locus-tag class description LDO71_00005 PF00308 Bacterial dnaA protein LDO71_00005 PF08299 Bacterial dnaA protein helix-turn-helix LDO71_00005 PF11638 DnaA N-terminal domain LDO71_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDO71_00010 PF02767 DNA polymerase III beta subunit, central domain LDO71_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDO71_00015 PF02463 RecF/RecN/SMC N terminal domain LDO71_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_00020 PF18053 DNA gyrase B subunit insert domain LDO71_00020 PF01751 Toprim domain LDO71_00020 PF00204 DNA gyrase B LDO71_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LDO71_00030 PF09335 SNARE associated Golgi protein LDO71_00035 PF00005 ABC transporter LDO71_00035 PF12848 ABC transporter LDO71_00055 PF01521 Iron-sulphur cluster biosynthesis LDO71_00060 PF00561 alpha/beta hydrolase fold LDO71_00065 PF03702 Anhydro-N-acetylmuramic acid kinase LDO71_00070 PF00579 tRNA synthetases class I (W and Y) LDO71_00110 PF00209 Sodium:neurotransmitter symporter family LDO71_00120 PF01029 NusB family LDO71_00120 PF01189 16S rRNA methyltransferase RsmB/F LDO71_00125 PF00551 Formyl transferase LDO71_00125 PF02911 Formyl transferase, C-terminal domain LDO71_00130 PF00920 Dehydratase family LDO71_00145 PF03466 LysR substrate binding domain LDO71_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_00150 PF00860 Permease family LDO71_00155 PF00311 Phosphoenolpyruvate carboxylase LDO71_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region LDO71_00160 PF00440 Bacterial regulatory proteins, tetR family LDO71_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_00170 PF00873 AcrB/AcrD/AcrF family LDO71_00180 PF00684 DnaJ central domain LDO71_00180 PF01556 DnaJ C terminal domain LDO71_00180 PF00226 DnaJ domain LDO71_00190 PF01113 Dihydrodipicolinate reductase, N-terminus LDO71_00190 PF05173 Dihydrodipicolinate reductase, C-terminus LDO71_00200 PF07690 Major Facilitator Superfamily LDO71_00205 PF00248 Aldo/keto reductase family LDO71_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_00210 PF03466 LysR substrate binding domain LDO71_00225 PF00392 Bacterial regulatory proteins, gntR family LDO71_00225 PF00155 Aminotransferase class I and II LDO71_00230 PF00107 Zinc-binding dehydrogenase LDO71_00230 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_00235 PF03352 Methyladenine glycosylase LDO71_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein LDO71_00250 PF14815 NUDIX domain LDO71_00250 PF10576 Iron-sulfur binding domain of endonuclease III LDO71_00250 PF00633 Helix-hairpin-helix motif LDO71_00265 PF07043 Protein of unknown function (DUF1328) LDO71_00270 PF03692 Putative zinc- or iron-chelating domain LDO71_00280 PF16193 AAA C-terminal domain LDO71_00280 PF12002 MgsA AAA+ ATPase C terminal LDO71_00280 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_00285 PF01226 Formate/nitrite transporter LDO71_00295 PF01259 SAICAR synthetase LDO71_00305 PF00701 Dihydrodipicolinate synthetase family LDO71_00310 PF00857 Isochorismatase family LDO71_00315 PF01758 Sodium Bile acid symporter family LDO71_00320 PF01554 MatE LDO71_00325 PF04463 Protein of unknown function (DUF523) LDO71_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDO71_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDO71_00345 PF02798 Glutathione S-transferase, N-terminal domain LDO71_00345 PF14497 Glutathione S-transferase, C-terminal domain LDO71_00355 PF00324 Amino acid permease LDO71_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain LDO71_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDO71_00375 PF00392 Bacterial regulatory proteins, gntR family LDO71_00375 PF07702 UTRA domain LDO71_00380 PF05962 HutD LDO71_00385 PF01175 Urocanase Rossmann-like domain LDO71_00385 PF17392 Urocanase C-terminal domain LDO71_00385 PF17391 Urocanase N-terminal domain LDO71_00390 PF00221 Aromatic amino acid lyase LDO71_00395 PF00324 Amino acid permease LDO71_00400 PF01979 Amidohydrolase family LDO71_00405 PF00491 Arginase family LDO71_00415 PF13419 Haloacid dehalogenase-like hydrolase LDO71_00420 PF01177 Asp/Glu/Hydantoin racemase LDO71_00435 PF01380 SIS domain LDO71_00440 PF14602 Hexapeptide repeat of succinyl-transferase LDO71_00440 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_00440 PF12804 MobA-like NTP transferase domain LDO71_00445 PF04608 Phosphatidylglycerophosphatase A LDO71_00450 PF00586 AIR synthase related protein, N-terminal domain LDO71_00450 PF02769 AIR synthase related protein, C-terminal domain LDO71_00455 PF01029 NusB family LDO71_00460 PF00885 6,7-dimethyl-8-ribityllumazine synthase LDO71_00465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDO71_00465 PF00925 GTP cyclohydrolase II LDO71_00490 PF02580 D-Tyr-tRNA(Tyr) deacylase LDO71_00495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LDO71_00495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDO71_00500 PF00581 Rhodanese-like domain LDO71_00505 PF02666 Phosphatidylserine decarboxylase LDO71_00515 PF00989 PAS fold LDO71_00515 PF11808 Phosphate regulon sensor protein PhoR LDO71_00515 PF00512 His Kinase A (phospho-acceptor) domain LDO71_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_00520 PF00072 Response regulator receiver domain LDO71_00520 PF00486 Transcriptional regulatory protein, C terminal LDO71_00530 PF00106 short chain dehydrogenase LDO71_00535 PF01554 MatE LDO71_00540 PF00155 Aminotransferase class I and II LDO71_00545 PF04286 Protein of unknown function (DUF445) LDO71_00560 PF04262 Glutamate-cysteine ligase LDO71_00565 PF02600 Disulfide bond formation protein DsbB LDO71_00570 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDO71_00570 PF04717 Type VI secretion system, phage-baseplate injector LDO71_00570 PF13296 Putative type VI secretion system Rhs element Vgr LDO71_00580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDO71_00580 PF10135 Rod binding protein LDO71_00595 PF05728 Uncharacterised protein family (UPF0227) LDO71_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_00600 PF00986 DNA gyrase B subunit, carboxyl terminus LDO71_00600 PF00204 DNA gyrase B LDO71_00600 PF01751 Toprim domain LDO71_00605 PF00106 short chain dehydrogenase LDO71_00610 PF04115 Ureidoglycolate lyase LDO71_00615 PF03561 Allantoicase repeat LDO71_00620 PF01494 FAD binding domain LDO71_00630 PF00860 Permease family LDO71_00635 PF00576 HIUase/Transthyretin family LDO71_00665 PF02683 Cytochrome C biogenesis protein transmembrane region LDO71_00665 PF11412 Disulphide bond corrector protein DsbC LDO71_00670 PF00990 Diguanylate cyclase, GGDEF domain LDO71_00670 PF07694 5TMR of 5TMR-LYT LDO71_00675 PF07859 alpha/beta hydrolase fold LDO71_00685 PF03960 ArsC family LDO71_00690 PF03372 Endonuclease/Exonuclease/phosphatase family LDO71_00695 PF00156 Phosphoribosyl transferase domain LDO71_00700 PF07715 TonB-dependent Receptor Plug Domain LDO71_00700 PF00593 TonB dependent receptor LDO71_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LDO71_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LDO71_00715 PF03033 Glycosyltransferase family 28 N-terminal domain LDO71_00715 PF04101 Glycosyltransferase family 28 C-terminal domain LDO71_00720 PF08245 Mur ligase middle domain LDO71_00720 PF02875 Mur ligase family, glutamate ligase domain LDO71_00720 PF01225 Mur ligase family, catalytic domain LDO71_00725 PF01820 D-ala D-ala ligase N-terminus LDO71_00725 PF07478 D-ala D-ala ligase C-terminus LDO71_00730 PF08478 POTRA domain, FtsQ-type LDO71_00730 PF03799 Cell division protein FtsQ LDO71_00735 PF02491 SHS2 domain inserted in FTSA LDO71_00740 PF12327 FtsZ family, C-terminal domain LDO71_00740 PF00091 Tubulin/FtsZ family, GTPase domain LDO71_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LDO71_00755 PF01551 Peptidase family M23 LDO71_00760 PF00456 Transketolase, thiamine diphosphate binding domain LDO71_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain LDO71_00765 PF02817 e3 binding domain LDO71_00765 PF00364 Biotin-requiring enzyme LDO71_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDO71_00775 PF01169 Uncharacterized protein family UPF0016 LDO71_00780 PF00593 TonB dependent receptor LDO71_00780 PF07715 TonB-dependent Receptor Plug Domain LDO71_00785 PF00258 Flavodoxin LDO71_00785 PF01613 Flavin reductase like domain LDO71_00790 PF03692 Putative zinc- or iron-chelating domain LDO71_00795 PF00478 IMP dehydrogenase / GMP reductase domain LDO71_00795 PF00571 CBS domain LDO71_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO71_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO71_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO71_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO71_00805 PF01243 Pyridoxamine 5'-phosphate oxidase LDO71_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LDO71_00810 PF17768 RecJ OB domain LDO71_00810 PF01368 DHH family LDO71_00810 PF02272 DHHA1 domain LDO71_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO71_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LDO71_00840 PF04452 RNA methyltransferase LDO71_00845 PF00924 Mechanosensitive ion channel LDO71_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus LDO71_00855 PF00501 AMP-binding enzyme LDO71_00855 PF13193 AMP-binding enzyme C-terminal domain LDO71_00860 PF00857 Isochorismatase family LDO71_00865 PF01037 Lrp/AsnC ligand binding domain LDO71_00870 PF00296 Luciferase-like monooxygenase LDO71_00875 PF03358 NADPH-dependent FMN reductase LDO71_00880 PF00072 Response regulator receiver domain LDO71_00880 PF00196 Bacterial regulatory proteins, luxR family LDO71_00890 PF00672 HAMP domain LDO71_00890 PF01627 Hpt domain LDO71_00890 PF00072 Response regulator receiver domain LDO71_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_00890 PF00512 His Kinase A (phospho-acceptor) domain LDO71_00895 PF04341 Protein of unknown function, DUF485 LDO71_00900 PF00474 Sodium:solute symporter family LDO71_00910 PF02028 BCCT, betaine/carnitine/choline family transporter LDO71_00920 PF00990 Diguanylate cyclase, GGDEF domain LDO71_00925 PF17755 UvrA DNA-binding domain LDO71_00925 PF17760 UvrA interaction domain LDO71_00930 PF16925 Tetracyclin repressor-like, C-terminal domain LDO71_00930 PF00440 Bacterial regulatory proteins, tetR family LDO71_00935 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_00935 PF00107 Zinc-binding dehydrogenase LDO71_00945 PF06942 GlpM protein LDO71_00950 PF08543 Phosphomethylpyrimidine kinase LDO71_00950 PF03070 TENA/THI-4/PQQC family LDO71_00950 PF02581 Thiamine monophosphate synthase LDO71_00960 PF07690 Major Facilitator Superfamily LDO71_00965 PF00436 Single-strand binding protein family LDO71_01010 PF03591 AzlC protein LDO71_01020 PF00324 Amino acid permease LDO71_01025 PF00392 Bacterial regulatory proteins, gntR family LDO71_01025 PF00155 Aminotransferase class I and II LDO71_01030 PF00202 Aminotransferase class-III LDO71_01035 PF00171 Aldehyde dehydrogenase family LDO71_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_01045 PF00857 Isochorismatase family LDO71_01050 PF05726 Pirin C-terminal cupin domain LDO71_01050 PF02678 Pirin LDO71_01055 PF01593 Flavin containing amine oxidoreductase LDO71_01075 PF07690 Major Facilitator Superfamily LDO71_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_01080 PF03466 LysR substrate binding domain LDO71_01100 PF00999 Sodium/hydrogen exchanger family LDO71_01110 PF00873 AcrB/AcrD/AcrF family LDO71_01115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_01115 PF00529 HlyD membrane-fusion protein of T1SS LDO71_01120 PF00440 Bacterial regulatory proteins, tetR family LDO71_01140 PF00248 Aldo/keto reductase family LDO71_01145 PF12833 Helix-turn-helix domain LDO71_01145 PF02311 AraC-like ligand binding domain LDO71_01175 PF01638 HxlR-like helix-turn-helix LDO71_01205 PF02705 K+ potassium transporter LDO71_01230 PF00230 Major intrinsic protein LDO71_01245 PF00977 Histidine biosynthesis protein LDO71_01250 PF01636 Phosphotransferase enzyme family LDO71_01275 PF00005 ABC transporter LDO71_01275 PF00664 ABC transporter transmembrane region LDO71_01280 PF00977 Histidine biosynthesis protein LDO71_01295 PF00117 Glutamine amidotransferase class-I LDO71_01300 PF00475 Imidazoleglycerol-phosphate dehydratase LDO71_01320 PF00583 Acetyltransferase (GNAT) family LDO71_01325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LDO71_01325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LDO71_01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_01335 PF00672 HAMP domain LDO71_01335 PF00512 His Kinase A (phospho-acceptor) domain LDO71_01340 PF00072 Response regulator receiver domain LDO71_01340 PF00486 Transcriptional regulatory protein, C terminal LDO71_01345 PF17674 HHH domain LDO71_01345 PF00575 S1 RNA binding domain LDO71_01345 PF09371 Tex-like protein N-terminal domain LDO71_01345 PF16921 Tex protein YqgF-like domain LDO71_01350 PF00916 Sulfate permease family LDO71_01350 PF01740 STAS domain LDO71_01355 PF00106 short chain dehydrogenase LDO71_01375 PF12833 Helix-turn-helix domain LDO71_01380 PF01053 Cys/Met metabolism PLP-dependent enzyme LDO71_01385 PF00005 ABC transporter LDO71_01385 PF12848 ABC transporter LDO71_01410 PF00529 HlyD membrane-fusion protein of T1SS LDO71_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_01415 PF00873 AcrB/AcrD/AcrF family LDO71_01420 PF01545 Cation efflux family LDO71_01450 PF00324 Amino acid permease LDO71_01465 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDO71_01480 PF01795 MraW methylase family LDO71_01490 PF03717 Penicillin-binding Protein dimerisation domain LDO71_01490 PF00905 Penicillin binding protein transpeptidase domain LDO71_01495 PF01225 Mur ligase family, catalytic domain LDO71_01495 PF02875 Mur ligase family, glutamate ligase domain LDO71_01495 PF08245 Mur ligase middle domain LDO71_01500 PF01225 Mur ligase family, catalytic domain LDO71_01500 PF08245 Mur ligase middle domain LDO71_01500 PF02875 Mur ligase family, glutamate ligase domain LDO71_01505 PF00953 Glycosyl transferase family 4 LDO71_01515 PF13847 Methyltransferase domain LDO71_01520 PF17092 Penicillin-binding protein OB-like domain LDO71_01520 PF00912 Transglycosylase LDO71_01520 PF00905 Penicillin binding protein transpeptidase domain LDO71_01525 PF11104 Type IV pilus assembly protein PilM; LDO71_01530 PF05137 Fimbrial assembly protein (PilN) LDO71_01535 PF04350 Pilus assembly protein, PilO LDO71_01545 PF11741 AMIN domain LDO71_01545 PF00263 Bacterial type II and III secretion system protein LDO71_01545 PF03958 Bacterial type II/III secretion system short domain LDO71_01545 PF07660 Secretin and TonB N terminus short domain LDO71_01550 PF01202 Shikimate kinase LDO71_01555 PF01761 3-dehydroquinate synthase LDO71_01565 PF00310 Glutamine amidotransferases class-II LDO71_01565 PF04898 Glutamate synthase central domain LDO71_01565 PF01645 Conserved region in glutamate synthase LDO71_01565 PF01493 GXGXG motif LDO71_01570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDO71_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_01580 PF04011 LemA family LDO71_01585 PF04536 TPM domain LDO71_01595 PF07963 Prokaryotic N-terminal methylation motif LDO71_01595 PF00114 Pilin (bacterial filament) LDO71_01605 PF15864 Protein glycosylation ligase LDO71_01605 PF04932 O-Antigen ligase LDO71_01605 PF11846 Virulence factor membrane-bound polymerase, C-terminal LDO71_01610 PF00210 Ferritin-like domain LDO71_01615 PF04324 BFD-like [2Fe-2S] binding domain LDO71_01620 PF01042 Endoribonuclease L-PSP LDO71_01625 PF04607 Region found in RelA / SpoT proteins LDO71_01625 PF02824 TGS domain LDO71_01625 PF13291 ACT domain LDO71_01635 PF01192 RNA polymerase Rpb6 LDO71_01640 PF00625 Guanylate kinase LDO71_01645 PF02401 LytB protein LDO71_01655 PF07963 Prokaryotic N-terminal methylation motif LDO71_01655 PF00114 Pilin (bacterial filament) LDO71_01690 PF00886 Ribosomal protein S16 LDO71_01695 PF01782 RimM N-terminal domain LDO71_01695 PF05239 PRC-barrel domain LDO71_01700 PF01746 tRNA (Guanine-1)-methyltransferase LDO71_01705 PF01245 Ribosomal protein L19 LDO71_01710 PF00561 alpha/beta hydrolase fold LDO71_01715 PF03280 Proteobacterial lipase chaperone protein LDO71_01720 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDO71_01720 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDO71_01720 PF09157 Pseudouridine synthase II TruB, C-terminal LDO71_01725 PF01925 Sulfite exporter TauE/SafE LDO71_01735 PF00892 EamA-like transporter family LDO71_01740 PF00892 EamA-like transporter family LDO71_01745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO71_01745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO71_01750 PF02913 FAD linked oxidases, C-terminal domain LDO71_01750 PF01565 FAD binding domain LDO71_01760 PF03992 Antibiotic biosynthesis monooxygenase LDO71_01765 PF02525 Flavodoxin-like fold LDO71_01775 PF07690 Major Facilitator Superfamily LDO71_01780 PF12805 FUSC-like inner membrane protein yccS LDO71_01785 PF00080 Copper/zinc superoxide dismutase (SODC) LDO71_01790 PF01594 AI-2E family transporter LDO71_01795 PF13614 AAA domain LDO71_01815 PF08241 Methyltransferase domain LDO71_01825 PF00324 Amino acid permease LDO71_01830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LDO71_01830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LDO71_01835 PF00202 Aminotransferase class-III LDO71_01840 PF04958 Arginine N-succinyltransferase beta subunit LDO71_01845 PF00171 Aldehyde dehydrogenase family LDO71_01850 PF04996 Succinylarginine dihydrolase LDO71_01855 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LDO71_01870 PF00082 Subtilase family LDO71_01870 PF05922 Peptidase inhibitor I9 LDO71_01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_01885 PF03466 LysR substrate binding domain LDO71_01890 PF00892 EamA-like transporter family LDO71_01900 PF05746 DALR anticodon binding domain LDO71_01900 PF02092 Glycyl-tRNA synthetase beta subunit LDO71_01905 PF02091 Glycyl-tRNA synthetase alpha subunit LDO71_01910 PF07690 Major Facilitator Superfamily LDO71_01925 PF00571 CBS domain LDO71_01930 PF04024 PspC domain LDO71_01940 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO71_01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_01940 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_01940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_01950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LDO71_01950 PF08501 Shikimate dehydrogenase substrate binding domain LDO71_01950 PF01488 Shikimate / quinate 5-dehydrogenase LDO71_01955 PF01218 Coproporphyrinogen III oxidase LDO71_01960 PF00925 GTP cyclohydrolase II LDO71_01965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDO71_01965 PF02779 Transketolase, pyrimidine binding domain LDO71_01965 PF02780 Transketolase, C-terminal domain LDO71_01970 PF00459 Inositol monophosphatase family LDO71_01975 PF12343 Cold shock protein DEAD box A LDO71_01975 PF00270 DEAD/DEAH box helicase LDO71_01975 PF03880 DbpA RNA binding domain LDO71_01975 PF00271 Helicase conserved C-terminal domain LDO71_01985 PF00005 ABC transporter LDO71_01990 PF02405 Permease MlaE LDO71_02000 PF05494 MlaC protein LDO71_02010 PF01544 CorA-like Mg2+ transporter protein LDO71_02015 PF03641 Possible lysine decarboxylase LDO71_02020 PF00293 NUDIX domain LDO71_02025 PF00156 Phosphoribosyl transferase domain LDO71_02030 PF00270 DEAD/DEAH box helicase LDO71_02030 PF00271 Helicase conserved C-terminal domain LDO71_02030 PF17191 RecG wedge domain LDO71_02045 PF01553 Acyltransferase LDO71_02055 PF00375 Sodium:dicarboxylate symporter family LDO71_02065 PF01926 50S ribosome-binding GTPase LDO71_02070 PF02082 Transcriptional regulator LDO71_02075 PF00042 Globin LDO71_02075 PF00175 Oxidoreductase NAD-binding domain LDO71_02075 PF00970 Oxidoreductase FAD-binding domain LDO71_02080 PF05872 Bacterial protein of unknown function (DUF853) LDO71_02085 PF01053 Cys/Met metabolism PLP-dependent enzyme LDO71_02090 PF00117 Glutamine amidotransferase class-I LDO71_02095 PF00338 Ribosomal protein S10p/S20e LDO71_02100 PF00297 Ribosomal protein L3 LDO71_02105 PF00573 Ribosomal protein L4/L1 family LDO71_02110 PF00276 Ribosomal protein L23 LDO71_02115 PF00181 Ribosomal Proteins L2, RNA binding domain LDO71_02115 PF03947 Ribosomal Proteins L2, C-terminal domain LDO71_02120 PF00203 Ribosomal protein S19 LDO71_02125 PF00237 Ribosomal protein L22p/L17e LDO71_02135 PF00252 Ribosomal protein L16p/L10e LDO71_02140 PF00831 Ribosomal L29 protein LDO71_02145 PF00366 Ribosomal protein S17 LDO71_02150 PF00238 Ribosomal protein L14p/L23e LDO71_02155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDO71_02155 PF00467 KOW motif LDO71_02160 PF00281 Ribosomal protein L5 LDO71_02160 PF00673 ribosomal L5P family C-terminus LDO71_02165 PF00253 Ribosomal protein S14p/S29e LDO71_02170 PF00410 Ribosomal protein S8 LDO71_02175 PF00347 Ribosomal protein L6 LDO71_02180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDO71_02185 PF03719 Ribosomal protein S5, C-terminal domain LDO71_02185 PF00333 Ribosomal protein S5, N-terminal domain LDO71_02190 PF00327 Ribosomal protein L30p/L7e LDO71_02195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDO71_02200 PF00344 SecY translocase LDO71_02205 PF00444 Ribosomal protein L36 LDO71_02210 PF00416 Ribosomal protein S13/S18 LDO71_02215 PF00411 Ribosomal protein S11 LDO71_02220 PF01479 S4 domain LDO71_02220 PF00163 Ribosomal protein S4/S9 N-terminal domain LDO71_02225 PF01000 RNA polymerase Rpb3/RpoA insert domain LDO71_02225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDO71_02225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDO71_02230 PF01196 Ribosomal protein L17 LDO71_02235 PF00743 Flavin-binding monooxygenase-like LDO71_02240 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_02245 PF03937 Flavinator of succinate dehydrogenase LDO71_02275 PF09526 Probable metal-binding protein (DUF2387) LDO71_02280 PF01432 Peptidase family M3 LDO71_02285 PF17876 Cold shock domain LDO71_02285 PF08461 Ribonuclease R winged-helix domain LDO71_02285 PF08206 Ribonuclease B OB domain LDO71_02285 PF00575 S1 RNA binding domain LDO71_02285 PF00773 RNB domain LDO71_02330 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDO71_02335 PF12833 Helix-turn-helix domain LDO71_02340 PF00892 EamA-like transporter family LDO71_02345 PF03631 Virulence factor BrkB LDO71_02350 PF03358 NADPH-dependent FMN reductase LDO71_02375 PF02130 Uncharacterized protein family UPF0054 LDO71_02380 PF02562 PhoH-like protein LDO71_02385 PF04055 Radical SAM superfamily LDO71_02385 PF01938 TRAM domain LDO71_02385 PF00919 Uncharacterized protein family UPF0004 LDO71_02390 PF01551 Peptidase family M23 LDO71_02390 PF10145 Phage-related minor tail protein LDO71_02390 PF01464 Transglycosylase SLT domain LDO71_02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDO71_02400 PF00056 lactate/malate dehydrogenase, NAD binding domain LDO71_02420 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LDO71_02425 PF01066 CDP-alcohol phosphatidyltransferase LDO71_02470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_02470 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_02470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_02475 PF17932 Tetracyclin repressor-like, C-terminal domain LDO71_02475 PF00440 Bacterial regulatory proteins, tetR family LDO71_02490 PF01039 Carboxyl transferase domain LDO71_02495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_02495 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_02495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_02500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO71_02500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO71_02500 PF00378 Enoyl-CoA hydratase/isomerase LDO71_02505 PF02785 Biotin carboxylase C-terminal domain LDO71_02505 PF00289 Biotin carboxylase, N-terminal domain LDO71_02505 PF00364 Biotin-requiring enzyme LDO71_02505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO71_02515 PF04386 Stringent starvation protein B LDO71_02520 PF00043 Glutathione S-transferase, C-terminal domain LDO71_02520 PF13417 Glutathione S-transferase, N-terminal domain LDO71_02525 PF00380 Ribosomal protein S9/S16 LDO71_02530 PF00572 Ribosomal protein L13 LDO71_02535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LDO71_02540 PF00398 Ribosomal RNA adenine dimethylase LDO71_02545 PF00149 Calcineurin-like phosphoesterase LDO71_02565 PF16360 GTP-binding GTPase Middle Region LDO71_02565 PF13167 GTP-binding GTPase N-terminal LDO71_02565 PF01926 50S ribosome-binding GTPase LDO71_02575 PF13091 PLD-like domain LDO71_02580 PF00149 Calcineurin-like phosphoesterase LDO71_02580 PF10518 TAT (twin-arginine translocation) pathway signal sequence LDO71_02585 PF00691 OmpA family LDO71_02585 PF01389 OmpA-like transmembrane domain LDO71_02590 PF17152 Periplasmic sensor domain LDO71_02590 PF00990 Diguanylate cyclase, GGDEF domain LDO71_02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_02625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO71_02635 PF00753 Metallo-beta-lactamase superfamily LDO71_02635 PF04273 Putative phosphatase (DUF442) LDO71_02640 PF00561 alpha/beta hydrolase fold LDO71_02645 PF00085 Thioredoxin LDO71_02650 PF03061 Thioesterase superfamily LDO71_02660 PF04461 Protein of unknown function (DUF520) LDO71_02670 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LDO71_02670 PF01266 FAD dependent oxidoreductase LDO71_02680 PF03795 YCII-related domain LDO71_02685 PF04279 Intracellular septation protein A LDO71_02690 PF02811 PHP domain LDO71_02695 PF01062 Bestrophin, RFP-TM, chloride channel LDO71_02700 PF04002 RadC-like JAB domain LDO71_02705 PF02441 Flavoprotein LDO71_02705 PF04127 DNA / pantothenate metabolism flavoprotein LDO71_02710 PF07549 SecD/SecF GG Motif LDO71_02710 PF02355 Protein export membrane protein LDO71_02715 PF07549 SecD/SecF GG Motif LDO71_02715 PF13721 SecD export protein N-terminal TM region LDO71_02715 PF02355 Protein export membrane protein LDO71_02720 PF02699 Preprotein translocase subunit LDO71_02725 PF01702 Queuine tRNA-ribosyltransferase LDO71_02740 PF02547 Queuosine biosynthesis protein LDO71_02750 PF00512 His Kinase A (phospho-acceptor) domain LDO71_02750 PF07689 KaiB domain LDO71_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_02755 PF03710 Glutamate-ammonia ligase adenylyltransferase LDO71_02755 PF08335 GlnD PII-uridylyltransferase LDO71_02760 PF01063 Amino-transferase class IV LDO71_02775 PF01522 Polysaccharide deacetylase LDO71_02780 PF00535 Glycosyl transferase family 2 LDO71_02785 PF00534 Glycosyl transferases group 1 LDO71_02785 PF13439 Glycosyltransferase Family 4 LDO71_02800 PF02350 UDP-N-acetylglucosamine 2-epimerase LDO71_02815 PF02938 GAD domain LDO71_02815 PF00152 tRNA synthetases class II (D, K and N) LDO71_02815 PF01336 OB-fold nucleic acid binding domain LDO71_02825 PF07715 TonB-dependent Receptor Plug Domain LDO71_02825 PF00593 TonB dependent receptor LDO71_02845 PF06146 Phosphate-starvation-inducible E LDO71_02850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_02850 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO71_02850 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_02850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_02855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_02855 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_02855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_02855 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO71_02865 PF00672 HAMP domain LDO71_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_02865 PF00512 His Kinase A (phospho-acceptor) domain LDO71_02870 PF00072 Response regulator receiver domain LDO71_02870 PF00486 Transcriptional regulatory protein, C terminal LDO71_02875 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LDO71_02890 PF03009 Glycerophosphoryl diester phosphodiesterase family LDO71_02895 PF01923 Cobalamin adenosyltransferase LDO71_02900 PF07715 TonB-dependent Receptor Plug Domain LDO71_02900 PF00593 TonB dependent receptor LDO71_02905 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LDO71_02910 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_02935 PF00290 Tryptophan synthase alpha chain LDO71_02940 PF01039 Carboxyl transferase domain LDO71_02945 PF02875 Mur ligase family, glutamate ligase domain LDO71_02945 PF08245 Mur ligase middle domain LDO71_02960 PF00753 Metallo-beta-lactamase superfamily LDO71_02965 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDO71_02965 PF00578 AhpC/TSA family LDO71_02970 PF07516 SecA Wing and Scaffold domain LDO71_02970 PF01043 SecA preprotein cross-linking domain LDO71_02970 PF07517 SecA DEAD-like domain LDO71_02970 PF02810 SEC-C motif LDO71_02980 PF07690 Major Facilitator Superfamily LDO71_02980 PF00083 Sugar (and other) transporter LDO71_02985 PF03006 Haemolysin-III related LDO71_02995 PF13673 Acetyltransferase (GNAT) domain LDO71_03010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO71_03010 PF00378 Enoyl-CoA hydratase/isomerase LDO71_03010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO71_03015 PF02803 Thiolase, C-terminal domain LDO71_03015 PF00108 Thiolase, N-terminal domain LDO71_03020 PF02311 AraC-like ligand binding domain LDO71_03020 PF12833 Helix-turn-helix domain LDO71_03025 PF02515 CoA-transferase family III LDO71_03030 PF04966 Carbohydrate-selective porin, OprB family LDO71_03035 PF01011 PQQ enzyme repeat LDO71_03040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDO71_03040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDO71_03050 PF00893 Small Multidrug Resistance protein LDO71_03060 PF02803 Thiolase, C-terminal domain LDO71_03060 PF00108 Thiolase, N-terminal domain LDO71_03070 PF13505 Outer membrane protein beta-barrel domain LDO71_03070 PF00691 OmpA family LDO71_03080 PF01139 tRNA-splicing ligase RtcB LDO71_03085 PF00324 Amino acid permease LDO71_03090 PF05175 Methyltransferase small domain LDO71_03090 PF08468 Methyltransferase small domain N-terminal LDO71_03095 PF00860 Permease family LDO71_03100 PF00679 Elongation factor G C-terminus LDO71_03100 PF00009 Elongation factor Tu GTP binding domain LDO71_03100 PF03144 Elongation factor Tu domain 2 LDO71_03105 PF01741 Large-conductance mechanosensitive channel, MscL LDO71_03120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDO71_03120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDO71_03120 PF06827 Zinc finger found in FPG and IleRS LDO71_03125 PF02245 Methylpurine-DNA glycosylase (MPG) LDO71_03135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO71_03150 PF10411 Disulfide bond isomerase protein N-terminus LDO71_03150 PF13098 Thioredoxin-like domain LDO71_03155 PF01571 Aminomethyltransferase folate-binding domain LDO71_03165 PF04343 Protein of unknown function, DUF488 LDO71_03170 PF03831 PhnA domain LDO71_03170 PF08274 PhnA Zinc-Ribbon LDO71_03175 PF07411 Domain of unknown function (DUF1508) LDO71_03180 PF03129 Anticodon binding domain LDO71_03180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDO71_03180 PF04073 Aminoacyl-tRNA editing domain LDO71_03185 PF00873 AcrB/AcrD/AcrF family LDO71_03200 PF00072 Response regulator receiver domain LDO71_03205 PF00072 Response regulator receiver domain LDO71_03210 PF01584 CheW-like domain LDO71_03215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LDO71_03215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDO71_03220 PF01584 CheW-like domain LDO71_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_03220 PF01627 Hpt domain LDO71_03220 PF00072 Response regulator receiver domain LDO71_03230 PF01546 Peptidase family M20/M25/M40 LDO71_03230 PF07687 Peptidase dimerisation domain LDO71_03235 PF08085 Entericidin EcnA/B family LDO71_03245 PF04304 Protein of unknown function (DUF454) LDO71_03250 PF03734 L,D-transpeptidase catalytic domain LDO71_03250 PF17969 L,D-transpeptidase C-terminal domain LDO71_03290 PF00175 Oxidoreductase NAD-binding domain LDO71_03290 PF00258 Flavodoxin LDO71_03290 PF00667 FAD binding domain LDO71_03300 PF12805 FUSC-like inner membrane protein yccS LDO71_03305 PF07690 Major Facilitator Superfamily LDO71_03310 PF00881 Nitroreductase family LDO71_03325 PF01235 Sodium:alanine symporter family LDO71_03330 PF01734 Patatin-like phospholipase LDO71_03335 PF13291 ACT domain LDO71_03335 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_03340 PF05992 SbmA/BacA-like family LDO71_03345 PF01431 Peptidase family M13 LDO71_03345 PF05649 Peptidase family M13 LDO71_03370 PF02934 GatB/GatE catalytic domain LDO71_03370 PF02637 GatB domain LDO71_03375 PF01425 Amidase LDO71_03380 PF02686 Glu-tRNAGln amidotransferase C subunit LDO71_03390 PF04085 rod shape-determining protein MreC LDO71_03395 PF04093 rod shape-determining protein MreD LDO71_03400 PF02545 Maf-like protein LDO71_03405 PF00575 S1 RNA binding domain LDO71_03405 PF10150 Ribonuclease E/G family LDO71_03415 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LDO71_03415 PF06974 Protein of unknown function (DUF1298) LDO71_03420 PF01507 Phosphoadenosine phosphosulfate reductase family LDO71_03435 PF02525 Flavodoxin-like fold LDO71_03455 PF02673 Bacitracin resistance protein BacA LDO71_03460 PF12833 Helix-turn-helix domain LDO71_03460 PF06719 AraC-type transcriptional regulator N-terminus LDO71_03465 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_03465 PF16197 Ketoacyl-synthetase C-terminal extension LDO71_03465 PF08659 KR domain LDO71_03465 PF00550 Phosphopantetheine attachment site LDO71_03465 PF14765 Polyketide synthase dehydratase LDO71_03465 PF00698 Acyl transferase domain LDO71_03465 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_03465 PF08990 Erythronolide synthase docking LDO71_03465 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_03465 PF09277 Erythronolide synthase, docking LDO71_03470 PF01965 DJ-1/PfpI family LDO71_03480 PF00324 Amino acid permease LDO71_03485 PF04303 PrpF protein LDO71_03490 PF00348 Polyprenyl synthetase LDO71_03495 PF04237 YjbR LDO71_03500 PF01145 SPFH domain / Band 7 family LDO71_03510 PF01734 Patatin-like phospholipase LDO71_03530 PF08019 Phosphoethanolamine transferase EptA/EptB LDO71_03530 PF00884 Sulfatase LDO71_03535 PF00072 Response regulator receiver domain LDO71_03535 PF00486 Transcriptional regulatory protein, C terminal LDO71_03540 PF08521 Two-component sensor kinase N-terminal LDO71_03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_03540 PF00512 His Kinase A (phospho-acceptor) domain LDO71_03550 PF00909 Ammonium Transporter Family LDO71_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_03555 PF03466 LysR substrate binding domain LDO71_03575 PF00133 tRNA synthetases class I (I, L, M and V) LDO71_03575 PF08264 Anticodon-binding domain of tRNA LDO71_03575 PF10458 Valyl tRNA synthetase tRNA binding arm LDO71_03595 PF01906 Putative heavy-metal-binding LDO71_03600 PF01906 Putative heavy-metal-binding LDO71_03605 PF02321 Outer membrane efflux protein LDO71_03610 PF00873 AcrB/AcrD/AcrF family LDO71_03615 PF00529 HlyD membrane-fusion protein of T1SS LDO71_03615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_03620 PF01569 PAP2 superfamily LDO71_03630 PF00348 Polyprenyl synthetase LDO71_03640 PF00829 Ribosomal prokaryotic L21 protein LDO71_03645 PF01016 Ribosomal L27 protein LDO71_03650 PF03548 Outer membrane lipoprotein carrier protein LolA LDO71_03660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDO71_03660 PF02403 Seryl-tRNA synthetase N-terminal domain LDO71_03665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDO71_03665 PF14824 Sirohaem biosynthesis protein central LDO71_03665 PF10414 Sirohaem synthase dimerisation region LDO71_03670 PF00588 SpoU rRNA Methylase family LDO71_03675 PF01638 HxlR-like helix-turn-helix LDO71_03680 PF03358 NADPH-dependent FMN reductase LDO71_03685 PF13520 Amino acid permease LDO71_03690 PF00465 Iron-containing alcohol dehydrogenase LDO71_03700 PF03099 Biotin/lipoate A/B protein ligase family LDO71_03705 PF04359 Protein of unknown function (DUF493) LDO71_03710 PF04545 Sigma-70, region 4 LDO71_03710 PF04539 Sigma-70 region 3 LDO71_03710 PF04542 Sigma-70 region 2 LDO71_03710 PF00140 Sigma-70 factor, region 1.2 LDO71_03710 PF03979 Sigma-70 factor, region 1.1 LDO71_03710 PF04546 Sigma-70, non-essential region LDO71_03730 PF00581 Rhodanese-like domain LDO71_03730 PF17773 UPF0176 acylphosphatase like domain LDO71_03740 PF00285 Citrate synthase, C-terminal domain LDO71_03745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDO71_03750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDO71_03755 PF00890 FAD binding domain LDO71_03755 PF02910 Fumarate reductase flavoprotein C-term LDO71_03760 PF13085 2Fe-2S iron-sulfur cluster binding domain LDO71_03775 PF16870 2-oxoglutarate dehydrogenase C-terminal LDO71_03775 PF02779 Transketolase, pyrimidine binding domain LDO71_03775 PF00676 Dehydrogenase E1 component LDO71_03775 PF16078 2-oxoglutarate dehydrogenase N-terminus LDO71_03780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDO71_03780 PF02817 e3 binding domain LDO71_03780 PF00364 Biotin-requiring enzyme LDO71_03785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_03785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO71_03790 PF08442 ATP-grasp domain LDO71_03790 PF00549 CoA-ligase LDO71_03795 PF02629 CoA binding domain LDO71_03795 PF00549 CoA-ligase LDO71_03800 PF00579 tRNA synthetases class I (W and Y) LDO71_03805 PF05661 Protein of unknown function (DUF808) LDO71_03810 PF04228 Putative neutral zinc metallopeptidase LDO71_03815 PF00999 Sodium/hydrogen exchanger family LDO71_03835 PF09587 Bacterial capsule synthesis protein PGA_cap LDO71_03845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDO71_03850 PF00582 Universal stress protein family LDO71_03855 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_03860 PF01042 Endoribonuclease L-PSP LDO71_03870 PF01272 Transcription elongation factor, GreA/GreB, C-term LDO71_03870 PF03449 Transcription elongation factor, N-terminal LDO71_03875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO71_03875 PF02142 MGS-like domain LDO71_03875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDO71_03880 PF00117 Glutamine amidotransferase class-I LDO71_03880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDO71_03895 PF01985 CRS1 / YhbY (CRM) domain LDO71_03900 PF01728 FtsJ-like methyltransferase LDO71_03905 PF06480 FtsH Extracellular LDO71_03905 PF01434 Peptidase family M41 LDO71_03905 PF17862 AAA+ lid domain LDO71_03905 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_03910 PF00809 Pterin binding enzyme LDO71_03930 PF09423 PhoD-like phosphatase LDO71_03930 PF16655 PhoD-like phosphatase, N-terminal domain LDO71_03945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDO71_03945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDO71_03960 PF00083 Sugar (and other) transporter LDO71_03965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDO71_03965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDO71_03970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LDO71_03970 PF01266 FAD dependent oxidoreductase LDO71_03975 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LDO71_03975 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LDO71_03980 PF00781 Diacylglycerol kinase catalytic domain LDO71_03985 PF00149 Calcineurin-like phosphoesterase LDO71_03990 PF00166 Chaperonin 10 Kd subunit LDO71_03995 PF00118 TCP-1/cpn60 chaperonin family LDO71_04000 PF01219 Prokaryotic diacylglycerol kinase LDO71_04005 PF00753 Metallo-beta-lactamase superfamily LDO71_04010 PF03009 Glycerophosphoryl diester phosphodiesterase family LDO71_04015 PF00873 AcrB/AcrD/AcrF family LDO71_04025 PF01435 Peptidase family M48 LDO71_04030 PF01464 Transglycosylase SLT domain LDO71_04035 PF01171 PP-loop family LDO71_04045 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO71_04045 PF01464 Transglycosylase SLT domain LDO71_04050 PF01272 Transcription elongation factor, GreA/GreB, C-term LDO71_04050 PF03449 Transcription elongation factor, N-terminal LDO71_04065 PF00975 Thioesterase domain LDO71_04065 PF00501 AMP-binding enzyme LDO71_04065 PF00668 Condensation domain LDO71_04065 PF13193 AMP-binding enzyme C-terminal domain LDO71_04065 PF00550 Phosphopantetheine attachment site LDO71_04090 PF00881 Nitroreductase family LDO71_04105 PF02595 Glycerate kinase family LDO71_04110 PF00384 Molybdopterin oxidoreductase LDO71_04115 PF02634 FdhD/NarQ family LDO71_04120 PF06803 Protein of unknown function (DUF1232) LDO71_04125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO71_04125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO71_04125 PF11890 Domain of unknown function (DUF3410) LDO71_04130 PF00152 tRNA synthetases class II (D, K and N) LDO71_04140 PF18073 Rubredoxin metal binding domain LDO71_04145 PF00324 Amino acid permease LDO71_04155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDO71_04155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDO71_04160 PF01678 Diaminopimelate epimerase LDO71_04165 PF00561 alpha/beta hydrolase fold LDO71_04170 PF01810 LysE type translocator LDO71_04175 PF02899 Phage integrase, N-terminal SAM-like domain LDO71_04175 PF00589 Phage integrase family LDO71_04180 PF01012 Electron transfer flavoprotein domain LDO71_04185 PF01012 Electron transfer flavoprotein domain LDO71_04185 PF00766 Electron transfer flavoprotein FAD-binding domain LDO71_04190 PF03989 DNA gyrase C-terminal domain, beta-propeller LDO71_04190 PF00521 DNA gyrase/topoisomerase IV, subunit A LDO71_04205 PF00535 Glycosyl transferase family 2 LDO71_04225 PF13533 Biotin-lipoyl like LDO71_04235 PF00266 Aminotransferase class-V LDO71_04250 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LDO71_04260 PF02687 FtsX-like permease family LDO71_04260 PF12704 MacB-like periplasmic core domain LDO71_04265 PF00005 ABC transporter LDO71_04270 PF13567 Domain of unknown function (DUF4131) LDO71_04270 PF00753 Metallo-beta-lactamase superfamily LDO71_04270 PF03772 Competence protein LDO71_04280 PF06965 Na+/H+ antiporter 1 LDO71_04280 PF01343 Peptidase family S49 LDO71_04285 PF12697 Alpha/beta hydrolase family LDO71_04290 PF00551 Formyl transferase LDO71_04295 PF00586 AIR synthase related protein, N-terminal domain LDO71_04295 PF02769 AIR synthase related protein, C-terminal domain LDO71_04300 PF01594 AI-2E family transporter LDO71_04305 PF00308 Bacterial dnaA protein LDO71_04305 PF08299 Bacterial dnaA protein helix-turn-helix LDO71_04305 PF11638 DnaA N-terminal domain LDO71_04335 PF00588 SpoU rRNA Methylase family LDO71_04335 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDO71_04340 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LDO71_04350 PF00691 OmpA family LDO71_04355 PF07676 WD40-like Beta Propeller Repeat LDO71_04355 PF04052 TolB amino-terminal domain LDO71_04365 PF02472 Biopolymer transport protein ExbD/TolR LDO71_04370 PF01618 MotA/TolQ/ExbB proton channel family LDO71_04375 PF03061 Thioesterase superfamily LDO71_04380 PF07687 Peptidase dimerisation domain LDO71_04380 PF01546 Peptidase family M20/M25/M40 LDO71_04385 PF17864 RuvB AAA lid domain LDO71_04385 PF05491 RuvB C-terminal winged helix domain LDO71_04385 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDO71_04390 PF07499 RuvA, C-terminal domain LDO71_04390 PF01330 RuvA N terminal domain LDO71_04395 PF01966 HD domain LDO71_04400 PF02769 AIR synthase related protein, C-terminal domain LDO71_04400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDO71_04400 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LDO71_04405 PF07690 Major Facilitator Superfamily LDO71_04410 PF01784 NIF3 (NGG1p interacting factor 3) LDO71_04415 PF00378 Enoyl-CoA hydratase/isomerase LDO71_04420 PF00293 NUDIX domain LDO71_04420 PF01467 Cytidylyltransferase-like LDO71_04430 PF00578 AhpC/TSA family LDO71_04445 PF06508 Queuosine biosynthesis protein QueC LDO71_04455 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_04455 PF14602 Hexapeptide repeat of succinyl-transferase LDO71_04455 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LDO71_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_04465 PF03466 LysR substrate binding domain LDO71_04470 PF00005 ABC transporter LDO71_04470 PF12857 TOBE-like domain LDO71_04475 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_04480 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_04495 PF01063 Amino-transferase class IV LDO71_04500 PF02618 YceG-like family LDO71_04505 PF02223 Thymidylate kinase LDO71_04515 PF00890 FAD binding domain LDO71_04515 PF02910 Fumarate reductase flavoprotein C-term LDO71_04520 PF13180 PDZ domain LDO71_04530 PF03144 Elongation factor Tu domain 2 LDO71_04530 PF06421 GTP-binding protein LepA C-terminus LDO71_04530 PF00679 Elongation factor G C-terminus LDO71_04530 PF00009 Elongation factor Tu GTP binding domain LDO71_04535 PF10502 Signal peptidase, peptidase S26 LDO71_04545 PF00035 Double-stranded RNA binding motif LDO71_04545 PF14622 Ribonuclease-III-like LDO71_04550 PF07650 KH domain LDO71_04550 PF01926 50S ribosome-binding GTPase LDO71_04560 PF02565 Recombination protein O C terminal LDO71_04560 PF11967 Recombination protein O N terminal LDO71_04565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LDO71_04570 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LDO71_04575 PF00106 short chain dehydrogenase LDO71_04605 PF00012 Hsp70 protein LDO71_04620 PF00155 Aminotransferase class I and II LDO71_04630 PF00990 Diguanylate cyclase, GGDEF domain LDO71_04630 PF17151 Periplasmic sensor domain LDO71_04640 PF00271 Helicase conserved C-terminal domain LDO71_04640 PF12344 Ultra-violet resistance protein B LDO71_04640 PF17757 UvrB interaction domain LDO71_04640 PF02151 UvrB/uvrC motif LDO71_04640 PF04851 Type III restriction enzyme, res subunit LDO71_04650 PF00892 EamA-like transporter family LDO71_04655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDO71_04655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDO71_04670 PF01018 GTP1/OBG LDO71_04670 PF01926 50S ribosome-binding GTPase LDO71_04675 PF01472 PUA domain LDO71_04675 PF00696 Amino acid kinase family LDO71_04685 PF07759 Protein of unknown function (DUF1615) LDO71_04690 PF01207 Dihydrouridine synthase (Dus) LDO71_04695 PF03060 Nitronate monooxygenase LDO71_04710 PF02350 UDP-N-acetylglucosamine 2-epimerase LDO71_04740 PF00875 DNA photolyase LDO71_04740 PF03441 FAD binding domain of DNA photolyase LDO71_04745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO71_04750 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_04755 PF07943 Penicillin-binding protein 5, C-terminal domain LDO71_04755 PF00768 D-alanyl-D-alanine carboxypeptidase LDO71_04765 PF03971 Monomeric isocitrate dehydrogenase LDO71_04770 PF00849 RNA pseudouridylate synthase LDO71_04795 PF06779 Uncharacterised MFS-type transporter YbfB LDO71_04800 PF03466 LysR substrate binding domain LDO71_04800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_04805 PF00375 Sodium:dicarboxylate symporter family LDO71_04810 PF02567 Phenazine biosynthesis-like protein LDO71_04815 PF05193 Peptidase M16 inactive domain LDO71_04815 PF00675 Insulinase (Peptidase family M16) LDO71_04840 PF02581 Thiamine monophosphate synthase LDO71_04845 PF00202 Aminotransferase class-III LDO71_04855 PF00849 RNA pseudouridylate synthase LDO71_04860 PF00176 SNF2 family N-terminal domain LDO71_04860 PF18337 RapA N-terminal Tudor like domain LDO71_04860 PF18339 RapA N-terminal Tudor like domain 1 LDO71_04860 PF12137 RNA polymerase recycling family C-terminal LDO71_04860 PF00271 Helicase conserved C-terminal domain LDO71_04870 PF00440 Bacterial regulatory proteins, tetR family LDO71_04875 PF00970 Oxidoreductase FAD-binding domain LDO71_04875 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_04875 PF00175 Oxidoreductase NAD-binding domain LDO71_04880 PF00487 Fatty acid desaturase LDO71_04890 PF17754 MftR C-terminal domain LDO71_04890 PF00440 Bacterial regulatory proteins, tetR family LDO71_04900 PF00202 Aminotransferase class-III LDO71_04905 PF00282 Pyridoxal-dependent decarboxylase conserved domain LDO71_04910 PF00171 Aldehyde dehydrogenase family LDO71_04915 PF01037 Lrp/AsnC ligand binding domain LDO71_04920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDO71_04920 PF00205 Thiamine pyrophosphate enzyme, central domain LDO71_04920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDO71_04925 PF00324 Amino acid permease LDO71_04930 PF12849 PBP superfamily domain LDO71_04935 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_04940 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_04945 PF00005 ABC transporter LDO71_04950 PF01343 Peptidase family S49 LDO71_04950 PF08496 Peptidase family S49 N-terminal LDO71_04965 PF08328 Adenylosuccinate lyase C-terminal LDO71_04965 PF00206 Lyase LDO71_04970 PF04356 Protein of unknown function (DUF489) LDO71_04980 PF13344 Haloacid dehalogenase-like hydrolase LDO71_04980 PF00293 NUDIX domain LDO71_04985 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_04990 PF07943 Penicillin-binding protein 5, C-terminal domain LDO71_04990 PF00768 D-alanyl-D-alanine carboxypeptidase LDO71_05005 PF01975 Survival protein SurE LDO71_05010 PF01476 LysM domain LDO71_05010 PF01551 Peptidase family M23 LDO71_05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_05015 PF03466 LysR substrate binding domain LDO71_05020 PF13654 AAA domain LDO71_05020 PF05362 Lon protease (S16) C-terminal proteolytic domain LDO71_05025 PF07690 Major Facilitator Superfamily LDO71_05030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDO71_05035 PF13593 SBF-like CPA transporter family (DUF4137) LDO71_05040 PF01197 Ribosomal protein L31 LDO71_05055 PF04055 Radical SAM superfamily LDO71_05060 PF09285 Elongation factor P, C-terminal LDO71_05060 PF08207 Elongation factor P (EF-P) KOW-like domain LDO71_05060 PF01132 Elongation factor P (EF-P) OB domain LDO71_05065 PF13722 5TM C-terminal transporter carbon starvation CstA LDO71_05065 PF02554 Carbon starvation protein CstA LDO71_05070 PF04328 Selenoprotein, putative LDO71_05080 PF00589 Phage integrase family LDO71_05080 PF13356 Arm DNA-binding domain LDO71_05195 PF02678 Pirin LDO71_05195 PF17954 Quercetinase C-terminal cupin domain LDO71_05200 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_05205 PF08348 YheO-like PAS domain LDO71_05205 PF13309 HTH domain LDO71_05215 PF00550 Phosphopantetheine attachment site LDO71_05215 PF00668 Condensation domain LDO71_05215 PF13193 AMP-binding enzyme C-terminal domain LDO71_05215 PF00501 AMP-binding enzyme LDO71_05220 PF00975 Thioesterase domain LDO71_05220 PF00550 Phosphopantetheine attachment site LDO71_05220 PF00668 Condensation domain LDO71_05220 PF00501 AMP-binding enzyme LDO71_05220 PF13193 AMP-binding enzyme C-terminal domain LDO71_05225 PF01032 FecCD transport family LDO71_05230 PF01032 FecCD transport family LDO71_05235 PF00005 ABC transporter LDO71_05240 PF01497 Periplasmic binding protein LDO71_05245 PF07715 TonB-dependent Receptor Plug Domain LDO71_05245 PF00593 TonB dependent receptor LDO71_05250 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LDO71_05255 PF00668 Condensation domain LDO71_05255 PF13193 AMP-binding enzyme C-terminal domain LDO71_05255 PF00501 AMP-binding enzyme LDO71_05255 PF00550 Phosphopantetheine attachment site LDO71_05255 PF00975 Thioesterase domain LDO71_05260 PF00501 AMP-binding enzyme LDO71_05260 PF13193 AMP-binding enzyme C-terminal domain LDO71_05265 PF00550 Phosphopantetheine attachment site LDO71_05265 PF00857 Isochorismatase family LDO71_05270 PF00282 Pyridoxal-dependent decarboxylase conserved domain LDO71_05275 PF00005 ABC transporter LDO71_05275 PF00664 ABC transporter transmembrane region LDO71_05280 PF00005 ABC transporter LDO71_05285 PF00975 Thioesterase domain LDO71_05295 PF00425 chorismate binding enzyme LDO71_05305 PF01208 Uroporphyrinogen decarboxylase (URO-D) LDO71_05310 PF05675 Protein of unknown function (DUF817) LDO71_05325 PF00144 Beta-lactamase LDO71_05330 PF01227 GTP cyclohydrolase I LDO71_05335 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_05335 PF01799 [2Fe-2S] binding domain LDO71_05340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LDO71_05340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LDO71_05355 PF00218 Indole-3-glycerol phosphate synthase LDO71_05360 PF02885 Glycosyl transferase family, helical bundle domain LDO71_05360 PF00591 Glycosyl transferase family, a/b domain LDO71_05365 PF07715 TonB-dependent Receptor Plug Domain LDO71_05365 PF00593 TonB dependent receptor LDO71_05370 PF11838 ERAP1-like C-terminal domain LDO71_05370 PF01433 Peptidase family M1 domain LDO71_05375 PF00117 Glutamine amidotransferase class-I LDO71_05385 PF00854 POT family LDO71_05390 PF03951 Glutamine synthetase, beta-Grasp domain LDO71_05390 PF00120 Glutamine synthetase, catalytic domain LDO71_05395 PF04345 Chorismate lyase LDO71_05400 PF01040 UbiA prenyltransferase family LDO71_05435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDO71_05435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDO71_05440 PF01784 NIF3 (NGG1p interacting factor 3) LDO71_05445 PF13180 PDZ domain LDO71_05450 PF01743 Poly A polymerase head domain LDO71_05450 PF12627 Probable RNA and SrmB- binding site of polymerase A LDO71_05455 PF01515 Phosphate acetyl/butaryl transferase LDO71_05455 PF03949 Malic enzyme, NAD binding domain LDO71_05455 PF00390 Malic enzyme, N-terminal domain LDO71_05460 PF00990 Diguanylate cyclase, GGDEF domain LDO71_05460 PF00563 EAL domain LDO71_05460 PF03707 Bacterial signalling protein N terminal repeat LDO71_05465 PF04452 RNA methyltransferase LDO71_05470 PF02219 Methylenetetrahydrofolate reductase LDO71_05475 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LDO71_05475 PF05221 S-adenosyl-L-homocysteine hydrolase LDO71_05490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_05490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_05490 PF09317 Domain of unknown function (DUF1974) LDO71_05495 PF04055 Radical SAM superfamily LDO71_05500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_05500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO71_05510 PF07690 Major Facilitator Superfamily LDO71_05520 PF00557 Metallopeptidase family M24 LDO71_05525 PF00318 Ribosomal protein S2 LDO71_05530 PF00889 Elongation factor TS LDO71_05540 PF12833 Helix-turn-helix domain LDO71_05560 PF03330 Lytic transglycolase LDO71_05560 PF05036 Sporulation related domain LDO71_05565 PF13406 Transglycosylase SLT domain LDO71_05570 PF01098 Cell cycle protein LDO71_05580 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LDO71_05580 PF14489 QueF-like protein LDO71_05585 PF01061 ABC-2 type transporter LDO71_05590 PF00005 ABC transporter LDO71_05620 PF00464 Serine hydroxymethyltransferase LDO71_05625 PF02321 Outer membrane efflux protein LDO71_05630 PF00873 AcrB/AcrD/AcrF family LDO71_05635 PF13533 Biotin-lipoyl like LDO71_05640 PF03466 LysR substrate binding domain LDO71_05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_05645 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO71_05650 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_05655 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_05660 PF00005 ABC transporter LDO71_05665 PF00893 Small Multidrug Resistance protein LDO71_05670 PF00037 4Fe-4S binding domain LDO71_05675 PF01136 Peptidase family U32 LDO71_05675 PF16325 Peptidase family U32 C-terminal domain LDO71_05680 PF00155 Aminotransferase class I and II LDO71_05680 PF00392 Bacterial regulatory proteins, gntR family LDO71_05685 PF02567 Phenazine biosynthesis-like protein LDO71_05690 PF00175 Oxidoreductase NAD-binding domain LDO71_05690 PF00970 Oxidoreductase FAD-binding domain LDO71_05695 PF18389 TrmO C-terminal domain LDO71_05695 PF01980 tRNA-methyltransferase O LDO71_05705 PF00437 Type II/IV secretion system protein LDO71_05705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDO71_05715 PF00072 Response regulator receiver domain LDO71_05715 PF00486 Transcriptional regulatory protein, C terminal LDO71_05720 PF08521 Two-component sensor kinase N-terminal LDO71_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_05720 PF00512 His Kinase A (phospho-acceptor) domain LDO71_05730 PF00293 NUDIX domain LDO71_05740 PF14814 Bifunctional transglycosylase second domain LDO71_05740 PF00912 Transglycosylase LDO71_05740 PF00905 Penicillin binding protein transpeptidase domain LDO71_05745 PF01513 ATP-NAD kinase LDO71_05750 PF07023 Protein of unknown function (DUF1315) LDO71_05755 PF02885 Glycosyl transferase family, helical bundle domain LDO71_05755 PF00591 Glycosyl transferase family, a/b domain LDO71_05760 PF00375 Sodium:dicarboxylate symporter family LDO71_05765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_05765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_05765 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_05770 PF00756 Putative esterase LDO71_05775 PF01842 ACT domain LDO71_05775 PF01817 Chorismate mutase type II LDO71_05775 PF00800 Prephenate dehydratase LDO71_05780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDO71_05790 PF01546 Peptidase family M20/M25/M40 LDO71_05790 PF07687 Peptidase dimerisation domain LDO71_05795 PF01137 RNA 3'-terminal phosphate cyclase LDO71_05795 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain LDO71_05810 PF01139 tRNA-splicing ligase RtcB LDO71_05815 PF00753 Metallo-beta-lactamase superfamily LDO71_05820 PF06956 Regulator of RNA terminal phosphate cyclase LDO71_05820 PF00158 Sigma-54 interaction domain LDO71_05830 PF03883 Peroxide stress protein YaaA LDO71_05840 PF05690 Thiazole biosynthesis protein ThiG LDO71_05850 PF04241 Protein of unknown function (DUF423) LDO71_05855 PF00140 Sigma-70 factor, region 1.2 LDO71_05855 PF04542 Sigma-70 region 2 LDO71_05855 PF04545 Sigma-70, region 4 LDO71_05870 PF00313 'Cold-shock' DNA-binding domain LDO71_05875 PF00270 DEAD/DEAH box helicase LDO71_05875 PF00271 Helicase conserved C-terminal domain LDO71_05885 PF00881 Nitroreductase family LDO71_05890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDO71_05890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDO71_05910 PF01180 Dihydroorotate dehydrogenase LDO71_05915 PF02674 Colicin V production protein LDO71_05920 PF00156 Phosphoribosyl transferase domain LDO71_05935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO71_05935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO71_05940 PF01435 Peptidase family M48 LDO71_05945 PF09424 Yqey-like protein LDO71_05950 PF01165 Ribosomal protein S21 LDO71_05955 PF00814 Glycoprotease family LDO71_05975 PF03793 PASTA domain LDO71_05975 PF00069 Protein kinase domain LDO71_06000 PF03466 LysR substrate binding domain LDO71_06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_06005 PF00202 Aminotransferase class-III LDO71_06010 PF00171 Aldehyde dehydrogenase family LDO71_06015 PF00324 Amino acid permease LDO71_06035 PF13649 Methyltransferase domain LDO71_06045 PF04076 Bacterial OB fold (BOF) protein LDO71_06070 PF00561 alpha/beta hydrolase fold LDO71_06075 PF03616 Sodium/glutamate symporter LDO71_06085 PF07729 FCD domain LDO71_06085 PF00392 Bacterial regulatory proteins, gntR family LDO71_06135 PF08946 Osmosensory transporter coiled coil LDO71_06135 PF00083 Sugar (and other) transporter LDO71_06160 PF04403 Paraquat-inducible protein A LDO71_06165 PF02470 MlaD protein LDO71_06175 PF00576 HIUase/Transthyretin family LDO71_06185 PF00072 Response regulator receiver domain LDO71_06185 PF00486 Transcriptional regulatory protein, C terminal LDO71_06190 PF00672 HAMP domain LDO71_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_06190 PF00512 His Kinase A (phospho-acceptor) domain LDO71_06230 PF08521 Two-component sensor kinase N-terminal LDO71_06230 PF00512 His Kinase A (phospho-acceptor) domain LDO71_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_06235 PF00486 Transcriptional regulatory protein, C terminal LDO71_06235 PF00072 Response regulator receiver domain LDO71_06255 PF01177 Asp/Glu/Hydantoin racemase LDO71_06260 PF00892 EamA-like transporter family LDO71_06265 PF07995 Glucose / Sorbosone dehydrogenase LDO71_06285 PF00375 Sodium:dicarboxylate symporter family LDO71_06295 PF00753 Metallo-beta-lactamase superfamily LDO71_06295 PF16123 Hydroxyacylglutathione hydrolase C-terminus LDO71_06300 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_06305 PF00005 ABC transporter LDO71_06305 PF09383 NIL domain LDO71_06310 PF03180 NLPA lipoprotein LDO71_06315 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDO71_06315 PF02843 Phosphoribosylglycinamide synthetase, C domain LDO71_06315 PF02844 Phosphoribosylglycinamide synthetase, N domain LDO71_06320 PF01808 AICARFT/IMPCHase bienzyme LDO71_06320 PF02142 MGS-like domain LDO71_06325 PF02954 Bacterial regulatory protein, Fis family LDO71_06345 PF01134 Glucose inhibited division protein A LDO71_06345 PF13932 GidA associated domain LDO71_06355 PF14403 Circularly permuted ATP-grasp type 2 LDO71_06365 PF08379 Bacterial transglutaminase-like N-terminal region LDO71_06365 PF01841 Transglutaminase-like superfamily LDO71_06375 PF00842 Alanine racemase, C-terminal domain LDO71_06375 PF01168 Alanine racemase, N-terminal domain LDO71_06380 PF00772 DnaB-like helicase N terminal domain LDO71_06380 PF03796 DnaB-like helicase C terminal domain LDO71_06385 PF01281 Ribosomal protein L9, N-terminal domain LDO71_06385 PF03948 Ribosomal protein L9, C-terminal domain LDO71_06390 PF01084 Ribosomal protein S18 LDO71_06395 PF01250 Ribosomal protein S6 LDO71_06400 PF01040 UbiA prenyltransferase family LDO71_06405 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LDO71_06410 PF00510 Cytochrome c oxidase subunit III LDO71_06415 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDO71_06420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDO71_06420 PF06481 COX Aromatic Rich Motif LDO71_06430 PF02896 PEP-utilising enzyme, TIM barrel domain LDO71_06430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDO71_06430 PF00391 PEP-utilising enzyme, mobile domain LDO71_06435 PF03618 Kinase/pyrophosphorylase LDO71_06445 PF14883 Hypothetical glycosyl hydrolase family 13 LDO71_06445 PF01522 Polysaccharide deacetylase LDO71_06450 PF00535 Glycosyl transferase family 2 LDO71_06455 PF13994 PgaD-like protein LDO71_06465 PF00296 Luciferase-like monooxygenase LDO71_06480 PF03466 LysR substrate binding domain LDO71_06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_06490 PF00472 RF-1 domain LDO71_06490 PF03462 PCRF domain LDO71_06495 PF13847 Methyltransferase domain LDO71_06495 PF17827 PrmC N-terminal domain LDO71_06500 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_06505 PF09084 NMT1/THI5 like LDO71_06510 PF12833 Helix-turn-helix domain LDO71_06515 PF00106 short chain dehydrogenase LDO71_06520 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_06520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_06520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_06525 PF00501 AMP-binding enzyme LDO71_06525 PF13193 AMP-binding enzyme C-terminal domain LDO71_06530 PF01613 Flavin reductase like domain LDO71_06535 PF00899 ThiF family LDO71_06540 PF03109 ABC1 family LDO71_06555 PF03814 Potassium-transporting ATPase A subunit LDO71_06565 PF02669 K+-transporting ATPase, c chain LDO71_06570 PF13493 Domain of unknown function (DUF4118) LDO71_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_06570 PF00512 His Kinase A (phospho-acceptor) domain LDO71_06570 PF02702 Osmosensitive K+ channel His kinase sensor domain LDO71_06575 PF00486 Transcriptional regulatory protein, C terminal LDO71_06575 PF00072 Response regulator receiver domain LDO71_06580 PF00120 Glutamine synthetase, catalytic domain LDO71_06590 PF03232 Ubiquinone biosynthesis protein COQ7 LDO71_06595 PF07690 Major Facilitator Superfamily LDO71_06600 PF01103 Surface antigen LDO71_06600 PF07244 Surface antigen variable number repeat LDO71_06600 PF17243 POTRA domain TamA domain 1 LDO71_06615 PF00330 Aconitase family (aconitate hydratase) LDO71_06615 PF06434 Aconitate hydratase 2 N-terminus LDO71_06615 PF11791 Aconitate B N-terminal domain LDO71_06625 PF00027 Cyclic nucleotide-binding domain LDO71_06625 PF00520 Ion transport protein LDO71_06630 PF07690 Major Facilitator Superfamily LDO71_06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_06645 PF03466 LysR substrate binding domain LDO71_06650 PF04284 Protein of unknown function (DUF441) LDO71_06660 PF00849 RNA pseudouridylate synthase LDO71_06660 PF01479 S4 domain LDO71_06675 PF00849 RNA pseudouridylate synthase LDO71_06675 PF01479 S4 domain LDO71_06680 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDO71_06685 PF01119 DNA mismatch repair protein, C-terminal domain LDO71_06685 PF08676 MutL C terminal dimerisation domain LDO71_06695 PF17209 Hfq protein LDO71_06705 PF00881 Nitroreductase family LDO71_06715 PF00149 Calcineurin-like phosphoesterase LDO71_06720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDO71_06725 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDO71_06725 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LDO71_06730 PF00117 Glutamine amidotransferase class-I LDO71_06730 PF00958 GMP synthase C terminal domain LDO71_06730 PF02540 NAD synthase LDO71_06735 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LDO71_06740 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LDO71_06745 PF13520 Amino acid permease LDO71_06750 PF00171 Aldehyde dehydrogenase family LDO71_06765 PF00465 Iron-containing alcohol dehydrogenase LDO71_06770 PF14493 Helix-turn-helix domain LDO71_06770 PF05970 PIF1-like helicase LDO71_06780 PF02110 Hydroxyethylthiazole kinase family LDO71_06795 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LDO71_06795 PF11940 Domain of unknown function (DUF3458) Ig-like fold LDO71_06795 PF01433 Peptidase family M1 domain LDO71_06810 PF13953 PapC C-terminal domain LDO71_06810 PF13954 PapC N-terminal domain LDO71_06810 PF00577 Outer membrane usher protein LDO71_06840 PF01037 Lrp/AsnC ligand binding domain LDO71_06850 PF00440 Bacterial regulatory proteins, tetR family LDO71_06855 PF07715 TonB-dependent Receptor Plug Domain LDO71_06855 PF00593 TonB dependent receptor LDO71_06860 PF00924 Mechanosensitive ion channel LDO71_06890 PF00593 TonB dependent receptor LDO71_06890 PF07715 TonB-dependent Receptor Plug Domain LDO71_06910 PF12848 ABC transporter LDO71_06910 PF00005 ABC transporter LDO71_06915 PF00582 Universal stress protein family LDO71_06945 PF02308 MgtC family LDO71_06950 PF03594 Benzoate membrane transport protein LDO71_06955 PF01037 Lrp/AsnC ligand binding domain LDO71_06960 PF01810 LysE type translocator LDO71_06965 PF00923 Transaldolase/Fructose-6-phosphate aldolase LDO71_06970 PF03466 LysR substrate binding domain LDO71_06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_06980 PF02803 Thiolase, C-terminal domain LDO71_06980 PF00108 Thiolase, N-terminal domain LDO71_06990 PF01575 MaoC like domain LDO71_06995 PF00144 Beta-lactamase LDO71_07005 PF07690 Major Facilitator Superfamily LDO71_07010 PF12170 DNA polymerase III tau subunit V interacting with alpha LDO71_07010 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LDO71_07010 PF12169 DNA polymerase III subunits gamma and tau domain III LDO71_07015 PF04185 Phosphoesterase family LDO71_07015 PF05506 Domain of unknown function (DUF756) LDO71_07020 PF03061 Thioesterase superfamily LDO71_07025 PF00465 Iron-containing alcohol dehydrogenase LDO71_07035 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDO71_07040 PF01565 FAD binding domain LDO71_07040 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDO71_07065 PF01645 Conserved region in glutamate synthase LDO71_07085 PF12832 MFS_1 like family LDO71_07095 PF02785 Biotin carboxylase C-terminal domain LDO71_07095 PF00289 Biotin carboxylase, N-terminal domain LDO71_07095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO71_07100 PF00364 Biotin-requiring enzyme LDO71_07105 PF01220 Dehydroquinase class II LDO71_07110 PF13438 Domain of unknown function (DUF4113) LDO71_07110 PF00817 impB/mucB/samB family LDO71_07110 PF11799 impB/mucB/samB family C-terminal domain LDO71_07115 PF00005 ABC transporter LDO71_07120 PF00072 Response regulator receiver domain LDO71_07120 PF00486 Transcriptional regulatory protein, C terminal LDO71_07130 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDO71_07130 PF13806 Rieske-like [2Fe-2S] domain LDO71_07130 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_07130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDO71_07130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDO71_07130 PF04324 BFD-like [2Fe-2S] binding domain LDO71_07135 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_07135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDO71_07135 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDO71_07135 PF04324 BFD-like [2Fe-2S] binding domain LDO71_07135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDO71_07140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDO71_07140 PF00384 Molybdopterin oxidoreductase LDO71_07140 PF01568 Molydopterin dinucleotide binding domain LDO71_07140 PF04324 BFD-like [2Fe-2S] binding domain LDO71_07145 PF12804 MobA-like NTP transferase domain LDO71_07150 PF01568 Molydopterin dinucleotide binding domain LDO71_07150 PF00384 Molybdopterin oxidoreductase LDO71_07150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDO71_07155 PF06463 Molybdenum Cofactor Synthesis C LDO71_07155 PF04055 Radical SAM superfamily LDO71_07165 PF02391 MoaE protein LDO71_07170 PF00994 Probable molybdopterin binding domain LDO71_07170 PF01967 MoaC family LDO71_07175 PF00994 Probable molybdopterin binding domain LDO71_07175 PF03453 MoeA N-terminal region (domain I and II) LDO71_07175 PF03454 MoeA C-terminal region (domain IV) LDO71_07180 PF01638 HxlR-like helix-turn-helix LDO71_07185 PF00392 Bacterial regulatory proteins, gntR family LDO71_07185 PF00155 Aminotransferase class I and II LDO71_07190 PF00892 EamA-like transporter family LDO71_07210 PF02635 DsrE/DsrF-like family LDO71_07215 PF16363 GDP-mannose 4,6 dehydratase LDO71_07220 PF10415 Fumarase C C-terminus LDO71_07220 PF00206 Lyase LDO71_07240 PF01266 FAD dependent oxidoreductase LDO71_07250 PF02542 YgbB family LDO71_07260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDO71_07260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDO71_07270 PF00158 Sigma-54 interaction domain LDO71_07270 PF00072 Response regulator receiver domain LDO71_07270 PF02954 Bacterial regulatory protein, Fis family LDO71_07275 PF00512 His Kinase A (phospho-acceptor) domain LDO71_07275 PF00989 PAS fold LDO71_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_07285 PF04055 Radical SAM superfamily LDO71_07285 PF18693 TRAM domain LDO71_07285 PF00919 Uncharacterized protein family UPF0004 LDO71_07290 PF00696 Amino acid kinase family LDO71_07295 PF01765 Ribosome recycling factor LDO71_07300 PF01255 Putative undecaprenyl diphosphate synthase LDO71_07310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LDO71_07310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LDO71_07310 PF13288 DXP reductoisomerase C-terminal domain LDO71_07315 PF17820 PDZ domain LDO71_07315 PF13180 PDZ domain LDO71_07315 PF02163 Peptidase family M50 LDO71_07320 PF07244 Surface antigen variable number repeat LDO71_07320 PF01103 Surface antigen LDO71_07330 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_07330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LDO71_07335 PF07977 FabA-like domain LDO71_07340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LDO71_07340 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_07355 PF02631 RecX family LDO71_07360 PF00154 recA bacterial DNA recombination protein LDO71_07365 PF01479 S4 domain LDO71_07370 PF13419 Haloacid dehalogenase-like hydrolase LDO71_07395 PF01037 Lrp/AsnC ligand binding domain LDO71_07400 PF00266 Aminotransferase class-V LDO71_07405 PF00324 Amino acid permease LDO71_07420 PF00082 Subtilase family LDO71_07420 PF05922 Peptidase inhibitor I9 LDO71_07425 PF00916 Sulfate permease family LDO71_07425 PF01740 STAS domain LDO71_07430 PF02586 SOS response associated peptidase (SRAP) LDO71_07445 PF03707 Bacterial signalling protein N terminal repeat LDO71_07445 PF00563 EAL domain LDO71_07445 PF00990 Diguanylate cyclase, GGDEF domain LDO71_07460 PF02378 Phosphotransferase system, EIIC LDO71_07460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDO71_07465 PF00294 pfkB family carbohydrate kinase LDO71_07470 PF05524 PEP-utilising enzyme, N-terminal LDO71_07470 PF00391 PEP-utilising enzyme, mobile domain LDO71_07470 PF02896 PEP-utilising enzyme, TIM barrel domain LDO71_07470 PF00381 PTS HPr component phosphorylation site LDO71_07470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDO71_07495 PF05525 Branched-chain amino acid transport protein LDO71_07500 PF00557 Metallopeptidase family M24 LDO71_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_07505 PF03466 LysR substrate binding domain LDO71_07515 PF00462 Glutaredoxin LDO71_07520 PF00202 Aminotransferase class-III LDO71_07525 PF00478 IMP dehydrogenase / GMP reductase domain LDO71_07525 PF00571 CBS domain LDO71_07550 PF00448 SRP54-type protein, GTPase domain LDO71_07550 PF02881 SRP54-type protein, helical bundle domain LDO71_07560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LDO71_07570 PF08173 Membrane bound YbgT-like protein LDO71_07575 PF02322 Cytochrome bd terminal oxidase subunit II LDO71_07580 PF01654 Cytochrome bd terminal oxidase subunit I LDO71_07590 PF07290 Protein of unknown function (DUF1449) LDO71_07600 PF00294 pfkB family carbohydrate kinase LDO71_07605 PF00593 TonB dependent receptor LDO71_07605 PF07715 TonB-dependent Receptor Plug Domain LDO71_07610 PF05193 Peptidase M16 inactive domain LDO71_07610 PF00675 Insulinase (Peptidase family M16) LDO71_07610 PF08367 Peptidase M16C associated LDO71_07615 PF02253 Phospholipase A1 LDO71_07620 PF02386 Cation transport protein LDO71_07625 PF02080 TrkA-C domain LDO71_07625 PF02254 TrkA-N domain LDO71_07630 PF00585 C-terminal regulatory domain of Threonine dehydratase LDO71_07630 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_07635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDO71_07650 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDO71_07650 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDO71_07660 PF02617 ATP-dependent Clp protease adaptor protein ClpS LDO71_07665 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_07665 PF07724 AAA domain (Cdc48 subfamily) LDO71_07665 PF17871 AAA lid domain LDO71_07665 PF02861 Clp amino terminal domain, pathogenicity island component LDO71_07665 PF10431 C-terminal, D2-small domain, of ClpB protein LDO71_07670 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LDO71_07675 PF00793 DAHP synthetase I family LDO71_07690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO71_07690 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_07720 PF06418 CTP synthase N-terminus LDO71_07720 PF00117 Glutamine amidotransferase class-I LDO71_07725 PF00793 DAHP synthetase I family LDO71_07730 PF03952 Enolase, N-terminal domain LDO71_07730 PF00113 Enolase, C-terminal TIM barrel domain LDO71_07735 PF04239 Protein of unknown function (DUF421) LDO71_07740 PF04977 Septum formation initiator LDO71_07745 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LDO71_07750 PF01144 Coenzyme A transferase LDO71_07755 PF01144 Coenzyme A transferase LDO71_07760 PF02803 Thiolase, C-terminal domain LDO71_07760 PF00108 Thiolase, N-terminal domain LDO71_07765 PF10397 Adenylosuccinate lyase C-terminus LDO71_07765 PF00206 Lyase LDO71_07770 PF00561 alpha/beta hydrolase fold LDO71_07775 PF07690 Major Facilitator Superfamily LDO71_07780 PF02627 Carboxymuconolactone decarboxylase family LDO71_07785 PF00775 Dioxygenase LDO71_07785 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LDO71_07790 PF00775 Dioxygenase LDO71_07795 PF01487 Type I 3-dehydroquinase LDO71_07800 PF05048 Periplasmic copper-binding protein (NosD) LDO71_07805 PF04966 Carbohydrate-selective porin, OprB family LDO71_07810 PF01011 PQQ enzyme repeat LDO71_07810 PF13360 PQQ-like domain LDO71_07820 PF04143 Sulphur transport LDO71_07830 PF00753 Metallo-beta-lactamase superfamily LDO71_07835 PF09339 IclR helix-turn-helix domain LDO71_07835 PF01614 Bacterial transcriptional regulator LDO71_07840 PF03466 LysR substrate binding domain LDO71_07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_07860 PF00106 short chain dehydrogenase LDO71_07870 PF07690 Major Facilitator Superfamily LDO71_07880 PF01425 Amidase LDO71_07885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LDO71_07900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDO71_07900 PF00355 Rieske [2Fe-2S] domain LDO71_07915 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_07915 PF00175 Oxidoreductase NAD-binding domain LDO71_07920 PF01613 Flavin reductase like domain LDO71_07925 PF02311 AraC-like ligand binding domain LDO71_07925 PF12833 Helix-turn-helix domain LDO71_07930 PF02728 Copper amine oxidase, N3 domain LDO71_07930 PF02727 Copper amine oxidase, N2 domain LDO71_07930 PF01179 Copper amine oxidase, enzyme domain LDO71_07930 PF07833 Copper amine oxidase N-terminal domain LDO71_07940 PF00171 Aldehyde dehydrogenase family LDO71_07945 PF12146 Serine aminopeptidase, S33 LDO71_07950 PF00108 Thiolase, N-terminal domain LDO71_07950 PF02803 Thiolase, C-terminal domain LDO71_07955 PF01144 Coenzyme A transferase LDO71_07960 PF01144 Coenzyme A transferase LDO71_07965 PF04444 Catechol dioxygenase N terminus LDO71_07965 PF00775 Dioxygenase LDO71_07970 PF02426 Muconolactone delta-isomerase LDO71_07975 PF13378 Enolase C-terminal domain-like LDO71_07975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LDO71_07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_07980 PF03466 LysR substrate binding domain LDO71_07990 PF00392 Bacterial regulatory proteins, gntR family LDO71_07990 PF07729 FCD domain LDO71_07995 PF00920 Dehydratase family LDO71_08000 PF07690 Major Facilitator Superfamily LDO71_08010 PF00171 Aldehyde dehydrogenase family LDO71_08020 PF00561 alpha/beta hydrolase fold LDO71_08025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_08025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO71_08030 PF00106 short chain dehydrogenase LDO71_08040 PF09278 MerR, DNA binding LDO71_08040 PF00376 MerR family regulatory protein LDO71_08050 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_08060 PF12706 Beta-lactamase superfamily domain LDO71_08065 PF08359 YsiA-like protein, C-terminal region LDO71_08065 PF00440 Bacterial regulatory proteins, tetR family LDO71_08075 PF00857 Isochorismatase family LDO71_08080 PF03466 LysR substrate binding domain LDO71_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08085 PF07995 Glucose / Sorbosone dehydrogenase LDO71_08090 PF02254 TrkA-N domain LDO71_08090 PF00999 Sodium/hydrogen exchanger family LDO71_08100 PF01546 Peptidase family M20/M25/M40 LDO71_08100 PF07687 Peptidase dimerisation domain LDO71_08135 PF07690 Major Facilitator Superfamily LDO71_08140 PF04909 Amidohydrolase LDO71_08160 PF08450 SMP-30/Gluconolactonase/LRE-like region LDO71_08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08170 PF03466 LysR substrate binding domain LDO71_08185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_08185 PF00529 HlyD membrane-fusion protein of T1SS LDO71_08200 PF00171 Aldehyde dehydrogenase family LDO71_08205 PF00920 Dehydratase family LDO71_08215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08215 PF03466 LysR substrate binding domain LDO71_08220 PF01370 NAD dependent epimerase/dehydratase family LDO71_08225 PF07690 Major Facilitator Superfamily LDO71_08230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDO71_08230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDO71_08235 PF12833 Helix-turn-helix domain LDO71_08235 PF06719 AraC-type transcriptional regulator N-terminus LDO71_08250 PF00107 Zinc-binding dehydrogenase LDO71_08250 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_08260 PF01032 FecCD transport family LDO71_08265 PF00005 ABC transporter LDO71_08285 PF14572 Phosphoribosyl synthetase-associated domain LDO71_08285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDO71_08290 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDO71_08305 PF13533 Biotin-lipoyl like LDO71_08310 PF07690 Major Facilitator Superfamily LDO71_08335 PF01975 Survival protein SurE LDO71_08345 PF13291 ACT domain LDO71_08345 PF04607 Region found in RelA / SpoT proteins LDO71_08345 PF02824 TGS domain LDO71_08400 PF12146 Serine aminopeptidase, S33 LDO71_08405 PF03466 LysR substrate binding domain LDO71_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08415 PF12146 Serine aminopeptidase, S33 LDO71_08420 PF02311 AraC-like ligand binding domain LDO71_08420 PF12833 Helix-turn-helix domain LDO71_08435 PF00672 HAMP domain LDO71_08435 PF18698 Histidine kinase sensor domain LDO71_08435 PF00512 His Kinase A (phospho-acceptor) domain LDO71_08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_08440 PF00072 Response regulator receiver domain LDO71_08440 PF00486 Transcriptional regulatory protein, C terminal LDO71_08445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_08445 PF00529 HlyD membrane-fusion protein of T1SS LDO71_08450 PF00873 AcrB/AcrD/AcrF family LDO71_08455 PF02321 Outer membrane efflux protein LDO71_08460 PF12146 Serine aminopeptidase, S33 LDO71_08465 PF00743 Flavin-binding monooxygenase-like LDO71_08470 PF01593 Flavin containing amine oxidoreductase LDO71_08485 PF01266 FAD dependent oxidoreductase LDO71_08505 PF16970 Type-1 fimbrial protein, A LDO71_08510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDO71_08510 PF02753 Pili assembly chaperone PapD, C-terminal domain LDO71_08515 PF13953 PapC C-terminal domain LDO71_08515 PF13954 PapC N-terminal domain LDO71_08515 PF00577 Outer membrane usher protein LDO71_08530 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_08530 PF00107 Zinc-binding dehydrogenase LDO71_08540 PF00199 Catalase LDO71_08555 PF13091 PLD-like domain LDO71_08570 PF01244 Membrane dipeptidase (Peptidase family M19) LDO71_08575 PF04055 Radical SAM superfamily LDO71_08575 PF13186 Iron-sulfur cluster-binding domain LDO71_08580 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LDO71_08585 PF03070 TENA/THI-4/PQQC family LDO71_08590 PF12706 Beta-lactamase superfamily domain LDO71_08595 PF08042 PqqA family LDO71_08600 PF13089 Polyphosphate kinase N-terminal domain LDO71_08600 PF02503 Polyphosphate kinase middle domain LDO71_08600 PF13090 Polyphosphate kinase C-terminal domain 2 LDO71_08600 PF17941 Polyphosphate kinase C-terminal domain 1 LDO71_08605 PF00149 Calcineurin-like phosphoesterase LDO71_08615 PF00550 Phosphopantetheine attachment site LDO71_08615 PF00857 Isochorismatase family LDO71_08620 PF00106 short chain dehydrogenase LDO71_08625 PF00005 ABC transporter LDO71_08625 PF03459 TOBE domain LDO71_08630 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08640 PF03459 TOBE domain LDO71_08645 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDO71_08645 PF00355 Rieske [2Fe-2S] domain LDO71_08650 PF00866 Ring hydroxylating beta subunit LDO71_08655 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_08655 PF00970 Oxidoreductase FAD-binding domain LDO71_08655 PF00175 Oxidoreductase NAD-binding domain LDO71_08660 PF12833 Helix-turn-helix domain LDO71_08660 PF14525 AraC-binding-like domain LDO71_08670 PF01613 Flavin reductase like domain LDO71_08685 PF01738 Dienelactone hydrolase family LDO71_08690 PF07690 Major Facilitator Superfamily LDO71_08695 PF06719 AraC-type transcriptional regulator N-terminus LDO71_08695 PF12833 Helix-turn-helix domain LDO71_08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08730 PF03466 LysR substrate binding domain LDO71_08735 PF01144 Coenzyme A transferase LDO71_08740 PF01144 Coenzyme A transferase LDO71_08745 PF02667 Short chain fatty acid transporter LDO71_08750 PF00108 Thiolase, N-terminal domain LDO71_08750 PF02803 Thiolase, C-terminal domain LDO71_08755 PF03466 LysR substrate binding domain LDO71_08755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08760 PF03466 LysR substrate binding domain LDO71_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_08775 PF00206 Lyase LDO71_08775 PF10415 Fumarase C C-terminus LDO71_08780 PF07715 TonB-dependent Receptor Plug Domain LDO71_08780 PF00593 TonB dependent receptor LDO71_08785 PF00083 Sugar (and other) transporter LDO71_08800 PF00005 ABC transporter LDO71_08805 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_08810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDO71_08825 PF00392 Bacterial regulatory proteins, gntR family LDO71_08825 PF07702 UTRA domain LDO71_08835 PF02525 Flavodoxin-like fold LDO71_08840 PF01638 HxlR-like helix-turn-helix LDO71_08845 PF12833 Helix-turn-helix domain LDO71_08860 PF01925 Sulfite exporter TauE/SafE LDO71_08875 PF00753 Metallo-beta-lactamase superfamily LDO71_08875 PF04273 Putative phosphatase (DUF442) LDO71_08880 PF02954 Bacterial regulatory protein, Fis family LDO71_08880 PF00072 Response regulator receiver domain LDO71_08880 PF00158 Sigma-54 interaction domain LDO71_08885 PF01062 Bestrophin, RFP-TM, chloride channel LDO71_08890 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_08890 PF00107 Zinc-binding dehydrogenase LDO71_08895 PF00106 short chain dehydrogenase LDO71_08900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO71_08900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_08905 PF00364 Biotin-requiring enzyme LDO71_08905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDO71_08905 PF02817 e3 binding domain LDO71_08910 PF02780 Transketolase, C-terminal domain LDO71_08910 PF02779 Transketolase, pyrimidine binding domain LDO71_08915 PF00676 Dehydrogenase E1 component LDO71_08920 PF04055 Radical SAM superfamily LDO71_08935 PF00990 Diguanylate cyclase, GGDEF domain LDO71_08935 PF08448 PAS fold LDO71_08940 PF01264 Chorismate synthase LDO71_08945 PF05175 Methyltransferase small domain LDO71_08950 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_08960 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_08960 PF01434 Peptidase family M41 LDO71_08960 PF17862 AAA+ lid domain LDO71_08970 PF05166 YcgL domain LDO71_08990 PF01612 3'-5' exonuclease LDO71_08990 PF00570 HRDC domain LDO71_08995 PF02132 RecR protein LDO71_08995 PF13662 Toprim domain LDO71_09000 PF02575 YbaB/EbfC DNA-binding family LDO71_09010 PF01053 Cys/Met metabolism PLP-dependent enzyme LDO71_09015 PF00561 alpha/beta hydrolase fold LDO71_09020 PF08241 Methyltransferase domain LDO71_09050 PF01230 HIT domain LDO71_09090 PF00005 ABC transporter LDO71_09095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_09105 PF02684 Lipid-A-disaccharide synthetase LDO71_09110 PF07715 TonB-dependent Receptor Plug Domain LDO71_09110 PF00593 TonB dependent receptor LDO71_09130 PF01925 Sulfite exporter TauE/SafE LDO71_09135 PF00793 DAHP synthetase I family LDO71_09140 PF02654 Cobalamin-5-phosphate synthase LDO71_09155 PF02277 Phosphoribosyltransferase LDO71_09160 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LDO71_09170 PF13419 Haloacid dehalogenase-like hydrolase LDO71_09195 PF07715 TonB-dependent Receptor Plug Domain LDO71_09195 PF00593 TonB dependent receptor LDO71_09200 PF03737 Aldolase/RraA LDO71_09210 PF06276 Ferric iron reductase FhuF-like transporter LDO71_09210 PF04183 IucA / IucC family LDO71_09215 PF06276 Ferric iron reductase FhuF-like transporter LDO71_09215 PF04183 IucA / IucC family LDO71_09220 PF07690 Major Facilitator Superfamily LDO71_09225 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LDO71_09230 PF06276 Ferric iron reductase FhuF-like transporter LDO71_09230 PF04183 IucA / IucC family LDO71_09235 PF04073 Aminoacyl-tRNA editing domain LDO71_09245 PF03109 ABC1 family LDO71_09250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_09250 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_09250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_09255 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_09255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_09255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_09260 PF00487 Fatty acid desaturase LDO71_09265 PF12833 Helix-turn-helix domain LDO71_09265 PF12852 Cupin LDO71_09270 PF09312 SurA N-terminal domain LDO71_09270 PF00639 PPIC-type PPIASE domain LDO71_09275 PF00216 Bacterial DNA-binding protein LDO71_09290 PF02082 Transcriptional regulator LDO71_09295 PF00266 Aminotransferase class-V LDO71_09300 PF01592 NifU-like N terminal domain LDO71_09305 PF01521 Iron-sulphur cluster biosynthesis LDO71_09310 PF00226 DnaJ domain LDO71_09310 PF07743 HSCB C-terminal oligomerisation domain LDO71_09315 PF00012 Hsp70 protein LDO71_09320 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_09325 PF00211 Adenylate and Guanylate cyclase catalytic domain LDO71_09335 PF02559 CarD-like/TRCF domain LDO71_09335 PF00270 DEAD/DEAH box helicase LDO71_09335 PF00271 Helicase conserved C-terminal domain LDO71_09335 PF03461 TRCF domain LDO71_09335 PF17757 UvrB interaction domain LDO71_09355 PF03737 Aldolase/RraA LDO71_09360 PF13460 NAD(P)H-binding LDO71_09365 PF01649 Ribosomal protein S20 LDO71_09375 PF00459 Inositol monophosphatase family LDO71_09390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDO71_09390 PF00005 ABC transporter LDO71_09395 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_09400 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_09405 PF01432 Peptidase family M3 LDO71_09425 PF00593 TonB dependent receptor LDO71_09425 PF07715 TonB-dependent Receptor Plug Domain LDO71_09435 PF01618 MotA/TolQ/ExbB proton channel family LDO71_09440 PF02472 Biopolymer transport protein ExbD/TolR LDO71_09445 PF02472 Biopolymer transport protein ExbD/TolR LDO71_09455 PF01274 Malate synthase LDO71_09460 PF03969 AFG1-like ATPase LDO71_09470 PF00743 Flavin-binding monooxygenase-like LDO71_09480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDO71_09490 PF00216 Bacterial DNA-binding protein LDO71_09495 PF00575 S1 RNA binding domain LDO71_09500 PF02224 Cytidylate kinase LDO71_09510 PF14437 MafB19-like deaminase LDO71_09520 PF03167 Uracil DNA glycosylase superfamily LDO71_09530 PF03934 Type II secretion system (T2SS), protein K LDO71_09535 PF11612 Type II secretion system (T2SS), protein J LDO71_09535 PF07963 Prokaryotic N-terminal methylation motif LDO71_09540 PF07963 Prokaryotic N-terminal methylation motif LDO71_09540 PF02501 Type II secretion system (T2SS), protein I LDO71_09555 PF01026 TatD related DNase LDO71_09565 PF09115 DNA polymerase III, delta subunit, C terminal LDO71_09570 PF02348 Cytidylyltransferase LDO71_09575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LDO71_09580 PF00664 ABC transporter transmembrane region LDO71_09580 PF00005 ABC transporter LDO71_09590 PF01618 MotA/TolQ/ExbB proton channel family LDO71_09595 PF17762 HTH domain found in ParB protein LDO71_09595 PF02195 ParB-like nuclease domain LDO71_09600 PF13614 AAA domain LDO71_09605 PF02527 rRNA small subunit methyltransferase G LDO71_09610 PF00483 Nucleotidyl transferase LDO71_09615 PF01636 Phosphotransferase enzyme family LDO71_09620 PF04453 LPS transport system D LDO71_09620 PF03968 OstA-like protein LDO71_09625 PF00639 PPIC-type PPIASE domain LDO71_09625 PF09312 SurA N-terminal domain LDO71_09630 PF01116 Fructose-bisphosphate aldolase class-II LDO71_09640 PF00162 Phosphoglycerate kinase LDO71_09650 PF02545 Maf-like protein LDO71_09655 PF08007 Cupin superfamily protein LDO71_09670 PF00375 Sodium:dicarboxylate symporter family LDO71_09675 PF06912 Protein of unknown function (DUF1275) LDO71_09680 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LDO71_09685 PF00664 ABC transporter transmembrane region LDO71_09685 PF00005 ABC transporter LDO71_09695 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LDO71_09695 PF12833 Helix-turn-helix domain LDO71_09700 PF01597 Glycine cleavage H-protein LDO71_09705 PF02146 Sir2 family LDO71_09710 PF00474 Sodium:solute symporter family LDO71_09715 PF01037 Lrp/AsnC ligand binding domain LDO71_09720 PF00171 Aldehyde dehydrogenase family LDO71_09720 PF01619 Proline dehydrogenase LDO71_09720 PF14850 DNA-binding domain of Proline dehydrogenase LDO71_09720 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LDO71_09725 PF04229 GrpB protein LDO71_09730 PF05958 tRNA (Uracil-5-)-methyltransferase LDO71_09740 PF09992 Phosphodiester glycosidase LDO71_09750 PF04264 YceI-like domain LDO71_09760 PF02779 Transketolase, pyrimidine binding domain LDO71_09760 PF02780 Transketolase, C-terminal domain LDO71_09760 PF00456 Transketolase, thiamine diphosphate binding domain LDO71_09765 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDO71_09765 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDO71_09765 PF02772 S-adenosylmethionine synthetase, central domain LDO71_09785 PF00905 Penicillin binding protein transpeptidase domain LDO71_09800 PF02075 Crossover junction endodeoxyribonuclease RuvC LDO71_09805 PF01256 Carbohydrate kinase LDO71_09805 PF03853 YjeF-related protein N-terminus LDO71_09810 PF08331 Domain of unknown function (DUF1730) LDO71_09815 PF06968 Biotin and Thiamin Synthesis associated domain LDO71_09815 PF04055 Radical SAM superfamily LDO71_09830 PF16970 Type-1 fimbrial protein, A LDO71_09835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDO71_09835 PF02753 Pili assembly chaperone PapD, C-terminal domain LDO71_09840 PF00577 Outer membrane usher protein LDO71_09840 PF13953 PapC C-terminal domain LDO71_09840 PF13954 PapC N-terminal domain LDO71_09860 PF00892 EamA-like transporter family LDO71_09870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LDO71_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_09880 PF03466 LysR substrate binding domain LDO71_09900 PF00440 Bacterial regulatory proteins, tetR family LDO71_09910 PF01709 Transcriptional regulator LDO71_09915 PF01037 Lrp/AsnC ligand binding domain LDO71_09925 PF00005 ABC transporter LDO71_09930 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_09935 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_09950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LDO71_09950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_09960 PF00296 Luciferase-like monooxygenase LDO71_09965 PF03180 NLPA lipoprotein LDO71_09970 PF03180 NLPA lipoprotein LDO71_09975 PF00005 ABC transporter LDO71_09975 PF09383 NIL domain LDO71_09980 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_09985 PF01926 50S ribosome-binding GTPase LDO71_09985 PF06071 Protein of unknown function (DUF933) LDO71_10010 PF03591 AzlC protein LDO71_10015 PF05437 Branched-chain amino acid transport protein (AzlD) LDO71_10025 PF02222 ATP-grasp domain LDO71_10030 PF08335 GlnD PII-uridylyltransferase LDO71_10030 PF01966 HD domain LDO71_10030 PF01909 Nucleotidyltransferase domain LDO71_10035 PF00155 Aminotransferase class I and II LDO71_10045 PF12852 Cupin LDO71_10045 PF12833 Helix-turn-helix domain LDO71_10050 PF00255 Glutathione peroxidase LDO71_10055 PF01641 SelR domain LDO71_10060 PF00155 Aminotransferase class I and II LDO71_10065 PF00375 Sodium:dicarboxylate symporter family LDO71_10070 PF00710 Asparaginase, N-terminal LDO71_10070 PF17763 Glutaminase/Asparaginase C-terminal domain LDO71_10075 PF01336 OB-fold nucleic acid binding domain LDO71_10075 PF14579 Helix-hairpin-helix motif LDO71_10075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDO71_10075 PF02811 PHP domain LDO71_10075 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDO71_10080 PF00588 SpoU rRNA Methylase family LDO71_10085 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_10100 PF13192 Thioredoxin domain LDO71_10100 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_10115 PF03466 LysR substrate binding domain LDO71_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10120 PF01758 Sodium Bile acid symporter family LDO71_10125 PF01022 Bacterial regulatory protein, arsR family LDO71_10130 PF03960 ArsC family LDO71_10140 PF13382 Adenine deaminase C-terminal domain LDO71_10140 PF01979 Amidohydrolase family LDO71_10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10150 PF03466 LysR substrate binding domain LDO71_10160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LDO71_10165 PF01177 Asp/Glu/Hydantoin racemase LDO71_10170 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LDO71_10175 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_10180 PF00005 ABC transporter LDO71_10185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDO71_10195 PF00083 Sugar (and other) transporter LDO71_10200 PF00296 Luciferase-like monooxygenase LDO71_10215 PF01654 Cytochrome bd terminal oxidase subunit I LDO71_10220 PF02322 Cytochrome bd terminal oxidase subunit II LDO71_10230 PF00155 Aminotransferase class I and II LDO71_10230 PF00392 Bacterial regulatory proteins, gntR family LDO71_10235 PF03466 LysR substrate binding domain LDO71_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10250 PF00698 Acyl transferase domain LDO71_10255 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LDO71_10265 PF01039 Carboxyl transferase domain LDO71_10270 PF06857 Malonate decarboxylase delta subunit (MdcD) LDO71_10275 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LDO71_10280 PF16957 Malonate decarboxylase, alpha subunit, transporter LDO71_10285 PF07690 Major Facilitator Superfamily LDO71_10300 PF00155 Aminotransferase class I and II LDO71_10300 PF00392 Bacterial regulatory proteins, gntR family LDO71_10305 PF04172 LrgB-like family LDO71_10310 PF03788 LrgA family LDO71_10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10315 PF03466 LysR substrate binding domain LDO71_10320 PF14834 Glutathione S-transferase, C-terminal domain LDO71_10320 PF02798 Glutathione S-transferase, N-terminal domain LDO71_10325 PF02798 Glutathione S-transferase, N-terminal domain LDO71_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10345 PF03466 LysR substrate binding domain LDO71_10355 PF00581 Rhodanese-like domain LDO71_10360 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_10370 PF00266 Aminotransferase class-V LDO71_10380 PF01810 LysE type translocator LDO71_10385 PF03466 LysR substrate binding domain LDO71_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10390 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO71_10395 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO71_10400 PF00005 ABC transporter LDO71_10405 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_10410 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_10425 PF00072 Response regulator receiver domain LDO71_10430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_10430 PF00512 His Kinase A (phospho-acceptor) domain LDO71_10430 PF00072 Response regulator receiver domain LDO71_10430 PF09308 LuxQ, periplasmic LDO71_10440 PF01037 Lrp/AsnC ligand binding domain LDO71_10440 PF13404 AsnC-type helix-turn-helix domain LDO71_10450 PF00717 Peptidase S24-like LDO71_10480 PF00199 Catalase LDO71_10480 PF18011 C-terminal domain found in long catalases LDO71_10480 PF06628 Catalase-related immune-responsive LDO71_10490 PF00994 Probable molybdopterin binding domain LDO71_10490 PF02464 Competence-damaged protein LDO71_10490 PF18146 Damage-inducible protein CinA KH domain LDO71_10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10525 PF03466 LysR substrate binding domain LDO71_10545 PF00501 AMP-binding enzyme LDO71_10545 PF13193 AMP-binding enzyme C-terminal domain LDO71_10550 PF00440 Bacterial regulatory proteins, tetR family LDO71_10555 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_10555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_10555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_10560 PF01039 Carboxyl transferase domain LDO71_10565 PF00378 Enoyl-CoA hydratase/isomerase LDO71_10570 PF02785 Biotin carboxylase C-terminal domain LDO71_10570 PF00289 Biotin carboxylase, N-terminal domain LDO71_10570 PF00364 Biotin-requiring enzyme LDO71_10570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO71_10570 PF18140 Propionyl-coenzyme A carboxylase BT domain LDO71_10575 PF00682 HMGL-like LDO71_10580 PF03466 LysR substrate binding domain LDO71_10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_10595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_10595 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_10595 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO71_10605 PF07690 Major Facilitator Superfamily LDO71_10615 PF01144 Coenzyme A transferase LDO71_10620 PF01144 Coenzyme A transferase LDO71_10625 PF07690 Major Facilitator Superfamily LDO71_10630 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_10630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_10630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_10635 PF00378 Enoyl-CoA hydratase/isomerase LDO71_10645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO71_10645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO71_10645 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LDO71_10650 PF02803 Thiolase, C-terminal domain LDO71_10650 PF00108 Thiolase, N-terminal domain LDO71_10655 PF09339 IclR helix-turn-helix domain LDO71_10660 PF07690 Major Facilitator Superfamily LDO71_10670 PF03060 Nitronate monooxygenase LDO71_10675 PF00378 Enoyl-CoA hydratase/isomerase LDO71_10680 PF09339 IclR helix-turn-helix domain LDO71_10685 PF02515 CoA-transferase family III LDO71_10690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_10690 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_10690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_10695 PF07690 Major Facilitator Superfamily LDO71_10700 PF13419 Haloacid dehalogenase-like hydrolase LDO71_10705 PF00266 Aminotransferase class-V LDO71_10710 PF01266 FAD dependent oxidoreductase LDO71_10715 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_10720 PF00005 ABC transporter LDO71_10720 PF08402 TOBE domain LDO71_10730 PF00392 Bacterial regulatory proteins, gntR family LDO71_10730 PF07702 UTRA domain LDO71_10735 PF01494 FAD binding domain LDO71_10740 PF01614 Bacterial transcriptional regulator LDO71_10740 PF09339 IclR helix-turn-helix domain LDO71_10745 PF02525 Flavodoxin-like fold LDO71_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_10750 PF03466 LysR substrate binding domain LDO71_10755 PF02627 Carboxymuconolactone decarboxylase family LDO71_10760 PF00171 Aldehyde dehydrogenase family LDO71_10770 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LDO71_10780 PF00171 Aldehyde dehydrogenase family LDO71_10785 PF00296 Luciferase-like monooxygenase LDO71_10790 PF01613 Flavin reductase like domain LDO71_10795 PF12697 Alpha/beta hydrolase family LDO71_10815 PF01292 Prokaryotic cytochrome b561 LDO71_10820 PF00199 Catalase LDO71_10825 PF07690 Major Facilitator Superfamily LDO71_10830 PF00682 HMGL-like LDO71_10835 PF02515 CoA-transferase family III LDO71_10850 PF12833 Helix-turn-helix domain LDO71_10850 PF06719 AraC-type transcriptional regulator N-terminus LDO71_10860 PF00313 'Cold-shock' DNA-binding domain LDO71_10930 PF03061 Thioesterase superfamily LDO71_10935 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_10940 PF07848 PaaX-like protein LDO71_10940 PF08223 PaaX-like protein C-terminal domain LDO71_10945 PF14535 AMP-binding enzyme C-terminal domain LDO71_10945 PF00501 AMP-binding enzyme LDO71_10950 PF00108 Thiolase, N-terminal domain LDO71_10950 PF02803 Thiolase, C-terminal domain LDO71_10955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO71_10955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO71_10955 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LDO71_10960 PF00378 Enoyl-CoA hydratase/isomerase LDO71_10965 PF00378 Enoyl-CoA hydratase/isomerase LDO71_10970 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_10970 PF00970 Oxidoreductase FAD-binding domain LDO71_10970 PF00175 Oxidoreductase NAD-binding domain LDO71_10975 PF01883 Iron-sulfur cluster assembly protein LDO71_10980 PF05138 Phenylacetic acid catabolic protein LDO71_10985 PF06243 Phenylacetic acid degradation B LDO71_10990 PF05138 Phenylacetic acid catabolic protein LDO71_10995 PF00171 Aldehyde dehydrogenase family LDO71_10995 PF01575 MaoC like domain LDO71_11000 PF03313 Serine dehydratase alpha chain LDO71_11000 PF03315 Serine dehydratase beta chain LDO71_11005 PF13520 Amino acid permease LDO71_11010 PF00171 Aldehyde dehydrogenase family LDO71_11015 PF00083 Sugar (and other) transporter LDO71_11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_11025 PF04324 BFD-like [2Fe-2S] binding domain LDO71_11035 PF01266 FAD dependent oxidoreductase LDO71_11040 PF05544 Proline racemase LDO71_11045 PF00392 Bacterial regulatory proteins, gntR family LDO71_11055 PF00701 Dihydrodipicolinate synthetase family LDO71_11065 PF00376 MerR family regulatory protein LDO71_11065 PF09278 MerR, DNA binding LDO71_11075 PF02677 Epoxyqueuosine reductase QueH LDO71_11090 PF07690 Major Facilitator Superfamily LDO71_11095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDO71_11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_11105 PF03466 LysR substrate binding domain LDO71_11125 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LDO71_11130 PF06812 ImpA, N-terminal, type VI secretion system LDO71_11135 PF10431 C-terminal, D2-small domain, of ClpB protein LDO71_11135 PF17871 AAA lid domain LDO71_11135 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_11135 PF07724 AAA domain (Cdc48 subfamily) LDO71_11150 PF00691 OmpA family LDO71_11160 PF14331 ImcF-related N-terminal domain LDO71_11160 PF06761 Intracellular multiplication and human macrophage-killing LDO71_11160 PF06744 Type VI secretion protein IcmF C-terminal LDO71_11175 PF05947 Type VI secretion system, TssF LDO71_11190 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LDO71_11215 PF00005 ABC transporter LDO71_11220 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO71_11225 PF01425 Amidase LDO71_11230 PF01402 Ribbon-helix-helix protein, copG family LDO71_11230 PF08753 NikR C terminal nickel binding domain LDO71_11240 PF01638 HxlR-like helix-turn-helix LDO71_11245 PF02525 Flavodoxin-like fold LDO71_11250 PF00289 Biotin carboxylase, N-terminal domain LDO71_11250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO71_11250 PF02785 Biotin carboxylase C-terminal domain LDO71_11265 PF13823 Alcohol dehydrogenase GroES-associated LDO71_11265 PF00107 Zinc-binding dehydrogenase LDO71_11265 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_11275 PF00440 Bacterial regulatory proteins, tetR family LDO71_11285 PF01741 Large-conductance mechanosensitive channel, MscL LDO71_11290 PF00654 Voltage gated chloride channel LDO71_11295 PF02785 Biotin carboxylase C-terminal domain LDO71_11295 PF00364 Biotin-requiring enzyme LDO71_11295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO71_11295 PF00289 Biotin carboxylase, N-terminal domain LDO71_11305 PF07286 Protein of unknown function (DUF1445) LDO71_11310 PF03746 LamB/YcsF family LDO71_11315 PF01566 Natural resistance-associated macrophage protein LDO71_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_11320 PF03466 LysR substrate binding domain LDO71_11350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO71_11350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO71_11370 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDO71_11375 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_11380 PF00005 ABC transporter LDO71_11385 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_11390 PF01177 Asp/Glu/Hydantoin racemase LDO71_11395 PF07690 Major Facilitator Superfamily LDO71_11415 PF01544 CorA-like Mg2+ transporter protein LDO71_11420 PF03279 Bacterial lipid A biosynthesis acyltransferase LDO71_11425 PF00563 EAL domain LDO71_11425 PF00990 Diguanylate cyclase, GGDEF domain LDO71_11425 PF03707 Bacterial signalling protein N terminal repeat LDO71_11430 PF00892 EamA-like transporter family LDO71_11435 PF01037 Lrp/AsnC ligand binding domain LDO71_11440 PF05190 MutS family domain IV LDO71_11440 PF05192 MutS domain III LDO71_11440 PF05188 MutS domain II LDO71_11440 PF01624 MutS domain I LDO71_11440 PF00488 MutS domain V LDO71_11450 PF11953 Domain of unknown function (DUF3470) LDO71_11450 PF00037 4Fe-4S binding domain LDO71_11460 PF01596 O-methyltransferase LDO71_11470 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_11475 PF01205 Uncharacterized protein family UPF0029 LDO71_11485 PF00005 ABC transporter LDO71_11485 PF00664 ABC transporter transmembrane region LDO71_11485 PF03412 Peptidase C39 family LDO71_11490 PF02321 Outer membrane efflux protein LDO71_11495 PF00005 ABC transporter LDO71_11495 PF12399 Branched-chain amino acid ATP-binding cassette transporter LDO71_11500 PF03968 OstA-like protein LDO71_11515 PF00571 CBS domain LDO71_11515 PF01380 SIS domain LDO71_11520 PF09190 DALR domain LDO71_11520 PF01406 tRNA synthetases class I (C) catalytic domain LDO71_11560 PF01638 HxlR-like helix-turn-helix LDO71_11565 PF07690 Major Facilitator Superfamily LDO71_11590 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDO71_11590 PF03807 NADP oxidoreductase coenzyme F420-dependent LDO71_11600 PF00313 'Cold-shock' DNA-binding domain LDO71_11605 PF01810 LysE type translocator LDO71_11635 PF02601 Exonuclease VII, large subunit LDO71_11635 PF13742 OB-fold nucleic acid binding domain LDO71_11670 PF00376 MerR family regulatory protein LDO71_11670 PF09278 MerR, DNA binding LDO71_11675 PF00403 Heavy-metal-associated domain LDO71_11680 PF00403 Heavy-metal-associated domain LDO71_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_11685 PF03466 LysR substrate binding domain LDO71_11695 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDO71_11695 PF00355 Rieske [2Fe-2S] domain LDO71_11705 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_11705 PF00970 Oxidoreductase FAD-binding domain LDO71_11705 PF00175 Oxidoreductase NAD-binding domain LDO71_11710 PF00106 short chain dehydrogenase LDO71_11715 PF03594 Benzoate membrane transport protein LDO71_11720 PF07690 Major Facilitator Superfamily LDO71_11730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDO71_11730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDO71_11735 PF04408 Helicase associated domain (HA2) LDO71_11735 PF00271 Helicase conserved C-terminal domain LDO71_11735 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LDO71_11735 PF00270 DEAD/DEAH box helicase LDO71_11735 PF11898 Domain of unknown function (DUF3418) LDO71_11740 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDO71_11740 PF00578 AhpC/TSA family LDO71_11760 PF13192 Thioredoxin domain LDO71_11760 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_11770 PF00043 Glutathione S-transferase, C-terminal domain LDO71_11770 PF02798 Glutathione S-transferase, N-terminal domain LDO71_11780 PF02390 Putative methyltransferase LDO71_11785 PF00043 Glutathione S-transferase, C-terminal domain LDO71_11785 PF13417 Glutathione S-transferase, N-terminal domain LDO71_11795 PF13488 Glycine zipper LDO71_11795 PF00691 OmpA family LDO71_11800 PF01979 Amidohydrolase family LDO71_11805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDO71_11805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDO71_11815 PF10672 S-adenosylmethionine-dependent methyltransferase LDO71_11815 PF02926 THUMP domain LDO71_11815 PF01170 Putative RNA methylase family UPF0020 LDO71_11830 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_11830 PF07724 AAA domain (Cdc48 subfamily) LDO71_11830 PF17871 AAA lid domain LDO71_11830 PF02861 Clp amino terminal domain, pathogenicity island component LDO71_11830 PF10431 C-terminal, D2-small domain, of ClpB protein LDO71_11845 PF02566 OsmC-like protein LDO71_11855 PF00027 Cyclic nucleotide-binding domain LDO71_11855 PF13545 Crp-like helix-turn-helix domain LDO71_11860 PF00248 Aldo/keto reductase family LDO71_11875 PF00709 Adenylosuccinate synthetase LDO71_11880 PF13393 Histidyl-tRNA synthetase LDO71_11885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDO71_11885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDO71_11890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDO71_11890 PF01411 tRNA synthetases class II (A) LDO71_11890 PF02272 DHHA1 domain LDO71_11895 PF13356 Arm DNA-binding domain LDO71_11895 PF00589 Phage integrase family LDO71_11910 PF00717 Peptidase S24-like LDO71_11915 PF13438 Domain of unknown function (DUF4113) LDO71_11915 PF11799 impB/mucB/samB family C-terminal domain LDO71_11915 PF11798 IMS family HHH motif LDO71_11915 PF00817 impB/mucB/samB family LDO71_11940 PF00872 Transposase, Mutator family LDO71_11995 PF02768 DNA polymerase III beta subunit, C-terminal domain LDO71_11995 PF02767 DNA polymerase III beta subunit, central domain LDO71_11995 PF00712 DNA polymerase III beta subunit, N-terminal domain LDO71_12155 PF07007 Lysozyme inhibitor LprI LDO71_12230 PF01695 IstB-like ATP binding protein LDO71_12240 PF00145 C-5 cytosine-specific DNA methylase LDO71_12310 PF00929 Exonuclease LDO71_12350 PF00696 Amino acid kinase family LDO71_12350 PF01842 ACT domain LDO71_12350 PF13840 ACT domain LDO71_12355 PF02599 Global regulator protein family LDO71_12360 PF01351 Ribonuclease HII LDO71_12370 PF01292 Prokaryotic cytochrome b561 LDO71_12375 PF00962 Adenosine/AMP deaminase LDO71_12380 PF00860 Permease family LDO71_12390 PF00743 Flavin-binding monooxygenase-like LDO71_12395 PF00106 short chain dehydrogenase LDO71_12405 PF02678 Pirin LDO71_12405 PF17954 Quercetinase C-terminal cupin domain LDO71_12410 PF00440 Bacterial regulatory proteins, tetR family LDO71_12410 PF17932 Tetracyclin repressor-like, C-terminal domain LDO71_12420 PF00106 short chain dehydrogenase LDO71_12425 PF00743 Flavin-binding monooxygenase-like LDO71_12430 PF04072 Leucine carboxyl methyltransferase LDO71_12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_12435 PF03466 LysR substrate binding domain LDO71_12440 PF07690 Major Facilitator Superfamily LDO71_12445 PF05681 Fumarate hydratase (Fumerase) LDO71_12450 PF05683 Fumarase C-terminus LDO71_12455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LDO71_12455 PF12833 Helix-turn-helix domain LDO71_12460 PF00743 Flavin-binding monooxygenase-like LDO71_12465 PF00106 short chain dehydrogenase LDO71_12470 PF07859 alpha/beta hydrolase fold LDO71_12475 PF05199 GMC oxidoreductase LDO71_12480 PF03573 outer membrane porin, OprD family LDO71_12485 PF07690 Major Facilitator Superfamily LDO71_12490 PF00884 Sulfatase LDO71_12495 PF03781 Sulfatase-modifying factor enzyme 1 LDO71_12505 PF00355 Rieske [2Fe-2S] domain LDO71_12510 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_12510 PF00175 Oxidoreductase NAD-binding domain LDO71_12525 PF07690 Major Facilitator Superfamily LDO71_12530 PF00378 Enoyl-CoA hydratase/isomerase LDO71_12535 PF00171 Aldehyde dehydrogenase family LDO71_12545 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_12545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_12545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_12550 PF03573 outer membrane porin, OprD family LDO71_12565 PF07519 Tannase and feruloyl esterase LDO71_12570 PF07729 FCD domain LDO71_12570 PF00392 Bacterial regulatory proteins, gntR family LDO71_12575 PF00171 Aldehyde dehydrogenase family LDO71_12580 PF00701 Dihydrodipicolinate synthetase family LDO71_12585 PF13378 Enolase C-terminal domain-like LDO71_12590 PF07690 Major Facilitator Superfamily LDO71_12595 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LDO71_12595 PF08666 SAF domain LDO71_12610 PF00809 Pterin binding enzyme LDO71_12615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO71_12615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO71_12615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO71_12615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO71_12625 PF13610 DDE domain LDO71_12635 PF03389 MobA/MobL family LDO71_12635 PF17841 BID domain of Bartonella effector protein (Bep) LDO71_12635 PF01443 Viral (Superfamily 1) RNA helicase LDO71_12655 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LDO71_12660 PF01636 Phosphotransferase enzyme family LDO71_12710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_12710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO71_12715 PF00764 Arginosuccinate synthase LDO71_12720 PF00360 Phytochrome region LDO71_12720 PF00990 Diguanylate cyclase, GGDEF domain LDO71_12720 PF00563 EAL domain LDO71_12720 PF01590 GAF domain LDO71_12725 PF01979 Amidohydrolase family LDO71_12730 PF00929 Exonuclease LDO71_12740 PF00593 TonB dependent receptor LDO71_12740 PF07715 TonB-dependent Receptor Plug Domain LDO71_12750 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_12750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO71_12755 PF00005 ABC transporter LDO71_12755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDO71_12760 PF12911 N-terminal TM domain of oligopeptide transport permease C LDO71_12760 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_12765 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_12770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDO71_12775 PF01476 LysM domain LDO71_12775 PF01464 Transglycosylase SLT domain LDO71_12775 PF01476 LysM domain LDO71_12775 PF01464 Transglycosylase SLT domain LDO71_12780 PF00929 Exonuclease LDO71_12790 PF00293 NUDIX domain LDO71_12790 PF09297 NADH pyrophosphatase zinc ribbon domain LDO71_12800 PF04972 BON domain LDO71_12805 PF02021 Uncharacterised protein family UPF0102 LDO71_12810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDO71_12820 PF03466 LysR substrate binding domain LDO71_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_12825 PF01810 LysE type translocator LDO71_12835 PF13411 MerR HTH family regulatory protein LDO71_12845 PF01494 FAD binding domain LDO71_12850 PF01494 FAD binding domain LDO71_12855 PF05195 Aminopeptidase P, N-terminal domain LDO71_12855 PF00557 Metallopeptidase family M24 LDO71_12890 PF08019 Phosphoethanolamine transferase EptA/EptB LDO71_12890 PF00884 Sulfatase LDO71_12950 PF10145 Phage-related minor tail protein LDO71_12950 PF01464 Transglycosylase SLT domain LDO71_12950 PF01551 Peptidase family M23 LDO71_13180 PF01381 Helix-turn-helix LDO71_13255 PF01812 5-formyltetrahydrofolate cyclo-ligase family LDO71_13260 PF04355 SmpA / OmlA family LDO71_13260 PF00691 OmpA family LDO71_13265 PF03895 YadA-like membrane anchor domain LDO71_13265 PF05658 Head domain of trimeric autotransporter adhesin LDO71_13265 PF13018 Extended Signal Peptide of Type V secretion system LDO71_13265 PF05662 Coiled stalk of trimeric autotransporter adhesin LDO71_13270 PF02190 ATP-dependent protease La (LON) substrate-binding domain LDO71_13270 PF05362 Lon protease (S16) C-terminal proteolytic domain LDO71_13270 PF00004 ATPase family associated with various cellular activities (AAA) LDO71_13275 PF02590 Predicted SPOUT methyltransferase LDO71_13280 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LDO71_13290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LDO71_13290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LDO71_13295 PF04060 Putative Fe-S cluster LDO71_13300 PF10576 Iron-sulfur binding domain of endonuclease III LDO71_13300 PF00730 HhH-GPD superfamily base excision DNA repair protein LDO71_13300 PF00633 Helix-hairpin-helix motif LDO71_13310 PF05191 Adenylate kinase, active site lid LDO71_13325 PF00905 Penicillin binding protein transpeptidase domain LDO71_13325 PF03717 Penicillin-binding Protein dimerisation domain LDO71_13340 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDO71_13345 PF01730 UreF LDO71_13350 PF05194 UreE urease accessory protein, C-terminal domain LDO71_13350 PF02814 UreE urease accessory protein, N-terminal domain LDO71_13355 PF01979 Amidohydrolase family LDO71_13355 PF00449 Urease alpha-subunit, N-terminal domain LDO71_13365 PF00699 Urease beta subunit LDO71_13370 PF00547 Urease, gamma subunit LDO71_13375 PF01774 UreD urease accessory protein LDO71_13390 PF00463 Isocitrate lyase family LDO71_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_13395 PF03466 LysR substrate binding domain LDO71_13400 PF01595 Cyclin M transmembrane N-terminal domain LDO71_13400 PF03471 Transporter associated domain LDO71_13400 PF00571 CBS domain LDO71_13405 PF03600 Citrate transporter LDO71_13420 PF00009 Elongation factor Tu GTP binding domain LDO71_13425 PF01507 Phosphoadenosine phosphosulfate reductase family LDO71_13435 PF14052 Capsule assembly protein Wzi LDO71_13440 PF00152 tRNA synthetases class II (D, K and N) LDO71_13440 PF01336 OB-fold nucleic acid binding domain LDO71_13455 PF00301 Rubredoxin LDO71_13460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_13460 PF18113 Rubredoxin binding C-terminal domain LDO71_13465 PF00561 alpha/beta hydrolase fold LDO71_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_13470 PF03466 LysR substrate binding domain LDO71_13485 PF13089 Polyphosphate kinase N-terminal domain LDO71_13485 PF17941 Polyphosphate kinase C-terminal domain 1 LDO71_13485 PF13090 Polyphosphate kinase C-terminal domain 2 LDO71_13485 PF02503 Polyphosphate kinase middle domain LDO71_13490 PF00912 Transglycosylase LDO71_13495 PF01694 Rhomboid family LDO71_13505 PF00005 ABC transporter LDO71_13510 PF13472 GDSL-like Lipase/Acylhydrolase family LDO71_13515 PF00484 Carbonic anhydrase LDO71_13520 PF00561 alpha/beta hydrolase fold LDO71_13530 PF00593 TonB dependent receptor LDO71_13530 PF07715 TonB-dependent Receptor Plug Domain LDO71_13535 PF01106 NifU-like domain LDO71_13535 PF01521 Iron-sulphur cluster biosynthesis LDO71_13545 PF00884 Sulfatase LDO71_13550 PF03781 Sulfatase-modifying factor enzyme 1 LDO71_13565 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_13570 PF01384 Phosphate transporter family LDO71_13575 PF00809 Pterin binding enzyme LDO71_13575 PF02574 Homocysteine S-methyltransferase LDO71_13575 PF02310 B12 binding domain LDO71_13575 PF02607 B12 binding domain LDO71_13575 PF02965 Vitamin B12 dependent methionine synthase, activation domain LDO71_13585 PF02779 Transketolase, pyrimidine binding domain LDO71_13585 PF02780 Transketolase, C-terminal domain LDO71_13590 PF00456 Transketolase, thiamine diphosphate binding domain LDO71_13595 PF07690 Major Facilitator Superfamily LDO71_13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_13605 PF03466 LysR substrate binding domain LDO71_13615 PF01263 Aldose 1-epimerase LDO71_13620 PF07690 Major Facilitator Superfamily LDO71_13625 PF07883 Cupin domain LDO71_13625 PF12833 Helix-turn-helix domain LDO71_13630 PF04960 Glutaminase LDO71_13635 PF01327 Polypeptide deformylase LDO71_13640 PF07690 Major Facilitator Superfamily LDO71_13650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDO71_13650 PF00205 Thiamine pyrophosphate enzyme, central domain LDO71_13650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDO71_13655 PF00171 Aldehyde dehydrogenase family LDO71_13660 PF01958 Domain of unknown function DUF108 LDO71_13660 PF03447 Homoserine dehydrogenase, NAD binding domain LDO71_13670 PF12697 Alpha/beta hydrolase family LDO71_13680 PF07690 Major Facilitator Superfamily LDO71_13685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_13685 PF14759 Reductase C-terminal LDO71_13690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDO71_13700 PF00355 Rieske [2Fe-2S] domain LDO71_13710 PF00355 Rieske [2Fe-2S] domain LDO71_13715 PF09339 IclR helix-turn-helix domain LDO71_13715 PF01614 Bacterial transcriptional regulator LDO71_13730 PF00378 Enoyl-CoA hydratase/isomerase LDO71_13740 PF00535 Glycosyl transferase family 2 LDO71_13745 PF14883 Hypothetical glycosyl hydrolase family 13 LDO71_13745 PF01522 Polysaccharide deacetylase LDO71_13750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO71_13755 PF07152 YaeQ protein LDO71_13760 PF00375 Sodium:dicarboxylate symporter family LDO71_13765 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDO71_13765 PF07683 Cobalamin synthesis protein cobW C-terminal domain LDO71_13775 PF03061 Thioesterase superfamily LDO71_13785 PF02028 BCCT, betaine/carnitine/choline family transporter LDO71_13790 PF02028 BCCT, betaine/carnitine/choline family transporter LDO71_13795 PF00440 Bacterial regulatory proteins, tetR family LDO71_13795 PF13977 BetI-type transcriptional repressor, C-terminal LDO71_13800 PF00171 Aldehyde dehydrogenase family LDO71_13805 PF05199 GMC oxidoreductase LDO71_13805 PF00732 GMC oxidoreductase LDO71_13810 PF06039 Malate:quinone oxidoreductase (Mqo) LDO71_13820 PF02574 Homocysteine S-methyltransferase LDO71_13825 PF13520 Amino acid permease LDO71_13850 PF00701 Dihydrodipicolinate synthetase family LDO71_13855 PF00083 Sugar (and other) transporter LDO71_13900 PF07690 Major Facilitator Superfamily LDO71_13905 PF13533 Biotin-lipoyl like LDO71_13910 PF03061 Thioesterase superfamily LDO71_13915 PF00490 Delta-aminolevulinic acid dehydratase LDO71_13920 PF01266 FAD dependent oxidoreductase LDO71_13925 PF08338 Domain of unknown function (DUF1731) LDO71_13925 PF01370 NAD dependent epimerase/dehydratase family LDO71_13945 PF00149 Calcineurin-like phosphoesterase LDO71_13945 PF12320 Type 5 capsule protein repressor C-terminal domain LDO71_13955 PF01168 Alanine racemase, N-terminal domain LDO71_13960 PF00437 Type II/IV secretion system protein LDO71_13965 PF00437 Type II/IV secretion system protein LDO71_13970 PF01475 Ferric uptake regulator family LDO71_13975 PF04355 SmpA / OmlA family LDO71_13980 PF03658 RnfH family Ubiquitin LDO71_13990 PF01814 Hemerythrin HHE cation binding domain LDO71_13995 PF13230 Glutamine amidotransferases class-II LDO71_14005 PF00696 Amino acid kinase family LDO71_14010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO71_14010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO71_14010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO71_14010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO71_14015 PF00692 dUTPase LDO71_14020 PF00580 UvrD/REP helicase N-terminal domain LDO71_14020 PF13361 UvrD-like helicase C-terminal domain LDO71_14025 PF00691 OmpA family LDO71_14025 PF13488 Glycine zipper LDO71_14030 PF01553 Acyltransferase LDO71_14040 PF03775 Septum formation inhibitor MinC, C-terminal domain LDO71_14045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDO71_14050 PF03776 Septum formation topological specificity factor MinE LDO71_14060 PF01810 LysE type translocator LDO71_14065 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LDO71_14065 PF17854 FtsK alpha domain LDO71_14065 PF09397 Ftsk gamma domain LDO71_14065 PF01580 FtsK/SpoIIIE family LDO71_14070 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_14075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LDO71_14080 PF04376 Arginine-tRNA-protein transferase, N terminus LDO71_14080 PF04377 Arginine-tRNA-protein transferase, C terminus LDO71_14085 PF00583 Acetyltransferase (GNAT) family LDO71_14100 PF00009 Elongation factor Tu GTP binding domain LDO71_14100 PF03144 Elongation factor Tu domain 2 LDO71_14100 PF03143 Elongation factor Tu C-terminal domain LDO71_14105 PF03144 Elongation factor Tu domain 2 LDO71_14105 PF00009 Elongation factor Tu GTP binding domain LDO71_14105 PF03764 Elongation factor G, domain IV LDO71_14105 PF00679 Elongation factor G C-terminus LDO71_14105 PF14492 Elongation Factor G, domain II LDO71_14110 PF00177 Ribosomal protein S7p/S5e LDO71_14115 PF00164 Ribosomal protein S12/S23 LDO71_14125 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_14125 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_14130 PF03653 Uncharacterised protein family (UPF0093) LDO71_14145 PF02540 NAD synthase LDO71_14145 PF00795 Carbon-nitrogen hydrolase LDO71_14160 PF00970 Oxidoreductase FAD-binding domain LDO71_14160 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO71_14160 PF00175 Oxidoreductase NAD-binding domain LDO71_14165 PF00171 Aldehyde dehydrogenase family LDO71_14170 PF00355 Rieske [2Fe-2S] domain LDO71_14170 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDO71_14175 PF07859 alpha/beta hydrolase fold LDO71_14180 PF02028 BCCT, betaine/carnitine/choline family transporter LDO71_14185 PF00180 Isocitrate/isopropylmalate dehydrogenase LDO71_14190 PF03466 LysR substrate binding domain LDO71_14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_14210 PF00037 4Fe-4S binding domain LDO71_14215 PF01467 Cytidylyltransferase-like LDO71_14220 PF01668 SmpB protein LDO71_14225 PF03358 NADPH-dependent FMN reductase LDO71_14230 PF02578 Multi-copper polyphenol oxidoreductase laccase LDO71_14235 PF00849 RNA pseudouridylate synthase LDO71_14235 PF01479 S4 domain LDO71_14240 PF13525 Outer membrane lipoprotein LDO71_14245 PF01807 CHC2 zinc finger LDO71_14245 PF08275 DNA primase catalytic core, N-terminal domain LDO71_14245 PF10410 DnaB-helicase binding domain of primase LDO71_14245 PF08278 DNA primase DnaG DnaB-binding LDO71_14250 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LDO71_14250 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LDO71_14250 PF01488 Shikimate / quinate 5-dehydrogenase LDO71_14260 PF03550 Outer membrane lipoprotein LolB LDO71_14265 PF00288 GHMP kinases N terminal domain LDO71_14265 PF08544 GHMP kinases C terminal LDO71_14290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDO71_14290 PF14572 Phosphoribosyl synthetase-associated domain LDO71_14295 PF01386 Ribosomal L25p family LDO71_14300 PF01195 Peptidyl-tRNA hydrolase LDO71_14305 PF02261 Aspartate decarboxylase LDO71_14320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDO71_14330 PF02581 Thiamine monophosphate synthase LDO71_14330 PF08543 Phosphomethylpyrimidine kinase LDO71_14330 PF03070 TENA/THI-4/PQQC family LDO71_14335 PF04972 BON domain LDO71_14335 PF01476 LysM domain LDO71_14340 PF00550 Phosphopantetheine attachment site LDO71_14350 PF00698 Acyl transferase domain LDO71_14355 PF01783 Ribosomal L32p protein family LDO71_14360 PF02620 Large ribosomal RNA subunit accumulation protein YceD LDO71_14365 PF04315 Elongation factor P hydroxylase LDO71_14370 PF01300 Telomere recombination LDO71_14375 PF02616 Segregation and condensation protein ScpA LDO71_14380 PF04079 Segregation and condensation complex subunit ScpB LDO71_14385 PF01479 S4 domain LDO71_14385 PF00849 RNA pseudouridylate synthase LDO71_14400 PF00155 Aminotransferase class I and II LDO71_14405 PF00202 Aminotransferase class-III LDO71_14405 PF06968 Biotin and Thiamin Synthesis associated domain LDO71_14405 PF04055 Radical SAM superfamily LDO71_14410 PF08241 Methyltransferase domain LDO71_14410 PF12697 Alpha/beta hydrolase family LDO71_14415 PF02358 Trehalose-phosphatase LDO71_14420 PF00982 Glycosyltransferase family 20 LDO71_14425 PF07690 Major Facilitator Superfamily LDO71_14430 PF00210 Ferritin-like domain LDO71_14435 PF00533 BRCA1 C Terminus (BRCT) domain LDO71_14435 PF01653 NAD-dependent DNA ligase adenylation domain LDO71_14435 PF03120 NAD-dependent DNA ligase OB-fold domain LDO71_14435 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDO71_14435 PF12826 Helix-hairpin-helix motif LDO71_14445 PF02463 RecF/RecN/SMC N terminal domain LDO71_14445 PF06470 SMC proteins Flexible Hinge Domain LDO71_14455 PF01925 Sulfite exporter TauE/SafE LDO71_14465 PF03309 Type III pantothenate kinase LDO71_14470 PF00448 SRP54-type protein, GTPase domain LDO71_14470 PF02881 SRP54-type protein, helical bundle domain LDO71_14470 PF02978 Signal peptide binding domain LDO71_14480 PF01207 Dihydrouridine synthase (Dus) LDO71_14510 PF00692 dUTPase LDO71_14525 PF01048 Phosphorylase superfamily LDO71_14530 PF10609 NUBPL iron-transfer P-loop NTPase LDO71_14540 PF09334 tRNA synthetases class I (M) LDO71_14540 PF01588 Putative tRNA binding domain LDO71_14565 PF13533 Biotin-lipoyl like LDO71_14570 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_14585 PF05552 Conserved TM helix LDO71_14600 PF00970 Oxidoreductase FAD-binding domain LDO71_14600 PF00175 Oxidoreductase NAD-binding domain LDO71_14605 PF03466 LysR substrate binding domain LDO71_14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_14610 PF00313 'Cold-shock' DNA-binding domain LDO71_14620 PF00361 Proton-conducting membrane transporter LDO71_14625 PF00361 Proton-conducting membrane transporter LDO71_14630 PF00361 Proton-conducting membrane transporter LDO71_14630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDO71_14635 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDO71_14640 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LDO71_14645 PF12838 4Fe-4S dicluster domain LDO71_14650 PF00146 NADH dehydrogenase LDO71_14655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LDO71_14655 PF00384 Molybdopterin oxidoreductase LDO71_14655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDO71_14660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDO71_14660 PF10531 SLBB domain LDO71_14660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDO71_14670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDO71_14670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDO71_14675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDO71_14680 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LDO71_14685 PF00990 Diguanylate cyclase, GGDEF domain LDO71_14685 PF17151 Periplasmic sensor domain LDO71_14695 PF00672 HAMP domain LDO71_14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_14695 PF00512 His Kinase A (phospho-acceptor) domain LDO71_14700 PF00072 Response regulator receiver domain LDO71_14700 PF00486 Transcriptional regulatory protein, C terminal LDO71_14710 PF03477 ATP cone domain LDO71_14710 PF02867 Ribonucleotide reductase, barrel domain LDO71_14710 PF00317 Ribonucleotide reductase, all-alpha domain LDO71_14720 PF00268 Ribonucleotide reductase, small chain LDO71_14735 PF17074 Darcynin, domain of unknown function LDO71_14775 PF01613 Flavin reductase like domain LDO71_14780 PF01717 Cobalamin-independent synthase, Catalytic domain LDO71_14780 PF08267 Cobalamin-independent synthase, N-terminal domain LDO71_14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_14790 PF03466 LysR substrate binding domain LDO71_14795 PF01810 LysE type translocator LDO71_14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_14800 PF03466 LysR substrate binding domain LDO71_14805 PF07690 Major Facilitator Superfamily LDO71_14815 PF03466 LysR substrate binding domain LDO71_14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_14820 PF14537 Cytochrome c3 LDO71_14820 PF00890 FAD binding domain LDO71_14830 PF02515 CoA-transferase family III LDO71_14835 PF07690 Major Facilitator Superfamily LDO71_14840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_14840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_14840 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_14845 PF03466 LysR substrate binding domain LDO71_14850 PF00107 Zinc-binding dehydrogenase LDO71_14850 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_14855 PF00962 Adenosine/AMP deaminase LDO71_14880 PF02445 Quinolinate synthetase A protein LDO71_14885 PF01960 ArgJ family LDO71_14890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDO71_14890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDO71_14895 PF00893 Small Multidrug Resistance protein LDO71_14910 PF00394 Multicopper oxidase LDO71_14910 PF07732 Multicopper oxidase LDO71_14910 PF07731 Multicopper oxidase LDO71_14925 PF00834 Ribulose-phosphate 3 epimerase family LDO71_14935 PF00756 Putative esterase LDO71_14945 PF04445 Putative SAM-dependent methyltransferase LDO71_14950 PF00814 Glycoprotease family LDO71_14955 PF00132 Bacterial transferase hexapeptide (six repeats) LDO71_14960 PF00293 NUDIX domain LDO71_15000 PF04715 Anthranilate synthase component I, N terminal region LDO71_15000 PF00425 chorismate binding enzyme LDO71_15005 PF00155 Aminotransferase class I and II LDO71_15010 PF00815 Histidinol dehydrogenase LDO71_15015 PF01634 ATP phosphoribosyltransferase LDO71_15020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDO71_15025 PF01722 BolA-like protein LDO71_15030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDO71_15035 PF00309 Sigma-54 factor, Activator interacting domain (AID) LDO71_15035 PF04963 Sigma-54 factor, core binding domain LDO71_15035 PF04552 Sigma-54, DNA binding domain LDO71_15080 PF00795 Carbon-nitrogen hydrolase LDO71_15090 PF01047 MarR family LDO71_15095 PF02566 OsmC-like protein LDO71_15100 PF00437 Type II/IV secretion system protein LDO71_15120 PF01367 5'-3' exonuclease, C-terminal SAM fold LDO71_15120 PF01612 3'-5' exonuclease LDO71_15120 PF00476 DNA polymerase family A LDO71_15120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDO71_15125 PF02325 YGGT family LDO71_15130 PF03807 NADP oxidoreductase coenzyme F420-dependent LDO71_15130 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDO71_15135 PF01171 PP-loop family LDO71_15135 PF09179 TilS substrate binding domain LDO71_15135 PF11734 TilS substrate C-terminal domain LDO71_15140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDO71_15145 PF02541 Ppx/GppA phosphatase family LDO71_15150 PF00085 Thioredoxin LDO71_15155 PF07497 Rho termination factor, RNA-binding domain LDO71_15155 PF07498 Rho termination factor, N-terminal domain LDO71_15155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDO71_15170 PF00216 Bacterial DNA-binding protein LDO71_15175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDO71_15175 PF03484 tRNA synthetase B5 domain LDO71_15175 PF03483 B3/4 domain LDO71_15175 PF01588 Putative tRNA binding domain LDO71_15175 PF03147 Ferredoxin-fold anticodon binding domain LDO71_15180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDO71_15180 PF01409 tRNA synthetases class II core domain (F) LDO71_15200 PF00453 Ribosomal protein L20 LDO71_15205 PF01632 Ribosomal protein L35 LDO71_15215 PF07690 Major Facilitator Superfamily LDO71_15220 PF09335 SNARE associated Golgi protein LDO71_15225 PF02798 Glutathione S-transferase, N-terminal domain LDO71_15225 PF00043 Glutathione S-transferase, C-terminal domain LDO71_15230 PF05198 Translation initiation factor IF-3, N-terminal domain LDO71_15230 PF00707 Translation initiation factor IF-3, C-terminal domain LDO71_15235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDO71_15235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDO71_15235 PF02824 TGS domain LDO71_15235 PF03129 Anticodon binding domain LDO71_15240 PF00501 AMP-binding enzyme LDO71_15240 PF13193 AMP-binding enzyme C-terminal domain LDO71_15245 PF04751 Protein of unknown function (DUF615) LDO71_15250 PF00381 PTS HPr component phosphorylation site LDO71_15255 PF03668 P-loop ATPase protein family LDO71_15260 PF02569 Pantoate-beta-alanine ligase LDO71_15265 PF02548 Ketopantoate hydroxymethyltransferase LDO71_15270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDO71_15275 PF12627 Probable RNA and SrmB- binding site of polymerase A LDO71_15275 PF01743 Poly A polymerase head domain LDO71_15275 PF12626 Polymerase A arginine-rich C-terminus LDO71_15285 PF03819 MazG nucleotide pyrophosphohydrolase domain LDO71_15295 PF02824 TGS domain LDO71_15295 PF04607 Region found in RelA / SpoT proteins LDO71_15295 PF13291 ACT domain LDO71_15300 PF05958 tRNA (Uracil-5-)-methyltransferase LDO71_15310 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_15315 PF00072 Response regulator receiver domain LDO71_15315 PF00672 HAMP domain LDO71_15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_15315 PF00512 His Kinase A (phospho-acceptor) domain LDO71_15315 PF01627 Hpt domain LDO71_15315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDO71_15320 PF00378 Enoyl-CoA hydratase/isomerase LDO71_15325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDO71_15325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDO71_15330 PF01261 Xylose isomerase-like TIM barrel LDO71_15345 PF00106 short chain dehydrogenase LDO71_15350 PF02233 NAD(P) transhydrogenase beta subunit LDO71_15355 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LDO71_15360 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LDO71_15360 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LDO71_15365 PF00892 EamA-like transporter family LDO71_15375 PF07690 Major Facilitator Superfamily LDO71_15380 PF01207 Dihydrouridine synthase (Dus) LDO71_15390 PF03466 LysR substrate binding domain LDO71_15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_15400 PF00899 ThiF family LDO71_15405 PF00330 Aconitase family (aconitate hydratase) LDO71_15405 PF00694 Aconitase C-terminal domain LDO71_15410 PF01026 TatD related DNase LDO71_15425 PF00009 Elongation factor Tu GTP binding domain LDO71_15425 PF16658 Class II release factor RF3, C-terminal domain LDO71_15425 PF03144 Elongation factor Tu domain 2 LDO71_15440 PF04151 Bacterial pre-peptidase C-terminal domain LDO71_15450 PF16884 N-terminal domain of oxidoreductase LDO71_15450 PF00107 Zinc-binding dehydrogenase LDO71_15455 PF16925 Tetracyclin repressor-like, C-terminal domain LDO71_15455 PF00440 Bacterial regulatory proteins, tetR family LDO71_15475 PF00465 Iron-containing alcohol dehydrogenase LDO71_15485 PF00756 Putative esterase LDO71_15490 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_15490 PF00107 Zinc-binding dehydrogenase LDO71_15495 PF02583 Metal-sensitive transcriptional repressor LDO71_15500 PF16197 Ketoacyl-synthetase C-terminal extension LDO71_15500 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_15500 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_15500 PF08659 KR domain LDO71_15500 PF00550 Phosphopantetheine attachment site LDO71_15500 PF14765 Polyketide synthase dehydratase LDO71_15500 PF00698 Acyl transferase domain LDO71_15500 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_15505 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_15505 PF00107 Zinc-binding dehydrogenase LDO71_15510 PF03466 LysR substrate binding domain LDO71_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_15515 PF00106 short chain dehydrogenase LDO71_15535 PF02661 Fic/DOC family LDO71_15535 PF13784 Fic/DOC family N-terminal LDO71_15555 PF01420 Type I restriction modification DNA specificity domain LDO71_15560 PF12161 HsdM N-terminal domain LDO71_15560 PF02384 N-6 DNA Methylase LDO71_15670 PF04717 Type VI secretion system, phage-baseplate injector LDO71_15670 PF13296 Putative type VI secretion system Rhs element Vgr LDO71_15670 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDO71_15690 PF03707 Bacterial signalling protein N terminal repeat LDO71_15690 PF00990 Diguanylate cyclase, GGDEF domain LDO71_15690 PF00563 EAL domain LDO71_15695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LDO71_15695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LDO71_15700 PF10369 Small subunit of acetolactate synthase LDO71_15705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDO71_15705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDO71_15705 PF00205 Thiamine pyrophosphate enzyme, central domain LDO71_15715 PF08264 Anticodon-binding domain of tRNA LDO71_15715 PF00133 tRNA synthetases class I (I, L, M and V) LDO71_15715 PF13603 Leucyl-tRNA synthetase, Domain 2 LDO71_15715 PF09334 tRNA synthetases class I (M) LDO71_15730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_15735 PF02687 FtsX-like permease family LDO71_15735 PF00005 ABC transporter LDO71_15735 PF12704 MacB-like periplasmic core domain LDO71_15740 PF02321 Outer membrane efflux protein LDO71_15755 PF00929 Exonuclease LDO71_15760 PF03193 RsgA GTPase LDO71_15770 PF00462 Glutaredoxin LDO71_15775 PF02556 Preprotein translocase subunit SecB LDO71_15790 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_15790 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_15805 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_15805 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_15815 PF04820 Tryptophan halogenase LDO71_15835 PF00221 Aromatic amino acid lyase LDO71_15845 PF00535 Glycosyl transferase family 2 LDO71_15850 PF13193 AMP-binding enzyme C-terminal domain LDO71_15850 PF00501 AMP-binding enzyme LDO71_15860 PF00550 Phosphopantetheine attachment site LDO71_15865 PF00550 Phosphopantetheine attachment site LDO71_15880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDO71_15880 PF01926 50S ribosome-binding GTPase LDO71_15885 PF13360 PQQ-like domain LDO71_15895 PF03129 Anticodon binding domain LDO71_15895 PF13393 Histidyl-tRNA synthetase LDO71_15900 PF04551 GcpE protein LDO71_15905 PF13464 Domain of unknown function (DUF4115) LDO71_15915 PF04055 Radical SAM superfamily LDO71_15920 PF00334 Nucleoside diphosphate kinase LDO71_15925 PF04384 Iron-sulphur cluster assembly LDO71_15930 PF01569 PAP2 superfamily LDO71_15935 PF13439 Glycosyltransferase Family 4 LDO71_15935 PF00534 Glycosyl transferases group 1 LDO71_15940 PF11818 C-terminal domain of tail specific protease (DUF3340) LDO71_15940 PF00595 PDZ domain LDO71_15940 PF03572 Peptidase family S41 LDO71_15940 PF17804 Tail specific protease N-terminal domain LDO71_15945 PF00933 Glycosyl hydrolase family 3 N terminal domain LDO71_15955 PF00561 alpha/beta hydrolase fold LDO71_15960 PF00171 Aldehyde dehydrogenase family LDO71_15965 PF00171 Aldehyde dehydrogenase family LDO71_15970 PF01202 Shikimate kinase LDO71_15975 PF02447 GntP family permease LDO71_15980 PF01081 KDPG and KHG aldolase LDO71_15985 PF00920 Dehydratase family LDO71_15990 PF00871 Acetokinase family LDO71_15995 PF07085 DRTGG domain LDO71_15995 PF01515 Phosphate acetyl/butaryl transferase LDO71_16000 PF05681 Fumarate hydratase (Fumerase) LDO71_16000 PF05683 Fumarase C-terminus LDO71_16015 PF07724 AAA domain (Cdc48 subfamily) LDO71_16015 PF10431 C-terminal, D2-small domain, of ClpB protein LDO71_16015 PF06689 ClpX C4-type zinc finger LDO71_16020 PF00574 Clp protease LDO71_16025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO71_16025 PF05697 Bacterial trigger factor protein (TF) LDO71_16025 PF05698 Bacterial trigger factor protein (TF) C-terminus LDO71_16030 PF07715 TonB-dependent Receptor Plug Domain LDO71_16030 PF00593 TonB dependent receptor LDO71_16035 PF18331 PKHD-type hydroxylase C-terminal domain LDO71_16035 PF13640 2OG-Fe(II) oxygenase superfamily LDO71_16040 PF00682 HMGL-like LDO71_16040 PF08502 LeuA allosteric (dimerisation) domain LDO71_16045 PF00561 alpha/beta hydrolase fold LDO71_16050 PF00561 alpha/beta hydrolase fold LDO71_16050 PF07021 Methionine biosynthesis protein MetW LDO71_16060 PF01725 Ham1 family LDO71_16070 PF02416 mttA/Hcf106 family LDO71_16075 PF02416 mttA/Hcf106 family LDO71_16080 PF00902 Sec-independent protein translocase protein (TatC) LDO71_16100 PF01790 Prolipoprotein diacylglyceryl transferase LDO71_16115 PF00303 Thymidylate synthase LDO71_16120 PF00186 Dihydrofolate reductase LDO71_16130 PF01625 Peptide methionine sulfoxide reductase LDO71_16140 PF01618 MotA/TolQ/ExbB proton channel family LDO71_16150 PF01842 ACT domain LDO71_16150 PF00551 Formyl transferase LDO71_16160 PF00171 Aldehyde dehydrogenase family LDO71_16165 PF00830 Ribosomal L28 family LDO71_16170 PF00471 Ribosomal protein L33 LDO71_16175 PF00999 Sodium/hydrogen exchanger family LDO71_16175 PF02254 TrkA-N domain LDO71_16195 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LDO71_16200 PF00580 UvrD/REP helicase N-terminal domain LDO71_16200 PF13361 UvrD-like helicase C-terminal domain LDO71_16215 PF08272 Topoisomerase I zinc-ribbon-like LDO71_16215 PF01131 DNA topoisomerase LDO71_16215 PF01751 Toprim domain LDO71_16215 PF01396 Topoisomerase DNA binding C4 zinc finger LDO71_16225 PF01638 HxlR-like helix-turn-helix LDO71_16230 PF00107 Zinc-binding dehydrogenase LDO71_16230 PF08240 Alcohol dehydrogenase GroES-like domain LDO71_16235 PF04102 SlyX LDO71_16240 PF12848 ABC transporter LDO71_16240 PF16326 ABC transporter C-terminal domain LDO71_16240 PF00005 ABC transporter LDO71_16245 PF01810 LysE type translocator LDO71_16250 PF03279 Bacterial lipid A biosynthesis acyltransferase LDO71_16260 PF00375 Sodium:dicarboxylate symporter family LDO71_16270 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDO71_16270 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDO71_16285 PF00710 Asparaginase, N-terminal LDO71_16285 PF17763 Glutaminase/Asparaginase C-terminal domain LDO71_16290 PF01416 tRNA pseudouridine synthase LDO71_16300 PF01176 Translation initiation factor 1A / IF-1 LDO71_16315 PF00180 Isocitrate/isopropylmalate dehydrogenase LDO71_16325 PF00694 Aconitase C-terminal domain LDO71_16330 PF00330 Aconitase family (aconitate hydratase) LDO71_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_16340 PF03466 LysR substrate binding domain LDO71_16360 PF00293 NUDIX domain LDO71_16365 PF01590 GAF domain LDO71_16365 PF05524 PEP-utilising enzyme, N-terminal LDO71_16365 PF00391 PEP-utilising enzyme, mobile domain LDO71_16365 PF02896 PEP-utilising enzyme, TIM barrel domain LDO71_16370 PF00141 Peroxidase LDO71_16375 PF12706 Beta-lactamase superfamily domain LDO71_16380 PF03466 LysR substrate binding domain LDO71_16380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_16390 PF02798 Glutathione S-transferase, N-terminal domain LDO71_16395 PF08279 HTH domain LDO71_16395 PF13280 WYL domain LDO71_16400 PF13419 Haloacid dehalogenase-like hydrolase LDO71_16405 PF00849 RNA pseudouridylate synthase LDO71_16405 PF01479 S4 domain LDO71_16410 PF00575 S1 RNA binding domain LDO71_16410 PF12111 Polyribonucleotide phosphorylase C terminal LDO71_16410 PF10150 Ribonuclease E/G family LDO71_16415 PF00501 AMP-binding enzyme LDO71_16415 PF13193 AMP-binding enzyme C-terminal domain LDO71_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_16430 PF03466 LysR substrate binding domain LDO71_16435 PF00106 short chain dehydrogenase LDO71_16440 PF06969 HemN C-terminal domain LDO71_16440 PF04055 Radical SAM superfamily LDO71_16450 PF01554 MatE LDO71_16455 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LDO71_16455 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_16455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_16460 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LDO71_16460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_16465 PF03109 ABC1 family LDO71_16470 PF01197 Ribosomal protein L31 LDO71_16485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDO71_16495 PF13247 4Fe-4S dicluster domain LDO71_16495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDO71_16495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO71_16505 PF03884 DNA gyrase inhibitor YacG LDO71_16510 PF00753 Metallo-beta-lactamase superfamily LDO71_16515 PF00762 Ferrochelatase LDO71_16525 PF01177 Asp/Glu/Hydantoin racemase LDO71_16540 PF01206 Sulfurtransferase TusA LDO71_16545 PF00571 CBS domain LDO71_16545 PF03471 Transporter associated domain LDO71_16550 PF00795 Carbon-nitrogen hydrolase LDO71_16555 PF01588 Putative tRNA binding domain LDO71_16565 PF07963 Prokaryotic N-terminal methylation motif LDO71_16565 PF08334 Type II secretion system (T2SS), protein G LDO71_16570 PF00482 Type II secretion system (T2SS), protein F LDO71_16575 PF00270 DEAD/DEAH box helicase LDO71_16575 PF00271 Helicase conserved C-terminal domain LDO71_16575 PF18074 Primosomal protein N C-terminal domain LDO71_16575 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDO71_16575 PF17764 3′ DNA-binding domain (3′BD) LDO71_16580 PF00999 Sodium/hydrogen exchanger family LDO71_16580 PF02254 TrkA-N domain LDO71_16585 PF01430 Hsp33 protein LDO71_16595 PF01556 DnaJ C terminal domain LDO71_16595 PF00226 DnaJ domain LDO71_16605 PF01544 CorA-like Mg2+ transporter protein LDO71_16610 PF00575 S1 RNA binding domain LDO71_16610 PF00013 KH domain LDO71_16610 PF01138 3' exoribonuclease family, domain 1 LDO71_16610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LDO71_16610 PF03725 3' exoribonuclease family, domain 2 LDO71_16615 PF00312 Ribosomal protein S15 LDO71_16620 PF00144 Beta-lactamase LDO71_16625 PF13538 UvrD-like helicase C-terminal domain LDO71_16630 PF12705 PD-(D/E)XK nuclease superfamily LDO71_16630 PF00580 UvrD/REP helicase N-terminal domain LDO71_16630 PF13361 UvrD-like helicase C-terminal domain LDO71_16635 PF17946 RecC C-terminal domain LDO71_16645 PF03976 Polyphosphate kinase 2 (PPK2) LDO71_16655 PF01209 ubiE/COQ5 methyltransferase family LDO71_16665 PF03109 ABC1 family LDO71_16670 PF01494 FAD binding domain LDO71_16675 PF01502 Phosphoribosyl-AMP cyclohydrolase LDO71_16690 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LDO71_16690 PF00361 Proton-conducting membrane transporter LDO71_16690 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDO71_16690 PF13244 Domain of unknown function (DUF4040) LDO71_16695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDO71_16700 PF00361 Proton-conducting membrane transporter LDO71_16705 PF01899 Na+/H+ ion antiporter subunit LDO71_16710 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LDO71_16715 PF03334 Na+/H+ antiporter subunit LDO71_16720 PF02033 Ribosome-binding factor A LDO71_16725 PF04760 Translation initiation factor IF-2, N-terminal region LDO71_16725 PF00009 Elongation factor Tu GTP binding domain LDO71_16725 PF11987 Translation-initiation factor 2 LDO71_16725 PF08364 Bacterial translation initiation factor IF-2 associated region LDO71_16730 PF08529 NusA N-terminal domain LDO71_16730 PF13184 NusA-like KH domain LDO71_16730 PF00575 S1 RNA binding domain LDO71_16735 PF02576 RimP N-terminal domain LDO71_16735 PF17384 RimP C-terminal SH3 domain LDO71_16755 PF03840 Preprotein translocase SecG subunit LDO71_16760 PF00121 Triosephosphate isomerase LDO71_16765 PF00437 Type II/IV secretion system protein LDO71_16765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDO71_16770 PF00482 Type II secretion system (T2SS), protein F LDO71_16780 PF06750 Bacterial Peptidase A24 N-terminal domain LDO71_16780 PF01478 Type IV leader peptidase family LDO71_16785 PF01121 Dephospho-CoA kinase LDO71_16795 PF00588 SpoU rRNA Methylase family LDO71_16795 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDO71_16800 PF06865 Pyrimidine/purine nucleoside phosphorylase LDO71_16810 PF02463 RecF/RecN/SMC N terminal domain LDO71_16815 PF02622 Uncharacterized ACR, COG1678 LDO71_16820 PF03652 Holliday junction resolvase LDO71_16825 PF13533 Biotin-lipoyl like LDO71_16850 PF02805 Metal binding domain of Ada LDO71_16850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDO71_16850 PF12833 Helix-turn-helix domain LDO71_16850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDO71_16855 PF01066 CDP-alcohol phosphatidyltransferase LDO71_16865 PF01541 GIY-YIG catalytic domain LDO71_16865 PF02151 UvrB/uvrC motif LDO71_16865 PF08459 UvrC Helix-hairpin-helix N-terminal LDO71_16880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO71_16880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO71_16880 PF00378 Enoyl-CoA hydratase/isomerase LDO71_16885 PF00108 Thiolase, N-terminal domain LDO71_16885 PF02803 Thiolase, C-terminal domain LDO71_16900 PF00376 MerR family regulatory protein LDO71_16900 PF09278 MerR, DNA binding LDO71_16910 PF01323 DSBA-like thioredoxin domain LDO71_16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_16925 PF00183 Hsp90 protein LDO71_16940 PF13726 Na+-H+ antiporter family LDO71_16940 PF03553 Na+/H+ antiporter family LDO71_16945 PF00561 alpha/beta hydrolase fold LDO71_16965 PF05000 RNA polymerase Rpb1, domain 4 LDO71_16965 PF00623 RNA polymerase Rpb1, domain 2 LDO71_16965 PF04983 RNA polymerase Rpb1, domain 3 LDO71_16965 PF04998 RNA polymerase Rpb1, domain 5 LDO71_16965 PF04997 RNA polymerase Rpb1, domain 1 LDO71_16970 PF04563 RNA polymerase beta subunit LDO71_16970 PF04561 RNA polymerase Rpb2, domain 2 LDO71_16970 PF10385 RNA polymerase beta subunit external 1 domain LDO71_16970 PF00562 RNA polymerase Rpb2, domain 6 LDO71_16970 PF04560 RNA polymerase Rpb2, domain 7 LDO71_16970 PF04565 RNA polymerase Rpb2, domain 3 LDO71_16975 PF00542 Ribosomal protein L7/L12 C-terminal domain LDO71_16975 PF16320 Ribosomal protein L7/L12 dimerisation domain LDO71_16980 PF00466 Ribosomal protein L10 LDO71_16985 PF00687 Ribosomal protein L1p/L10e family LDO71_16990 PF00298 Ribosomal protein L11, RNA binding domain LDO71_16990 PF03946 Ribosomal protein L11, N-terminal domain LDO71_16995 PF00467 KOW motif LDO71_16995 PF02357 Transcription termination factor nusG LDO71_17000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LDO71_17010 PF03143 Elongation factor Tu C-terminal domain LDO71_17010 PF03144 Elongation factor Tu domain 2 LDO71_17010 PF00009 Elongation factor Tu GTP binding domain LDO71_17035 PF04715 Anthranilate synthase component I, N terminal region LDO71_17035 PF00425 chorismate binding enzyme LDO71_17040 PF13419 Haloacid dehalogenase-like hydrolase LDO71_17045 PF12401 Protein of unknown function (DUF2662) LDO71_17045 PF00498 FHA domain LDO71_17050 PF00263 Bacterial type II and III secretion system protein LDO71_17050 PF03958 Bacterial type II/III secretion system short domain LDO71_17065 PF00816 H-NS histone family LDO71_17090 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LDO71_17090 PF03900 Porphobilinogen deaminase, C-terminal domain LDO71_17095 PF04397 LytTr DNA-binding domain LDO71_17095 PF00072 Response regulator receiver domain LDO71_17100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_17100 PF07694 5TMR of 5TMR-LYT LDO71_17100 PF06580 Histidine kinase LDO71_17105 PF14698 Argininosuccinate lyase C-terminal LDO71_17105 PF00206 Lyase LDO71_17110 PF04362 Bacterial Fe(2+) trafficking LDO71_17115 PF01895 PhoU domain LDO71_17120 PF02321 Outer membrane efflux protein LDO71_17130 PF00892 EamA-like transporter family LDO71_17145 PF01964 Radical SAM ThiC family LDO71_17145 PF13667 ThiC-associated domain LDO71_17150 PF00293 NUDIX domain LDO71_17155 PF00149 Calcineurin-like phosphoesterase LDO71_17160 PF01258 Prokaryotic dksA/traR C4-type zinc finger LDO71_17165 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDO71_17170 PF01098 Cell cycle protein LDO71_17175 PF02875 Mur ligase family, glutamate ligase domain LDO71_17175 PF08245 Mur ligase middle domain LDO71_17185 PF07664 Ferrous iron transport protein B C terminus LDO71_17185 PF02421 Ferrous iron transport protein B LDO71_17185 PF07670 Nucleoside recognition LDO71_17195 PF02899 Phage integrase, N-terminal SAM-like domain LDO71_17195 PF00589 Phage integrase family LDO71_17200 PF10411 Disulfide bond isomerase protein N-terminus LDO71_17200 PF13098 Thioredoxin-like domain LDO71_17205 PF03447 Homoserine dehydrogenase, NAD binding domain LDO71_17205 PF00742 Homoserine dehydrogenase LDO71_17205 PF01842 ACT domain LDO71_17210 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_17215 PF00768 D-alanyl-D-alanine carboxypeptidase LDO71_17220 PF00196 Bacterial regulatory proteins, luxR family LDO71_17220 PF00072 Response regulator receiver domain LDO71_17240 PF02954 Bacterial regulatory protein, Fis family LDO71_17240 PF00072 Response regulator receiver domain LDO71_17240 PF00158 Sigma-54 interaction domain LDO71_17245 PF03572 Peptidase family S41 LDO71_17245 PF00595 PDZ domain LDO71_17250 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LDO71_17250 PF01676 Metalloenzyme superfamily LDO71_17255 PF03739 Lipopolysaccharide export system permease LptF/LptG LDO71_17265 PF00883 Cytosol aminopeptidase family, catalytic domain LDO71_17265 PF02789 Cytosol aminopeptidase family, N-terminal domain LDO71_17285 PF00677 Lumazine binding domain LDO71_17295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDO71_17295 PF01872 RibD C-terminal domain LDO71_17300 PF03477 ATP cone domain LDO71_17305 PF00909 Ammonium Transporter Family LDO71_17310 PF00543 Nitrogen regulatory protein P-II LDO71_17320 PF13335 Magnesium chelatase, subunit ChlI C-terminal LDO71_17320 PF01078 Magnesium chelatase, subunit ChlI LDO71_17335 PF00701 Dihydrodipicolinate synthetase family LDO71_17350 PF03573 outer membrane porin, OprD family LDO71_17355 PF00719 Inorganic pyrophosphatase LDO71_17370 PF13193 AMP-binding enzyme C-terminal domain LDO71_17370 PF00501 AMP-binding enzyme LDO71_17375 PF00521 DNA gyrase/topoisomerase IV, subunit A LDO71_17375 PF03989 DNA gyrase C-terminal domain, beta-propeller LDO71_17380 PF07690 Major Facilitator Superfamily LDO71_17385 PF03458 UPF0126 domain LDO71_17390 PF02810 SEC-C motif LDO71_17395 PF03471 Transporter associated domain LDO71_17395 PF03741 Integral membrane protein TerC family LDO71_17400 PF03641 Possible lysine decarboxylase LDO71_17405 PF07690 Major Facilitator Superfamily LDO71_17415 PF11798 IMS family HHH motif LDO71_17415 PF00817 impB/mucB/samB family LDO71_17415 PF11799 impB/mucB/samB family C-terminal domain LDO71_17435 PF11842 Domain of unknown function (DUF3362) LDO71_17435 PF04055 Radical SAM superfamily LDO71_17435 PF08497 Radical SAM N-terminal LDO71_17455 PF03358 NADPH-dependent FMN reductase LDO71_17465 PF00291 Pyridoxal-phosphate dependent enzyme LDO71_17525 PF01327 Polypeptide deformylase LDO71_17535 PF02481 DNA recombination-mediator protein A LDO71_17535 PF17782 DprA winged helix domain LDO71_17540 PF01300 Telomere recombination LDO71_17545 PF00892 EamA-like transporter family LDO71_17550 PF00440 Bacterial regulatory proteins, tetR family LDO71_17555 PF07690 Major Facilitator Superfamily LDO71_17565 PF00255 Glutathione peroxidase LDO71_17575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDO71_17580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDO71_17580 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDO71_17585 PF00231 ATP synthase LDO71_17590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDO71_17590 PF00306 ATP synthase alpha/beta chain, C terminal domain LDO71_17590 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDO71_17595 PF00213 ATP synthase delta (OSCP) subunit LDO71_17600 PF00430 ATP synthase B/B' CF(0) LDO71_17605 PF00137 ATP synthase subunit C LDO71_17610 PF00119 ATP synthase A chain LDO71_17630 PF00005 ABC transporter LDO71_17635 PF00950 ABC 3 transport family LDO71_17640 PF01810 LysE type translocator LDO71_17645 PF04261 Dyp-type peroxidase family LDO71_17650 PF00390 Malic enzyme, N-terminal domain LDO71_17650 PF03949 Malic enzyme, NAD binding domain LDO71_17655 PF03485 Arginyl tRNA synthetase N terminal domain LDO71_17655 PF05746 DALR anticodon binding domain LDO71_17655 PF00750 tRNA synthetases class I (R) LDO71_17675 PF02678 Pirin LDO71_17675 PF05726 Pirin C-terminal cupin domain LDO71_17690 PF03551 Transcriptional regulator PadR-like family LDO71_17695 PF13302 Acetyltransferase (GNAT) domain LDO71_17700 PF00117 Glutamine amidotransferase class-I LDO71_17700 PF00958 GMP synthase C terminal domain LDO71_17700 PF02540 NAD synthase LDO71_17705 PF04286 Protein of unknown function (DUF445) LDO71_17710 PF07681 DoxX LDO71_17715 PF09335 SNARE associated Golgi protein LDO71_17730 PF13614 AAA domain LDO71_17740 PF01722 BolA-like protein LDO71_17755 PF01648 4'-phosphopantetheinyl transferase superfamily LDO71_17760 PF16363 GDP-mannose 4,6 dehydratase LDO71_17775 PF00501 AMP-binding enzyme LDO71_17775 PF13193 AMP-binding enzyme C-terminal domain LDO71_17775 PF00668 Condensation domain LDO71_17775 PF00550 Phosphopantetheine attachment site LDO71_17775 PF00975 Thioesterase domain LDO71_17780 PF16197 Ketoacyl-synthetase C-terminal extension LDO71_17780 PF00550 Phosphopantetheine attachment site LDO71_17780 PF08242 Methyltransferase domain LDO71_17780 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_17780 PF00975 Thioesterase domain LDO71_17780 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_17780 PF14765 Polyketide synthase dehydratase LDO71_17785 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_17785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_17785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_17790 PF00501 AMP-binding enzyme LDO71_17795 PF03472 Autoinducer binding domain LDO71_17795 PF00196 Bacterial regulatory proteins, luxR family LDO71_17805 PF00765 Autoinducer synthase LDO71_17810 PF00083 Sugar (and other) transporter LDO71_17810 PF07690 Major Facilitator Superfamily LDO71_17815 PF00378 Enoyl-CoA hydratase/isomerase LDO71_17820 PF00378 Enoyl-CoA hydratase/isomerase LDO71_17825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO71_17825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO71_17825 PF02770 Acyl-CoA dehydrogenase, middle domain LDO71_17830 PF13193 AMP-binding enzyme C-terminal domain LDO71_17830 PF00501 AMP-binding enzyme LDO71_17835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDO71_17835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDO71_17840 PF00171 Aldehyde dehydrogenase family LDO71_17850 PF00324 Amino acid permease LDO71_17855 PF00324 Amino acid permease LDO71_17860 PF01042 Endoribonuclease L-PSP LDO71_17865 PF00842 Alanine racemase, C-terminal domain LDO71_17865 PF01168 Alanine racemase, N-terminal domain LDO71_17870 PF01266 FAD dependent oxidoreductase LDO71_17875 PF01037 Lrp/AsnC ligand binding domain LDO71_17885 PF07715 TonB-dependent Receptor Plug Domain LDO71_17885 PF00593 TonB dependent receptor LDO71_17900 PF00849 RNA pseudouridylate synthase LDO71_17925 PF04717 Type VI secretion system, phage-baseplate injector LDO71_17925 PF13296 Putative type VI secretion system Rhs element Vgr LDO71_17925 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDO71_17935 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO71_17935 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO71_17965 PF00694 Aconitase C-terminal domain LDO71_17965 PF00330 Aconitase family (aconitate hydratase) LDO71_17970 PF00285 Citrate synthase, C-terminal domain LDO71_17980 PF07729 FCD domain LDO71_17980 PF00392 Bacterial regulatory proteins, gntR family LDO71_17990 PF00155 Aminotransferase class I and II LDO71_17995 PF01565 FAD binding domain LDO71_17995 PF09330 D-lactate dehydrogenase, membrane binding LDO71_18000 PF01070 FMN-dependent dehydrogenase LDO71_18005 PF07729 FCD domain LDO71_18005 PF00392 Bacterial regulatory proteins, gntR family LDO71_18010 PF02652 L-lactate permease LDO71_18015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO71_18015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO71_18015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO71_18015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO71_18020 PF16363 GDP-mannose 4,6 dehydratase LDO71_18025 PF00342 Phosphoglucose isomerase LDO71_18030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDO71_18030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDO71_18030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDO71_18035 PF00483 Nucleotidyl transferase LDO71_18040 PF02397 Bacterial sugar transferase LDO71_18045 PF00953 Glycosyl transferase family 4 LDO71_18050 PF01370 NAD dependent epimerase/dehydratase family LDO71_18055 PF13579 Glycosyl transferase 4-like domain LDO71_18060 PF02350 UDP-N-acetylglucosamine 2-epimerase LDO71_18065 PF01370 NAD dependent epimerase/dehydratase family LDO71_18070 PF08485 Polysaccharide biosynthesis protein C-terminal LDO71_18070 PF02719 Polysaccharide biosynthesis protein LDO71_18085 PF07922 Glycosyltransferase family 52 LDO71_18090 PF01943 Polysaccharide biosynthesis protein LDO71_18095 PF02348 Cytidylyltransferase LDO71_18100 PF00483 Nucleotidyl transferase LDO71_18110 PF03102 NeuB family LDO71_18110 PF08666 SAF domain LDO71_18115 PF02350 UDP-N-acetylglucosamine 2-epimerase LDO71_18120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDO71_18125 PF02719 Polysaccharide biosynthesis protein LDO71_18130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDO71_18130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDO71_18130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDO71_18135 PF02563 Polysaccharide biosynthesis/export protein LDO71_18135 PF10531 SLBB domain LDO71_18135 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LDO71_18140 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDO71_18145 PF13614 AAA domain LDO71_18145 PF02706 Chain length determinant protein LDO71_18145 PF13807 G-rich domain on putative tyrosine kinase LDO71_18150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO71_18150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDO71_18155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO71_18155 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDO71_18160 PF03023 Lipid II flippase MurJ LDO71_18165 PF01510 N-acetylmuramoyl-L-alanine amidase LDO71_18170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LDO71_18170 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LDO71_18180 PF05506 Domain of unknown function (DUF756) LDO71_18180 PF04185 Phosphoesterase family LDO71_18190 PF01138 3' exoribonuclease family, domain 1 LDO71_18190 PF03725 3' exoribonuclease family, domain 2 LDO71_18195 PF00487 Fatty acid desaturase LDO71_18200 PF00175 Oxidoreductase NAD-binding domain LDO71_18205 PF00440 Bacterial regulatory proteins, tetR family LDO71_18210 PF00440 Bacterial regulatory proteins, tetR family LDO71_18210 PF08360 QacR-like protein, C-terminal region LDO71_18215 PF01323 DSBA-like thioredoxin domain LDO71_18225 PF13419 Haloacid dehalogenase-like hydrolase LDO71_18230 PF00106 short chain dehydrogenase LDO71_18245 PF00696 Amino acid kinase family LDO71_18245 PF00583 Acetyltransferase (GNAT) family LDO71_18250 PF09084 NMT1/THI5 like LDO71_18255 PF09084 NMT1/THI5 like LDO71_18260 PF00296 Luciferase-like monooxygenase LDO71_18265 PF00528 Binding-protein-dependent transport system inner membrane component LDO71_18270 PF00005 ABC transporter LDO71_18275 PF08362 YcdC-like protein, C-terminal region LDO71_18275 PF00440 Bacterial regulatory proteins, tetR family LDO71_18280 PF01048 Phosphorylase superfamily LDO71_18290 PF01687 Riboflavin kinase LDO71_18290 PF06574 FAD synthetase LDO71_18295 PF00133 tRNA synthetases class I (I, L, M and V) LDO71_18295 PF08264 Anticodon-binding domain of tRNA LDO71_18295 PF06827 Zinc finger found in FPG and IleRS LDO71_18300 PF01252 Signal peptidase (SPase) II LDO71_18305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO71_18345 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDO71_18350 PF07859 alpha/beta hydrolase fold LDO71_18370 PF03466 LysR substrate binding domain LDO71_18370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_18375 PF01025 GrpE LDO71_18380 PF00012 Hsp70 protein LDO71_18400 PF13406 Transglycosylase SLT domain LDO71_18405 PF02222 ATP-grasp domain LDO71_18405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDO71_18410 PF00731 AIR carboxylase LDO71_18420 PF01225 Mur ligase family, catalytic domain LDO71_18420 PF02875 Mur ligase family, glutamate ligase domain LDO71_18420 PF08245 Mur ligase middle domain LDO71_18430 PF01569 PAP2 superfamily LDO71_18435 PF03741 Integral membrane protein TerC family LDO71_18445 PF03738 Glutathionylspermidine synthase preATP-grasp LDO71_18450 PF00355 Rieske [2Fe-2S] domain LDO71_18455 PF01979 Amidohydrolase family LDO71_18460 PF00156 Phosphoribosyl transferase domain LDO71_18470 PF10411 Disulfide bond isomerase protein N-terminus LDO71_18470 PF13098 Thioredoxin-like domain LDO71_18475 PF16916 Dimerisation domain of Zinc Transporter LDO71_18475 PF01545 Cation efflux family LDO71_18480 PF02583 Metal-sensitive transcriptional repressor LDO71_18485 PF01926 50S ribosome-binding GTPase LDO71_18485 PF12631 MnmE helical domain LDO71_18485 PF10396 GTP-binding protein TrmE N-terminus LDO71_18490 PF02096 60Kd inner membrane protein LDO71_18490 PF14849 YidC periplasmic domain LDO71_18495 PF01809 Putative membrane protein insertion efficiency factor LDO71_18500 PF00825 Ribonuclease P LDO71_18505 PF00468 Ribosomal protein L34 LDO71_18515 PF00905 Penicillin binding protein transpeptidase domain LDO71_18530 PF00072 Response regulator receiver domain LDO71_18530 PF00486 Transcriptional regulatory protein, C terminal LDO71_18535 PF00512 His Kinase A (phospho-acceptor) domain LDO71_18535 PF00989 PAS fold LDO71_18535 PF18698 Histidine kinase sensor domain LDO71_18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO71_18535 PF00672 HAMP domain LDO71_18540 PF07690 Major Facilitator Superfamily LDO71_18545 PF00873 AcrB/AcrD/AcrF family LDO71_18550 PF00529 HlyD membrane-fusion protein of T1SS LDO71_18550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO71_18570 PF01381 Helix-turn-helix LDO71_18575 PF05973 Phage derived protein Gp49-like (DUF891) LDO71_18590 PF01740 STAS domain LDO71_18590 PF00916 Sulfate permease family LDO71_18600 PF00239 Resolvase, N terminal domain LDO71_18600 PF02796 Helix-turn-helix domain of resolvase LDO71_18615 PF07690 Major Facilitator Superfamily LDO71_18630 PF00679 Elongation factor G C-terminus LDO71_18630 PF00009 Elongation factor Tu GTP binding domain LDO71_18630 PF14492 Elongation Factor G, domain II LDO71_18630 PF03764 Elongation factor G, domain IV LDO71_18660 PF13005 zinc-finger binding domain of transposase IS66 LDO71_18660 PF13007 Transposase C of IS166 homeodomain LDO71_18660 PF13817 IS66 C-terminal element LDO71_18660 PF03050 Transposase IS66 family LDO71_18680 PF13610 DDE domain LDO71_18685 PF02522 Aminoglycoside 3-N-acetyltransferase LDO71_18690 PF01636 Phosphotransferase enzyme family LDO71_18700 PF13610 DDE domain LDO71_18715 PF02332 Methane/Phenol/Toluene Hydroxylase LDO71_18725 PF00809 Pterin binding enzyme LDO71_18745 PF12697 Alpha/beta hydrolase family LDO71_18750 PF01494 FAD binding domain LDO71_18785 PF00186 Dihydrofolate reductase LDO71_18790 PF00583 Acetyltransferase (GNAT) family LDO71_18820 PF18623 TnsE C-terminal domain LDO71_18830 PF13401 AAA domain LDO71_18830 PF11426 Tn7 transposition regulator TnsC LDO71_18835 PF00665 Integrase core domain LDO71_18840 PF08722 TnsA endonuclease N terminal LDO71_18840 PF08721 TnsA endonuclease C terminal LDO71_18850 PF03466 LysR substrate binding domain LDO71_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO71_18860 PF00106 short chain dehydrogenase LDO71_18870 PF12848 ABC transporter LDO71_18870 PF00005 ABC transporter LDO71_18885 PF13610 DDE domain LDO71_18905 PF13005 zinc-finger binding domain of transposase IS66 LDO71_18905 PF13007 Transposase C of IS166 homeodomain LDO71_18905 PF13817 IS66 C-terminal element LDO71_18905 PF03050 Transposase IS66 family LDO71_18940 PF00589 Phage integrase family LDO71_18940 PF13356 Arm DNA-binding domain LDO71_18970 PF13332 Hemagglutinin repeat LDO71_18970 PF05860 haemagglutination activity domain LDO71_18970 PF04829 Pre-toxin domain with VENN motif LDO71_18970 PF13018 Extended Signal Peptide of Type V secretion system LDO71_18975 PF08479 POTRA domain, ShlB-type LDO71_18975 PF17287 POTRA domain LDO71_18975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDO71_18990 PF13173 AAA domain LDO71_18990 PF13635 Domain of unknown function (DUF4143) LDO71_19050 PF02810 SEC-C motif LDO71_19075 PF00873 AcrB/AcrD/AcrF family LDO71_19115 PF13614 AAA domain LDO71_19120 PF02195 ParB-like nuclease domain LDO71_19120 PF17762 HTH domain found in ParB protein LDO71_19130 PF02384 N-6 DNA Methylase LDO71_19150 PF18766 SWI2/SNF2 ATPase LDO71_19150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDO71_19150 PF11867 Domain of unknown function (DUF3387) LDO71_19180 PF00717 Peptidase S24-like LDO71_19185 PF11798 IMS family HHH motif LDO71_19185 PF13438 Domain of unknown function (DUF4113) LDO71_19185 PF00817 impB/mucB/samB family LDO71_19185 PF11799 impB/mucB/samB family C-terminal domain LDO71_19195 PF02601 Exonuclease VII, large subunit LDO71_19195 PF13742 OB-fold nucleic acid binding domain LDO71_19240 PF00239 Resolvase, N terminal domain LDO71_19240 PF02796 Helix-turn-helix domain of resolvase LDO71_19250 PF01636 Phosphotransferase enzyme family LDO71_19255 PF00005 ABC transporter LDO71_19255 PF12848 ABC transporter LDO71_19260 PF00398 Ribosomal RNA adenine dimethylase LDO71_19295 PF03389 MobA/MobL family LDO71_19305 PF01381 Helix-turn-helix LDO71_19310 PF05973 Phage derived protein Gp49-like (DUF891) LDO71_19315 PF00440 Bacterial regulatory proteins, tetR family LDO71_19315 PF02909 Tetracyclin repressor-like, C-terminal domain LDO71_19320 PF07690 Major Facilitator Superfamily