locus-tag class description ABTJ_00001 PF00308 Bacterial dnaA protein ABTJ_00001 PF08299 Bacterial dnaA protein helix-turn-helix ABTJ_00001 PF11638 DnaA N-terminal domain ABTJ_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABTJ_00002 PF02767 DNA polymerase III beta subunit, central domain ABTJ_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABTJ_00003 PF02463 RecF/RecN/SMC N terminal domain ABTJ_00004 PF00204 DNA gyrase B ABTJ_00004 PF18053 DNA gyrase B subunit insert domain ABTJ_00004 PF01751 Toprim domain ABTJ_00004 PF00986 DNA gyrase B subunit, carboxyl terminus ABTJ_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00006 PF09335 SNARE associated Golgi protein ABTJ_00007 PF00005 ABC transporter ABTJ_00007 PF12848 ABC transporter ABTJ_00011 PF01521 Iron-sulphur cluster biosynthesis ABTJ_00012 PF00561 alpha/beta hydrolase fold ABTJ_00013 PF03702 Anhydro-N-acetylmuramic acid kinase ABTJ_00014 PF00579 tRNA synthetases class I (W and Y) ABTJ_00023 PF00209 Sodium:neurotransmitter symporter family ABTJ_00025 PF01189 16S rRNA methyltransferase RsmB/F ABTJ_00025 PF01029 NusB family ABTJ_00026 PF00551 Formyl transferase ABTJ_00026 PF02911 Formyl transferase, C-terminal domain ABTJ_00027 PF00920 Dehydratase family ABTJ_00030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00030 PF03466 LysR substrate binding domain ABTJ_00031 PF00860 Permease family ABTJ_00032 PF00311 Phosphoenolpyruvate carboxylase ABTJ_00033 PF00440 Bacterial regulatory proteins, tetR family ABTJ_00033 PF08361 MAATS-type transcriptional repressor, C-terminal region ABTJ_00034 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_00035 PF00873 AcrB/AcrD/AcrF family ABTJ_00037 PF00226 DnaJ domain ABTJ_00037 PF01556 DnaJ C terminal domain ABTJ_00037 PF00684 DnaJ central domain ABTJ_00039 PF01113 Dihydrodipicolinate reductase, N-terminus ABTJ_00039 PF05173 Dihydrodipicolinate reductase, C-terminus ABTJ_00041 PF07690 Major Facilitator Superfamily ABTJ_00042 PF00248 Aldo/keto reductase family ABTJ_00043 PF03466 LysR substrate binding domain ABTJ_00043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00045 PF00392 Bacterial regulatory proteins, gntR family ABTJ_00045 PF00155 Aminotransferase class I and II ABTJ_00046 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_00046 PF00107 Zinc-binding dehydrogenase ABTJ_00047 PF03352 Methyladenine glycosylase ABTJ_00050 PF10576 Iron-sulfur binding domain of endonuclease III ABTJ_00050 PF00730 HhH-GPD superfamily base excision DNA repair protein ABTJ_00050 PF14815 NUDIX domain ABTJ_00050 PF00633 Helix-hairpin-helix motif ABTJ_00053 PF07043 Protein of unknown function (DUF1328) ABTJ_00054 PF03692 Putative zinc- or iron-chelating domain ABTJ_00055 PF07995 Glucose / Sorbosone dehydrogenase ABTJ_00056 PF16193 AAA C-terminal domain ABTJ_00056 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_00056 PF12002 MgsA AAA+ ATPase C terminal ABTJ_00057 PF01226 Formate/nitrite transporter ABTJ_00059 PF01259 SAICAR synthetase ABTJ_00061 PF00701 Dihydrodipicolinate synthetase family ABTJ_00062 PF00857 Isochorismatase family ABTJ_00063 PF01758 Sodium Bile acid symporter family ABTJ_00064 PF01554 MatE ABTJ_00065 PF04463 Protein of unknown function (DUF523) ABTJ_00066 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABTJ_00068 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABTJ_00069 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_00069 PF14497 Glutathione S-transferase, C-terminal domain ABTJ_00071 PF00324 Amino acid permease ABTJ_00073 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABTJ_00073 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABTJ_00075 PF07702 UTRA domain ABTJ_00075 PF00392 Bacterial regulatory proteins, gntR family ABTJ_00076 PF05962 HutD ABTJ_00077 PF17391 Urocanase N-terminal domain ABTJ_00077 PF17392 Urocanase C-terminal domain ABTJ_00077 PF01175 Urocanase Rossmann-like domain ABTJ_00078 PF00221 Aromatic amino acid lyase ABTJ_00079 PF00324 Amino acid permease ABTJ_00080 PF01979 Amidohydrolase family ABTJ_00081 PF00491 Arginase family ABTJ_00084 PF01177 Asp/Glu/Hydantoin racemase ABTJ_00085 PF01380 SIS domain ABTJ_00086 PF14602 Hexapeptide repeat of succinyl-transferase ABTJ_00086 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_00086 PF12804 MobA-like NTP transferase domain ABTJ_00087 PF04608 Phosphatidylglycerophosphatase A ABTJ_00088 PF00586 AIR synthase related protein, N-terminal domain ABTJ_00088 PF02769 AIR synthase related protein, C-terminal domain ABTJ_00089 PF01029 NusB family ABTJ_00090 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABTJ_00091 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABTJ_00091 PF00925 GTP cyclohydrolase II ABTJ_00096 PF02580 D-Tyr-tRNA(Tyr) deacylase ABTJ_00097 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABTJ_00097 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABTJ_00098 PF00581 Rhodanese-like domain ABTJ_00099 PF02666 Phosphatidylserine decarboxylase ABTJ_00100 PF03069 Acetamidase/Formamidase family ABTJ_00104 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_00104 PF11808 Phosphate regulon sensor protein PhoR ABTJ_00104 PF00989 PAS fold ABTJ_00104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00105 PF00486 Transcriptional regulatory protein, C terminal ABTJ_00105 PF00072 Response regulator receiver domain ABTJ_00107 PF00106 short chain dehydrogenase ABTJ_00108 PF01554 MatE ABTJ_00109 PF00155 Aminotransferase class I and II ABTJ_00110 PF04286 Protein of unknown function (DUF445) ABTJ_00113 PF04262 Glutamate-cysteine ligase ABTJ_00114 PF02600 Disulfide bond formation protein DsbB ABTJ_00115 PF04717 Type VI secretion system, phage-baseplate injector ABTJ_00116 PF00877 NlpC/P60 family ABTJ_00116 PF01476 LysM domain ABTJ_00120 PF05728 Uncharacterised protein family (UPF0227) ABTJ_00121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00121 PF00986 DNA gyrase B subunit, carboxyl terminus ABTJ_00121 PF00204 DNA gyrase B ABTJ_00121 PF01751 Toprim domain ABTJ_00122 PF00106 short chain dehydrogenase ABTJ_00123 PF04115 Ureidoglycolate lyase ABTJ_00124 PF03561 Allantoicase repeat ABTJ_00125 PF01494 FAD binding domain ABTJ_00127 PF00860 Permease family ABTJ_00128 PF00576 HIUase/Transthyretin family ABTJ_00134 PF02683 Cytochrome C biogenesis protein transmembrane region ABTJ_00134 PF11412 Disulphide bond corrector protein DsbC ABTJ_00135 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_00135 PF07694 5TMR of 5TMR-LYT ABTJ_00136 PF07859 alpha/beta hydrolase fold ABTJ_00138 PF03960 ArsC family ABTJ_00139 PF03372 Endonuclease/Exonuclease/phosphatase family ABTJ_00140 PF00156 Phosphoribosyl transferase domain ABTJ_00141 PF00593 TonB dependent receptor ABTJ_00141 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00143 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABTJ_00143 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABTJ_00144 PF03033 Glycosyltransferase family 28 N-terminal domain ABTJ_00144 PF04101 Glycosyltransferase family 28 C-terminal domain ABTJ_00145 PF01225 Mur ligase family, catalytic domain ABTJ_00145 PF08245 Mur ligase middle domain ABTJ_00145 PF02875 Mur ligase family, glutamate ligase domain ABTJ_00146 PF07478 D-ala D-ala ligase C-terminus ABTJ_00146 PF01820 D-ala D-ala ligase N-terminus ABTJ_00147 PF08478 POTRA domain, FtsQ-type ABTJ_00147 PF03799 Cell division protein FtsQ ABTJ_00148 PF02491 SHS2 domain inserted in FTSA ABTJ_00149 PF12327 FtsZ family, C-terminal domain ABTJ_00149 PF00091 Tubulin/FtsZ family, GTPase domain ABTJ_00150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABTJ_00152 PF01551 Peptidase family M23 ABTJ_00153 PF17831 Pyruvate dehydrogenase E1 component middle domain ABTJ_00153 PF00456 Transketolase, thiamine diphosphate binding domain ABTJ_00154 PF00364 Biotin-requiring enzyme ABTJ_00154 PF02817 e3 binding domain ABTJ_00154 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABTJ_00156 PF01169 Uncharacterized protein family UPF0016 ABTJ_00157 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00157 PF00593 TonB dependent receptor ABTJ_00160 PF00593 TonB dependent receptor ABTJ_00160 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00161 PF01613 Flavin reductase like domain ABTJ_00161 PF00258 Flavodoxin ABTJ_00162 PF03692 Putative zinc- or iron-chelating domain ABTJ_00163 PF00571 CBS domain ABTJ_00163 PF00478 IMP dehydrogenase / GMP reductase domain ABTJ_00164 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABTJ_00164 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABTJ_00164 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABTJ_00164 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABTJ_00165 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABTJ_00165 PF01243 Pyridoxamine 5'-phosphate oxidase ABTJ_00166 PF01368 DHH family ABTJ_00166 PF02272 DHHA1 domain ABTJ_00166 PF17768 RecJ OB domain ABTJ_00168 PF00472 RF-1 domain ABTJ_00168 PF03462 PCRF domain ABTJ_00171 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_00172 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABTJ_00173 PF04452 RNA methyltransferase ABTJ_00174 PF00924 Mechanosensitive ion channel ABTJ_00176 PF13193 AMP-binding enzyme C-terminal domain ABTJ_00176 PF16177 Acetyl-coenzyme A synthetase N-terminus ABTJ_00176 PF00501 AMP-binding enzyme ABTJ_00177 PF00857 Isochorismatase family ABTJ_00178 PF01037 Lrp/AsnC ligand binding domain ABTJ_00179 PF00872 Transposase, Mutator family ABTJ_00180 PF00296 Luciferase-like monooxygenase ABTJ_00181 PF03358 NADPH-dependent FMN reductase ABTJ_00182 PF00072 Response regulator receiver domain ABTJ_00182 PF00196 Bacterial regulatory proteins, luxR family ABTJ_00184 PF00672 HAMP domain ABTJ_00184 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_00184 PF01627 Hpt domain ABTJ_00184 PF00072 Response regulator receiver domain ABTJ_00184 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00185 PF04341 Protein of unknown function, DUF485 ABTJ_00186 PF00474 Sodium:solute symporter family ABTJ_00188 PF02028 BCCT, betaine/carnitine/choline family transporter ABTJ_00190 PF17158 Membrane-associated sensor, integral membrane domain ABTJ_00190 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_00192 PF00005 ABC transporter ABTJ_00192 PF17755 UvrA DNA-binding domain ABTJ_00192 PF17760 UvrA interaction domain ABTJ_00193 PF16925 Tetracyclin repressor-like, C-terminal domain ABTJ_00193 PF00440 Bacterial regulatory proteins, tetR family ABTJ_00194 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_00194 PF00107 Zinc-binding dehydrogenase ABTJ_00196 PF06942 GlpM protein ABTJ_00197 PF08543 Phosphomethylpyrimidine kinase ABTJ_00197 PF02581 Thiamine monophosphate synthase ABTJ_00197 PF03070 TENA/THI-4/PQQC family ABTJ_00199 PF07690 Major Facilitator Superfamily ABTJ_00200 PF00436 Single-strand binding protein family ABTJ_00202 PF03591 AzlC protein ABTJ_00204 PF00324 Amino acid permease ABTJ_00205 PF00392 Bacterial regulatory proteins, gntR family ABTJ_00205 PF00155 Aminotransferase class I and II ABTJ_00206 PF00202 Aminotransferase class-III ABTJ_00207 PF00171 Aldehyde dehydrogenase family ABTJ_00208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00209 PF00857 Isochorismatase family ABTJ_00210 PF05726 Pirin C-terminal cupin domain ABTJ_00210 PF02678 Pirin ABTJ_00211 PF01593 Flavin containing amine oxidoreductase ABTJ_00216 PF07690 Major Facilitator Superfamily ABTJ_00217 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00217 PF03466 LysR substrate binding domain ABTJ_00221 PF00248 Aldo/keto reductase family ABTJ_00222 PF12833 Helix-turn-helix domain ABTJ_00222 PF02311 AraC-like ligand binding domain ABTJ_00227 PF01638 HxlR-like helix-turn-helix ABTJ_00228 PF02525 Flavodoxin-like fold ABTJ_00241 PF00230 Major intrinsic protein ABTJ_00244 PF00977 Histidine biosynthesis protein ABTJ_00245 PF01636 Phosphotransferase enzyme family ABTJ_00248 PF03992 Antibiotic biosynthesis monooxygenase ABTJ_00251 PF00977 Histidine biosynthesis protein ABTJ_00254 PF00117 Glutamine amidotransferase class-I ABTJ_00255 PF00475 Imidazoleglycerol-phosphate dehydratase ABTJ_00259 PF00583 Acetyltransferase (GNAT) family ABTJ_00260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABTJ_00260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABTJ_00261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00261 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_00261 PF00672 HAMP domain ABTJ_00262 PF00486 Transcriptional regulatory protein, C terminal ABTJ_00262 PF00072 Response regulator receiver domain ABTJ_00263 PF17674 HHH domain ABTJ_00263 PF09371 Tex-like protein N-terminal domain ABTJ_00263 PF00575 S1 RNA binding domain ABTJ_00263 PF16921 Tex protein YqgF-like domain ABTJ_00264 PF01740 STAS domain ABTJ_00264 PF00916 Sulfate permease family ABTJ_00265 PF00106 short chain dehydrogenase ABTJ_00266 PF01053 Cys/Met metabolism PLP-dependent enzyme ABTJ_00267 PF00005 ABC transporter ABTJ_00267 PF12848 ABC transporter ABTJ_00272 PF04191 Phospholipid methyltransferase ABTJ_00275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_00275 PF00529 HlyD membrane-fusion protein of T1SS ABTJ_00276 PF00873 AcrB/AcrD/AcrF family ABTJ_00277 PF01545 Cation efflux family ABTJ_00283 PF00324 Amino acid permease ABTJ_00286 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABTJ_00289 PF01795 MraW methylase family ABTJ_00291 PF00905 Penicillin binding protein transpeptidase domain ABTJ_00291 PF03717 Penicillin-binding Protein dimerisation domain ABTJ_00292 PF01225 Mur ligase family, catalytic domain ABTJ_00292 PF02875 Mur ligase family, glutamate ligase domain ABTJ_00292 PF08245 Mur ligase middle domain ABTJ_00293 PF01225 Mur ligase family, catalytic domain ABTJ_00293 PF08245 Mur ligase middle domain ABTJ_00293 PF02875 Mur ligase family, glutamate ligase domain ABTJ_00294 PF00953 Glycosyl transferase family 4 ABTJ_00296 PF13847 Methyltransferase domain ABTJ_00297 PF00905 Penicillin binding protein transpeptidase domain ABTJ_00297 PF17092 Penicillin-binding protein OB-like domain ABTJ_00297 PF00912 Transglycosylase ABTJ_00302 PF11741 AMIN domain ABTJ_00302 PF07660 Secretin and TonB N terminus short domain ABTJ_00302 PF03958 Bacterial type II/III secretion system short domain ABTJ_00302 PF00263 Bacterial type II and III secretion system protein ABTJ_00303 PF01202 Shikimate kinase ABTJ_00304 PF01761 3-dehydroquinate synthase ABTJ_00306 PF01493 GXGXG motif ABTJ_00306 PF00310 Glutamine amidotransferases class-II ABTJ_00306 PF04898 Glutamate synthase central domain ABTJ_00306 PF01645 Conserved region in glutamate synthase ABTJ_00307 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_00307 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABTJ_00309 PF04011 LemA family ABTJ_00310 PF04536 TPM domain ABTJ_00312 PF07963 Prokaryotic N-terminal methylation motif ABTJ_00312 PF00114 Pilin (bacterial filament) ABTJ_00314 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABTJ_00314 PF04932 O-Antigen ligase ABTJ_00314 PF15864 Protein glycosylation ligase ABTJ_00315 PF00210 Ferritin-like domain ABTJ_00316 PF04324 BFD-like [2Fe-2S] binding domain ABTJ_00317 PF01042 Endoribonuclease L-PSP ABTJ_00318 PF02824 TGS domain ABTJ_00318 PF04607 Region found in RelA / SpoT proteins ABTJ_00318 PF13291 ACT domain ABTJ_00319 PF01192 RNA polymerase Rpb6 ABTJ_00320 PF00625 Guanylate kinase ABTJ_00321 PF02401 LytB protein ABTJ_00329 PF00886 Ribosomal protein S16 ABTJ_00330 PF05239 PRC-barrel domain ABTJ_00330 PF01782 RimM N-terminal domain ABTJ_00331 PF01746 tRNA (Guanine-1)-methyltransferase ABTJ_00332 PF01245 Ribosomal protein L19 ABTJ_00333 PF00561 alpha/beta hydrolase fold ABTJ_00334 PF03280 Proteobacterial lipase chaperone protein ABTJ_00335 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABTJ_00335 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABTJ_00335 PF09157 Pseudouridine synthase II TruB, C-terminal ABTJ_00336 PF01925 Sulfite exporter TauE/SafE ABTJ_00338 PF00892 EamA-like transporter family ABTJ_00339 PF00892 EamA-like transporter family ABTJ_00340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABTJ_00340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABTJ_00341 PF01565 FAD binding domain ABTJ_00341 PF02913 FAD linked oxidases, C-terminal domain ABTJ_00343 PF03992 Antibiotic biosynthesis monooxygenase ABTJ_00344 PF02525 Flavodoxin-like fold ABTJ_00346 PF07690 Major Facilitator Superfamily ABTJ_00347 PF12805 FUSC-like inner membrane protein yccS ABTJ_00348 PF00080 Copper/zinc superoxide dismutase (SODC) ABTJ_00349 PF01594 AI-2E family transporter ABTJ_00356 PF00324 Amino acid permease ABTJ_00357 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABTJ_00357 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABTJ_00358 PF00202 Aminotransferase class-III ABTJ_00359 PF04958 Arginine N-succinyltransferase beta subunit ABTJ_00360 PF00171 Aldehyde dehydrogenase family ABTJ_00361 PF04996 Succinylarginine dihydrolase ABTJ_00362 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABTJ_00368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00368 PF03466 LysR substrate binding domain ABTJ_00369 PF00892 EamA-like transporter family ABTJ_00371 PF02092 Glycyl-tRNA synthetase beta subunit ABTJ_00371 PF05746 DALR anticodon binding domain ABTJ_00372 PF02091 Glycyl-tRNA synthetase alpha subunit ABTJ_00377 PF00571 CBS domain ABTJ_00378 PF04024 PspC domain ABTJ_00380 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABTJ_00380 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_00380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_00380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_00382 PF08501 Shikimate dehydrogenase substrate binding domain ABTJ_00382 PF01488 Shikimate / quinate 5-dehydrogenase ABTJ_00382 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABTJ_00383 PF01218 Coproporphyrinogen III oxidase ABTJ_00384 PF00925 GTP cyclohydrolase II ABTJ_00385 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABTJ_00385 PF02780 Transketolase, C-terminal domain ABTJ_00385 PF02779 Transketolase, pyrimidine binding domain ABTJ_00386 PF00459 Inositol monophosphatase family ABTJ_00387 PF00271 Helicase conserved C-terminal domain ABTJ_00387 PF12343 Cold shock protein DEAD box A ABTJ_00387 PF00270 DEAD/DEAH box helicase ABTJ_00387 PF03880 DbpA RNA binding domain ABTJ_00388 PF00005 ABC transporter ABTJ_00389 PF02405 Permease MlaE ABTJ_00391 PF05494 MlaC protein ABTJ_00393 PF01544 CorA-like Mg2+ transporter protein ABTJ_00394 PF03641 Possible lysine decarboxylase ABTJ_00395 PF00293 NUDIX domain ABTJ_00396 PF00156 Phosphoribosyl transferase domain ABTJ_00397 PF17191 RecG wedge domain ABTJ_00397 PF00271 Helicase conserved C-terminal domain ABTJ_00397 PF00270 DEAD/DEAH box helicase ABTJ_00400 PF01553 Acyltransferase ABTJ_00402 PF00375 Sodium:dicarboxylate symporter family ABTJ_00404 PF01926 50S ribosome-binding GTPase ABTJ_00405 PF02082 Transcriptional regulator ABTJ_00406 PF00970 Oxidoreductase FAD-binding domain ABTJ_00406 PF00175 Oxidoreductase NAD-binding domain ABTJ_00406 PF00042 Globin ABTJ_00407 PF05872 Bacterial protein of unknown function (DUF853) ABTJ_00408 PF01053 Cys/Met metabolism PLP-dependent enzyme ABTJ_00409 PF00117 Glutamine amidotransferase class-I ABTJ_00410 PF00338 Ribosomal protein S10p/S20e ABTJ_00411 PF00297 Ribosomal protein L3 ABTJ_00412 PF00573 Ribosomal protein L4/L1 family ABTJ_00413 PF00276 Ribosomal protein L23 ABTJ_00414 PF00181 Ribosomal Proteins L2, RNA binding domain ABTJ_00414 PF03947 Ribosomal Proteins L2, C-terminal domain ABTJ_00415 PF00203 Ribosomal protein S19 ABTJ_00416 PF00237 Ribosomal protein L22p/L17e ABTJ_00417 PF00189 Ribosomal protein S3, C-terminal domain ABTJ_00417 PF07650 KH domain ABTJ_00418 PF00252 Ribosomal protein L16p/L10e ABTJ_00419 PF00831 Ribosomal L29 protein ABTJ_00420 PF00366 Ribosomal protein S17 ABTJ_00421 PF00238 Ribosomal protein L14p/L23e ABTJ_00422 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABTJ_00422 PF00467 KOW motif ABTJ_00423 PF00673 ribosomal L5P family C-terminus ABTJ_00423 PF00281 Ribosomal protein L5 ABTJ_00424 PF00253 Ribosomal protein S14p/S29e ABTJ_00425 PF00410 Ribosomal protein S8 ABTJ_00426 PF00347 Ribosomal protein L6 ABTJ_00427 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABTJ_00428 PF00333 Ribosomal protein S5, N-terminal domain ABTJ_00428 PF03719 Ribosomal protein S5, C-terminal domain ABTJ_00429 PF00327 Ribosomal protein L30p/L7e ABTJ_00430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABTJ_00431 PF00344 SecY translocase ABTJ_00432 PF00444 Ribosomal protein L36 ABTJ_00433 PF00416 Ribosomal protein S13/S18 ABTJ_00434 PF00411 Ribosomal protein S11 ABTJ_00435 PF00163 Ribosomal protein S4/S9 N-terminal domain ABTJ_00435 PF01479 S4 domain ABTJ_00436 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABTJ_00436 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABTJ_00436 PF01000 RNA polymerase Rpb3/RpoA insert domain ABTJ_00437 PF01196 Ribosomal protein L17 ABTJ_00438 PF00743 Flavin-binding monooxygenase-like ABTJ_00439 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_00439 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_00439 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_00440 PF03937 Flavinator of succinate dehydrogenase ABTJ_00447 PF09526 Probable metal-binding protein (DUF2387) ABTJ_00448 PF01432 Peptidase family M3 ABTJ_00449 PF08461 Ribonuclease R winged-helix domain ABTJ_00449 PF08206 Ribonuclease B OB domain ABTJ_00449 PF17876 Cold shock domain ABTJ_00449 PF00575 S1 RNA binding domain ABTJ_00449 PF00773 RNB domain ABTJ_00458 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABTJ_00459 PF12833 Helix-turn-helix domain ABTJ_00460 PF00892 EamA-like transporter family ABTJ_00461 PF03631 Virulence factor BrkB ABTJ_00462 PF03358 NADPH-dependent FMN reductase ABTJ_00467 PF02130 Uncharacterized protein family UPF0054 ABTJ_00468 PF02562 PhoH-like protein ABTJ_00469 PF01938 TRAM domain ABTJ_00469 PF00919 Uncharacterized protein family UPF0004 ABTJ_00469 PF04055 Radical SAM superfamily ABTJ_00470 PF10145 Phage-related minor tail protein ABTJ_00470 PF01551 Peptidase family M23 ABTJ_00470 PF01464 Transglycosylase SLT domain ABTJ_00472 PF00056 lactate/malate dehydrogenase, NAD binding domain ABTJ_00472 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABTJ_00476 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABTJ_00477 PF01066 CDP-alcohol phosphatidyltransferase ABTJ_00487 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_00487 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_00487 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_00488 PF00440 Bacterial regulatory proteins, tetR family ABTJ_00488 PF17932 Tetracyclin repressor-like, C-terminal domain ABTJ_00491 PF01039 Carboxyl transferase domain ABTJ_00492 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_00492 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_00492 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_00494 PF00289 Biotin carboxylase, N-terminal domain ABTJ_00494 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABTJ_00494 PF00364 Biotin-requiring enzyme ABTJ_00494 PF02785 Biotin carboxylase C-terminal domain ABTJ_00496 PF04386 Stringent starvation protein B ABTJ_00497 PF13417 Glutathione S-transferase, N-terminal domain ABTJ_00497 PF00043 Glutathione S-transferase, C-terminal domain ABTJ_00498 PF00380 Ribosomal protein S9/S16 ABTJ_00499 PF00572 Ribosomal protein L13 ABTJ_00500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABTJ_00501 PF00398 Ribosomal RNA adenine dimethylase ABTJ_00502 PF00149 Calcineurin-like phosphoesterase ABTJ_00506 PF13167 GTP-binding GTPase N-terminal ABTJ_00506 PF16360 GTP-binding GTPase Middle Region ABTJ_00506 PF01926 50S ribosome-binding GTPase ABTJ_00508 PF13091 PLD-like domain ABTJ_00509 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABTJ_00509 PF00149 Calcineurin-like phosphoesterase ABTJ_00510 PF01389 OmpA-like transmembrane domain ABTJ_00510 PF00691 OmpA family ABTJ_00511 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_00511 PF17152 Periplasmic sensor domain ABTJ_00519 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABTJ_00519 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_00521 PF00753 Metallo-beta-lactamase superfamily ABTJ_00521 PF04273 Putative phosphatase (DUF442) ABTJ_00522 PF00561 alpha/beta hydrolase fold ABTJ_00523 PF00085 Thioredoxin ABTJ_00524 PF03061 Thioesterase superfamily ABTJ_00526 PF04461 Protein of unknown function (DUF520) ABTJ_00528 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABTJ_00528 PF01266 FAD dependent oxidoreductase ABTJ_00530 PF03795 YCII-related domain ABTJ_00531 PF04279 Intracellular septation protein A ABTJ_00532 PF02811 PHP domain ABTJ_00533 PF01062 Bestrophin, RFP-TM, chloride channel ABTJ_00534 PF04002 RadC-like JAB domain ABTJ_00535 PF04127 DNA / pantothenate metabolism flavoprotein ABTJ_00535 PF02441 Flavoprotein ABTJ_00536 PF02355 Protein export membrane protein ABTJ_00536 PF07549 SecD/SecF GG Motif ABTJ_00537 PF13721 SecD export protein N-terminal TM region ABTJ_00537 PF02355 Protein export membrane protein ABTJ_00537 PF07549 SecD/SecF GG Motif ABTJ_00538 PF02699 Preprotein translocase subunit ABTJ_00539 PF01702 Queuine tRNA-ribosyltransferase ABTJ_00542 PF02547 Queuosine biosynthesis protein ABTJ_00548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00548 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_00548 PF07689 KaiB domain ABTJ_00549 PF08335 GlnD PII-uridylyltransferase ABTJ_00549 PF03710 Glutamate-ammonia ligase adenylyltransferase ABTJ_00550 PF01063 Amino-transferase class IV ABTJ_00553 PF01522 Polysaccharide deacetylase ABTJ_00554 PF00535 Glycosyl transferase family 2 ABTJ_00555 PF13439 Glycosyltransferase Family 4 ABTJ_00555 PF00534 Glycosyl transferases group 1 ABTJ_00560 PF11380 Stealth protein CR2, conserved region 2 ABTJ_00560 PF17102 Stealth protein CR3, conserved region 3 ABTJ_00560 PF17101 Stealth protein CR1, conserved region 1 ABTJ_00561 PF02938 GAD domain ABTJ_00561 PF00152 tRNA synthetases class II (D, K and N) ABTJ_00561 PF01336 OB-fold nucleic acid binding domain ABTJ_00563 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00563 PF00593 TonB dependent receptor ABTJ_00567 PF06146 Phosphate-starvation-inducible E ABTJ_00568 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_00568 PF00043 Glutathione S-transferase, C-terminal domain ABTJ_00569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00569 PF03466 LysR substrate binding domain ABTJ_00570 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_00570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_00570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_00570 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABTJ_00571 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_00571 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_00571 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABTJ_00571 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_00573 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_00573 PF00672 HAMP domain ABTJ_00573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00574 PF00486 Transcriptional regulatory protein, C terminal ABTJ_00574 PF00072 Response regulator receiver domain ABTJ_00575 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABTJ_00579 PF01923 Cobalamin adenosyltransferase ABTJ_00580 PF00593 TonB dependent receptor ABTJ_00580 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00582 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABTJ_00583 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_00588 PF00290 Tryptophan synthase alpha chain ABTJ_00589 PF01039 Carboxyl transferase domain ABTJ_00590 PF08245 Mur ligase middle domain ABTJ_00590 PF02875 Mur ligase family, glutamate ligase domain ABTJ_00593 PF00753 Metallo-beta-lactamase superfamily ABTJ_00594 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABTJ_00594 PF00578 AhpC/TSA family ABTJ_00595 PF01043 SecA preprotein cross-linking domain ABTJ_00595 PF07516 SecA Wing and Scaffold domain ABTJ_00595 PF02810 SEC-C motif ABTJ_00595 PF07517 SecA DEAD-like domain ABTJ_00597 PF07690 Major Facilitator Superfamily ABTJ_00597 PF00083 Sugar (and other) transporter ABTJ_00598 PF03006 Haemolysin-III related ABTJ_00604 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABTJ_00604 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_00604 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABTJ_00605 PF02803 Thiolase, C-terminal domain ABTJ_00605 PF00108 Thiolase, N-terminal domain ABTJ_00606 PF12833 Helix-turn-helix domain ABTJ_00606 PF02311 AraC-like ligand binding domain ABTJ_00607 PF02515 CoA-transferase family III ABTJ_00608 PF04966 Carbohydrate-selective porin, OprB family ABTJ_00609 PF01011 PQQ enzyme repeat ABTJ_00610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABTJ_00610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABTJ_00612 PF00893 Small Multidrug Resistance protein ABTJ_00614 PF02803 Thiolase, C-terminal domain ABTJ_00614 PF00108 Thiolase, N-terminal domain ABTJ_00616 PF00691 OmpA family ABTJ_00616 PF13505 Outer membrane protein beta-barrel domain ABTJ_00618 PF01139 tRNA-splicing ligase RtcB ABTJ_00619 PF00324 Amino acid permease ABTJ_00620 PF08468 Methyltransferase small domain N-terminal ABTJ_00620 PF05175 Methyltransferase small domain ABTJ_00621 PF00860 Permease family ABTJ_00623 PF01741 Large-conductance mechanosensitive channel, MscL ABTJ_00626 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABTJ_00626 PF06827 Zinc finger found in FPG and IleRS ABTJ_00626 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABTJ_00627 PF02245 Methylpurine-DNA glycosylase (MPG) ABTJ_00628 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00628 PF00593 TonB dependent receptor ABTJ_00631 PF07715 TonB-dependent Receptor Plug Domain ABTJ_00631 PF00593 TonB dependent receptor ABTJ_00632 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_00635 PF13098 Thioredoxin-like domain ABTJ_00635 PF10411 Disulfide bond isomerase protein N-terminus ABTJ_00636 PF01571 Aminomethyltransferase folate-binding domain ABTJ_00638 PF04343 Protein of unknown function, DUF488 ABTJ_00639 PF08274 PhnA Zinc-Ribbon ABTJ_00639 PF03831 PhnA domain ABTJ_00640 PF07411 Domain of unknown function (DUF1508) ABTJ_00641 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABTJ_00641 PF04073 Aminoacyl-tRNA editing domain ABTJ_00641 PF03129 Anticodon binding domain ABTJ_00642 PF00873 AcrB/AcrD/AcrF family ABTJ_00645 PF00072 Response regulator receiver domain ABTJ_00646 PF00072 Response regulator receiver domain ABTJ_00647 PF01584 CheW-like domain ABTJ_00648 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABTJ_00648 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABTJ_00649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00649 PF00072 Response regulator receiver domain ABTJ_00649 PF01627 Hpt domain ABTJ_00649 PF01584 CheW-like domain ABTJ_00651 PF01546 Peptidase family M20/M25/M40 ABTJ_00651 PF07687 Peptidase dimerisation domain ABTJ_00652 PF08085 Entericidin EcnA/B family ABTJ_00654 PF04304 Protein of unknown function (DUF454) ABTJ_00655 PF17969 L,D-transpeptidase C-terminal domain ABTJ_00655 PF03734 L,D-transpeptidase catalytic domain ABTJ_00663 PF00258 Flavodoxin ABTJ_00663 PF00667 FAD binding domain ABTJ_00663 PF00175 Oxidoreductase NAD-binding domain ABTJ_00665 PF12805 FUSC-like inner membrane protein yccS ABTJ_00666 PF07690 Major Facilitator Superfamily ABTJ_00667 PF00881 Nitroreductase family ABTJ_00669 PF01235 Sodium:alanine symporter family ABTJ_00670 PF01734 Patatin-like phospholipase ABTJ_00671 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_00671 PF13291 ACT domain ABTJ_00672 PF05992 SbmA/BacA-like family ABTJ_00678 PF02637 GatB domain ABTJ_00678 PF02934 GatB/GatE catalytic domain ABTJ_00679 PF01425 Amidase ABTJ_00680 PF02686 Glu-tRNAGln amidotransferase C subunit ABTJ_00682 PF04085 rod shape-determining protein MreC ABTJ_00683 PF04093 rod shape-determining protein MreD ABTJ_00684 PF02545 Maf-like protein ABTJ_00685 PF00575 S1 RNA binding domain ABTJ_00685 PF10150 Ribonuclease E/G family ABTJ_00687 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABTJ_00687 PF06974 Protein of unknown function (DUF1298) ABTJ_00688 PF01507 Phosphoadenosine phosphosulfate reductase family ABTJ_00691 PF02525 Flavodoxin-like fold ABTJ_00695 PF02673 Bacitracin resistance protein BacA ABTJ_00696 PF06719 AraC-type transcriptional regulator N-terminus ABTJ_00696 PF12833 Helix-turn-helix domain ABTJ_00697 PF00550 Phosphopantetheine attachment site ABTJ_00697 PF14765 Polyketide synthase dehydratase ABTJ_00697 PF00698 Acyl transferase domain ABTJ_00697 PF02801 Beta-ketoacyl synthase, C-terminal domain ABTJ_00697 PF00109 Beta-ketoacyl synthase, N-terminal domain ABTJ_00697 PF16197 Ketoacyl-synthetase C-terminal extension ABTJ_00697 PF09277 Erythronolide synthase, docking ABTJ_00697 PF08990 Erythronolide synthase docking ABTJ_00697 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_00697 PF08659 KR domain ABTJ_00698 PF01965 DJ-1/PfpI family ABTJ_00700 PF00324 Amino acid permease ABTJ_00701 PF04303 PrpF protein ABTJ_00702 PF00348 Polyprenyl synthetase ABTJ_00703 PF04237 YjbR ABTJ_00704 PF01145 SPFH domain / Band 7 family ABTJ_00706 PF01734 Patatin-like phospholipase ABTJ_00710 PF00884 Sulfatase ABTJ_00710 PF08019 Phosphoethanolamine transferase EptA/EptB ABTJ_00711 PF00486 Transcriptional regulatory protein, C terminal ABTJ_00711 PF00072 Response regulator receiver domain ABTJ_00712 PF08521 Two-component sensor kinase N-terminal ABTJ_00712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_00712 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_00714 PF00909 Ammonium Transporter Family ABTJ_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00715 PF03466 LysR substrate binding domain ABTJ_00719 PF08264 Anticodon-binding domain of tRNA ABTJ_00719 PF00133 tRNA synthetases class I (I, L, M and V) ABTJ_00719 PF10458 Valyl tRNA synthetase tRNA binding arm ABTJ_00723 PF01906 Putative heavy-metal-binding ABTJ_00724 PF01906 Putative heavy-metal-binding ABTJ_00725 PF02321 Outer membrane efflux protein ABTJ_00726 PF00873 AcrB/AcrD/AcrF family ABTJ_00727 PF00529 HlyD membrane-fusion protein of T1SS ABTJ_00727 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_00728 PF01569 PAP2 superfamily ABTJ_00730 PF00348 Polyprenyl synthetase ABTJ_00731 PF00829 Ribosomal prokaryotic L21 protein ABTJ_00732 PF01016 Ribosomal L27 protein ABTJ_00733 PF03548 Outer membrane lipoprotein carrier protein LolA ABTJ_00735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABTJ_00735 PF02403 Seryl-tRNA synthetase N-terminal domain ABTJ_00736 PF10414 Sirohaem synthase dimerisation region ABTJ_00736 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABTJ_00736 PF14824 Sirohaem biosynthesis protein central ABTJ_00737 PF00588 SpoU rRNA Methylase family ABTJ_00738 PF01638 HxlR-like helix-turn-helix ABTJ_00739 PF03358 NADPH-dependent FMN reductase ABTJ_00740 PF13520 Amino acid permease ABTJ_00741 PF00465 Iron-containing alcohol dehydrogenase ABTJ_00743 PF03099 Biotin/lipoate A/B protein ligase family ABTJ_00744 PF04359 Protein of unknown function (DUF493) ABTJ_00745 PF04546 Sigma-70, non-essential region ABTJ_00745 PF03979 Sigma-70 factor, region 1.1 ABTJ_00745 PF00140 Sigma-70 factor, region 1.2 ABTJ_00745 PF04542 Sigma-70 region 2 ABTJ_00745 PF04539 Sigma-70 region 3 ABTJ_00745 PF04545 Sigma-70, region 4 ABTJ_00751 PF00285 Citrate synthase, C-terminal domain ABTJ_00752 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABTJ_00753 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABTJ_00754 PF02910 Fumarate reductase flavoprotein C-term ABTJ_00754 PF00890 FAD binding domain ABTJ_00755 PF13085 2Fe-2S iron-sulfur cluster binding domain ABTJ_00756 PF16078 2-oxoglutarate dehydrogenase N-terminus ABTJ_00756 PF00676 Dehydrogenase E1 component ABTJ_00756 PF16870 2-oxoglutarate dehydrogenase C-terminal ABTJ_00756 PF02779 Transketolase, pyrimidine binding domain ABTJ_00757 PF00364 Biotin-requiring enzyme ABTJ_00757 PF02817 e3 binding domain ABTJ_00757 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABTJ_00758 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABTJ_00758 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_00759 PF08442 ATP-grasp domain ABTJ_00759 PF00549 CoA-ligase ABTJ_00760 PF00549 CoA-ligase ABTJ_00760 PF02629 CoA binding domain ABTJ_00761 PF00579 tRNA synthetases class I (W and Y) ABTJ_00762 PF05661 Protein of unknown function (DUF808) ABTJ_00763 PF04228 Putative neutral zinc metallopeptidase ABTJ_00764 PF00999 Sodium/hydrogen exchanger family ABTJ_00774 PF09587 Bacterial capsule synthesis protein PGA_cap ABTJ_00776 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABTJ_00777 PF00582 Universal stress protein family ABTJ_00778 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_00779 PF01272 Transcription elongation factor, GreA/GreB, C-term ABTJ_00779 PF03449 Transcription elongation factor, N-terminal ABTJ_00780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABTJ_00780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABTJ_00780 PF02142 MGS-like domain ABTJ_00781 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABTJ_00781 PF00117 Glutamine amidotransferase class-I ABTJ_00784 PF01985 CRS1 / YhbY (CRM) domain ABTJ_00785 PF01728 FtsJ-like methyltransferase ABTJ_00786 PF17862 AAA+ lid domain ABTJ_00786 PF06480 FtsH Extracellular ABTJ_00786 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_00786 PF01434 Peptidase family M41 ABTJ_00787 PF00809 Pterin binding enzyme ABTJ_00791 PF09423 PhoD-like phosphatase ABTJ_00791 PF16655 PhoD-like phosphatase, N-terminal domain ABTJ_00794 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABTJ_00794 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABTJ_00797 PF00083 Sugar (and other) transporter ABTJ_00798 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABTJ_00798 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABTJ_00799 PF01266 FAD dependent oxidoreductase ABTJ_00799 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABTJ_00800 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABTJ_00800 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABTJ_00801 PF00781 Diacylglycerol kinase catalytic domain ABTJ_00802 PF00149 Calcineurin-like phosphoesterase ABTJ_00804 PF00166 Chaperonin 10 Kd subunit ABTJ_00805 PF00118 TCP-1/cpn60 chaperonin family ABTJ_00806 PF01219 Prokaryotic diacylglycerol kinase ABTJ_00807 PF00753 Metallo-beta-lactamase superfamily ABTJ_00813 PF01435 Peptidase family M48 ABTJ_00814 PF01464 Transglycosylase SLT domain ABTJ_00815 PF01171 PP-loop family ABTJ_00817 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABTJ_00817 PF01464 Transglycosylase SLT domain ABTJ_00818 PF03449 Transcription elongation factor, N-terminal ABTJ_00818 PF01272 Transcription elongation factor, GreA/GreB, C-term ABTJ_00821 PF00668 Condensation domain ABTJ_00821 PF00550 Phosphopantetheine attachment site ABTJ_00821 PF00975 Thioesterase domain ABTJ_00821 PF13193 AMP-binding enzyme C-terminal domain ABTJ_00821 PF00501 AMP-binding enzyme ABTJ_00826 PF00881 Nitroreductase family ABTJ_00829 PF02595 Glycerate kinase family ABTJ_00830 PF00384 Molybdopterin oxidoreductase ABTJ_00831 PF02634 FdhD/NarQ family ABTJ_00832 PF06803 Protein of unknown function (DUF1232) ABTJ_00833 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABTJ_00833 PF11890 Domain of unknown function (DUF3410) ABTJ_00833 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABTJ_00834 PF00152 tRNA synthetases class II (D, K and N) ABTJ_00837 PF18073 Rubredoxin metal binding domain ABTJ_00838 PF00324 Amino acid permease ABTJ_00840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABTJ_00840 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABTJ_00841 PF01678 Diaminopimelate epimerase ABTJ_00842 PF01810 LysE type translocator ABTJ_00843 PF02899 Phage integrase, N-terminal SAM-like domain ABTJ_00843 PF00589 Phage integrase family ABTJ_00844 PF01012 Electron transfer flavoprotein domain ABTJ_00845 PF00766 Electron transfer flavoprotein FAD-binding domain ABTJ_00845 PF01012 Electron transfer flavoprotein domain ABTJ_00846 PF00521 DNA gyrase/topoisomerase IV, subunit A ABTJ_00846 PF03989 DNA gyrase C-terminal domain, beta-propeller ABTJ_00849 PF00535 Glycosyl transferase family 2 ABTJ_00853 PF13533 Biotin-lipoyl like ABTJ_00855 PF00266 Aminotransferase class-V ABTJ_00858 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABTJ_00860 PF02687 FtsX-like permease family ABTJ_00860 PF12704 MacB-like periplasmic core domain ABTJ_00861 PF00005 ABC transporter ABTJ_00862 PF13567 Domain of unknown function (DUF4131) ABTJ_00862 PF00753 Metallo-beta-lactamase superfamily ABTJ_00862 PF03772 Competence protein ABTJ_00864 PF01343 Peptidase family S49 ABTJ_00864 PF06965 Na+/H+ antiporter 1 ABTJ_00865 PF12697 Alpha/beta hydrolase family ABTJ_00866 PF00551 Formyl transferase ABTJ_00867 PF00586 AIR synthase related protein, N-terminal domain ABTJ_00867 PF02769 AIR synthase related protein, C-terminal domain ABTJ_00868 PF01594 AI-2E family transporter ABTJ_00869 PF00308 Bacterial dnaA protein ABTJ_00869 PF08299 Bacterial dnaA protein helix-turn-helix ABTJ_00869 PF11638 DnaA N-terminal domain ABTJ_00875 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABTJ_00875 PF00588 SpoU rRNA Methylase family ABTJ_00876 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABTJ_00878 PF00691 OmpA family ABTJ_00879 PF07676 WD40-like Beta Propeller Repeat ABTJ_00879 PF04052 TolB amino-terminal domain ABTJ_00881 PF02472 Biopolymer transport protein ExbD/TolR ABTJ_00882 PF01618 MotA/TolQ/ExbB proton channel family ABTJ_00883 PF03061 Thioesterase superfamily ABTJ_00884 PF07687 Peptidase dimerisation domain ABTJ_00884 PF01546 Peptidase family M20/M25/M40 ABTJ_00885 PF05491 RuvB C-terminal winged helix domain ABTJ_00885 PF17864 RuvB AAA lid domain ABTJ_00885 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABTJ_00886 PF07499 RuvA, C-terminal domain ABTJ_00886 PF01330 RuvA N terminal domain ABTJ_00887 PF01966 HD domain ABTJ_00888 PF02769 AIR synthase related protein, C-terminal domain ABTJ_00888 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABTJ_00888 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABTJ_00889 PF07690 Major Facilitator Superfamily ABTJ_00891 PF01784 NIF3 (NGG1p interacting factor 3) ABTJ_00892 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_00893 PF00293 NUDIX domain ABTJ_00893 PF01467 Cytidylyltransferase-like ABTJ_00895 PF00578 AhpC/TSA family ABTJ_00898 PF06508 Queuosine biosynthesis protein QueC ABTJ_00900 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_00900 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABTJ_00900 PF14602 Hexapeptide repeat of succinyl-transferase ABTJ_00902 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_00902 PF03466 LysR substrate binding domain ABTJ_00903 PF12857 TOBE-like domain ABTJ_00903 PF00005 ABC transporter ABTJ_00904 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_00905 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_00908 PF01063 Amino-transferase class IV ABTJ_00909 PF02618 YceG-like family ABTJ_00910 PF02223 Thymidylate kinase ABTJ_00912 PF00890 FAD binding domain ABTJ_00912 PF02910 Fumarate reductase flavoprotein C-term ABTJ_00913 PF13180 PDZ domain ABTJ_00915 PF00679 Elongation factor G C-terminus ABTJ_00915 PF00009 Elongation factor Tu GTP binding domain ABTJ_00915 PF03144 Elongation factor Tu domain 2 ABTJ_00915 PF06421 GTP-binding protein LepA C-terminus ABTJ_00916 PF10502 Signal peptidase, peptidase S26 ABTJ_00918 PF00035 Double-stranded RNA binding motif ABTJ_00918 PF14622 Ribonuclease-III-like ABTJ_00919 PF07650 KH domain ABTJ_00919 PF01926 50S ribosome-binding GTPase ABTJ_00921 PF02565 Recombination protein O C terminal ABTJ_00921 PF11967 Recombination protein O N terminal ABTJ_00922 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABTJ_00923 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABTJ_00924 PF00106 short chain dehydrogenase ABTJ_00931 PF17151 Periplasmic sensor domain ABTJ_00931 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_00933 PF17757 UvrB interaction domain ABTJ_00933 PF02151 UvrB/uvrC motif ABTJ_00933 PF00271 Helicase conserved C-terminal domain ABTJ_00933 PF04851 Type III restriction enzyme, res subunit ABTJ_00933 PF12344 Ultra-violet resistance protein B ABTJ_00935 PF00892 EamA-like transporter family ABTJ_00936 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABTJ_00936 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABTJ_00939 PF01018 GTP1/OBG ABTJ_00939 PF01926 50S ribosome-binding GTPase ABTJ_00940 PF00696 Amino acid kinase family ABTJ_00940 PF01472 PUA domain ABTJ_00942 PF07759 Protein of unknown function (DUF1615) ABTJ_01012 PF00589 Phage integrase family ABTJ_01013 PF01207 Dihydrouridine synthase (Dus) ABTJ_01014 PF03060 Nitronate monooxygenase ABTJ_01017 PF02350 UDP-N-acetylglucosamine 2-epimerase ABTJ_01023 PF03441 FAD binding domain of DNA photolyase ABTJ_01023 PF00875 DNA photolyase ABTJ_01024 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABTJ_01025 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01026 PF00768 D-alanyl-D-alanine carboxypeptidase ABTJ_01026 PF07943 Penicillin-binding protein 5, C-terminal domain ABTJ_01028 PF03971 Monomeric isocitrate dehydrogenase ABTJ_01029 PF00849 RNA pseudouridylate synthase ABTJ_01030 PF00180 Isocitrate/isopropylmalate dehydrogenase ABTJ_01033 PF06779 Uncharacterised MFS-type transporter YbfB ABTJ_01034 PF03466 LysR substrate binding domain ABTJ_01034 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01036 PF02567 Phenazine biosynthesis-like protein ABTJ_01037 PF00675 Insulinase (Peptidase family M16) ABTJ_01037 PF05193 Peptidase M16 inactive domain ABTJ_01042 PF02581 Thiamine monophosphate synthase ABTJ_01043 PF00202 Aminotransferase class-III ABTJ_01045 PF00849 RNA pseudouridylate synthase ABTJ_01046 PF00271 Helicase conserved C-terminal domain ABTJ_01046 PF12137 RNA polymerase recycling family C-terminal ABTJ_01046 PF00176 SNF2 family N-terminal domain ABTJ_01046 PF18337 RapA N-terminal Tudor like domain ABTJ_01046 PF18339 RapA N-terminal Tudor like domain 1 ABTJ_01048 PF00440 Bacterial regulatory proteins, tetR family ABTJ_01049 PF00175 Oxidoreductase NAD-binding domain ABTJ_01049 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_01049 PF00970 Oxidoreductase FAD-binding domain ABTJ_01050 PF00487 Fatty acid desaturase ABTJ_01052 PF17754 MftR C-terminal domain ABTJ_01052 PF00440 Bacterial regulatory proteins, tetR family ABTJ_01054 PF00202 Aminotransferase class-III ABTJ_01055 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABTJ_01056 PF00171 Aldehyde dehydrogenase family ABTJ_01057 PF01037 Lrp/AsnC ligand binding domain ABTJ_01058 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABTJ_01058 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABTJ_01058 PF00205 Thiamine pyrophosphate enzyme, central domain ABTJ_01059 PF00324 Amino acid permease ABTJ_01060 PF12849 PBP superfamily domain ABTJ_01061 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01062 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01063 PF00005 ABC transporter ABTJ_01064 PF08496 Peptidase family S49 N-terminal ABTJ_01064 PF01343 Peptidase family S49 ABTJ_01067 PF08328 Adenylosuccinate lyase C-terminal ABTJ_01067 PF00206 Lyase ABTJ_01068 PF04356 Protein of unknown function (DUF489) ABTJ_01070 PF00293 NUDIX domain ABTJ_01070 PF13344 Haloacid dehalogenase-like hydrolase ABTJ_01071 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_01072 PF00768 D-alanyl-D-alanine carboxypeptidase ABTJ_01072 PF07943 Penicillin-binding protein 5, C-terminal domain ABTJ_01075 PF01975 Survival protein SurE ABTJ_01076 PF01551 Peptidase family M23 ABTJ_01076 PF01476 LysM domain ABTJ_01077 PF03466 LysR substrate binding domain ABTJ_01077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01078 PF13654 AAA domain ABTJ_01078 PF05362 Lon protease (S16) C-terminal proteolytic domain ABTJ_01079 PF07690 Major Facilitator Superfamily ABTJ_01080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABTJ_01081 PF13593 SBF-like CPA transporter family (DUF4137) ABTJ_01082 PF01197 Ribosomal protein L31 ABTJ_01085 PF04055 Radical SAM superfamily ABTJ_01086 PF09285 Elongation factor P, C-terminal ABTJ_01086 PF01132 Elongation factor P (EF-P) OB domain ABTJ_01086 PF08207 Elongation factor P (EF-P) KOW-like domain ABTJ_01087 PF13722 5TM C-terminal transporter carbon starvation CstA ABTJ_01087 PF02554 Carbon starvation protein CstA ABTJ_01088 PF04328 Selenoprotein, putative ABTJ_01095 PF06018 CodY GAF-like domain ABTJ_01095 PF17853 GGDEF-like domain ABTJ_01095 PF13556 PucR C-terminal helix-turn-helix domain ABTJ_01098 PF00171 Aldehyde dehydrogenase family ABTJ_01099 PF00324 Amino acid permease ABTJ_01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01100 PF03466 LysR substrate binding domain ABTJ_01101 PF02028 BCCT, betaine/carnitine/choline family transporter ABTJ_01102 PF02028 BCCT, betaine/carnitine/choline family transporter ABTJ_01103 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABTJ_01103 PF00355 Rieske [2Fe-2S] domain ABTJ_01105 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01105 PF18113 Rubredoxin binding C-terminal domain ABTJ_01106 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABTJ_01106 PF01266 FAD dependent oxidoreductase ABTJ_01110 PF00892 EamA-like transporter family ABTJ_01112 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ABTJ_01113 PF00083 Sugar (and other) transporter ABTJ_01114 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABTJ_01114 PF13378 Enolase C-terminal domain-like ABTJ_01115 PF08990 Erythronolide synthase docking ABTJ_01115 PF09277 Erythronolide synthase, docking ABTJ_01115 PF00698 Acyl transferase domain ABTJ_01115 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_01115 PF00109 Beta-ketoacyl synthase, N-terminal domain ABTJ_01115 PF02801 Beta-ketoacyl synthase, C-terminal domain ABTJ_01115 PF16197 Ketoacyl-synthetase C-terminal extension ABTJ_01115 PF14765 Polyketide synthase dehydratase ABTJ_01115 PF08659 KR domain ABTJ_01115 PF00550 Phosphopantetheine attachment site ABTJ_01116 PF00440 Bacterial regulatory proteins, tetR family ABTJ_01119 PF17954 Quercetinase C-terminal cupin domain ABTJ_01119 PF02678 Pirin ABTJ_01120 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_01121 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_01122 PF13309 HTH domain ABTJ_01122 PF08348 YheO-like PAS domain ABTJ_01124 PF00501 AMP-binding enzyme ABTJ_01124 PF13193 AMP-binding enzyme C-terminal domain ABTJ_01124 PF00668 Condensation domain ABTJ_01124 PF00550 Phosphopantetheine attachment site ABTJ_01125 PF00501 AMP-binding enzyme ABTJ_01125 PF13193 AMP-binding enzyme C-terminal domain ABTJ_01125 PF00668 Condensation domain ABTJ_01125 PF00550 Phosphopantetheine attachment site ABTJ_01125 PF00975 Thioesterase domain ABTJ_01128 PF01032 FecCD transport family ABTJ_01129 PF01032 FecCD transport family ABTJ_01130 PF00005 ABC transporter ABTJ_01131 PF01497 Periplasmic binding protein ABTJ_01132 PF07715 TonB-dependent Receptor Plug Domain ABTJ_01132 PF00593 TonB dependent receptor ABTJ_01133 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABTJ_01134 PF00668 Condensation domain ABTJ_01134 PF00501 AMP-binding enzyme ABTJ_01134 PF00550 Phosphopantetheine attachment site ABTJ_01135 PF13193 AMP-binding enzyme C-terminal domain ABTJ_01135 PF00501 AMP-binding enzyme ABTJ_01136 PF00550 Phosphopantetheine attachment site ABTJ_01136 PF00857 Isochorismatase family ABTJ_01137 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABTJ_01139 PF00664 ABC transporter transmembrane region ABTJ_01139 PF00005 ABC transporter ABTJ_01140 PF00005 ABC transporter ABTJ_01140 PF00664 ABC transporter transmembrane region ABTJ_01141 PF00975 Thioesterase domain ABTJ_01143 PF00425 chorismate binding enzyme ABTJ_01145 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABTJ_01146 PF05675 Protein of unknown function (DUF817) ABTJ_01149 PF00144 Beta-lactamase ABTJ_01153 PF01799 [2Fe-2S] binding domain ABTJ_01153 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_01154 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABTJ_01154 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABTJ_01157 PF00218 Indole-3-glycerol phosphate synthase ABTJ_01158 PF00591 Glycosyl transferase family, a/b domain ABTJ_01158 PF02885 Glycosyl transferase family, helical bundle domain ABTJ_01159 PF00593 TonB dependent receptor ABTJ_01159 PF07715 TonB-dependent Receptor Plug Domain ABTJ_01160 PF11838 ERAP1-like C-terminal domain ABTJ_01160 PF01433 Peptidase family M1 domain ABTJ_01161 PF00117 Glutamine amidotransferase class-I ABTJ_01163 PF00854 POT family ABTJ_01165 PF04345 Chorismate lyase ABTJ_01166 PF01040 UbiA prenyltransferase family ABTJ_01173 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABTJ_01173 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABTJ_01174 PF01784 NIF3 (NGG1p interacting factor 3) ABTJ_01175 PF13180 PDZ domain ABTJ_01176 PF01743 Poly A polymerase head domain ABTJ_01176 PF12627 Probable RNA and SrmB- binding site of polymerase A ABTJ_01177 PF01515 Phosphate acetyl/butaryl transferase ABTJ_01177 PF03949 Malic enzyme, NAD binding domain ABTJ_01177 PF00390 Malic enzyme, N-terminal domain ABTJ_01178 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_01178 PF00563 EAL domain ABTJ_01178 PF03707 Bacterial signalling protein N terminal repeat ABTJ_01179 PF04452 RNA methyltransferase ABTJ_01180 PF02219 Methylenetetrahydrofolate reductase ABTJ_01181 PF05221 S-adenosyl-L-homocysteine hydrolase ABTJ_01181 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABTJ_01184 PF09317 Domain of unknown function (DUF1974) ABTJ_01184 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_01184 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_01185 PF04055 Radical SAM superfamily ABTJ_01186 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABTJ_01186 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01189 PF07690 Major Facilitator Superfamily ABTJ_01191 PF00557 Metallopeptidase family M24 ABTJ_01192 PF00318 Ribosomal protein S2 ABTJ_01193 PF00889 Elongation factor TS ABTJ_01195 PF12833 Helix-turn-helix domain ABTJ_01199 PF03330 Lytic transglycolase ABTJ_01199 PF05036 Sporulation related domain ABTJ_01200 PF13406 Transglycosylase SLT domain ABTJ_01201 PF01098 Cell cycle protein ABTJ_01203 PF14489 QueF-like protein ABTJ_01203 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABTJ_01204 PF01061 ABC-2 type transporter ABTJ_01205 PF00005 ABC transporter ABTJ_01211 PF00464 Serine hydroxymethyltransferase ABTJ_01212 PF02321 Outer membrane efflux protein ABTJ_01213 PF00873 AcrB/AcrD/AcrF family ABTJ_01214 PF13533 Biotin-lipoyl like ABTJ_01216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01216 PF03466 LysR substrate binding domain ABTJ_01217 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABTJ_01218 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01219 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01220 PF00005 ABC transporter ABTJ_01221 PF00893 Small Multidrug Resistance protein ABTJ_01222 PF00037 4Fe-4S binding domain ABTJ_01224 PF00155 Aminotransferase class I and II ABTJ_01224 PF00392 Bacterial regulatory proteins, gntR family ABTJ_01225 PF02567 Phenazine biosynthesis-like protein ABTJ_01226 PF00970 Oxidoreductase FAD-binding domain ABTJ_01226 PF00175 Oxidoreductase NAD-binding domain ABTJ_01227 PF18389 TrmO C-terminal domain ABTJ_01227 PF01980 tRNA-methyltransferase O ABTJ_01229 PF00437 Type II/IV secretion system protein ABTJ_01231 PF00072 Response regulator receiver domain ABTJ_01231 PF00486 Transcriptional regulatory protein, C terminal ABTJ_01232 PF08521 Two-component sensor kinase N-terminal ABTJ_01232 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_01232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_01234 PF00293 NUDIX domain ABTJ_01236 PF00912 Transglycosylase ABTJ_01236 PF00905 Penicillin binding protein transpeptidase domain ABTJ_01236 PF14814 Bifunctional transglycosylase second domain ABTJ_01237 PF01513 ATP-NAD kinase ABTJ_01238 PF07023 Protein of unknown function (DUF1315) ABTJ_01239 PF00591 Glycosyl transferase family, a/b domain ABTJ_01239 PF02885 Glycosyl transferase family, helical bundle domain ABTJ_01240 PF00375 Sodium:dicarboxylate symporter family ABTJ_01241 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_01241 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_01241 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_01242 PF00756 Putative esterase ABTJ_01243 PF01842 ACT domain ABTJ_01243 PF01817 Chorismate mutase type II ABTJ_01243 PF00800 Prephenate dehydratase ABTJ_01244 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABTJ_01246 PF01546 Peptidase family M20/M25/M40 ABTJ_01246 PF07687 Peptidase dimerisation domain ABTJ_01247 PF12706 Beta-lactamase superfamily domain ABTJ_01249 PF03883 Peroxide stress protein YaaA ABTJ_01251 PF05690 Thiazole biosynthesis protein ThiG ABTJ_01253 PF04241 Protein of unknown function (DUF423) ABTJ_01254 PF04545 Sigma-70, region 4 ABTJ_01254 PF00140 Sigma-70 factor, region 1.2 ABTJ_01254 PF04542 Sigma-70 region 2 ABTJ_01256 PF00313 'Cold-shock' DNA-binding domain ABTJ_01257 PF00271 Helicase conserved C-terminal domain ABTJ_01257 PF00270 DEAD/DEAH box helicase ABTJ_01259 PF00881 Nitroreductase family ABTJ_01260 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABTJ_01260 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABTJ_01264 PF01180 Dihydroorotate dehydrogenase ABTJ_01265 PF02674 Colicin V production protein ABTJ_01266 PF00156 Phosphoribosyl transferase domain ABTJ_01269 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABTJ_01269 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABTJ_01270 PF01435 Peptidase family M48 ABTJ_01271 PF09424 Yqey-like protein ABTJ_01272 PF01165 Ribosomal protein S21 ABTJ_01273 PF00814 Glycoprotease family ABTJ_01277 PF00069 Protein kinase domain ABTJ_01282 PF03466 LysR substrate binding domain ABTJ_01282 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01283 PF00202 Aminotransferase class-III ABTJ_01284 PF00171 Aldehyde dehydrogenase family ABTJ_01285 PF00324 Amino acid permease ABTJ_01292 PF04076 Bacterial OB fold (BOF) protein ABTJ_01297 PF00561 alpha/beta hydrolase fold ABTJ_01298 PF03616 Sodium/glutamate symporter ABTJ_01300 PF00392 Bacterial regulatory proteins, gntR family ABTJ_01300 PF07729 FCD domain ABTJ_01310 PF00083 Sugar (and other) transporter ABTJ_01310 PF08946 Osmosensory transporter coiled coil ABTJ_01313 PF00155 Aminotransferase class I and II ABTJ_01314 PF06826 Predicted Permease Membrane Region ABTJ_01314 PF02080 TrkA-C domain ABTJ_01316 PF04403 Paraquat-inducible protein A ABTJ_01317 PF02470 MlaD protein ABTJ_01319 PF01177 Asp/Glu/Hydantoin racemase ABTJ_01320 PF00892 EamA-like transporter family ABTJ_01321 PF07995 Glucose / Sorbosone dehydrogenase ABTJ_01323 PF13610 DDE domain ABTJ_01324 PF13495 Phage integrase, N-terminal SAM-like domain ABTJ_01324 PF00589 Phage integrase family ABTJ_01326 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_01327 PF01909 Nucleotidyltransferase domain ABTJ_01327 PF13427 Domain of unknown function (DUF4111) ABTJ_01328 PF00893 Small Multidrug Resistance protein ABTJ_01329 PF00809 Pterin binding enzyme ABTJ_01331 PF13737 Transposase DDE domain ABTJ_01332 PF07091 Ribosomal RNA methyltransferase (FmrO) ABTJ_01336 PF01636 Phosphotransferase enzyme family ABTJ_01338 PF13007 Transposase C of IS166 homeodomain ABTJ_01338 PF03050 Transposase IS66 family ABTJ_01338 PF13005 zinc-finger binding domain of transposase IS66 ABTJ_01338 PF13817 IS66 C-terminal element ABTJ_01342 PF01051 Initiator Replication protein ABTJ_01343 PF13610 DDE domain ABTJ_01346 PF00375 Sodium:dicarboxylate symporter family ABTJ_01350 PF00753 Metallo-beta-lactamase superfamily ABTJ_01350 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABTJ_01351 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01352 PF00005 ABC transporter ABTJ_01352 PF09383 NIL domain ABTJ_01353 PF03180 NLPA lipoprotein ABTJ_01354 PF02843 Phosphoribosylglycinamide synthetase, C domain ABTJ_01354 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABTJ_01354 PF02844 Phosphoribosylglycinamide synthetase, N domain ABTJ_01355 PF01808 AICARFT/IMPCHase bienzyme ABTJ_01355 PF02142 MGS-like domain ABTJ_01356 PF02954 Bacterial regulatory protein, Fis family ABTJ_01360 PF01134 Glucose inhibited division protein A ABTJ_01360 PF13932 GidA associated domain ABTJ_01362 PF14403 Circularly permuted ATP-grasp type 2 ABTJ_01364 PF01841 Transglutaminase-like superfamily ABTJ_01364 PF08379 Bacterial transglutaminase-like N-terminal region ABTJ_01366 PF00842 Alanine racemase, C-terminal domain ABTJ_01366 PF01168 Alanine racemase, N-terminal domain ABTJ_01367 PF03796 DnaB-like helicase C terminal domain ABTJ_01367 PF00772 DnaB-like helicase N terminal domain ABTJ_01368 PF01281 Ribosomal protein L9, N-terminal domain ABTJ_01368 PF03948 Ribosomal protein L9, C-terminal domain ABTJ_01369 PF01084 Ribosomal protein S18 ABTJ_01370 PF01250 Ribosomal protein S6 ABTJ_01371 PF01040 UbiA prenyltransferase family ABTJ_01372 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABTJ_01373 PF00510 Cytochrome c oxidase subunit III ABTJ_01374 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABTJ_01375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABTJ_01375 PF06481 COX Aromatic Rich Motif ABTJ_01377 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABTJ_01377 PF02896 PEP-utilising enzyme, TIM barrel domain ABTJ_01377 PF00391 PEP-utilising enzyme, mobile domain ABTJ_01378 PF03618 Kinase/pyrophosphorylase ABTJ_01380 PF01522 Polysaccharide deacetylase ABTJ_01380 PF14883 Hypothetical glycosyl hydrolase family 13 ABTJ_01381 PF00535 Glycosyl transferase family 2 ABTJ_01382 PF13994 PgaD-like protein ABTJ_01384 PF00296 Luciferase-like monooxygenase ABTJ_01387 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01387 PF03466 LysR substrate binding domain ABTJ_01389 PF00472 RF-1 domain ABTJ_01389 PF03462 PCRF domain ABTJ_01390 PF13847 Methyltransferase domain ABTJ_01390 PF17827 PrmC N-terminal domain ABTJ_01391 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01392 PF09084 NMT1/THI5 like ABTJ_01393 PF12833 Helix-turn-helix domain ABTJ_01394 PF00106 short chain dehydrogenase ABTJ_01395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_01395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_01395 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_01396 PF00501 AMP-binding enzyme ABTJ_01396 PF13193 AMP-binding enzyme C-terminal domain ABTJ_01397 PF01613 Flavin reductase like domain ABTJ_01398 PF00899 ThiF family ABTJ_01399 PF03109 ABC1 family ABTJ_01402 PF03814 Potassium-transporting ATPase A subunit ABTJ_01404 PF02669 K+-transporting ATPase, c chain ABTJ_01405 PF02702 Osmosensitive K+ channel His kinase sensor domain ABTJ_01405 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_01405 PF13493 Domain of unknown function (DUF4118) ABTJ_01406 PF00486 Transcriptional regulatory protein, C terminal ABTJ_01406 PF00072 Response regulator receiver domain ABTJ_01407 PF00120 Glutamine synthetase, catalytic domain ABTJ_01409 PF03232 Ubiquinone biosynthesis protein COQ7 ABTJ_01410 PF07690 Major Facilitator Superfamily ABTJ_01411 PF01103 Surface antigen ABTJ_01411 PF17243 POTRA domain TamA domain 1 ABTJ_01411 PF07244 Surface antigen variable number repeat ABTJ_01414 PF00330 Aconitase family (aconitate hydratase) ABTJ_01414 PF11791 Aconitate B N-terminal domain ABTJ_01414 PF06434 Aconitate hydratase 2 N-terminus ABTJ_01416 PF00027 Cyclic nucleotide-binding domain ABTJ_01416 PF00520 Ion transport protein ABTJ_01417 PF07690 Major Facilitator Superfamily ABTJ_01420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01420 PF03466 LysR substrate binding domain ABTJ_01421 PF04284 Protein of unknown function (DUF441) ABTJ_01423 PF01479 S4 domain ABTJ_01423 PF00849 RNA pseudouridylate synthase ABTJ_01426 PF01479 S4 domain ABTJ_01426 PF00849 RNA pseudouridylate synthase ABTJ_01427 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABTJ_01428 PF01119 DNA mismatch repair protein, C-terminal domain ABTJ_01428 PF08676 MutL C terminal dimerisation domain ABTJ_01430 PF17209 Hfq protein ABTJ_01432 PF00881 Nitroreductase family ABTJ_01436 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABTJ_01437 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABTJ_01437 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABTJ_01438 PF02540 NAD synthase ABTJ_01438 PF00958 GMP synthase C terminal domain ABTJ_01438 PF00117 Glutamine amidotransferase class-I ABTJ_01439 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABTJ_01440 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABTJ_01441 PF13520 Amino acid permease ABTJ_01442 PF00171 Aldehyde dehydrogenase family ABTJ_01445 PF00465 Iron-containing alcohol dehydrogenase ABTJ_01446 PF14493 Helix-turn-helix domain ABTJ_01446 PF05970 PIF1-like helicase ABTJ_01448 PF06445 GyrI-like small molecule binding domain ABTJ_01449 PF02110 Hydroxyethylthiazole kinase family ABTJ_01452 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABTJ_01452 PF01433 Peptidase family M1 domain ABTJ_01452 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABTJ_01454 PF00106 short chain dehydrogenase ABTJ_01456 PF01817 Chorismate mutase type II ABTJ_01457 PF01037 Lrp/AsnC ligand binding domain ABTJ_01459 PF00440 Bacterial regulatory proteins, tetR family ABTJ_01460 PF00593 TonB dependent receptor ABTJ_01460 PF07715 TonB-dependent Receptor Plug Domain ABTJ_01461 PF00924 Mechanosensitive ion channel ABTJ_01469 PF00593 TonB dependent receptor ABTJ_01469 PF07715 TonB-dependent Receptor Plug Domain ABTJ_01473 PF12848 ABC transporter ABTJ_01473 PF00005 ABC transporter ABTJ_01474 PF00582 Universal stress protein family ABTJ_01479 PF00690 Cation transporter/ATPase, N-terminus ABTJ_01479 PF00689 Cation transporting ATPase, C-terminus ABTJ_01480 PF02308 MgtC family ABTJ_01481 PF03594 Benzoate membrane transport protein ABTJ_01482 PF01037 Lrp/AsnC ligand binding domain ABTJ_01483 PF01810 LysE type translocator ABTJ_01485 PF03466 LysR substrate binding domain ABTJ_01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01487 PF02803 Thiolase, C-terminal domain ABTJ_01487 PF00108 Thiolase, N-terminal domain ABTJ_01492 PF07690 Major Facilitator Superfamily ABTJ_01493 PF12169 DNA polymerase III subunits gamma and tau domain III ABTJ_01493 PF12170 DNA polymerase III tau subunit V interacting with alpha ABTJ_01493 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABTJ_01495 PF04185 Phosphoesterase family ABTJ_01495 PF05506 Domain of unknown function (DUF756) ABTJ_01496 PF03061 Thioesterase superfamily ABTJ_01497 PF00465 Iron-containing alcohol dehydrogenase ABTJ_01499 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABTJ_01500 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABTJ_01500 PF01565 FAD binding domain ABTJ_01503 PF01645 Conserved region in glutamate synthase ABTJ_01516 PF00717 Peptidase S24-like ABTJ_01516 PF01726 LexA DNA binding domain ABTJ_01517 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ABTJ_01569 PF13333 Integrase core domain ABTJ_01569 PF00665 Integrase core domain ABTJ_01569 PF13276 HTH-like domain ABTJ_01571 PF12832 MFS_1 like family ABTJ_01573 PF02785 Biotin carboxylase C-terminal domain ABTJ_01573 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABTJ_01573 PF00289 Biotin carboxylase, N-terminal domain ABTJ_01574 PF00364 Biotin-requiring enzyme ABTJ_01575 PF01220 Dehydroquinase class II ABTJ_01576 PF11799 impB/mucB/samB family C-terminal domain ABTJ_01576 PF00817 impB/mucB/samB family ABTJ_01576 PF13438 Domain of unknown function (DUF4113) ABTJ_01577 PF00005 ABC transporter ABTJ_01578 PF00486 Transcriptional regulatory protein, C terminal ABTJ_01578 PF00072 Response regulator receiver domain ABTJ_01580 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABTJ_01580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABTJ_01580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABTJ_01580 PF04324 BFD-like [2Fe-2S] binding domain ABTJ_01580 PF13806 Rieske-like [2Fe-2S] domain ABTJ_01580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01581 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01581 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABTJ_01581 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABTJ_01581 PF04324 BFD-like [2Fe-2S] binding domain ABTJ_01581 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABTJ_01582 PF01568 Molydopterin dinucleotide binding domain ABTJ_01582 PF04324 BFD-like [2Fe-2S] binding domain ABTJ_01582 PF00384 Molybdopterin oxidoreductase ABTJ_01582 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABTJ_01583 PF12804 MobA-like NTP transferase domain ABTJ_01584 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABTJ_01584 PF00384 Molybdopterin oxidoreductase ABTJ_01584 PF01568 Molydopterin dinucleotide binding domain ABTJ_01585 PF06463 Molybdenum Cofactor Synthesis C ABTJ_01585 PF04055 Radical SAM superfamily ABTJ_01587 PF02391 MoaE protein ABTJ_01588 PF01967 MoaC family ABTJ_01588 PF00994 Probable molybdopterin binding domain ABTJ_01589 PF03453 MoeA N-terminal region (domain I and II) ABTJ_01589 PF00994 Probable molybdopterin binding domain ABTJ_01589 PF03454 MoeA C-terminal region (domain IV) ABTJ_01590 PF01638 HxlR-like helix-turn-helix ABTJ_01591 PF00392 Bacterial regulatory proteins, gntR family ABTJ_01591 PF00155 Aminotransferase class I and II ABTJ_01592 PF00892 EamA-like transporter family ABTJ_01596 PF02635 DsrE/DsrF-like family ABTJ_01597 PF16363 GDP-mannose 4,6 dehydratase ABTJ_01598 PF00206 Lyase ABTJ_01598 PF10415 Fumarase C C-terminus ABTJ_01603 PF01266 FAD dependent oxidoreductase ABTJ_01605 PF02542 YgbB family ABTJ_01607 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABTJ_01607 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABTJ_01608 PF00440 Bacterial regulatory proteins, tetR family ABTJ_01609 PF00158 Sigma-54 interaction domain ABTJ_01609 PF02954 Bacterial regulatory protein, Fis family ABTJ_01609 PF00072 Response regulator receiver domain ABTJ_01610 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_01610 PF00989 PAS fold ABTJ_01611 PF04055 Radical SAM superfamily ABTJ_01611 PF18693 TRAM domain ABTJ_01611 PF00919 Uncharacterized protein family UPF0004 ABTJ_01612 PF00696 Amino acid kinase family ABTJ_01613 PF01765 Ribosome recycling factor ABTJ_01614 PF01255 Putative undecaprenyl diphosphate synthase ABTJ_01616 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABTJ_01616 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABTJ_01616 PF13288 DXP reductoisomerase C-terminal domain ABTJ_01617 PF17820 PDZ domain ABTJ_01617 PF02163 Peptidase family M50 ABTJ_01617 PF13180 PDZ domain ABTJ_01618 PF07244 Surface antigen variable number repeat ABTJ_01618 PF01103 Surface antigen ABTJ_01620 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABTJ_01620 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_01621 PF07977 FabA-like domain ABTJ_01622 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABTJ_01622 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_01625 PF02631 RecX family ABTJ_01626 PF00154 recA bacterial DNA recombination protein ABTJ_01627 PF01479 S4 domain ABTJ_01628 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_01633 PF01037 Lrp/AsnC ligand binding domain ABTJ_01634 PF00266 Aminotransferase class-V ABTJ_01635 PF00324 Amino acid permease ABTJ_01637 PF00082 Subtilase family ABTJ_01637 PF05922 Peptidase inhibitor I9 ABTJ_01638 PF00916 Sulfate permease family ABTJ_01638 PF01740 STAS domain ABTJ_01639 PF02586 SOS response associated peptidase (SRAP) ABTJ_01640 PF07995 Glucose / Sorbosone dehydrogenase ABTJ_01642 PF03707 Bacterial signalling protein N terminal repeat ABTJ_01642 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_01642 PF00563 EAL domain ABTJ_01647 PF02378 Phosphotransferase system, EIIC ABTJ_01647 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABTJ_01648 PF00294 pfkB family carbohydrate kinase ABTJ_01649 PF00391 PEP-utilising enzyme, mobile domain ABTJ_01649 PF02896 PEP-utilising enzyme, TIM barrel domain ABTJ_01649 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABTJ_01649 PF00381 PTS HPr component phosphorylation site ABTJ_01649 PF05524 PEP-utilising enzyme, N-terminal ABTJ_01654 PF05525 Branched-chain amino acid transport protein ABTJ_01655 PF00557 Metallopeptidase family M24 ABTJ_01656 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01656 PF03466 LysR substrate binding domain ABTJ_01658 PF00462 Glutaredoxin ABTJ_01659 PF00202 Aminotransferase class-III ABTJ_01660 PF00571 CBS domain ABTJ_01660 PF00478 IMP dehydrogenase / GMP reductase domain ABTJ_01665 PF02881 SRP54-type protein, helical bundle domain ABTJ_01665 PF00448 SRP54-type protein, GTPase domain ABTJ_01667 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABTJ_01670 PF08173 Membrane bound YbgT-like protein ABTJ_01671 PF02322 Cytochrome bd terminal oxidase subunit II ABTJ_01672 PF01654 Cytochrome bd terminal oxidase subunit I ABTJ_01674 PF07290 Protein of unknown function (DUF1449) ABTJ_01676 PF00294 pfkB family carbohydrate kinase ABTJ_01677 PF00593 TonB dependent receptor ABTJ_01677 PF07715 TonB-dependent Receptor Plug Domain ABTJ_01678 PF08367 Peptidase M16C associated ABTJ_01678 PF00675 Insulinase (Peptidase family M16) ABTJ_01678 PF05193 Peptidase M16 inactive domain ABTJ_01679 PF02253 Phospholipase A1 ABTJ_01680 PF02386 Cation transport protein ABTJ_01681 PF02254 TrkA-N domain ABTJ_01681 PF02080 TrkA-C domain ABTJ_01682 PF00585 C-terminal regulatory domain of Threonine dehydratase ABTJ_01682 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_01683 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABTJ_01686 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABTJ_01686 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABTJ_01688 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABTJ_01689 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_01689 PF10431 C-terminal, D2-small domain, of ClpB protein ABTJ_01689 PF07724 AAA domain (Cdc48 subfamily) ABTJ_01689 PF17871 AAA lid domain ABTJ_01689 PF02861 Clp amino terminal domain, pathogenicity island component ABTJ_01690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABTJ_01691 PF00793 DAHP synthetase I family ABTJ_01694 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_01694 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01700 PF00117 Glutamine amidotransferase class-I ABTJ_01700 PF06418 CTP synthase N-terminus ABTJ_01701 PF00793 DAHP synthetase I family ABTJ_01702 PF00113 Enolase, C-terminal TIM barrel domain ABTJ_01702 PF03952 Enolase, N-terminal domain ABTJ_01703 PF04239 Protein of unknown function (DUF421) ABTJ_01704 PF04977 Septum formation initiator ABTJ_01705 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABTJ_01706 PF01144 Coenzyme A transferase ABTJ_01707 PF01144 Coenzyme A transferase ABTJ_01708 PF02803 Thiolase, C-terminal domain ABTJ_01708 PF00108 Thiolase, N-terminal domain ABTJ_01709 PF10397 Adenylosuccinate lyase C-terminus ABTJ_01709 PF00206 Lyase ABTJ_01710 PF00561 alpha/beta hydrolase fold ABTJ_01711 PF07690 Major Facilitator Superfamily ABTJ_01712 PF02627 Carboxymuconolactone decarboxylase family ABTJ_01713 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABTJ_01713 PF00775 Dioxygenase ABTJ_01714 PF00775 Dioxygenase ABTJ_01715 PF01487 Type I 3-dehydroquinase ABTJ_01716 PF05048 Periplasmic copper-binding protein (NosD) ABTJ_01717 PF04966 Carbohydrate-selective porin, OprB family ABTJ_01718 PF13360 PQQ-like domain ABTJ_01718 PF01011 PQQ enzyme repeat ABTJ_01720 PF04143 Sulphur transport ABTJ_01722 PF00753 Metallo-beta-lactamase superfamily ABTJ_01723 PF01614 Bacterial transcriptional regulator ABTJ_01723 PF09339 IclR helix-turn-helix domain ABTJ_01724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01724 PF03466 LysR substrate binding domain ABTJ_01725 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_01725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_01725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_01728 PF00106 short chain dehydrogenase ABTJ_01730 PF07690 Major Facilitator Superfamily ABTJ_01732 PF01425 Amidase ABTJ_01733 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_01736 PF00355 Rieske [2Fe-2S] domain ABTJ_01736 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABTJ_01739 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_01739 PF00175 Oxidoreductase NAD-binding domain ABTJ_01740 PF01613 Flavin reductase like domain ABTJ_01741 PF02311 AraC-like ligand binding domain ABTJ_01741 PF12833 Helix-turn-helix domain ABTJ_01742 PF02727 Copper amine oxidase, N2 domain ABTJ_01742 PF01179 Copper amine oxidase, enzyme domain ABTJ_01742 PF07833 Copper amine oxidase N-terminal domain ABTJ_01742 PF02728 Copper amine oxidase, N3 domain ABTJ_01744 PF00171 Aldehyde dehydrogenase family ABTJ_01745 PF01804 Penicillin amidase ABTJ_01746 PF12146 Serine aminopeptidase, S33 ABTJ_01747 PF02803 Thiolase, C-terminal domain ABTJ_01747 PF00108 Thiolase, N-terminal domain ABTJ_01748 PF01144 Coenzyme A transferase ABTJ_01749 PF01144 Coenzyme A transferase ABTJ_01750 PF04444 Catechol dioxygenase N terminus ABTJ_01750 PF00775 Dioxygenase ABTJ_01751 PF02426 Muconolactone delta-isomerase ABTJ_01752 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABTJ_01752 PF13378 Enolase C-terminal domain-like ABTJ_01753 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01753 PF03466 LysR substrate binding domain ABTJ_01755 PF00392 Bacterial regulatory proteins, gntR family ABTJ_01755 PF07729 FCD domain ABTJ_01756 PF00920 Dehydratase family ABTJ_01757 PF07690 Major Facilitator Superfamily ABTJ_01759 PF00171 Aldehyde dehydrogenase family ABTJ_01763 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_01763 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_01763 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_01765 PF00158 Sigma-54 interaction domain ABTJ_01765 PF06506 Propionate catabolism activator ABTJ_01765 PF02954 Bacterial regulatory protein, Fis family ABTJ_01766 PF13193 AMP-binding enzyme C-terminal domain ABTJ_01766 PF00501 AMP-binding enzyme ABTJ_01767 PF04341 Protein of unknown function, DUF485 ABTJ_01768 PF00474 Sodium:solute symporter family ABTJ_01769 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_01769 PF00107 Zinc-binding dehydrogenase ABTJ_01770 PF00171 Aldehyde dehydrogenase family ABTJ_01772 PF00561 alpha/beta hydrolase fold ABTJ_01773 PF00561 alpha/beta hydrolase fold ABTJ_01774 PF06628 Catalase-related immune-responsive ABTJ_01774 PF00199 Catalase ABTJ_01777 PF07859 alpha/beta hydrolase fold ABTJ_01778 PF01047 MarR family ABTJ_01779 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_01779 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01780 PF00106 short chain dehydrogenase ABTJ_01781 PF01872 RibD C-terminal domain ABTJ_01782 PF00376 MerR family regulatory protein ABTJ_01782 PF09278 MerR, DNA binding ABTJ_01784 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01786 PF12706 Beta-lactamase superfamily domain ABTJ_01787 PF08359 YsiA-like protein, C-terminal region ABTJ_01787 PF00440 Bacterial regulatory proteins, tetR family ABTJ_01789 PF00857 Isochorismatase family ABTJ_01790 PF03466 LysR substrate binding domain ABTJ_01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01791 PF07995 Glucose / Sorbosone dehydrogenase ABTJ_01792 PF00999 Sodium/hydrogen exchanger family ABTJ_01792 PF02254 TrkA-N domain ABTJ_01794 PF07687 Peptidase dimerisation domain ABTJ_01794 PF01546 Peptidase family M20/M25/M40 ABTJ_01796 PF08479 POTRA domain, ShlB-type ABTJ_01796 PF17287 POTRA domain ABTJ_01796 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABTJ_01797 PF13332 Hemagglutinin repeat ABTJ_01797 PF05860 haemagglutination activity domain ABTJ_01797 PF13018 Extended Signal Peptide of Type V secretion system ABTJ_01797 PF04829 Pre-toxin domain with VENN motif ABTJ_01800 PF07690 Major Facilitator Superfamily ABTJ_01801 PF04909 Amidohydrolase ABTJ_01804 PF08450 SMP-30/Gluconolactonase/LRE-like region ABTJ_01806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01806 PF03466 LysR substrate binding domain ABTJ_01810 PF07690 Major Facilitator Superfamily ABTJ_01811 PF01842 ACT domain ABTJ_01811 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABTJ_01811 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABTJ_01812 PF03737 Aldolase/RraA ABTJ_01816 PF00529 HlyD membrane-fusion protein of T1SS ABTJ_01816 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_01819 PF00171 Aldehyde dehydrogenase family ABTJ_01820 PF00920 Dehydratase family ABTJ_01822 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01822 PF03466 LysR substrate binding domain ABTJ_01825 PF07690 Major Facilitator Superfamily ABTJ_01826 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABTJ_01826 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABTJ_01827 PF12833 Helix-turn-helix domain ABTJ_01827 PF06719 AraC-type transcriptional regulator N-terminus ABTJ_01830 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_01830 PF00107 Zinc-binding dehydrogenase ABTJ_01833 PF00005 ABC transporter ABTJ_01837 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABTJ_01837 PF14572 Phosphoribosyl synthetase-associated domain ABTJ_01838 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABTJ_01853 PF00196 Bacterial regulatory proteins, luxR family ABTJ_01854 PF01425 Amidase ABTJ_01855 PF13533 Biotin-lipoyl like ABTJ_01856 PF07690 Major Facilitator Superfamily ABTJ_01861 PF01975 Survival protein SurE ABTJ_01863 PF04607 Region found in RelA / SpoT proteins ABTJ_01863 PF13291 ACT domain ABTJ_01863 PF02824 TGS domain ABTJ_01874 PF12146 Serine aminopeptidase, S33 ABTJ_01875 PF12833 Helix-turn-helix domain ABTJ_01875 PF02311 AraC-like ligand binding domain ABTJ_01877 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_01877 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_01877 PF00672 HAMP domain ABTJ_01877 PF16527 Two-component sensor protein CpxA, periplasmic domain ABTJ_01878 PF00486 Transcriptional regulatory protein, C terminal ABTJ_01878 PF00072 Response regulator receiver domain ABTJ_01879 PF00529 HlyD membrane-fusion protein of T1SS ABTJ_01879 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_01880 PF00873 AcrB/AcrD/AcrF family ABTJ_01881 PF02321 Outer membrane efflux protein ABTJ_01882 PF12146 Serine aminopeptidase, S33 ABTJ_01883 PF00743 Flavin-binding monooxygenase-like ABTJ_01884 PF01593 Flavin containing amine oxidoreductase ABTJ_01887 PF01266 FAD dependent oxidoreductase ABTJ_01891 PF16970 Type-1 fimbrial protein, A ABTJ_01894 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABTJ_01894 PF02753 Pili assembly chaperone PapD, C-terminal domain ABTJ_01895 PF13953 PapC C-terminal domain ABTJ_01895 PF13954 PapC N-terminal domain ABTJ_01895 PF00577 Outer membrane usher protein ABTJ_01896 PF00419 Fimbrial protein ABTJ_01898 PF00107 Zinc-binding dehydrogenase ABTJ_01898 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_01900 PF00199 Catalase ABTJ_01903 PF13091 PLD-like domain ABTJ_01907 PF01244 Membrane dipeptidase (Peptidase family M19) ABTJ_01908 PF13186 Iron-sulfur cluster-binding domain ABTJ_01908 PF04055 Radical SAM superfamily ABTJ_01909 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABTJ_01910 PF03070 TENA/THI-4/PQQC family ABTJ_01911 PF12706 Beta-lactamase superfamily domain ABTJ_01912 PF17941 Polyphosphate kinase C-terminal domain 1 ABTJ_01912 PF02503 Polyphosphate kinase middle domain ABTJ_01912 PF13089 Polyphosphate kinase N-terminal domain ABTJ_01912 PF13090 Polyphosphate kinase C-terminal domain 2 ABTJ_01913 PF00149 Calcineurin-like phosphoesterase ABTJ_01915 PF00857 Isochorismatase family ABTJ_01915 PF00550 Phosphopantetheine attachment site ABTJ_01916 PF00106 short chain dehydrogenase ABTJ_01917 PF03459 TOBE domain ABTJ_01917 PF00005 ABC transporter ABTJ_01918 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01920 PF03459 TOBE domain ABTJ_01921 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABTJ_01921 PF00355 Rieske [2Fe-2S] domain ABTJ_01922 PF00866 Ring hydroxylating beta subunit ABTJ_01923 PF00970 Oxidoreductase FAD-binding domain ABTJ_01923 PF00175 Oxidoreductase NAD-binding domain ABTJ_01923 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_01924 PF14525 AraC-binding-like domain ABTJ_01924 PF12833 Helix-turn-helix domain ABTJ_01926 PF01613 Flavin reductase like domain ABTJ_01929 PF01738 Dienelactone hydrolase family ABTJ_01930 PF07690 Major Facilitator Superfamily ABTJ_01931 PF06719 AraC-type transcriptional regulator N-terminus ABTJ_01931 PF12833 Helix-turn-helix domain ABTJ_01937 PF03466 LysR substrate binding domain ABTJ_01937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01938 PF01144 Coenzyme A transferase ABTJ_01939 PF01144 Coenzyme A transferase ABTJ_01940 PF02667 Short chain fatty acid transporter ABTJ_01941 PF00108 Thiolase, N-terminal domain ABTJ_01941 PF02803 Thiolase, C-terminal domain ABTJ_01942 PF03466 LysR substrate binding domain ABTJ_01942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01943 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_01943 PF03466 LysR substrate binding domain ABTJ_01946 PF10415 Fumarase C C-terminus ABTJ_01946 PF00206 Lyase ABTJ_01947 PF00593 TonB dependent receptor ABTJ_01947 PF07715 TonB-dependent Receptor Plug Domain ABTJ_01948 PF00083 Sugar (and other) transporter ABTJ_01951 PF00005 ABC transporter ABTJ_01952 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_01953 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABTJ_01958 PF02525 Flavodoxin-like fold ABTJ_01959 PF01638 HxlR-like helix-turn-helix ABTJ_01960 PF12833 Helix-turn-helix domain ABTJ_01960 PF06445 GyrI-like small molecule binding domain ABTJ_01963 PF01925 Sulfite exporter TauE/SafE ABTJ_01964 PF04273 Putative phosphatase (DUF442) ABTJ_01964 PF00753 Metallo-beta-lactamase superfamily ABTJ_01965 PF00753 Metallo-beta-lactamase superfamily ABTJ_01965 PF04273 Putative phosphatase (DUF442) ABTJ_01966 PF00072 Response regulator receiver domain ABTJ_01966 PF00158 Sigma-54 interaction domain ABTJ_01966 PF02954 Bacterial regulatory protein, Fis family ABTJ_01967 PF01062 Bestrophin, RFP-TM, chloride channel ABTJ_01968 PF00107 Zinc-binding dehydrogenase ABTJ_01968 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_01969 PF00106 short chain dehydrogenase ABTJ_01970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABTJ_01970 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_01971 PF02817 e3 binding domain ABTJ_01971 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABTJ_01971 PF00364 Biotin-requiring enzyme ABTJ_01972 PF02780 Transketolase, C-terminal domain ABTJ_01972 PF02779 Transketolase, pyrimidine binding domain ABTJ_01973 PF00676 Dehydrogenase E1 component ABTJ_01974 PF04055 Radical SAM superfamily ABTJ_01977 PF08448 PAS fold ABTJ_01977 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_01978 PF01264 Chorismate synthase ABTJ_01979 PF05175 Methyltransferase small domain ABTJ_01980 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_01982 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_01982 PF17862 AAA+ lid domain ABTJ_01982 PF01434 Peptidase family M41 ABTJ_01984 PF05166 YcgL domain ABTJ_01988 PF01612 3'-5' exonuclease ABTJ_01988 PF00570 HRDC domain ABTJ_01989 PF02132 RecR protein ABTJ_01989 PF13662 Toprim domain ABTJ_01990 PF02575 YbaB/EbfC DNA-binding family ABTJ_01992 PF01053 Cys/Met metabolism PLP-dependent enzyme ABTJ_01993 PF00561 alpha/beta hydrolase fold ABTJ_01994 PF08241 Methyltransferase domain ABTJ_02000 PF01230 HIT domain ABTJ_02007 PF00005 ABC transporter ABTJ_02008 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_02010 PF02684 Lipid-A-disaccharide synthetase ABTJ_02011 PF00593 TonB dependent receptor ABTJ_02011 PF07715 TonB-dependent Receptor Plug Domain ABTJ_02015 PF01925 Sulfite exporter TauE/SafE ABTJ_02016 PF00793 DAHP synthetase I family ABTJ_02017 PF02654 Cobalamin-5-phosphate synthase ABTJ_02020 PF02277 Phosphoribosyltransferase ABTJ_02021 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABTJ_02023 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_02028 PF00593 TonB dependent receptor ABTJ_02028 PF07715 TonB-dependent Receptor Plug Domain ABTJ_02031 PF04183 IucA / IucC family ABTJ_02031 PF06276 Ferric iron reductase FhuF-like transporter ABTJ_02032 PF06276 Ferric iron reductase FhuF-like transporter ABTJ_02032 PF04183 IucA / IucC family ABTJ_02033 PF07690 Major Facilitator Superfamily ABTJ_02034 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABTJ_02035 PF04183 IucA / IucC family ABTJ_02035 PF06276 Ferric iron reductase FhuF-like transporter ABTJ_02036 PF04073 Aminoacyl-tRNA editing domain ABTJ_02038 PF03109 ABC1 family ABTJ_02039 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02039 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02039 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02040 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02041 PF00487 Fatty acid desaturase ABTJ_02042 PF12833 Helix-turn-helix domain ABTJ_02042 PF12852 Cupin ABTJ_02043 PF09312 SurA N-terminal domain ABTJ_02043 PF00639 PPIC-type PPIASE domain ABTJ_02044 PF00216 Bacterial DNA-binding protein ABTJ_02047 PF02082 Transcriptional regulator ABTJ_02048 PF00266 Aminotransferase class-V ABTJ_02049 PF01592 NifU-like N terminal domain ABTJ_02050 PF01521 Iron-sulphur cluster biosynthesis ABTJ_02051 PF00226 DnaJ domain ABTJ_02051 PF07743 HSCB C-terminal oligomerisation domain ABTJ_02052 PF00012 Hsp70 protein ABTJ_02053 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_02054 PF00211 Adenylate and Guanylate cyclase catalytic domain ABTJ_02056 PF17757 UvrB interaction domain ABTJ_02056 PF03461 TRCF domain ABTJ_02056 PF00270 DEAD/DEAH box helicase ABTJ_02056 PF00271 Helicase conserved C-terminal domain ABTJ_02056 PF02559 CarD-like/TRCF domain ABTJ_02060 PF03737 Aldolase/RraA ABTJ_02061 PF13460 NAD(P)H-binding ABTJ_02062 PF01649 Ribosomal protein S20 ABTJ_02064 PF00459 Inositol monophosphatase family ABTJ_02067 PF00005 ABC transporter ABTJ_02067 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABTJ_02068 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02069 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02070 PF01432 Peptidase family M3 ABTJ_02074 PF07715 TonB-dependent Receptor Plug Domain ABTJ_02074 PF00593 TonB dependent receptor ABTJ_02076 PF01618 MotA/TolQ/ExbB proton channel family ABTJ_02077 PF02472 Biopolymer transport protein ExbD/TolR ABTJ_02078 PF02472 Biopolymer transport protein ExbD/TolR ABTJ_02080 PF01274 Malate synthase ABTJ_02081 PF03969 AFG1-like ATPase ABTJ_02083 PF00743 Flavin-binding monooxygenase-like ABTJ_02085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABTJ_02087 PF00216 Bacterial DNA-binding protein ABTJ_02088 PF00575 S1 RNA binding domain ABTJ_02089 PF02224 Cytidylate kinase ABTJ_02091 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABTJ_02093 PF03167 Uracil DNA glycosylase superfamily ABTJ_02095 PF03934 Type II secretion system (T2SS), protein K ABTJ_02098 PF02501 Type II secretion system (T2SS), protein I ABTJ_02098 PF07963 Prokaryotic N-terminal methylation motif ABTJ_02101 PF01026 TatD related DNase ABTJ_02103 PF09115 DNA polymerase III, delta subunit, C terminal ABTJ_02104 PF02348 Cytidylyltransferase ABTJ_02105 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABTJ_02106 PF00005 ABC transporter ABTJ_02106 PF00664 ABC transporter transmembrane region ABTJ_02108 PF01618 MotA/TolQ/ExbB proton channel family ABTJ_02109 PF17762 HTH domain found in ParB protein ABTJ_02109 PF02195 ParB-like nuclease domain ABTJ_02110 PF13614 AAA domain ABTJ_02111 PF02527 rRNA small subunit methyltransferase G ABTJ_02112 PF00483 Nucleotidyl transferase ABTJ_02113 PF01636 Phosphotransferase enzyme family ABTJ_02114 PF03968 OstA-like protein ABTJ_02114 PF04453 LPS transport system D ABTJ_02115 PF00639 PPIC-type PPIASE domain ABTJ_02115 PF09312 SurA N-terminal domain ABTJ_02116 PF01116 Fructose-bisphosphate aldolase class-II ABTJ_02118 PF00162 Phosphoglycerate kinase ABTJ_02120 PF02545 Maf-like protein ABTJ_02121 PF08007 Cupin superfamily protein ABTJ_02124 PF00375 Sodium:dicarboxylate symporter family ABTJ_02125 PF06912 Protein of unknown function (DUF1275) ABTJ_02126 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABTJ_02127 PF00005 ABC transporter ABTJ_02127 PF00664 ABC transporter transmembrane region ABTJ_02129 PF12833 Helix-turn-helix domain ABTJ_02129 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABTJ_02130 PF01597 Glycine cleavage H-protein ABTJ_02131 PF02146 Sir2 family ABTJ_02132 PF00474 Sodium:solute symporter family ABTJ_02133 PF01037 Lrp/AsnC ligand binding domain ABTJ_02134 PF00171 Aldehyde dehydrogenase family ABTJ_02134 PF01619 Proline dehydrogenase ABTJ_02134 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABTJ_02134 PF14850 DNA-binding domain of Proline dehydrogenase ABTJ_02135 PF04229 GrpB protein ABTJ_02136 PF05958 tRNA (Uracil-5-)-methyltransferase ABTJ_02138 PF09992 Phosphodiester glycosidase ABTJ_02140 PF04264 YceI-like domain ABTJ_02142 PF00456 Transketolase, thiamine diphosphate binding domain ABTJ_02142 PF02780 Transketolase, C-terminal domain ABTJ_02142 PF02779 Transketolase, pyrimidine binding domain ABTJ_02143 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABTJ_02143 PF02772 S-adenosylmethionine synthetase, central domain ABTJ_02143 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABTJ_02147 PF00905 Penicillin binding protein transpeptidase domain ABTJ_02150 PF02075 Crossover junction endodeoxyribonuclease RuvC ABTJ_02151 PF01256 Carbohydrate kinase ABTJ_02151 PF03853 YjeF-related protein N-terminus ABTJ_02152 PF08331 Domain of unknown function (DUF1730) ABTJ_02153 PF04055 Radical SAM superfamily ABTJ_02153 PF06968 Biotin and Thiamin Synthesis associated domain ABTJ_02156 PF16970 Type-1 fimbrial protein, A ABTJ_02157 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABTJ_02157 PF02753 Pili assembly chaperone PapD, C-terminal domain ABTJ_02158 PF13954 PapC N-terminal domain ABTJ_02158 PF00577 Outer membrane usher protein ABTJ_02158 PF13953 PapC C-terminal domain ABTJ_02162 PF00892 EamA-like transporter family ABTJ_02164 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABTJ_02166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02166 PF03466 LysR substrate binding domain ABTJ_02171 PF00440 Bacterial regulatory proteins, tetR family ABTJ_02173 PF01709 Transcriptional regulator ABTJ_02174 PF01037 Lrp/AsnC ligand binding domain ABTJ_02176 PF00005 ABC transporter ABTJ_02177 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02178 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02181 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02181 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02183 PF00296 Luciferase-like monooxygenase ABTJ_02184 PF03180 NLPA lipoprotein ABTJ_02185 PF03180 NLPA lipoprotein ABTJ_02186 PF09383 NIL domain ABTJ_02186 PF00005 ABC transporter ABTJ_02187 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02188 PF01926 50S ribosome-binding GTPase ABTJ_02188 PF06071 Protein of unknown function (DUF933) ABTJ_02193 PF03591 AzlC protein ABTJ_02194 PF05437 Branched-chain amino acid transport protein (AzlD) ABTJ_02196 PF02222 ATP-grasp domain ABTJ_02197 PF08335 GlnD PII-uridylyltransferase ABTJ_02197 PF01966 HD domain ABTJ_02197 PF01909 Nucleotidyltransferase domain ABTJ_02198 PF00155 Aminotransferase class I and II ABTJ_02200 PF12833 Helix-turn-helix domain ABTJ_02200 PF12852 Cupin ABTJ_02201 PF00255 Glutathione peroxidase ABTJ_02202 PF01641 SelR domain ABTJ_02203 PF00155 Aminotransferase class I and II ABTJ_02204 PF00375 Sodium:dicarboxylate symporter family ABTJ_02205 PF17763 Glutaminase/Asparaginase C-terminal domain ABTJ_02205 PF00710 Asparaginase, N-terminal ABTJ_02206 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABTJ_02206 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABTJ_02206 PF14579 Helix-hairpin-helix motif ABTJ_02206 PF01336 OB-fold nucleic acid binding domain ABTJ_02206 PF02811 PHP domain ABTJ_02207 PF00588 SpoU rRNA Methylase family ABTJ_02208 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_02211 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02211 PF13192 Thioredoxin domain ABTJ_02214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02214 PF03466 LysR substrate binding domain ABTJ_02215 PF01758 Sodium Bile acid symporter family ABTJ_02216 PF01022 Bacterial regulatory protein, arsR family ABTJ_02217 PF03960 ArsC family ABTJ_02222 PF01979 Amidohydrolase family ABTJ_02222 PF13382 Adenine deaminase C-terminal domain ABTJ_02224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02224 PF03466 LysR substrate binding domain ABTJ_02226 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABTJ_02227 PF01177 Asp/Glu/Hydantoin racemase ABTJ_02228 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABTJ_02229 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02230 PF00005 ABC transporter ABTJ_02231 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABTJ_02234 PF00083 Sugar (and other) transporter ABTJ_02235 PF00296 Luciferase-like monooxygenase ABTJ_02236 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02236 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02236 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02238 PF01654 Cytochrome bd terminal oxidase subunit I ABTJ_02239 PF02322 Cytochrome bd terminal oxidase subunit II ABTJ_02241 PF00392 Bacterial regulatory proteins, gntR family ABTJ_02241 PF00155 Aminotransferase class I and II ABTJ_02242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02242 PF03466 LysR substrate binding domain ABTJ_02245 PF00698 Acyl transferase domain ABTJ_02246 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABTJ_02248 PF01039 Carboxyl transferase domain ABTJ_02249 PF06857 Malonate decarboxylase delta subunit (MdcD) ABTJ_02250 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABTJ_02251 PF16957 Malonate decarboxylase, alpha subunit, transporter ABTJ_02252 PF07690 Major Facilitator Superfamily ABTJ_02255 PF00155 Aminotransferase class I and II ABTJ_02255 PF00392 Bacterial regulatory proteins, gntR family ABTJ_02256 PF04172 LrgB-like family ABTJ_02257 PF03788 LrgA family ABTJ_02258 PF03466 LysR substrate binding domain ABTJ_02258 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02259 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_02259 PF14834 Glutathione S-transferase, C-terminal domain ABTJ_02260 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_02261 PF03466 LysR substrate binding domain ABTJ_02261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02263 PF00581 Rhodanese-like domain ABTJ_02264 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_02266 PF00266 Aminotransferase class-V ABTJ_02267 PF01810 LysE type translocator ABTJ_02268 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02268 PF03466 LysR substrate binding domain ABTJ_02269 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABTJ_02270 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABTJ_02271 PF00005 ABC transporter ABTJ_02272 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02273 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02275 PF00072 Response regulator receiver domain ABTJ_02276 PF09308 LuxQ, periplasmic ABTJ_02276 PF00072 Response regulator receiver domain ABTJ_02276 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_02276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_02278 PF13404 AsnC-type helix-turn-helix domain ABTJ_02278 PF01037 Lrp/AsnC ligand binding domain ABTJ_02280 PF00717 Peptidase S24-like ABTJ_02285 PF18011 C-terminal domain found in long catalases ABTJ_02285 PF00199 Catalase ABTJ_02285 PF06628 Catalase-related immune-responsive ABTJ_02287 PF00994 Probable molybdopterin binding domain ABTJ_02287 PF18146 Damage-inducible protein CinA KH domain ABTJ_02287 PF02464 Competence-damaged protein ABTJ_02295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02295 PF03466 LysR substrate binding domain ABTJ_02299 PF00501 AMP-binding enzyme ABTJ_02299 PF13193 AMP-binding enzyme C-terminal domain ABTJ_02300 PF00440 Bacterial regulatory proteins, tetR family ABTJ_02301 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02301 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02301 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02302 PF01039 Carboxyl transferase domain ABTJ_02303 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_02304 PF00364 Biotin-requiring enzyme ABTJ_02304 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABTJ_02304 PF00289 Biotin carboxylase, N-terminal domain ABTJ_02304 PF02785 Biotin carboxylase C-terminal domain ABTJ_02305 PF00682 HMGL-like ABTJ_02306 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02306 PF03466 LysR substrate binding domain ABTJ_02309 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABTJ_02309 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02309 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02309 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02311 PF07690 Major Facilitator Superfamily ABTJ_02313 PF01144 Coenzyme A transferase ABTJ_02314 PF01144 Coenzyme A transferase ABTJ_02315 PF07690 Major Facilitator Superfamily ABTJ_02316 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02316 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02316 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02317 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_02319 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABTJ_02319 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABTJ_02319 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABTJ_02320 PF02803 Thiolase, C-terminal domain ABTJ_02320 PF00108 Thiolase, N-terminal domain ABTJ_02321 PF09339 IclR helix-turn-helix domain ABTJ_02322 PF07690 Major Facilitator Superfamily ABTJ_02323 PF03060 Nitronate monooxygenase ABTJ_02324 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_02325 PF09339 IclR helix-turn-helix domain ABTJ_02326 PF02515 CoA-transferase family III ABTJ_02327 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_02327 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_02327 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_02328 PF07690 Major Facilitator Superfamily ABTJ_02329 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_02330 PF00266 Aminotransferase class-V ABTJ_02331 PF01266 FAD dependent oxidoreductase ABTJ_02332 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02333 PF00005 ABC transporter ABTJ_02333 PF08402 TOBE domain ABTJ_02335 PF07702 UTRA domain ABTJ_02335 PF00392 Bacterial regulatory proteins, gntR family ABTJ_02336 PF01494 FAD binding domain ABTJ_02337 PF09339 IclR helix-turn-helix domain ABTJ_02337 PF01614 Bacterial transcriptional regulator ABTJ_02338 PF02525 Flavodoxin-like fold ABTJ_02339 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02339 PF03466 LysR substrate binding domain ABTJ_02340 PF02627 Carboxymuconolactone decarboxylase family ABTJ_02341 PF00171 Aldehyde dehydrogenase family ABTJ_02343 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABTJ_02344 PF00171 Aldehyde dehydrogenase family ABTJ_02345 PF00296 Luciferase-like monooxygenase ABTJ_02346 PF01613 Flavin reductase like domain ABTJ_02347 PF12697 Alpha/beta hydrolase family ABTJ_02351 PF01292 Prokaryotic cytochrome b561 ABTJ_02352 PF00199 Catalase ABTJ_02359 PF03061 Thioesterase superfamily ABTJ_02360 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_02361 PF07848 PaaX-like protein ABTJ_02361 PF08223 PaaX-like protein C-terminal domain ABTJ_02362 PF14535 AMP-binding enzyme C-terminal domain ABTJ_02362 PF00501 AMP-binding enzyme ABTJ_02363 PF02803 Thiolase, C-terminal domain ABTJ_02363 PF00108 Thiolase, N-terminal domain ABTJ_02364 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABTJ_02364 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABTJ_02364 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABTJ_02365 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_02366 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_02367 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_02367 PF00970 Oxidoreductase FAD-binding domain ABTJ_02367 PF00175 Oxidoreductase NAD-binding domain ABTJ_02368 PF01883 Iron-sulfur cluster assembly protein ABTJ_02369 PF05138 Phenylacetic acid catabolic protein ABTJ_02370 PF06243 Phenylacetic acid degradation B ABTJ_02371 PF05138 Phenylacetic acid catabolic protein ABTJ_02372 PF01575 MaoC like domain ABTJ_02372 PF00171 Aldehyde dehydrogenase family ABTJ_02373 PF03313 Serine dehydratase alpha chain ABTJ_02373 PF03315 Serine dehydratase beta chain ABTJ_02374 PF13520 Amino acid permease ABTJ_02375 PF00171 Aldehyde dehydrogenase family ABTJ_02376 PF00083 Sugar (and other) transporter ABTJ_02378 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02378 PF04324 BFD-like [2Fe-2S] binding domain ABTJ_02380 PF01266 FAD dependent oxidoreductase ABTJ_02381 PF05544 Proline racemase ABTJ_02382 PF00392 Bacterial regulatory proteins, gntR family ABTJ_02384 PF00701 Dihydrodipicolinate synthetase family ABTJ_02387 PF09278 MerR, DNA binding ABTJ_02387 PF00376 MerR family regulatory protein ABTJ_02391 PF02677 Epoxyqueuosine reductase QueH ABTJ_02394 PF07690 Major Facilitator Superfamily ABTJ_02395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABTJ_02397 PF03466 LysR substrate binding domain ABTJ_02397 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02403 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_02403 PF07724 AAA domain (Cdc48 subfamily) ABTJ_02403 PF17871 AAA lid domain ABTJ_02403 PF10431 C-terminal, D2-small domain, of ClpB protein ABTJ_02405 PF00691 OmpA family ABTJ_02405 PF01389 OmpA-like transmembrane domain ABTJ_02418 PF00005 ABC transporter ABTJ_02419 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABTJ_02420 PF01425 Amidase ABTJ_02421 PF01402 Ribbon-helix-helix protein, copG family ABTJ_02421 PF08753 NikR C terminal nickel binding domain ABTJ_02424 PF01638 HxlR-like helix-turn-helix ABTJ_02425 PF02525 Flavodoxin-like fold ABTJ_02426 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABTJ_02426 PF00289 Biotin carboxylase, N-terminal domain ABTJ_02426 PF02785 Biotin carboxylase C-terminal domain ABTJ_02430 PF00107 Zinc-binding dehydrogenase ABTJ_02430 PF13823 Alcohol dehydrogenase GroES-associated ABTJ_02430 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_02432 PF00440 Bacterial regulatory proteins, tetR family ABTJ_02437 PF00654 Voltage gated chloride channel ABTJ_02438 PF02785 Biotin carboxylase C-terminal domain ABTJ_02438 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABTJ_02438 PF00289 Biotin carboxylase, N-terminal domain ABTJ_02438 PF00364 Biotin-requiring enzyme ABTJ_02441 PF07286 Protein of unknown function (DUF1445) ABTJ_02442 PF03746 LamB/YcsF family ABTJ_02443 PF01566 Natural resistance-associated macrophage protein ABTJ_02444 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02444 PF03466 LysR substrate binding domain ABTJ_02447 PF03527 RHS protein ABTJ_02447 PF14220 Domain of unknown function (DUF4329) ABTJ_02447 PF05593 RHS Repeat ABTJ_02448 PF04717 Type VI secretion system, phage-baseplate injector ABTJ_02448 PF16671 Actin cross-linking domain ABTJ_02450 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_02453 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABTJ_02453 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABTJ_02457 PF07690 Major Facilitator Superfamily ABTJ_02461 PF03279 Bacterial lipid A biosynthesis acyltransferase ABTJ_02462 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_02462 PF00563 EAL domain ABTJ_02462 PF03707 Bacterial signalling protein N terminal repeat ABTJ_02463 PF00892 EamA-like transporter family ABTJ_02464 PF01037 Lrp/AsnC ligand binding domain ABTJ_02465 PF00488 MutS domain V ABTJ_02465 PF05188 MutS domain II ABTJ_02465 PF01624 MutS domain I ABTJ_02465 PF05190 MutS family domain IV ABTJ_02465 PF05192 MutS domain III ABTJ_02467 PF11953 Domain of unknown function (DUF3470) ABTJ_02467 PF00037 4Fe-4S binding domain ABTJ_02469 PF01596 O-methyltransferase ABTJ_02471 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_02472 PF01205 Uncharacterized protein family UPF0029 ABTJ_02474 PF03412 Peptidase C39 family ABTJ_02474 PF00005 ABC transporter ABTJ_02474 PF00664 ABC transporter transmembrane region ABTJ_02475 PF02321 Outer membrane efflux protein ABTJ_02476 PF00005 ABC transporter ABTJ_02476 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABTJ_02477 PF03968 OstA-like protein ABTJ_02480 PF00571 CBS domain ABTJ_02480 PF01380 SIS domain ABTJ_02481 PF09190 DALR domain ABTJ_02481 PF01406 tRNA synthetases class I (C) catalytic domain ABTJ_02487 PF01638 HxlR-like helix-turn-helix ABTJ_02488 PF07690 Major Facilitator Superfamily ABTJ_02493 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABTJ_02493 PF03807 NADP oxidoreductase coenzyme F420-dependent ABTJ_02495 PF00313 'Cold-shock' DNA-binding domain ABTJ_02496 PF01810 LysE type translocator ABTJ_02503 PF02601 Exonuclease VII, large subunit ABTJ_02503 PF13742 OB-fold nucleic acid binding domain ABTJ_02510 PF00376 MerR family regulatory protein ABTJ_02510 PF09278 MerR, DNA binding ABTJ_02511 PF00403 Heavy-metal-associated domain ABTJ_02513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02513 PF03466 LysR substrate binding domain ABTJ_02514 PF00355 Rieske [2Fe-2S] domain ABTJ_02514 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABTJ_02515 PF00866 Ring hydroxylating beta subunit ABTJ_02516 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_02516 PF00175 Oxidoreductase NAD-binding domain ABTJ_02516 PF00970 Oxidoreductase FAD-binding domain ABTJ_02517 PF00106 short chain dehydrogenase ABTJ_02518 PF03594 Benzoate membrane transport protein ABTJ_02519 PF07690 Major Facilitator Superfamily ABTJ_02521 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABTJ_02521 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABTJ_02522 PF00271 Helicase conserved C-terminal domain ABTJ_02522 PF04408 Helicase associated domain (HA2) ABTJ_02522 PF11898 Domain of unknown function (DUF3418) ABTJ_02522 PF00270 DEAD/DEAH box helicase ABTJ_02522 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABTJ_02523 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABTJ_02523 PF00578 AhpC/TSA family ABTJ_02527 PF13192 Thioredoxin domain ABTJ_02527 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02529 PF00043 Glutathione S-transferase, C-terminal domain ABTJ_02529 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_02531 PF02390 Putative methyltransferase ABTJ_02532 PF00043 Glutathione S-transferase, C-terminal domain ABTJ_02532 PF13417 Glutathione S-transferase, N-terminal domain ABTJ_02534 PF13488 Glycine zipper ABTJ_02534 PF00691 OmpA family ABTJ_02535 PF01979 Amidohydrolase family ABTJ_02536 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABTJ_02536 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABTJ_02538 PF10672 S-adenosylmethionine-dependent methyltransferase ABTJ_02538 PF02926 THUMP domain ABTJ_02538 PF01170 Putative RNA methylase family UPF0020 ABTJ_02541 PF17871 AAA lid domain ABTJ_02541 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_02541 PF02861 Clp amino terminal domain, pathogenicity island component ABTJ_02541 PF10431 C-terminal, D2-small domain, of ClpB protein ABTJ_02541 PF07724 AAA domain (Cdc48 subfamily) ABTJ_02544 PF02566 OsmC-like protein ABTJ_02545 PF00027 Cyclic nucleotide-binding domain ABTJ_02545 PF13545 Crp-like helix-turn-helix domain ABTJ_02548 PF00248 Aldo/keto reductase family ABTJ_02551 PF00709 Adenylosuccinate synthetase ABTJ_02552 PF13393 Histidyl-tRNA synthetase ABTJ_02553 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABTJ_02553 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABTJ_02554 PF01411 tRNA synthetases class II (A) ABTJ_02554 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABTJ_02554 PF02272 DHHA1 domain ABTJ_02555 PF13840 ACT domain ABTJ_02555 PF01842 ACT domain ABTJ_02555 PF00696 Amino acid kinase family ABTJ_02556 PF02599 Global regulator protein family ABTJ_02557 PF01351 Ribonuclease HII ABTJ_02559 PF01292 Prokaryotic cytochrome b561 ABTJ_02560 PF00962 Adenosine/AMP deaminase ABTJ_02561 PF00860 Permease family ABTJ_02563 PF00743 Flavin-binding monooxygenase-like ABTJ_02564 PF00106 short chain dehydrogenase ABTJ_02566 PF17954 Quercetinase C-terminal cupin domain ABTJ_02566 PF02678 Pirin ABTJ_02567 PF17932 Tetracyclin repressor-like, C-terminal domain ABTJ_02567 PF00440 Bacterial regulatory proteins, tetR family ABTJ_02569 PF00106 short chain dehydrogenase ABTJ_02570 PF00743 Flavin-binding monooxygenase-like ABTJ_02571 PF13610 DDE domain ABTJ_02573 PF00239 Resolvase, N terminal domain ABTJ_02573 PF02796 Helix-turn-helix domain of resolvase ABTJ_02574 PF00563 EAL domain ABTJ_02574 PF11809 Domain of unknown function (DUF3330) ABTJ_02575 PF00589 Phage integrase family ABTJ_02575 PF13495 Phage integrase, N-terminal SAM-like domain ABTJ_02576 PF00583 Acetyltransferase (GNAT) family ABTJ_02579 PF01909 Nucleotidyltransferase domain ABTJ_02579 PF13427 Domain of unknown function (DUF4111) ABTJ_02580 PF00893 Small Multidrug Resistance protein ABTJ_02581 PF00809 Pterin binding enzyme ABTJ_02584 PF13610 DDE domain ABTJ_02585 PF00239 Resolvase, N terminal domain ABTJ_02585 PF02796 Helix-turn-helix domain of resolvase ABTJ_02586 PF13700 Domain of unknown function (DUF4158) ABTJ_02586 PF01526 Tn3 transposase DDE domain ABTJ_02587 PF13610 DDE domain ABTJ_02588 PF00324 Amino acid permease ABTJ_02589 PF04958 Arginine N-succinyltransferase beta subunit ABTJ_02590 PF00202 Aminotransferase class-III ABTJ_02592 PF00171 Aldehyde dehydrogenase family ABTJ_02594 PF07729 FCD domain ABTJ_02594 PF00392 Bacterial regulatory proteins, gntR family ABTJ_02596 PF00324 Amino acid permease ABTJ_02597 PF01266 FAD dependent oxidoreductase ABTJ_02598 PF00324 Amino acid permease ABTJ_02606 PF05593 RHS Repeat ABTJ_02606 PF03527 RHS protein ABTJ_02607 PF04717 Type VI secretion system, phage-baseplate injector ABTJ_02607 PF16671 Actin cross-linking domain ABTJ_02610 PF03180 NLPA lipoprotein ABTJ_02611 PF05987 Bacterial protein of unknown function (DUF898) ABTJ_02614 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02614 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_02615 PF00764 Arginosuccinate synthase ABTJ_02616 PF01590 GAF domain ABTJ_02616 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_02616 PF00563 EAL domain ABTJ_02616 PF00360 Phytochrome region ABTJ_02617 PF01979 Amidohydrolase family ABTJ_02618 PF00929 Exonuclease ABTJ_02620 PF07715 TonB-dependent Receptor Plug Domain ABTJ_02620 PF00593 TonB dependent receptor ABTJ_02621 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02621 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_02622 PF00005 ABC transporter ABTJ_02622 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABTJ_02623 PF12911 N-terminal TM domain of oligopeptide transport permease C ABTJ_02623 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02624 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_02625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABTJ_02626 PF01464 Transglycosylase SLT domain ABTJ_02626 PF01476 LysM domain ABTJ_02626 PF01476 LysM domain ABTJ_02626 PF01464 Transglycosylase SLT domain ABTJ_02627 PF00929 Exonuclease ABTJ_02629 PF09297 NADH pyrophosphatase zinc ribbon domain ABTJ_02629 PF00293 NUDIX domain ABTJ_02631 PF04972 BON domain ABTJ_02632 PF02021 Uncharacterised protein family UPF0102 ABTJ_02633 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABTJ_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02635 PF03466 LysR substrate binding domain ABTJ_02636 PF01810 LysE type translocator ABTJ_02638 PF13411 MerR HTH family regulatory protein ABTJ_02640 PF01494 FAD binding domain ABTJ_02641 PF01494 FAD binding domain ABTJ_02642 PF00557 Metallopeptidase family M24 ABTJ_02642 PF05195 Aminopeptidase P, N-terminal domain ABTJ_02658 PF10145 Phage-related minor tail protein ABTJ_02658 PF01551 Peptidase family M23 ABTJ_02658 PF01464 Transglycosylase SLT domain ABTJ_02670 PF04860 Phage portal protein ABTJ_02690 PF03796 DnaB-like helicase C terminal domain ABTJ_02690 PF00772 DnaB-like helicase N terminal domain ABTJ_02694 PF00717 Peptidase S24-like ABTJ_02694 PF01726 LexA DNA binding domain ABTJ_02705 PF00884 Sulfatase ABTJ_02705 PF08019 Phosphoethanolamine transferase EptA/EptB ABTJ_02714 PF01476 LysM domain ABTJ_02714 PF01551 Peptidase family M23 ABTJ_02714 PF08525 Opacity-associated protein A N-terminal motif ABTJ_02778 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABTJ_02780 PF13018 Extended Signal Peptide of Type V secretion system ABTJ_02780 PF03895 YadA-like membrane anchor domain ABTJ_02780 PF05658 Head domain of trimeric autotransporter adhesin ABTJ_02780 PF05662 Coiled stalk of trimeric autotransporter adhesin ABTJ_02781 PF00004 ATPase family associated with various cellular activities (AAA) ABTJ_02781 PF05362 Lon protease (S16) C-terminal proteolytic domain ABTJ_02781 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABTJ_02782 PF02590 Predicted SPOUT methyltransferase ABTJ_02783 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABTJ_02785 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABTJ_02785 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABTJ_02786 PF04060 Putative Fe-S cluster ABTJ_02787 PF00730 HhH-GPD superfamily base excision DNA repair protein ABTJ_02787 PF00633 Helix-hairpin-helix motif ABTJ_02787 PF10576 Iron-sulfur binding domain of endonuclease III ABTJ_02788 PF05191 Adenylate kinase, active site lid ABTJ_02791 PF03717 Penicillin-binding Protein dimerisation domain ABTJ_02791 PF00905 Penicillin binding protein transpeptidase domain ABTJ_02794 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABTJ_02795 PF01730 UreF ABTJ_02796 PF02814 UreE urease accessory protein, N-terminal domain ABTJ_02796 PF05194 UreE urease accessory protein, C-terminal domain ABTJ_02797 PF00449 Urease alpha-subunit, N-terminal domain ABTJ_02797 PF01979 Amidohydrolase family ABTJ_02798 PF00699 Urease beta subunit ABTJ_02799 PF00547 Urease, gamma subunit ABTJ_02800 PF01774 UreD urease accessory protein ABTJ_02803 PF00463 Isocitrate lyase family ABTJ_02804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02804 PF03466 LysR substrate binding domain ABTJ_02805 PF01595 Cyclin M transmembrane N-terminal domain ABTJ_02805 PF03471 Transporter associated domain ABTJ_02805 PF00571 CBS domain ABTJ_02806 PF03600 Citrate transporter ABTJ_02809 PF00009 Elongation factor Tu GTP binding domain ABTJ_02810 PF01507 Phosphoadenosine phosphosulfate reductase family ABTJ_02812 PF14052 Capsule assembly protein Wzi ABTJ_02813 PF01336 OB-fold nucleic acid binding domain ABTJ_02813 PF00152 tRNA synthetases class II (D, K and N) ABTJ_02816 PF00301 Rubredoxin ABTJ_02817 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02817 PF18113 Rubredoxin binding C-terminal domain ABTJ_02818 PF00561 alpha/beta hydrolase fold ABTJ_02819 PF03466 LysR substrate binding domain ABTJ_02819 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02821 PF13089 Polyphosphate kinase N-terminal domain ABTJ_02821 PF02503 Polyphosphate kinase middle domain ABTJ_02821 PF13090 Polyphosphate kinase C-terminal domain 2 ABTJ_02821 PF17941 Polyphosphate kinase C-terminal domain 1 ABTJ_02822 PF00912 Transglycosylase ABTJ_02823 PF01694 Rhomboid family ABTJ_02825 PF00005 ABC transporter ABTJ_02826 PF13472 GDSL-like Lipase/Acylhydrolase family ABTJ_02827 PF00484 Carbonic anhydrase ABTJ_02828 PF00561 alpha/beta hydrolase fold ABTJ_02830 PF07715 TonB-dependent Receptor Plug Domain ABTJ_02830 PF00593 TonB dependent receptor ABTJ_02831 PF01521 Iron-sulphur cluster biosynthesis ABTJ_02831 PF01106 NifU-like domain ABTJ_02833 PF00884 Sulfatase ABTJ_02834 PF03781 Sulfatase-modifying factor enzyme 1 ABTJ_02837 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_02838 PF01384 Phosphate transporter family ABTJ_02839 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABTJ_02839 PF00809 Pterin binding enzyme ABTJ_02839 PF02574 Homocysteine S-methyltransferase ABTJ_02839 PF02607 B12 binding domain ABTJ_02839 PF02310 B12 binding domain ABTJ_02840 PF02780 Transketolase, C-terminal domain ABTJ_02840 PF02779 Transketolase, pyrimidine binding domain ABTJ_02841 PF00456 Transketolase, thiamine diphosphate binding domain ABTJ_02842 PF07690 Major Facilitator Superfamily ABTJ_02844 PF03466 LysR substrate binding domain ABTJ_02844 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02846 PF01263 Aldose 1-epimerase ABTJ_02847 PF07690 Major Facilitator Superfamily ABTJ_02848 PF02311 AraC-like ligand binding domain ABTJ_02848 PF12833 Helix-turn-helix domain ABTJ_02849 PF04960 Glutaminase ABTJ_02850 PF01327 Polypeptide deformylase ABTJ_02851 PF07690 Major Facilitator Superfamily ABTJ_02853 PF00205 Thiamine pyrophosphate enzyme, central domain ABTJ_02853 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABTJ_02853 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABTJ_02854 PF00171 Aldehyde dehydrogenase family ABTJ_02855 PF01958 Domain of unknown function DUF108 ABTJ_02855 PF03447 Homoserine dehydrogenase, NAD binding domain ABTJ_02857 PF12697 Alpha/beta hydrolase family ABTJ_02859 PF07690 Major Facilitator Superfamily ABTJ_02860 PF14759 Reductase C-terminal ABTJ_02860 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02861 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABTJ_02863 PF00355 Rieske [2Fe-2S] domain ABTJ_02865 PF00355 Rieske [2Fe-2S] domain ABTJ_02866 PF09339 IclR helix-turn-helix domain ABTJ_02866 PF01614 Bacterial transcriptional regulator ABTJ_02869 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_02871 PF00535 Glycosyl transferase family 2 ABTJ_02872 PF14883 Hypothetical glycosyl hydrolase family 13 ABTJ_02872 PF01522 Polysaccharide deacetylase ABTJ_02873 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABTJ_02874 PF07152 YaeQ protein ABTJ_02875 PF00375 Sodium:dicarboxylate symporter family ABTJ_02876 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABTJ_02876 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABTJ_02878 PF03061 Thioesterase superfamily ABTJ_02880 PF02028 BCCT, betaine/carnitine/choline family transporter ABTJ_02881 PF02028 BCCT, betaine/carnitine/choline family transporter ABTJ_02882 PF00440 Bacterial regulatory proteins, tetR family ABTJ_02882 PF13977 BetI-type transcriptional repressor, C-terminal ABTJ_02883 PF00171 Aldehyde dehydrogenase family ABTJ_02884 PF00732 GMC oxidoreductase ABTJ_02884 PF05199 GMC oxidoreductase ABTJ_02885 PF06039 Malate:quinone oxidoreductase (Mqo) ABTJ_02887 PF02574 Homocysteine S-methyltransferase ABTJ_02888 PF13520 Amino acid permease ABTJ_02893 PF00701 Dihydrodipicolinate synthetase family ABTJ_02894 PF00083 Sugar (and other) transporter ABTJ_02903 PF07690 Major Facilitator Superfamily ABTJ_02904 PF13533 Biotin-lipoyl like ABTJ_02905 PF03061 Thioesterase superfamily ABTJ_02906 PF00490 Delta-aminolevulinic acid dehydratase ABTJ_02907 PF01266 FAD dependent oxidoreductase ABTJ_02908 PF01370 NAD dependent epimerase/dehydratase family ABTJ_02908 PF08338 Domain of unknown function (DUF1731) ABTJ_02912 PF00149 Calcineurin-like phosphoesterase ABTJ_02912 PF12320 Type 5 capsule protein repressor C-terminal domain ABTJ_02914 PF01168 Alanine racemase, N-terminal domain ABTJ_02915 PF00437 Type II/IV secretion system protein ABTJ_02916 PF00437 Type II/IV secretion system protein ABTJ_02917 PF01475 Ferric uptake regulator family ABTJ_02918 PF04355 SmpA / OmlA family ABTJ_02919 PF03658 RnfH family Ubiquitin ABTJ_02921 PF01814 Hemerythrin HHE cation binding domain ABTJ_02922 PF13230 Glutamine amidotransferases class-II ABTJ_02924 PF00696 Amino acid kinase family ABTJ_02925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABTJ_02925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABTJ_02925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABTJ_02925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABTJ_02926 PF00692 dUTPase ABTJ_02927 PF00580 UvrD/REP helicase N-terminal domain ABTJ_02927 PF13361 UvrD-like helicase C-terminal domain ABTJ_02929 PF00691 OmpA family ABTJ_02929 PF13488 Glycine zipper ABTJ_02930 PF01553 Acyltransferase ABTJ_02932 PF03775 Septum formation inhibitor MinC, C-terminal domain ABTJ_02933 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABTJ_02934 PF03776 Septum formation topological specificity factor MinE ABTJ_02937 PF01810 LysE type translocator ABTJ_02938 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABTJ_02938 PF17854 FtsK alpha domain ABTJ_02938 PF09397 Ftsk gamma domain ABTJ_02938 PF01580 FtsK/SpoIIIE family ABTJ_02939 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABTJ_02940 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABTJ_02941 PF04377 Arginine-tRNA-protein transferase, C terminus ABTJ_02941 PF04376 Arginine-tRNA-protein transferase, N terminus ABTJ_02942 PF00583 Acetyltransferase (GNAT) family ABTJ_02945 PF00009 Elongation factor Tu GTP binding domain ABTJ_02945 PF03144 Elongation factor Tu domain 2 ABTJ_02945 PF03143 Elongation factor Tu C-terminal domain ABTJ_02946 PF00009 Elongation factor Tu GTP binding domain ABTJ_02946 PF03144 Elongation factor Tu domain 2 ABTJ_02946 PF03764 Elongation factor G, domain IV ABTJ_02946 PF00679 Elongation factor G C-terminus ABTJ_02946 PF14492 Elongation Factor G, domain II ABTJ_02947 PF00177 Ribosomal protein S7p/S5e ABTJ_02948 PF00164 Ribosomal protein S12/S23 ABTJ_02950 PF00109 Beta-ketoacyl synthase, N-terminal domain ABTJ_02950 PF02801 Beta-ketoacyl synthase, C-terminal domain ABTJ_02952 PF05726 Pirin C-terminal cupin domain ABTJ_02952 PF02678 Pirin ABTJ_02954 PF00795 Carbon-nitrogen hydrolase ABTJ_02954 PF02540 NAD synthase ABTJ_02957 PF00175 Oxidoreductase NAD-binding domain ABTJ_02957 PF00111 2Fe-2S iron-sulfur cluster binding domain ABTJ_02957 PF00970 Oxidoreductase FAD-binding domain ABTJ_02958 PF00171 Aldehyde dehydrogenase family ABTJ_02959 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABTJ_02959 PF00355 Rieske [2Fe-2S] domain ABTJ_02960 PF07859 alpha/beta hydrolase fold ABTJ_02961 PF02028 BCCT, betaine/carnitine/choline family transporter ABTJ_02962 PF00180 Isocitrate/isopropylmalate dehydrogenase ABTJ_02963 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_02963 PF03466 LysR substrate binding domain ABTJ_02967 PF00037 4Fe-4S binding domain ABTJ_02968 PF01467 Cytidylyltransferase-like ABTJ_02969 PF01668 SmpB protein ABTJ_02970 PF03358 NADPH-dependent FMN reductase ABTJ_02972 PF00849 RNA pseudouridylate synthase ABTJ_02972 PF01479 S4 domain ABTJ_02973 PF13525 Outer membrane lipoprotein ABTJ_02974 PF01807 CHC2 zinc finger ABTJ_02974 PF08275 DNA primase catalytic core, N-terminal domain ABTJ_02974 PF08278 DNA primase DnaG DnaB-binding ABTJ_02974 PF10410 DnaB-helicase binding domain of primase ABTJ_02975 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABTJ_02975 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABTJ_02975 PF01488 Shikimate / quinate 5-dehydrogenase ABTJ_02977 PF03550 Outer membrane lipoprotein LolB ABTJ_02978 PF08544 GHMP kinases C terminal ABTJ_02978 PF00288 GHMP kinases N terminal domain ABTJ_02983 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABTJ_02983 PF14572 Phosphoribosyl synthetase-associated domain ABTJ_02984 PF01386 Ribosomal L25p family ABTJ_02985 PF01195 Peptidyl-tRNA hydrolase ABTJ_02986 PF02261 Aspartate decarboxylase ABTJ_02990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABTJ_02992 PF08543 Phosphomethylpyrimidine kinase ABTJ_02992 PF02581 Thiamine monophosphate synthase ABTJ_02992 PF03070 TENA/THI-4/PQQC family ABTJ_02993 PF01476 LysM domain ABTJ_02993 PF04972 BON domain ABTJ_02994 PF00550 Phosphopantetheine attachment site ABTJ_02996 PF00698 Acyl transferase domain ABTJ_02997 PF01783 Ribosomal L32p protein family ABTJ_02998 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABTJ_02999 PF04315 Elongation factor P hydroxylase ABTJ_03000 PF01300 Telomere recombination ABTJ_03001 PF02616 Segregation and condensation protein ScpA ABTJ_03002 PF04079 Segregation and condensation complex subunit ScpB ABTJ_03003 PF01479 S4 domain ABTJ_03003 PF00849 RNA pseudouridylate synthase ABTJ_03006 PF00155 Aminotransferase class I and II ABTJ_03007 PF04055 Radical SAM superfamily ABTJ_03007 PF00202 Aminotransferase class-III ABTJ_03007 PF06968 Biotin and Thiamin Synthesis associated domain ABTJ_03008 PF12697 Alpha/beta hydrolase family ABTJ_03008 PF08241 Methyltransferase domain ABTJ_03009 PF02358 Trehalose-phosphatase ABTJ_03010 PF00982 Glycosyltransferase family 20 ABTJ_03011 PF07690 Major Facilitator Superfamily ABTJ_03012 PF00210 Ferritin-like domain ABTJ_03013 PF12826 Helix-hairpin-helix motif ABTJ_03013 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABTJ_03013 PF03120 NAD-dependent DNA ligase OB-fold domain ABTJ_03013 PF01653 NAD-dependent DNA ligase adenylation domain ABTJ_03013 PF00533 BRCA1 C Terminus (BRCT) domain ABTJ_03015 PF02463 RecF/RecN/SMC N terminal domain ABTJ_03015 PF06470 SMC proteins Flexible Hinge Domain ABTJ_03017 PF01925 Sulfite exporter TauE/SafE ABTJ_03019 PF03309 Type III pantothenate kinase ABTJ_03020 PF02881 SRP54-type protein, helical bundle domain ABTJ_03020 PF02978 Signal peptide binding domain ABTJ_03020 PF00448 SRP54-type protein, GTPase domain ABTJ_03023 PF01207 Dihydrouridine synthase (Dus) ABTJ_03029 PF00692 dUTPase ABTJ_03032 PF01048 Phosphorylase superfamily ABTJ_03033 PF10609 NUBPL iron-transfer P-loop NTPase ABTJ_03035 PF09334 tRNA synthetases class I (M) ABTJ_03035 PF01588 Putative tRNA binding domain ABTJ_03040 PF13533 Biotin-lipoyl like ABTJ_03041 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_03044 PF05552 Conserved TM helix ABTJ_03047 PF00970 Oxidoreductase FAD-binding domain ABTJ_03047 PF00175 Oxidoreductase NAD-binding domain ABTJ_03048 PF03466 LysR substrate binding domain ABTJ_03048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03049 PF00313 'Cold-shock' DNA-binding domain ABTJ_03051 PF00361 Proton-conducting membrane transporter ABTJ_03052 PF00361 Proton-conducting membrane transporter ABTJ_03053 PF00361 Proton-conducting membrane transporter ABTJ_03053 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABTJ_03054 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABTJ_03055 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABTJ_03056 PF12838 4Fe-4S dicluster domain ABTJ_03057 PF00146 NADH dehydrogenase ABTJ_03058 PF00384 Molybdopterin oxidoreductase ABTJ_03058 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABTJ_03058 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABTJ_03059 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABTJ_03059 PF10531 SLBB domain ABTJ_03059 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABTJ_03061 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABTJ_03061 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABTJ_03062 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABTJ_03063 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABTJ_03064 PF17151 Periplasmic sensor domain ABTJ_03064 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_03066 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_03066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_03066 PF00672 HAMP domain ABTJ_03067 PF00486 Transcriptional regulatory protein, C terminal ABTJ_03067 PF00072 Response regulator receiver domain ABTJ_03068 PF02867 Ribonucleotide reductase, barrel domain ABTJ_03068 PF03477 ATP cone domain ABTJ_03068 PF00317 Ribonucleotide reductase, all-alpha domain ABTJ_03070 PF00268 Ribonucleotide reductase, small chain ABTJ_03071 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_03071 PF13755 Sensor N-terminal transmembrane domain ABTJ_03071 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_03071 PF00672 HAMP domain ABTJ_03071 PF13756 Stimulus-sensing domain ABTJ_03085 PF13360 PQQ-like domain ABTJ_03085 PF01011 PQQ enzyme repeat ABTJ_03089 PF02567 Phenazine biosynthesis-like protein ABTJ_03094 PF01613 Flavin reductase like domain ABTJ_03095 PF08267 Cobalamin-independent synthase, N-terminal domain ABTJ_03095 PF01717 Cobalamin-independent synthase, Catalytic domain ABTJ_03097 PF03466 LysR substrate binding domain ABTJ_03097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03098 PF01810 LysE type translocator ABTJ_03100 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABTJ_03100 PF12833 Helix-turn-helix domain ABTJ_03101 PF07687 Peptidase dimerisation domain ABTJ_03101 PF01546 Peptidase family M20/M25/M40 ABTJ_03103 PF03466 LysR substrate binding domain ABTJ_03103 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03104 PF07690 Major Facilitator Superfamily ABTJ_03106 PF03466 LysR substrate binding domain ABTJ_03106 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03107 PF00890 FAD binding domain ABTJ_03107 PF14537 Cytochrome c3 ABTJ_03109 PF02515 CoA-transferase family III ABTJ_03110 PF07690 Major Facilitator Superfamily ABTJ_03111 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_03111 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_03111 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_03112 PF03466 LysR substrate binding domain ABTJ_03112 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03113 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_03113 PF00107 Zinc-binding dehydrogenase ABTJ_03114 PF00962 Adenosine/AMP deaminase ABTJ_03119 PF02445 Quinolinate synthetase A protein ABTJ_03120 PF01960 ArgJ family ABTJ_03121 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABTJ_03121 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABTJ_03122 PF00893 Small Multidrug Resistance protein ABTJ_03124 PF05275 Copper resistance protein B precursor (CopB) ABTJ_03125 PF00394 Multicopper oxidase ABTJ_03125 PF07731 Multicopper oxidase ABTJ_03125 PF07732 Multicopper oxidase ABTJ_03128 PF00834 Ribulose-phosphate 3 epimerase family ABTJ_03130 PF00756 Putative esterase ABTJ_03132 PF04445 Putative SAM-dependent methyltransferase ABTJ_03133 PF00814 Glycoprotease family ABTJ_03134 PF00132 Bacterial transferase hexapeptide (six repeats) ABTJ_03135 PF00293 NUDIX domain ABTJ_03144 PF04715 Anthranilate synthase component I, N terminal region ABTJ_03144 PF00425 chorismate binding enzyme ABTJ_03145 PF00155 Aminotransferase class I and II ABTJ_03146 PF00815 Histidinol dehydrogenase ABTJ_03147 PF01634 ATP phosphoribosyltransferase ABTJ_03148 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABTJ_03149 PF01722 BolA-like protein ABTJ_03150 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABTJ_03151 PF04552 Sigma-54, DNA binding domain ABTJ_03151 PF04963 Sigma-54 factor, core binding domain ABTJ_03151 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABTJ_03161 PF00795 Carbon-nitrogen hydrolase ABTJ_03163 PF01047 MarR family ABTJ_03164 PF02566 OsmC-like protein ABTJ_03165 PF00437 Type II/IV secretion system protein ABTJ_03169 PF01367 5'-3' exonuclease, C-terminal SAM fold ABTJ_03169 PF00476 DNA polymerase family A ABTJ_03169 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABTJ_03169 PF01612 3'-5' exonuclease ABTJ_03170 PF02325 YGGT family ABTJ_03171 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABTJ_03171 PF03807 NADP oxidoreductase coenzyme F420-dependent ABTJ_03172 PF11734 TilS substrate C-terminal domain ABTJ_03172 PF09179 TilS substrate binding domain ABTJ_03172 PF01171 PP-loop family ABTJ_03173 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABTJ_03174 PF02541 Ppx/GppA phosphatase family ABTJ_03175 PF00085 Thioredoxin ABTJ_03176 PF07498 Rho termination factor, N-terminal domain ABTJ_03176 PF07497 Rho termination factor, RNA-binding domain ABTJ_03176 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABTJ_03178 PF00216 Bacterial DNA-binding protein ABTJ_03179 PF01588 Putative tRNA binding domain ABTJ_03179 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABTJ_03179 PF03484 tRNA synthetase B5 domain ABTJ_03179 PF03147 Ferredoxin-fold anticodon binding domain ABTJ_03179 PF03483 B3/4 domain ABTJ_03180 PF01409 tRNA synthetases class II core domain (F) ABTJ_03180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABTJ_03184 PF00453 Ribosomal protein L20 ABTJ_03185 PF01632 Ribosomal protein L35 ABTJ_03186 PF07690 Major Facilitator Superfamily ABTJ_03187 PF09335 SNARE associated Golgi protein ABTJ_03188 PF00043 Glutathione S-transferase, C-terminal domain ABTJ_03188 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_03189 PF05198 Translation initiation factor IF-3, N-terminal domain ABTJ_03189 PF00707 Translation initiation factor IF-3, C-terminal domain ABTJ_03190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABTJ_03190 PF03129 Anticodon binding domain ABTJ_03190 PF02824 TGS domain ABTJ_03190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABTJ_03191 PF00501 AMP-binding enzyme ABTJ_03191 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03192 PF04751 Protein of unknown function (DUF615) ABTJ_03193 PF00381 PTS HPr component phosphorylation site ABTJ_03194 PF03668 P-loop ATPase protein family ABTJ_03195 PF02569 Pantoate-beta-alanine ligase ABTJ_03196 PF02548 Ketopantoate hydroxymethyltransferase ABTJ_03197 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABTJ_03198 PF12627 Probable RNA and SrmB- binding site of polymerase A ABTJ_03198 PF01743 Poly A polymerase head domain ABTJ_03198 PF12626 Polymerase A arginine-rich C-terminus ABTJ_03200 PF03819 MazG nucleotide pyrophosphohydrolase domain ABTJ_03202 PF02824 TGS domain ABTJ_03202 PF13291 ACT domain ABTJ_03202 PF04607 Region found in RelA / SpoT proteins ABTJ_03203 PF05958 tRNA (Uracil-5-)-methyltransferase ABTJ_03205 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_03206 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABTJ_03206 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_03206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_03206 PF01627 Hpt domain ABTJ_03206 PF00672 HAMP domain ABTJ_03206 PF00072 Response regulator receiver domain ABTJ_03207 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_03208 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABTJ_03208 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABTJ_03209 PF01261 Xylose isomerase-like TIM barrel ABTJ_03211 PF00106 short chain dehydrogenase ABTJ_03212 PF02233 NAD(P) transhydrogenase beta subunit ABTJ_03213 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABTJ_03214 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABTJ_03214 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABTJ_03215 PF00892 EamA-like transporter family ABTJ_03217 PF07690 Major Facilitator Superfamily ABTJ_03218 PF01207 Dihydrouridine synthase (Dus) ABTJ_03220 PF03466 LysR substrate binding domain ABTJ_03220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03221 PF00899 ThiF family ABTJ_03223 PF00330 Aconitase family (aconitate hydratase) ABTJ_03223 PF00694 Aconitase C-terminal domain ABTJ_03224 PF01026 TatD related DNase ABTJ_03227 PF03144 Elongation factor Tu domain 2 ABTJ_03227 PF16658 Class II release factor RF3, C-terminal domain ABTJ_03227 PF00009 Elongation factor Tu GTP binding domain ABTJ_03231 PF00563 EAL domain ABTJ_03231 PF00990 Diguanylate cyclase, GGDEF domain ABTJ_03231 PF03707 Bacterial signalling protein N terminal repeat ABTJ_03232 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABTJ_03232 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABTJ_03233 PF10369 Small subunit of acetolactate synthase ABTJ_03234 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABTJ_03234 PF00205 Thiamine pyrophosphate enzyme, central domain ABTJ_03234 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABTJ_03236 PF08264 Anticodon-binding domain of tRNA ABTJ_03236 PF00133 tRNA synthetases class I (I, L, M and V) ABTJ_03236 PF09334 tRNA synthetases class I (M) ABTJ_03236 PF13603 Leucyl-tRNA synthetase, Domain 2 ABTJ_03239 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABTJ_03240 PF00005 ABC transporter ABTJ_03240 PF12704 MacB-like periplasmic core domain ABTJ_03240 PF02687 FtsX-like permease family ABTJ_03241 PF02321 Outer membrane efflux protein ABTJ_03244 PF00929 Exonuclease ABTJ_03245 PF03193 RsgA GTPase ABTJ_03247 PF00462 Glutaredoxin ABTJ_03248 PF02556 Preprotein translocase subunit SecB ABTJ_03251 PF02801 Beta-ketoacyl synthase, C-terminal domain ABTJ_03251 PF00109 Beta-ketoacyl synthase, N-terminal domain ABTJ_03254 PF02801 Beta-ketoacyl synthase, C-terminal domain ABTJ_03254 PF00109 Beta-ketoacyl synthase, N-terminal domain ABTJ_03256 PF04820 Tryptophan halogenase ABTJ_03260 PF00221 Aromatic amino acid lyase ABTJ_03263 PF00501 AMP-binding enzyme ABTJ_03263 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03265 PF00550 Phosphopantetheine attachment site ABTJ_03266 PF00550 Phosphopantetheine attachment site ABTJ_03269 PF01926 50S ribosome-binding GTPase ABTJ_03269 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABTJ_03270 PF13360 PQQ-like domain ABTJ_03272 PF03129 Anticodon binding domain ABTJ_03272 PF13393 Histidyl-tRNA synthetase ABTJ_03273 PF04551 GcpE protein ABTJ_03274 PF13464 Domain of unknown function (DUF4115) ABTJ_03276 PF04055 Radical SAM superfamily ABTJ_03277 PF00334 Nucleoside diphosphate kinase ABTJ_03278 PF04384 Iron-sulphur cluster assembly ABTJ_03279 PF01569 PAP2 superfamily ABTJ_03280 PF00534 Glycosyl transferases group 1 ABTJ_03280 PF13439 Glycosyltransferase Family 4 ABTJ_03281 PF03572 Peptidase family S41 ABTJ_03281 PF00595 PDZ domain ABTJ_03281 PF17804 Tail specific protease N-terminal domain ABTJ_03281 PF11818 C-terminal domain of tail specific protease (DUF3340) ABTJ_03282 PF00933 Glycosyl hydrolase family 3 N terminal domain ABTJ_03284 PF00561 alpha/beta hydrolase fold ABTJ_03285 PF00171 Aldehyde dehydrogenase family ABTJ_03286 PF00171 Aldehyde dehydrogenase family ABTJ_03287 PF01202 Shikimate kinase ABTJ_03288 PF02447 GntP family permease ABTJ_03289 PF01081 KDPG and KHG aldolase ABTJ_03290 PF00920 Dehydratase family ABTJ_03291 PF00871 Acetokinase family ABTJ_03292 PF01515 Phosphate acetyl/butaryl transferase ABTJ_03292 PF07085 DRTGG domain ABTJ_03293 PF05681 Fumarate hydratase (Fumerase) ABTJ_03293 PF05683 Fumarase C-terminus ABTJ_03296 PF07724 AAA domain (Cdc48 subfamily) ABTJ_03296 PF10431 C-terminal, D2-small domain, of ClpB protein ABTJ_03296 PF06689 ClpX C4-type zinc finger ABTJ_03297 PF00574 Clp protease ABTJ_03298 PF05697 Bacterial trigger factor protein (TF) ABTJ_03298 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABTJ_03298 PF05698 Bacterial trigger factor protein (TF) C-terminus ABTJ_03299 PF07715 TonB-dependent Receptor Plug Domain ABTJ_03299 PF00593 TonB dependent receptor ABTJ_03300 PF13640 2OG-Fe(II) oxygenase superfamily ABTJ_03300 PF18331 PKHD-type hydroxylase C-terminal domain ABTJ_03301 PF00682 HMGL-like ABTJ_03301 PF08502 LeuA allosteric (dimerisation) domain ABTJ_03302 PF00561 alpha/beta hydrolase fold ABTJ_03303 PF00561 alpha/beta hydrolase fold ABTJ_03303 PF07021 Methionine biosynthesis protein MetW ABTJ_03305 PF01725 Ham1 family ABTJ_03307 PF02416 mttA/Hcf106 family ABTJ_03308 PF02416 mttA/Hcf106 family ABTJ_03309 PF00902 Sec-independent protein translocase protein (TatC) ABTJ_03313 PF01790 Prolipoprotein diacylglyceryl transferase ABTJ_03316 PF00303 Thymidylate synthase ABTJ_03317 PF00186 Dihydrofolate reductase ABTJ_03319 PF01625 Peptide methionine sulfoxide reductase ABTJ_03321 PF01618 MotA/TolQ/ExbB proton channel family ABTJ_03323 PF01842 ACT domain ABTJ_03323 PF00551 Formyl transferase ABTJ_03325 PF00171 Aldehyde dehydrogenase family ABTJ_03326 PF00830 Ribosomal L28 family ABTJ_03327 PF00471 Ribosomal protein L33 ABTJ_03328 PF00999 Sodium/hydrogen exchanger family ABTJ_03328 PF02254 TrkA-N domain ABTJ_03332 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABTJ_03333 PF13361 UvrD-like helicase C-terminal domain ABTJ_03333 PF00580 UvrD/REP helicase N-terminal domain ABTJ_03336 PF01131 DNA topoisomerase ABTJ_03336 PF08272 Topoisomerase I zinc-ribbon-like ABTJ_03336 PF01396 Topoisomerase DNA binding C4 zinc finger ABTJ_03336 PF01751 Toprim domain ABTJ_03338 PF01638 HxlR-like helix-turn-helix ABTJ_03339 PF00107 Zinc-binding dehydrogenase ABTJ_03339 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_03342 PF01810 LysE type translocator ABTJ_03343 PF03279 Bacterial lipid A biosynthesis acyltransferase ABTJ_03345 PF00375 Sodium:dicarboxylate symporter family ABTJ_03347 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABTJ_03347 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABTJ_03351 PF01416 tRNA pseudouridine synthase ABTJ_03353 PF01176 Translation initiation factor 1A / IF-1 ABTJ_03356 PF00180 Isocitrate/isopropylmalate dehydrogenase ABTJ_03358 PF00694 Aconitase C-terminal domain ABTJ_03359 PF00330 Aconitase family (aconitate hydratase) ABTJ_03361 PF03466 LysR substrate binding domain ABTJ_03361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03365 PF00293 NUDIX domain ABTJ_03366 PF01590 GAF domain ABTJ_03366 PF05524 PEP-utilising enzyme, N-terminal ABTJ_03366 PF00391 PEP-utilising enzyme, mobile domain ABTJ_03366 PF02896 PEP-utilising enzyme, TIM barrel domain ABTJ_03367 PF00141 Peroxidase ABTJ_03368 PF12706 Beta-lactamase superfamily domain ABTJ_03369 PF03466 LysR substrate binding domain ABTJ_03369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03371 PF02798 Glutathione S-transferase, N-terminal domain ABTJ_03372 PF08279 HTH domain ABTJ_03372 PF13280 WYL domain ABTJ_03373 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_03374 PF01479 S4 domain ABTJ_03374 PF00849 RNA pseudouridylate synthase ABTJ_03375 PF12111 Polyribonucleotide phosphorylase C terminal ABTJ_03375 PF10150 Ribonuclease E/G family ABTJ_03375 PF00575 S1 RNA binding domain ABTJ_03376 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03376 PF00501 AMP-binding enzyme ABTJ_03379 PF03466 LysR substrate binding domain ABTJ_03379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03380 PF00106 short chain dehydrogenase ABTJ_03381 PF06969 HemN C-terminal domain ABTJ_03381 PF04055 Radical SAM superfamily ABTJ_03383 PF01554 MatE ABTJ_03384 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_03384 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_03384 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_03385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_03385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_03386 PF03109 ABC1 family ABTJ_03387 PF01197 Ribosomal protein L31 ABTJ_03389 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABTJ_03393 PF03884 DNA gyrase inhibitor YacG ABTJ_03394 PF00753 Metallo-beta-lactamase superfamily ABTJ_03395 PF00762 Ferrochelatase ABTJ_03397 PF01177 Asp/Glu/Hydantoin racemase ABTJ_03400 PF01206 Sulfurtransferase TusA ABTJ_03401 PF03471 Transporter associated domain ABTJ_03401 PF00571 CBS domain ABTJ_03402 PF00795 Carbon-nitrogen hydrolase ABTJ_03403 PF01588 Putative tRNA binding domain ABTJ_03405 PF07963 Prokaryotic N-terminal methylation motif ABTJ_03405 PF08334 Type II secretion system (T2SS), protein G ABTJ_03406 PF00482 Type II secretion system (T2SS), protein F ABTJ_03407 PF00271 Helicase conserved C-terminal domain ABTJ_03407 PF00270 DEAD/DEAH box helicase ABTJ_03407 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABTJ_03407 PF18074 Primosomal protein N C-terminal domain ABTJ_03407 PF17764 3′ DNA-binding domain (3′BD) ABTJ_03408 PF00999 Sodium/hydrogen exchanger family ABTJ_03408 PF02254 TrkA-N domain ABTJ_03409 PF01430 Hsp33 protein ABTJ_03411 PF00226 DnaJ domain ABTJ_03411 PF01556 DnaJ C terminal domain ABTJ_03413 PF01544 CorA-like Mg2+ transporter protein ABTJ_03414 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABTJ_03414 PF00013 KH domain ABTJ_03414 PF01138 3' exoribonuclease family, domain 1 ABTJ_03414 PF03725 3' exoribonuclease family, domain 2 ABTJ_03414 PF00575 S1 RNA binding domain ABTJ_03415 PF00312 Ribosomal protein S15 ABTJ_03417 PF13538 UvrD-like helicase C-terminal domain ABTJ_03418 PF12705 PD-(D/E)XK nuclease superfamily ABTJ_03418 PF00580 UvrD/REP helicase N-terminal domain ABTJ_03418 PF13361 UvrD-like helicase C-terminal domain ABTJ_03419 PF17946 RecC C-terminal domain ABTJ_03421 PF03976 Polyphosphate kinase 2 (PPK2) ABTJ_03423 PF01209 ubiE/COQ5 methyltransferase family ABTJ_03425 PF03109 ABC1 family ABTJ_03426 PF01494 FAD binding domain ABTJ_03427 PF01502 Phosphoribosyl-AMP cyclohydrolase ABTJ_03430 PF13244 Domain of unknown function (DUF4040) ABTJ_03430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABTJ_03430 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABTJ_03430 PF00361 Proton-conducting membrane transporter ABTJ_03431 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABTJ_03432 PF00361 Proton-conducting membrane transporter ABTJ_03434 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABTJ_03436 PF02033 Ribosome-binding factor A ABTJ_03437 PF11987 Translation-initiation factor 2 ABTJ_03437 PF08364 Bacterial translation initiation factor IF-2 associated region ABTJ_03437 PF04760 Translation initiation factor IF-2, N-terminal region ABTJ_03437 PF00009 Elongation factor Tu GTP binding domain ABTJ_03438 PF13184 NusA-like KH domain ABTJ_03438 PF00575 S1 RNA binding domain ABTJ_03438 PF08529 NusA N-terminal domain ABTJ_03439 PF17384 RimP C-terminal SH3 domain ABTJ_03439 PF02576 RimP N-terminal domain ABTJ_03443 PF03840 Preprotein translocase SecG subunit ABTJ_03444 PF00121 Triosephosphate isomerase ABTJ_03445 PF00437 Type II/IV secretion system protein ABTJ_03445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABTJ_03446 PF00482 Type II secretion system (T2SS), protein F ABTJ_03447 PF06750 Bacterial Peptidase A24 N-terminal domain ABTJ_03447 PF01478 Type IV leader peptidase family ABTJ_03448 PF01121 Dephospho-CoA kinase ABTJ_03450 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABTJ_03450 PF00588 SpoU rRNA Methylase family ABTJ_03451 PF06865 Pyrimidine/purine nucleoside phosphorylase ABTJ_03453 PF02463 RecF/RecN/SMC N terminal domain ABTJ_03454 PF02622 Uncharacterized ACR, COG1678 ABTJ_03455 PF03652 Holliday junction resolvase ABTJ_03456 PF13533 Biotin-lipoyl like ABTJ_03461 PF12833 Helix-turn-helix domain ABTJ_03461 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABTJ_03461 PF02805 Metal binding domain of Ada ABTJ_03461 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABTJ_03462 PF01066 CDP-alcohol phosphatidyltransferase ABTJ_03464 PF01541 GIY-YIG catalytic domain ABTJ_03464 PF02151 UvrB/uvrC motif ABTJ_03464 PF08459 UvrC Helix-hairpin-helix N-terminal ABTJ_03469 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_03469 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABTJ_03469 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABTJ_03470 PF00108 Thiolase, N-terminal domain ABTJ_03470 PF02803 Thiolase, C-terminal domain ABTJ_03474 PF00376 MerR family regulatory protein ABTJ_03474 PF09278 MerR, DNA binding ABTJ_03476 PF01323 DSBA-like thioredoxin domain ABTJ_03479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_03479 PF00183 Hsp90 protein ABTJ_03482 PF13726 Na+-H+ antiporter family ABTJ_03482 PF03553 Na+/H+ antiporter family ABTJ_03483 PF00561 alpha/beta hydrolase fold ABTJ_03487 PF00623 RNA polymerase Rpb1, domain 2 ABTJ_03487 PF04997 RNA polymerase Rpb1, domain 1 ABTJ_03487 PF05000 RNA polymerase Rpb1, domain 4 ABTJ_03487 PF04998 RNA polymerase Rpb1, domain 5 ABTJ_03487 PF04983 RNA polymerase Rpb1, domain 3 ABTJ_03488 PF04560 RNA polymerase Rpb2, domain 7 ABTJ_03488 PF04561 RNA polymerase Rpb2, domain 2 ABTJ_03488 PF04565 RNA polymerase Rpb2, domain 3 ABTJ_03488 PF04563 RNA polymerase beta subunit ABTJ_03488 PF00562 RNA polymerase Rpb2, domain 6 ABTJ_03488 PF10385 RNA polymerase beta subunit external 1 domain ABTJ_03489 PF16320 Ribosomal protein L7/L12 dimerisation domain ABTJ_03489 PF00542 Ribosomal protein L7/L12 C-terminal domain ABTJ_03490 PF00466 Ribosomal protein L10 ABTJ_03491 PF00687 Ribosomal protein L1p/L10e family ABTJ_03492 PF00298 Ribosomal protein L11, RNA binding domain ABTJ_03492 PF03946 Ribosomal protein L11, N-terminal domain ABTJ_03493 PF02357 Transcription termination factor nusG ABTJ_03493 PF00467 KOW motif ABTJ_03494 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABTJ_03496 PF03143 Elongation factor Tu C-terminal domain ABTJ_03496 PF03144 Elongation factor Tu domain 2 ABTJ_03496 PF00009 Elongation factor Tu GTP binding domain ABTJ_03501 PF00425 chorismate binding enzyme ABTJ_03501 PF04715 Anthranilate synthase component I, N terminal region ABTJ_03502 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_03503 PF12401 Protein of unknown function (DUF2662) ABTJ_03503 PF00498 FHA domain ABTJ_03504 PF00263 Bacterial type II and III secretion system protein ABTJ_03504 PF03958 Bacterial type II/III secretion system short domain ABTJ_03507 PF00816 H-NS histone family ABTJ_03512 PF03900 Porphobilinogen deaminase, C-terminal domain ABTJ_03512 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABTJ_03513 PF00072 Response regulator receiver domain ABTJ_03513 PF04397 LytTr DNA-binding domain ABTJ_03514 PF07694 5TMR of 5TMR-LYT ABTJ_03514 PF06580 Histidine kinase ABTJ_03514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_03515 PF14698 Argininosuccinate lyase C-terminal ABTJ_03515 PF00206 Lyase ABTJ_03516 PF04362 Bacterial Fe(2+) trafficking ABTJ_03517 PF01895 PhoU domain ABTJ_03518 PF02321 Outer membrane efflux protein ABTJ_03519 PF00892 EamA-like transporter family ABTJ_03523 PF13667 ThiC-associated domain ABTJ_03523 PF01964 Radical SAM ThiC family ABTJ_03524 PF00293 NUDIX domain ABTJ_03525 PF00149 Calcineurin-like phosphoesterase ABTJ_03526 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABTJ_03527 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABTJ_03528 PF01098 Cell cycle protein ABTJ_03529 PF02875 Mur ligase family, glutamate ligase domain ABTJ_03529 PF08245 Mur ligase middle domain ABTJ_03531 PF07670 Nucleoside recognition ABTJ_03531 PF07664 Ferrous iron transport protein B C terminus ABTJ_03531 PF02421 Ferrous iron transport protein B ABTJ_03533 PF00589 Phage integrase family ABTJ_03533 PF02899 Phage integrase, N-terminal SAM-like domain ABTJ_03534 PF13098 Thioredoxin-like domain ABTJ_03534 PF10411 Disulfide bond isomerase protein N-terminus ABTJ_03535 PF03447 Homoserine dehydrogenase, NAD binding domain ABTJ_03535 PF00742 Homoserine dehydrogenase ABTJ_03535 PF01842 ACT domain ABTJ_03536 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_03537 PF00768 D-alanyl-D-alanine carboxypeptidase ABTJ_03538 PF00196 Bacterial regulatory proteins, luxR family ABTJ_03538 PF00072 Response regulator receiver domain ABTJ_03539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABTJ_03539 PF00512 His Kinase A (phospho-acceptor) domain ABTJ_03540 PF00158 Sigma-54 interaction domain ABTJ_03540 PF02954 Bacterial regulatory protein, Fis family ABTJ_03540 PF00072 Response regulator receiver domain ABTJ_03541 PF00595 PDZ domain ABTJ_03541 PF03572 Peptidase family S41 ABTJ_03542 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABTJ_03542 PF01676 Metalloenzyme superfamily ABTJ_03543 PF03739 Lipopolysaccharide export system permease LptF/LptG ABTJ_03545 PF00883 Cytosol aminopeptidase family, catalytic domain ABTJ_03545 PF02789 Cytosol aminopeptidase family, N-terminal domain ABTJ_03549 PF00677 Lumazine binding domain ABTJ_03551 PF01872 RibD C-terminal domain ABTJ_03551 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABTJ_03552 PF03477 ATP cone domain ABTJ_03553 PF00909 Ammonium Transporter Family ABTJ_03554 PF00543 Nitrogen regulatory protein P-II ABTJ_03556 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABTJ_03556 PF01078 Magnesium chelatase, subunit ChlI ABTJ_03558 PF01636 Phosphotransferase enzyme family ABTJ_03559 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ABTJ_03563 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03563 PF02909 Tetracyclin repressor-like, C-terminal domain ABTJ_03564 PF07690 Major Facilitator Superfamily ABTJ_03566 PF01740 STAS domain ABTJ_03566 PF00916 Sulfate permease family ABTJ_03567 PF00582 Universal stress protein family ABTJ_03573 PF00665 Integrase core domain ABTJ_03575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABTJ_03575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABTJ_03575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABTJ_03575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABTJ_03576 PF00809 Pterin binding enzyme ABTJ_03580 PF00665 Integrase core domain ABTJ_03585 PF02899 Phage integrase, N-terminal SAM-like domain ABTJ_03585 PF00589 Phage integrase family ABTJ_03591 PF01740 STAS domain ABTJ_03591 PF00916 Sulfate permease family ABTJ_03592 PF00582 Universal stress protein family ABTJ_03596 PF00665 Integrase core domain ABTJ_03598 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABTJ_03598 PF01078 Magnesium chelatase, subunit ChlI ABTJ_03599 PF00392 Bacterial regulatory proteins, gntR family ABTJ_03599 PF00155 Aminotransferase class I and II ABTJ_03601 PF00701 Dihydrodipicolinate synthetase family ABTJ_03604 PF03573 outer membrane porin, OprD family ABTJ_03605 PF00719 Inorganic pyrophosphatase ABTJ_03608 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03608 PF00501 AMP-binding enzyme ABTJ_03609 PF03989 DNA gyrase C-terminal domain, beta-propeller ABTJ_03609 PF00521 DNA gyrase/topoisomerase IV, subunit A ABTJ_03610 PF07690 Major Facilitator Superfamily ABTJ_03611 PF03458 UPF0126 domain ABTJ_03612 PF02810 SEC-C motif ABTJ_03613 PF03741 Integral membrane protein TerC family ABTJ_03613 PF03471 Transporter associated domain ABTJ_03614 PF03641 Possible lysine decarboxylase ABTJ_03615 PF07690 Major Facilitator Superfamily ABTJ_03617 PF11799 impB/mucB/samB family C-terminal domain ABTJ_03617 PF00817 impB/mucB/samB family ABTJ_03617 PF11798 IMS family HHH motif ABTJ_03620 PF08497 Radical SAM N-terminal ABTJ_03620 PF11842 Domain of unknown function (DUF3362) ABTJ_03620 PF04055 Radical SAM superfamily ABTJ_03624 PF03358 NADPH-dependent FMN reductase ABTJ_03626 PF00291 Pyridoxal-phosphate dependent enzyme ABTJ_03634 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03639 PF01327 Polypeptide deformylase ABTJ_03641 PF02481 DNA recombination-mediator protein A ABTJ_03641 PF17782 DprA winged helix domain ABTJ_03642 PF01300 Telomere recombination ABTJ_03643 PF00892 EamA-like transporter family ABTJ_03644 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03645 PF07690 Major Facilitator Superfamily ABTJ_03647 PF00255 Glutathione peroxidase ABTJ_03649 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABTJ_03650 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABTJ_03650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABTJ_03651 PF00231 ATP synthase ABTJ_03652 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABTJ_03652 PF00306 ATP synthase alpha/beta chain, C terminal domain ABTJ_03652 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABTJ_03653 PF00213 ATP synthase delta (OSCP) subunit ABTJ_03654 PF00430 ATP synthase B/B' CF(0) ABTJ_03655 PF00137 ATP synthase subunit C ABTJ_03656 PF00119 ATP synthase A chain ABTJ_03660 PF00005 ABC transporter ABTJ_03661 PF00950 ABC 3 transport family ABTJ_03662 PF01810 LysE type translocator ABTJ_03663 PF04261 Dyp-type peroxidase family ABTJ_03664 PF00390 Malic enzyme, N-terminal domain ABTJ_03664 PF03949 Malic enzyme, NAD binding domain ABTJ_03665 PF03485 Arginyl tRNA synthetase N terminal domain ABTJ_03665 PF05746 DALR anticodon binding domain ABTJ_03665 PF00750 tRNA synthetases class I (R) ABTJ_03669 PF05726 Pirin C-terminal cupin domain ABTJ_03669 PF02678 Pirin ABTJ_03671 PF03551 Transcriptional regulator PadR-like family ABTJ_03672 PF01909 Nucleotidyltransferase domain ABTJ_03672 PF13427 Domain of unknown function (DUF4111) ABTJ_03673 PF00117 Glutamine amidotransferase class-I ABTJ_03673 PF02540 NAD synthase ABTJ_03673 PF00958 GMP synthase C terminal domain ABTJ_03674 PF04286 Protein of unknown function (DUF445) ABTJ_03675 PF07681 DoxX ABTJ_03676 PF09335 SNARE associated Golgi protein ABTJ_03679 PF13614 AAA domain ABTJ_03681 PF01722 BolA-like protein ABTJ_03685 PF01648 4'-phosphopantetheinyl transferase superfamily ABTJ_03686 PF16363 GDP-mannose 4,6 dehydratase ABTJ_03689 PF00550 Phosphopantetheine attachment site ABTJ_03689 PF00975 Thioesterase domain ABTJ_03689 PF00501 AMP-binding enzyme ABTJ_03689 PF00668 Condensation domain ABTJ_03689 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03690 PF02801 Beta-ketoacyl synthase, C-terminal domain ABTJ_03690 PF08242 Methyltransferase domain ABTJ_03690 PF00550 Phosphopantetheine attachment site ABTJ_03690 PF14765 Polyketide synthase dehydratase ABTJ_03690 PF00975 Thioesterase domain ABTJ_03690 PF00109 Beta-ketoacyl synthase, N-terminal domain ABTJ_03690 PF16197 Ketoacyl-synthetase C-terminal extension ABTJ_03691 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_03691 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_03691 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_03692 PF00501 AMP-binding enzyme ABTJ_03693 PF03472 Autoinducer binding domain ABTJ_03693 PF00196 Bacterial regulatory proteins, luxR family ABTJ_03695 PF00765 Autoinducer synthase ABTJ_03696 PF01047 MarR family ABTJ_03697 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABTJ_03698 PF00834 Ribulose-phosphate 3 epimerase family ABTJ_03700 PF00501 AMP-binding enzyme ABTJ_03700 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03701 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABTJ_03701 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABTJ_03702 PF07690 Major Facilitator Superfamily ABTJ_03702 PF00083 Sugar (and other) transporter ABTJ_03703 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_03704 PF00378 Enoyl-CoA hydratase/isomerase ABTJ_03705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABTJ_03705 PF02770 Acyl-CoA dehydrogenase, middle domain ABTJ_03705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABTJ_03706 PF13193 AMP-binding enzyme C-terminal domain ABTJ_03706 PF00501 AMP-binding enzyme ABTJ_03707 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABTJ_03707 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABTJ_03708 PF00171 Aldehyde dehydrogenase family ABTJ_03710 PF00324 Amino acid permease ABTJ_03711 PF00324 Amino acid permease ABTJ_03712 PF01042 Endoribonuclease L-PSP ABTJ_03713 PF01168 Alanine racemase, N-terminal domain ABTJ_03713 PF00842 Alanine racemase, C-terminal domain ABTJ_03714 PF01266 FAD dependent oxidoreductase ABTJ_03715 PF01037 Lrp/AsnC ligand binding domain ABTJ_03717 PF00593 TonB dependent receptor ABTJ_03717 PF07715 TonB-dependent Receptor Plug Domain ABTJ_03720 PF00849 RNA pseudouridylate synthase ABTJ_03723 PF08361 MAATS-type transcriptional repressor, C-terminal region ABTJ_03723 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03734 PF00330 Aconitase family (aconitate hydratase) ABTJ_03734 PF00694 Aconitase C-terminal domain ABTJ_03735 PF00285 Citrate synthase, C-terminal domain ABTJ_03737 PF00392 Bacterial regulatory proteins, gntR family ABTJ_03737 PF07729 FCD domain ABTJ_03738 PF00155 Aminotransferase class I and II ABTJ_03739 PF01565 FAD binding domain ABTJ_03739 PF09330 D-lactate dehydrogenase, membrane binding ABTJ_03740 PF01070 FMN-dependent dehydrogenase ABTJ_03741 PF07729 FCD domain ABTJ_03741 PF00392 Bacterial regulatory proteins, gntR family ABTJ_03742 PF02652 L-lactate permease ABTJ_03743 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABTJ_03743 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABTJ_03743 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABTJ_03743 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABTJ_03744 PF16363 GDP-mannose 4,6 dehydratase ABTJ_03745 PF00342 Phosphoglucose isomerase ABTJ_03746 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABTJ_03746 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABTJ_03746 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABTJ_03747 PF00483 Nucleotidyl transferase ABTJ_03748 PF02397 Bacterial sugar transferase ABTJ_03749 PF00953 Glycosyl transferase family 4 ABTJ_03750 PF01370 NAD dependent epimerase/dehydratase family ABTJ_03751 PF13579 Glycosyl transferase 4-like domain ABTJ_03752 PF02350 UDP-N-acetylglucosamine 2-epimerase ABTJ_03753 PF01370 NAD dependent epimerase/dehydratase family ABTJ_03754 PF08485 Polysaccharide biosynthesis protein C-terminal ABTJ_03754 PF02719 Polysaccharide biosynthesis protein ABTJ_03760 PF01370 NAD dependent epimerase/dehydratase family ABTJ_03761 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABTJ_03761 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABTJ_03761 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABTJ_03762 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABTJ_03762 PF02563 Polysaccharide biosynthesis/export protein ABTJ_03762 PF10531 SLBB domain ABTJ_03763 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABTJ_03764 PF02706 Chain length determinant protein ABTJ_03764 PF13807 G-rich domain on putative tyrosine kinase ABTJ_03764 PF13614 AAA domain ABTJ_03765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABTJ_03765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABTJ_03766 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABTJ_03766 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABTJ_03767 PF03023 Lipid II flippase MurJ ABTJ_03768 PF01510 N-acetylmuramoyl-L-alanine amidase ABTJ_03769 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABTJ_03769 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABTJ_03771 PF05506 Domain of unknown function (DUF756) ABTJ_03771 PF04185 Phosphoesterase family ABTJ_03772 PF01138 3' exoribonuclease family, domain 1 ABTJ_03772 PF03725 3' exoribonuclease family, domain 2 ABTJ_03773 PF00487 Fatty acid desaturase ABTJ_03774 PF00175 Oxidoreductase NAD-binding domain ABTJ_03775 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03776 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03776 PF08360 QacR-like protein, C-terminal region ABTJ_03777 PF01323 DSBA-like thioredoxin domain ABTJ_03779 PF13419 Haloacid dehalogenase-like hydrolase ABTJ_03780 PF00106 short chain dehydrogenase ABTJ_03783 PF00583 Acetyltransferase (GNAT) family ABTJ_03783 PF00696 Amino acid kinase family ABTJ_03784 PF09084 NMT1/THI5 like ABTJ_03785 PF09084 NMT1/THI5 like ABTJ_03786 PF00296 Luciferase-like monooxygenase ABTJ_03787 PF00528 Binding-protein-dependent transport system inner membrane component ABTJ_03788 PF00005 ABC transporter ABTJ_03789 PF08362 YcdC-like protein, C-terminal region ABTJ_03789 PF00440 Bacterial regulatory proteins, tetR family ABTJ_03790 PF01048 Phosphorylase superfamily ABTJ_03792 PF06574 FAD synthetase ABTJ_03792 PF01687 Riboflavin kinase ABTJ_03793 PF08264 Anticodon-binding domain of tRNA ABTJ_03793 PF00133 tRNA synthetases class I (I, L, M and V) ABTJ_03793 PF06827 Zinc finger found in FPG and IleRS ABTJ_03794 PF01252 Signal peptidase (SPase) II ABTJ_03795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABTJ_03804 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABTJ_03805 PF07859 alpha/beta hydrolase fold ABTJ_03809 PF03466 LysR substrate binding domain ABTJ_03809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABTJ_03810 PF01025 GrpE ABTJ_03811 PF00012 Hsp70 protein ABTJ_03815 PF13406 Transglycosylase SLT domain ABTJ_03817 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABTJ_03817 PF02222 ATP-grasp domain ABTJ_03818 PF00731 AIR carboxylase ABTJ_03820 PF08245 Mur ligase middle domain ABTJ_03820 PF01225 Mur ligase family, catalytic domain ABTJ_03820 PF02875 Mur ligase family, glutamate ligase domain ABTJ_03822 PF01569 PAP2 superfamily ABTJ_03823 PF03741 Integral membrane protein TerC family ABTJ_03825 PF03738 Glutathionylspermidine synthase preATP-grasp ABTJ_03826 PF00355 Rieske [2Fe-2S] domain ABTJ_03827 PF01979 Amidohydrolase family ABTJ_03829 PF00156 Phosphoribosyl transferase domain ABTJ_03831 PF13098 Thioredoxin-like domain ABTJ_03831 PF10411 Disulfide bond isomerase protein N-terminus ABTJ_03832 PF01545 Cation efflux family ABTJ_03832 PF16916 Dimerisation domain of Zinc Transporter ABTJ_03833 PF02583 Metal-sensitive transcriptional repressor ABTJ_03834 PF12631 MnmE helical domain ABTJ_03834 PF01926 50S ribosome-binding GTPase ABTJ_03834 PF10396 GTP-binding protein TrmE N-terminus ABTJ_03835 PF02096 60Kd inner membrane protein ABTJ_03835 PF14849 YidC periplasmic domain ABTJ_03836 PF01809 Putative membrane protein insertion efficiency factor ABTJ_03837 PF00825 Ribonuclease P ABTJ_03838 PF00468 Ribosomal protein L34 ABTJ_p0011 PF00816 H-NS histone family ABTJ_p0014 PF00565 Staphylococcal nuclease homologue ABTJ_p0034 PF06122 Conjugative relaxosome accessory transposon protein ABTJ_p0036 PF06986 Type-1V conjugative transfer system mating pair stabilisation ABTJ_p0038 PF06834 TraU protein ABTJ_p0044 PF10411 Disulfide bond isomerase protein N-terminus ABTJ_p0044 PF13098 Thioredoxin-like domain ABTJ_p0056 PF00239 Resolvase, N terminal domain ABTJ_p0056 PF02796 Helix-turn-helix domain of resolvase ABTJ_p0069 PF08751 TrwC relaxase ABTJ_p0069 PF07057 DNA helicase TraI ABTJ_p0069 PF18272 single-stranded DNA binding TraI N-terminal subdomain ABTJ_p0069 PF18340 DNA relaxase TraI 2B/2B-like domain ABTJ_p0074 PF00684 DnaJ central domain ABTJ_p0074 PF01556 DnaJ C terminal domain ABTJ_p0074 PF00226 DnaJ domain ABTJ_p0085 PF00905 Penicillin binding protein transpeptidase domain ABTJ_p0086 PF00905 Penicillin binding protein transpeptidase domain ABTJ_p0090 PF13614 AAA domain ABTJ_p0091 PF10544 T5orf172 domain ABTJ_p0109 PF13614 AAA domain ABTJ_p2005 PF10410 DnaB-helicase binding domain of primase ABTJ_p2005 PF01807 CHC2 zinc finger ABTJ_p2005 PF08275 DNA primase catalytic core, N-terminal domain ABTJ_p2011 PF00625 Guanylate kinase ABTJ_p2014 PF07015 VirC1 protein ABTJ_p2016 PF00589 Phage integrase family ABTJ_p2016 PF02899 Phage integrase, N-terminal SAM-like domain ABTJ_p2024 PF02811 PHP domain ABTJ_p2024 PF14579 Helix-hairpin-helix motif ABTJ_p2024 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABTJ_p2024 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABTJ_p2026 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABTJ_p2026 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABTJ_p2026 PF14579 Helix-hairpin-helix motif ABTJ_p2026 PF02811 PHP domain ABTJ_p2029 PF01367 5'-3' exonuclease, C-terminal SAM fold ABTJ_p2029 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABTJ_p2029 PF01612 3'-5' exonuclease ABTJ_p2029 PF00476 DNA polymerase family A ABTJ_p2030 PF00154 recA bacterial DNA recombination protein ABTJ_p2030 PF03161 LAGLIDADG DNA endonuclease family ABTJ_p2036 PF06470 SMC proteins Flexible Hinge Domain ABTJ_p2036 PF02463 RecF/RecN/SMC N terminal domain ABTJ_p2040 PF00317 Ribonucleotide reductase, all-alpha domain ABTJ_p2040 PF03477 ATP cone domain ABTJ_p2040 PF02867 Ribonucleotide reductase, barrel domain ABTJ_p2041 PF00268 Ribonucleotide reductase, small chain ABTJ_p2050 PF00929 Exonuclease ABTJ_p2059 PF13737 Transposase DDE domain ABTJ_p2060 PF16884 N-terminal domain of oxidoreductase ABTJ_p2060 PF00107 Zinc-binding dehydrogenase ABTJ_p2061 PF16925 Tetracyclin repressor-like, C-terminal domain ABTJ_p2061 PF00440 Bacterial regulatory proteins, tetR family ABTJ_p2063 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABTJ_p2065 PF00465 Iron-containing alcohol dehydrogenase ABTJ_p2067 PF00756 Putative esterase ABTJ_p2068 PF00107 Zinc-binding dehydrogenase ABTJ_p2068 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_p2069 PF02583 Metal-sensitive transcriptional repressor ABTJ_p2070 PF00665 Integrase core domain ABTJ_p2070 PF13333 Integrase core domain ABTJ_p2070 PF13276 HTH-like domain ABTJ_p2073 PF00107 Zinc-binding dehydrogenase ABTJ_p2073 PF08240 Alcohol dehydrogenase GroES-like domain ABTJ_p2073 PF13823 Alcohol dehydrogenase GroES-associated ABTJ_p2075 PF13737 Transposase DDE domain ABTJ_p2088 PF04650 YSIRK type signal peptide ABTJ_p2088 PF03373 Octapeptide repeat ABTJ_p2088 PF01476 LysM domain ABTJ_p2088 PF00746 LPXTG cell wall anchor motif ABTJ_p2088 PF02216 B domain ABTJ_p2091 PF17757 UvrB interaction domain ABTJ_p2091 PF00271 Helicase conserved C-terminal domain ABTJ_p2091 PF02559 CarD-like/TRCF domain ABTJ_p2091 PF00270 DEAD/DEAH box helicase ABTJ_p2091 PF03461 TRCF domain ABTJ_p2095 PF09383 NIL domain ABTJ_p2095 PF00005 ABC transporter