/TolR KAB07_01722 PF01618 MotA/TolQ/ExbB proton channel family KAB07_01725 PF07715 TonB-dependent Receptor Plug Domain KAB07_01725 PF00593 TonB dependent receptor KAB07_01729 PF01432 Peptidase family M3 KAB07_01730 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01731 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01732 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAB07_01732 PF00005 ABC transporter KAB07_01735 PF00459 Inositol monophosphatase family KAB07_01737 PF01649 Ribosomal protein S20 KAB07_01738 PF13460 NAD(P)H-binding KAB07_01739 PF03737 Aldolase/RraA KAB07_01743 PF03461 TRCF domain KAB07_01743 PF17757 UvrB interaction domain KAB07_01743 PF02559 CarD-like/TRCF domain KAB07_01743 PF00270 DEAD/DEAH box helicase KAB07_01743 PF00271 Helicase conserved C-terminal domain KAB07_01745 PF00211 Adenylate and Guanylate cyclase catalytic domain KAB07_01746 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_01747 PF00012 Hsp70 protein KAB07_01748 PF07743 HSCB C-terminal oligomerisation domain KAB07_01748 PF00226 DnaJ domain KAB07_01749 PF01521 Iron-sulphur cluster biosynthesis KAB07_01750 PF01592 NifU-like N terminal domain KAB07_01751 PF00266 Aminotransferase class-V KAB07_01752 PF02082 Transcriptional regulator KAB07_01755 PF00216 Bacterial DNA-binding protein KAB07_01756 PF00639 PPIC-type PPIASE domain KAB07_01756 PF09312 SurA N-terminal domain KAB07_01757 PF12833 Helix-turn-helix domain KAB07_01757 PF12852 Cupin KAB07_01758 PF00487 Fatty acid desaturase KAB07_01759 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01759 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01759 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01760 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_01760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_01760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_01761 PF03109 ABC1 family KAB07_01763 PF04073 Aminoacyl-tRNA editing domain KAB07_01764 PF04183 IucA / IucC family KAB07_01764 PF06276 Ferric iron reductase FhuF-like transporter KAB07_01765 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB07_01766 PF07690 Major Facilitator Superfamily KAB07_01767 PF04183 IucA / IucC family KAB07_01767 PF06276 Ferric iron reductase FhuF-like transporter KAB07_01768 PF06276 Ferric iron reductase FhuF-like transporter KAB07_01768 PF04183 IucA / IucC family KAB07_01771 PF07715 TonB-dependent Receptor Plug Domain KAB07_01771 PF00593 TonB dependent receptor KAB07_01776 PF13419 Haloacid dehalogenase-like hydrolase KAB07_01778 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KAB07_01779 PF02277 Phosphoribosyltransferase KAB07_01782 PF02654 Cobalamin-5-phosphate synthase KAB07_01783 PF00793 DAHP synthetase I family KAB07_01784 PF01925 Sulfite exporter TauE/SafE KAB07_01788 PF00593 TonB dependent receptor KAB07_01788 PF07715 TonB-dependent Receptor Plug Domain KAB07_01789 PF02684 Lipid-A-disaccharide synthetase KAB07_01791 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_01792 PF00005 ABC transporter KAB07_01799 PF01230 HIT domain KAB07_01805 PF08241 Methyltransferase domain KAB07_01806 PF00561 alpha/beta hydrolase fold KAB07_01807 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB07_01809 PF02575 YbaB/EbfC DNA-binding family KAB07_01810 PF13662 Toprim domain KAB07_01810 PF02132 RecR protein KAB07_01811 PF00570 HRDC domain KAB07_01811 PF01612 3'-5' exonuclease KAB07_01815 PF05166 YcgL domain KAB07_01817 PF01434 Peptidase family M41 KAB07_01817 PF00004 ATPase family associated with various cellular activities (AAA) KAB07_01817 PF17862 AAA+ lid domain KAB07_01819 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_01820 PF05175 Methyltransferase small domain KAB07_01821 PF01264 Chorismate synthase KAB07_01822 PF08448 PAS fold KAB07_01822 PF00990 Diguanylate cyclase, GGDEF domain KAB07_01825 PF04055 Radical SAM superfamily KAB07_01826 PF00676 Dehydrogenase E1 component KAB07_01827 PF02780 Transketolase, C-terminal domain KAB07_01827 PF02779 Transketolase, pyrimidine binding domain KAB07_01828 PF00364 Biotin-requiring enzyme KAB07_01828 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB07_01828 PF02817 e3 binding domain KAB07_01829 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB07_01829 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_01830 PF00106 short chain dehydrogenase KAB07_01831 PF00107 Zinc-binding dehydrogenase KAB07_01831 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_01832 PF01062 Bestrophin, RFP-TM, chloride channel KAB07_01833 PF00158 Sigma-54 interaction domain KAB07_01833 PF00072 Response regulator receiver domain KAB07_01833 PF02954 Bacterial regulatory protein, Fis family KAB07_01834 PF00753 Metallo-beta-lactamase superfamily KAB07_01834 PF04273 Putative phosphatase (DUF442) KAB07_01835 PF00753 Metallo-beta-lactamase superfamily KAB07_01835 PF04273 Putative phosphatase (DUF442) KAB07_01836 PF01925 Sulfite exporter TauE/SafE KAB07_01839 PF06445 GyrI-like small molecule binding domain KAB07_01839 PF12833 Helix-turn-helix domain KAB07_01840 PF01638 HxlR-like helix-turn-helix KAB07_01841 PF02525 Flavodoxin-like fold KAB07_01846 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAB07_01847 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01848 PF00005 ABC transporter KAB07_01851 PF00083 Sugar (and other) transporter KAB07_01852 PF00593 TonB dependent receptor KAB07_01852 PF07715 TonB-dependent Receptor Plug Domain KAB07_01853 PF00206 Lyase KAB07_01853 PF10415 Fumarase C C-terminus KAB07_01856 PF03466 LysR substrate binding domain KAB07_01856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01857 PF03466 LysR substrate binding domain KAB07_01857 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01858 PF00108 Thiolase, N-terminal domain KAB07_01858 PF02803 Thiolase, C-terminal domain KAB07_01859 PF02667 Short chain fatty acid transporter KAB07_01860 PF01144 Coenzyme A transferase KAB07_01861 PF01144 Coenzyme A transferase KAB07_01862 PF03466 LysR substrate binding domain KAB07_01862 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01868 PF13737 Transposase DDE domain KAB07_01869 PF12833 Helix-turn-helix domain KAB07_01869 PF06719 AraC-type transcriptional regulator N-terminus KAB07_01870 PF07690 Major Facilitator Superfamily KAB07_01871 PF01738 Dienelactone hydrolase family KAB07_01874 PF01613 Flavin reductase like domain KAB07_01876 PF12833 Helix-turn-helix domain KAB07_01876 PF14525 AraC-binding-like domain KAB07_01877 PF00970 Oxidoreductase FAD-binding domain KAB07_01877 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_01877 PF00175 Oxidoreductase NAD-binding domain KAB07_01878 PF00866 Ring hydroxylating beta subunit KAB07_01879 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB07_01879 PF00355 Rieske [2Fe-2S] domain KAB07_01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01880 PF03459 TOBE domain KAB07_01882 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_01883 PF03459 TOBE domain KAB07_01883 PF00005 ABC transporter KAB07_01884 PF00106 short chain dehydrogenase KAB07_01885 PF00857 Isochorismatase family KAB07_01885 PF00550 Phosphopantetheine attachment site KAB07_01887 PF00149 Calcineurin-like phosphoesterase KAB07_01888 PF13089 Polyphosphate kinase N-terminal domain KAB07_01888 PF13090 Polyphosphate kinase C-terminal domain 2 KAB07_01888 PF02503 Polyphosphate kinase middle domain KAB07_01888 PF17941 Polyphosphate kinase C-terminal domain 1 KAB07_01889 PF12706 Beta-lactamase superfamily domain KAB07_01890 PF03070 TENA/THI-4/PQQC family KAB07_01891 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KAB07_01892 PF04055 Radical SAM superfamily KAB07_01892 PF13186 Iron-sulfur cluster-binding domain KAB07_01893 PF01244 Membrane dipeptidase (Peptidase family M19) KAB07_01897 PF13091 PLD-like domain KAB07_01900 PF00199 Catalase KAB07_01902 PF00107 Zinc-binding dehydrogenase KAB07_01902 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_01904 PF00419 Fimbrial protein KAB07_01905 PF13954 PapC N-terminal domain KAB07_01905 PF13953 PapC C-terminal domain KAB07_01905 PF00577 Outer membrane usher protein KAB07_01906 PF02753 Pili assembly chaperone PapD, C-terminal domain KAB07_01906 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAB07_01909 PF16970 Type-1 fimbrial protein, A KAB07_01913 PF01266 FAD dependent oxidoreductase KAB07_01916 PF01593 Flavin containing amine oxidoreductase KAB07_01917 PF00743 Flavin-binding monooxygenase-like KAB07_01918 PF12146 Serine aminopeptidase, S33 KAB07_01919 PF02321 Outer membrane efflux protein KAB07_01920 PF00873 AcrB/AcrD/AcrF family KAB07_01921 PF00529 HlyD membrane-fusion protein of T1SS KAB07_01921 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_01922 PF00486 Transcriptional regulatory protein, C terminal KAB07_01922 PF00072 Response regulator receiver domain KAB07_01923 PF00512 His Kinase A (phospho-acceptor) domain KAB07_01923 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_01923 PF16527 Two-component sensor protein CpxA, periplasmic domain KAB07_01923 PF00672 HAMP domain KAB07_01925 PF02311 AraC-like ligand binding domain KAB07_01925 PF12833 Helix-turn-helix domain KAB07_01926 PF12146 Serine aminopeptidase, S33 KAB07_01937 PF02824 TGS domain KAB07_01937 PF04607 Region found in RelA / SpoT proteins KAB07_01937 PF13291 ACT domain KAB07_01939 PF01975 Survival protein SurE KAB07_01944 PF07690 Major Facilitator Superfamily KAB07_01945 PF13533 Biotin-lipoyl like KAB07_01946 PF01425 Amidase KAB07_01947 PF00196 Bacterial regulatory proteins, luxR family KAB07_01962 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB07_01963 PF14572 Phosphoribosyl synthetase-associated domain KAB07_01963 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAB07_01967 PF00005 ABC transporter KAB07_01970 PF00107 Zinc-binding dehydrogenase KAB07_01970 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_01973 PF06719 AraC-type transcriptional regulator N-terminus KAB07_01973 PF12833 Helix-turn-helix domain KAB07_01974 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAB07_01974 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAB07_01975 PF07690 Major Facilitator Superfamily KAB07_01976 PF01370 NAD dependent epimerase/dehydratase family KAB07_01977 PF03466 LysR substrate binding domain KAB07_01977 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01979 PF00920 Dehydratase family KAB07_01980 PF00171 Aldehyde dehydrogenase family KAB07_01983 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_01983 PF00529 HlyD membrane-fusion protein of T1SS KAB07_01987 PF03737 Aldolase/RraA KAB07_01988 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB07_01988 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB07_01988 PF01842 ACT domain KAB07_01989 PF07690 Major Facilitator Superfamily KAB07_01993 PF03466 LysR substrate binding domain KAB07_01993 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_01995 PF08450 SMP-30/Gluconolactonase/LRE-like region KAB07_01998 PF04909 Amidohydrolase KAB07_01999 PF07690 Major Facilitator Superfamily KAB07_02002 PF05860 haemagglutination activity domain KAB07_02002 PF04829 Pre-toxin domain with VENN motif KAB07_02002 PF13018 Extended Signal Peptide of Type V secretion system KAB07_02002 PF13332 Hemagglutinin repeat KAB07_02003 PF08479 POTRA domain, ShlB-type KAB07_02003 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KAB07_02003 PF17287 POTRA domain KAB07_02008 PF01546 Peptidase family M20/M25/M40 KAB07_02008 PF07687 Peptidase dimerisation domain KAB07_02010 PF00999 Sodium/hydrogen exchanger family KAB07_02010 PF02254 TrkA-N domain KAB07_02011 PF07995 Glucose / Sorbosone dehydrogenase KAB07_02012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02012 PF03466 LysR substrate binding domain KAB07_02013 PF00857 Isochorismatase family KAB07_02015 PF08359 YsiA-like protein, C-terminal region KAB07_02015 PF00440 Bacterial regulatory proteins, tetR family KAB07_02016 PF12706 Beta-lactamase superfamily domain KAB07_02018 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02020 PF09278 MerR, DNA binding KAB07_02020 PF00376 MerR family regulatory protein KAB07_02021 PF01872 RibD C-terminal domain KAB07_02022 PF00106 short chain dehydrogenase KAB07_02023 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02023 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB07_02024 PF01047 MarR family KAB07_02025 PF07859 alpha/beta hydrolase fold KAB07_02028 PF00199 Catalase KAB07_02028 PF06628 Catalase-related immune-responsive KAB07_02029 PF00561 alpha/beta hydrolase fold KAB07_02031 PF00171 Aldehyde dehydrogenase family KAB07_02032 PF00107 Zinc-binding dehydrogenase KAB07_02032 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_02033 PF00474 Sodium:solute symporter family KAB07_02034 PF04341 Protein of unknown function, DUF485 KAB07_02035 PF00501 AMP-binding enzyme KAB07_02035 PF13193 AMP-binding enzyme C-terminal domain KAB07_02036 PF00158 Sigma-54 interaction domain KAB07_02036 PF02954 Bacterial regulatory protein, Fis family KAB07_02036 PF06506 Propionate catabolism activator KAB07_02038 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_02038 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_02038 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_02042 PF00171 Aldehyde dehydrogenase family KAB07_02044 PF07690 Major Facilitator Superfamily KAB07_02045 PF00920 Dehydratase family KAB07_02046 PF07729 FCD domain KAB07_02046 PF00392 Bacterial regulatory proteins, gntR family KAB07_02048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02048 PF03466 LysR substrate binding domain KAB07_02049 PF13378 Enolase C-terminal domain-like KAB07_02049 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB07_02050 PF02426 Muconolactone delta-isomerase KAB07_02051 PF00775 Dioxygenase KAB07_02051 PF04444 Catechol dioxygenase N terminus KAB07_02052 PF01144 Coenzyme A transferase KAB07_02053 PF01144 Coenzyme A transferase KAB07_02054 PF00108 Thiolase, N-terminal domain KAB07_02054 PF02803 Thiolase, C-terminal domain KAB07_02055 PF12146 Serine aminopeptidase, S33 KAB07_02056 PF01804 Penicillin amidase KAB07_02057 PF00171 Aldehyde dehydrogenase family KAB07_02059 PF01179 Copper amine oxidase, enzyme domain KAB07_02059 PF02727 Copper amine oxidase, N2 domain KAB07_02059 PF02728 Copper amine oxidase, N3 domain KAB07_02059 PF07833 Copper amine oxidase N-terminal domain KAB07_02060 PF12833 Helix-turn-helix domain KAB07_02060 PF02311 AraC-like ligand binding domain KAB07_02061 PF01613 Flavin reductase like domain KAB07_02062 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_02062 PF00175 Oxidoreductase NAD-binding domain KAB07_02065 PF00355 Rieske [2Fe-2S] domain KAB07_02065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB07_02068 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KAB07_02069 PF01425 Amidase KAB07_02071 PF07690 Major Facilitator Superfamily KAB07_02073 PF00106 short chain dehydrogenase KAB07_02076 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_02076 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_02076 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_02077 PF03466 LysR substrate binding domain KAB07_02077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02078 PF01614 Bacterial transcriptional regulator KAB07_02078 PF09339 IclR helix-turn-helix domain KAB07_02079 PF00753 Metallo-beta-lactamase superfamily KAB07_02081 PF04143 Sulphur transport KAB07_02083 PF01011 PQQ enzyme repeat KAB07_02083 PF13360 PQQ-like domain KAB07_02084 PF04966 Carbohydrate-selective porin, OprB family KAB07_02085 PF05048 Periplasmic copper-binding protein (NosD) KAB07_02086 PF01487 Type I 3-dehydroquinase KAB07_02087 PF00775 Dioxygenase KAB07_02088 PF00775 Dioxygenase KAB07_02088 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KAB07_02089 PF02627 Carboxymuconolactone decarboxylase family KAB07_02090 PF07690 Major Facilitator Superfamily KAB07_02091 PF00561 alpha/beta hydrolase fold KAB07_02092 PF00206 Lyase KAB07_02092 PF10397 Adenylosuccinate lyase C-terminus KAB07_02093 PF00108 Thiolase, N-terminal domain KAB07_02093 PF02803 Thiolase, C-terminal domain KAB07_02094 PF01144 Coenzyme A transferase KAB07_02095 PF01144 Coenzyme A transferase KAB07_02096 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAB07_02097 PF04977 Septum formation initiator KAB07_02098 PF04239 Protein of unknown function (DUF421) KAB07_02099 PF03952 Enolase, N-terminal domain KAB07_02099 PF00113 Enolase, C-terminal TIM barrel domain KAB07_02100 PF00793 DAHP synthetase I family KAB07_02101 PF06418 CTP synthase N-terminus KAB07_02101 PF00117 Glutamine amidotransferase class-I KAB07_02107 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02107 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB07_02110 PF00793 DAHP synthetase I family KAB07_02111 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KAB07_02112 PF07724 AAA domain (Cdc48 subfamily) KAB07_02112 PF17871 AAA lid domain KAB07_02112 PF00004 ATPase family associated with various cellular activities (AAA) KAB07_02112 PF02861 Clp amino terminal domain, pathogenicity island component KAB07_02112 PF10431 C-terminal, D2-small domain, of ClpB protein KAB07_02113 PF02617 ATP-dependent Clp protease adaptor protein ClpS KAB07_02115 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAB07_02115 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAB07_02118 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAB07_02119 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_02119 PF00585 C-terminal regulatory domain of Threonine dehydratase KAB07_02120 PF02254 TrkA-N domain KAB07_02120 PF02080 TrkA-C domain KAB07_02121 PF02386 Cation transport protein KAB07_02122 PF02253 Phospholipase A1 KAB07_02123 PF00675 Insulinase (Peptidase family M16) KAB07_02123 PF08367 Peptidase M16C associated KAB07_02123 PF05193 Peptidase M16 inactive domain KAB07_02124 PF07715 TonB-dependent Receptor Plug Domain KAB07_02124 PF00593 TonB dependent receptor KAB07_02125 PF00294 pfkB family carbohydrate kinase KAB07_02127 PF07290 Protein of unknown function (DUF1449) KAB07_02128 PF13737 Transposase DDE domain KAB07_02130 PF01654 Cytochrome bd terminal oxidase subunit I KAB07_02131 PF02322 Cytochrome bd terminal oxidase subunit II KAB07_02132 PF08173 Membrane bound YbgT-like protein KAB07_02135 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KAB07_02137 PF00448 SRP54-type protein, GTPase domain KAB07_02137 PF02881 SRP54-type protein, helical bundle domain KAB07_02142 PF00571 CBS domain KAB07_02142 PF00478 IMP dehydrogenase / GMP reductase domain KAB07_02143 PF00202 Aminotransferase class-III KAB07_02144 PF00462 Glutaredoxin KAB07_02146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02146 PF03466 LysR substrate binding domain KAB07_02147 PF00557 Metallopeptidase family M24 KAB07_02148 PF05525 Branched-chain amino acid transport protein KAB07_02153 PF05524 PEP-utilising enzyme, N-terminal KAB07_02153 PF00391 PEP-utilising enzyme, mobile domain KAB07_02153 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAB07_02153 PF00381 PTS HPr component phosphorylation site KAB07_02153 PF02896 PEP-utilising enzyme, TIM barrel domain KAB07_02154 PF00294 pfkB family carbohydrate kinase KAB07_02155 PF02378 Phosphotransferase system, EIIC KAB07_02155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAB07_02160 PF03707 Bacterial signalling protein N terminal repeat KAB07_02160 PF00563 EAL domain KAB07_02160 PF00990 Diguanylate cyclase, GGDEF domain KAB07_02162 PF07995 Glucose / Sorbosone dehydrogenase KAB07_02163 PF02586 SOS response associated peptidase (SRAP) KAB07_02164 PF01740 STAS domain KAB07_02164 PF00916 Sulfate permease family KAB07_02165 PF05922 Peptidase inhibitor I9 KAB07_02165 PF00082 Subtilase family KAB07_02168 PF00324 Amino acid permease KAB07_02169 PF00266 Aminotransferase class-V KAB07_02170 PF01037 Lrp/AsnC ligand binding domain KAB07_02175 PF13419 Haloacid dehalogenase-like hydrolase KAB07_02176 PF01479 S4 domain KAB07_02177 PF00154 recA bacterial DNA recombination protein KAB07_02178 PF02631 RecX family KAB07_02180 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_02180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAB07_02181 PF07977 FabA-like domain KAB07_02182 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_02182 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAB07_02184 PF07244 Surface antigen variable number repeat KAB07_02184 PF01103 Surface antigen KAB07_02185 PF13180 PDZ domain KAB07_02185 PF02163 Peptidase family M50 KAB07_02185 PF17820 PDZ domain KAB07_02186 PF13288 DXP reductoisomerase C-terminal domain KAB07_02186 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAB07_02186 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAB07_02188 PF01255 Putative undecaprenyl diphosphate synthase KAB07_02189 PF01765 Ribosome recycling factor KAB07_02190 PF00696 Amino acid kinase family KAB07_02191 PF18693 TRAM domain KAB07_02191 PF00919 Uncharacterized protein family UPF0004 KAB07_02191 PF04055 Radical SAM superfamily KAB07_02192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_02192 PF00512 His Kinase A (phospho-acceptor) domain KAB07_02192 PF00989 PAS fold KAB07_02193 PF02954 Bacterial regulatory protein, Fis family KAB07_02193 PF00158 Sigma-54 interaction domain KAB07_02193 PF00072 Response regulator receiver domain KAB07_02194 PF00440 Bacterial regulatory proteins, tetR family KAB07_02195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAB07_02195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAB07_02197 PF02542 YgbB family KAB07_02199 PF01266 FAD dependent oxidoreductase KAB07_02203 PF00206 Lyase KAB07_02203 PF10415 Fumarase C C-terminus KAB07_02204 PF16363 GDP-mannose 4,6 dehydratase KAB07_02205 PF02635 DsrE/DsrF-like family KAB07_02209 PF00892 EamA-like transporter family KAB07_02210 PF00392 Bacterial regulatory proteins, gntR family KAB07_02210 PF00155 Aminotransferase class I and II KAB07_02211 PF01638 HxlR-like helix-turn-helix KAB07_02212 PF00994 Probable molybdopterin binding domain KAB07_02212 PF03454 MoeA C-terminal region (domain IV) KAB07_02212 PF03453 MoeA N-terminal region (domain I and II) KAB07_02213 PF01967 MoaC family KAB07_02213 PF00994 Probable molybdopterin binding domain KAB07_02214 PF02391 MoaE protein KAB07_02216 PF06463 Molybdenum Cofactor Synthesis C KAB07_02216 PF04055 Radical SAM superfamily KAB07_02217 PF01568 Molydopterin dinucleotide binding domain KAB07_02217 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB07_02217 PF00384 Molybdopterin oxidoreductase KAB07_02218 PF12804 MobA-like NTP transferase domain KAB07_02219 PF04324 BFD-like [2Fe-2S] binding domain KAB07_02219 PF01568 Molydopterin dinucleotide binding domain KAB07_02219 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB07_02219 PF00384 Molybdopterin oxidoreductase KAB07_02222 PF04324 BFD-like [2Fe-2S] binding domain KAB07_02222 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAB07_02222 PF00384 Molybdopterin oxidoreductase KAB07_02222 PF01568 Molydopterin dinucleotide binding domain KAB07_02223 PF04324 BFD-like [2Fe-2S] binding domain KAB07_02223 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB07_02223 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB07_02223 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02223 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB07_02224 PF04324 BFD-like [2Fe-2S] binding domain KAB07_02224 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAB07_02224 PF13806 Rieske-like [2Fe-2S] domain KAB07_02224 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02224 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB07_02224 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB07_02226 PF00072 Response regulator receiver domain KAB07_02226 PF00486 Transcriptional regulatory protein, C terminal KAB07_02227 PF00005 ABC transporter KAB07_02228 PF00817 impB/mucB/samB family KAB07_02228 PF13438 Domain of unknown function (DUF4113) KAB07_02228 PF11799 impB/mucB/samB family C-terminal domain KAB07_02229 PF01220 Dehydroquinase class II KAB07_02230 PF00364 Biotin-requiring enzyme KAB07_02231 PF00289 Biotin carboxylase, N-terminal domain KAB07_02231 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB07_02231 PF02785 Biotin carboxylase C-terminal domain KAB07_02233 PF12832 MFS_1 like family KAB07_02237 PF01645 Conserved region in glutamate synthase KAB07_02240 PF01565 FAD binding domain KAB07_02240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAB07_02241 PF01451 Low molecular weight phosphotyrosine protein phosphatase KAB07_02243 PF00465 Iron-containing alcohol dehydrogenase KAB07_02244 PF03061 Thioesterase superfamily KAB07_02245 PF05506 Domain of unknown function (DUF756) KAB07_02245 PF04185 Phosphoesterase family KAB07_02247 PF12169 DNA polymerase III subunits gamma and tau domain III KAB07_02247 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KAB07_02247 PF12170 DNA polymerase III tau subunit V interacting with alpha KAB07_02248 PF07690 Major Facilitator Superfamily KAB07_02253 PF02803 Thiolase, C-terminal domain KAB07_02253 PF00108 Thiolase, N-terminal domain KAB07_02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02255 PF03466 LysR substrate binding domain KAB07_02257 PF01810 LysE type translocator KAB07_02258 PF01037 Lrp/AsnC ligand binding domain KAB07_02259 PF03594 Benzoate membrane transport protein KAB07_02260 PF02308 MgtC family KAB07_02261 PF00689 Cation transporting ATPase, C-terminus KAB07_02261 PF00690 Cation transporter/ATPase, N-terminus KAB07_02266 PF00582 Universal stress protein family KAB07_02267 PF00005 ABC transporter KAB07_02267 PF12848 ABC transporter KAB07_02271 PF00593 TonB dependent receptor KAB07_02271 PF07715 TonB-dependent Receptor Plug Domain KAB07_02279 PF00924 Mechanosensitive ion channel KAB07_02280 PF07715 TonB-dependent Receptor Plug Domain KAB07_02280 PF00593 TonB dependent receptor KAB07_02281 PF00440 Bacterial regulatory proteins, tetR family KAB07_02283 PF01037 Lrp/AsnC ligand binding domain KAB07_02284 PF01817 Chorismate mutase type II KAB07_02286 PF00106 short chain dehydrogenase KAB07_02288 PF01433 Peptidase family M1 domain KAB07_02288 PF11940 Domain of unknown function (DUF3458) Ig-like fold KAB07_02288 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KAB07_02291 PF02110 Hydroxyethylthiazole kinase family KAB07_02292 PF06445 GyrI-like small molecule binding domain KAB07_02294 PF05970 PIF1-like helicase KAB07_02294 PF14493 Helix-turn-helix domain KAB07_02295 PF00465 Iron-containing alcohol dehydrogenase KAB07_02298 PF00171 Aldehyde dehydrogenase family KAB07_02299 PF13520 Amino acid permease KAB07_02300 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KAB07_02301 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KAB07_02302 PF02540 NAD synthase KAB07_02302 PF00117 Glutamine amidotransferase class-I KAB07_02302 PF00958 GMP synthase C terminal domain KAB07_02303 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB07_02303 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAB07_02304 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAB07_02305 PF00149 Calcineurin-like phosphoesterase KAB07_02307 PF00881 Nitroreductase family KAB07_02309 PF17209 Hfq protein KAB07_02311 PF08676 MutL C terminal dimerisation domain KAB07_02311 PF01119 DNA mismatch repair protein, C-terminal domain KAB07_02312 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAB07_02313 PF00849 RNA pseudouridylate synthase KAB07_02313 PF01479 S4 domain KAB07_02316 PF01479 S4 domain KAB07_02316 PF00849 RNA pseudouridylate synthase KAB07_02318 PF04284 Protein of unknown function (DUF441) KAB07_02319 PF03466 LysR substrate binding domain KAB07_02319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02322 PF07690 Major Facilitator Superfamily KAB07_02323 PF00027 Cyclic nucleotide-binding domain KAB07_02323 PF00520 Ion transport protein KAB07_02325 PF00330 Aconitase family (aconitate hydratase) KAB07_02325 PF06434 Aconitate hydratase 2 N-terminus KAB07_02325 PF11791 Aconitate B N-terminal domain KAB07_02328 PF17243 POTRA domain TamA domain 1 KAB07_02328 PF07244 Surface antigen variable number repeat KAB07_02328 PF01103 Surface antigen KAB07_02329 PF07690 Major Facilitator Superfamily KAB07_02330 PF03232 Ubiquinone biosynthesis protein COQ7 KAB07_02332 PF00120 Glutamine synthetase, catalytic domain KAB07_02333 PF00072 Response regulator receiver domain KAB07_02333 PF00486 Transcriptional regulatory protein, C terminal KAB07_02334 PF13493 Domain of unknown function (DUF4118) KAB07_02334 PF02702 Osmosensitive K+ channel His kinase sensor domain KAB07_02334 PF00512 His Kinase A (phospho-acceptor) domain KAB07_02334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_02335 PF02669 K+-transporting ATPase, c chain KAB07_02337 PF03814 Potassium-transporting ATPase A subunit KAB07_02340 PF03109 ABC1 family KAB07_02341 PF00899 ThiF family KAB07_02342 PF01613 Flavin reductase like domain KAB07_02343 PF13193 AMP-binding enzyme C-terminal domain KAB07_02343 PF00501 AMP-binding enzyme KAB07_02344 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_02344 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_02344 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_02345 PF00106 short chain dehydrogenase KAB07_02346 PF12833 Helix-turn-helix domain KAB07_02347 PF09084 NMT1/THI5 like KAB07_02348 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02349 PF13847 Methyltransferase domain KAB07_02349 PF17827 PrmC N-terminal domain KAB07_02350 PF00472 RF-1 domain KAB07_02350 PF03462 PCRF domain KAB07_02352 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02352 PF03466 LysR substrate binding domain KAB07_02355 PF00296 Luciferase-like monooxygenase KAB07_02358 PF00535 Glycosyl transferase family 2 KAB07_02359 PF14883 Hypothetical glycosyl hydrolase family 13 KAB07_02359 PF01522 Polysaccharide deacetylase KAB07_02361 PF03618 Kinase/pyrophosphorylase KAB07_02362 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAB07_02362 PF02896 PEP-utilising enzyme, TIM barrel domain KAB07_02362 PF00391 PEP-utilising enzyme, mobile domain KAB07_02364 PF06481 COX Aromatic Rich Motif KAB07_02364 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAB07_02365 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAB07_02366 PF00510 Cytochrome c oxidase subunit III KAB07_02367 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KAB07_02368 PF01040 UbiA prenyltransferase family KAB07_02369 PF01250 Ribosomal protein S6 KAB07_02370 PF01084 Ribosomal protein S18 KAB07_02371 PF03948 Ribosomal protein L9, C-terminal domain KAB07_02371 PF01281 Ribosomal protein L9, N-terminal domain KAB07_02372 PF03796 DnaB-like helicase C terminal domain KAB07_02372 PF00772 DnaB-like helicase N terminal domain KAB07_02373 PF01168 Alanine racemase, N-terminal domain KAB07_02373 PF00842 Alanine racemase, C-terminal domain KAB07_02375 PF08379 Bacterial transglutaminase-like N-terminal region KAB07_02375 PF01841 Transglutaminase-like superfamily KAB07_02377 PF14403 Circularly permuted ATP-grasp type 2 KAB07_02379 PF13932 GidA associated domain KAB07_02379 PF01134 Glucose inhibited division protein A KAB07_02383 PF02954 Bacterial regulatory protein, Fis family KAB07_02384 PF02142 MGS-like domain KAB07_02384 PF01808 AICARFT/IMPCHase bienzyme KAB07_02385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAB07_02385 PF02844 Phosphoribosylglycinamide synthetase, N domain KAB07_02385 PF02843 Phosphoribosylglycinamide synthetase, C domain KAB07_02386 PF03180 NLPA lipoprotein KAB07_02387 PF09383 NIL domain KAB07_02387 PF00005 ABC transporter KAB07_02388 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02389 PF00753 Metallo-beta-lactamase superfamily KAB07_02389 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAB07_02391 PF00375 Sodium:dicarboxylate symporter family KAB07_02392 PF13610 DDE domain KAB07_02395 PF00375 Sodium:dicarboxylate symporter family KAB07_02396 PF13610 DDE domain KAB07_02397 PF01051 Initiator Replication protein KAB07_02401 PF13005 zinc-finger binding domain of transposase IS66 KAB07_02401 PF13007 Transposase C of IS166 homeodomain KAB07_02401 PF03050 Transposase IS66 family KAB07_02401 PF13817 IS66 C-terminal element KAB07_02403 PF01636 Phosphotransferase enzyme family KAB07_02407 PF07091 Ribosomal RNA methyltransferase (FmrO) KAB07_02408 PF13737 Transposase DDE domain KAB07_02410 PF00809 Pterin binding enzyme KAB07_02411 PF00893 Small Multidrug Resistance protein KAB07_02412 PF13427 Domain of unknown function (DUF4111) KAB07_02412 PF01909 Nucleotidyltransferase domain KAB07_02413 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_02415 PF00589 Phage integrase family KAB07_02415 PF13495 Phage integrase, N-terminal SAM-like domain KAB07_02416 PF13610 DDE domain KAB07_02418 PF07995 Glucose / Sorbosone dehydrogenase KAB07_02419 PF00892 EamA-like transporter family KAB07_02420 PF01177 Asp/Glu/Hydantoin racemase KAB07_02422 PF02470 MlaD protein KAB07_02423 PF04403 Paraquat-inducible protein A KAB07_02425 PF06826 Predicted Permease Membrane Region KAB07_02425 PF02080 TrkA-C domain KAB07_02426 PF00155 Aminotransferase class I and II KAB07_02429 PF00083 Sugar (and other) transporter KAB07_02429 PF08946 Osmosensory transporter coiled coil KAB07_02439 PF07729 FCD domain KAB07_02439 PF00392 Bacterial regulatory proteins, gntR family KAB07_02441 PF03616 Sodium/glutamate symporter KAB07_02442 PF00561 alpha/beta hydrolase fold KAB07_02447 PF04076 Bacterial OB fold (BOF) protein KAB07_02453 PF00324 Amino acid permease KAB07_02454 PF00171 Aldehyde dehydrogenase family KAB07_02455 PF00202 Aminotransferase class-III KAB07_02456 PF03466 LysR substrate binding domain KAB07_02456 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02461 PF00069 Protein kinase domain KAB07_02465 PF00814 Glycoprotease family KAB07_02466 PF01165 Ribosomal protein S21 KAB07_02467 PF09424 Yqey-like protein KAB07_02468 PF01435 Peptidase family M48 KAB07_02469 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB07_02469 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB07_02472 PF00156 Phosphoribosyl transferase domain KAB07_02474 PF01180 Dihydroorotate dehydrogenase KAB07_02478 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAB07_02478 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAB07_02479 PF00881 Nitroreductase family KAB07_02481 PF00271 Helicase conserved C-terminal domain KAB07_02481 PF00270 DEAD/DEAH box helicase KAB07_02482 PF00313 'Cold-shock' DNA-binding domain KAB07_02484 PF04545 Sigma-70, region 4 KAB07_02484 PF04542 Sigma-70 region 2 KAB07_02484 PF00140 Sigma-70 factor, region 1.2 KAB07_02485 PF04241 Protein of unknown function (DUF423) KAB07_02487 PF05690 Thiazole biosynthesis protein ThiG KAB07_02489 PF03883 Peroxide stress protein YaaA KAB07_02491 PF12706 Beta-lactamase superfamily domain KAB07_02492 PF01546 Peptidase family M20/M25/M40 KAB07_02492 PF07687 Peptidase dimerisation domain KAB07_02494 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAB07_02495 PF01842 ACT domain KAB07_02495 PF01817 Chorismate mutase type II KAB07_02495 PF00800 Prephenate dehydratase KAB07_02496 PF00756 Putative esterase KAB07_02497 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_02497 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_02497 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_02498 PF00375 Sodium:dicarboxylate symporter family KAB07_02499 PF00591 Glycosyl transferase family, a/b domain KAB07_02499 PF02885 Glycosyl transferase family, helical bundle domain KAB07_02500 PF07023 Protein of unknown function (DUF1315) KAB07_02501 PF01513 ATP-NAD kinase KAB07_02502 PF14814 Bifunctional transglycosylase second domain KAB07_02502 PF00905 Penicillin binding protein transpeptidase domain KAB07_02502 PF00912 Transglycosylase KAB07_02504 PF00293 NUDIX domain KAB07_02506 PF08521 Two-component sensor kinase N-terminal KAB07_02506 PF00512 His Kinase A (phospho-acceptor) domain KAB07_02506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_02507 PF00072 Response regulator receiver domain KAB07_02507 PF00486 Transcriptional regulatory protein, C terminal KAB07_02509 PF00437 Type II/IV secretion system protein KAB07_02511 PF01980 tRNA-methyltransferase O KAB07_02511 PF18389 TrmO C-terminal domain KAB07_02512 PF00175 Oxidoreductase NAD-binding domain KAB07_02512 PF00970 Oxidoreductase FAD-binding domain KAB07_02513 PF02567 Phenazine biosynthesis-like protein KAB07_02514 PF00392 Bacterial regulatory proteins, gntR family KAB07_02514 PF00155 Aminotransferase class I and II KAB07_02516 PF00037 4Fe-4S binding domain KAB07_02517 PF00893 Small Multidrug Resistance protein KAB07_02518 PF00005 ABC transporter KAB07_02519 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02520 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02521 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB07_02522 PF03466 LysR substrate binding domain KAB07_02522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02523 PF13533 Biotin-lipoyl like KAB07_02524 PF00873 AcrB/AcrD/AcrF family KAB07_02525 PF02321 Outer membrane efflux protein KAB07_02526 PF00464 Serine hydroxymethyltransferase KAB07_02532 PF00005 ABC transporter KAB07_02533 PF01061 ABC-2 type transporter KAB07_02534 PF14489 QueF-like protein KAB07_02534 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KAB07_02536 PF01098 Cell cycle protein KAB07_02537 PF13406 Transglycosylase SLT domain KAB07_02538 PF05036 Sporulation related domain KAB07_02538 PF03330 Lytic transglycolase KAB07_02542 PF12833 Helix-turn-helix domain KAB07_02544 PF00889 Elongation factor TS KAB07_02545 PF00318 Ribosomal protein S2 KAB07_02546 PF00557 Metallopeptidase family M24 KAB07_02548 PF07690 Major Facilitator Superfamily KAB07_02551 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB07_02551 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02552 PF04055 Radical SAM superfamily KAB07_02553 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_02553 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_02553 PF09317 Domain of unknown function (DUF1974) KAB07_02556 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAB07_02556 PF05221 S-adenosyl-L-homocysteine hydrolase KAB07_02557 PF02219 Methylenetetrahydrofolate reductase KAB07_02558 PF04452 RNA methyltransferase KAB07_02559 PF03707 Bacterial signalling protein N terminal repeat KAB07_02559 PF00563 EAL domain KAB07_02559 PF00990 Diguanylate cyclase, GGDEF domain KAB07_02560 PF00390 Malic enzyme, N-terminal domain KAB07_02560 PF01515 Phosphate acetyl/butaryl transferase KAB07_02560 PF03949 Malic enzyme, NAD binding domain KAB07_02561 PF01743 Poly A polymerase head domain KAB07_02561 PF12627 Probable RNA and SrmB- binding site of polymerase A KAB07_02562 PF13180 PDZ domain KAB07_02563 PF01784 NIF3 (NGG1p interacting factor 3) KAB07_02564 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAB07_02564 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAB07_02571 PF01040 UbiA prenyltransferase family KAB07_02572 PF04345 Chorismate lyase KAB07_02574 PF00854 POT family KAB07_02576 PF13356 Arm DNA-binding domain KAB07_02576 PF00589 Phage integrase family KAB07_02643 PF12161 HsdM N-terminal domain KAB07_02643 PF02384 N-6 DNA Methylase KAB07_02666 PF08525 Opacity-associated protein A N-terminal motif KAB07_02666 PF01476 LysM domain KAB07_02666 PF01551 Peptidase family M23 KAB07_02709 PF01555 DNA methylase KAB07_02715 PF01555 DNA methylase KAB07_02733 PF00117 Glutamine amidotransferase class-I KAB07_02734 PF01433 Peptidase family M1 domain KAB07_02734 PF11838 ERAP1-like C-terminal domain KAB07_02735 PF00593 TonB dependent receptor KAB07_02735 PF07715 TonB-dependent Receptor Plug Domain KAB07_02736 PF00591 Glycosyl transferase family, a/b domain KAB07_02736 PF02885 Glycosyl transferase family, helical bundle domain KAB07_02737 PF00218 Indole-3-glycerol phosphate synthase KAB07_02740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KAB07_02740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KAB07_02741 PF01799 [2Fe-2S] binding domain KAB07_02741 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_02745 PF00144 Beta-lactamase KAB07_02748 PF05675 Protein of unknown function (DUF817) KAB07_02749 PF01208 Uroporphyrinogen decarboxylase (URO-D) KAB07_02751 PF00425 chorismate binding enzyme KAB07_02753 PF00975 Thioesterase domain KAB07_02754 PF00005 ABC transporter KAB07_02754 PF00664 ABC transporter transmembrane region KAB07_02755 PF00664 ABC transporter transmembrane region KAB07_02755 PF00005 ABC transporter KAB07_02757 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB07_02758 PF00550 Phosphopantetheine attachment site KAB07_02758 PF00857 Isochorismatase family KAB07_02759 PF00501 AMP-binding enzyme KAB07_02759 PF13193 AMP-binding enzyme C-terminal domain KAB07_02760 PF00550 Phosphopantetheine attachment site KAB07_02760 PF00668 Condensation domain KAB07_02760 PF00501 AMP-binding enzyme KAB07_02761 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KAB07_02762 PF00593 TonB dependent receptor KAB07_02762 PF07715 TonB-dependent Receptor Plug Domain KAB07_02763 PF01497 Periplasmic binding protein KAB07_02764 PF00005 ABC transporter KAB07_02765 PF01032 FecCD transport family KAB07_02766 PF01032 FecCD transport family KAB07_02769 PF13193 AMP-binding enzyme C-terminal domain KAB07_02769 PF00668 Condensation domain KAB07_02769 PF00501 AMP-binding enzyme KAB07_02769 PF00975 Thioesterase domain KAB07_02769 PF00550 Phosphopantetheine attachment site KAB07_02770 PF00550 Phosphopantetheine attachment site KAB07_02770 PF00668 Condensation domain KAB07_02770 PF13193 AMP-binding enzyme C-terminal domain KAB07_02770 PF00501 AMP-binding enzyme KAB07_02772 PF13309 HTH domain KAB07_02772 PF08348 YheO-like PAS domain KAB07_02773 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_02774 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_02775 PF02678 Pirin KAB07_02775 PF17954 Quercetinase C-terminal cupin domain KAB07_02778 PF00440 Bacterial regulatory proteins, tetR family KAB07_02779 PF08990 Erythronolide synthase docking KAB07_02779 PF16197 Ketoacyl-synthetase C-terminal extension KAB07_02779 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_02779 PF00698 Acyl transferase domain KAB07_02779 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_02779 PF08659 KR domain KAB07_02779 PF00550 Phosphopantetheine attachment site KAB07_02779 PF14765 Polyketide synthase dehydratase KAB07_02779 PF09277 Erythronolide synthase, docking KAB07_02779 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_02780 PF13378 Enolase C-terminal domain-like KAB07_02780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KAB07_02781 PF00083 Sugar (and other) transporter KAB07_02782 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KAB07_02784 PF00892 EamA-like transporter family KAB07_02788 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB07_02788 PF01266 FAD dependent oxidoreductase KAB07_02789 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02789 PF18113 Rubredoxin binding C-terminal domain KAB07_02791 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KAB07_02791 PF00355 Rieske [2Fe-2S] domain KAB07_02792 PF02028 BCCT, betaine/carnitine/choline family transporter KAB07_02793 PF02028 BCCT, betaine/carnitine/choline family transporter KAB07_02794 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02794 PF03466 LysR substrate binding domain KAB07_02795 PF00324 Amino acid permease KAB07_02796 PF00171 Aldehyde dehydrogenase family KAB07_02799 PF13556 PucR C-terminal helix-turn-helix domain KAB07_02799 PF17853 GGDEF-like domain KAB07_02799 PF06018 CodY GAF-like domain KAB07_02806 PF04328 Selenoprotein, putative KAB07_02807 PF13722 5TM C-terminal transporter carbon starvation CstA KAB07_02807 PF02554 Carbon starvation protein CstA KAB07_02808 PF08207 Elongation factor P (EF-P) KOW-like domain KAB07_02808 PF09285 Elongation factor P, C-terminal KAB07_02808 PF01132 Elongation factor P (EF-P) OB domain KAB07_02809 PF04055 Radical SAM superfamily KAB07_02812 PF01197 Ribosomal protein L31 KAB07_02813 PF13593 SBF-like CPA transporter family (DUF4137) KAB07_02814 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB07_02815 PF07690 Major Facilitator Superfamily KAB07_02816 PF13654 AAA domain KAB07_02816 PF05362 Lon protease (S16) C-terminal proteolytic domain KAB07_02817 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02817 PF03466 LysR substrate binding domain KAB07_02818 PF01476 LysM domain KAB07_02818 PF01551 Peptidase family M23 KAB07_02819 PF01975 Survival protein SurE KAB07_02822 PF07943 Penicillin-binding protein 5, C-terminal domain KAB07_02822 PF00768 D-alanyl-D-alanine carboxypeptidase KAB07_02823 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_02824 PF00293 NUDIX domain KAB07_02824 PF13344 Haloacid dehalogenase-like hydrolase KAB07_02826 PF04356 Protein of unknown function (DUF489) KAB07_02827 PF08328 Adenylosuccinate lyase C-terminal KAB07_02827 PF00206 Lyase KAB07_02830 PF01343 Peptidase family S49 KAB07_02830 PF08496 Peptidase family S49 N-terminal KAB07_02831 PF00005 ABC transporter KAB07_02832 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02833 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02834 PF12849 PBP superfamily domain KAB07_02835 PF00324 Amino acid permease KAB07_02836 PF00205 Thiamine pyrophosphate enzyme, central domain KAB07_02836 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAB07_02836 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAB07_02837 PF01037 Lrp/AsnC ligand binding domain KAB07_02838 PF00171 Aldehyde dehydrogenase family KAB07_02839 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAB07_02840 PF00202 Aminotransferase class-III KAB07_02842 PF00440 Bacterial regulatory proteins, tetR family KAB07_02842 PF17754 MftR C-terminal domain KAB07_02844 PF00487 Fatty acid desaturase KAB07_02845 PF00111 2Fe-2S iron-sulfur cluster binding domain KAB07_02845 PF00175 Oxidoreductase NAD-binding domain KAB07_02845 PF00970 Oxidoreductase FAD-binding domain KAB07_02846 PF00440 Bacterial regulatory proteins, tetR family KAB07_02851 PF12137 RNA polymerase recycling family C-terminal KAB07_02851 PF00176 SNF2 family N-terminal domain KAB07_02851 PF00271 Helicase conserved C-terminal domain KAB07_02851 PF18339 RapA N-terminal Tudor like domain 1 KAB07_02851 PF18337 RapA N-terminal Tudor like domain KAB07_02852 PF00849 RNA pseudouridylate synthase KAB07_02854 PF00202 Aminotransferase class-III KAB07_02855 PF02581 Thiamine monophosphate synthase KAB07_02860 PF00675 Insulinase (Peptidase family M16) KAB07_02860 PF05193 Peptidase M16 inactive domain KAB07_02861 PF02567 Phenazine biosynthesis-like protein KAB07_02863 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02863 PF03466 LysR substrate binding domain KAB07_02864 PF06779 Uncharacterised MFS-type transporter YbfB KAB07_02867 PF00180 Isocitrate/isopropylmalate dehydrogenase KAB07_02868 PF00849 RNA pseudouridylate synthase KAB07_02869 PF03971 Monomeric isocitrate dehydrogenase KAB07_02871 PF00768 D-alanyl-D-alanine carboxypeptidase KAB07_02871 PF07943 Penicillin-binding protein 5, C-terminal domain KAB07_02872 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_02873 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAB07_02874 PF03441 FAD binding domain of DNA photolyase KAB07_02874 PF00875 DNA photolyase KAB07_02880 PF02350 UDP-N-acetylglucosamine 2-epimerase KAB07_02883 PF03060 Nitronate monooxygenase KAB07_02884 PF01207 Dihydrouridine synthase (Dus) KAB07_02885 PF07759 Protein of unknown function (DUF1615) KAB07_02887 PF01472 PUA domain KAB07_02887 PF00696 Amino acid kinase family KAB07_02888 PF01018 GTP1/OBG KAB07_02888 PF01926 50S ribosome-binding GTPase KAB07_02891 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAB07_02891 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAB07_02893 PF00892 EamA-like transporter family KAB07_02895 PF02151 UvrB/uvrC motif KAB07_02895 PF12344 Ultra-violet resistance protein B KAB07_02895 PF17757 UvrB interaction domain KAB07_02895 PF00271 Helicase conserved C-terminal domain KAB07_02895 PF04851 Type III restriction enzyme, res subunit KAB07_02897 PF00990 Diguanylate cyclase, GGDEF domain KAB07_02897 PF17151 Periplasmic sensor domain KAB07_02904 PF00106 short chain dehydrogenase KAB07_02905 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KAB07_02906 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KAB07_02907 PF11967 Recombination protein O N terminal KAB07_02907 PF02565 Recombination protein O C terminal KAB07_02909 PF07650 KH domain KAB07_02909 PF01926 50S ribosome-binding GTPase KAB07_02910 PF14622 Ribonuclease-III-like KAB07_02910 PF00035 Double-stranded RNA binding motif KAB07_02912 PF10502 Signal peptidase, peptidase S26 KAB07_02913 PF03144 Elongation factor Tu domain 2 KAB07_02913 PF00009 Elongation factor Tu GTP binding domain KAB07_02913 PF00679 Elongation factor G C-terminus KAB07_02913 PF06421 GTP-binding protein LepA C-terminus KAB07_02915 PF13180 PDZ domain KAB07_02916 PF02910 Fumarate reductase flavoprotein C-term KAB07_02916 PF00890 FAD binding domain KAB07_02918 PF02223 Thymidylate kinase KAB07_02919 PF02618 YceG-like family KAB07_02920 PF01063 Amino-transferase class IV KAB07_02923 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02924 PF00528 Binding-protein-dependent transport system inner membrane component KAB07_02925 PF00005 ABC transporter KAB07_02925 PF12857 TOBE-like domain KAB07_02926 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_02926 PF03466 LysR substrate binding domain KAB07_02928 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_02928 PF14602 Hexapeptide repeat of succinyl-transferase KAB07_02928 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KAB07_02930 PF06508 Queuosine biosynthesis protein QueC KAB07_02934 PF00578 AhpC/TSA family KAB07_02936 PF00293 NUDIX domain KAB07_02936 PF01467 Cytidylyltransferase-like KAB07_02937 PF00378 Enoyl-CoA hydratase/isomerase KAB07_02938 PF01784 NIF3 (NGG1p interacting factor 3) KAB07_02940 PF07690 Major Facilitator Superfamily KAB07_02941 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KAB07_02941 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAB07_02941 PF02769 AIR synthase related protein, C-terminal domain KAB07_02942 PF01966 HD domain KAB07_02943 PF07499 RuvA, C-terminal domain KAB07_02943 PF01330 RuvA N terminal domain KAB07_02944 PF17864 RuvB AAA lid domain KAB07_02944 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAB07_02944 PF05491 RuvB C-terminal winged helix domain KAB07_02945 PF01546 Peptidase family M20/M25/M40 KAB07_02945 PF07687 Peptidase dimerisation domain KAB07_02946 PF03061 Thioesterase superfamily KAB07_02947 PF01618 MotA/TolQ/ExbB proton channel family KAB07_02948 PF02472 Biopolymer transport protein ExbD/TolR KAB07_02950 PF04052 TolB amino-terminal domain KAB07_02950 PF07676 WD40-like Beta Propeller Repeat KAB07_02951 PF00691 OmpA family KAB07_02953 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KAB07_02954 PF00588 SpoU rRNA Methylase family KAB07_02954 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAB07_02963 PF00308 Bacterial dnaA protein KAB07_02963 PF08299 Bacterial dnaA protein helix-turn-helix KAB07_02963 PF11638 DnaA N-terminal domain KAB07_02964 PF01594 AI-2E family transporter KAB07_02965 PF00586 AIR synthase related protein, N-terminal domain KAB07_02965 PF02769 AIR synthase related protein, C-terminal domain KAB07_02966 PF00551 Formyl transferase KAB07_02967 PF12697 Alpha/beta hydrolase family KAB07_02968 PF06965 Na+/H+ antiporter 1 KAB07_02968 PF01343 Peptidase family S49 KAB07_02970 PF00753 Metallo-beta-lactamase superfamily KAB07_02970 PF13567 Domain of unknown function (DUF4131) KAB07_02970 PF03772 Competence protein KAB07_02971 PF00005 ABC transporter KAB07_02972 PF02687 FtsX-like permease family KAB07_02972 PF12704 MacB-like periplasmic core domain KAB07_02974 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KAB07_02977 PF00266 Aminotransferase class-V KAB07_02979 PF13533 Biotin-lipoyl like KAB07_02983 PF00535 Glycosyl transferase family 2 KAB07_02986 PF00521 DNA gyrase/topoisomerase IV, subunit A KAB07_02986 PF03989 DNA gyrase C-terminal domain, beta-propeller KAB07_02987 PF00766 Electron transfer flavoprotein FAD-binding domain KAB07_02987 PF01012 Electron transfer flavoprotein domain KAB07_02988 PF01012 Electron transfer flavoprotein domain KAB07_02989 PF00589 Phage integrase family KAB07_02989 PF02899 Phage integrase, N-terminal SAM-like domain KAB07_02990 PF01810 LysE type translocator KAB07_02991 PF01678 Diaminopimelate epimerase KAB07_02992 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAB07_02992 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAB07_02994 PF00324 Amino acid permease KAB07_02995 PF18073 Rubredoxin metal binding domain KAB07_02997 PF00152 tRNA synthetases class II (D, K and N) KAB07_02998 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB07_02998 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB07_02998 PF11890 Domain of unknown function (DUF3410) KAB07_02999 PF06803 Protein of unknown function (DUF1232) KAB07_03000 PF02634 FdhD/NarQ family KAB07_03001 PF00384 Molybdopterin oxidoreductase KAB07_03002 PF02595 Glycerate kinase family KAB07_03005 PF00881 Nitroreductase family KAB07_03024 PF10124 Mu-like prophage major head subunit gpT KAB07_03027 PF05069 Phage virion morphogenesis family KAB07_03028 PF04233 Phage Mu protein F like protein KAB07_03029 PF06074 Protein of unknown function (DUF935) KAB07_03032 PF03237 Terminase-like family KAB07_03039 PF10502 Signal peptidase, peptidase S26 KAB07_03045 PF13401 AAA domain KAB07_03045 PF01471 Putative peptidoglycan binding domain KAB07_03051 PF00216 Bacterial DNA-binding protein KAB07_03059 PF13193 AMP-binding enzyme C-terminal domain KAB07_03059 PF00668 Condensation domain KAB07_03059 PF00501 AMP-binding enzyme KAB07_03059 PF00550 Phosphopantetheine attachment site KAB07_03059 PF00975 Thioesterase domain KAB07_03062 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB07_03062 PF03449 Transcription elongation factor, N-terminal KAB07_03063 PF01464 Transglycosylase SLT domain KAB07_03063 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAB07_03065 PF01171 PP-loop family KAB07_03066 PF01464 Transglycosylase SLT domain KAB07_03067 PF01435 Peptidase family M48 KAB07_03069 PF00873 AcrB/AcrD/AcrF family KAB07_03070 PF03009 Glycerophosphoryl diester phosphodiesterase family KAB07_03072 PF01219 Prokaryotic diacylglycerol kinase KAB07_03073 PF00118 TCP-1/cpn60 chaperonin family KAB07_03074 PF00166 Chaperonin 10 Kd subunit KAB07_03076 PF00149 Calcineurin-like phosphoesterase KAB07_03077 PF00781 Diacylglycerol kinase catalytic domain KAB07_03078 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KAB07_03078 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KAB07_03079 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAB07_03079 PF01266 FAD dependent oxidoreductase KAB07_03080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAB07_03080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAB07_03081 PF00083 Sugar (and other) transporter KAB07_03084 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAB07_03084 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAB07_03087 PF16655 PhoD-like phosphatase, N-terminal domain KAB07_03087 PF09423 PhoD-like phosphatase KAB07_03091 PF00809 Pterin binding enzyme KAB07_03092 PF17862 AAA+ lid domain KAB07_03092 PF00004 ATPase family associated with various cellular activities (AAA) KAB07_03092 PF06480 FtsH Extracellular KAB07_03092 PF01434 Peptidase family M41 KAB07_03093 PF01728 FtsJ-like methyltransferase KAB07_03094 PF01985 CRS1 / YhbY (CRM) domain KAB07_03097 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAB07_03097 PF00117 Glutamine amidotransferase class-I KAB07_03098 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB07_03098 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAB07_03098 PF02142 MGS-like domain KAB07_03099 PF01272 Transcription elongation factor, GreA/GreB, C-term KAB07_03099 PF03449 Transcription elongation factor, N-terminal KAB07_03100 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_03101 PF00582 Universal stress protein family KAB07_03102 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAB07_03104 PF09587 Bacterial capsule synthesis protein PGA_cap KAB07_03108 PF00999 Sodium/hydrogen exchanger family KAB07_03109 PF04228 Putative neutral zinc metallopeptidase KAB07_03110 PF05661 Protein of unknown function (DUF808) KAB07_03111 PF00579 tRNA synthetases class I (W and Y) KAB07_03112 PF02629 CoA binding domain KAB07_03112 PF00549 CoA-ligase KAB07_03113 PF00549 CoA-ligase KAB07_03113 PF08442 ATP-grasp domain KAB07_03114 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_03114 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB07_03115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB07_03115 PF00364 Biotin-requiring enzyme KAB07_03115 PF02817 e3 binding domain KAB07_03116 PF16870 2-oxoglutarate dehydrogenase C-terminal KAB07_03116 PF16078 2-oxoglutarate dehydrogenase N-terminus KAB07_03116 PF02779 Transketolase, pyrimidine binding domain KAB07_03116 PF00676 Dehydrogenase E1 component KAB07_03117 PF13085 2Fe-2S iron-sulfur cluster binding domain KAB07_03118 PF00890 FAD binding domain KAB07_03118 PF02910 Fumarate reductase flavoprotein C-term KAB07_03119 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB07_03120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAB07_03121 PF00285 Citrate synthase, C-terminal domain KAB07_03127 PF03979 Sigma-70 factor, region 1.1 KAB07_03127 PF04545 Sigma-70, region 4 KAB07_03127 PF04542 Sigma-70 region 2 KAB07_03127 PF00140 Sigma-70 factor, region 1.2 KAB07_03127 PF04539 Sigma-70 region 3 KAB07_03127 PF04546 Sigma-70, non-essential region KAB07_03128 PF04359 Protein of unknown function (DUF493) KAB07_03129 PF03099 Biotin/lipoate A/B protein ligase family KAB07_03131 PF00465 Iron-containing alcohol dehydrogenase KAB07_03132 PF13520 Amino acid permease KAB07_03133 PF03358 NADPH-dependent FMN reductase KAB07_03134 PF01638 HxlR-like helix-turn-helix KAB07_03135 PF00588 SpoU rRNA Methylase family KAB07_03136 PF14824 Sirohaem biosynthesis protein central KAB07_03136 PF10414 Sirohaem synthase dimerisation region KAB07_03136 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAB07_03137 PF02403 Seryl-tRNA synthetase N-terminal domain KAB07_03137 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB07_03139 PF03548 Outer membrane lipoprotein carrier protein LolA KAB07_03140 PF01016 Ribosomal L27 protein KAB07_03141 PF00829 Ribosomal prokaryotic L21 protein KAB07_03142 PF00348 Polyprenyl synthetase KAB07_03144 PF01569 PAP2 superfamily KAB07_03145 PF00529 HlyD membrane-fusion protein of T1SS KAB07_03145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_03146 PF00873 AcrB/AcrD/AcrF family KAB07_03147 PF02321 Outer membrane efflux protein KAB07_03148 PF01906 Putative heavy-metal-binding KAB07_03149 PF01906 Putative heavy-metal-binding KAB07_03153 PF00133 tRNA synthetases class I (I, L, M and V) KAB07_03153 PF10458 Valyl tRNA synthetase tRNA binding arm KAB07_03153 PF08264 Anticodon-binding domain of tRNA KAB07_03158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03158 PF03466 LysR substrate binding domain KAB07_03159 PF00909 Ammonium Transporter Family KAB07_03161 PF00512 His Kinase A (phospho-acceptor) domain KAB07_03161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03161 PF08521 Two-component sensor kinase N-terminal KAB07_03162 PF00486 Transcriptional regulatory protein, C terminal KAB07_03162 PF00072 Response regulator receiver domain KAB07_03163 PF00884 Sulfatase KAB07_03163 PF08019 Phosphoethanolamine transferase EptA/EptB KAB07_03167 PF01734 Patatin-like phospholipase KAB07_03169 PF01145 SPFH domain / Band 7 family KAB07_03170 PF04237 YjbR KAB07_03171 PF00348 Polyprenyl synthetase KAB07_03172 PF04303 PrpF protein KAB07_03173 PF00324 Amino acid permease KAB07_03175 PF01965 DJ-1/PfpI family KAB07_03176 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_03176 PF08990 Erythronolide synthase docking KAB07_03176 PF02801 Beta-ketoacyl synthase, C-terminal domain KAB07_03176 PF16197 Ketoacyl-synthetase C-terminal extension KAB07_03176 PF00109 Beta-ketoacyl synthase, N-terminal domain KAB07_03176 PF08659 KR domain KAB07_03176 PF00550 Phosphopantetheine attachment site KAB07_03176 PF09277 Erythronolide synthase, docking KAB07_03176 PF00698 Acyl transferase domain KAB07_03176 PF14765 Polyketide synthase dehydratase KAB07_03177 PF12833 Helix-turn-helix domain KAB07_03177 PF06719 AraC-type transcriptional regulator N-terminus KAB07_03178 PF02673 Bacitracin resistance protein BacA KAB07_03182 PF02525 Flavodoxin-like fold KAB07_03185 PF01507 Phosphoadenosine phosphosulfate reductase family KAB07_03186 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KAB07_03186 PF06974 Protein of unknown function (DUF1298) KAB07_03188 PF10150 Ribonuclease E/G family KAB07_03188 PF00575 S1 RNA binding domain KAB07_03189 PF02545 Maf-like protein KAB07_03190 PF04093 rod shape-determining protein MreD KAB07_03191 PF04085 rod shape-determining protein MreC KAB07_03193 PF02686 Glu-tRNAGln amidotransferase C subunit KAB07_03194 PF01425 Amidase KAB07_03195 PF02934 GatB/GatE catalytic domain KAB07_03195 PF02637 GatB domain KAB07_03201 PF05992 SbmA/BacA-like family KAB07_03202 PF13291 ACT domain KAB07_03202 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_03203 PF01734 Patatin-like phospholipase KAB07_03204 PF01235 Sodium:alanine symporter family KAB07_03206 PF00881 Nitroreductase family KAB07_03207 PF07690 Major Facilitator Superfamily KAB07_03208 PF12805 FUSC-like inner membrane protein yccS KAB07_03210 PF00258 Flavodoxin KAB07_03210 PF00175 Oxidoreductase NAD-binding domain KAB07_03210 PF00667 FAD binding domain KAB07_03218 PF03734 L,D-transpeptidase catalytic domain KAB07_03218 PF17969 L,D-transpeptidase C-terminal domain KAB07_03219 PF04304 Protein of unknown function (DUF454) KAB07_03221 PF08085 Entericidin EcnA/B family KAB07_03222 PF01546 Peptidase family M20/M25/M40 KAB07_03222 PF07687 Peptidase dimerisation domain KAB07_03224 PF00072 Response regulator receiver domain KAB07_03224 PF01584 CheW-like domain KAB07_03224 PF01627 Hpt domain KAB07_03224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03225 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KAB07_03225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAB07_03226 PF01584 CheW-like domain KAB07_03227 PF00072 Response regulator receiver domain KAB07_03228 PF00072 Response regulator receiver domain KAB07_03231 PF00873 AcrB/AcrD/AcrF family KAB07_03232 PF03129 Anticodon binding domain KAB07_03232 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAB07_03232 PF04073 Aminoacyl-tRNA editing domain KAB07_03233 PF07411 Domain of unknown function (DUF1508) KAB07_03234 PF03831 PhnA domain KAB07_03234 PF08274 PhnA Zinc-Ribbon KAB07_03235 PF04343 Protein of unknown function, DUF488 KAB07_03237 PF01571 Aminomethyltransferase folate-binding domain KAB07_03238 PF13098 Thioredoxin-like domain KAB07_03238 PF10411 Disulfide bond isomerase protein N-terminus KAB07_03241 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB07_03242 PF07715 TonB-dependent Receptor Plug Domain KAB07_03242 PF00593 TonB dependent receptor KAB07_03245 PF00593 TonB dependent receptor KAB07_03245 PF07715 TonB-dependent Receptor Plug Domain KAB07_03246 PF02245 Methylpurine-DNA glycosylase (MPG) KAB07_03247 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KAB07_03247 PF06827 Zinc finger found in FPG and IleRS KAB07_03247 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KAB07_03250 PF01741 Large-conductance mechanosensitive channel, MscL KAB07_03252 PF00860 Permease family KAB07_03253 PF08468 Methyltransferase small domain N-terminal KAB07_03253 PF05175 Methyltransferase small domain KAB07_03254 PF00324 Amino acid permease KAB07_03255 PF01139 tRNA-splicing ligase RtcB KAB07_03257 PF00691 OmpA family KAB07_03257 PF13505 Outer membrane protein beta-barrel domain KAB07_03259 PF00108 Thiolase, N-terminal domain KAB07_03259 PF02803 Thiolase, C-terminal domain KAB07_03261 PF00893 Small Multidrug Resistance protein KAB07_03263 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAB07_03263 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAB07_03264 PF01011 PQQ enzyme repeat KAB07_03265 PF04966 Carbohydrate-selective porin, OprB family KAB07_03266 PF02515 CoA-transferase family III KAB07_03267 PF12833 Helix-turn-helix domain KAB07_03267 PF02311 AraC-like ligand binding domain KAB07_03268 PF00108 Thiolase, N-terminal domain KAB07_03268 PF02803 Thiolase, C-terminal domain KAB07_03269 PF00378 Enoyl-CoA hydratase/isomerase KAB07_03269 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAB07_03269 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAB07_03275 PF03006 Haemolysin-III related KAB07_03276 PF00083 Sugar (and other) transporter KAB07_03276 PF07690 Major Facilitator Superfamily KAB07_03278 PF07516 SecA Wing and Scaffold domain KAB07_03278 PF07517 SecA DEAD-like domain KAB07_03278 PF02810 SEC-C motif KAB07_03278 PF01043 SecA preprotein cross-linking domain KAB07_03279 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAB07_03279 PF00578 AhpC/TSA family KAB07_03280 PF00753 Metallo-beta-lactamase superfamily KAB07_03283 PF02875 Mur ligase family, glutamate ligase domain KAB07_03283 PF08245 Mur ligase middle domain KAB07_03284 PF01039 Carboxyl transferase domain KAB07_03285 PF00290 Tryptophan synthase alpha chain KAB07_03290 PF00291 Pyridoxal-phosphate dependent enzyme KAB07_03291 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAB07_03292 PF07715 TonB-dependent Receptor Plug Domain KAB07_03292 PF00593 TonB dependent receptor KAB07_03293 PF01923 Cobalamin adenosyltransferase KAB07_03297 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KAB07_03298 PF00486 Transcriptional regulatory protein, C terminal KAB07_03298 PF00072 Response regulator receiver domain KAB07_03299 PF00672 HAMP domain KAB07_03299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03299 PF00512 His Kinase A (phospho-acceptor) domain KAB07_03301 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_03301 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_03301 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_03301 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB07_03302 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB07_03302 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_03302 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_03302 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_03303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03303 PF03466 LysR substrate binding domain KAB07_03304 PF02798 Glutathione S-transferase, N-terminal domain KAB07_03304 PF00043 Glutathione S-transferase, C-terminal domain KAB07_03305 PF06146 Phosphate-starvation-inducible E KAB07_03309 PF07715 TonB-dependent Receptor Plug Domain KAB07_03309 PF00593 TonB dependent receptor KAB07_03311 PF01336 OB-fold nucleic acid binding domain KAB07_03311 PF00152 tRNA synthetases class II (D, K and N) KAB07_03311 PF02938 GAD domain KAB07_03312 PF11380 Stealth protein CR2, conserved region 2 KAB07_03312 PF17102 Stealth protein CR3, conserved region 3 KAB07_03312 PF17101 Stealth protein CR1, conserved region 1 KAB07_03319 PF13439 Glycosyltransferase Family 4 KAB07_03319 PF00534 Glycosyl transferases group 1 KAB07_03320 PF00535 Glycosyl transferase family 2 KAB07_03321 PF01522 Polysaccharide deacetylase KAB07_03324 PF01063 Amino-transferase class IV KAB07_03325 PF03710 Glutamate-ammonia ligase adenylyltransferase KAB07_03325 PF08335 GlnD PII-uridylyltransferase KAB07_03326 PF07689 KaiB domain KAB07_03326 PF00512 His Kinase A (phospho-acceptor) domain KAB07_03326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03328 PF02547 Queuosine biosynthesis protein KAB07_03331 PF01702 Queuine tRNA-ribosyltransferase KAB07_03332 PF02699 Preprotein translocase subunit KAB07_03333 PF02355 Protein export membrane protein KAB07_03333 PF13721 SecD export protein N-terminal TM region KAB07_03333 PF07549 SecD/SecF GG Motif KAB07_03334 PF07549 SecD/SecF GG Motif KAB07_03334 PF02355 Protein export membrane protein KAB07_03335 PF02441 Flavoprotein KAB07_03335 PF04127 DNA / pantothenate metabolism flavoprotein KAB07_03336 PF04002 RadC-like JAB domain KAB07_03337 PF01062 Bestrophin, RFP-TM, chloride channel KAB07_03338 PF02811 PHP domain KAB07_03339 PF04279 Intracellular septation protein A KAB07_03340 PF03795 YCII-related domain KAB07_03342 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAB07_03342 PF01266 FAD dependent oxidoreductase KAB07_03344 PF04461 Protein of unknown function (DUF520) KAB07_03346 PF03061 Thioesterase superfamily KAB07_03347 PF00085 Thioredoxin KAB07_03348 PF00561 alpha/beta hydrolase fold KAB07_03349 PF04273 Putative phosphatase (DUF442) KAB07_03349 PF00753 Metallo-beta-lactamase superfamily KAB07_03351 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAB07_03351 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_03358 PF17152 Periplasmic sensor domain KAB07_03358 PF00990 Diguanylate cyclase, GGDEF domain KAB07_03359 PF00691 OmpA family KAB07_03359 PF01389 OmpA-like transmembrane domain KAB07_03360 PF10518 TAT (twin-arginine translocation) pathway signal sequence KAB07_03360 PF00149 Calcineurin-like phosphoesterase KAB07_03361 PF13091 PLD-like domain KAB07_03363 PF16360 GTP-binding GTPase Middle Region KAB07_03363 PF01926 50S ribosome-binding GTPase KAB07_03363 PF13167 GTP-binding GTPase N-terminal KAB07_03367 PF00149 Calcineurin-like phosphoesterase KAB07_03368 PF00398 Ribosomal RNA adenine dimethylase KAB07_03369 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KAB07_03370 PF00572 Ribosomal protein L13 KAB07_03371 PF00380 Ribosomal protein S9/S16 KAB07_03372 PF00043 Glutathione S-transferase, C-terminal domain KAB07_03372 PF13417 Glutathione S-transferase, N-terminal domain KAB07_03373 PF04386 Stringent starvation protein B KAB07_03375 PF00364 Biotin-requiring enzyme KAB07_03375 PF02785 Biotin carboxylase C-terminal domain KAB07_03375 PF00289 Biotin carboxylase, N-terminal domain KAB07_03375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAB07_03377 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_03377 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_03377 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_03378 PF01039 Carboxyl transferase domain KAB07_03381 PF17932 Tetracyclin repressor-like, C-terminal domain KAB07_03381 PF00440 Bacterial regulatory proteins, tetR family KAB07_03382 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_03382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_03382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_03391 PF01066 CDP-alcohol phosphatidyltransferase KAB07_03392 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KAB07_03396 PF00056 lactate/malate dehydrogenase, NAD binding domain KAB07_03396 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KAB07_03398 PF01551 Peptidase family M23 KAB07_03398 PF10145 Phage-related minor tail protein KAB07_03398 PF01464 Transglycosylase SLT domain KAB07_03399 PF04055 Radical SAM superfamily KAB07_03399 PF01938 TRAM domain KAB07_03399 PF00919 Uncharacterized protein family UPF0004 KAB07_03400 PF02562 PhoH-like protein KAB07_03401 PF02130 Uncharacterized protein family UPF0054 KAB07_03406 PF03358 NADPH-dependent FMN reductase KAB07_03407 PF03631 Virulence factor BrkB KAB07_03408 PF00892 EamA-like transporter family KAB07_03409 PF12833 Helix-turn-helix domain KAB07_03410 PF01557 Fumarylacetoacetate (FAA) hydrolase family KAB07_03419 PF17876 Cold shock domain KAB07_03419 PF08206 Ribonuclease B OB domain KAB07_03419 PF00773 RNB domain KAB07_03419 PF00575 S1 RNA binding domain KAB07_03419 PF08461 Ribonuclease R winged-helix domain KAB07_03420 PF01432 Peptidase family M3 KAB07_03421 PF09526 Probable metal-binding protein (DUF2387) KAB07_03428 PF03937 Flavinator of succinate dehydrogenase KAB07_03429 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_03429 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_03429 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_03430 PF00743 Flavin-binding monooxygenase-like KAB07_03431 PF01196 Ribosomal protein L17 KAB07_03432 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAB07_03432 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAB07_03432 PF01000 RNA polymerase Rpb3/RpoA insert domain KAB07_03433 PF00163 Ribosomal protein S4/S9 N-terminal domain KAB07_03433 PF01479 S4 domain KAB07_03434 PF00411 Ribosomal protein S11 KAB07_03435 PF00416 Ribosomal protein S13/S18 KAB07_03436 PF00444 Ribosomal protein L36 KAB07_03437 PF00344 SecY translocase KAB07_03438 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAB07_03439 PF00327 Ribosomal protein L30p/L7e KAB07_03440 PF00333 Ribosomal protein S5, N-terminal domain KAB07_03440 PF03719 Ribosomal protein S5, C-terminal domain KAB07_03441 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAB07_03442 PF00347 Ribosomal protein L6 KAB07_03443 PF00410 Ribosomal protein S8 KAB07_03444 PF00253 Ribosomal protein S14p/S29e KAB07_03445 PF00673 ribosomal L5P family C-terminus KAB07_03445 PF00281 Ribosomal protein L5 KAB07_03446 PF00467 KOW motif KAB07_03446 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAB07_03447 PF00238 Ribosomal protein L14p/L23e KAB07_03448 PF00366 Ribosomal protein S17 KAB07_03449 PF00831 Ribosomal L29 protein KAB07_03450 PF00252 Ribosomal protein L16p/L10e KAB07_03451 PF00189 Ribosomal protein S3, C-terminal domain KAB07_03451 PF07650 KH domain KAB07_03452 PF00237 Ribosomal protein L22p/L17e KAB07_03453 PF00203 Ribosomal protein S19 KAB07_03454 PF03947 Ribosomal Proteins L2, C-terminal domain KAB07_03454 PF00181 Ribosomal Proteins L2, RNA binding domain KAB07_03455 PF00276 Ribosomal protein L23 KAB07_03456 PF00573 Ribosomal protein L4/L1 family KAB07_03457 PF00297 Ribosomal protein L3 KAB07_03458 PF00338 Ribosomal protein S10p/S20e KAB07_03459 PF00117 Glutamine amidotransferase class-I KAB07_03460 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB07_03461 PF05872 Bacterial protein of unknown function (DUF853) KAB07_03462 PF00970 Oxidoreductase FAD-binding domain KAB07_03462 PF00042 Globin KAB07_03462 PF00175 Oxidoreductase NAD-binding domain KAB07_03463 PF02082 Transcriptional regulator KAB07_03464 PF01926 50S ribosome-binding GTPase KAB07_03466 PF00375 Sodium:dicarboxylate symporter family KAB07_03468 PF01553 Acyltransferase KAB07_03471 PF00270 DEAD/DEAH box helicase KAB07_03471 PF00271 Helicase conserved C-terminal domain KAB07_03471 PF17191 RecG wedge domain KAB07_03472 PF00156 Phosphoribosyl transferase domain KAB07_03473 PF00293 NUDIX domain KAB07_03474 PF03641 Possible lysine decarboxylase KAB07_03475 PF01544 CorA-like Mg2+ transporter protein KAB07_03477 PF05494 MlaC protein KAB07_03479 PF02405 Permease MlaE KAB07_03480 PF00005 ABC transporter KAB07_03481 PF00271 Helicase conserved C-terminal domain KAB07_03481 PF03880 DbpA RNA binding domain KAB07_03481 PF12343 Cold shock protein DEAD box A KAB07_03481 PF00270 DEAD/DEAH box helicase KAB07_03482 PF00459 Inositol monophosphatase family KAB07_03483 PF02780 Transketolase, C-terminal domain KAB07_03483 PF02779 Transketolase, pyrimidine binding domain KAB07_03483 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAB07_03484 PF00925 GTP cyclohydrolase II KAB07_03485 PF01218 Coproporphyrinogen III oxidase KAB07_03486 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAB07_03486 PF08501 Shikimate dehydrogenase substrate binding domain KAB07_03486 PF01488 Shikimate / quinate 5-dehydrogenase KAB07_03488 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAB07_03488 PF02770 Acyl-CoA dehydrogenase, middle domain KAB07_03488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAB07_03488 PF12806 Acetyl-CoA dehydrogenase C-terminal like KAB07_03490 PF04024 PspC domain KAB07_03491 PF00571 CBS domain KAB07_03496 PF02091 Glycyl-tRNA synthetase alpha subunit KAB07_03497 PF05746 DALR anticodon binding domain KAB07_03497 PF02092 Glycyl-tRNA synthetase beta subunit KAB07_03499 PF00892 EamA-like transporter family KAB07_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03500 PF03466 LysR substrate binding domain KAB07_03506 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KAB07_03507 PF04996 Succinylarginine dihydrolase KAB07_03508 PF00171 Aldehyde dehydrogenase family KAB07_03509 PF04958 Arginine N-succinyltransferase beta subunit KAB07_03510 PF00202 Aminotransferase class-III KAB07_03511 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAB07_03511 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAB07_03512 PF00324 Amino acid permease KAB07_03519 PF01594 AI-2E family transporter KAB07_03520 PF00080 Copper/zinc superoxide dismutase (SODC) KAB07_03521 PF12805 FUSC-like inner membrane protein yccS KAB07_03522 PF07690 Major Facilitator Superfamily KAB07_03524 PF02525 Flavodoxin-like fold KAB07_03525 PF03992 Antibiotic biosynthesis monooxygenase KAB07_03527 PF02913 FAD linked oxidases, C-terminal domain KAB07_03527 PF01565 FAD binding domain KAB07_03528 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAB07_03528 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAB07_03529 PF00892 EamA-like transporter family KAB07_03530 PF00892 EamA-like transporter family KAB07_03532 PF01925 Sulfite exporter TauE/SafE KAB07_03533 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAB07_03533 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAB07_03533 PF09157 Pseudouridine synthase II TruB, C-terminal KAB07_03534 PF03280 Proteobacterial lipase chaperone protein KAB07_03535 PF00561 alpha/beta hydrolase fold KAB07_03536 PF01245 Ribosomal protein L19 KAB07_03537 PF01746 tRNA (Guanine-1)-methyltransferase KAB07_03538 PF05239 PRC-barrel domain KAB07_03538 PF01782 RimM N-terminal domain KAB07_03539 PF00886 Ribosomal protein S16 KAB07_03547 PF02401 LytB protein KAB07_03548 PF00625 Guanylate kinase KAB07_03549 PF01192 RNA polymerase Rpb6 KAB07_03550 PF13291 ACT domain KAB07_03550 PF02824 TGS domain KAB07_03550 PF04607 Region found in RelA / SpoT proteins KAB07_03551 PF01042 Endoribonuclease L-PSP KAB07_03552 PF04324 BFD-like [2Fe-2S] binding domain KAB07_03553 PF00210 Ferritin-like domain KAB07_03554 PF15864 Protein glycosylation ligase KAB07_03554 PF04932 O-Antigen ligase KAB07_03554 PF11846 Virulence factor membrane-bound polymerase, C-terminal KAB07_03556 PF00114 Pilin (bacterial filament) KAB07_03556 PF07963 Prokaryotic N-terminal methylation motif KAB07_03558 PF04536 TPM domain KAB07_03559 PF04011 LemA family KAB07_03561 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAB07_03561 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAB07_03562 PF00310 Glutamine amidotransferases class-II KAB07_03562 PF01493 GXGXG motif KAB07_03562 PF01645 Conserved region in glutamate synthase KAB07_03562 PF04898 Glutamate synthase central domain KAB07_03564 PF01761 3-dehydroquinate synthase KAB07_03565 PF01202 Shikimate kinase KAB07_03566 PF11741 AMIN domain KAB07_03566 PF00263 Bacterial type II and III secretion system protein KAB07_03566 PF03958 Bacterial type II/III secretion system short domain KAB07_03566 PF07660 Secretin and TonB N terminus short domain KAB07_03571 PF00905 Penicillin binding protein transpeptidase domain KAB07_03571 PF00912 Transglycosylase KAB07_03571 PF17092 Penicillin-binding protein OB-like domain KAB07_03572 PF13847 Methyltransferase domain KAB07_03574 PF00953 Glycosyl transferase family 4 KAB07_03575 PF01225 Mur ligase family, catalytic domain KAB07_03575 PF08245 Mur ligase middle domain KAB07_03575 PF02875 Mur ligase family, glutamate ligase domain KAB07_03576 PF02875 Mur ligase family, glutamate ligase domain KAB07_03576 PF01225 Mur ligase family, catalytic domain KAB07_03576 PF08245 Mur ligase middle domain KAB07_03577 PF03717 Penicillin-binding Protein dimerisation domain KAB07_03577 PF00905 Penicillin binding protein transpeptidase domain KAB07_03579 PF01795 MraW methylase family KAB07_03582 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAB07_03585 PF00324 Amino acid permease KAB07_03591 PF01545 Cation efflux family KAB07_03592 PF00873 AcrB/AcrD/AcrF family KAB07_03593 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_03593 PF00529 HlyD membrane-fusion protein of T1SS KAB07_03596 PF04191 Phospholipid methyltransferase KAB07_03601 PF12848 ABC transporter KAB07_03601 PF00005 ABC transporter KAB07_03602 PF01053 Cys/Met metabolism PLP-dependent enzyme KAB07_03603 PF00106 short chain dehydrogenase KAB07_03604 PF01740 STAS domain KAB07_03604 PF00916 Sulfate permease family KAB07_03605 PF09371 Tex-like protein N-terminal domain KAB07_03605 PF17674 HHH domain KAB07_03605 PF16921 Tex protein YqgF-like domain KAB07_03605 PF00575 S1 RNA binding domain KAB07_03606 PF00072 Response regulator receiver domain KAB07_03606 PF00486 Transcriptional regulatory protein, C terminal KAB07_03607 PF00512 His Kinase A (phospho-acceptor) domain KAB07_03607 PF00672 HAMP domain KAB07_03607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03608 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KAB07_03608 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KAB07_03609 PF00583 Acetyltransferase (GNAT) family KAB07_03613 PF00475 Imidazoleglycerol-phosphate dehydratase KAB07_03614 PF00117 Glutamine amidotransferase class-I KAB07_03617 PF00977 Histidine biosynthesis protein KAB07_03620 PF03992 Antibiotic biosynthesis monooxygenase KAB07_03623 PF01636 Phosphotransferase enzyme family KAB07_03624 PF00977 Histidine biosynthesis protein KAB07_03627 PF00230 Major intrinsic protein KAB07_03632 PF02705 K+ potassium transporter KAB07_03636 PF02525 Flavodoxin-like fold KAB07_03637 PF01638 HxlR-like helix-turn-helix KAB07_03642 PF02311 AraC-like ligand binding domain KAB07_03642 PF12833 Helix-turn-helix domain KAB07_03643 PF00248 Aldo/keto reductase family KAB07_03647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03647 PF03466 LysR substrate binding domain KAB07_03648 PF07690 Major Facilitator Superfamily KAB07_03653 PF01593 Flavin containing amine oxidoreductase KAB07_03654 PF02678 Pirin KAB07_03654 PF05726 Pirin C-terminal cupin domain KAB07_03655 PF00857 Isochorismatase family KAB07_03656 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03657 PF00171 Aldehyde dehydrogenase family KAB07_03658 PF00202 Aminotransferase class-III KAB07_03659 PF00392 Bacterial regulatory proteins, gntR family KAB07_03659 PF00155 Aminotransferase class I and II KAB07_03660 PF00324 Amino acid permease KAB07_03662 PF03591 AzlC protein KAB07_03664 PF00436 Single-strand binding protein family KAB07_03666 PF07690 Major Facilitator Superfamily KAB07_03668 PF02581 Thiamine monophosphate synthase KAB07_03668 PF03070 TENA/THI-4/PQQC family KAB07_03668 PF08543 Phosphomethylpyrimidine kinase KAB07_03669 PF06942 GlpM protein KAB07_03671 PF00107 Zinc-binding dehydrogenase KAB07_03671 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_03672 PF00440 Bacterial regulatory proteins, tetR family KAB07_03672 PF16925 Tetracyclin repressor-like, C-terminal domain KAB07_03673 PF00005 ABC transporter KAB07_03673 PF17755 UvrA DNA-binding domain KAB07_03673 PF17760 UvrA interaction domain KAB07_03675 PF17158 Membrane-associated sensor, integral membrane domain KAB07_03675 PF00990 Diguanylate cyclase, GGDEF domain KAB07_03677 PF02028 BCCT, betaine/carnitine/choline family transporter KAB07_03679 PF00474 Sodium:solute symporter family KAB07_03680 PF04341 Protein of unknown function, DUF485 KAB07_03681 PF00072 Response regulator receiver domain KAB07_03681 PF01627 Hpt domain KAB07_03681 PF00512 His Kinase A (phospho-acceptor) domain KAB07_03681 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03681 PF00672 HAMP domain KAB07_03683 PF00196 Bacterial regulatory proteins, luxR family KAB07_03683 PF00072 Response regulator receiver domain KAB07_03684 PF03358 NADPH-dependent FMN reductase KAB07_03685 PF00296 Luciferase-like monooxygenase KAB07_03686 PF00872 Transposase, Mutator family KAB07_03687 PF01037 Lrp/AsnC ligand binding domain KAB07_03688 PF00857 Isochorismatase family KAB07_03689 PF16177 Acetyl-coenzyme A synthetase N-terminus KAB07_03689 PF00501 AMP-binding enzyme KAB07_03689 PF13193 AMP-binding enzyme C-terminal domain KAB07_03691 PF00924 Mechanosensitive ion channel KAB07_03692 PF04452 RNA methyltransferase KAB07_03693 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAB07_03694 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAB07_03697 PF03462 PCRF domain KAB07_03697 PF00472 RF-1 domain KAB07_03699 PF01368 DHH family KAB07_03699 PF17768 RecJ OB domain KAB07_03699 PF02272 DHHA1 domain KAB07_03700 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KAB07_03700 PF01243 Pyridoxamine 5'-phosphate oxidase KAB07_03701 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAB07_03701 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAB07_03701 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAB07_03701 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAB07_03702 PF00571 CBS domain KAB07_03702 PF00478 IMP dehydrogenase / GMP reductase domain KAB07_03703 PF03692 Putative zinc- or iron-chelating domain KAB07_03704 PF01613 Flavin reductase like domain KAB07_03704 PF00258 Flavodoxin KAB07_03705 PF00593 TonB dependent receptor KAB07_03705 PF07715 TonB-dependent Receptor Plug Domain KAB07_03706 PF01169 Uncharacterized protein family UPF0016 KAB07_03708 PF02817 e3 binding domain KAB07_03708 PF00364 Biotin-requiring enzyme KAB07_03708 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAB07_03709 PF17831 Pyruvate dehydrogenase E1 component middle domain KAB07_03709 PF00456 Transketolase, thiamine diphosphate binding domain KAB07_03710 PF01551 Peptidase family M23 KAB07_03712 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAB07_03713 PF12327 FtsZ family, C-terminal domain KAB07_03713 PF00091 Tubulin/FtsZ family, GTPase domain KAB07_03714 PF02491 SHS2 domain inserted in FTSA KAB07_03715 PF03799 Cell division protein FtsQ KAB07_03715 PF08478 POTRA domain, FtsQ-type KAB07_03716 PF07478 D-ala D-ala ligase C-terminus KAB07_03716 PF01820 D-ala D-ala ligase N-terminus KAB07_03717 PF08245 Mur ligase middle domain KAB07_03717 PF02875 Mur ligase family, glutamate ligase domain KAB07_03717 PF01225 Mur ligase family, catalytic domain KAB07_03718 PF03033 Glycosyltransferase family 28 N-terminal domain KAB07_03718 PF04101 Glycosyltransferase family 28 C-terminal domain KAB07_03719 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KAB07_03719 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KAB07_03721 PF00593 TonB dependent receptor KAB07_03721 PF07715 TonB-dependent Receptor Plug Domain KAB07_03722 PF00156 Phosphoribosyl transferase domain KAB07_03723 PF03372 Endonuclease/Exonuclease/phosphatase family KAB07_03724 PF03960 ArsC family KAB07_03726 PF07859 alpha/beta hydrolase fold KAB07_03727 PF07694 5TMR of 5TMR-LYT KAB07_03727 PF00990 Diguanylate cyclase, GGDEF domain KAB07_03728 PF02683 Cytochrome C biogenesis protein transmembrane region KAB07_03728 PF11412 Disulphide bond corrector protein DsbC KAB07_03734 PF00576 HIUase/Transthyretin family KAB07_03735 PF00860 Permease family KAB07_03737 PF01494 FAD binding domain KAB07_03738 PF03561 Allantoicase repeat KAB07_03739 PF04115 Ureidoglycolate lyase KAB07_03740 PF00106 short chain dehydrogenase KAB07_03741 PF01751 Toprim domain KAB07_03741 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03741 PF00204 DNA gyrase B KAB07_03741 PF00986 DNA gyrase B subunit, carboxyl terminus KAB07_03742 PF05728 Uncharacterised protein family (UPF0227) KAB07_03745 PF00877 NlpC/P60 family KAB07_03745 PF01476 LysM domain KAB07_03746 PF04717 Type VI secretion system, phage-baseplate injector KAB07_03747 PF02600 Disulfide bond formation protein DsbB KAB07_03748 PF04262 Glutamate-cysteine ligase KAB07_03751 PF04286 Protein of unknown function (DUF445) KAB07_03752 PF00155 Aminotransferase class I and II KAB07_03753 PF01554 MatE KAB07_03754 PF00106 short chain dehydrogenase KAB07_03756 PF00072 Response regulator receiver domain KAB07_03756 PF00486 Transcriptional regulatory protein, C terminal KAB07_03757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAB07_03757 PF00989 PAS fold KAB07_03757 PF11808 Phosphate regulon sensor protein PhoR KAB07_03757 PF00512 His Kinase A (phospho-acceptor) domain KAB07_03761 PF03069 Acetamidase/Formamidase family KAB07_03762 PF02666 Phosphatidylserine decarboxylase KAB07_03763 PF00581 Rhodanese-like domain KAB07_03764 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAB07_03764 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAB07_03765 PF02580 D-Tyr-tRNA(Tyr) deacylase KAB07_03770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAB07_03770 PF00925 GTP cyclohydrolase II KAB07_03771 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAB07_03772 PF01029 NusB family KAB07_03773 PF00586 AIR synthase related protein, N-terminal domain KAB07_03773 PF02769 AIR synthase related protein, C-terminal domain KAB07_03774 PF04608 Phosphatidylglycerophosphatase A KAB07_03775 PF14602 Hexapeptide repeat of succinyl-transferase KAB07_03775 PF00132 Bacterial transferase hexapeptide (six repeats) KAB07_03775 PF12804 MobA-like NTP transferase domain KAB07_03776 PF01380 SIS domain KAB07_03777 PF01177 Asp/Glu/Hydantoin racemase KAB07_03780 PF00491 Arginase family KAB07_03781 PF01979 Amidohydrolase family KAB07_03782 PF00324 Amino acid permease KAB07_03783 PF00221 Aromatic amino acid lyase KAB07_03784 PF01175 Urocanase Rossmann-like domain KAB07_03784 PF17392 Urocanase C-terminal domain KAB07_03784 PF17391 Urocanase N-terminal domain KAB07_03785 PF05962 HutD KAB07_03786 PF00392 Bacterial regulatory proteins, gntR family KAB07_03786 PF07702 UTRA domain KAB07_03788 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAB07_03788 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAB07_03790 PF00324 Amino acid permease KAB07_03792 PF02798 Glutathione S-transferase, N-terminal domain KAB07_03792 PF14497 Glutathione S-transferase, C-terminal domain KAB07_03793 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB07_03795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAB07_03796 PF04463 Protein of unknown function (DUF523) KAB07_03797 PF01554 MatE KAB07_03798 PF01758 Sodium Bile acid symporter family KAB07_03799 PF00857 Isochorismatase family KAB07_03800 PF00701 Dihydrodipicolinate synthetase family KAB07_03802 PF01259 SAICAR synthetase KAB07_03804 PF01226 Formate/nitrite transporter KAB07_03805 PF16193 AAA C-terminal domain KAB07_03805 PF00004 ATPase family associated with various cellular activities (AAA) KAB07_03805 PF12002 MgsA AAA+ ATPase C terminal KAB07_03806 PF07995 Glucose / Sorbosone dehydrogenase KAB07_03807 PF03692 Putative zinc- or iron-chelating domain KAB07_03808 PF07043 Protein of unknown function (DUF1328) KAB07_03811 PF14815 NUDIX domain KAB07_03811 PF10576 Iron-sulfur binding domain of endonuclease III KAB07_03811 PF00633 Helix-hairpin-helix motif KAB07_03811 PF00730 HhH-GPD superfamily base excision DNA repair protein KAB07_03814 PF03352 Methyladenine glycosylase KAB07_03815 PF00107 Zinc-binding dehydrogenase KAB07_03815 PF08240 Alcohol dehydrogenase GroES-like domain KAB07_03816 PF00155 Aminotransferase class I and II KAB07_03816 PF00392 Bacterial regulatory proteins, gntR family KAB07_03818 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03818 PF03466 LysR substrate binding domain KAB07_03819 PF00248 Aldo/keto reductase family KAB07_03820 PF07690 Major Facilitator Superfamily KAB07_03822 PF05173 Dihydrodipicolinate reductase, C-terminus KAB07_03822 PF01113 Dihydrodipicolinate reductase, N-terminus KAB07_03824 PF00226 DnaJ domain KAB07_03824 PF00684 DnaJ central domain KAB07_03824 PF01556 DnaJ C terminal domain KAB07_03826 PF00873 AcrB/AcrD/AcrF family KAB07_03827 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAB07_03828 PF08361 MAATS-type transcriptional repressor, C-terminal region KAB07_03828 PF00440 Bacterial regulatory proteins, tetR family KAB07_03829 PF00311 Phosphoenolpyruvate carboxylase KAB07_03830 PF00860 Permease family KAB07_03831 PF03466 LysR substrate binding domain KAB07_03831 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAB07_03834 PF00920 Dehydratase family KAB07_03835 PF00551 Formyl transferase KAB07_03835 PF02911 Formyl transferase, C-terminal domain KAB07_03836 PF01029 NusB family KAB07_03836 PF01189 16S rRNA methyltransferase RsmB/F KAB07_03840 PF00209 Sodium:neurotransmitter symporter family KAB07_03848 PF00579 tRNA synthetases class I (W and Y) KAB07_03849 PF03702 Anhydro-N-acetylmuramic acid kinase KAB07_03850 PF00561 alpha/beta hydrolase fold KAB07_03851 PF01521 Iron-sulphur cluster biosynthesis KAB07_03856 PF01464 Transglycosylase SLT domain KAB07_03863 PF10411 Disulfide bond isomerase protein N-terminus KAB07_03863 PF13098 Thioredoxin-like domain KAB07_03870 PF06834 TraU protein KAB07_03872 PF06986 Type-1V conjugative transfer system mating pair stabilisation KAB07_03875 PF06122 Conjugative relaxosome accessory transposon protein KAB07_03879 PF11799 impB/mucB/samB family C-terminal domain KAB07_03879 PF13438 Domain of unknown function (DUF4113) KAB07_03879 PF00817 impB/mucB/samB family KAB07_03897 PF00565 Staphylococcal nuclease homologue KAB07_03898 PF00816 H-NS histone family KAB07_03909 PF13614 AAA domain KAB07_03910 PF17762 HTH domain found in ParB protein KAB07_03910 PF02195 ParB-like nuclease domain KAB07_03914 PF05816 Toxic anion resistance protein (TelA) KAB07_03934 PF01556 DnaJ C terminal domain KAB07_03934 PF00226 DnaJ domain KAB07_03934 PF00684 DnaJ central domain KAB07_03941 PF07057 DNA helicase TraI KAB07_03941 PF18340 DNA relaxase TraI 2B/2B-like domain KAB07_03941 PF08751 TrwC relaxase KAB07_03941 PF18272 single-stranded DNA binding TraI N-terminal subdomain KAB07_03949 PF02796 Helix-turn-helix domain of resolvase KAB07_03949 PF00239 Resolvase, N terminal domain