locus-tag class description J6B58_00005 PF01078 Magnesium chelatase, subunit ChlI J6B58_00005 PF13335 Magnesium chelatase, subunit ChlI C-terminal J6B58_00015 PF00155 Aminotransferase class I and II J6B58_00015 PF00392 Bacterial regulatory proteins, gntR family J6B58_00025 PF00701 Dihydrodipicolinate synthetase family J6B58_00035 PF03573 outer membrane porin, OprD family J6B58_00040 PF00719 Inorganic pyrophosphatase J6B58_00055 PF13193 AMP-binding enzyme C-terminal domain J6B58_00055 PF00501 AMP-binding enzyme J6B58_00060 PF03989 DNA gyrase C-terminal domain, beta-propeller J6B58_00060 PF00521 DNA gyrase/topoisomerase IV, subunit A J6B58_00065 PF07690 Major Facilitator Superfamily J6B58_00070 PF03458 UPF0126 domain J6B58_00075 PF02810 SEC-C motif J6B58_00080 PF03471 Transporter associated domain J6B58_00080 PF03741 Integral membrane protein TerC family J6B58_00085 PF03641 Possible lysine decarboxylase J6B58_00090 PF07690 Major Facilitator Superfamily J6B58_00100 PF11798 IMS family HHH motif J6B58_00100 PF00817 impB/mucB/samB family J6B58_00100 PF11799 impB/mucB/samB family C-terminal domain J6B58_00115 PF11842 Domain of unknown function (DUF3362) J6B58_00115 PF04055 Radical SAM superfamily J6B58_00115 PF08497 Radical SAM N-terminal J6B58_00135 PF03358 NADPH-dependent FMN reductase J6B58_00145 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_00205 PF01327 Polypeptide deformylase J6B58_00215 PF17782 DprA winged helix domain J6B58_00215 PF02481 DNA recombination-mediator protein A J6B58_00220 PF01300 Telomere recombination J6B58_00225 PF00892 EamA-like transporter family J6B58_00230 PF00440 Bacterial regulatory proteins, tetR family J6B58_00235 PF07690 Major Facilitator Superfamily J6B58_00245 PF00255 Glutathione peroxidase J6B58_00255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J6B58_00260 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6B58_00260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6B58_00265 PF00231 ATP synthase J6B58_00270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6B58_00270 PF02874 ATP synthase alpha/beta family, beta-barrel domain J6B58_00270 PF00306 ATP synthase alpha/beta chain, C terminal domain J6B58_00275 PF00213 ATP synthase delta (OSCP) subunit J6B58_00280 PF00430 ATP synthase B/B' CF(0) J6B58_00285 PF00137 ATP synthase subunit C J6B58_00290 PF00119 ATP synthase A chain J6B58_00310 PF00005 ABC transporter J6B58_00315 PF00950 ABC 3 transport family J6B58_00320 PF01810 LysE type translocator J6B58_00325 PF04261 Dyp-type peroxidase family J6B58_00330 PF03949 Malic enzyme, NAD binding domain J6B58_00330 PF00390 Malic enzyme, N-terminal domain J6B58_00335 PF03485 Arginyl tRNA synthetase N terminal domain J6B58_00335 PF05746 DALR anticodon binding domain J6B58_00335 PF00750 tRNA synthetases class I (R) J6B58_00355 PF05726 Pirin C-terminal cupin domain J6B58_00355 PF02678 Pirin J6B58_00365 PF03551 Transcriptional regulator PadR-like family J6B58_00370 PF13427 Domain of unknown function (DUF4111) J6B58_00370 PF01909 Nucleotidyltransferase domain J6B58_00375 PF00117 Glutamine amidotransferase class-I J6B58_00375 PF02540 NAD synthase J6B58_00375 PF00958 GMP synthase C terminal domain J6B58_00380 PF04286 Protein of unknown function (DUF445) J6B58_00385 PF07681 DoxX J6B58_00390 PF09335 SNARE associated Golgi protein J6B58_00405 PF13614 AAA domain J6B58_00415 PF01722 BolA-like protein J6B58_00430 PF01648 4'-phosphopantetheinyl transferase superfamily J6B58_00435 PF12697 Alpha/beta hydrolase family J6B58_00450 PF00501 AMP-binding enzyme J6B58_00450 PF00975 Thioesterase domain J6B58_00450 PF00550 Phosphopantetheine attachment site J6B58_00450 PF13193 AMP-binding enzyme C-terminal domain J6B58_00450 PF00668 Condensation domain J6B58_00455 PF00550 Phosphopantetheine attachment site J6B58_00455 PF08242 Methyltransferase domain J6B58_00455 PF02801 Beta-ketoacyl synthase, C-terminal domain J6B58_00455 PF00109 Beta-ketoacyl synthase, N-terminal domain J6B58_00455 PF16197 Ketoacyl-synthetase C-terminal extension J6B58_00455 PF00975 Thioesterase domain J6B58_00455 PF14765 Polyketide synthase dehydratase J6B58_00460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_00460 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_00460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_00465 PF00501 AMP-binding enzyme J6B58_00470 PF00196 Bacterial regulatory proteins, luxR family J6B58_00470 PF03472 Autoinducer binding domain J6B58_00480 PF00765 Autoinducer synthase J6B58_00485 PF07690 Major Facilitator Superfamily J6B58_00485 PF00083 Sugar (and other) transporter J6B58_00490 PF00378 Enoyl-CoA hydratase/isomerase J6B58_00495 PF00378 Enoyl-CoA hydratase/isomerase J6B58_00500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_00500 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_00500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_00505 PF00501 AMP-binding enzyme J6B58_00505 PF13193 AMP-binding enzyme C-terminal domain J6B58_00510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6B58_00510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6B58_00515 PF00171 Aldehyde dehydrogenase family J6B58_00525 PF00324 Amino acid permease J6B58_00530 PF00324 Amino acid permease J6B58_00535 PF01042 Endoribonuclease L-PSP J6B58_00540 PF01168 Alanine racemase, N-terminal domain J6B58_00540 PF00842 Alanine racemase, C-terminal domain J6B58_00545 PF01266 FAD dependent oxidoreductase J6B58_00550 PF01037 Lrp/AsnC ligand binding domain J6B58_00560 PF07715 TonB-dependent Receptor Plug Domain J6B58_00560 PF00593 TonB dependent receptor J6B58_00575 PF00849 RNA pseudouridylate synthase J6B58_00590 PF00872 Transposase, Mutator family J6B58_00600 PF13737 Transposase DDE domain J6B58_00620 PF00330 Aconitase family (aconitate hydratase) J6B58_00620 PF00694 Aconitase C-terminal domain J6B58_00625 PF00285 Citrate synthase, C-terminal domain J6B58_00635 PF07729 FCD domain J6B58_00635 PF00392 Bacterial regulatory proteins, gntR family J6B58_00645 PF00155 Aminotransferase class I and II J6B58_00650 PF01565 FAD binding domain J6B58_00650 PF09330 D-lactate dehydrogenase, membrane binding J6B58_00655 PF01070 FMN-dependent dehydrogenase J6B58_00660 PF00392 Bacterial regulatory proteins, gntR family J6B58_00660 PF07729 FCD domain J6B58_00665 PF02652 L-lactate permease J6B58_00670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6B58_00670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6B58_00670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6B58_00670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6B58_00675 PF16363 GDP-mannose 4,6 dehydratase J6B58_00680 PF00342 Phosphoglucose isomerase J6B58_00685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J6B58_00685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J6B58_00685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J6B58_00690 PF00483 Nucleotidyl transferase J6B58_00695 PF02719 Polysaccharide biosynthesis protein J6B58_00705 PF00953 Glycosyl transferase family 4 J6B58_00705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J6B58_00710 PF01370 NAD dependent epimerase/dehydratase family J6B58_00715 PF13579 Glycosyl transferase 4-like domain J6B58_00720 PF02350 UDP-N-acetylglucosamine 2-epimerase J6B58_00725 PF01370 NAD dependent epimerase/dehydratase family J6B58_00730 PF02719 Polysaccharide biosynthesis protein J6B58_00730 PF08485 Polysaccharide biosynthesis protein C-terminal J6B58_00770 PF02348 Cytidylyltransferase J6B58_00775 PF00483 Nucleotidyl transferase J6B58_00785 PF03102 NeuB family J6B58_00785 PF08666 SAF domain J6B58_00790 PF02350 UDP-N-acetylglucosamine 2-epimerase J6B58_00795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J6B58_00800 PF02719 Polysaccharide biosynthesis protein J6B58_00805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J6B58_00805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J6B58_00805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J6B58_00810 PF02563 Polysaccharide biosynthesis/export protein J6B58_00810 PF10531 SLBB domain J6B58_00810 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J6B58_00815 PF01451 Low molecular weight phosphotyrosine protein phosphatase J6B58_00820 PF13807 G-rich domain on putative tyrosine kinase J6B58_00820 PF13614 AAA domain J6B58_00820 PF02706 Chain length determinant protein J6B58_00825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6B58_00825 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6B58_00830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6B58_00830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J6B58_00835 PF03023 Lipid II flippase MurJ J6B58_00840 PF01510 N-acetylmuramoyl-L-alanine amidase J6B58_00845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J6B58_00845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J6B58_00855 PF05506 Domain of unknown function (DUF756) J6B58_00855 PF04185 Phosphoesterase family J6B58_00865 PF01138 3' exoribonuclease family, domain 1 J6B58_00865 PF03725 3' exoribonuclease family, domain 2 J6B58_00870 PF00487 Fatty acid desaturase J6B58_00875 PF00175 Oxidoreductase NAD-binding domain J6B58_00880 PF00440 Bacterial regulatory proteins, tetR family J6B58_00885 PF08360 QacR-like protein, C-terminal region J6B58_00885 PF00440 Bacterial regulatory proteins, tetR family J6B58_00890 PF01323 DSBA-like thioredoxin domain J6B58_00900 PF13419 Haloacid dehalogenase-like hydrolase J6B58_00905 PF00106 short chain dehydrogenase J6B58_00920 PF00696 Amino acid kinase family J6B58_00920 PF00583 Acetyltransferase (GNAT) family J6B58_00925 PF09084 NMT1/THI5 like J6B58_00930 PF09084 NMT1/THI5 like J6B58_00935 PF00296 Luciferase-like monooxygenase J6B58_00940 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_00945 PF00005 ABC transporter J6B58_00950 PF08362 YcdC-like protein, C-terminal region J6B58_00950 PF00440 Bacterial regulatory proteins, tetR family J6B58_00955 PF01048 Phosphorylase superfamily J6B58_00965 PF06574 FAD synthetase J6B58_00965 PF01687 Riboflavin kinase J6B58_00970 PF08264 Anticodon-binding domain of tRNA J6B58_00970 PF00133 tRNA synthetases class I (I, L, M and V) J6B58_00970 PF06827 Zinc finger found in FPG and IleRS J6B58_00975 PF01252 Signal peptidase (SPase) II J6B58_00980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6B58_01020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J6B58_01025 PF07859 alpha/beta hydrolase fold J6B58_01050 PF01025 GrpE J6B58_01055 PF00012 Hsp70 protein J6B58_01075 PF13406 Transglycosylase SLT domain J6B58_01080 PF02222 ATP-grasp domain J6B58_01080 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J6B58_01085 PF00731 AIR carboxylase J6B58_01095 PF01225 Mur ligase family, catalytic domain J6B58_01095 PF02875 Mur ligase family, glutamate ligase domain J6B58_01095 PF08245 Mur ligase middle domain J6B58_01105 PF01569 PAP2 superfamily J6B58_01110 PF03741 Integral membrane protein TerC family J6B58_01120 PF03738 Glutathionylspermidine synthase preATP-grasp J6B58_01125 PF00355 Rieske [2Fe-2S] domain J6B58_01130 PF01979 Amidohydrolase family J6B58_01135 PF00156 Phosphoribosyl transferase domain J6B58_01145 PF13098 Thioredoxin-like domain J6B58_01145 PF10411 Disulfide bond isomerase protein N-terminus J6B58_01150 PF16916 Dimerisation domain of Zinc Transporter J6B58_01150 PF01545 Cation efflux family J6B58_01155 PF02583 Metal-sensitive transcriptional repressor J6B58_01160 PF01926 50S ribosome-binding GTPase J6B58_01160 PF12631 MnmE helical domain J6B58_01160 PF10396 GTP-binding protein TrmE N-terminus J6B58_01165 PF14849 YidC periplasmic domain J6B58_01165 PF02096 60Kd inner membrane protein J6B58_01170 PF01809 Putative membrane protein insertion efficiency factor J6B58_01175 PF00825 Ribonuclease P J6B58_01180 PF00468 Ribosomal protein L34 J6B58_01185 PF00308 Bacterial dnaA protein J6B58_01185 PF08299 Bacterial dnaA protein helix-turn-helix J6B58_01185 PF11638 DnaA N-terminal domain J6B58_01190 PF00712 DNA polymerase III beta subunit, N-terminal domain J6B58_01190 PF02768 DNA polymerase III beta subunit, C-terminal domain J6B58_01190 PF02767 DNA polymerase III beta subunit, central domain J6B58_01195 PF02463 RecF/RecN/SMC N terminal domain J6B58_01200 PF18053 DNA gyrase B subunit insert domain J6B58_01200 PF01751 Toprim domain J6B58_01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_01200 PF00986 DNA gyrase B subunit, carboxyl terminus J6B58_01200 PF00204 DNA gyrase B J6B58_01210 PF09335 SNARE associated Golgi protein J6B58_01215 PF00005 ABC transporter J6B58_01215 PF12848 ABC transporter J6B58_01235 PF01521 Iron-sulphur cluster biosynthesis J6B58_01240 PF00561 alpha/beta hydrolase fold J6B58_01245 PF03702 Anhydro-N-acetylmuramic acid kinase J6B58_01250 PF00579 tRNA synthetases class I (W and Y) J6B58_01290 PF00209 Sodium:neurotransmitter symporter family J6B58_01300 PF01189 16S rRNA methyltransferase RsmB/F J6B58_01300 PF01029 NusB family J6B58_01305 PF02911 Formyl transferase, C-terminal domain J6B58_01305 PF00551 Formyl transferase J6B58_01310 PF00920 Dehydratase family J6B58_01325 PF03466 LysR substrate binding domain J6B58_01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_01330 PF00860 Permease family J6B58_01335 PF00311 Phosphoenolpyruvate carboxylase J6B58_01340 PF08361 MAATS-type transcriptional repressor, C-terminal region J6B58_01340 PF00440 Bacterial regulatory proteins, tetR family J6B58_01345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_01350 PF00873 AcrB/AcrD/AcrF family J6B58_01360 PF00684 DnaJ central domain J6B58_01360 PF01556 DnaJ C terminal domain J6B58_01360 PF00226 DnaJ domain J6B58_01370 PF01113 Dihydrodipicolinate reductase, N-terminus J6B58_01370 PF05173 Dihydrodipicolinate reductase, C-terminus J6B58_01380 PF07690 Major Facilitator Superfamily J6B58_01385 PF00248 Aldo/keto reductase family J6B58_01390 PF03466 LysR substrate binding domain J6B58_01390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_01405 PF00392 Bacterial regulatory proteins, gntR family J6B58_01405 PF00155 Aminotransferase class I and II J6B58_01410 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_01410 PF00107 Zinc-binding dehydrogenase J6B58_01415 PF03352 Methyladenine glycosylase J6B58_01430 PF10576 Iron-sulfur binding domain of endonuclease III J6B58_01430 PF00633 Helix-hairpin-helix motif J6B58_01430 PF00730 HhH-GPD superfamily base excision DNA repair protein J6B58_01430 PF14815 NUDIX domain J6B58_01440 PF02230 Phospholipase/Carboxylesterase J6B58_01445 PF07043 Protein of unknown function (DUF1328) J6B58_01450 PF03692 Putative zinc- or iron-chelating domain J6B58_01455 PF07995 Glucose / Sorbosone dehydrogenase J6B58_01460 PF16193 AAA C-terminal domain J6B58_01460 PF12002 MgsA AAA+ ATPase C terminal J6B58_01460 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_01475 PF01259 SAICAR synthetase J6B58_01485 PF00701 Dihydrodipicolinate synthetase family J6B58_01490 PF00857 Isochorismatase family J6B58_01495 PF01758 Sodium Bile acid symporter family J6B58_01500 PF01554 MatE J6B58_01505 PF04463 Protein of unknown function (DUF523) J6B58_01510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6B58_01520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6B58_01525 PF14497 Glutathione S-transferase, C-terminal domain J6B58_01525 PF02798 Glutathione S-transferase, N-terminal domain J6B58_01535 PF00324 Amino acid permease J6B58_01545 PF02492 CobW/HypB/UreG, nucleotide-binding domain J6B58_01545 PF07683 Cobalamin synthesis protein cobW C-terminal domain J6B58_01555 PF00392 Bacterial regulatory proteins, gntR family J6B58_01555 PF07702 UTRA domain J6B58_01560 PF05962 HutD J6B58_01565 PF17392 Urocanase C-terminal domain J6B58_01565 PF17391 Urocanase N-terminal domain J6B58_01565 PF01175 Urocanase Rossmann-like domain J6B58_01570 PF00221 Aromatic amino acid lyase J6B58_01575 PF00324 Amino acid permease J6B58_01580 PF01979 Amidohydrolase family J6B58_01585 PF00491 Arginase family J6B58_01600 PF01177 Asp/Glu/Hydantoin racemase J6B58_01605 PF01380 SIS domain J6B58_01610 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_01610 PF14602 Hexapeptide repeat of succinyl-transferase J6B58_01610 PF12804 MobA-like NTP transferase domain J6B58_01615 PF04608 Phosphatidylglycerophosphatase A J6B58_01620 PF00586 AIR synthase related protein, N-terminal domain J6B58_01620 PF02769 AIR synthase related protein, C-terminal domain J6B58_01625 PF01029 NusB family J6B58_01630 PF00885 6,7-dimethyl-8-ribityllumazine synthase J6B58_01635 PF00925 GTP cyclohydrolase II J6B58_01635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J6B58_01660 PF02580 D-Tyr-tRNA(Tyr) deacylase J6B58_01665 PF00199 Catalase J6B58_01665 PF06628 Catalase-related immune-responsive J6B58_01675 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J6B58_01675 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J6B58_01680 PF00581 Rhodanese-like domain J6B58_01685 PF02666 Phosphatidylserine decarboxylase J6B58_01690 PF03069 Acetamidase/Formamidase family J6B58_01695 PF01547 Bacterial extracellular solute-binding protein J6B58_01705 PF00989 PAS fold J6B58_01705 PF11808 Phosphate regulon sensor protein PhoR J6B58_01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_01705 PF00512 His Kinase A (phospho-acceptor) domain J6B58_01710 PF00486 Transcriptional regulatory protein, C terminal J6B58_01710 PF00072 Response regulator receiver domain J6B58_01720 PF00106 short chain dehydrogenase J6B58_01725 PF01554 MatE J6B58_01730 PF00155 Aminotransferase class I and II J6B58_01735 PF04286 Protein of unknown function (DUF445) J6B58_01750 PF04262 Glutamate-cysteine ligase J6B58_01755 PF02600 Disulfide bond formation protein DsbB J6B58_01760 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J6B58_01760 PF13296 Putative type VI secretion system Rhs element Vgr J6B58_01760 PF04717 Type VI secretion system, phage-baseplate injector J6B58_01775 PF00665 Integrase core domain J6B58_01775 PF13936 Helix-turn-helix domain J6B58_01790 PF00118 TCP-1/cpn60 chaperonin family J6B58_01795 PF00166 Chaperonin 10 Kd subunit J6B58_01800 PF03091 CutA1 divalent ion tolerance protein J6B58_01805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J6B58_01810 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J6B58_01820 PF00753 Metallo-beta-lactamase superfamily J6B58_01825 PF13936 Helix-turn-helix domain J6B58_01825 PF00665 Integrase core domain J6B58_01845 PF05728 Uncharacterised protein family (UPF0227) J6B58_01850 PF00986 DNA gyrase B subunit, carboxyl terminus J6B58_01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_01850 PF01751 Toprim domain J6B58_01850 PF00204 DNA gyrase B J6B58_01855 PF00106 short chain dehydrogenase J6B58_01860 PF04115 Ureidoglycolate lyase J6B58_01865 PF03561 Allantoicase repeat J6B58_01870 PF01494 FAD binding domain J6B58_01880 PF00860 Permease family J6B58_01885 PF00576 HIUase/Transthyretin family J6B58_01915 PF11412 Disulphide bond corrector protein DsbC J6B58_01915 PF02683 Cytochrome C biogenesis protein transmembrane region J6B58_01920 PF07694 5TMR of 5TMR-LYT J6B58_01920 PF00990 Diguanylate cyclase, GGDEF domain J6B58_01925 PF07859 alpha/beta hydrolase fold J6B58_01935 PF03960 ArsC family J6B58_01940 PF03372 Endonuclease/Exonuclease/phosphatase family J6B58_01945 PF00156 Phosphoribosyl transferase domain J6B58_01950 PF07715 TonB-dependent Receptor Plug Domain J6B58_01950 PF00593 TonB dependent receptor J6B58_01960 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J6B58_01960 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J6B58_01965 PF03033 Glycosyltransferase family 28 N-terminal domain J6B58_01965 PF04101 Glycosyltransferase family 28 C-terminal domain J6B58_01970 PF01225 Mur ligase family, catalytic domain J6B58_01970 PF02875 Mur ligase family, glutamate ligase domain J6B58_01970 PF08245 Mur ligase middle domain J6B58_01975 PF07478 D-ala D-ala ligase C-terminus J6B58_01975 PF01820 D-ala D-ala ligase N-terminus J6B58_01980 PF03799 Cell division protein FtsQ J6B58_01980 PF08478 POTRA domain, FtsQ-type J6B58_01985 PF02491 SHS2 domain inserted in FTSA J6B58_01990 PF00091 Tubulin/FtsZ family, GTPase domain J6B58_01990 PF12327 FtsZ family, C-terminal domain J6B58_01995 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J6B58_02005 PF01551 Peptidase family M23 J6B58_02010 PF17831 Pyruvate dehydrogenase E1 component middle domain J6B58_02010 PF00456 Transketolase, thiamine diphosphate binding domain J6B58_02015 PF02817 e3 binding domain J6B58_02015 PF00364 Biotin-requiring enzyme J6B58_02015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6B58_02025 PF01169 Uncharacterized protein family UPF0016 J6B58_02030 PF00593 TonB dependent receptor J6B58_02030 PF07715 TonB-dependent Receptor Plug Domain J6B58_02035 PF01613 Flavin reductase like domain J6B58_02035 PF00258 Flavodoxin J6B58_02040 PF03692 Putative zinc- or iron-chelating domain J6B58_02045 PF00571 CBS domain J6B58_02045 PF00478 IMP dehydrogenase / GMP reductase domain J6B58_02050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6B58_02050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6B58_02050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6B58_02050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6B58_02055 PF01243 Pyridoxamine 5'-phosphate oxidase J6B58_02055 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J6B58_02060 PF01368 DHH family J6B58_02060 PF17768 RecJ OB domain J6B58_02060 PF02272 DHHA1 domain J6B58_02080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6B58_02085 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J6B58_02090 PF04452 RNA methyltransferase J6B58_02095 PF00924 Mechanosensitive ion channel J6B58_02105 PF16177 Acetyl-coenzyme A synthetase N-terminus J6B58_02105 PF00501 AMP-binding enzyme J6B58_02105 PF13193 AMP-binding enzyme C-terminal domain J6B58_02110 PF00857 Isochorismatase family J6B58_02115 PF01037 Lrp/AsnC ligand binding domain J6B58_02120 PF00296 Luciferase-like monooxygenase J6B58_02125 PF03358 NADPH-dependent FMN reductase J6B58_02130 PF00196 Bacterial regulatory proteins, luxR family J6B58_02130 PF00072 Response regulator receiver domain J6B58_02140 PF00672 HAMP domain J6B58_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_02140 PF00512 His Kinase A (phospho-acceptor) domain J6B58_02140 PF01627 Hpt domain J6B58_02140 PF00072 Response regulator receiver domain J6B58_02145 PF04341 Protein of unknown function, DUF485 J6B58_02150 PF00474 Sodium:solute symporter family J6B58_02160 PF02028 BCCT, betaine/carnitine/choline family transporter J6B58_02170 PF00990 Diguanylate cyclase, GGDEF domain J6B58_02180 PF17760 UvrA interaction domain J6B58_02180 PF17755 UvrA DNA-binding domain J6B58_02180 PF00005 ABC transporter J6B58_02185 PF00440 Bacterial regulatory proteins, tetR family J6B58_02185 PF16925 Tetracyclin repressor-like, C-terminal domain J6B58_02190 PF00107 Zinc-binding dehydrogenase J6B58_02190 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_02200 PF06942 GlpM protein J6B58_02205 PF08543 Phosphomethylpyrimidine kinase J6B58_02205 PF03070 TENA/THI-4/PQQC family J6B58_02205 PF02581 Thiamine monophosphate synthase J6B58_02215 PF07690 Major Facilitator Superfamily J6B58_02220 PF00436 Single-strand binding protein family J6B58_02230 PF03591 AzlC protein J6B58_02240 PF00324 Amino acid permease J6B58_02245 PF00155 Aminotransferase class I and II J6B58_02245 PF00392 Bacterial regulatory proteins, gntR family J6B58_02250 PF00202 Aminotransferase class-III J6B58_02255 PF00171 Aldehyde dehydrogenase family J6B58_02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_02265 PF00857 Isochorismatase family J6B58_02270 PF02678 Pirin J6B58_02270 PF05726 Pirin C-terminal cupin domain J6B58_02275 PF01593 Flavin containing amine oxidoreductase J6B58_02295 PF07690 Major Facilitator Superfamily J6B58_02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_02300 PF03466 LysR substrate binding domain J6B58_02320 PF00248 Aldo/keto reductase family J6B58_02325 PF02311 AraC-like ligand binding domain J6B58_02325 PF12833 Helix-turn-helix domain J6B58_02355 PF01638 HxlR-like helix-turn-helix J6B58_02360 PF02525 Flavodoxin-like fold J6B58_02385 PF02705 K+ potassium transporter J6B58_02410 PF00230 Major intrinsic protein J6B58_02425 PF00977 Histidine biosynthesis protein J6B58_02430 PF01636 Phosphotransferase enzyme family J6B58_02445 PF03992 Antibiotic biosynthesis monooxygenase J6B58_02460 PF00977 Histidine biosynthesis protein J6B58_02475 PF00117 Glutamine amidotransferase class-I J6B58_02480 PF00475 Imidazoleglycerol-phosphate dehydratase J6B58_02500 PF00583 Acetyltransferase (GNAT) family J6B58_02505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J6B58_02505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J6B58_02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_02515 PF00672 HAMP domain J6B58_02515 PF00512 His Kinase A (phospho-acceptor) domain J6B58_02520 PF00486 Transcriptional regulatory protein, C terminal J6B58_02520 PF00072 Response regulator receiver domain J6B58_02525 PF09371 Tex-like protein N-terminal domain J6B58_02525 PF16921 Tex protein YqgF-like domain J6B58_02525 PF00575 S1 RNA binding domain J6B58_02525 PF17674 HHH domain J6B58_02530 PF01740 STAS domain J6B58_02530 PF00916 Sulfate permease family J6B58_02535 PF00106 short chain dehydrogenase J6B58_02540 PF01053 Cys/Met metabolism PLP-dependent enzyme J6B58_02545 PF00005 ABC transporter J6B58_02545 PF12848 ABC transporter J6B58_02570 PF04191 Phospholipid methyltransferase J6B58_02590 PF00529 HlyD membrane-fusion protein of T1SS J6B58_02590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_02595 PF00873 AcrB/AcrD/AcrF family J6B58_02600 PF01545 Cation efflux family J6B58_02630 PF00324 Amino acid permease J6B58_02645 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6B58_02660 PF01795 MraW methylase family J6B58_02670 PF03717 Penicillin-binding Protein dimerisation domain J6B58_02670 PF00905 Penicillin binding protein transpeptidase domain J6B58_02675 PF08245 Mur ligase middle domain J6B58_02675 PF01225 Mur ligase family, catalytic domain J6B58_02675 PF02875 Mur ligase family, glutamate ligase domain J6B58_02680 PF02875 Mur ligase family, glutamate ligase domain J6B58_02680 PF01225 Mur ligase family, catalytic domain J6B58_02680 PF08245 Mur ligase middle domain J6B58_02685 PF00953 Glycosyl transferase family 4 J6B58_02695 PF13847 Methyltransferase domain J6B58_02700 PF00905 Penicillin binding protein transpeptidase domain J6B58_02700 PF00912 Transglycosylase J6B58_02700 PF17092 Penicillin-binding protein OB-like domain J6B58_02705 PF11104 Type IV pilus assembly protein PilM; J6B58_02710 PF05137 Fimbrial assembly protein (PilN) J6B58_02715 PF04350 Pilus assembly protein, PilO J6B58_02725 PF07660 Secretin and TonB N terminus short domain J6B58_02725 PF03958 Bacterial type II/III secretion system short domain J6B58_02725 PF00263 Bacterial type II and III secretion system protein J6B58_02725 PF11741 AMIN domain J6B58_02730 PF01202 Shikimate kinase J6B58_02735 PF01761 3-dehydroquinate synthase J6B58_02745 PF01493 GXGXG motif J6B58_02745 PF00310 Glutamine amidotransferases class-II J6B58_02745 PF01645 Conserved region in glutamate synthase J6B58_02745 PF04898 Glutamate synthase central domain J6B58_02750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6B58_02750 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_02760 PF04011 LemA family J6B58_02765 PF04536 TPM domain J6B58_02775 PF00114 Pilin (bacterial filament) J6B58_02775 PF07963 Prokaryotic N-terminal methylation motif J6B58_02780 PF11846 Virulence factor membrane-bound polymerase, C-terminal J6B58_02780 PF04932 O-Antigen ligase J6B58_02780 PF15864 Protein glycosylation ligase J6B58_02785 PF00210 Ferritin-like domain J6B58_02790 PF04324 BFD-like [2Fe-2S] binding domain J6B58_02795 PF01042 Endoribonuclease L-PSP J6B58_02800 PF13291 ACT domain J6B58_02800 PF02824 TGS domain J6B58_02800 PF04607 Region found in RelA / SpoT proteins J6B58_02810 PF01192 RNA polymerase Rpb6 J6B58_02815 PF00625 Guanylate kinase J6B58_02820 PF02401 LytB protein J6B58_02860 PF00886 Ribosomal protein S16 J6B58_02865 PF05239 PRC-barrel domain J6B58_02865 PF01782 RimM N-terminal domain J6B58_02870 PF01746 tRNA (Guanine-1)-methyltransferase J6B58_02875 PF01245 Ribosomal protein L19 J6B58_02880 PF00561 alpha/beta hydrolase fold J6B58_02885 PF03280 Proteobacterial lipase chaperone protein J6B58_02890 PF09157 Pseudouridine synthase II TruB, C-terminal J6B58_02890 PF16198 tRNA pseudouridylate synthase B C-terminal domain J6B58_02890 PF01509 TruB family pseudouridylate synthase (N terminal domain) J6B58_02895 PF01925 Sulfite exporter TauE/SafE J6B58_02905 PF00892 EamA-like transporter family J6B58_02910 PF00892 EamA-like transporter family J6B58_02915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6B58_02915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6B58_02920 PF02913 FAD linked oxidases, C-terminal domain J6B58_02920 PF01565 FAD binding domain J6B58_02930 PF03992 Antibiotic biosynthesis monooxygenase J6B58_02935 PF02525 Flavodoxin-like fold J6B58_02945 PF07690 Major Facilitator Superfamily J6B58_02950 PF12805 FUSC-like inner membrane protein yccS J6B58_02955 PF00080 Copper/zinc superoxide dismutase (SODC) J6B58_02960 PF01594 AI-2E family transporter J6B58_02965 PF13614 AAA domain J6B58_02985 PF08241 Methyltransferase domain J6B58_02995 PF00324 Amino acid permease J6B58_03000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J6B58_03000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J6B58_03005 PF00202 Aminotransferase class-III J6B58_03010 PF04958 Arginine N-succinyltransferase beta subunit J6B58_03015 PF00171 Aldehyde dehydrogenase family J6B58_03020 PF04996 Succinylarginine dihydrolase J6B58_03025 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J6B58_03040 PF05922 Peptidase inhibitor I9 J6B58_03040 PF00082 Subtilase family J6B58_03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_03055 PF03466 LysR substrate binding domain J6B58_03060 PF00892 EamA-like transporter family J6B58_03075 PF02092 Glycyl-tRNA synthetase beta subunit J6B58_03075 PF05746 DALR anticodon binding domain J6B58_03080 PF02091 Glycyl-tRNA synthetase alpha subunit J6B58_03105 PF00571 CBS domain J6B58_03110 PF04024 PspC domain J6B58_03120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_03120 PF12806 Acetyl-CoA dehydrogenase C-terminal like J6B58_03120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_03120 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_03135 PF01488 Shikimate / quinate 5-dehydrogenase J6B58_03135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J6B58_03135 PF08501 Shikimate dehydrogenase substrate binding domain J6B58_03140 PF01218 Coproporphyrinogen III oxidase J6B58_03145 PF00925 GTP cyclohydrolase II J6B58_03150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J6B58_03150 PF02779 Transketolase, pyrimidine binding domain J6B58_03150 PF02780 Transketolase, C-terminal domain J6B58_03155 PF00459 Inositol monophosphatase family J6B58_03160 PF03880 DbpA RNA binding domain J6B58_03160 PF00270 DEAD/DEAH box helicase J6B58_03160 PF12343 Cold shock protein DEAD box A J6B58_03160 PF00271 Helicase conserved C-terminal domain J6B58_03170 PF00005 ABC transporter J6B58_03175 PF02405 Permease MlaE J6B58_03185 PF05494 MlaC protein J6B58_03195 PF01544 CorA-like Mg2+ transporter protein J6B58_03200 PF03641 Possible lysine decarboxylase J6B58_03205 PF00293 NUDIX domain J6B58_03210 PF00156 Phosphoribosyl transferase domain J6B58_03215 PF00270 DEAD/DEAH box helicase J6B58_03215 PF17191 RecG wedge domain J6B58_03215 PF00271 Helicase conserved C-terminal domain J6B58_03230 PF01553 Acyltransferase J6B58_03240 PF00375 Sodium:dicarboxylate symporter family J6B58_03250 PF01926 50S ribosome-binding GTPase J6B58_03255 PF02082 Transcriptional regulator J6B58_03260 PF00175 Oxidoreductase NAD-binding domain J6B58_03260 PF00042 Globin J6B58_03260 PF00970 Oxidoreductase FAD-binding domain J6B58_03270 PF05872 Bacterial protein of unknown function (DUF853) J6B58_03275 PF01053 Cys/Met metabolism PLP-dependent enzyme J6B58_03280 PF00117 Glutamine amidotransferase class-I J6B58_03285 PF00338 Ribosomal protein S10p/S20e J6B58_03290 PF00297 Ribosomal protein L3 J6B58_03295 PF00573 Ribosomal protein L4/L1 family J6B58_03300 PF00276 Ribosomal protein L23 J6B58_03305 PF03947 Ribosomal Proteins L2, C-terminal domain J6B58_03305 PF00181 Ribosomal Proteins L2, RNA binding domain J6B58_03310 PF00203 Ribosomal protein S19 J6B58_03315 PF00237 Ribosomal protein L22p/L17e J6B58_03320 PF00189 Ribosomal protein S3, C-terminal domain J6B58_03320 PF07650 KH domain J6B58_03325 PF00252 Ribosomal protein L16p/L10e J6B58_03330 PF00831 Ribosomal L29 protein J6B58_03335 PF00366 Ribosomal protein S17 J6B58_03340 PF00238 Ribosomal protein L14p/L23e J6B58_03345 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J6B58_03345 PF00467 KOW motif J6B58_03350 PF00673 ribosomal L5P family C-terminus J6B58_03350 PF00281 Ribosomal protein L5 J6B58_03355 PF00253 Ribosomal protein S14p/S29e J6B58_03360 PF00410 Ribosomal protein S8 J6B58_03365 PF00347 Ribosomal protein L6 J6B58_03370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J6B58_03375 PF03719 Ribosomal protein S5, C-terminal domain J6B58_03375 PF00333 Ribosomal protein S5, N-terminal domain J6B58_03380 PF00327 Ribosomal protein L30p/L7e J6B58_03385 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J6B58_03390 PF00344 SecY translocase J6B58_03395 PF00444 Ribosomal protein L36 J6B58_03400 PF00416 Ribosomal protein S13/S18 J6B58_03405 PF00411 Ribosomal protein S11 J6B58_03410 PF00163 Ribosomal protein S4/S9 N-terminal domain J6B58_03410 PF01479 S4 domain J6B58_03415 PF01000 RNA polymerase Rpb3/RpoA insert domain J6B58_03415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J6B58_03415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J6B58_03420 PF01196 Ribosomal protein L17 J6B58_03425 PF00743 Flavin-binding monooxygenase-like J6B58_03430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_03430 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_03430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_03435 PF03937 Flavinator of succinate dehydrogenase J6B58_03465 PF09526 Probable metal-binding protein (DUF2387) J6B58_03470 PF01432 Peptidase family M3 J6B58_03475 PF00575 S1 RNA binding domain J6B58_03475 PF17876 Cold shock domain J6B58_03475 PF08461 Ribonuclease R winged-helix domain J6B58_03475 PF08206 Ribonuclease B OB domain J6B58_03475 PF00773 RNB domain J6B58_03525 PF01557 Fumarylacetoacetate (FAA) hydrolase family J6B58_03530 PF12833 Helix-turn-helix domain J6B58_03535 PF00892 EamA-like transporter family J6B58_03540 PF03631 Virulence factor BrkB J6B58_03545 PF03358 NADPH-dependent FMN reductase J6B58_03570 PF02130 Uncharacterized protein family UPF0054 J6B58_03575 PF02562 PhoH-like protein J6B58_03580 PF00919 Uncharacterized protein family UPF0004 J6B58_03580 PF04055 Radical SAM superfamily J6B58_03580 PF01938 TRAM domain J6B58_03585 PF01464 Transglycosylase SLT domain J6B58_03585 PF10145 Phage-related minor tail protein J6B58_03585 PF01551 Peptidase family M23 J6B58_03595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J6B58_03595 PF00056 lactate/malate dehydrogenase, NAD binding domain J6B58_03615 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J6B58_03620 PF01066 CDP-alcohol phosphatidyltransferase J6B58_03665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_03665 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_03665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_03670 PF17932 Tetracyclin repressor-like, C-terminal domain J6B58_03670 PF00440 Bacterial regulatory proteins, tetR family J6B58_03685 PF01039 Carboxyl transferase domain J6B58_03690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_03690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_03690 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_03700 PF02785 Biotin carboxylase C-terminal domain J6B58_03700 PF00289 Biotin carboxylase, N-terminal domain J6B58_03700 PF00364 Biotin-requiring enzyme J6B58_03700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6B58_03730 PF04386 Stringent starvation protein B J6B58_03735 PF13417 Glutathione S-transferase, N-terminal domain J6B58_03735 PF00043 Glutathione S-transferase, C-terminal domain J6B58_03740 PF00380 Ribosomal protein S9/S16 J6B58_03745 PF00572 Ribosomal protein L13 J6B58_03750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J6B58_03755 PF00398 Ribosomal RNA adenine dimethylase J6B58_03760 PF00149 Calcineurin-like phosphoesterase J6B58_03780 PF01926 50S ribosome-binding GTPase J6B58_03780 PF13167 GTP-binding GTPase N-terminal J6B58_03780 PF16360 GTP-binding GTPase Middle Region J6B58_03790 PF13091 PLD-like domain J6B58_03795 PF10518 TAT (twin-arginine translocation) pathway signal sequence J6B58_03795 PF00149 Calcineurin-like phosphoesterase J6B58_03800 PF00691 OmpA family J6B58_03800 PF01389 OmpA-like transmembrane domain J6B58_03805 PF17152 Periplasmic sensor domain J6B58_03805 PF00990 Diguanylate cyclase, GGDEF domain J6B58_03840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6B58_03840 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_03850 PF04273 Putative phosphatase (DUF442) J6B58_03850 PF00753 Metallo-beta-lactamase superfamily J6B58_03855 PF00561 alpha/beta hydrolase fold J6B58_03860 PF00085 Thioredoxin J6B58_03865 PF03061 Thioesterase superfamily J6B58_03875 PF04461 Protein of unknown function (DUF520) J6B58_03885 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J6B58_03885 PF01266 FAD dependent oxidoreductase J6B58_03895 PF03795 YCII-related domain J6B58_03900 PF04279 Intracellular septation protein A J6B58_03905 PF02811 PHP domain J6B58_03910 PF01062 Bestrophin, RFP-TM, chloride channel J6B58_03915 PF04002 RadC-like JAB domain J6B58_03920 PF04127 DNA / pantothenate metabolism flavoprotein J6B58_03920 PF02441 Flavoprotein J6B58_03925 PF07549 SecD/SecF GG Motif J6B58_03925 PF02355 Protein export membrane protein J6B58_03930 PF02355 Protein export membrane protein J6B58_03930 PF13721 SecD export protein N-terminal TM region J6B58_03930 PF07549 SecD/SecF GG Motif J6B58_03935 PF02699 Preprotein translocase subunit J6B58_03940 PF01702 Queuine tRNA-ribosyltransferase J6B58_03955 PF02547 Queuosine biosynthesis protein J6B58_04030 PF00717 Peptidase S24-like J6B58_04035 PF13438 Domain of unknown function (DUF4113) J6B58_04035 PF00817 impB/mucB/samB family J6B58_04035 PF11799 impB/mucB/samB family C-terminal domain J6B58_04035 PF11798 IMS family HHH motif J6B58_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_04185 PF07689 KaiB domain J6B58_04185 PF00512 His Kinase A (phospho-acceptor) domain J6B58_04190 PF03710 Glutamate-ammonia ligase adenylyltransferase J6B58_04190 PF08335 GlnD PII-uridylyltransferase J6B58_04195 PF01063 Amino-transferase class IV J6B58_04210 PF01522 Polysaccharide deacetylase J6B58_04215 PF00535 Glycosyl transferase family 2 J6B58_04220 PF00534 Glycosyl transferases group 1 J6B58_04220 PF13439 Glycosyltransferase Family 4 J6B58_04245 PF17102 Stealth protein CR3, conserved region 3 J6B58_04245 PF17101 Stealth protein CR1, conserved region 1 J6B58_04245 PF11380 Stealth protein CR2, conserved region 2 J6B58_04250 PF02938 GAD domain J6B58_04250 PF01336 OB-fold nucleic acid binding domain J6B58_04250 PF00152 tRNA synthetases class II (D, K and N) J6B58_04260 PF00593 TonB dependent receptor J6B58_04260 PF07715 TonB-dependent Receptor Plug Domain J6B58_04280 PF06146 Phosphate-starvation-inducible E J6B58_04285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_04285 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_04285 PF12806 Acetyl-CoA dehydrogenase C-terminal like J6B58_04285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_04290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_04290 PF12806 Acetyl-CoA dehydrogenase C-terminal like J6B58_04290 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_04290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_04300 PF00672 HAMP domain J6B58_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_04300 PF00512 His Kinase A (phospho-acceptor) domain J6B58_04305 PF00072 Response regulator receiver domain J6B58_04305 PF00486 Transcriptional regulatory protein, C terminal J6B58_04310 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J6B58_04330 PF01923 Cobalamin adenosyltransferase J6B58_04335 PF07715 TonB-dependent Receptor Plug Domain J6B58_04335 PF00593 TonB dependent receptor J6B58_04340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J6B58_04345 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_04370 PF00290 Tryptophan synthase alpha chain J6B58_04375 PF01039 Carboxyl transferase domain J6B58_04380 PF02875 Mur ligase family, glutamate ligase domain J6B58_04380 PF08245 Mur ligase middle domain J6B58_04395 PF00753 Metallo-beta-lactamase superfamily J6B58_04400 PF10417 C-terminal domain of 1-Cys peroxiredoxin J6B58_04400 PF00578 AhpC/TSA family J6B58_04405 PF02810 SEC-C motif J6B58_04405 PF07517 SecA DEAD-like domain J6B58_04405 PF01043 SecA preprotein cross-linking domain J6B58_04405 PF07516 SecA Wing and Scaffold domain J6B58_04415 PF07690 Major Facilitator Superfamily J6B58_04415 PF00083 Sugar (and other) transporter J6B58_04420 PF03006 Haemolysin-III related J6B58_04440 PF13673 Acetyltransferase (GNAT) domain J6B58_04455 PF00378 Enoyl-CoA hydratase/isomerase J6B58_04455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6B58_04455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6B58_04460 PF00108 Thiolase, N-terminal domain J6B58_04460 PF02803 Thiolase, C-terminal domain J6B58_04465 PF12833 Helix-turn-helix domain J6B58_04465 PF02311 AraC-like ligand binding domain J6B58_04470 PF02515 CoA-transferase family III J6B58_04475 PF04966 Carbohydrate-selective porin, OprB family J6B58_04480 PF01011 PQQ enzyme repeat J6B58_04485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6B58_04485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6B58_04495 PF00893 Small Multidrug Resistance protein J6B58_04505 PF02803 Thiolase, C-terminal domain J6B58_04505 PF00108 Thiolase, N-terminal domain J6B58_04515 PF13505 Outer membrane protein beta-barrel domain J6B58_04515 PF00691 OmpA family J6B58_04525 PF01139 tRNA-splicing ligase RtcB J6B58_04530 PF00324 Amino acid permease J6B58_04535 PF05175 Methyltransferase small domain J6B58_04535 PF08468 Methyltransferase small domain N-terminal J6B58_04540 PF00860 Permease family J6B58_04545 PF00679 Elongation factor G C-terminus J6B58_04545 PF00009 Elongation factor Tu GTP binding domain J6B58_04545 PF03144 Elongation factor Tu domain 2 J6B58_04550 PF01741 Large-conductance mechanosensitive channel, MscL J6B58_04565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J6B58_04565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J6B58_04565 PF06827 Zinc finger found in FPG and IleRS J6B58_04570 PF02245 Methylpurine-DNA glycosylase (MPG) J6B58_04575 PF07715 TonB-dependent Receptor Plug Domain J6B58_04575 PF00593 TonB dependent receptor J6B58_04580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6B58_04595 PF13098 Thioredoxin-like domain J6B58_04595 PF10411 Disulfide bond isomerase protein N-terminus J6B58_04600 PF01571 Aminomethyltransferase folate-binding domain J6B58_04610 PF04343 Protein of unknown function, DUF488 J6B58_04615 PF03831 PhnA domain J6B58_04615 PF08274 PhnA Zinc-Ribbon J6B58_04620 PF07411 Domain of unknown function (DUF1508) J6B58_04625 PF04073 Aminoacyl-tRNA editing domain J6B58_04625 PF03129 Anticodon binding domain J6B58_04625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6B58_04630 PF00873 AcrB/AcrD/AcrF family J6B58_04645 PF00072 Response regulator receiver domain J6B58_04650 PF00072 Response regulator receiver domain J6B58_04655 PF01584 CheW-like domain J6B58_04660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J6B58_04660 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J6B58_04665 PF01584 CheW-like domain J6B58_04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_04665 PF01627 Hpt domain J6B58_04665 PF00072 Response regulator receiver domain J6B58_04675 PF07687 Peptidase dimerisation domain J6B58_04675 PF01546 Peptidase family M20/M25/M40 J6B58_04680 PF08085 Entericidin EcnA/B family J6B58_04690 PF04304 Protein of unknown function (DUF454) J6B58_04695 PF03734 L,D-transpeptidase catalytic domain J6B58_04695 PF17969 L,D-transpeptidase C-terminal domain J6B58_04735 PF00175 Oxidoreductase NAD-binding domain J6B58_04735 PF00258 Flavodoxin J6B58_04735 PF00667 FAD binding domain J6B58_04745 PF12805 FUSC-like inner membrane protein yccS J6B58_04750 PF07690 Major Facilitator Superfamily J6B58_04755 PF00881 Nitroreductase family J6B58_04770 PF01235 Sodium:alanine symporter family J6B58_04775 PF01734 Patatin-like phospholipase J6B58_04780 PF13291 ACT domain J6B58_04780 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_04785 PF05992 SbmA/BacA-like family J6B58_04790 PF01431 Peptidase family M13 J6B58_04790 PF05649 Peptidase family M13 J6B58_04815 PF02934 GatB/GatE catalytic domain J6B58_04815 PF02637 GatB domain J6B58_04820 PF01425 Amidase J6B58_04825 PF02686 Glu-tRNAGln amidotransferase C subunit J6B58_04835 PF04085 rod shape-determining protein MreC J6B58_04840 PF04093 rod shape-determining protein MreD J6B58_04845 PF02545 Maf-like protein J6B58_04850 PF00575 S1 RNA binding domain J6B58_04850 PF10150 Ribonuclease E/G family J6B58_04860 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain J6B58_04860 PF06974 Protein of unknown function (DUF1298) J6B58_04865 PF01507 Phosphoadenosine phosphosulfate reductase family J6B58_04880 PF02525 Flavodoxin-like fold J6B58_04900 PF02673 Bacitracin resistance protein BacA J6B58_04905 PF06719 AraC-type transcriptional regulator N-terminus J6B58_04905 PF12833 Helix-turn-helix domain J6B58_04910 PF00109 Beta-ketoacyl synthase, N-terminal domain J6B58_04910 PF16197 Ketoacyl-synthetase C-terminal extension J6B58_04910 PF09277 Erythronolide synthase, docking J6B58_04910 PF08990 Erythronolide synthase docking J6B58_04910 PF00550 Phosphopantetheine attachment site J6B58_04910 PF02801 Beta-ketoacyl synthase, C-terminal domain J6B58_04910 PF08659 KR domain J6B58_04910 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_04910 PF14765 Polyketide synthase dehydratase J6B58_04910 PF00698 Acyl transferase domain J6B58_04915 PF01965 DJ-1/PfpI family J6B58_04925 PF00324 Amino acid permease J6B58_04930 PF04303 PrpF protein J6B58_04935 PF00348 Polyprenyl synthetase J6B58_04940 PF04237 YjbR J6B58_04945 PF01145 SPFH domain / Band 7 family J6B58_04955 PF01734 Patatin-like phospholipase J6B58_04975 PF08019 Phosphoethanolamine transferase EptA/EptB J6B58_04975 PF00884 Sulfatase J6B58_04980 PF00486 Transcriptional regulatory protein, C terminal J6B58_04980 PF00072 Response regulator receiver domain J6B58_04985 PF08521 Two-component sensor kinase N-terminal J6B58_04985 PF00512 His Kinase A (phospho-acceptor) domain J6B58_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_04995 PF00909 Ammonium Transporter Family J6B58_05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_05000 PF03466 LysR substrate binding domain J6B58_05020 PF10458 Valyl tRNA synthetase tRNA binding arm J6B58_05020 PF00133 tRNA synthetases class I (I, L, M and V) J6B58_05020 PF08264 Anticodon-binding domain of tRNA J6B58_05040 PF01906 Putative heavy-metal-binding J6B58_05045 PF01906 Putative heavy-metal-binding J6B58_05050 PF02321 Outer membrane efflux protein J6B58_05055 PF00873 AcrB/AcrD/AcrF family J6B58_05060 PF00529 HlyD membrane-fusion protein of T1SS J6B58_05060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_05065 PF01569 PAP2 superfamily J6B58_05075 PF00348 Polyprenyl synthetase J6B58_05085 PF00829 Ribosomal prokaryotic L21 protein J6B58_05090 PF01016 Ribosomal L27 protein J6B58_05095 PF03548 Outer membrane lipoprotein carrier protein LolA J6B58_05105 PF02403 Seryl-tRNA synthetase N-terminal domain J6B58_05105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6B58_05110 PF10414 Sirohaem synthase dimerisation region J6B58_05110 PF14824 Sirohaem biosynthesis protein central J6B58_05110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6B58_05115 PF00588 SpoU rRNA Methylase family J6B58_05120 PF01638 HxlR-like helix-turn-helix J6B58_05125 PF03358 NADPH-dependent FMN reductase J6B58_05130 PF13520 Amino acid permease J6B58_05135 PF00465 Iron-containing alcohol dehydrogenase J6B58_05145 PF03099 Biotin/lipoate A/B protein ligase family J6B58_05150 PF04359 Protein of unknown function (DUF493) J6B58_05155 PF04546 Sigma-70, non-essential region J6B58_05155 PF03979 Sigma-70 factor, region 1.1 J6B58_05155 PF00140 Sigma-70 factor, region 1.2 J6B58_05155 PF04542 Sigma-70 region 2 J6B58_05155 PF04539 Sigma-70 region 3 J6B58_05155 PF04545 Sigma-70, region 4 J6B58_05170 PF17773 UPF0176 acylphosphatase like domain J6B58_05170 PF00581 Rhodanese-like domain J6B58_05180 PF00285 Citrate synthase, C-terminal domain J6B58_05185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J6B58_05190 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J6B58_05195 PF00890 FAD binding domain J6B58_05195 PF02910 Fumarate reductase flavoprotein C-term J6B58_05200 PF13085 2Fe-2S iron-sulfur cluster binding domain J6B58_05215 PF16078 2-oxoglutarate dehydrogenase N-terminus J6B58_05215 PF00676 Dehydrogenase E1 component J6B58_05215 PF16870 2-oxoglutarate dehydrogenase C-terminal J6B58_05215 PF02779 Transketolase, pyrimidine binding domain J6B58_05220 PF02817 e3 binding domain J6B58_05220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6B58_05220 PF00364 Biotin-requiring enzyme J6B58_05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_05225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6B58_05230 PF08442 ATP-grasp domain J6B58_05230 PF00549 CoA-ligase J6B58_05235 PF02629 CoA binding domain J6B58_05235 PF00549 CoA-ligase J6B58_05240 PF00579 tRNA synthetases class I (W and Y) J6B58_05245 PF05661 Protein of unknown function (DUF808) J6B58_05250 PF04228 Putative neutral zinc metallopeptidase J6B58_05255 PF00999 Sodium/hydrogen exchanger family J6B58_05275 PF09587 Bacterial capsule synthesis protein PGA_cap J6B58_05285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6B58_05290 PF00582 Universal stress protein family J6B58_05295 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_05300 PF01042 Endoribonuclease L-PSP J6B58_05305 PF00440 Bacterial regulatory proteins, tetR family J6B58_05310 PF01272 Transcription elongation factor, GreA/GreB, C-term J6B58_05310 PF03449 Transcription elongation factor, N-terminal J6B58_05315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6B58_05315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J6B58_05315 PF02142 MGS-like domain J6B58_05320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J6B58_05320 PF00117 Glutamine amidotransferase class-I J6B58_05335 PF01985 CRS1 / YhbY (CRM) domain J6B58_05340 PF01728 FtsJ-like methyltransferase J6B58_05345 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_05345 PF17862 AAA+ lid domain J6B58_05345 PF06480 FtsH Extracellular J6B58_05345 PF01434 Peptidase family M41 J6B58_05350 PF00809 Pterin binding enzyme J6B58_05370 PF09423 PhoD-like phosphatase J6B58_05370 PF16655 PhoD-like phosphatase, N-terminal domain J6B58_05385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J6B58_05385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J6B58_05400 PF00083 Sugar (and other) transporter J6B58_05405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J6B58_05405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J6B58_05410 PF01266 FAD dependent oxidoreductase J6B58_05410 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J6B58_05415 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain J6B58_05415 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain J6B58_05420 PF00781 Diacylglycerol kinase catalytic domain J6B58_05425 PF00149 Calcineurin-like phosphoesterase J6B58_05435 PF00166 Chaperonin 10 Kd subunit J6B58_05440 PF00118 TCP-1/cpn60 chaperonin family J6B58_05445 PF01219 Prokaryotic diacylglycerol kinase J6B58_05455 PF03009 Glycerophosphoryl diester phosphodiesterase family J6B58_05460 PF00873 AcrB/AcrD/AcrF family J6B58_05470 PF01435 Peptidase family M48 J6B58_05475 PF01464 Transglycosylase SLT domain J6B58_05480 PF01171 PP-loop family J6B58_05490 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6B58_05490 PF01464 Transglycosylase SLT domain J6B58_05495 PF01272 Transcription elongation factor, GreA/GreB, C-term J6B58_05495 PF03449 Transcription elongation factor, N-terminal J6B58_05510 PF00501 AMP-binding enzyme J6B58_05510 PF13193 AMP-binding enzyme C-terminal domain J6B58_05510 PF00668 Condensation domain J6B58_05510 PF00975 Thioesterase domain J6B58_05510 PF00550 Phosphopantetheine attachment site J6B58_05520 PF09857 Putative toxin of bacterial toxin-antitoxin pair J6B58_05540 PF00881 Nitroreductase family J6B58_05555 PF02595 Glycerate kinase family J6B58_05560 PF00384 Molybdopterin oxidoreductase J6B58_05565 PF02634 FdhD/NarQ family J6B58_05570 PF06803 Protein of unknown function (DUF1232) J6B58_05575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6B58_05575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6B58_05575 PF11890 Domain of unknown function (DUF3410) J6B58_05580 PF00152 tRNA synthetases class II (D, K and N) J6B58_05590 PF18073 Rubredoxin metal binding domain J6B58_05595 PF00324 Amino acid permease J6B58_05605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J6B58_05605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J6B58_05610 PF01678 Diaminopimelate epimerase J6B58_05615 PF01810 LysE type translocator J6B58_05620 PF02899 Phage integrase, N-terminal SAM-like domain J6B58_05620 PF00589 Phage integrase family J6B58_05625 PF01012 Electron transfer flavoprotein domain J6B58_05630 PF01012 Electron transfer flavoprotein domain J6B58_05630 PF00766 Electron transfer flavoprotein FAD-binding domain J6B58_05635 PF03989 DNA gyrase C-terminal domain, beta-propeller J6B58_05635 PF00521 DNA gyrase/topoisomerase IV, subunit A J6B58_05650 PF00535 Glycosyl transferase family 2 J6B58_05670 PF13533 Biotin-lipoyl like J6B58_05680 PF00266 Aminotransferase class-V J6B58_05695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J6B58_05705 PF02687 FtsX-like permease family J6B58_05705 PF12704 MacB-like periplasmic core domain J6B58_05710 PF00005 ABC transporter J6B58_05715 PF03772 Competence protein J6B58_05715 PF13567 Domain of unknown function (DUF4131) J6B58_05715 PF00753 Metallo-beta-lactamase superfamily J6B58_05725 PF01343 Peptidase family S49 J6B58_05725 PF06965 Na+/H+ antiporter 1 J6B58_05730 PF12697 Alpha/beta hydrolase family J6B58_05735 PF00551 Formyl transferase J6B58_05740 PF00586 AIR synthase related protein, N-terminal domain J6B58_05740 PF02769 AIR synthase related protein, C-terminal domain J6B58_05745 PF01594 AI-2E family transporter J6B58_05750 PF08299 Bacterial dnaA protein helix-turn-helix J6B58_05750 PF11638 DnaA N-terminal domain J6B58_05750 PF00308 Bacterial dnaA protein J6B58_05780 PF00588 SpoU rRNA Methylase family J6B58_05780 PF08032 RNA 2'-O ribose methyltransferase substrate binding J6B58_05785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J6B58_05795 PF00691 OmpA family J6B58_05800 PF04052 TolB amino-terminal domain J6B58_05800 PF07676 WD40-like Beta Propeller Repeat J6B58_05810 PF02472 Biopolymer transport protein ExbD/TolR J6B58_05815 PF01618 MotA/TolQ/ExbB proton channel family J6B58_05820 PF03061 Thioesterase superfamily J6B58_05825 PF07687 Peptidase dimerisation domain J6B58_05825 PF01546 Peptidase family M20/M25/M40 J6B58_05830 PF17864 RuvB AAA lid domain J6B58_05830 PF05491 RuvB C-terminal winged helix domain J6B58_05830 PF05496 Holliday junction DNA helicase RuvB P-loop domain J6B58_05835 PF01330 RuvA N terminal domain J6B58_05835 PF07499 RuvA, C-terminal domain J6B58_05840 PF01966 HD domain J6B58_05845 PF02769 AIR synthase related protein, C-terminal domain J6B58_05845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J6B58_05845 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J6B58_05850 PF07690 Major Facilitator Superfamily J6B58_05855 PF01784 NIF3 (NGG1p interacting factor 3) J6B58_05860 PF00378 Enoyl-CoA hydratase/isomerase J6B58_05865 PF01467 Cytidylyltransferase-like J6B58_05865 PF00293 NUDIX domain J6B58_05875 PF00578 AhpC/TSA family J6B58_05890 PF06508 Queuosine biosynthesis protein QueC J6B58_05900 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_05900 PF14602 Hexapeptide repeat of succinyl-transferase J6B58_05900 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J6B58_05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_05910 PF03466 LysR substrate binding domain J6B58_05915 PF00005 ABC transporter J6B58_05915 PF12857 TOBE-like domain J6B58_05920 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_05925 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_05940 PF01063 Amino-transferase class IV J6B58_05945 PF02618 YceG-like family J6B58_05950 PF02223 Thymidylate kinase J6B58_05960 PF00890 FAD binding domain J6B58_05960 PF02910 Fumarate reductase flavoprotein C-term J6B58_05965 PF13180 PDZ domain J6B58_05975 PF13302 Acetyltransferase (GNAT) domain J6B58_05980 PF06421 GTP-binding protein LepA C-terminus J6B58_05980 PF00679 Elongation factor G C-terminus J6B58_05980 PF00009 Elongation factor Tu GTP binding domain J6B58_05980 PF03144 Elongation factor Tu domain 2 J6B58_05985 PF10502 Signal peptidase, peptidase S26 J6B58_05995 PF00035 Double-stranded RNA binding motif J6B58_05995 PF14622 Ribonuclease-III-like J6B58_06000 PF07650 KH domain J6B58_06000 PF01926 50S ribosome-binding GTPase J6B58_06010 PF11967 Recombination protein O N terminal J6B58_06010 PF02565 Recombination protein O C terminal J6B58_06015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J6B58_06020 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J6B58_06025 PF00106 short chain dehydrogenase J6B58_06055 PF00012 Hsp70 protein J6B58_06065 PF00155 Aminotransferase class I and II J6B58_06075 PF17151 Periplasmic sensor domain J6B58_06075 PF00990 Diguanylate cyclase, GGDEF domain J6B58_06085 PF00271 Helicase conserved C-terminal domain J6B58_06085 PF04851 Type III restriction enzyme, res subunit J6B58_06085 PF02151 UvrB/uvrC motif J6B58_06085 PF12344 Ultra-violet resistance protein B J6B58_06085 PF17757 UvrB interaction domain J6B58_06095 PF00892 EamA-like transporter family J6B58_06100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6B58_06100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6B58_06115 PF01018 GTP1/OBG J6B58_06115 PF01926 50S ribosome-binding GTPase J6B58_06120 PF01472 PUA domain J6B58_06120 PF00696 Amino acid kinase family J6B58_06130 PF07759 Protein of unknown function (DUF1615) J6B58_06135 PF01207 Dihydrouridine synthase (Dus) J6B58_06140 PF03060 Nitronate monooxygenase J6B58_06155 PF02350 UDP-N-acetylglucosamine 2-epimerase J6B58_06185 PF00875 DNA photolyase J6B58_06185 PF03441 FAD binding domain of DNA photolyase J6B58_06190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6B58_06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_06200 PF07943 Penicillin-binding protein 5, C-terminal domain J6B58_06200 PF00768 D-alanyl-D-alanine carboxypeptidase J6B58_06210 PF03971 Monomeric isocitrate dehydrogenase J6B58_06215 PF00849 RNA pseudouridylate synthase J6B58_06270 PF01381 Helix-turn-helix J6B58_06270 PF00717 Peptidase S24-like J6B58_06285 PF03374 Phage antirepressor protein KilAC domain J6B58_06285 PF09669 Phage regulatory protein Rha (Phage_pRha) J6B58_06465 PF00872 Transposase, Mutator family J6B58_06565 PF13356 Arm DNA-binding domain J6B58_06565 PF00589 Phage integrase family J6B58_06570 PF00180 Isocitrate/isopropylmalate dehydrogenase J6B58_06590 PF06779 Uncharacterised MFS-type transporter YbfB J6B58_06595 PF03466 LysR substrate binding domain J6B58_06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_06600 PF00375 Sodium:dicarboxylate symporter family J6B58_06605 PF02567 Phenazine biosynthesis-like protein J6B58_06610 PF00675 Insulinase (Peptidase family M16) J6B58_06610 PF05193 Peptidase M16 inactive domain J6B58_06635 PF02581 Thiamine monophosphate synthase J6B58_06640 PF00202 Aminotransferase class-III J6B58_06650 PF00849 RNA pseudouridylate synthase J6B58_06655 PF18337 RapA N-terminal Tudor like domain J6B58_06655 PF18339 RapA N-terminal Tudor like domain 1 J6B58_06655 PF00176 SNF2 family N-terminal domain J6B58_06655 PF12137 RNA polymerase recycling family C-terminal J6B58_06655 PF00271 Helicase conserved C-terminal domain J6B58_06665 PF00440 Bacterial regulatory proteins, tetR family J6B58_06670 PF00970 Oxidoreductase FAD-binding domain J6B58_06670 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_06670 PF00175 Oxidoreductase NAD-binding domain J6B58_06675 PF00487 Fatty acid desaturase J6B58_06680 PF02525 Flavodoxin-like fold J6B58_06695 PF00202 Aminotransferase class-III J6B58_06700 PF00282 Pyridoxal-dependent decarboxylase conserved domain J6B58_06705 PF00171 Aldehyde dehydrogenase family J6B58_06710 PF01037 Lrp/AsnC ligand binding domain J6B58_06715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6B58_06715 PF00205 Thiamine pyrophosphate enzyme, central domain J6B58_06715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6B58_06720 PF00324 Amino acid permease J6B58_06725 PF12849 PBP superfamily domain J6B58_06730 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_06735 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_06740 PF00005 ABC transporter J6B58_06745 PF08496 Peptidase family S49 N-terminal J6B58_06745 PF01343 Peptidase family S49 J6B58_06760 PF08328 Adenylosuccinate lyase C-terminal J6B58_06760 PF00206 Lyase J6B58_06765 PF04356 Protein of unknown function (DUF489) J6B58_06775 PF00293 NUDIX domain J6B58_06780 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_06785 PF00768 D-alanyl-D-alanine carboxypeptidase J6B58_06785 PF07943 Penicillin-binding protein 5, C-terminal domain J6B58_06800 PF01975 Survival protein SurE J6B58_06805 PF01476 LysM domain J6B58_06805 PF01551 Peptidase family M23 J6B58_06810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_06810 PF03466 LysR substrate binding domain J6B58_06815 PF13654 AAA domain J6B58_06815 PF05362 Lon protease (S16) C-terminal proteolytic domain J6B58_06820 PF07690 Major Facilitator Superfamily J6B58_06825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6B58_06830 PF13593 SBF-like CPA transporter family (DUF4137) J6B58_06835 PF01197 Ribosomal protein L31 J6B58_06840 PF12792 CSS motif domain associated with EAL J6B58_06840 PF00563 EAL domain J6B58_06850 PF04055 Radical SAM superfamily J6B58_06855 PF09285 Elongation factor P, C-terminal J6B58_06855 PF01132 Elongation factor P (EF-P) OB domain J6B58_06855 PF08207 Elongation factor P (EF-P) KOW-like domain J6B58_06860 PF02554 Carbon starvation protein CstA J6B58_06860 PF13722 5TM C-terminal transporter carbon starvation CstA J6B58_06865 PF04328 Selenoprotein, putative J6B58_06905 PF00857 Isochorismatase family J6B58_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_06910 PF03466 LysR substrate binding domain J6B58_06920 PF00743 Flavin-binding monooxygenase-like J6B58_06925 PF00561 alpha/beta hydrolase fold J6B58_06935 PF01370 NAD dependent epimerase/dehydratase family J6B58_06940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J6B58_06940 PF12833 Helix-turn-helix domain J6B58_06945 PF16884 N-terminal domain of oxidoreductase J6B58_06945 PF00107 Zinc-binding dehydrogenase J6B58_06950 PF00106 short chain dehydrogenase J6B58_06955 PF12852 Cupin J6B58_06955 PF12833 Helix-turn-helix domain J6B58_06975 PF17954 Quercetinase C-terminal cupin domain J6B58_06975 PF02678 Pirin J6B58_06980 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_06985 PF08348 YheO-like PAS domain J6B58_06985 PF13309 HTH domain J6B58_06995 PF00550 Phosphopantetheine attachment site J6B58_06995 PF00668 Condensation domain J6B58_06995 PF13193 AMP-binding enzyme C-terminal domain J6B58_06995 PF00501 AMP-binding enzyme J6B58_07000 PF00975 Thioesterase domain J6B58_07000 PF00550 Phosphopantetheine attachment site J6B58_07000 PF00668 Condensation domain J6B58_07000 PF13193 AMP-binding enzyme C-terminal domain J6B58_07000 PF00501 AMP-binding enzyme J6B58_07005 PF01032 FecCD transport family J6B58_07010 PF01032 FecCD transport family J6B58_07015 PF00005 ABC transporter J6B58_07020 PF01497 Periplasmic binding protein J6B58_07025 PF07715 TonB-dependent Receptor Plug Domain J6B58_07025 PF00593 TonB dependent receptor J6B58_07030 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J6B58_07035 PF00550 Phosphopantetheine attachment site J6B58_07035 PF00501 AMP-binding enzyme J6B58_07035 PF00668 Condensation domain J6B58_07040 PF00501 AMP-binding enzyme J6B58_07040 PF13193 AMP-binding enzyme C-terminal domain J6B58_07045 PF00857 Isochorismatase family J6B58_07045 PF00550 Phosphopantetheine attachment site J6B58_07050 PF00282 Pyridoxal-dependent decarboxylase conserved domain J6B58_07060 PF00005 ABC transporter J6B58_07065 PF00005 ABC transporter J6B58_07070 PF00975 Thioesterase domain J6B58_07080 PF00425 chorismate binding enzyme J6B58_07090 PF01208 Uroporphyrinogen decarboxylase (URO-D) J6B58_07095 PF05675 Protein of unknown function (DUF817) J6B58_07110 PF00144 Beta-lactamase J6B58_07115 PF01227 GTP cyclohydrolase I J6B58_07120 PF01799 [2Fe-2S] binding domain J6B58_07120 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_07125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J6B58_07125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J6B58_07140 PF00218 Indole-3-glycerol phosphate synthase J6B58_07145 PF02885 Glycosyl transferase family, helical bundle domain J6B58_07145 PF00591 Glycosyl transferase family, a/b domain J6B58_07150 PF07715 TonB-dependent Receptor Plug Domain J6B58_07150 PF00593 TonB dependent receptor J6B58_07155 PF11838 ERAP1-like C-terminal domain J6B58_07155 PF01433 Peptidase family M1 domain J6B58_07160 PF00117 Glutamine amidotransferase class-I J6B58_07170 PF00854 POT family J6B58_07175 PF00120 Glutamine synthetase, catalytic domain J6B58_07175 PF03951 Glutamine synthetase, beta-Grasp domain J6B58_07180 PF04345 Chorismate lyase J6B58_07185 PF01040 UbiA prenyltransferase family J6B58_07220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J6B58_07220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J6B58_07225 PF01784 NIF3 (NGG1p interacting factor 3) J6B58_07230 PF13180 PDZ domain J6B58_07235 PF01743 Poly A polymerase head domain J6B58_07235 PF12627 Probable RNA and SrmB- binding site of polymerase A J6B58_07240 PF00390 Malic enzyme, N-terminal domain J6B58_07240 PF03949 Malic enzyme, NAD binding domain J6B58_07240 PF01515 Phosphate acetyl/butaryl transferase J6B58_07245 PF00563 EAL domain J6B58_07245 PF00990 Diguanylate cyclase, GGDEF domain J6B58_07245 PF03707 Bacterial signalling protein N terminal repeat J6B58_07250 PF04452 RNA methyltransferase J6B58_07255 PF02219 Methylenetetrahydrofolate reductase J6B58_07260 PF05221 S-adenosyl-L-homocysteine hydrolase J6B58_07260 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J6B58_07275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_07275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_07275 PF09317 Domain of unknown function (DUF1974) J6B58_07280 PF04055 Radical SAM superfamily J6B58_07285 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_07285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6B58_07295 PF07690 Major Facilitator Superfamily J6B58_07305 PF00557 Metallopeptidase family M24 J6B58_07310 PF00318 Ribosomal protein S2 J6B58_07315 PF00889 Elongation factor TS J6B58_07325 PF12833 Helix-turn-helix domain J6B58_07345 PF05036 Sporulation related domain J6B58_07345 PF03330 Lytic transglycolase J6B58_07350 PF13406 Transglycosylase SLT domain J6B58_07355 PF01098 Cell cycle protein J6B58_07365 PF14489 QueF-like protein J6B58_07365 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J6B58_07370 PF01061 ABC-2 type transporter J6B58_07375 PF00005 ABC transporter J6B58_07400 PF00464 Serine hydroxymethyltransferase J6B58_07405 PF02321 Outer membrane efflux protein J6B58_07410 PF00873 AcrB/AcrD/AcrF family J6B58_07415 PF13533 Biotin-lipoyl like J6B58_07420 PF03466 LysR substrate binding domain J6B58_07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_07425 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6B58_07430 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_07435 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_07440 PF00005 ABC transporter J6B58_07445 PF00893 Small Multidrug Resistance protein J6B58_07450 PF00037 4Fe-4S binding domain J6B58_07455 PF16325 Peptidase family U32 C-terminal domain J6B58_07455 PF01136 Peptidase family U32 J6B58_07460 PF00392 Bacterial regulatory proteins, gntR family J6B58_07460 PF00155 Aminotransferase class I and II J6B58_07465 PF02567 Phenazine biosynthesis-like protein J6B58_07470 PF00970 Oxidoreductase FAD-binding domain J6B58_07470 PF00175 Oxidoreductase NAD-binding domain J6B58_07475 PF01980 tRNA-methyltransferase O J6B58_07475 PF18389 TrmO C-terminal domain J6B58_07485 PF00437 Type II/IV secretion system protein J6B58_07485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6B58_07495 PF00486 Transcriptional regulatory protein, C terminal J6B58_07495 PF00072 Response regulator receiver domain J6B58_07500 PF08521 Two-component sensor kinase N-terminal J6B58_07500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_07500 PF00512 His Kinase A (phospho-acceptor) domain J6B58_07510 PF00293 NUDIX domain J6B58_07520 PF00912 Transglycosylase J6B58_07520 PF00905 Penicillin binding protein transpeptidase domain J6B58_07520 PF14814 Bifunctional transglycosylase second domain J6B58_07525 PF01513 ATP-NAD kinase J6B58_07530 PF07023 Protein of unknown function (DUF1315) J6B58_07535 PF02885 Glycosyl transferase family, helical bundle domain J6B58_07535 PF00591 Glycosyl transferase family, a/b domain J6B58_07540 PF00375 Sodium:dicarboxylate symporter family J6B58_07545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_07545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_07545 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_07550 PF00756 Putative esterase J6B58_07555 PF01842 ACT domain J6B58_07555 PF01817 Chorismate mutase type II J6B58_07555 PF00800 Prephenate dehydratase J6B58_07560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J6B58_07570 PF07687 Peptidase dimerisation domain J6B58_07570 PF01546 Peptidase family M20/M25/M40 J6B58_07575 PF00753 Metallo-beta-lactamase superfamily J6B58_07585 PF03883 Peroxide stress protein YaaA J6B58_07595 PF05690 Thiazole biosynthesis protein ThiG J6B58_07605 PF04241 Protein of unknown function (DUF423) J6B58_07610 PF04542 Sigma-70 region 2 J6B58_07610 PF00140 Sigma-70 factor, region 1.2 J6B58_07610 PF04545 Sigma-70, region 4 J6B58_07620 PF00313 'Cold-shock' DNA-binding domain J6B58_07625 PF00270 DEAD/DEAH box helicase J6B58_07625 PF00271 Helicase conserved C-terminal domain J6B58_07635 PF00881 Nitroreductase family J6B58_07640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J6B58_07640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J6B58_07660 PF01180 Dihydroorotate dehydrogenase J6B58_07665 PF02674 Colicin V production protein J6B58_07670 PF00156 Phosphoribosyl transferase domain J6B58_07685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6B58_07685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6B58_07690 PF01435 Peptidase family M48 J6B58_07695 PF09424 Yqey-like protein J6B58_07700 PF01165 Ribosomal protein S21 J6B58_07705 PF00814 Glycoprotease family J6B58_07725 PF00069 Protein kinase domain J6B58_07750 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J6B58_07750 PF17287 POTRA domain J6B58_07750 PF08479 POTRA domain, ShlB-type J6B58_07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_07820 PF03466 LysR substrate binding domain J6B58_07825 PF00202 Aminotransferase class-III J6B58_07830 PF00171 Aldehyde dehydrogenase family J6B58_07835 PF00324 Amino acid permease J6B58_07865 PF04076 Bacterial OB fold (BOF) protein J6B58_07890 PF00561 alpha/beta hydrolase fold J6B58_07895 PF03616 Sodium/glutamate symporter J6B58_07905 PF07729 FCD domain J6B58_07905 PF00392 Bacterial regulatory proteins, gntR family J6B58_07955 PF08946 Osmosensory transporter coiled coil J6B58_07955 PF00083 Sugar (and other) transporter J6B58_07975 PF00155 Aminotransferase class I and II J6B58_07980 PF06826 Predicted Permease Membrane Region J6B58_07980 PF02080 TrkA-C domain J6B58_07995 PF04403 Paraquat-inducible protein A J6B58_08000 PF02470 MlaD protein J6B58_08010 PF00576 HIUase/Transthyretin family J6B58_08020 PF00486 Transcriptional regulatory protein, C terminal J6B58_08020 PF00072 Response regulator receiver domain J6B58_08025 PF00672 HAMP domain J6B58_08025 PF00512 His Kinase A (phospho-acceptor) domain J6B58_08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_08065 PF00512 His Kinase A (phospho-acceptor) domain J6B58_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_08065 PF08521 Two-component sensor kinase N-terminal J6B58_08070 PF00486 Transcriptional regulatory protein, C terminal J6B58_08070 PF00072 Response regulator receiver domain J6B58_08090 PF01177 Asp/Glu/Hydantoin racemase J6B58_08095 PF00892 EamA-like transporter family J6B58_08100 PF07995 Glucose / Sorbosone dehydrogenase J6B58_08120 PF00375 Sodium:dicarboxylate symporter family J6B58_08130 PF16123 Hydroxyacylglutathione hydrolase C-terminus J6B58_08130 PF00753 Metallo-beta-lactamase superfamily J6B58_08135 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_08140 PF09383 NIL domain J6B58_08140 PF00005 ABC transporter J6B58_08145 PF03180 NLPA lipoprotein J6B58_08150 PF02843 Phosphoribosylglycinamide synthetase, C domain J6B58_08150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J6B58_08150 PF02844 Phosphoribosylglycinamide synthetase, N domain J6B58_08155 PF01808 AICARFT/IMPCHase bienzyme J6B58_08155 PF02142 MGS-like domain J6B58_08160 PF02954 Bacterial regulatory protein, Fis family J6B58_08180 PF01134 Glucose inhibited division protein A J6B58_08180 PF13932 GidA associated domain J6B58_08190 PF14403 Circularly permuted ATP-grasp type 2 J6B58_08200 PF01841 Transglutaminase-like superfamily J6B58_08200 PF08379 Bacterial transglutaminase-like N-terminal region J6B58_08210 PF01168 Alanine racemase, N-terminal domain J6B58_08210 PF00842 Alanine racemase, C-terminal domain J6B58_08215 PF00772 DnaB-like helicase N terminal domain J6B58_08215 PF03796 DnaB-like helicase C terminal domain J6B58_08220 PF03948 Ribosomal protein L9, C-terminal domain J6B58_08220 PF01281 Ribosomal protein L9, N-terminal domain J6B58_08225 PF01084 Ribosomal protein S18 J6B58_08230 PF01250 Ribosomal protein S6 J6B58_08235 PF01040 UbiA prenyltransferase family J6B58_08240 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J6B58_08245 PF00510 Cytochrome c oxidase subunit III J6B58_08250 PF00115 Cytochrome C and Quinol oxidase polypeptide I J6B58_08255 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J6B58_08255 PF06481 COX Aromatic Rich Motif J6B58_08265 PF00391 PEP-utilising enzyme, mobile domain J6B58_08265 PF02896 PEP-utilising enzyme, TIM barrel domain J6B58_08265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J6B58_08270 PF03618 Kinase/pyrophosphorylase J6B58_08280 PF14883 Hypothetical glycosyl hydrolase family 13 J6B58_08280 PF01522 Polysaccharide deacetylase J6B58_08285 PF00535 Glycosyl transferase family 2 J6B58_08290 PF13994 PgaD-like protein J6B58_08300 PF00296 Luciferase-like monooxygenase J6B58_08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_08315 PF03466 LysR substrate binding domain J6B58_08325 PF03462 PCRF domain J6B58_08325 PF00472 RF-1 domain J6B58_08330 PF17827 PrmC N-terminal domain J6B58_08330 PF13847 Methyltransferase domain J6B58_08335 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_08340 PF09084 NMT1/THI5 like J6B58_08345 PF12833 Helix-turn-helix domain J6B58_08350 PF00106 short chain dehydrogenase J6B58_08355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_08355 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_08355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_08360 PF00501 AMP-binding enzyme J6B58_08360 PF13193 AMP-binding enzyme C-terminal domain J6B58_08365 PF01613 Flavin reductase like domain J6B58_08370 PF00899 ThiF family J6B58_08375 PF03109 ABC1 family J6B58_08390 PF03814 Potassium-transporting ATPase A subunit J6B58_08400 PF02669 K+-transporting ATPase, c chain J6B58_08405 PF13493 Domain of unknown function (DUF4118) J6B58_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_08405 PF00512 His Kinase A (phospho-acceptor) domain J6B58_08405 PF02702 Osmosensitive K+ channel His kinase sensor domain J6B58_08410 PF00072 Response regulator receiver domain J6B58_08410 PF00486 Transcriptional regulatory protein, C terminal J6B58_08415 PF00120 Glutamine synthetase, catalytic domain J6B58_08425 PF03232 Ubiquinone biosynthesis protein COQ7 J6B58_08430 PF07690 Major Facilitator Superfamily J6B58_08435 PF17243 POTRA domain TamA domain 1 J6B58_08435 PF01103 Surface antigen J6B58_08435 PF07244 Surface antigen variable number repeat J6B58_08450 PF06434 Aconitate hydratase 2 N-terminus J6B58_08450 PF00330 Aconitase family (aconitate hydratase) J6B58_08450 PF11791 Aconitate B N-terminal domain J6B58_08460 PF00520 Ion transport protein J6B58_08460 PF00027 Cyclic nucleotide-binding domain J6B58_08465 PF07690 Major Facilitator Superfamily J6B58_08480 PF03466 LysR substrate binding domain J6B58_08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_08485 PF04284 Protein of unknown function (DUF441) J6B58_08495 PF01479 S4 domain J6B58_08495 PF00849 RNA pseudouridylate synthase J6B58_08510 PF01479 S4 domain J6B58_08510 PF00849 RNA pseudouridylate synthase J6B58_08515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J6B58_08520 PF01119 DNA mismatch repair protein, C-terminal domain J6B58_08520 PF08676 MutL C terminal dimerisation domain J6B58_08530 PF17209 Hfq protein J6B58_08540 PF00881 Nitroreductase family J6B58_08550 PF00149 Calcineurin-like phosphoesterase J6B58_08555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J6B58_08560 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6B58_08560 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J6B58_08565 PF02540 NAD synthase J6B58_08565 PF00958 GMP synthase C terminal domain J6B58_08565 PF00117 Glutamine amidotransferase class-I J6B58_08570 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J6B58_08575 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J6B58_08580 PF13520 Amino acid permease J6B58_08585 PF00171 Aldehyde dehydrogenase family J6B58_08600 PF00465 Iron-containing alcohol dehydrogenase J6B58_08605 PF05970 PIF1-like helicase J6B58_08605 PF14493 Helix-turn-helix domain J6B58_08615 PF02110 Hydroxyethylthiazole kinase family J6B58_08630 PF11940 Domain of unknown function (DUF3458) Ig-like fold J6B58_08630 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J6B58_08630 PF01433 Peptidase family M1 domain J6B58_08645 PF13953 PapC C-terminal domain J6B58_08645 PF13954 PapC N-terminal domain J6B58_08645 PF00577 Outer membrane usher protein J6B58_08660 PF00106 short chain dehydrogenase J6B58_08670 PF01817 Chorismate mutase type II J6B58_08675 PF01037 Lrp/AsnC ligand binding domain J6B58_08685 PF00440 Bacterial regulatory proteins, tetR family J6B58_08690 PF07715 TonB-dependent Receptor Plug Domain J6B58_08690 PF00593 TonB dependent receptor J6B58_08695 PF00924 Mechanosensitive ion channel J6B58_08725 PF00593 TonB dependent receptor J6B58_08725 PF07715 TonB-dependent Receptor Plug Domain J6B58_08745 PF00005 ABC transporter J6B58_08745 PF12848 ABC transporter J6B58_08750 PF00582 Universal stress protein family J6B58_08775 PF00689 Cation transporting ATPase, C-terminus J6B58_08775 PF00690 Cation transporter/ATPase, N-terminus J6B58_08780 PF02308 MgtC family J6B58_08785 PF03594 Benzoate membrane transport protein J6B58_08790 PF01037 Lrp/AsnC ligand binding domain J6B58_08795 PF01810 LysE type translocator J6B58_08800 PF00923 Transaldolase/Fructose-6-phosphate aldolase J6B58_08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_08805 PF03466 LysR substrate binding domain J6B58_08815 PF02803 Thiolase, C-terminal domain J6B58_08815 PF00108 Thiolase, N-terminal domain J6B58_08825 PF01575 MaoC like domain J6B58_08830 PF00144 Beta-lactamase J6B58_08840 PF07690 Major Facilitator Superfamily J6B58_08845 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J6B58_08845 PF12169 DNA polymerase III subunits gamma and tau domain III J6B58_08845 PF12170 DNA polymerase III tau subunit V interacting with alpha J6B58_08855 PF03061 Thioesterase superfamily J6B58_08860 PF00465 Iron-containing alcohol dehydrogenase J6B58_08870 PF01451 Low molecular weight phosphotyrosine protein phosphatase J6B58_08875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J6B58_08875 PF01565 FAD binding domain J6B58_08900 PF01645 Conserved region in glutamate synthase J6B58_08985 PF01381 Helix-turn-helix J6B58_09175 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system J6B58_09185 PF01551 Peptidase family M23 J6B58_09185 PF01464 Transglycosylase SLT domain J6B58_09185 PF10145 Phage-related minor tail protein J6B58_09225 PF00182 Chitinase class I J6B58_09235 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_09235 PF00107 Zinc-binding dehydrogenase J6B58_09235 PF13823 Alcohol dehydrogenase GroES-associated J6B58_09240 PF13340 Putative transposase of IS4/5 family (DUF4096) J6B58_09245 PF00817 impB/mucB/samB family J6B58_09245 PF11799 impB/mucB/samB family C-terminal domain J6B58_09245 PF13438 Domain of unknown function (DUF4113) J6B58_09250 PF00717 Peptidase S24-like J6B58_09275 PF12832 MFS_1 like family J6B58_09285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6B58_09285 PF00289 Biotin carboxylase, N-terminal domain J6B58_09285 PF02785 Biotin carboxylase C-terminal domain J6B58_09290 PF00364 Biotin-requiring enzyme J6B58_09295 PF01220 Dehydroquinase class II J6B58_09300 PF11799 impB/mucB/samB family C-terminal domain J6B58_09300 PF00817 impB/mucB/samB family J6B58_09300 PF13438 Domain of unknown function (DUF4113) J6B58_09310 PF00005 ABC transporter J6B58_09315 PF00486 Transcriptional regulatory protein, C terminal J6B58_09315 PF00072 Response regulator receiver domain J6B58_09325 PF04324 BFD-like [2Fe-2S] binding domain J6B58_09325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6B58_09325 PF18267 Rubredoxin NAD+ reductase C-terminal domain J6B58_09325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6B58_09325 PF13806 Rieske-like [2Fe-2S] domain J6B58_09325 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_09330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J6B58_09330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J6B58_09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_09330 PF18267 Rubredoxin NAD+ reductase C-terminal domain J6B58_09330 PF04324 BFD-like [2Fe-2S] binding domain J6B58_09335 PF04324 BFD-like [2Fe-2S] binding domain J6B58_09335 PF00384 Molybdopterin oxidoreductase J6B58_09335 PF01568 Molydopterin dinucleotide binding domain J6B58_09335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6B58_09340 PF12804 MobA-like NTP transferase domain J6B58_09345 PF01568 Molydopterin dinucleotide binding domain J6B58_09345 PF00384 Molybdopterin oxidoreductase J6B58_09345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6B58_09350 PF04055 Radical SAM superfamily J6B58_09350 PF06463 Molybdenum Cofactor Synthesis C J6B58_09360 PF02391 MoaE protein J6B58_09365 PF01967 MoaC family J6B58_09365 PF00994 Probable molybdopterin binding domain J6B58_09370 PF00994 Probable molybdopterin binding domain J6B58_09370 PF03454 MoeA C-terminal region (domain IV) J6B58_09370 PF03453 MoeA N-terminal region (domain I and II) J6B58_09375 PF01638 HxlR-like helix-turn-helix J6B58_09380 PF00155 Aminotransferase class I and II J6B58_09380 PF00392 Bacterial regulatory proteins, gntR family J6B58_09385 PF00892 EamA-like transporter family J6B58_09405 PF02635 DsrE/DsrF-like family J6B58_09410 PF16363 GDP-mannose 4,6 dehydratase J6B58_09415 PF00206 Lyase J6B58_09415 PF10415 Fumarase C C-terminus J6B58_09435 PF01266 FAD dependent oxidoreductase J6B58_09445 PF02542 YgbB family J6B58_09455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6B58_09455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6B58_09460 PF00440 Bacterial regulatory proteins, tetR family J6B58_09465 PF00158 Sigma-54 interaction domain J6B58_09465 PF02954 Bacterial regulatory protein, Fis family J6B58_09465 PF00072 Response regulator receiver domain J6B58_09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_09470 PF00512 His Kinase A (phospho-acceptor) domain J6B58_09470 PF00989 PAS fold J6B58_09480 PF00919 Uncharacterized protein family UPF0004 J6B58_09480 PF18693 TRAM domain J6B58_09480 PF04055 Radical SAM superfamily J6B58_09485 PF00696 Amino acid kinase family J6B58_09490 PF01765 Ribosome recycling factor J6B58_09495 PF01255 Putative undecaprenyl diphosphate synthase J6B58_09505 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J6B58_09505 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J6B58_09505 PF13288 DXP reductoisomerase C-terminal domain J6B58_09510 PF02163 Peptidase family M50 J6B58_09510 PF17820 PDZ domain J6B58_09510 PF13180 PDZ domain J6B58_09515 PF01103 Surface antigen J6B58_09515 PF07244 Surface antigen variable number repeat J6B58_09525 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_09525 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J6B58_09530 PF07977 FabA-like domain J6B58_09535 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_09535 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J6B58_09550 PF02631 RecX family J6B58_09555 PF00154 recA bacterial DNA recombination protein J6B58_09560 PF01479 S4 domain J6B58_09565 PF13419 Haloacid dehalogenase-like hydrolase J6B58_09590 PF01037 Lrp/AsnC ligand binding domain J6B58_09595 PF00266 Aminotransferase class-V J6B58_09600 PF00324 Amino acid permease J6B58_09610 PF05922 Peptidase inhibitor I9 J6B58_09610 PF00082 Subtilase family J6B58_09615 PF01740 STAS domain J6B58_09615 PF00916 Sulfate permease family J6B58_09620 PF02586 SOS response associated peptidase (SRAP) J6B58_09625 PF07995 Glucose / Sorbosone dehydrogenase J6B58_09635 PF00563 EAL domain J6B58_09635 PF03707 Bacterial signalling protein N terminal repeat J6B58_09635 PF00990 Diguanylate cyclase, GGDEF domain J6B58_09655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J6B58_09655 PF02378 Phosphotransferase system, EIIC J6B58_09660 PF00294 pfkB family carbohydrate kinase J6B58_09665 PF05524 PEP-utilising enzyme, N-terminal J6B58_09665 PF00391 PEP-utilising enzyme, mobile domain J6B58_09665 PF02896 PEP-utilising enzyme, TIM barrel domain J6B58_09665 PF00381 PTS HPr component phosphorylation site J6B58_09665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J6B58_09690 PF05525 Branched-chain amino acid transport protein J6B58_09695 PF00557 Metallopeptidase family M24 J6B58_09700 PF03466 LysR substrate binding domain J6B58_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_09710 PF00462 Glutaredoxin J6B58_09715 PF00202 Aminotransferase class-III J6B58_09720 PF00478 IMP dehydrogenase / GMP reductase domain J6B58_09720 PF00571 CBS domain J6B58_09745 PF00448 SRP54-type protein, GTPase domain J6B58_09745 PF02881 SRP54-type protein, helical bundle domain J6B58_09755 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J6B58_09770 PF08173 Membrane bound YbgT-like protein J6B58_09775 PF02322 Cytochrome bd terminal oxidase subunit II J6B58_09780 PF01654 Cytochrome bd terminal oxidase subunit I J6B58_09790 PF07290 Protein of unknown function (DUF1449) J6B58_09800 PF00294 pfkB family carbohydrate kinase J6B58_09805 PF07715 TonB-dependent Receptor Plug Domain J6B58_09805 PF00593 TonB dependent receptor J6B58_09810 PF08367 Peptidase M16C associated J6B58_09810 PF00675 Insulinase (Peptidase family M16) J6B58_09810 PF05193 Peptidase M16 inactive domain J6B58_09815 PF02253 Phospholipase A1 J6B58_09820 PF02386 Cation transport protein J6B58_09825 PF02254 TrkA-N domain J6B58_09825 PF02080 TrkA-C domain J6B58_09830 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_09830 PF00585 C-terminal regulatory domain of Threonine dehydratase J6B58_09835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J6B58_09850 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6B58_09850 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6B58_09860 PF02617 ATP-dependent Clp protease adaptor protein ClpS J6B58_09865 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_09865 PF07724 AAA domain (Cdc48 subfamily) J6B58_09865 PF17871 AAA lid domain J6B58_09865 PF02861 Clp amino terminal domain, pathogenicity island component J6B58_09865 PF10431 C-terminal, D2-small domain, of ClpB protein J6B58_09870 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J6B58_09875 PF00793 DAHP synthetase I family J6B58_09890 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_09890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6B58_09920 PF06418 CTP synthase N-terminus J6B58_09920 PF00117 Glutamine amidotransferase class-I J6B58_09925 PF00793 DAHP synthetase I family J6B58_09930 PF00113 Enolase, C-terminal TIM barrel domain J6B58_09930 PF03952 Enolase, N-terminal domain J6B58_09935 PF04239 Protein of unknown function (DUF421) J6B58_09940 PF04977 Septum formation initiator J6B58_09945 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J6B58_09950 PF01144 Coenzyme A transferase J6B58_09955 PF01144 Coenzyme A transferase J6B58_09960 PF00108 Thiolase, N-terminal domain J6B58_09960 PF02803 Thiolase, C-terminal domain J6B58_09965 PF10397 Adenylosuccinate lyase C-terminus J6B58_09965 PF00206 Lyase J6B58_09970 PF00561 alpha/beta hydrolase fold J6B58_09975 PF07690 Major Facilitator Superfamily J6B58_09980 PF02627 Carboxymuconolactone decarboxylase family J6B58_09985 PF00775 Dioxygenase J6B58_09985 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J6B58_09990 PF00775 Dioxygenase J6B58_09995 PF01487 Type I 3-dehydroquinase J6B58_10000 PF05048 Periplasmic copper-binding protein (NosD) J6B58_10005 PF04966 Carbohydrate-selective porin, OprB family J6B58_10010 PF01011 PQQ enzyme repeat J6B58_10010 PF13360 PQQ-like domain J6B58_10020 PF04143 Sulphur transport J6B58_10030 PF00753 Metallo-beta-lactamase superfamily J6B58_10035 PF09339 IclR helix-turn-helix domain J6B58_10035 PF01614 Bacterial transcriptional regulator J6B58_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_10040 PF03466 LysR substrate binding domain J6B58_10045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_10045 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_10045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_10060 PF00106 short chain dehydrogenase J6B58_10070 PF07690 Major Facilitator Superfamily J6B58_10080 PF01425 Amidase J6B58_10085 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J6B58_10100 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J6B58_10100 PF00355 Rieske [2Fe-2S] domain J6B58_10115 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_10115 PF00175 Oxidoreductase NAD-binding domain J6B58_10120 PF01613 Flavin reductase like domain J6B58_10125 PF02311 AraC-like ligand binding domain J6B58_10125 PF12833 Helix-turn-helix domain J6B58_10130 PF01179 Copper amine oxidase, enzyme domain J6B58_10130 PF07833 Copper amine oxidase N-terminal domain J6B58_10130 PF02727 Copper amine oxidase, N2 domain J6B58_10130 PF02728 Copper amine oxidase, N3 domain J6B58_10140 PF00171 Aldehyde dehydrogenase family J6B58_10145 PF01804 Penicillin amidase J6B58_10150 PF12146 Serine aminopeptidase, S33 J6B58_10155 PF02803 Thiolase, C-terminal domain J6B58_10155 PF00108 Thiolase, N-terminal domain J6B58_10160 PF01144 Coenzyme A transferase J6B58_10165 PF01144 Coenzyme A transferase J6B58_10170 PF04444 Catechol dioxygenase N terminus J6B58_10170 PF00775 Dioxygenase J6B58_10175 PF02426 Muconolactone delta-isomerase J6B58_10180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J6B58_10180 PF13378 Enolase C-terminal domain-like J6B58_10185 PF03466 LysR substrate binding domain J6B58_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_10195 PF00392 Bacterial regulatory proteins, gntR family J6B58_10195 PF07729 FCD domain J6B58_10200 PF00920 Dehydratase family J6B58_10205 PF07690 Major Facilitator Superfamily J6B58_10215 PF00171 Aldehyde dehydrogenase family J6B58_10225 PF00561 alpha/beta hydrolase fold J6B58_10230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6B58_10230 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_10240 PF01872 RibD C-terminal domain J6B58_10250 PF00376 MerR family regulatory protein J6B58_10250 PF09278 MerR, DNA binding J6B58_10260 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_10270 PF12706 Beta-lactamase superfamily domain J6B58_10275 PF08359 YsiA-like protein, C-terminal region J6B58_10275 PF00440 Bacterial regulatory proteins, tetR family J6B58_10280 PF03466 LysR substrate binding domain J6B58_10280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_10295 PF00106 short chain dehydrogenase J6B58_10300 PF01575 MaoC like domain J6B58_10305 PF12806 Acetyl-CoA dehydrogenase C-terminal like J6B58_10305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_10305 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_10305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_10315 PF00501 AMP-binding enzyme J6B58_10315 PF13193 AMP-binding enzyme C-terminal domain J6B58_10385 PF07690 Major Facilitator Superfamily J6B58_10390 PF04909 Amidohydrolase J6B58_10400 PF07702 UTRA domain J6B58_10400 PF00392 Bacterial regulatory proteins, gntR family J6B58_10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_10425 PF03466 LysR substrate binding domain J6B58_10450 PF07690 Major Facilitator Superfamily J6B58_10455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J6B58_10455 PF01842 ACT domain J6B58_10455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J6B58_10460 PF03737 Aldolase/RraA J6B58_10490 PF00529 HlyD membrane-fusion protein of T1SS J6B58_10490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_10505 PF00171 Aldehyde dehydrogenase family J6B58_10510 PF00920 Dehydratase family J6B58_10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_10520 PF03466 LysR substrate binding domain J6B58_10525 PF01370 NAD dependent epimerase/dehydratase family J6B58_10530 PF07690 Major Facilitator Superfamily J6B58_10535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6B58_10535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6B58_10540 PF12833 Helix-turn-helix domain J6B58_10540 PF06719 AraC-type transcriptional regulator N-terminus J6B58_10555 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_10555 PF00107 Zinc-binding dehydrogenase J6B58_10565 PF01032 FecCD transport family J6B58_10570 PF00005 ABC transporter J6B58_10590 PF14572 Phosphoribosyl synthetase-associated domain J6B58_10590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J6B58_10595 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J6B58_10610 PF13533 Biotin-lipoyl like J6B58_10615 PF07690 Major Facilitator Superfamily J6B58_10640 PF01975 Survival protein SurE J6B58_10650 PF02824 TGS domain J6B58_10650 PF04607 Region found in RelA / SpoT proteins J6B58_10650 PF13291 ACT domain J6B58_10675 PF13361 UvrD-like helicase C-terminal domain J6B58_10675 PF00580 UvrD/REP helicase N-terminal domain J6B58_10680 PF13673 Acetyltransferase (GNAT) domain J6B58_10695 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J6B58_10715 PF12146 Serine aminopeptidase, S33 J6B58_10720 PF02311 AraC-like ligand binding domain J6B58_10720 PF12833 Helix-turn-helix domain J6B58_10730 PF16527 Two-component sensor protein CpxA, periplasmic domain J6B58_10730 PF00672 HAMP domain J6B58_10730 PF00512 His Kinase A (phospho-acceptor) domain J6B58_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_10735 PF00486 Transcriptional regulatory protein, C terminal J6B58_10735 PF00072 Response regulator receiver domain J6B58_10740 PF00529 HlyD membrane-fusion protein of T1SS J6B58_10740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_10745 PF00873 AcrB/AcrD/AcrF family J6B58_10750 PF17760 UvrA interaction domain J6B58_10750 PF00005 ABC transporter J6B58_10750 PF17755 UvrA DNA-binding domain J6B58_10820 PF16970 Type-1 fimbrial protein, A J6B58_10825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J6B58_10825 PF02753 Pili assembly chaperone PapD, C-terminal domain J6B58_10830 PF13953 PapC C-terminal domain J6B58_10830 PF13954 PapC N-terminal domain J6B58_10830 PF00577 Outer membrane usher protein J6B58_10835 PF00419 Fimbrial protein J6B58_10845 PF00107 Zinc-binding dehydrogenase J6B58_10845 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_10855 PF00199 Catalase J6B58_10870 PF13091 PLD-like domain J6B58_10890 PF01244 Membrane dipeptidase (Peptidase family M19) J6B58_10895 PF13186 Iron-sulfur cluster-binding domain J6B58_10895 PF04055 Radical SAM superfamily J6B58_10900 PF05402 Coenzyme PQQ synthesis protein D (PqqD) J6B58_10905 PF03070 TENA/THI-4/PQQC family J6B58_10910 PF12706 Beta-lactamase superfamily domain J6B58_10915 PF08042 PqqA family J6B58_10920 PF17941 Polyphosphate kinase C-terminal domain 1 J6B58_10920 PF13089 Polyphosphate kinase N-terminal domain J6B58_10920 PF02503 Polyphosphate kinase middle domain J6B58_10920 PF13090 Polyphosphate kinase C-terminal domain 2 J6B58_10925 PF00149 Calcineurin-like phosphoesterase J6B58_10935 PF00550 Phosphopantetheine attachment site J6B58_10935 PF00857 Isochorismatase family J6B58_10940 PF00106 short chain dehydrogenase J6B58_10945 PF00005 ABC transporter J6B58_10945 PF03459 TOBE domain J6B58_10950 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_10960 PF03459 TOBE domain J6B58_10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_10965 PF00355 Rieske [2Fe-2S] domain J6B58_10965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J6B58_10970 PF00866 Ring hydroxylating beta subunit J6B58_10975 PF00175 Oxidoreductase NAD-binding domain J6B58_10975 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_10975 PF00970 Oxidoreductase FAD-binding domain J6B58_10980 PF12833 Helix-turn-helix domain J6B58_10980 PF14525 AraC-binding-like domain J6B58_10990 PF01613 Flavin reductase like domain J6B58_11005 PF01738 Dienelactone hydrolase family J6B58_11010 PF07690 Major Facilitator Superfamily J6B58_11015 PF06719 AraC-type transcriptional regulator N-terminus J6B58_11015 PF12833 Helix-turn-helix domain J6B58_11035 PF00440 Bacterial regulatory proteins, tetR family J6B58_11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_11055 PF03466 LysR substrate binding domain J6B58_11060 PF01144 Coenzyme A transferase J6B58_11065 PF01144 Coenzyme A transferase J6B58_11070 PF02667 Short chain fatty acid transporter J6B58_11075 PF00108 Thiolase, N-terminal domain J6B58_11075 PF02803 Thiolase, C-terminal domain J6B58_11080 PF03466 LysR substrate binding domain J6B58_11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_11085 PF03466 LysR substrate binding domain J6B58_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_11100 PF10415 Fumarase C C-terminus J6B58_11100 PF00206 Lyase J6B58_11105 PF00593 TonB dependent receptor J6B58_11105 PF07715 TonB-dependent Receptor Plug Domain J6B58_11110 PF00083 Sugar (and other) transporter J6B58_11125 PF00005 ABC transporter J6B58_11130 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_11135 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J6B58_11150 PF00392 Bacterial regulatory proteins, gntR family J6B58_11150 PF07702 UTRA domain J6B58_11155 PF02417 Chromate transporter J6B58_11160 PF02525 Flavodoxin-like fold J6B58_11165 PF01638 HxlR-like helix-turn-helix J6B58_11170 PF12833 Helix-turn-helix domain J6B58_11170 PF06445 GyrI-like small molecule binding domain J6B58_11185 PF01925 Sulfite exporter TauE/SafE J6B58_11190 PF00753 Metallo-beta-lactamase superfamily J6B58_11190 PF04273 Putative phosphatase (DUF442) J6B58_11195 PF00753 Metallo-beta-lactamase superfamily J6B58_11195 PF04273 Putative phosphatase (DUF442) J6B58_11200 PF00072 Response regulator receiver domain J6B58_11200 PF00158 Sigma-54 interaction domain J6B58_11200 PF02954 Bacterial regulatory protein, Fis family J6B58_11205 PF01062 Bestrophin, RFP-TM, chloride channel J6B58_11210 PF00107 Zinc-binding dehydrogenase J6B58_11210 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_11215 PF00106 short chain dehydrogenase J6B58_11220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J6B58_11220 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_11225 PF00364 Biotin-requiring enzyme J6B58_11225 PF02817 e3 binding domain J6B58_11225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J6B58_11230 PF02779 Transketolase, pyrimidine binding domain J6B58_11230 PF02780 Transketolase, C-terminal domain J6B58_11235 PF00676 Dehydrogenase E1 component J6B58_11240 PF04055 Radical SAM superfamily J6B58_11255 PF00990 Diguanylate cyclase, GGDEF domain J6B58_11255 PF08448 PAS fold J6B58_11260 PF01264 Chorismate synthase J6B58_11265 PF05175 Methyltransferase small domain J6B58_11270 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_11280 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_11280 PF17862 AAA+ lid domain J6B58_11280 PF01434 Peptidase family M41 J6B58_11290 PF05166 YcgL domain J6B58_11310 PF00570 HRDC domain J6B58_11310 PF01612 3'-5' exonuclease J6B58_11315 PF13662 Toprim domain J6B58_11315 PF02132 RecR protein J6B58_11320 PF02575 YbaB/EbfC DNA-binding family J6B58_11330 PF01053 Cys/Met metabolism PLP-dependent enzyme J6B58_11335 PF00561 alpha/beta hydrolase fold J6B58_11340 PF08241 Methyltransferase domain J6B58_11370 PF01230 HIT domain J6B58_11405 PF00005 ABC transporter J6B58_11410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_11420 PF02684 Lipid-A-disaccharide synthetase J6B58_11425 PF07715 TonB-dependent Receptor Plug Domain J6B58_11425 PF00593 TonB dependent receptor J6B58_11445 PF01925 Sulfite exporter TauE/SafE J6B58_11450 PF00793 DAHP synthetase I family J6B58_11455 PF02654 Cobalamin-5-phosphate synthase J6B58_11465 PF00300 Histidine phosphatase superfamily (branch 1) J6B58_11470 PF02277 Phosphoribosyltransferase J6B58_11475 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J6B58_11485 PF13419 Haloacid dehalogenase-like hydrolase J6B58_11510 PF07715 TonB-dependent Receptor Plug Domain J6B58_11510 PF00593 TonB dependent receptor J6B58_11515 PF03737 Aldolase/RraA J6B58_11525 PF06276 Ferric iron reductase FhuF-like transporter J6B58_11525 PF04183 IucA / IucC family J6B58_11530 PF04183 IucA / IucC family J6B58_11530 PF06276 Ferric iron reductase FhuF-like transporter J6B58_11535 PF07690 Major Facilitator Superfamily J6B58_11540 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J6B58_11545 PF04183 IucA / IucC family J6B58_11545 PF06276 Ferric iron reductase FhuF-like transporter J6B58_11550 PF04073 Aminoacyl-tRNA editing domain J6B58_11560 PF03109 ABC1 family J6B58_11565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_11565 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_11565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_11570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_11570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_11570 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_11575 PF00487 Fatty acid desaturase J6B58_11580 PF12833 Helix-turn-helix domain J6B58_11580 PF12852 Cupin J6B58_11585 PF09312 SurA N-terminal domain J6B58_11585 PF00639 PPIC-type PPIASE domain J6B58_11590 PF00216 Bacterial DNA-binding protein J6B58_11605 PF02082 Transcriptional regulator J6B58_11610 PF00266 Aminotransferase class-V J6B58_11615 PF01592 NifU-like N terminal domain J6B58_11620 PF01521 Iron-sulphur cluster biosynthesis J6B58_11625 PF00226 DnaJ domain J6B58_11625 PF07743 HSCB C-terminal oligomerisation domain J6B58_11630 PF00012 Hsp70 protein J6B58_11635 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_11640 PF00211 Adenylate and Guanylate cyclase catalytic domain J6B58_11650 PF17757 UvrB interaction domain J6B58_11650 PF03461 TRCF domain J6B58_11650 PF00271 Helicase conserved C-terminal domain J6B58_11650 PF00270 DEAD/DEAH box helicase J6B58_11650 PF02559 CarD-like/TRCF domain J6B58_11670 PF03737 Aldolase/RraA J6B58_11675 PF13460 NAD(P)H-binding J6B58_11680 PF01649 Ribosomal protein S20 J6B58_11690 PF00459 Inositol monophosphatase family J6B58_11705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6B58_11705 PF00005 ABC transporter J6B58_11710 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_11715 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_11720 PF01432 Peptidase family M3 J6B58_11735 PF07715 TonB-dependent Receptor Plug Domain J6B58_11735 PF00593 TonB dependent receptor J6B58_11745 PF01618 MotA/TolQ/ExbB proton channel family J6B58_11750 PF02472 Biopolymer transport protein ExbD/TolR J6B58_11755 PF02472 Biopolymer transport protein ExbD/TolR J6B58_11765 PF01274 Malate synthase J6B58_11770 PF03969 AFG1-like ATPase J6B58_11780 PF00743 Flavin-binding monooxygenase-like J6B58_11790 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J6B58_11800 PF00216 Bacterial DNA-binding protein J6B58_11805 PF00575 S1 RNA binding domain J6B58_11810 PF02224 Cytidylate kinase J6B58_11820 PF14437 MafB19-like deaminase J6B58_11830 PF03167 Uracil DNA glycosylase superfamily J6B58_11840 PF03934 Type II secretion system (T2SS), protein K J6B58_11845 PF07963 Prokaryotic N-terminal methylation motif J6B58_11845 PF11612 Type II secretion system (T2SS), protein J J6B58_11850 PF07963 Prokaryotic N-terminal methylation motif J6B58_11850 PF02501 Type II secretion system (T2SS), protein I J6B58_11865 PF01026 TatD related DNase J6B58_11875 PF09115 DNA polymerase III, delta subunit, C terminal J6B58_11880 PF02348 Cytidylyltransferase J6B58_11885 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J6B58_11890 PF00005 ABC transporter J6B58_11890 PF00664 ABC transporter transmembrane region J6B58_11900 PF01618 MotA/TolQ/ExbB proton channel family J6B58_11905 PF02195 ParB-like nuclease domain J6B58_11905 PF17762 HTH domain found in ParB protein J6B58_11910 PF13614 AAA domain J6B58_11915 PF02527 rRNA small subunit methyltransferase G J6B58_11920 PF00483 Nucleotidyl transferase J6B58_11925 PF01636 Phosphotransferase enzyme family J6B58_11930 PF04453 LPS transport system D J6B58_11930 PF03968 OstA-like protein J6B58_11935 PF00639 PPIC-type PPIASE domain J6B58_11935 PF09312 SurA N-terminal domain J6B58_11940 PF01116 Fructose-bisphosphate aldolase class-II J6B58_11950 PF00162 Phosphoglycerate kinase J6B58_11960 PF02545 Maf-like protein J6B58_11965 PF08007 Cupin superfamily protein J6B58_11980 PF00375 Sodium:dicarboxylate symporter family J6B58_11985 PF06912 Protein of unknown function (DUF1275) J6B58_11990 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J6B58_11995 PF00664 ABC transporter transmembrane region J6B58_11995 PF00005 ABC transporter J6B58_12005 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J6B58_12005 PF12833 Helix-turn-helix domain J6B58_12010 PF01597 Glycine cleavage H-protein J6B58_12015 PF02146 Sir2 family J6B58_12020 PF00474 Sodium:solute symporter family J6B58_12025 PF01037 Lrp/AsnC ligand binding domain J6B58_12030 PF00171 Aldehyde dehydrogenase family J6B58_12030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J6B58_12030 PF01619 Proline dehydrogenase J6B58_12030 PF14850 DNA-binding domain of Proline dehydrogenase J6B58_12035 PF04229 GrpB protein J6B58_12040 PF05958 tRNA (Uracil-5-)-methyltransferase J6B58_12050 PF09992 Phosphodiester glycosidase J6B58_12060 PF04264 YceI-like domain J6B58_12070 PF02780 Transketolase, C-terminal domain J6B58_12070 PF00456 Transketolase, thiamine diphosphate binding domain J6B58_12070 PF02779 Transketolase, pyrimidine binding domain J6B58_12075 PF02773 S-adenosylmethionine synthetase, C-terminal domain J6B58_12075 PF02772 S-adenosylmethionine synthetase, central domain J6B58_12075 PF00438 S-adenosylmethionine synthetase, N-terminal domain J6B58_12095 PF00905 Penicillin binding protein transpeptidase domain J6B58_12110 PF02075 Crossover junction endodeoxyribonuclease RuvC J6B58_12115 PF01256 Carbohydrate kinase J6B58_12115 PF03853 YjeF-related protein N-terminus J6B58_12120 PF08331 Domain of unknown function (DUF1730) J6B58_12125 PF06968 Biotin and Thiamin Synthesis associated domain J6B58_12125 PF04055 Radical SAM superfamily J6B58_12140 PF16970 Type-1 fimbrial protein, A J6B58_12145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J6B58_12145 PF02753 Pili assembly chaperone PapD, C-terminal domain J6B58_12150 PF00577 Outer membrane usher protein J6B58_12150 PF13954 PapC N-terminal domain J6B58_12150 PF13953 PapC C-terminal domain J6B58_12170 PF00892 EamA-like transporter family J6B58_12180 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J6B58_12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12190 PF03466 LysR substrate binding domain J6B58_12210 PF00440 Bacterial regulatory proteins, tetR family J6B58_12220 PF01709 Transcriptional regulator J6B58_12225 PF01037 Lrp/AsnC ligand binding domain J6B58_12235 PF00005 ABC transporter J6B58_12240 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_12245 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_12260 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J6B58_12260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_12270 PF00296 Luciferase-like monooxygenase J6B58_12275 PF03180 NLPA lipoprotein J6B58_12280 PF03180 NLPA lipoprotein J6B58_12285 PF00005 ABC transporter J6B58_12285 PF09383 NIL domain J6B58_12290 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_12295 PF06071 Protein of unknown function (DUF933) J6B58_12295 PF01926 50S ribosome-binding GTPase J6B58_12320 PF03591 AzlC protein J6B58_12325 PF05437 Branched-chain amino acid transport protein (AzlD) J6B58_12335 PF02222 ATP-grasp domain J6B58_12340 PF01966 HD domain J6B58_12340 PF01909 Nucleotidyltransferase domain J6B58_12340 PF08335 GlnD PII-uridylyltransferase J6B58_12345 PF00155 Aminotransferase class I and II J6B58_12355 PF12833 Helix-turn-helix domain J6B58_12355 PF12852 Cupin J6B58_12360 PF00255 Glutathione peroxidase J6B58_12365 PF01641 SelR domain J6B58_12370 PF00155 Aminotransferase class I and II J6B58_12375 PF00375 Sodium:dicarboxylate symporter family J6B58_12380 PF17763 Glutaminase/Asparaginase C-terminal domain J6B58_12380 PF00710 Asparaginase, N-terminal J6B58_12385 PF07733 Bacterial DNA polymerase III alpha NTPase domain J6B58_12385 PF02811 PHP domain J6B58_12385 PF01336 OB-fold nucleic acid binding domain J6B58_12385 PF14579 Helix-hairpin-helix motif J6B58_12385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J6B58_12390 PF00588 SpoU rRNA Methylase family J6B58_12395 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_12410 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_12410 PF13192 Thioredoxin domain J6B58_12425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12425 PF03466 LysR substrate binding domain J6B58_12430 PF01758 Sodium Bile acid symporter family J6B58_12435 PF01022 Bacterial regulatory protein, arsR family J6B58_12440 PF03960 ArsC family J6B58_12450 PF13382 Adenine deaminase C-terminal domain J6B58_12450 PF01979 Amidohydrolase family J6B58_12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12460 PF03466 LysR substrate binding domain J6B58_12470 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J6B58_12475 PF01177 Asp/Glu/Hydantoin racemase J6B58_12480 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J6B58_12485 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_12490 PF00005 ABC transporter J6B58_12495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J6B58_12505 PF00083 Sugar (and other) transporter J6B58_12510 PF00296 Luciferase-like monooxygenase J6B58_12525 PF01654 Cytochrome bd terminal oxidase subunit I J6B58_12530 PF02322 Cytochrome bd terminal oxidase subunit II J6B58_12540 PF00392 Bacterial regulatory proteins, gntR family J6B58_12540 PF00155 Aminotransferase class I and II J6B58_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12545 PF03466 LysR substrate binding domain J6B58_12560 PF00698 Acyl transferase domain J6B58_12565 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG J6B58_12575 PF01039 Carboxyl transferase domain J6B58_12580 PF06857 Malonate decarboxylase delta subunit (MdcD) J6B58_12585 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J6B58_12590 PF16957 Malonate decarboxylase, alpha subunit, transporter J6B58_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12595 PF03466 LysR substrate binding domain J6B58_12605 PF07690 Major Facilitator Superfamily J6B58_12620 PF00155 Aminotransferase class I and II J6B58_12620 PF00392 Bacterial regulatory proteins, gntR family J6B58_12625 PF04172 LrgB-like family J6B58_12630 PF03788 LrgA family J6B58_12635 PF03466 LysR substrate binding domain J6B58_12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12640 PF02798 Glutathione S-transferase, N-terminal domain J6B58_12640 PF14834 Glutathione S-transferase, C-terminal domain J6B58_12645 PF02798 Glutathione S-transferase, N-terminal domain J6B58_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12650 PF03466 LysR substrate binding domain J6B58_12660 PF00581 Rhodanese-like domain J6B58_12665 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_12675 PF00266 Aminotransferase class-V J6B58_12680 PF01810 LysE type translocator J6B58_12685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12685 PF03466 LysR substrate binding domain J6B58_12690 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6B58_12695 PF00497 Bacterial extracellular solute-binding proteins, family 3 J6B58_12700 PF00005 ABC transporter J6B58_12705 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_12710 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_12725 PF00072 Response regulator receiver domain J6B58_12730 PF00072 Response regulator receiver domain J6B58_12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_12730 PF09308 LuxQ, periplasmic J6B58_12730 PF00512 His Kinase A (phospho-acceptor) domain J6B58_12740 PF01037 Lrp/AsnC ligand binding domain J6B58_12740 PF13404 AsnC-type helix-turn-helix domain J6B58_12750 PF00717 Peptidase S24-like J6B58_12775 PF00199 Catalase J6B58_12775 PF18011 C-terminal domain found in long catalases J6B58_12775 PF06628 Catalase-related immune-responsive J6B58_12785 PF02464 Competence-damaged protein J6B58_12785 PF00994 Probable molybdopterin binding domain J6B58_12785 PF18146 Damage-inducible protein CinA KH domain J6B58_12820 PF03466 LysR substrate binding domain J6B58_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12840 PF13193 AMP-binding enzyme C-terminal domain J6B58_12840 PF00501 AMP-binding enzyme J6B58_12845 PF00440 Bacterial regulatory proteins, tetR family J6B58_12850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_12850 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_12850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_12855 PF01039 Carboxyl transferase domain J6B58_12860 PF00378 Enoyl-CoA hydratase/isomerase J6B58_12865 PF00289 Biotin carboxylase, N-terminal domain J6B58_12865 PF00364 Biotin-requiring enzyme J6B58_12865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6B58_12865 PF18140 Propionyl-coenzyme A carboxylase BT domain J6B58_12865 PF02785 Biotin carboxylase C-terminal domain J6B58_12870 PF00682 HMGL-like J6B58_12875 PF03466 LysR substrate binding domain J6B58_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_12890 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_12890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_12890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_12890 PF12806 Acetyl-CoA dehydrogenase C-terminal like J6B58_12900 PF07690 Major Facilitator Superfamily J6B58_12910 PF01144 Coenzyme A transferase J6B58_12915 PF01144 Coenzyme A transferase J6B58_12920 PF07690 Major Facilitator Superfamily J6B58_12925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_12925 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_12925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_12930 PF00378 Enoyl-CoA hydratase/isomerase J6B58_12940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6B58_12940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6B58_12940 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain J6B58_12945 PF02803 Thiolase, C-terminal domain J6B58_12945 PF00108 Thiolase, N-terminal domain J6B58_12950 PF09339 IclR helix-turn-helix domain J6B58_12955 PF07690 Major Facilitator Superfamily J6B58_12960 PF03060 Nitronate monooxygenase J6B58_12965 PF00378 Enoyl-CoA hydratase/isomerase J6B58_12970 PF09339 IclR helix-turn-helix domain J6B58_12975 PF02515 CoA-transferase family III J6B58_12980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_12980 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_12980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_12985 PF07690 Major Facilitator Superfamily J6B58_12990 PF13419 Haloacid dehalogenase-like hydrolase J6B58_12995 PF00266 Aminotransferase class-V J6B58_13000 PF01266 FAD dependent oxidoreductase J6B58_13005 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_13020 PF00392 Bacterial regulatory proteins, gntR family J6B58_13020 PF07702 UTRA domain J6B58_13025 PF01494 FAD binding domain J6B58_13030 PF01614 Bacterial transcriptional regulator J6B58_13030 PF09339 IclR helix-turn-helix domain J6B58_13035 PF02525 Flavodoxin-like fold J6B58_13040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_13040 PF03466 LysR substrate binding domain J6B58_13045 PF02627 Carboxymuconolactone decarboxylase family J6B58_13050 PF00171 Aldehyde dehydrogenase family J6B58_13060 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J6B58_13070 PF00171 Aldehyde dehydrogenase family J6B58_13075 PF00296 Luciferase-like monooxygenase J6B58_13080 PF01613 Flavin reductase like domain J6B58_13085 PF12697 Alpha/beta hydrolase family J6B58_13105 PF01292 Prokaryotic cytochrome b561 J6B58_13110 PF00199 Catalase J6B58_13115 PF07690 Major Facilitator Superfamily J6B58_13120 PF00682 HMGL-like J6B58_13125 PF02515 CoA-transferase family III J6B58_13140 PF06719 AraC-type transcriptional regulator N-terminus J6B58_13140 PF12833 Helix-turn-helix domain J6B58_13180 PF03061 Thioesterase superfamily J6B58_13185 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_13190 PF08223 PaaX-like protein C-terminal domain J6B58_13190 PF07848 PaaX-like protein J6B58_13195 PF00501 AMP-binding enzyme J6B58_13195 PF14535 AMP-binding enzyme C-terminal domain J6B58_13200 PF00108 Thiolase, N-terminal domain J6B58_13200 PF02803 Thiolase, C-terminal domain J6B58_13220 PF00378 Enoyl-CoA hydratase/isomerase J6B58_13225 PF00378 Enoyl-CoA hydratase/isomerase J6B58_13230 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_13230 PF00970 Oxidoreductase FAD-binding domain J6B58_13230 PF00175 Oxidoreductase NAD-binding domain J6B58_13235 PF01883 Iron-sulfur cluster assembly protein J6B58_13240 PF05138 Phenylacetic acid catabolic protein J6B58_13245 PF06243 Phenylacetic acid degradation B J6B58_13250 PF05138 Phenylacetic acid catabolic protein J6B58_13255 PF00171 Aldehyde dehydrogenase family J6B58_13255 PF01575 MaoC like domain J6B58_13260 PF03313 Serine dehydratase alpha chain J6B58_13260 PF03315 Serine dehydratase beta chain J6B58_13265 PF13520 Amino acid permease J6B58_13270 PF00171 Aldehyde dehydrogenase family J6B58_13275 PF00083 Sugar (and other) transporter J6B58_13285 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_13285 PF04324 BFD-like [2Fe-2S] binding domain J6B58_13295 PF01266 FAD dependent oxidoreductase J6B58_13300 PF05544 Proline racemase J6B58_13305 PF00392 Bacterial regulatory proteins, gntR family J6B58_13315 PF00701 Dihydrodipicolinate synthetase family J6B58_13325 PF09278 MerR, DNA binding J6B58_13325 PF00376 MerR family regulatory protein J6B58_13335 PF02677 Epoxyqueuosine reductase QueH J6B58_13350 PF07690 Major Facilitator Superfamily J6B58_13355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J6B58_13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_13365 PF03466 LysR substrate binding domain J6B58_13385 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J6B58_13390 PF06812 ImpA, N-terminal, type VI secretion system J6B58_13395 PF07724 AAA domain (Cdc48 subfamily) J6B58_13395 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_13395 PF17871 AAA lid domain J6B58_13395 PF10431 C-terminal, D2-small domain, of ClpB protein J6B58_13405 PF00691 OmpA family J6B58_13405 PF01389 OmpA-like transmembrane domain J6B58_13415 PF06744 Type VI secretion protein IcmF C-terminal J6B58_13415 PF14331 ImcF-related N-terminal domain J6B58_13415 PF06761 Intracellular multiplication and human macrophage-killing J6B58_13430 PF05947 Type VI secretion system, TssF J6B58_13445 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J6B58_13470 PF00005 ABC transporter J6B58_13480 PF01425 Amidase J6B58_13485 PF08753 NikR C terminal nickel binding domain J6B58_13485 PF01402 Ribbon-helix-helix protein, copG family J6B58_13495 PF01638 HxlR-like helix-turn-helix J6B58_13500 PF02525 Flavodoxin-like fold J6B58_13505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6B58_13505 PF02785 Biotin carboxylase C-terminal domain J6B58_13505 PF00289 Biotin carboxylase, N-terminal domain J6B58_13520 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_13520 PF13823 Alcohol dehydrogenase GroES-associated J6B58_13520 PF00107 Zinc-binding dehydrogenase J6B58_13530 PF00440 Bacterial regulatory proteins, tetR family J6B58_13545 PF13018 Extended Signal Peptide of Type V secretion system J6B58_13545 PF13332 Hemagglutinin repeat J6B58_13545 PF05860 haemagglutination activity domain J6B58_13545 PF04829 Pre-toxin domain with VENN motif J6B58_13550 PF17287 POTRA domain J6B58_13550 PF08479 POTRA domain, ShlB-type J6B58_13550 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J6B58_13555 PF00654 Voltage gated chloride channel J6B58_13565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J6B58_13565 PF00364 Biotin-requiring enzyme J6B58_13565 PF00289 Biotin carboxylase, N-terminal domain J6B58_13565 PF02785 Biotin carboxylase C-terminal domain J6B58_13575 PF07286 Protein of unknown function (DUF1445) J6B58_13580 PF03746 LamB/YcsF family J6B58_13585 PF01566 Natural resistance-associated macrophage protein J6B58_13590 PF03466 LysR substrate binding domain J6B58_13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_13625 PF05593 RHS Repeat J6B58_13625 PF03527 RHS protein J6B58_13630 PF13296 Putative type VI secretion system Rhs element Vgr J6B58_13630 PF04717 Type VI secretion system, phage-baseplate injector J6B58_13630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J6B58_13640 PF13419 Haloacid dehalogenase-like hydrolase J6B58_13660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6B58_13660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6B58_13680 PF07690 Major Facilitator Superfamily J6B58_13690 PF03279 Bacterial lipid A biosynthesis acyltransferase J6B58_13695 PF00563 EAL domain J6B58_13695 PF00990 Diguanylate cyclase, GGDEF domain J6B58_13695 PF03707 Bacterial signalling protein N terminal repeat J6B58_13700 PF00892 EamA-like transporter family J6B58_13705 PF01037 Lrp/AsnC ligand binding domain J6B58_13710 PF05188 MutS domain II J6B58_13710 PF05192 MutS domain III J6B58_13710 PF05190 MutS family domain IV J6B58_13710 PF01624 MutS domain I J6B58_13710 PF00488 MutS domain V J6B58_13720 PF11953 Domain of unknown function (DUF3470) J6B58_13720 PF00037 4Fe-4S binding domain J6B58_13730 PF01596 O-methyltransferase J6B58_13740 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_13745 PF01205 Uncharacterized protein family UPF0029 J6B58_13755 PF03412 Peptidase C39 family J6B58_13755 PF00664 ABC transporter transmembrane region J6B58_13755 PF00005 ABC transporter J6B58_13760 PF02321 Outer membrane efflux protein J6B58_13765 PF00005 ABC transporter J6B58_13765 PF12399 Branched-chain amino acid ATP-binding cassette transporter J6B58_13770 PF03968 OstA-like protein J6B58_13785 PF00571 CBS domain J6B58_13785 PF01380 SIS domain J6B58_13790 PF09190 DALR domain J6B58_13790 PF01406 tRNA synthetases class I (C) catalytic domain J6B58_13825 PF01638 HxlR-like helix-turn-helix J6B58_13830 PF07690 Major Facilitator Superfamily J6B58_13855 PF03807 NADP oxidoreductase coenzyme F420-dependent J6B58_13855 PF14748 Pyrroline-5-carboxylate reductase dimerisation J6B58_13865 PF00313 'Cold-shock' DNA-binding domain J6B58_13870 PF01810 LysE type translocator J6B58_13900 PF13742 OB-fold nucleic acid binding domain J6B58_13900 PF02601 Exonuclease VII, large subunit J6B58_13935 PF09278 MerR, DNA binding J6B58_13935 PF00376 MerR family regulatory protein J6B58_13940 PF00403 Heavy-metal-associated domain J6B58_13950 PF02954 Bacterial regulatory protein, Fis family J6B58_13950 PF02830 V4R domain J6B58_13950 PF06505 Activator of aromatic catabolism J6B58_13950 PF00158 Sigma-54 interaction domain J6B58_13955 PF06099 Phenol hydroxylase subunit J6B58_13960 PF02332 Methane/Phenol/Toluene Hydroxylase J6B58_13965 PF02406 MmoB/DmpM family J6B58_13970 PF02332 Methane/Phenol/Toluene Hydroxylase J6B58_13970 PF04945 YHS domain J6B58_13980 PF00175 Oxidoreductase NAD-binding domain J6B58_13980 PF00970 Oxidoreductase FAD-binding domain J6B58_13980 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_13990 PF03466 LysR substrate binding domain J6B58_13995 PF00355 Rieske [2Fe-2S] domain J6B58_13995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J6B58_14000 PF00866 Ring hydroxylating beta subunit J6B58_14005 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_14005 PF00175 Oxidoreductase NAD-binding domain J6B58_14005 PF00970 Oxidoreductase FAD-binding domain J6B58_14010 PF00106 short chain dehydrogenase J6B58_14015 PF03594 Benzoate membrane transport protein J6B58_14020 PF07690 Major Facilitator Superfamily J6B58_14030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J6B58_14030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J6B58_14035 PF00270 DEAD/DEAH box helicase J6B58_14035 PF11898 Domain of unknown function (DUF3418) J6B58_14035 PF04408 Helicase associated domain (HA2) J6B58_14035 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J6B58_14035 PF00271 Helicase conserved C-terminal domain J6B58_14040 PF10417 C-terminal domain of 1-Cys peroxiredoxin J6B58_14040 PF00578 AhpC/TSA family J6B58_14060 PF13192 Thioredoxin domain J6B58_14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_14070 PF00043 Glutathione S-transferase, C-terminal domain J6B58_14070 PF02798 Glutathione S-transferase, N-terminal domain J6B58_14080 PF02390 Putative methyltransferase J6B58_14085 PF13417 Glutathione S-transferase, N-terminal domain J6B58_14085 PF00043 Glutathione S-transferase, C-terminal domain J6B58_14095 PF00691 OmpA family J6B58_14095 PF13488 Glycine zipper J6B58_14100 PF01979 Amidohydrolase family J6B58_14105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J6B58_14105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J6B58_14115 PF01170 Putative RNA methylase family UPF0020 J6B58_14115 PF10672 S-adenosylmethionine-dependent methyltransferase J6B58_14115 PF02926 THUMP domain J6B58_14130 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_14130 PF07724 AAA domain (Cdc48 subfamily) J6B58_14130 PF17871 AAA lid domain J6B58_14130 PF02861 Clp amino terminal domain, pathogenicity island component J6B58_14130 PF10431 C-terminal, D2-small domain, of ClpB protein J6B58_14145 PF02566 OsmC-like protein J6B58_14155 PF00027 Cyclic nucleotide-binding domain J6B58_14155 PF13545 Crp-like helix-turn-helix domain J6B58_14160 PF00248 Aldo/keto reductase family J6B58_14175 PF00709 Adenylosuccinate synthetase J6B58_14180 PF13393 Histidyl-tRNA synthetase J6B58_14190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J6B58_14190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J6B58_14195 PF02272 DHHA1 domain J6B58_14195 PF01411 tRNA synthetases class II (A) J6B58_14195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6B58_14200 PF00589 Phage integrase family J6B58_14200 PF13356 Arm DNA-binding domain J6B58_14215 PF00717 Peptidase S24-like J6B58_14220 PF11798 IMS family HHH motif J6B58_14220 PF11799 impB/mucB/samB family C-terminal domain J6B58_14220 PF00817 impB/mucB/samB family J6B58_14220 PF13438 Domain of unknown function (DUF4113) J6B58_14285 PF00712 DNA polymerase III beta subunit, N-terminal domain J6B58_14285 PF02767 DNA polymerase III beta subunit, central domain J6B58_14285 PF02768 DNA polymerase III beta subunit, C-terminal domain J6B58_14325 PF05016 ParE toxin of type II toxin-antitoxin system, parDE J6B58_14475 PF07007 Lysozyme inhibitor LprI J6B58_14525 PF01695 IstB-like ATP binding protein J6B58_14535 PF00145 C-5 cytosine-specific DNA methylase J6B58_14620 PF00929 Exonuclease J6B58_14660 PF13840 ACT domain J6B58_14660 PF00696 Amino acid kinase family J6B58_14660 PF01842 ACT domain J6B58_14665 PF02599 Global regulator protein family J6B58_14670 PF01351 Ribonuclease HII J6B58_14680 PF01292 Prokaryotic cytochrome b561 J6B58_14685 PF00962 Adenosine/AMP deaminase J6B58_14690 PF00860 Permease family J6B58_14700 PF00743 Flavin-binding monooxygenase-like J6B58_14705 PF00106 short chain dehydrogenase J6B58_14715 PF17954 Quercetinase C-terminal cupin domain J6B58_14715 PF02678 Pirin J6B58_14720 PF17932 Tetracyclin repressor-like, C-terminal domain J6B58_14720 PF00440 Bacterial regulatory proteins, tetR family J6B58_14730 PF00106 short chain dehydrogenase J6B58_14735 PF00743 Flavin-binding monooxygenase-like J6B58_14740 PF04072 Leucine carboxyl methyltransferase J6B58_14745 PF12833 Helix-turn-helix domain J6B58_14745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J6B58_14750 PF00743 Flavin-binding monooxygenase-like J6B58_14755 PF00106 short chain dehydrogenase J6B58_14760 PF07859 alpha/beta hydrolase fold J6B58_14765 PF05199 GMC oxidoreductase J6B58_14770 PF03573 outer membrane porin, OprD family J6B58_14775 PF07690 Major Facilitator Superfamily J6B58_14780 PF00884 Sulfatase J6B58_14785 PF03781 Sulfatase-modifying factor enzyme 1 J6B58_14795 PF00355 Rieske [2Fe-2S] domain J6B58_14800 PF00175 Oxidoreductase NAD-binding domain J6B58_14800 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_14815 PF07690 Major Facilitator Superfamily J6B58_14820 PF00378 Enoyl-CoA hydratase/isomerase J6B58_14825 PF00171 Aldehyde dehydrogenase family J6B58_14835 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_14835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_14835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_14840 PF03573 outer membrane porin, OprD family J6B58_14860 PF07729 FCD domain J6B58_14860 PF00392 Bacterial regulatory proteins, gntR family J6B58_14865 PF00171 Aldehyde dehydrogenase family J6B58_14870 PF00701 Dihydrodipicolinate synthetase family J6B58_14875 PF13378 Enolase C-terminal domain-like J6B58_14880 PF07690 Major Facilitator Superfamily J6B58_14885 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J6B58_14885 PF08666 SAF domain J6B58_14890 PF00892 EamA-like transporter family J6B58_14895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J6B58_14895 PF12833 Helix-turn-helix domain J6B58_14900 PF00171 Aldehyde dehydrogenase family J6B58_14925 PF00324 Amino acid permease J6B58_14930 PF04958 Arginine N-succinyltransferase beta subunit J6B58_14935 PF00202 Aminotransferase class-III J6B58_14945 PF00171 Aldehyde dehydrogenase family J6B58_14955 PF07729 FCD domain J6B58_14955 PF00392 Bacterial regulatory proteins, gntR family J6B58_14965 PF00324 Amino acid permease J6B58_14970 PF01266 FAD dependent oxidoreductase J6B58_14975 PF00324 Amino acid permease J6B58_15005 PF03527 RHS protein J6B58_15005 PF05593 RHS Repeat J6B58_15010 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J6B58_15010 PF04717 Type VI secretion system, phage-baseplate injector J6B58_15010 PF13296 Putative type VI secretion system Rhs element Vgr J6B58_15025 PF03180 NLPA lipoprotein J6B58_15030 PF05987 Bacterial protein of unknown function (DUF898) J6B58_15045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6B58_15045 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_15055 PF00764 Arginosuccinate synthase J6B58_15060 PF00563 EAL domain J6B58_15060 PF00990 Diguanylate cyclase, GGDEF domain J6B58_15060 PF01590 GAF domain J6B58_15060 PF00360 Phytochrome region J6B58_15065 PF01979 Amidohydrolase family J6B58_15070 PF00929 Exonuclease J6B58_15080 PF07715 TonB-dependent Receptor Plug Domain J6B58_15080 PF00593 TonB dependent receptor J6B58_15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_15085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J6B58_15090 PF00005 ABC transporter J6B58_15090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J6B58_15095 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_15095 PF12911 N-terminal TM domain of oligopeptide transport permease C J6B58_15100 PF00528 Binding-protein-dependent transport system inner membrane component J6B58_15105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J6B58_15110 PF01476 LysM domain J6B58_15110 PF01464 Transglycosylase SLT domain J6B58_15110 PF01476 LysM domain J6B58_15110 PF01464 Transglycosylase SLT domain J6B58_15115 PF00929 Exonuclease J6B58_15125 PF00293 NUDIX domain J6B58_15125 PF09297 NADH pyrophosphatase zinc ribbon domain J6B58_15135 PF04972 BON domain J6B58_15140 PF02021 Uncharacterised protein family UPF0102 J6B58_15145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J6B58_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_15155 PF03466 LysR substrate binding domain J6B58_15160 PF01810 LysE type translocator J6B58_15170 PF13411 MerR HTH family regulatory protein J6B58_15180 PF01494 FAD binding domain J6B58_15185 PF01494 FAD binding domain J6B58_15190 PF00557 Metallopeptidase family M24 J6B58_15190 PF05195 Aminopeptidase P, N-terminal domain J6B58_15225 PF08019 Phosphoethanolamine transferase EptA/EptB J6B58_15225 PF00884 Sulfatase J6B58_15275 PF01476 LysM domain J6B58_15275 PF08525 Opacity-associated protein A N-terminal motif J6B58_15275 PF01551 Peptidase family M23 J6B58_15290 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system J6B58_15450 PF00145 C-5 cytosine-specific DNA methylase J6B58_15540 PF01812 5-formyltetrahydrofolate cyclo-ligase family J6B58_15545 PF04355 SmpA / OmlA family J6B58_15545 PF00691 OmpA family J6B58_15550 PF13018 Extended Signal Peptide of Type V secretion system J6B58_15550 PF05662 Coiled stalk of trimeric autotransporter adhesin J6B58_15550 PF03895 YadA-like membrane anchor domain J6B58_15550 PF05658 Head domain of trimeric autotransporter adhesin J6B58_15555 PF00004 ATPase family associated with various cellular activities (AAA) J6B58_15555 PF02190 ATP-dependent protease La (LON) substrate-binding domain J6B58_15555 PF05362 Lon protease (S16) C-terminal proteolytic domain J6B58_15560 PF02590 Predicted SPOUT methyltransferase J6B58_15565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J6B58_15575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J6B58_15575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J6B58_15580 PF04060 Putative Fe-S cluster J6B58_15585 PF00633 Helix-hairpin-helix motif J6B58_15585 PF00730 HhH-GPD superfamily base excision DNA repair protein J6B58_15585 PF10576 Iron-sulfur binding domain of endonuclease III J6B58_15595 PF05191 Adenylate kinase, active site lid J6B58_15610 PF03717 Penicillin-binding Protein dimerisation domain J6B58_15610 PF00905 Penicillin binding protein transpeptidase domain J6B58_15625 PF02492 CobW/HypB/UreG, nucleotide-binding domain J6B58_15630 PF01730 UreF J6B58_15635 PF05194 UreE urease accessory protein, C-terminal domain J6B58_15635 PF02814 UreE urease accessory protein, N-terminal domain J6B58_15645 PF00547 Urease, gamma subunit J6B58_15650 PF01774 UreD urease accessory protein J6B58_15665 PF00463 Isocitrate lyase family J6B58_15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_15670 PF03466 LysR substrate binding domain J6B58_15675 PF00571 CBS domain J6B58_15675 PF03471 Transporter associated domain J6B58_15675 PF01595 Cyclin M transmembrane N-terminal domain J6B58_15680 PF03600 Citrate transporter J6B58_15695 PF00009 Elongation factor Tu GTP binding domain J6B58_15700 PF01507 Phosphoadenosine phosphosulfate reductase family J6B58_15710 PF14052 Capsule assembly protein Wzi J6B58_15715 PF01336 OB-fold nucleic acid binding domain J6B58_15715 PF00152 tRNA synthetases class II (D, K and N) J6B58_15730 PF00301 Rubredoxin J6B58_15735 PF18113 Rubredoxin binding C-terminal domain J6B58_15735 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_15740 PF00561 alpha/beta hydrolase fold J6B58_15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_15745 PF03466 LysR substrate binding domain J6B58_15760 PF13089 Polyphosphate kinase N-terminal domain J6B58_15760 PF17941 Polyphosphate kinase C-terminal domain 1 J6B58_15760 PF02503 Polyphosphate kinase middle domain J6B58_15760 PF13090 Polyphosphate kinase C-terminal domain 2 J6B58_15765 PF00912 Transglycosylase J6B58_15770 PF01694 Rhomboid family J6B58_15780 PF00005 ABC transporter J6B58_15785 PF13472 GDSL-like Lipase/Acylhydrolase family J6B58_15790 PF00484 Carbonic anhydrase J6B58_15795 PF00561 alpha/beta hydrolase fold J6B58_15805 PF00593 TonB dependent receptor J6B58_15805 PF07715 TonB-dependent Receptor Plug Domain J6B58_15810 PF01521 Iron-sulphur cluster biosynthesis J6B58_15810 PF01106 NifU-like domain J6B58_15820 PF00884 Sulfatase J6B58_15825 PF03781 Sulfatase-modifying factor enzyme 1 J6B58_15840 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_15845 PF01384 Phosphate transporter family J6B58_15850 PF02574 Homocysteine S-methyltransferase J6B58_15850 PF00809 Pterin binding enzyme J6B58_15850 PF02607 B12 binding domain J6B58_15850 PF02310 B12 binding domain J6B58_15850 PF02965 Vitamin B12 dependent methionine synthase, activation domain J6B58_15855 PF02779 Transketolase, pyrimidine binding domain J6B58_15855 PF02780 Transketolase, C-terminal domain J6B58_15860 PF00456 Transketolase, thiamine diphosphate binding domain J6B58_15865 PF07690 Major Facilitator Superfamily J6B58_15875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_15875 PF03466 LysR substrate binding domain J6B58_15885 PF01263 Aldose 1-epimerase J6B58_15890 PF07690 Major Facilitator Superfamily J6B58_15895 PF12833 Helix-turn-helix domain J6B58_15895 PF02311 AraC-like ligand binding domain J6B58_15900 PF04960 Glutaminase J6B58_15905 PF01327 Polypeptide deformylase J6B58_15910 PF07690 Major Facilitator Superfamily J6B58_15920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6B58_15920 PF00205 Thiamine pyrophosphate enzyme, central domain J6B58_15920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6B58_15925 PF00171 Aldehyde dehydrogenase family J6B58_15930 PF01958 Domain of unknown function DUF108 J6B58_15930 PF03447 Homoserine dehydrogenase, NAD binding domain J6B58_15940 PF12697 Alpha/beta hydrolase family J6B58_15950 PF07690 Major Facilitator Superfamily J6B58_15955 PF14759 Reductase C-terminal J6B58_15955 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_15960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J6B58_15970 PF00355 Rieske [2Fe-2S] domain J6B58_15980 PF00355 Rieske [2Fe-2S] domain J6B58_15985 PF09339 IclR helix-turn-helix domain J6B58_15985 PF01614 Bacterial transcriptional regulator J6B58_16000 PF00378 Enoyl-CoA hydratase/isomerase J6B58_16010 PF00535 Glycosyl transferase family 2 J6B58_16015 PF14883 Hypothetical glycosyl hydrolase family 13 J6B58_16015 PF01522 Polysaccharide deacetylase J6B58_16020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6B58_16025 PF07152 YaeQ protein J6B58_16030 PF00375 Sodium:dicarboxylate symporter family J6B58_16035 PF02492 CobW/HypB/UreG, nucleotide-binding domain J6B58_16035 PF07683 Cobalamin synthesis protein cobW C-terminal domain J6B58_16045 PF03061 Thioesterase superfamily J6B58_16055 PF02028 BCCT, betaine/carnitine/choline family transporter J6B58_16060 PF02028 BCCT, betaine/carnitine/choline family transporter J6B58_16065 PF00440 Bacterial regulatory proteins, tetR family J6B58_16065 PF13977 BetI-type transcriptional repressor, C-terminal J6B58_16070 PF00171 Aldehyde dehydrogenase family J6B58_16075 PF05199 GMC oxidoreductase J6B58_16075 PF00732 GMC oxidoreductase J6B58_16080 PF06039 Malate:quinone oxidoreductase (Mqo) J6B58_16090 PF02574 Homocysteine S-methyltransferase J6B58_16095 PF13520 Amino acid permease J6B58_16120 PF01126 Heme oxygenase J6B58_16130 PF04575 Protein of unknown function (DUF560) J6B58_16140 PF07715 TonB-dependent Receptor Plug Domain J6B58_16140 PF00593 TonB dependent receptor J6B58_16150 PF04542 Sigma-70 region 2 J6B58_16150 PF08281 Sigma-70, region 4 J6B58_16160 PF00701 Dihydrodipicolinate synthetase family J6B58_16165 PF00083 Sugar (and other) transporter J6B58_16200 PF03852 DNA mismatch endonuclease Vsr J6B58_16205 PF00145 C-5 cytosine-specific DNA methylase J6B58_16210 PF09561 HpaII restriction endonuclease J6B58_16230 PF07690 Major Facilitator Superfamily J6B58_16235 PF13533 Biotin-lipoyl like J6B58_16240 PF03061 Thioesterase superfamily J6B58_16245 PF00490 Delta-aminolevulinic acid dehydratase J6B58_16250 PF01266 FAD dependent oxidoreductase J6B58_16255 PF08338 Domain of unknown function (DUF1731) J6B58_16255 PF01370 NAD dependent epimerase/dehydratase family J6B58_16275 PF00149 Calcineurin-like phosphoesterase J6B58_16275 PF12320 Type 5 capsule protein repressor C-terminal domain J6B58_16285 PF01168 Alanine racemase, N-terminal domain J6B58_16290 PF00437 Type II/IV secretion system protein J6B58_16295 PF00437 Type II/IV secretion system protein J6B58_16300 PF01475 Ferric uptake regulator family J6B58_16305 PF04355 SmpA / OmlA family J6B58_16310 PF03658 RnfH family Ubiquitin J6B58_16320 PF01814 Hemerythrin HHE cation binding domain J6B58_16325 PF13230 Glutamine amidotransferases class-II J6B58_16335 PF00696 Amino acid kinase family J6B58_16340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J6B58_16340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J6B58_16340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J6B58_16340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J6B58_16345 PF00692 dUTPase J6B58_16350 PF00580 UvrD/REP helicase N-terminal domain J6B58_16350 PF13361 UvrD-like helicase C-terminal domain J6B58_16355 PF13488 Glycine zipper J6B58_16355 PF00691 OmpA family J6B58_16360 PF01553 Acyltransferase J6B58_16370 PF03775 Septum formation inhibitor MinC, C-terminal domain J6B58_16375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J6B58_16380 PF03776 Septum formation topological specificity factor MinE J6B58_16390 PF01810 LysE type translocator J6B58_16395 PF01580 FtsK/SpoIIIE family J6B58_16395 PF17854 FtsK alpha domain J6B58_16395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J6B58_16395 PF09397 Ftsk gamma domain J6B58_16400 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_16405 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J6B58_16410 PF04377 Arginine-tRNA-protein transferase, C terminus J6B58_16410 PF04376 Arginine-tRNA-protein transferase, N terminus J6B58_16415 PF00583 Acetyltransferase (GNAT) family J6B58_16430 PF00009 Elongation factor Tu GTP binding domain J6B58_16430 PF03144 Elongation factor Tu domain 2 J6B58_16430 PF03143 Elongation factor Tu C-terminal domain J6B58_16435 PF00009 Elongation factor Tu GTP binding domain J6B58_16435 PF03144 Elongation factor Tu domain 2 J6B58_16435 PF14492 Elongation Factor G, domain II J6B58_16435 PF00679 Elongation factor G C-terminus J6B58_16435 PF03764 Elongation factor G, domain IV J6B58_16440 PF00177 Ribosomal protein S7p/S5e J6B58_16445 PF00164 Ribosomal protein S12/S23 J6B58_16455 PF02801 Beta-ketoacyl synthase, C-terminal domain J6B58_16455 PF00109 Beta-ketoacyl synthase, N-terminal domain J6B58_16460 PF03653 Uncharacterised protein family (UPF0093) J6B58_16465 PF05726 Pirin C-terminal cupin domain J6B58_16465 PF02678 Pirin J6B58_16475 PF00795 Carbon-nitrogen hydrolase J6B58_16475 PF02540 NAD synthase J6B58_16490 PF00970 Oxidoreductase FAD-binding domain J6B58_16490 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_16490 PF00175 Oxidoreductase NAD-binding domain J6B58_16495 PF00171 Aldehyde dehydrogenase family J6B58_16500 PF00355 Rieske [2Fe-2S] domain J6B58_16500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J6B58_16505 PF07859 alpha/beta hydrolase fold J6B58_16510 PF02028 BCCT, betaine/carnitine/choline family transporter J6B58_16515 PF00180 Isocitrate/isopropylmalate dehydrogenase J6B58_16520 PF03466 LysR substrate binding domain J6B58_16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_16540 PF00037 4Fe-4S binding domain J6B58_16545 PF01467 Cytidylyltransferase-like J6B58_16550 PF01668 SmpB protein J6B58_16555 PF03358 NADPH-dependent FMN reductase J6B58_16560 PF02578 Multi-copper polyphenol oxidoreductase laccase J6B58_16565 PF00849 RNA pseudouridylate synthase J6B58_16565 PF01479 S4 domain J6B58_16570 PF13525 Outer membrane lipoprotein J6B58_16575 PF10410 DnaB-helicase binding domain of primase J6B58_16575 PF01807 CHC2 zinc finger J6B58_16575 PF08278 DNA primase DnaG DnaB-binding J6B58_16575 PF08275 DNA primase catalytic core, N-terminal domain J6B58_16580 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J6B58_16580 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J6B58_16580 PF01488 Shikimate / quinate 5-dehydrogenase J6B58_16590 PF03550 Outer membrane lipoprotein LolB J6B58_16595 PF08544 GHMP kinases C terminal J6B58_16595 PF00288 GHMP kinases N terminal domain J6B58_16620 PF14572 Phosphoribosyl synthetase-associated domain J6B58_16620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J6B58_16625 PF01386 Ribosomal L25p family J6B58_16630 PF01195 Peptidyl-tRNA hydrolase J6B58_16635 PF02261 Aspartate decarboxylase J6B58_16650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J6B58_16660 PF08543 Phosphomethylpyrimidine kinase J6B58_16660 PF03070 TENA/THI-4/PQQC family J6B58_16660 PF02581 Thiamine monophosphate synthase J6B58_16665 PF01476 LysM domain J6B58_16665 PF04972 BON domain J6B58_16670 PF00550 Phosphopantetheine attachment site J6B58_16680 PF00698 Acyl transferase domain J6B58_16685 PF01783 Ribosomal L32p protein family J6B58_16690 PF02620 Large ribosomal RNA subunit accumulation protein YceD J6B58_16695 PF04315 Elongation factor P hydroxylase J6B58_16700 PF01300 Telomere recombination J6B58_16705 PF02616 Segregation and condensation protein ScpA J6B58_16710 PF04079 Segregation and condensation complex subunit ScpB J6B58_16715 PF00849 RNA pseudouridylate synthase J6B58_16715 PF01479 S4 domain J6B58_16730 PF00155 Aminotransferase class I and II J6B58_16735 PF06968 Biotin and Thiamin Synthesis associated domain J6B58_16735 PF00202 Aminotransferase class-III J6B58_16735 PF04055 Radical SAM superfamily J6B58_16740 PF12697 Alpha/beta hydrolase family J6B58_16740 PF08241 Methyltransferase domain J6B58_16745 PF02358 Trehalose-phosphatase J6B58_16750 PF00982 Glycosyltransferase family 20 J6B58_16755 PF07690 Major Facilitator Superfamily J6B58_16760 PF00210 Ferritin-like domain J6B58_16765 PF01653 NAD-dependent DNA ligase adenylation domain J6B58_16765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J6B58_16765 PF12826 Helix-hairpin-helix motif J6B58_16765 PF00533 BRCA1 C Terminus (BRCT) domain J6B58_16765 PF03120 NAD-dependent DNA ligase OB-fold domain J6B58_16775 PF06470 SMC proteins Flexible Hinge Domain J6B58_16775 PF02463 RecF/RecN/SMC N terminal domain J6B58_16785 PF01925 Sulfite exporter TauE/SafE J6B58_16795 PF03309 Type III pantothenate kinase J6B58_16800 PF00448 SRP54-type protein, GTPase domain J6B58_16800 PF02978 Signal peptide binding domain J6B58_16800 PF02881 SRP54-type protein, helical bundle domain J6B58_16810 PF01207 Dihydrouridine synthase (Dus) J6B58_16840 PF00692 dUTPase J6B58_16855 PF01048 Phosphorylase superfamily J6B58_16860 PF10609 NUBPL iron-transfer P-loop NTPase J6B58_16870 PF09334 tRNA synthetases class I (M) J6B58_16870 PF01588 Putative tRNA binding domain J6B58_16895 PF13533 Biotin-lipoyl like J6B58_16900 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_16915 PF05552 Conserved TM helix J6B58_16930 PF00970 Oxidoreductase FAD-binding domain J6B58_16930 PF00175 Oxidoreductase NAD-binding domain J6B58_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_16935 PF03466 LysR substrate binding domain J6B58_16945 PF00313 'Cold-shock' DNA-binding domain J6B58_16955 PF00361 Proton-conducting membrane transporter J6B58_16960 PF00361 Proton-conducting membrane transporter J6B58_16965 PF00361 Proton-conducting membrane transporter J6B58_16965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J6B58_16970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J6B58_16975 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J6B58_16980 PF12838 4Fe-4S dicluster domain J6B58_16985 PF00146 NADH dehydrogenase J6B58_16990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J6B58_16990 PF00384 Molybdopterin oxidoreductase J6B58_16990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J6B58_16995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J6B58_16995 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J6B58_16995 PF10531 SLBB domain J6B58_17005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J6B58_17005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J6B58_17010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J6B58_17015 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J6B58_17020 PF17151 Periplasmic sensor domain J6B58_17020 PF00990 Diguanylate cyclase, GGDEF domain J6B58_17030 PF00672 HAMP domain J6B58_17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_17030 PF00512 His Kinase A (phospho-acceptor) domain J6B58_17035 PF00072 Response regulator receiver domain J6B58_17035 PF00486 Transcriptional regulatory protein, C terminal J6B58_17045 PF00317 Ribonucleotide reductase, all-alpha domain J6B58_17045 PF03477 ATP cone domain J6B58_17045 PF02867 Ribonucleotide reductase, barrel domain J6B58_17055 PF00268 Ribonucleotide reductase, small chain J6B58_17060 PF00892 EamA-like transporter family J6B58_17065 PF01557 Fumarylacetoacetate (FAA) hydrolase family J6B58_17070 PF01613 Flavin reductase like domain J6B58_17075 PF00296 Luciferase-like monooxygenase J6B58_17080 PF00171 Aldehyde dehydrogenase family J6B58_17085 PF09297 NADH pyrophosphatase zinc ribbon domain J6B58_17085 PF00293 NUDIX domain J6B58_17095 PF00083 Sugar (and other) transporter J6B58_17110 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J6B58_17135 PF17074 Darcynin, domain of unknown function J6B58_17150 PF01613 Flavin reductase like domain J6B58_17155 PF08267 Cobalamin-independent synthase, N-terminal domain J6B58_17155 PF01717 Cobalamin-independent synthase, Catalytic domain J6B58_17170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J6B58_17170 PF12833 Helix-turn-helix domain J6B58_17175 PF07687 Peptidase dimerisation domain J6B58_17175 PF01546 Peptidase family M20/M25/M40 J6B58_17185 PF03466 LysR substrate binding domain J6B58_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_17190 PF07690 Major Facilitator Superfamily J6B58_17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_17200 PF03466 LysR substrate binding domain J6B58_17205 PF00890 FAD binding domain J6B58_17205 PF14537 Cytochrome c3 J6B58_17215 PF02515 CoA-transferase family III J6B58_17220 PF07690 Major Facilitator Superfamily J6B58_17225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J6B58_17225 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_17225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_17230 PF03466 LysR substrate binding domain J6B58_17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_17235 PF00107 Zinc-binding dehydrogenase J6B58_17235 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_17240 PF00962 Adenosine/AMP deaminase J6B58_17265 PF02445 Quinolinate synthetase A protein J6B58_17270 PF01960 ArgJ family J6B58_17275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6B58_17275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6B58_17280 PF00893 Small Multidrug Resistance protein J6B58_17295 PF07732 Multicopper oxidase J6B58_17295 PF07731 Multicopper oxidase J6B58_17295 PF00394 Multicopper oxidase J6B58_17310 PF00834 Ribulose-phosphate 3 epimerase family J6B58_17320 PF00756 Putative esterase J6B58_17330 PF04445 Putative SAM-dependent methyltransferase J6B58_17335 PF00814 Glycoprotease family J6B58_17340 PF00132 Bacterial transferase hexapeptide (six repeats) J6B58_17345 PF00293 NUDIX domain J6B58_17395 PF04715 Anthranilate synthase component I, N terminal region J6B58_17395 PF00425 chorismate binding enzyme J6B58_17400 PF00155 Aminotransferase class I and II J6B58_17405 PF00815 Histidinol dehydrogenase J6B58_17410 PF01634 ATP phosphoribosyltransferase J6B58_17415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J6B58_17420 PF01722 BolA-like protein J6B58_17425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J6B58_17430 PF04963 Sigma-54 factor, core binding domain J6B58_17430 PF00309 Sigma-54 factor, Activator interacting domain (AID) J6B58_17430 PF04552 Sigma-54, DNA binding domain J6B58_17475 PF00795 Carbon-nitrogen hydrolase J6B58_17485 PF01047 MarR family J6B58_17490 PF02566 OsmC-like protein J6B58_17495 PF00437 Type II/IV secretion system protein J6B58_17515 PF00476 DNA polymerase family A J6B58_17515 PF01612 3'-5' exonuclease J6B58_17515 PF01367 5'-3' exonuclease, C-terminal SAM fold J6B58_17515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J6B58_17520 PF02325 YGGT family J6B58_17525 PF14748 Pyrroline-5-carboxylate reductase dimerisation J6B58_17525 PF03807 NADP oxidoreductase coenzyme F420-dependent J6B58_17530 PF09179 TilS substrate binding domain J6B58_17530 PF11734 TilS substrate C-terminal domain J6B58_17530 PF01171 PP-loop family J6B58_17535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J6B58_17540 PF02541 Ppx/GppA phosphatase family J6B58_17545 PF00085 Thioredoxin J6B58_17550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J6B58_17550 PF07498 Rho termination factor, N-terminal domain J6B58_17550 PF07497 Rho termination factor, RNA-binding domain J6B58_17565 PF00216 Bacterial DNA-binding protein J6B58_17570 PF03483 B3/4 domain J6B58_17570 PF03147 Ferredoxin-fold anticodon binding domain J6B58_17570 PF03484 tRNA synthetase B5 domain J6B58_17570 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J6B58_17570 PF01588 Putative tRNA binding domain J6B58_17575 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J6B58_17575 PF01409 tRNA synthetases class II core domain (F) J6B58_17595 PF00453 Ribosomal protein L20 J6B58_17600 PF01632 Ribosomal protein L35 J6B58_17605 PF07690 Major Facilitator Superfamily J6B58_17610 PF09335 SNARE associated Golgi protein J6B58_17615 PF00043 Glutathione S-transferase, C-terminal domain J6B58_17615 PF02798 Glutathione S-transferase, N-terminal domain J6B58_17620 PF00707 Translation initiation factor IF-3, C-terminal domain J6B58_17620 PF05198 Translation initiation factor IF-3, N-terminal domain J6B58_17625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J6B58_17625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J6B58_17625 PF02824 TGS domain J6B58_17625 PF03129 Anticodon binding domain J6B58_17630 PF00501 AMP-binding enzyme J6B58_17630 PF13193 AMP-binding enzyme C-terminal domain J6B58_17635 PF04751 Protein of unknown function (DUF615) J6B58_17640 PF00381 PTS HPr component phosphorylation site J6B58_17645 PF03668 P-loop ATPase protein family J6B58_17650 PF02569 Pantoate-beta-alanine ligase J6B58_17655 PF02548 Ketopantoate hydroxymethyltransferase J6B58_17660 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J6B58_17665 PF01743 Poly A polymerase head domain J6B58_17665 PF12626 Polymerase A arginine-rich C-terminus J6B58_17665 PF12627 Probable RNA and SrmB- binding site of polymerase A J6B58_17675 PF03819 MazG nucleotide pyrophosphohydrolase domain J6B58_17685 PF04607 Region found in RelA / SpoT proteins J6B58_17685 PF02824 TGS domain J6B58_17685 PF13291 ACT domain J6B58_17690 PF05958 tRNA (Uracil-5-)-methyltransferase J6B58_17700 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_17705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J6B58_17705 PF01627 Hpt domain J6B58_17705 PF00512 His Kinase A (phospho-acceptor) domain J6B58_17705 PF00072 Response regulator receiver domain J6B58_17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_17705 PF00672 HAMP domain J6B58_17710 PF00378 Enoyl-CoA hydratase/isomerase J6B58_17715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J6B58_17715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J6B58_17720 PF01261 Xylose isomerase-like TIM barrel J6B58_17730 PF00106 short chain dehydrogenase J6B58_17735 PF02233 NAD(P) transhydrogenase beta subunit J6B58_17740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J6B58_17745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J6B58_17745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J6B58_17750 PF00892 EamA-like transporter family J6B58_17760 PF07690 Major Facilitator Superfamily J6B58_17780 PF07731 Multicopper oxidase J6B58_17780 PF07732 Multicopper oxidase J6B58_17780 PF00394 Multicopper oxidase J6B58_17790 PF00486 Transcriptional regulatory protein, C terminal J6B58_17790 PF00072 Response regulator receiver domain J6B58_17795 PF00512 His Kinase A (phospho-acceptor) domain J6B58_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_17795 PF00672 HAMP domain J6B58_17800 PF04945 YHS domain J6B58_17880 PF00589 Phage integrase family J6B58_17885 PF01207 Dihydrouridine synthase (Dus) J6B58_17895 PF03466 LysR substrate binding domain J6B58_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_17905 PF00899 ThiF family J6B58_17910 PF00694 Aconitase C-terminal domain J6B58_17910 PF00330 Aconitase family (aconitate hydratase) J6B58_17915 PF01026 TatD related DNase J6B58_17930 PF03144 Elongation factor Tu domain 2 J6B58_17930 PF16658 Class II release factor RF3, C-terminal domain J6B58_17930 PF00009 Elongation factor Tu GTP binding domain J6B58_17955 PF03707 Bacterial signalling protein N terminal repeat J6B58_17955 PF00990 Diguanylate cyclase, GGDEF domain J6B58_17955 PF00563 EAL domain J6B58_17960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J6B58_17960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J6B58_17965 PF10369 Small subunit of acetolactate synthase J6B58_17970 PF00205 Thiamine pyrophosphate enzyme, central domain J6B58_17970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J6B58_17970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J6B58_17980 PF08264 Anticodon-binding domain of tRNA J6B58_17980 PF00133 tRNA synthetases class I (I, L, M and V) J6B58_17980 PF09334 tRNA synthetases class I (M) J6B58_17980 PF13603 Leucyl-tRNA synthetase, Domain 2 J6B58_17995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J6B58_18000 PF12704 MacB-like periplasmic core domain J6B58_18000 PF02687 FtsX-like permease family J6B58_18000 PF00005 ABC transporter J6B58_18005 PF02321 Outer membrane efflux protein J6B58_18020 PF00929 Exonuclease J6B58_18025 PF03193 RsgA GTPase J6B58_18035 PF00462 Glutaredoxin J6B58_18040 PF02556 Preprotein translocase subunit SecB J6B58_18050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J6B58_18050 PF01926 50S ribosome-binding GTPase J6B58_18055 PF13360 PQQ-like domain J6B58_18065 PF03129 Anticodon binding domain J6B58_18065 PF13393 Histidyl-tRNA synthetase J6B58_18070 PF04551 GcpE protein J6B58_18075 PF13464 Domain of unknown function (DUF4115) J6B58_18085 PF04055 Radical SAM superfamily J6B58_18090 PF00334 Nucleoside diphosphate kinase J6B58_18095 PF04384 Iron-sulphur cluster assembly J6B58_18100 PF01569 PAP2 superfamily J6B58_18105 PF13439 Glycosyltransferase Family 4 J6B58_18105 PF00534 Glycosyl transferases group 1 J6B58_18110 PF00595 PDZ domain J6B58_18110 PF03572 Peptidase family S41 J6B58_18110 PF17804 Tail specific protease N-terminal domain J6B58_18110 PF11818 C-terminal domain of tail specific protease (DUF3340) J6B58_18115 PF00933 Glycosyl hydrolase family 3 N terminal domain J6B58_18125 PF00561 alpha/beta hydrolase fold J6B58_18130 PF00171 Aldehyde dehydrogenase family J6B58_18135 PF00171 Aldehyde dehydrogenase family J6B58_18140 PF01202 Shikimate kinase J6B58_18145 PF02447 GntP family permease J6B58_18150 PF01081 KDPG and KHG aldolase J6B58_18155 PF00920 Dehydratase family J6B58_18160 PF00871 Acetokinase family J6B58_18165 PF07085 DRTGG domain J6B58_18165 PF01515 Phosphate acetyl/butaryl transferase J6B58_18170 PF05683 Fumarase C-terminus J6B58_18170 PF05681 Fumarate hydratase (Fumerase) J6B58_18185 PF07724 AAA domain (Cdc48 subfamily) J6B58_18185 PF10431 C-terminal, D2-small domain, of ClpB protein J6B58_18185 PF06689 ClpX C4-type zinc finger J6B58_18190 PF00574 Clp protease J6B58_18195 PF05698 Bacterial trigger factor protein (TF) C-terminus J6B58_18195 PF05697 Bacterial trigger factor protein (TF) J6B58_18195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J6B58_18200 PF07715 TonB-dependent Receptor Plug Domain J6B58_18200 PF00593 TonB dependent receptor J6B58_18205 PF13640 2OG-Fe(II) oxygenase superfamily J6B58_18205 PF18331 PKHD-type hydroxylase C-terminal domain J6B58_18210 PF08502 LeuA allosteric (dimerisation) domain J6B58_18210 PF00682 HMGL-like J6B58_18215 PF00561 alpha/beta hydrolase fold J6B58_18220 PF00561 alpha/beta hydrolase fold J6B58_18220 PF07021 Methionine biosynthesis protein MetW J6B58_18230 PF01725 Ham1 family J6B58_18240 PF02416 mttA/Hcf106 family J6B58_18245 PF02416 mttA/Hcf106 family J6B58_18250 PF00902 Sec-independent protein translocase protein (TatC) J6B58_18270 PF01790 Prolipoprotein diacylglyceryl transferase J6B58_18285 PF00303 Thymidylate synthase J6B58_18290 PF00186 Dihydrofolate reductase J6B58_18300 PF01625 Peptide methionine sulfoxide reductase J6B58_18310 PF01618 MotA/TolQ/ExbB proton channel family J6B58_18320 PF01842 ACT domain J6B58_18320 PF00551 Formyl transferase J6B58_18330 PF00171 Aldehyde dehydrogenase family J6B58_18335 PF00830 Ribosomal L28 family J6B58_18340 PF00471 Ribosomal protein L33 J6B58_18345 PF00999 Sodium/hydrogen exchanger family J6B58_18345 PF02254 TrkA-N domain J6B58_18365 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J6B58_18370 PF13361 UvrD-like helicase C-terminal domain J6B58_18370 PF00580 UvrD/REP helicase N-terminal domain J6B58_18385 PF01396 Topoisomerase DNA binding C4 zinc finger J6B58_18385 PF01751 Toprim domain J6B58_18385 PF01131 DNA topoisomerase J6B58_18385 PF08272 Topoisomerase I zinc-ribbon-like J6B58_18395 PF01638 HxlR-like helix-turn-helix J6B58_18400 PF00107 Zinc-binding dehydrogenase J6B58_18400 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_18405 PF04102 SlyX J6B58_18410 PF12848 ABC transporter J6B58_18410 PF16326 ABC transporter C-terminal domain J6B58_18410 PF00005 ABC transporter J6B58_18415 PF01810 LysE type translocator J6B58_18420 PF03279 Bacterial lipid A biosynthesis acyltransferase J6B58_18430 PF00375 Sodium:dicarboxylate symporter family J6B58_18440 PF02774 Semialdehyde dehydrogenase, dimerisation domain J6B58_18440 PF01118 Semialdehyde dehydrogenase, NAD binding domain J6B58_18460 PF01416 tRNA pseudouridine synthase J6B58_18470 PF01176 Translation initiation factor 1A / IF-1 J6B58_18485 PF00180 Isocitrate/isopropylmalate dehydrogenase J6B58_18495 PF00694 Aconitase C-terminal domain J6B58_18500 PF00330 Aconitase family (aconitate hydratase) J6B58_18510 PF03466 LysR substrate binding domain J6B58_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_18530 PF00293 NUDIX domain J6B58_18535 PF01590 GAF domain J6B58_18535 PF02896 PEP-utilising enzyme, TIM barrel domain J6B58_18535 PF05524 PEP-utilising enzyme, N-terminal J6B58_18535 PF00391 PEP-utilising enzyme, mobile domain J6B58_18540 PF00141 Peroxidase J6B58_18545 PF12706 Beta-lactamase superfamily domain J6B58_18570 PF02798 Glutathione S-transferase, N-terminal domain J6B58_18575 PF08279 HTH domain J6B58_18575 PF13280 WYL domain J6B58_18580 PF13419 Haloacid dehalogenase-like hydrolase J6B58_18585 PF00849 RNA pseudouridylate synthase J6B58_18585 PF01479 S4 domain J6B58_18590 PF00575 S1 RNA binding domain J6B58_18590 PF12111 Polyribonucleotide phosphorylase C terminal J6B58_18590 PF10150 Ribonuclease E/G family J6B58_18595 PF13193 AMP-binding enzyme C-terminal domain J6B58_18595 PF00501 AMP-binding enzyme J6B58_18610 PF03466 LysR substrate binding domain J6B58_18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_18615 PF00106 short chain dehydrogenase J6B58_18620 PF06969 HemN C-terminal domain J6B58_18620 PF04055 Radical SAM superfamily J6B58_18630 PF01554 MatE J6B58_18635 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J6B58_18635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_18635 PF02770 Acyl-CoA dehydrogenase, middle domain J6B58_18640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J6B58_18640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J6B58_18645 PF03109 ABC1 family J6B58_18650 PF01197 Ribosomal protein L31 J6B58_18660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J6B58_18670 PF13247 4Fe-4S dicluster domain J6B58_18670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J6B58_18670 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_18680 PF03884 DNA gyrase inhibitor YacG J6B58_18685 PF00753 Metallo-beta-lactamase superfamily J6B58_18690 PF00762 Ferrochelatase J6B58_18700 PF01177 Asp/Glu/Hydantoin racemase J6B58_18720 PF01206 Sulfurtransferase TusA J6B58_18725 PF03471 Transporter associated domain J6B58_18725 PF00571 CBS domain J6B58_18730 PF00795 Carbon-nitrogen hydrolase J6B58_18735 PF01588 Putative tRNA binding domain J6B58_18745 PF07963 Prokaryotic N-terminal methylation motif J6B58_18745 PF08334 Type II secretion system (T2SS), protein G J6B58_18750 PF00482 Type II secretion system (T2SS), protein F J6B58_18755 PF00270 DEAD/DEAH box helicase J6B58_18755 PF00271 Helicase conserved C-terminal domain J6B58_18755 PF17764 3′ DNA-binding domain (3′BD) J6B58_18755 PF18074 Primosomal protein N C-terminal domain J6B58_18755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J6B58_18760 PF00999 Sodium/hydrogen exchanger family J6B58_18760 PF02254 TrkA-N domain J6B58_18765 PF01430 Hsp33 protein J6B58_18775 PF01556 DnaJ C terminal domain J6B58_18775 PF00226 DnaJ domain J6B58_18785 PF01544 CorA-like Mg2+ transporter protein J6B58_18790 PF00575 S1 RNA binding domain J6B58_18790 PF03725 3' exoribonuclease family, domain 2 J6B58_18790 PF01138 3' exoribonuclease family, domain 1 J6B58_18790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J6B58_18790 PF00013 KH domain J6B58_18795 PF00312 Ribosomal protein S15 J6B58_18800 PF00144 Beta-lactamase J6B58_18805 PF13538 UvrD-like helicase C-terminal domain J6B58_18810 PF00580 UvrD/REP helicase N-terminal domain J6B58_18810 PF12705 PD-(D/E)XK nuclease superfamily J6B58_18810 PF13361 UvrD-like helicase C-terminal domain J6B58_18815 PF17946 RecC C-terminal domain J6B58_18825 PF03976 Polyphosphate kinase 2 (PPK2) J6B58_18835 PF01209 ubiE/COQ5 methyltransferase family J6B58_18845 PF03109 ABC1 family J6B58_18850 PF01494 FAD binding domain J6B58_18855 PF01502 Phosphoribosyl-AMP cyclohydrolase J6B58_18870 PF13244 Domain of unknown function (DUF4040) J6B58_18870 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J6B58_18870 PF00361 Proton-conducting membrane transporter J6B58_18870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J6B58_18875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J6B58_18880 PF00361 Proton-conducting membrane transporter J6B58_18885 PF01899 Na+/H+ ion antiporter subunit J6B58_18890 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J6B58_18895 PF03334 Na+/H+ antiporter subunit J6B58_18900 PF02033 Ribosome-binding factor A J6B58_18905 PF00009 Elongation factor Tu GTP binding domain J6B58_18905 PF11987 Translation-initiation factor 2 J6B58_18905 PF08364 Bacterial translation initiation factor IF-2 associated region J6B58_18905 PF04760 Translation initiation factor IF-2, N-terminal region J6B58_18910 PF00575 S1 RNA binding domain J6B58_18910 PF13184 NusA-like KH domain J6B58_18910 PF08529 NusA N-terminal domain J6B58_18915 PF02576 RimP N-terminal domain J6B58_18915 PF17384 RimP C-terminal SH3 domain J6B58_18935 PF03840 Preprotein translocase SecG subunit J6B58_18940 PF00121 Triosephosphate isomerase J6B58_18945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6B58_18945 PF00437 Type II/IV secretion system protein J6B58_18950 PF00482 Type II secretion system (T2SS), protein F J6B58_18955 PF06750 Bacterial Peptidase A24 N-terminal domain J6B58_18955 PF01478 Type IV leader peptidase family J6B58_18960 PF01121 Dephospho-CoA kinase J6B58_18970 PF00588 SpoU rRNA Methylase family J6B58_18970 PF08032 RNA 2'-O ribose methyltransferase substrate binding J6B58_18975 PF06865 Pyrimidine/purine nucleoside phosphorylase J6B58_18985 PF02463 RecF/RecN/SMC N terminal domain J6B58_18990 PF02622 Uncharacterized ACR, COG1678 J6B58_18995 PF03652 Holliday junction resolvase J6B58_19000 PF13533 Biotin-lipoyl like J6B58_19025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J6B58_19025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J6B58_19025 PF02805 Metal binding domain of Ada J6B58_19025 PF12833 Helix-turn-helix domain J6B58_19030 PF01066 CDP-alcohol phosphatidyltransferase J6B58_19040 PF01541 GIY-YIG catalytic domain J6B58_19040 PF02151 UvrB/uvrC motif J6B58_19040 PF08459 UvrC Helix-hairpin-helix N-terminal J6B58_19055 PF00378 Enoyl-CoA hydratase/isomerase J6B58_19055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J6B58_19055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J6B58_19060 PF02803 Thiolase, C-terminal domain J6B58_19060 PF00108 Thiolase, N-terminal domain J6B58_19085 PF09278 MerR, DNA binding J6B58_19085 PF00376 MerR family regulatory protein J6B58_19095 PF01323 DSBA-like thioredoxin domain J6B58_19110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_19110 PF00183 Hsp90 protein J6B58_19125 PF13726 Na+-H+ antiporter family J6B58_19125 PF03553 Na+/H+ antiporter family J6B58_19130 PF00561 alpha/beta hydrolase fold J6B58_19150 PF04997 RNA polymerase Rpb1, domain 1 J6B58_19150 PF00623 RNA polymerase Rpb1, domain 2 J6B58_19150 PF04983 RNA polymerase Rpb1, domain 3 J6B58_19150 PF05000 RNA polymerase Rpb1, domain 4 J6B58_19150 PF04998 RNA polymerase Rpb1, domain 5 J6B58_19155 PF04563 RNA polymerase beta subunit J6B58_19155 PF04565 RNA polymerase Rpb2, domain 3 J6B58_19155 PF10385 RNA polymerase beta subunit external 1 domain J6B58_19155 PF00562 RNA polymerase Rpb2, domain 6 J6B58_19155 PF04560 RNA polymerase Rpb2, domain 7 J6B58_19155 PF04561 RNA polymerase Rpb2, domain 2 J6B58_19160 PF00542 Ribosomal protein L7/L12 C-terminal domain J6B58_19160 PF16320 Ribosomal protein L7/L12 dimerisation domain J6B58_19165 PF00466 Ribosomal protein L10 J6B58_19170 PF00687 Ribosomal protein L1p/L10e family J6B58_19175 PF00298 Ribosomal protein L11, RNA binding domain J6B58_19175 PF03946 Ribosomal protein L11, N-terminal domain J6B58_19180 PF00467 KOW motif J6B58_19180 PF02357 Transcription termination factor nusG J6B58_19185 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J6B58_19195 PF03144 Elongation factor Tu domain 2 J6B58_19195 PF03143 Elongation factor Tu C-terminal domain J6B58_19195 PF00009 Elongation factor Tu GTP binding domain J6B58_19220 PF00425 chorismate binding enzyme J6B58_19220 PF04715 Anthranilate synthase component I, N terminal region J6B58_19225 PF13419 Haloacid dehalogenase-like hydrolase J6B58_19230 PF00498 FHA domain J6B58_19230 PF12401 Protein of unknown function (DUF2662) J6B58_19235 PF00263 Bacterial type II and III secretion system protein J6B58_19235 PF03958 Bacterial type II/III secretion system short domain J6B58_19250 PF00816 H-NS histone family J6B58_19275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J6B58_19275 PF03900 Porphobilinogen deaminase, C-terminal domain J6B58_19280 PF04397 LytTr DNA-binding domain J6B58_19280 PF00072 Response regulator receiver domain J6B58_19285 PF07694 5TMR of 5TMR-LYT J6B58_19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_19285 PF06580 Histidine kinase J6B58_19290 PF00206 Lyase J6B58_19290 PF14698 Argininosuccinate lyase C-terminal J6B58_19295 PF04362 Bacterial Fe(2+) trafficking J6B58_19300 PF01895 PhoU domain J6B58_19305 PF02321 Outer membrane efflux protein J6B58_19310 PF00892 EamA-like transporter family J6B58_19325 PF13667 ThiC-associated domain J6B58_19325 PF01964 Radical SAM ThiC family J6B58_19330 PF00293 NUDIX domain J6B58_19335 PF00149 Calcineurin-like phosphoesterase J6B58_19340 PF01258 Prokaryotic dksA/traR C4-type zinc finger J6B58_19345 PF00749 tRNA synthetases class I (E and Q), catalytic domain J6B58_19350 PF01098 Cell cycle protein J6B58_19355 PF02875 Mur ligase family, glutamate ligase domain J6B58_19355 PF08245 Mur ligase middle domain J6B58_19365 PF02421 Ferrous iron transport protein B J6B58_19365 PF07664 Ferrous iron transport protein B C terminus J6B58_19365 PF07670 Nucleoside recognition J6B58_19375 PF02899 Phage integrase, N-terminal SAM-like domain J6B58_19375 PF00589 Phage integrase family J6B58_19380 PF10411 Disulfide bond isomerase protein N-terminus J6B58_19380 PF13098 Thioredoxin-like domain J6B58_19385 PF03447 Homoserine dehydrogenase, NAD binding domain J6B58_19385 PF00742 Homoserine dehydrogenase J6B58_19385 PF01842 ACT domain J6B58_19390 PF00291 Pyridoxal-phosphate dependent enzyme J6B58_19395 PF00768 D-alanyl-D-alanine carboxypeptidase J6B58_19400 PF00196 Bacterial regulatory proteins, luxR family J6B58_19400 PF00072 Response regulator receiver domain J6B58_19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J6B58_19405 PF00512 His Kinase A (phospho-acceptor) domain J6B58_19410 PF00158 Sigma-54 interaction domain J6B58_19410 PF00072 Response regulator receiver domain J6B58_19410 PF02954 Bacterial regulatory protein, Fis family J6B58_19415 PF00595 PDZ domain J6B58_19415 PF03572 Peptidase family S41 J6B58_19420 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J6B58_19420 PF01676 Metalloenzyme superfamily J6B58_19425 PF03739 Lipopolysaccharide export system permease LptF/LptG J6B58_19435 PF00883 Cytosol aminopeptidase family, catalytic domain J6B58_19435 PF02789 Cytosol aminopeptidase family, N-terminal domain J6B58_19455 PF00677 Lumazine binding domain J6B58_19465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J6B58_19465 PF01872 RibD C-terminal domain J6B58_19470 PF03477 ATP cone domain J6B58_19475 PF00909 Ammonium Transporter Family J6B58_19480 PF00543 Nitrogen regulatory protein P-II J6B58_19505 PF01636 Phosphotransferase enzyme family J6B58_19510 PF12848 ABC transporter J6B58_19510 PF00005 ABC transporter J6B58_19530 PF07091 Ribosomal RNA methyltransferase (FmrO) J6B58_19550 PF00809 Pterin binding enzyme J6B58_19580 PF00809 Pterin binding enzyme J6B58_19585 PF00893 Small Multidrug Resistance protein J6B58_19590 PF07690 Major Facilitator Superfamily J6B58_19605 PF13610 DDE domain J6B58_19665 PF08535 KorB domain J6B58_19665 PF06613 KorB C-terminal beta-barrel domain J6B58_19665 PF02195 ParB-like nuclease domain J6B58_19670 PF13614 AAA domain J6B58_19680 PF00809 Pterin binding enzyme J6B58_19700 PF00186 Dihydrofolate reductase J6B58_19705 PF00303 Thymidylate synthase J6B58_19725 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase J6B58_19730 PF01636 Phosphotransferase enzyme family J6B58_19745 PF01751 Toprim domain J6B58_19745 PF01131 DNA topoisomerase J6B58_19745 PF01396 Topoisomerase DNA binding C4 zinc finger J6B58_19810 PF13610 DDE domain J6B58_19815 PF08240 Alcohol dehydrogenase GroES-like domain J6B58_19815 PF00107 Zinc-binding dehydrogenase J6B58_19820 PF02583 Metal-sensitive transcriptional repressor J6B58_19840 PF00355 Rieske [2Fe-2S] domain J6B58_19850 PF03171 2OG-Fe(II) oxygenase superfamily J6B58_19850 PF14226 non-haem dioxygenase in morphine synthesis N-terminal J6B58_19885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J6B58_19885 PF03466 LysR substrate binding domain J6B58_19895 PF13610 DDE domain J6B58_19900 PF02796 Helix-turn-helix domain of resolvase J6B58_19900 PF00239 Resolvase, N terminal domain J6B58_19910 PF13087 AAA domain J6B58_19910 PF13195 Protein of unknown function (DUF4011) J6B58_19910 PF13086 AAA domain J6B58_19920 PF00916 Sulfate permease family J6B58_19920 PF01740 STAS domain J6B58_19925 PF13610 DDE domain J6B58_19975 PF13635 Domain of unknown function (DUF4143) J6B58_19975 PF13173 AAA domain J6B58_19985 PF00239 Resolvase, N terminal domain J6B58_19985 PF02796 Helix-turn-helix domain of resolvase J6B58_19990 PF01526 Tn3 transposase DDE domain J6B58_19990 PF13700 Domain of unknown function (DUF4158) J6B58_20015 PF17932 Tetracyclin repressor-like, C-terminal domain J6B58_20015 PF00440 Bacterial regulatory proteins, tetR family J6B58_20030 PF07992 Pyridine nucleotide-disulphide oxidoreductase J6B58_20030 PF14759 Reductase C-terminal J6B58_20035 PF00067 Cytochrome P450 J6B58_20040 PF00111 2Fe-2S iron-sulfur cluster binding domain J6B58_20045 PF12833 Helix-turn-helix domain J6B58_20045 PF02311 AraC-like ligand binding domain J6B58_20050 PF00239 Resolvase, N terminal domain J6B58_20050 PF02796 Helix-turn-helix domain of resolvase J6B58_20055 PF01695 IstB-like ATP binding protein J6B58_20065 PF13610 DDE domain J6B58_20200 PF00437 Type II/IV secretion system protein J6B58_20200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J6B58_20250 PF13614 AAA domain J6B58_20255 PF17762 HTH domain found in ParB protein J6B58_20255 PF02195 ParB-like nuclease domain J6B58_20260 PF11798 IMS family HHH motif J6B58_20260 PF00817 impB/mucB/samB family J6B58_20260 PF13438 Domain of unknown function (DUF4113) J6B58_20260 PF11799 impB/mucB/samB family C-terminal domain J6B58_20265 PF00717 Peptidase S24-like J6B58_20300 PF04225 Opacity-associated protein A LysM-like domain J6B58_20300 PF01551 Peptidase family M23 J6B58_20535 PF01435 Peptidase family M48 J6B58_20570 PF02899 Phage integrase, N-terminal SAM-like domain J6B58_20570 PF00589 Phage integrase family J6B58_20640 PF00565 Staphylococcal nuclease homologue J6B58_20645 PF00816 H-NS histone family J6B58_20695 PF13614 AAA domain J6B58_20700 PF02195 ParB-like nuclease domain J6B58_20700 PF17762 HTH domain found in ParB protein J6B58_20715 PF05816 Toxic anion resistance protein (TelA) J6B58_20800 PF01556 DnaJ C terminal domain J6B58_20800 PF00226 DnaJ domain J6B58_20800 PF00684 DnaJ central domain J6B58_20825 PF00665 Integrase core domain J6B58_20855 PF00582 Universal stress protein family J6B58_20860 PF01740 STAS domain J6B58_20860 PF00916 Sulfate permease family J6B58_20885 PF00905 Penicillin binding protein transpeptidase domain J6B58_20915 PF18340 DNA relaxase TraI 2B/2B-like domain J6B58_20915 PF08751 TrwC relaxase J6B58_20915 PF07057 DNA helicase TraI J6B58_20915 PF18272 single-stranded DNA binding TraI N-terminal subdomain J6B58_20945 PF00665 Integrase core domain J6B58_20945 PF13936 Helix-turn-helix domain J6B58_20950 PF01636 Phosphotransferase enzyme family J6B58_20955 PF13936 Helix-turn-helix domain J6B58_20955 PF00665 Integrase core domain J6B58_20965 PF02796 Helix-turn-helix domain of resolvase J6B58_20965 PF00239 Resolvase, N terminal domain J6B58_20980 PF01464 Transglycosylase SLT domain J6B58_21015 PF10411 Disulfide bond isomerase protein N-terminus J6B58_21015 PF13098 Thioredoxin-like domain J6B58_21050 PF06834 TraU protein J6B58_21060 PF06986 Type-1V conjugative transfer system mating pair stabilisation J6B58_21075 PF06122 Conjugative relaxosome accessory transposon protein J6B58_21100 PF11799 impB/mucB/samB family C-terminal domain J6B58_21100 PF11798 IMS family HHH motif J6B58_21100 PF13438 Domain of unknown function (DUF4113) J6B58_21100 PF00817 impB/mucB/samB family J6B58_21135 PF05973 Phage derived protein Gp49-like (DUF891) J6B58_21190 PF03389 MobA/MobL family J6B58_21210 PF01636 Phosphotransferase enzyme family