locus-tag	class	description
ABTJ_00002	COG0592	DNA-directed DNA polymerase activity
ABTJ_00004	COG0187	DNA topoisomerase II activity
ABTJ_00006	COG0586	Pfam SNARE associated Golgi protein
ABTJ_00007	COG0488	(ABC) transporter
ABTJ_00012	COG0596	Alpha beta hydrolase
ABTJ_00013	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABTJ_00014	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABTJ_00023	COG0733	neurotransmitter:sodium symporter activity
ABTJ_00031	COG2233	PERMEase
ABTJ_00034	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABTJ_00041	COG2814	Major facilitator Superfamily
ABTJ_00042	COG0656	L-ascorbic acid biosynthetic process
ABTJ_00043	COG0583	DNA-binding transcription factor activity
ABTJ_00045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABTJ_00046	COG1064	alcohol dehydrogenase
ABTJ_00047	COG2818	Glycosylase
ABTJ_00050	COG1194	a g-specific adenine glycosylase
ABTJ_00054	COG2983	Belongs to the UPF0260 family
ABTJ_00055	COG2133	pyrroloquinoline quinone binding
ABTJ_00056	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABTJ_00057	COG2116	formate transmembrane transporter activity
ABTJ_00061	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABTJ_00062	COG1335	isochorismatase
ABTJ_00063	COG0385	Bile acid
ABTJ_00064	COG0534	Mate efflux family protein
ABTJ_00065	COG1683	Conserved Protein
ABTJ_00069	COG0625	glutathione transferase activity
ABTJ_00071	COG1113	amino acid transport
ABTJ_00073	COG0523	cobalamin synthesis protein
ABTJ_00075	COG2188	Transcriptional regulator
ABTJ_00081	COG0010	Belongs to the arginase family
ABTJ_00084	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABTJ_00085	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABTJ_00087	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABTJ_00088	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABTJ_00108	COG0534	Mate efflux family protein
ABTJ_00109	COG0436	Aminotransferase
ABTJ_00110	COG2733	membrane
ABTJ_00113	COG2918	glutathione biosynthetic process
ABTJ_00115	COG3501	Rhs element vgr protein
ABTJ_00116	COG0791	NLP P60 protein
ABTJ_00116	COG1388	LysM domain
ABTJ_00120	COG3150	esterase
ABTJ_00122	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_00123	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABTJ_00125	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABTJ_00127	COG2233	PERMEase
ABTJ_00128	COG2351	hydroxyisourate hydrolase activity
ABTJ_00135	COG3706	GGDEF domain
ABTJ_00138	COG1393	Belongs to the ArsC family
ABTJ_00139	COG0708	Exodeoxyribonuclease III
ABTJ_00143	COG0189	ligase activity
ABTJ_00147	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABTJ_00149	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABTJ_00152	COG4942	peptidase
ABTJ_00154	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABTJ_00156	COG2119	membrane
ABTJ_00157	COG4774	siderophore transport
ABTJ_00160	COG4774	siderophore transport
ABTJ_00161	COG0426	domain, Protein
ABTJ_00161	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABTJ_00166	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABTJ_00171	COG1902	pentaerythritol trinitrate reductase activity
ABTJ_00172	COG1519	Transferase
ABTJ_00173	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABTJ_00174	COG0668	transmembrane transport
ABTJ_00176	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABTJ_00177	COG1335	isochorismatase
ABTJ_00178	COG1522	sequence-specific DNA binding
ABTJ_00179	COG3328	transposase activity
ABTJ_00184	COG2198	Histidine kinase
ABTJ_00184	COG2205	protein histidine kinase activity
ABTJ_00184	COG0784	Response regulator, receiver
ABTJ_00185	COG3162	membrane
ABTJ_00186	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABTJ_00188	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABTJ_00190	COG3706	GGDEF domain
ABTJ_00192	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABTJ_00193	COG1309	transcriptional regulator
ABTJ_00197	COG0352	thiamine-phosphate diphosphorylase activity
ABTJ_00197	COG0351	phosphomethylpyrimidine kinase
ABTJ_00197	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABTJ_00199	COG2814	Major facilitator Superfamily
ABTJ_00202	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABTJ_00204	COG1113	amino acid transport
ABTJ_00206	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABTJ_00207	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_00209	COG1335	isochorismatase
ABTJ_00216	COG2814	Major facilitator Superfamily
ABTJ_00217	COG0583	DNA-binding transcription factor activity
ABTJ_00221	COG0667	Aldo Keto reductase
ABTJ_00227	COG1733	regulation of RNA biosynthetic process
ABTJ_00228	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABTJ_00245	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABTJ_00248	COG2329	Antibiotic biosynthesis monooxygenase
ABTJ_00254	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABTJ_00260	COG0427	acetyl-CoA hydrolase
ABTJ_00262	COG0745	RESPONSE REGULATOR receiver
ABTJ_00264	COG0659	secondary active sulfate transmembrane transporter activity
ABTJ_00265	COG4221	oxidoreductase activity
ABTJ_00267	COG0488	(ABC) transporter
ABTJ_00283	COG0833	amino acid
ABTJ_00292	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABTJ_00293	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABTJ_00296	COG2226	methyltransferase
ABTJ_00306	COG0069	glutamate synthase activity
ABTJ_00306	COG0067	glutamate synthase
ABTJ_00306	COG0070	glutamate synthase
ABTJ_00307	COG0493	'glutamate synthase
ABTJ_00309	COG1704	LemA family
ABTJ_00310	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABTJ_00314	COG3307	-O-antigen
ABTJ_00318	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABTJ_00320	COG0194	GDP metabolic process
ABTJ_00330	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABTJ_00334	COG5380	lipid catabolic process
ABTJ_00335	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABTJ_00340	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABTJ_00341	COG0277	FAD linked oxidase domain protein
ABTJ_00343	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABTJ_00344	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABTJ_00347	COG1289	transmembrane transporter activity
ABTJ_00349	COG0628	permease
ABTJ_00356	COG0833	amino acid
ABTJ_00357	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABTJ_00358	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABTJ_00360	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_00368	COG0583	DNA-binding transcription factor activity
ABTJ_00377	COG0517	IMP dehydrogenase activity
ABTJ_00378	COG1983	PspC domain protein
ABTJ_00380	COG1960	acyl-CoA dehydrogenase activity
ABTJ_00383	COG0408	coproporphyrinogen oxidase activity
ABTJ_00387	COG0513	Belongs to the DEAD box helicase family
ABTJ_00388	COG1127	ABC transporter
ABTJ_00389	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABTJ_00391	COG2854	intermembrane phospholipid transfer
ABTJ_00393	COG0598	Magnesium transport protein CorA
ABTJ_00395	COG0494	nUDIX hydrolase
ABTJ_00396	COG1040	competence protein
ABTJ_00397	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABTJ_00401	COG1946	Acyl-CoA thioesterase
ABTJ_00402	COG1301	dicarboxylic acid transport
ABTJ_00405	COG1959	2 iron, 2 sulfur cluster binding
ABTJ_00406	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABTJ_00406	COG1017	nitric oxide dioxygenase activity
ABTJ_00407	COG0433	COG0433 Predicted ATPase
ABTJ_00408	COG0626	cystathionine gamma-synthase activity
ABTJ_00432	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABTJ_00434	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABTJ_00439	COG1960	acyl-CoA dehydrogenase activity
ABTJ_00440	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABTJ_00447	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABTJ_00448	COG0339	signal peptide processing
ABTJ_00449	COG0557	exoribonuclease II activity
ABTJ_00458	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABTJ_00459	COG2169	Transcriptional regulator
ABTJ_00460	COG0697	spore germination
ABTJ_00461	COG1295	ribonuclease BN
ABTJ_00468	COG1702	phosphate starvation-inducible protein PhoH
ABTJ_00470	COG0741	lytic transglycosylase activity
ABTJ_00470	COG0739	heme binding
ABTJ_00470	COG1196	nuclear chromosome segregation
ABTJ_00476	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABTJ_00477	COG1183	phosphatidylcholine synthase activity
ABTJ_00487	COG1960	acyl-CoA dehydrogenase activity
ABTJ_00488	COG1309	transcriptional regulator
ABTJ_00491	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABTJ_00492	COG1960	acyl-CoA dehydrogenase activity
ABTJ_00496	COG2969	positive regulation of protein catabolic process
ABTJ_00498	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABTJ_00501	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABTJ_00502	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABTJ_00506	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABTJ_00508	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABTJ_00509	COG1408	metallophosphoesterase
ABTJ_00511	COG2199	diguanylate cyclase activity
ABTJ_00521	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABTJ_00521	COG3453	Protein conserved in bacteria
ABTJ_00524	COG1607	acyl-coa hydrolase
ABTJ_00530	COG2350	Protein conserved in bacteria
ABTJ_00532	COG0613	PHP domain protein
ABTJ_00533	COG3781	membrane
ABTJ_00535	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABTJ_00536	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABTJ_00538	COG1862	Preprotein translocase
ABTJ_00548	COG2205	protein histidine kinase activity
ABTJ_00549	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABTJ_00553	COG0726	polysaccharide deacetylase
ABTJ_00554	COG0463	Glycosyl transferase, family 2
ABTJ_00555	COG0438	transferase activity, transferring glycosyl groups
ABTJ_00568	COG0625	glutathione transferase activity
ABTJ_00569	COG0583	DNA-binding transcription factor activity
ABTJ_00570	COG1960	acyl-CoA dehydrogenase activity
ABTJ_00571	COG1960	acyl-CoA dehydrogenase activity
ABTJ_00573	COG2205	protein histidine kinase activity
ABTJ_00574	COG0745	RESPONSE REGULATOR receiver
ABTJ_00575	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABTJ_00579	COG2096	Adenosyltransferase
ABTJ_00583	COG0133	tryptophan synthase activity
ABTJ_00590	COG0285	dihydrofolate synthase activity
ABTJ_00594	COG0450	alkyl hydroperoxide reductase
ABTJ_00597	COG0477	Major facilitator Superfamily
ABTJ_00598	COG1272	protein, Hemolysin III
ABTJ_00605	COG0183	Belongs to the thiolase family
ABTJ_00606	COG2207	Transcriptional regulator
ABTJ_00610	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABTJ_00614	COG0183	Belongs to the thiolase family
ABTJ_00616	COG2885	chlorophyll binding
ABTJ_00616	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABTJ_00618	COG1690	Belongs to the RtcB family
ABTJ_00619	COG0833	amino acid
ABTJ_00621	COG2233	PERMEase
ABTJ_00627	COG2094	Belongs to the DNA glycosylase MPG family
ABTJ_00628	COG4772	TonB-dependent receptor
ABTJ_00631	COG4772	TonB-dependent receptor
ABTJ_00632	COG1902	pentaerythritol trinitrate reductase activity
ABTJ_00635	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABTJ_00636	COG0354	folic acid binding
ABTJ_00638	COG3189	MarR family transcriptional regulator
ABTJ_00639	COG2824	Alkylphosphonate utilization operon protein PhnA
ABTJ_00640	COG3422	double-strand break repair
ABTJ_00648	COG0840	transmembrane signaling receptor activity
ABTJ_00652	COG5510	response to toxic substance
ABTJ_00654	COG2832	Protein of unknown function (DUF454)
ABTJ_00655	COG1376	ErfK ybiS ycfS ynhG family protein
ABTJ_00665	COG1289	transmembrane transporter activity
ABTJ_00666	COG2814	Major facilitator Superfamily
ABTJ_00669	COG1115	amino acid carrier protein
ABTJ_00670	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABTJ_00671	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABTJ_00672	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABTJ_00678	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABTJ_00680	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABTJ_00681	COG1077	Cell shape determining protein MreB Mrl
ABTJ_00682	COG1792	Involved in formation and maintenance of cell shape
ABTJ_00683	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABTJ_00684	COG0424	maF-like protein
ABTJ_00685	COG1530	ribonuclease E activity
ABTJ_00687	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABTJ_00691	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABTJ_00696	COG2207	Transcriptional regulator
ABTJ_00700	COG1113	amino acid transport
ABTJ_00701	COG2828	Protein conserved in bacteria
ABTJ_00702	COG0142	geranyltranstransferase activity
ABTJ_00703	COG2315	Protein conserved in bacteria
ABTJ_00706	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABTJ_00710	COG2194	sulfuric ester hydrolase activity
ABTJ_00711	COG0745	RESPONSE REGULATOR receiver
ABTJ_00712	COG0642	Histidine kinase
ABTJ_00714	COG0004	ammonium transporteR
ABTJ_00715	COG0583	DNA-binding transcription factor activity
ABTJ_00719	COG0525	valine-tRNA ligase activity
ABTJ_00721	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_00723	COG0393	Putative heavy-metal-binding
ABTJ_00724	COG0393	Putative heavy-metal-binding
ABTJ_00725	COG1538	Outer membrane efflux protein
ABTJ_00727	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABTJ_00728	COG0671	phosphoesterase, PA-phosphatase related
ABTJ_00733	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABTJ_00736	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABTJ_00736	COG1648	precorrin-2 dehydrogenase activity
ABTJ_00737	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABTJ_00738	COG1733	regulation of RNA biosynthetic process
ABTJ_00740	COG0531	amino acid
ABTJ_00743	COG0321	lipoyl(octanoyl) transferase activity
ABTJ_00744	COG2921	Belongs to the UPF0250 family
ABTJ_00752	COG2009	succinate dehydrogenase
ABTJ_00753	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABTJ_00754	COG1053	succinate dehydrogenase
ABTJ_00755	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABTJ_00758	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABTJ_00762	COG2354	Protein conserved in bacteria
ABTJ_00763	COG2321	neutral zinc metallopeptidase
ABTJ_00774	COG2843	Capsule synthesis protein
ABTJ_00777	COG0589	response to stress
ABTJ_00781	COG0505	Belongs to the CarA family
ABTJ_00786	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABTJ_00787	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABTJ_00797	COG0477	Major facilitator Superfamily
ABTJ_00798	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABTJ_00802	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABTJ_00807	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABTJ_00814	COG0741	lytic transglycosylase activity
ABTJ_00818	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABTJ_00821	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABTJ_00826	COG0778	Nitroreductase
ABTJ_00829	COG1929	Belongs to the glycerate kinase type-1 family
ABTJ_00830	COG0243	molybdopterin cofactor binding
ABTJ_00831	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABTJ_00832	COG3339	Conserved Protein
ABTJ_00834	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABTJ_00838	COG1113	amino acid transport
ABTJ_00840	COG0019	diaminopimelate decarboxylase activity
ABTJ_00842	COG1280	lysine exporter protein (LysE YggA)
ABTJ_00843	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABTJ_00849	COG0463	Glycosyl transferase, family 2
ABTJ_00853	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABTJ_00860	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABTJ_00861	COG1136	(ABC) transporter
ABTJ_00862	COG0658	competence protein
ABTJ_00862	COG2333	competence protein COMEC
ABTJ_00864	COG0616	signal peptide processing
ABTJ_00864	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABTJ_00865	COG0596	Alpha beta hydrolase
ABTJ_00866	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABTJ_00868	COG0628	permease
ABTJ_00875	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABTJ_00879	COG0823	Involved in the tonB-independent uptake of proteins
ABTJ_00883	COG0824	Thioesterase
ABTJ_00884	COG1473	amidohydrolase
ABTJ_00888	COG0047	phosphoribosylformylglycinamidine synthase activity
ABTJ_00888	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABTJ_00889	COG2814	Major facilitator Superfamily
ABTJ_00891	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABTJ_00892	COG1024	Enoyl-CoA hydratase
ABTJ_00893	COG1056	cytidyltransferase-related domain
ABTJ_00893	COG1051	belongs to the nudix hydrolase family
ABTJ_00895	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABTJ_00898	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABTJ_00901	COG4625	pathogenesis
ABTJ_00902	COG0583	DNA-binding transcription factor activity
ABTJ_00903	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABTJ_00904	COG4208	sulfate ABC transporter
ABTJ_00905	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABTJ_00907	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABTJ_00908	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABTJ_00909	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABTJ_00913	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABTJ_00916	COG0681	Belongs to the peptidase S26 family
ABTJ_00919	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABTJ_00921	COG1381	Involved in DNA repair and RecF pathway recombination
ABTJ_00922	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABTJ_00924	COG4221	oxidoreductase activity
ABTJ_00933	COG0556	nucleotide-excision repair
ABTJ_00975	COG5410	chromosome segregation
ABTJ_01014	COG2070	2-Nitropropane dioxygenase
ABTJ_01020	COG1215	transferase activity, transferring glycosyl groups
ABTJ_01023	COG0415	Belongs to the DNA photolyase family
ABTJ_01025	COG1252	NADH dehydrogenase
ABTJ_01026	COG1686	Belongs to the peptidase S11 family
ABTJ_01029	COG1187	pseudouridine synthase activity
ABTJ_01033	COG0477	Major facilitator Superfamily
ABTJ_01034	COG0583	DNA-binding transcription factor activity
ABTJ_01037	COG0612	Peptidase, M16
ABTJ_01042	COG0352	thiamine-phosphate diphosphorylase activity
ABTJ_01049	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABTJ_01052	COG1309	transcriptional regulator
ABTJ_01054	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABTJ_01055	COG0076	glutamate decarboxylase activity
ABTJ_01057	COG1522	sequence-specific DNA binding
ABTJ_01058	COG3961	Belongs to the TPP enzyme family
ABTJ_01059	COG1113	amino acid transport
ABTJ_01060	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABTJ_01061	COG0573	inorganic phosphate transmembrane transporter activity
ABTJ_01063	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABTJ_01064	COG0616	signal peptide processing
ABTJ_01071	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABTJ_01072	COG1686	Belongs to the peptidase S11 family
ABTJ_01077	COG0583	DNA-binding transcription factor activity
ABTJ_01078	COG1067	ATP-dependent peptidase activity
ABTJ_01087	COG1966	Carbon starvation protein
ABTJ_01088	COG2879	small protein
ABTJ_01095	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ABTJ_01095	COG2508	Transcriptional regulator
ABTJ_01099	COG1113	amino acid transport
ABTJ_01100	COG0583	DNA-binding transcription factor activity
ABTJ_01101	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABTJ_01102	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABTJ_01105	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABTJ_01106	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABTJ_01106	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABTJ_01113	COG2814	Major facilitator Superfamily
ABTJ_01114	COG4948	Mandelate Racemase Muconate Lactonizing
ABTJ_01116	COG1309	transcriptional regulator
ABTJ_01119	COG1741	Belongs to the pirin family
ABTJ_01122	COG2964	Protein conserved in bacteria
ABTJ_01125	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABTJ_01128	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABTJ_01129	COG4605	iron ion homeostasis
ABTJ_01130	COG4604	ABC transporter, ATP-binding protein
ABTJ_01131	COG4607	ABC-type enterochelin transport system periplasmic component
ABTJ_01132	COG4774	siderophore transport
ABTJ_01134	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABTJ_01135	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABTJ_01136	COG3433	isochorismatase activity
ABTJ_01136	COG1535	isochorismatase
ABTJ_01139	COG1132	(ABC) transporter
ABTJ_01141	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABTJ_01143	COG1169	isochorismate synthase
ABTJ_01146	COG3739	integral membrane protein
ABTJ_01154	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABTJ_01160	COG0308	aminopeptidase N
ABTJ_01161	COG0512	Glutamine amidotransferase of anthranilate synthase
ABTJ_01163	COG3104	oligopeptide transport
ABTJ_01166	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABTJ_01173	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABTJ_01174	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABTJ_01175	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABTJ_01179	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABTJ_01180	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABTJ_01181	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABTJ_01184	COG1960	acyl-CoA dehydrogenase activity
ABTJ_01185	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABTJ_01186	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABTJ_01189	COG2223	nitrite transmembrane transporter activity
ABTJ_01191	COG0024	Methionine aminopeptidase
ABTJ_01192	COG0052	Belongs to the universal ribosomal protein uS2 family
ABTJ_01195	COG2207	Transcriptional regulator
ABTJ_01200	COG2951	lytic endotransglycosylase activity
ABTJ_01201	COG0772	Belongs to the SEDS family
ABTJ_01204	COG0842	Transport permease protein
ABTJ_01205	COG1131	(ABC) transporter
ABTJ_01212	COG1538	Outer membrane efflux protein
ABTJ_01214	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABTJ_01218	COG4215	(ABC) transporter
ABTJ_01219	COG4160	amino acid transport
ABTJ_01220	COG4598	ABC transporter
ABTJ_01222	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABTJ_01224	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABTJ_01227	COG1720	tRNA m6t6A37 methyltransferase activity
ABTJ_01231	COG0745	RESPONSE REGULATOR receiver
ABTJ_01232	COG0642	Histidine kinase
ABTJ_01234	COG0494	nUDIX hydrolase
ABTJ_01236	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABTJ_01237	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABTJ_01238	COG3139	Protein of unknown function (DUF1315)
ABTJ_01239	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABTJ_01240	COG1301	dicarboxylic acid transport
ABTJ_01241	COG1960	acyl-CoA dehydrogenase activity
ABTJ_01242	COG2819	hydrolase of the alpha beta superfamily
ABTJ_01244	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABTJ_01246	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABTJ_01247	COG1234	tRNA 3'-trailer cleavage
ABTJ_01253	COG2363	Small membrane protein
ABTJ_01257	COG0513	Belongs to the DEAD box helicase family
ABTJ_01259	COG0778	Nitroreductase
ABTJ_01265	COG1286	toxin biosynthetic process
ABTJ_01270	COG4783	chaperone-mediated protein folding
ABTJ_01271	COG1610	YqeY-like protein
ABTJ_01272	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABTJ_01292	COG3111	PFAM Bacterial OB fold (BOF) protein
ABTJ_01297	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABTJ_01298	COG0786	glutamate:sodium symporter activity
ABTJ_01300	COG2186	Transcriptional regulator
ABTJ_01310	COG0477	Major facilitator Superfamily
ABTJ_01314	COG2985	domain, Protein
ABTJ_01316	COG2995	paraquat-inducible protein a
ABTJ_01317	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABTJ_01317	COG3008	intermembrane lipid transfer
ABTJ_01319	COG1794	racemase activity, acting on amino acids and derivatives
ABTJ_01323	COG3316	Transposase and inactivated derivatives
ABTJ_01336	COG3173	Aminoglycoside phosphotransferase
ABTJ_01338	COG2433	Pfam Transposase IS66
ABTJ_01343	COG3316	Transposase and inactivated derivatives
ABTJ_01346	COG1301	dicarboxylic acid transport
ABTJ_01350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABTJ_01351	COG2011	ABC-type metal ion transport system permease component
ABTJ_01352	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABTJ_01353	COG1464	Belongs to the NlpA lipoprotein family
ABTJ_01354	COG0151	Belongs to the GarS family
ABTJ_01355	COG0138	bifunctional purine biosynthesis protein purh
ABTJ_01356	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABTJ_01362	COG2308	Evidence 4 Homologs of previously reported genes of
ABTJ_01364	COG1305	Transglutaminase-like
ABTJ_01366	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABTJ_01367	COG0305	Participates in initiation and elongation during chromosome replication
ABTJ_01372	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABTJ_01374	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABTJ_01375	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABTJ_01380	COG1649	PFAM Uncharacterised BCR, COG1649
ABTJ_01380	COG0726	polysaccharide deacetylase
ABTJ_01381	COG1215	transferase activity, transferring glycosyl groups
ABTJ_01382	COG3658	cytochrome
ABTJ_01384	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABTJ_01387	COG0583	DNA-binding transcription factor activity
ABTJ_01391	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABTJ_01392	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABTJ_01395	COG1960	acyl-CoA dehydrogenase activity
ABTJ_01396	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABTJ_01397	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABTJ_01402	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABTJ_01403	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABTJ_01405	COG2205	protein histidine kinase activity
ABTJ_01406	COG0745	RESPONSE REGULATOR receiver
ABTJ_01407	COG0174	glutamine synthetase
ABTJ_01411	COG0729	surface antigen
ABTJ_01416	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABTJ_01417	COG2814	Major facilitator Superfamily
ABTJ_01420	COG0583	DNA-binding transcription factor activity
ABTJ_01423	COG1187	pseudouridine synthase activity
ABTJ_01427	COG0802	atpase or kinase
ABTJ_01428	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABTJ_01430	COG1923	regulation of RNA biosynthetic process
ABTJ_01431	COG0697	spore germination
ABTJ_01438	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABTJ_01438	COG0519	Catalyzes the synthesis of GMP from XMP
ABTJ_01439	COG4302	ethanolamine ammonia-lyase activity
ABTJ_01440	COG4303	Ethanolamine ammonia lyase large subunit
ABTJ_01441	COG0531	amino acid
ABTJ_01445	COG1454	alcohol dehydrogenase
ABTJ_01446	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABTJ_01448	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ABTJ_01452	COG0308	aminopeptidase N
ABTJ_01454	COG4221	oxidoreductase activity
ABTJ_01456	COG1605	Chorismate mutase
ABTJ_01459	COG1309	transcriptional regulator
ABTJ_01461	COG0668	transmembrane transport
ABTJ_01469	COG4773	Receptor
ABTJ_01473	COG0488	(ABC) transporter
ABTJ_01474	COG0589	response to stress
ABTJ_01479	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABTJ_01481	COG3135	benzoate transporter
ABTJ_01482	COG1522	sequence-specific DNA binding
ABTJ_01485	COG0583	DNA-binding transcription factor activity
ABTJ_01487	COG0183	Belongs to the thiolase family
ABTJ_01493	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABTJ_01496	COG0824	Thioesterase
ABTJ_01497	COG1454	alcohol dehydrogenase
ABTJ_01499	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABTJ_01503	COG0069	glutamate synthase activity
ABTJ_01516	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABTJ_01517	COG4197	protein conserved in bacteria, prophage-related
ABTJ_01571	COG2814	Major facilitator Superfamily
ABTJ_01574	COG0511	ligase activity, forming carbon-carbon bonds
ABTJ_01577	COG1116	anion transmembrane transporter activity
ABTJ_01577	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABTJ_01578	COG0745	RESPONSE REGULATOR receiver
ABTJ_01580	COG2146	nitrite reductase [NAD(P)H] activity
ABTJ_01580	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABTJ_01581	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABTJ_01582	COG0243	molybdopterin cofactor binding
ABTJ_01584	COG0243	molybdopterin cofactor binding
ABTJ_01585	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABTJ_01588	COG0315	cyclic pyranopterin monophosphate synthase activity
ABTJ_01588	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABTJ_01589	COG0303	'Molybdopterin
ABTJ_01591	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABTJ_01592	COG0697	spore germination
ABTJ_01596	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABTJ_01597	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABTJ_01609	COG2204	response regulator
ABTJ_01610	COG3852	Histidine kinase
ABTJ_01614	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABTJ_01615	COG0575	Belongs to the CDS family
ABTJ_01622	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABTJ_01625	COG2137	regulation of response to DNA damage stimulus
ABTJ_01627	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABTJ_01628	COG1011	Hydrolase
ABTJ_01633	COG1522	sequence-specific DNA binding
ABTJ_01635	COG1113	amino acid transport
ABTJ_01638	COG0659	secondary active sulfate transmembrane transporter activity
ABTJ_01639	COG2135	peptidase activity
ABTJ_01642	COG5001	Diguanylate cyclase
ABTJ_01642	COG3300	MHYT domain
ABTJ_01647	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABTJ_01647	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABTJ_01647	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABTJ_01648	COG1105	Belongs to the carbohydrate kinase PfkB family
ABTJ_01649	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABTJ_01649	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABTJ_01655	COG0024	Methionine aminopeptidase
ABTJ_01656	COG0583	DNA-binding transcription factor activity
ABTJ_01658	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABTJ_01659	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABTJ_01660	COG0516	GMP reductase activity
ABTJ_01660	COG0517	IMP dehydrogenase activity
ABTJ_01665	COG0552	protein localization to endoplasmic reticulum
ABTJ_01667	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABTJ_01670	COG4890	Cyd operon protein YbgT
ABTJ_01671	COG1294	oxidase, subunit
ABTJ_01674	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABTJ_01676	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABTJ_01677	COG4774	siderophore transport
ABTJ_01680	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABTJ_01681	COG0569	domain protein
ABTJ_01682	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABTJ_01688	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABTJ_01689	COG0542	response to heat
ABTJ_01691	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABTJ_01694	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABTJ_01694	COG1902	pentaerythritol trinitrate reductase activity
ABTJ_01703	COG2323	membrane
ABTJ_01704	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABTJ_01706	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABTJ_01707	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABTJ_01708	COG0183	Belongs to the thiolase family
ABTJ_01709	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABTJ_01710	COG0596	Alpha beta hydrolase
ABTJ_01711	COG2271	Major facilitator Superfamily
ABTJ_01712	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABTJ_01713	COG3485	protocatechuate 3,4-dioxygenase
ABTJ_01714	COG3485	protocatechuate 3,4-dioxygenase
ABTJ_01715	COG0710	3-dehydroquinate dehydratase activity
ABTJ_01716	COG3420	alginic acid biosynthetic process
ABTJ_01717	COG3659	wide pore channel activity
ABTJ_01718	COG4993	Dehydrogenase
ABTJ_01720	COG2391	methyltransferase activity
ABTJ_01723	COG1414	Transcriptional regulator
ABTJ_01724	COG0583	DNA-binding transcription factor activity
ABTJ_01725	COG1960	acyl-CoA dehydrogenase activity
ABTJ_01730	COG2814	Major facilitator Superfamily
ABTJ_01732	COG0154	amidase activity
ABTJ_01736	COG4638	Rieske (2fe-2S)
ABTJ_01738	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_01740	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABTJ_01742	COG3733	amine oxidase
ABTJ_01744	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_01746	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABTJ_01747	COG0183	Belongs to the thiolase family
ABTJ_01748	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABTJ_01749	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABTJ_01751	COG4829	muconolactone delta-isomerase
ABTJ_01752	COG4948	Mandelate Racemase Muconate Lactonizing
ABTJ_01753	COG0583	DNA-binding transcription factor activity
ABTJ_01755	COG2186	Transcriptional regulator
ABTJ_01759	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_01763	COG1960	acyl-CoA dehydrogenase activity
ABTJ_01764	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_01765	COG3829	transcription factor binding
ABTJ_01767	COG3162	membrane
ABTJ_01770	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_01774	COG0753	catalase activity
ABTJ_01778	COG1846	Transcriptional regulator
ABTJ_01779	COG1902	pentaerythritol trinitrate reductase activity
ABTJ_01779	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABTJ_01781	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ABTJ_01787	COG1309	transcriptional regulator
ABTJ_01789	COG1335	isochorismatase
ABTJ_01790	COG0583	DNA-binding transcription factor activity
ABTJ_01792	COG0475	glutathione-regulated potassium exporter activity
ABTJ_01792	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABTJ_01794	COG1473	amidohydrolase
ABTJ_01796	COG2831	hemolysin activation secretion protein
ABTJ_01797	COG3210	domain, Protein
ABTJ_01806	COG0583	DNA-binding transcription factor activity
ABTJ_01811	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABTJ_01812	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABTJ_01816	COG1566	PFAM secretion protein HlyD family protein
ABTJ_01819	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_01820	COG0129	dihydroxy-acid dehydratase activity
ABTJ_01822	COG0583	DNA-binding transcription factor activity
ABTJ_01826	COG2084	Dehydrogenase
ABTJ_01827	COG2207	Transcriptional regulator
ABTJ_01830	COG1064	alcohol dehydrogenase
ABTJ_01833	COG1120	ATPase activity
ABTJ_01837	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABTJ_01861	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABTJ_01872	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_01875	COG2207	Transcriptional regulator
ABTJ_01877	COG2205	protein histidine kinase activity
ABTJ_01878	COG0745	RESPONSE REGULATOR receiver
ABTJ_01879	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABTJ_01880	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABTJ_01881	COG1538	Outer membrane efflux protein
ABTJ_01883	COG2072	flavoprotein involved in K transport
ABTJ_01887	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABTJ_01891	COG3539	Fimbrial protein
ABTJ_01898	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABTJ_01900	COG0753	catalase activity
ABTJ_01903	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABTJ_01915	COG1535	isochorismatase
ABTJ_01915	COG3433	isochorismatase activity
ABTJ_01916	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_01917	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABTJ_01918	COG4149	molybdate abc transporter
ABTJ_01919	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABTJ_01921	COG4638	Rieske (2fe-2S)
ABTJ_01922	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABTJ_01923	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABTJ_01923	COG0543	2 iron, 2 sulfur cluster binding
ABTJ_01926	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABTJ_01928	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_01929	COG0412	Dienelactone hydrolase
ABTJ_01931	COG2207	Transcriptional regulator
ABTJ_01934	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_01935	COG2610	gluconate transmembrane transporter activity
ABTJ_01937	COG0583	DNA-binding transcription factor activity
ABTJ_01939	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABTJ_01940	COG2031	fatty acid transporter
ABTJ_01941	COG0183	Belongs to the thiolase family
ABTJ_01942	COG0583	DNA-binding transcription factor activity
ABTJ_01943	COG0583	DNA-binding transcription factor activity
ABTJ_01946	COG1027	Aspartate ammonia-lyase
ABTJ_01948	COG0477	Major facilitator Superfamily
ABTJ_01952	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABTJ_01953	COG4521	taurine ABC transporter
ABTJ_01958	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABTJ_01959	COG1733	regulation of RNA biosynthetic process
ABTJ_01960	COG2207	Transcriptional regulator
ABTJ_01960	COG3708	Transcriptional regulator
ABTJ_01963	COG0730	response to heat
ABTJ_01965	COG3453	Protein conserved in bacteria
ABTJ_01965	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABTJ_01967	COG3781	membrane
ABTJ_01968	COG1063	alcohol dehydrogenase
ABTJ_01970	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABTJ_01971	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABTJ_01972	COG0022	dehydrogenase e1 component
ABTJ_01973	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABTJ_01974	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABTJ_01977	COG3706	GGDEF domain
ABTJ_01980	COG0133	tryptophan synthase activity
ABTJ_01982	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABTJ_01989	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABTJ_01994	COG2226	methyltransferase
ABTJ_02005	COG0842	Transport permease protein
ABTJ_02006	COG0842	Transport permease protein
ABTJ_02007	COG1131	(ABC) transporter
ABTJ_02010	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABTJ_02011	COG4773	Receptor
ABTJ_02015	COG0730	response to heat
ABTJ_02016	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABTJ_02020	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABTJ_02023	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABTJ_02031	COG4264	IucA IucC family
ABTJ_02032	COG4264	IucA IucC family
ABTJ_02036	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABTJ_02039	COG1960	acyl-CoA dehydrogenase activity
ABTJ_02040	COG1960	acyl-CoA dehydrogenase activity
ABTJ_02041	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABTJ_02042	COG2207	Transcriptional regulator
ABTJ_02043	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABTJ_02044	COG0776	regulation of translation
ABTJ_02049	COG0822	iron-sulfur transferase activity
ABTJ_02050	COG0316	Belongs to the HesB IscA family
ABTJ_02056	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABTJ_02060	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABTJ_02061	COG0702	epimerase
ABTJ_02068	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABTJ_02070	COG0339	signal peptide processing
ABTJ_02080	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABTJ_02081	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABTJ_02087	COG0776	regulation of translation
ABTJ_02091	COG0590	tRNA wobble adenosine to inosine editing
ABTJ_02098	COG2165	general secretion pathway protein
ABTJ_02101	COG0084	hydrolase, TatD family'
ABTJ_02105	COG1663	tetraacyldisaccharide 4'-kinase activity
ABTJ_02106	COG1132	(ABC) transporter
ABTJ_02108	COG0811	peptide transport
ABTJ_02109	COG1475	DNA binding
ABTJ_02110	COG1192	Involved in chromosome partitioning
ABTJ_02112	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABTJ_02115	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABTJ_02116	COG0191	fructose-bisphosphate aldolase activity
ABTJ_02120	COG0424	maF-like protein
ABTJ_02121	COG2850	peptidyl-arginine hydroxylation
ABTJ_02123	COG0640	Transcriptional regulator
ABTJ_02125	COG3619	membrane
ABTJ_02126	COG3122	Protein conserved in bacteria
ABTJ_02127	COG1132	(ABC) transporter
ABTJ_02131	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABTJ_02132	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABTJ_02134	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABTJ_02134	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABTJ_02134	COG0506	proline dehydrogenase activity
ABTJ_02135	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABTJ_02138	COG3698	Phosphodiester glycosidase
ABTJ_02140	COG2353	YceI-like domain
ABTJ_02142	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABTJ_02151	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABTJ_02151	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABTJ_02156	COG3539	Fimbrial protein
ABTJ_02157	COG3121	Chaperone
ABTJ_02162	COG0697	spore germination
ABTJ_02164	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABTJ_02166	COG0583	DNA-binding transcription factor activity
ABTJ_02171	COG1309	transcriptional regulator
ABTJ_02174	COG1522	sequence-specific DNA binding
ABTJ_02176	COG1126	abc transporter atp-binding protein
ABTJ_02177	COG0765	amino acid transport
ABTJ_02178	COG0765	amino acid transport
ABTJ_02184	COG1464	Belongs to the NlpA lipoprotein family
ABTJ_02186	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABTJ_02187	COG2011	ABC-type metal ion transport system permease component
ABTJ_02188	COG0012	GTP binding
ABTJ_02193	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABTJ_02201	COG0386	Belongs to the glutathione peroxidase family
ABTJ_02203	COG0436	Aminotransferase
ABTJ_02211	COG3634	alkyl hydroperoxide reductase activity
ABTJ_02214	COG0583	DNA-binding transcription factor activity
ABTJ_02215	COG0798	PFAM Bile acid sodium symporter
ABTJ_02216	COG0640	Transcriptional regulator
ABTJ_02222	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABTJ_02224	COG0583	DNA-binding transcription factor activity
ABTJ_02226	COG1953	Uracil, thiamine, allantoin
ABTJ_02228	COG2175	clavaminate synthase activity
ABTJ_02229	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABTJ_02230	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABTJ_02231	COG4521	taurine ABC transporter
ABTJ_02234	COG0477	Major facilitator Superfamily
ABTJ_02238	COG1271	oxidase subunit
ABTJ_02239	COG1294	oxidase, subunit
ABTJ_02241	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABTJ_02245	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABTJ_02249	COG3052	prosthetic group binding
ABTJ_02250	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABTJ_02252	COG2814	Major facilitator Superfamily
ABTJ_02256	COG1346	cytolysis
ABTJ_02258	COG0583	DNA-binding transcription factor activity
ABTJ_02259	COG0625	glutathione transferase activity
ABTJ_02260	COG0625	glutathione transferase activity
ABTJ_02261	COG0583	DNA-binding transcription factor activity
ABTJ_02264	COG1045	serine acetyltransferase
ABTJ_02265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABTJ_02266	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABTJ_02267	COG1280	lysine exporter protein (LysE YggA)
ABTJ_02269	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABTJ_02270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABTJ_02271	COG1126	abc transporter atp-binding protein
ABTJ_02272	COG0765	amino acid transport
ABTJ_02273	COG0765	amino acid transport
ABTJ_02276	COG2205	protein histidine kinase activity
ABTJ_02276	COG0784	Response regulator, receiver
ABTJ_02280	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABTJ_02284	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_02295	COG0583	DNA-binding transcription factor activity
ABTJ_02299	COG0318	PFAM AMP-dependent synthetase and ligase
ABTJ_02300	COG1309	transcriptional regulator
ABTJ_02301	COG1960	acyl-CoA dehydrogenase activity
ABTJ_02302	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABTJ_02303	COG1024	Enoyl-CoA hydratase
ABTJ_02306	COG0583	DNA-binding transcription factor activity
ABTJ_02309	COG1960	acyl-CoA dehydrogenase activity
ABTJ_02311	COG2814	Major facilitator Superfamily
ABTJ_02313	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABTJ_02314	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABTJ_02315	COG2814	Major facilitator Superfamily
ABTJ_02316	COG1960	acyl-CoA dehydrogenase activity
ABTJ_02317	COG1024	Enoyl-CoA hydratase
ABTJ_02318	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_02319	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABTJ_02320	COG0183	Belongs to the thiolase family
ABTJ_02322	COG2814	Major facilitator Superfamily
ABTJ_02324	COG1024	Enoyl-CoA hydratase
ABTJ_02327	COG1960	acyl-CoA dehydrogenase activity
ABTJ_02328	COG2814	Major facilitator Superfamily
ABTJ_02329	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABTJ_02330	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABTJ_02333	COG3842	ATPase activity
ABTJ_02334	COG1840	ABC-type Fe3 transport system, periplasmic component
ABTJ_02336	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABTJ_02337	COG1414	Transcriptional regulator
ABTJ_02339	COG0583	DNA-binding transcription factor activity
ABTJ_02340	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABTJ_02341	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_02343	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABTJ_02344	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_02345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABTJ_02346	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABTJ_02347	COG2267	carboxylic ester hydrolase activity
ABTJ_02351	COG3038	cytochrome b561
ABTJ_02352	COG0753	catalase activity
ABTJ_02359	COG2050	protein possibly involved in aromatic compounds catabolism
ABTJ_02361	COG3327	negative regulation of DNA-templated transcription, initiation
ABTJ_02362	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABTJ_02363	COG0183	Belongs to the thiolase family
ABTJ_02364	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABTJ_02365	COG1024	Enoyl-CoA hydratase
ABTJ_02366	COG1024	Enoyl-CoA hydratase
ABTJ_02367	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABTJ_02368	COG2151	metal-sulfur cluster biosynthetic enzyme
ABTJ_02369	COG3396	Phenylacetate-CoA oxygenase
ABTJ_02370	COG3460	Phenylacetate-CoA oxygenase
ABTJ_02371	COG3396	Phenylacetate-CoA oxygenase
ABTJ_02372	COG2030	dehydratase
ABTJ_02372	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_02373	COG1760	l-serine dehydratase
ABTJ_02374	COG0531	amino acid
ABTJ_02375	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_02378	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABTJ_02380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABTJ_02384	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABTJ_02387	COG0789	Transcriptional regulator
ABTJ_02391	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABTJ_02394	COG2807	transmembrane transport
ABTJ_02395	COG0590	tRNA wobble adenosine to inosine editing
ABTJ_02397	COG0583	DNA-binding transcription factor activity
ABTJ_02405	COG2885	chlorophyll binding
ABTJ_02405	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABTJ_02418	COG1116	anion transmembrane transporter activity
ABTJ_02419	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABTJ_02421	COG0864	Transcriptional regulator
ABTJ_02424	COG1733	regulation of RNA biosynthetic process
ABTJ_02425	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABTJ_02426	COG0439	Biotin carboxylase
ABTJ_02430	COG1063	alcohol dehydrogenase
ABTJ_02432	COG1309	transcriptional regulator
ABTJ_02437	COG0038	chloride channel
ABTJ_02438	COG4770	biotin carboxylase activity
ABTJ_02443	COG1914	H( )-stimulated, divalent metal cation uptake system
ABTJ_02444	COG0583	DNA-binding transcription factor activity
ABTJ_02447	COG3209	COG3209 Rhs family protein
ABTJ_02448	COG3501	Rhs element vgr protein
ABTJ_02453	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABTJ_02457	COG2814	Major facilitator Superfamily
ABTJ_02461	COG1560	Kdo2-lipid A biosynthetic process
ABTJ_02463	COG5006	permease, DMT superfamily
ABTJ_02464	COG1522	sequence-specific DNA binding
ABTJ_02467	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABTJ_02475	COG1538	Outer membrane efflux protein
ABTJ_02476	COG1137	ATPase activity
ABTJ_02477	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABTJ_02479	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABTJ_02480	COG0517	IMP dehydrogenase activity
ABTJ_02480	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ABTJ_02487	COG1733	regulation of RNA biosynthetic process
ABTJ_02488	COG2814	Major facilitator Superfamily
ABTJ_02495	COG1278	Cold shock
ABTJ_02496	COG1280	lysine exporter protein (LysE YggA)
ABTJ_02503	COG1570	exodeoxyribonuclease VII activity
ABTJ_02513	COG0583	DNA-binding transcription factor activity
ABTJ_02514	COG4638	Rieske (2fe-2S)
ABTJ_02515	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABTJ_02516	COG0633	Ferredoxin
ABTJ_02516	COG0543	2 iron, 2 sulfur cluster binding
ABTJ_02517	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_02518	COG3135	benzoate transporter
ABTJ_02519	COG2814	Major facilitator Superfamily
ABTJ_02522	COG1643	Atp-dependent helicase
ABTJ_02523	COG0450	alkyl hydroperoxide reductase
ABTJ_02525	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABTJ_02527	COG3634	alkyl hydroperoxide reductase activity
ABTJ_02531	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABTJ_02532	COG0625	glutathione transferase activity
ABTJ_02534	COG2885	chlorophyll binding
ABTJ_02544	COG1765	OsmC-like protein
ABTJ_02548	COG0667	Aldo Keto reductase
ABTJ_02551	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABTJ_02553	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABTJ_02557	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABTJ_02559	COG3038	cytochrome b561
ABTJ_02560	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABTJ_02561	COG2252	PERMEase
ABTJ_02563	COG2072	flavoprotein involved in K transport
ABTJ_02566	COG1741	Belongs to the pirin family
ABTJ_02567	COG1309	transcriptional regulator
ABTJ_02569	COG0300	oxidoreductase activity
ABTJ_02570	COG2072	flavoprotein involved in K transport
ABTJ_02571	COG3316	Transposase and inactivated derivatives
ABTJ_02584	COG3316	Transposase and inactivated derivatives
ABTJ_02585	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABTJ_02587	COG3316	Transposase and inactivated derivatives
ABTJ_02588	COG1113	amino acid transport
ABTJ_02592	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_02596	COG0531	amino acid
ABTJ_02598	COG1113	amino acid transport
ABTJ_02606	COG3209	COG3209 Rhs family protein
ABTJ_02607	COG3501	Rhs element vgr protein
ABTJ_02611	COG4269	membrane
ABTJ_02614	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABTJ_02614	COG1902	pentaerythritol trinitrate reductase activity
ABTJ_02616	COG3706	GGDEF domain
ABTJ_02616	COG2203	Gaf domain
ABTJ_02616	COG4251	negative regulation of phosphorylation
ABTJ_02616	COG5001	Diguanylate cyclase
ABTJ_02618	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABTJ_02622	COG4172	Belongs to the ABC transporter superfamily
ABTJ_02623	COG4239	(ABC) transporter, permease
ABTJ_02624	COG4174	ABC transporter (Permease)
ABTJ_02626	COG0741	lytic transglycosylase activity
ABTJ_02626	COG1388	LysM domain
ABTJ_02626	COG0741	lytic transglycosylase activity
ABTJ_02626	COG1388	LysM domain
ABTJ_02627	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABTJ_02635	COG0583	DNA-binding transcription factor activity
ABTJ_02636	COG1279	arginine transmembrane transporter activity
ABTJ_02640	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABTJ_02641	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABTJ_02642	COG0006	proline dipeptidase activity
ABTJ_02658	COG0739	heme binding
ABTJ_02658	COG0741	lytic transglycosylase activity
ABTJ_02658	COG1196	nuclear chromosome segregation
ABTJ_02670	COG4695	Portal protein
ABTJ_02690	COG0305	Participates in initiation and elongation during chromosome replication
ABTJ_02694	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABTJ_02705	COG2194	sulfuric ester hydrolase activity
ABTJ_02714	COG0739	heme binding
ABTJ_02778	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABTJ_02783	COG3384	dioxygenase
ABTJ_02785	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABTJ_02786	COG2878	Part of a membrane complex involved in electron transport
ABTJ_02787	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABTJ_02791	COG0768	penicillin binding
ABTJ_02792	COG0742	ribosomal rna small subunit methyltransferase
ABTJ_02795	COG0830	nickel cation binding
ABTJ_02797	COG0804	urea catabolic process
ABTJ_02805	COG1253	flavin adenine dinucleotide binding
ABTJ_02806	COG2851	Citrate transporter
ABTJ_02816	COG1773	rubredoxin
ABTJ_02817	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABTJ_02819	COG0583	DNA-binding transcription factor activity
ABTJ_02824	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABTJ_02825	COG4181	ATPase activity
ABTJ_02834	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABTJ_02838	COG0306	phosphate transporter
ABTJ_02840	COG3958	Transketolase
ABTJ_02841	COG3959	Transketolase, thiamine diphosphate binding domain
ABTJ_02842	COG2271	Major facilitator Superfamily
ABTJ_02843	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_02844	COG0583	DNA-binding transcription factor activity
ABTJ_02847	COG2223	nitrite transmembrane transporter activity
ABTJ_02848	COG2207	Transcriptional regulator
ABTJ_02849	COG2066	Belongs to the glutaminase family
ABTJ_02850	COG0242	peptide deformylase activity
ABTJ_02851	COG0477	Major facilitator Superfamily
ABTJ_02853	COG0028	Belongs to the TPP enzyme family
ABTJ_02856	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_02857	COG2267	carboxylic ester hydrolase activity
ABTJ_02859	COG2271	Major facilitator Superfamily
ABTJ_02860	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABTJ_02862	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_02866	COG1414	Transcriptional regulator
ABTJ_02869	COG1024	Enoyl-CoA hydratase
ABTJ_02871	COG1215	transferase activity, transferring glycosyl groups
ABTJ_02872	COG0726	polysaccharide deacetylase
ABTJ_02872	COG1649	PFAM Uncharacterised BCR, COG1649
ABTJ_02874	COG4681	YaeQ
ABTJ_02876	COG0523	cobalamin synthesis protein
ABTJ_02878	COG1607	acyl-coa hydrolase
ABTJ_02880	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABTJ_02881	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABTJ_02882	COG1309	transcriptional regulator
ABTJ_02887	COG2040	homocysteine
ABTJ_02888	COG0531	amino acid
ABTJ_02893	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABTJ_02894	COG0477	Major facilitator Superfamily
ABTJ_02902	COG0405	Gamma-glutamyltransferase
ABTJ_02903	COG2814	Major facilitator Superfamily
ABTJ_02905	COG2050	protein possibly involved in aromatic compounds catabolism
ABTJ_02908	COG1090	epimerase
ABTJ_02912	COG0420	3'-5' exonuclease activity
ABTJ_02917	COG0735	belongs to the Fur family
ABTJ_02918	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABTJ_02922	COG0121	glutamine amidotransferase
ABTJ_02925	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABTJ_02927	COG0210	DNA helicase
ABTJ_02929	COG2885	chlorophyll binding
ABTJ_02930	COG0204	Acyl-transferase
ABTJ_02933	COG2894	cell division
ABTJ_02937	COG1280	lysine exporter protein (LysE YggA)
ABTJ_02938	COG1674	ftsk spoiiie
ABTJ_02938	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABTJ_02939	COG0492	ferredoxin-NADP+ reductase activity
ABTJ_02940	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABTJ_02942	COG0456	acetyltransferase
ABTJ_02954	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABTJ_02954	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABTJ_02958	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_02962	COG0473	3-isopropylmalate dehydrogenase activity
ABTJ_02963	COG0583	DNA-binding transcription factor activity
ABTJ_02967	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABTJ_02972	COG0564	pseudouridine synthase activity
ABTJ_02974	COG0358	DNA primase activity
ABTJ_02977	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABTJ_02983	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABTJ_02990	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABTJ_02992	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABTJ_02992	COG0352	thiamine-phosphate diphosphorylase activity
ABTJ_02992	COG0351	phosphomethylpyrimidine kinase
ABTJ_02993	COG1652	LysM domain
ABTJ_02998	COG1399	metal-binding, possibly nucleic acid-binding protein
ABTJ_02999	COG3101	peptidyl-lysine hydroxylation
ABTJ_03000	COG0009	L-threonylcarbamoyladenylate synthase
ABTJ_03001	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABTJ_03002	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABTJ_03005	COG4106	trans-aconitate 2-methyltransferase activity
ABTJ_03008	COG2226	methyltransferase
ABTJ_03008	COG0596	Alpha beta hydrolase
ABTJ_03008	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABTJ_03009	COG1877	trehalose-phosphatase activity
ABTJ_03010	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABTJ_03011	COG2223	nitrite transmembrane transporter activity
ABTJ_03015	COG1196	nuclear chromosome segregation
ABTJ_03017	COG0730	response to heat
ABTJ_03020	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABTJ_03023	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABTJ_03033	COG0489	protein tyrosine kinase activity
ABTJ_03035	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABTJ_03035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABTJ_03041	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABTJ_03042	COG2081	HI0933 family
ABTJ_03044	COG0668	transmembrane transport
ABTJ_03048	COG0583	DNA-binding transcription factor activity
ABTJ_03052	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABTJ_03053	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABTJ_03059	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABTJ_03066	COG2205	protein histidine kinase activity
ABTJ_03067	COG0745	RESPONSE REGULATOR receiver
ABTJ_03070	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABTJ_03071	COG2205	protein histidine kinase activity
ABTJ_03085	COG4993	Dehydrogenase
ABTJ_03089	COG0384	phenazine biosynthesis protein PhzF
ABTJ_03094	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABTJ_03095	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABTJ_03097	COG0583	DNA-binding transcription factor activity
ABTJ_03101	COG1473	amidohydrolase
ABTJ_03103	COG0583	DNA-binding transcription factor activity
ABTJ_03106	COG0583	DNA-binding transcription factor activity
ABTJ_03107	COG1053	succinate dehydrogenase
ABTJ_03109	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABTJ_03110	COG2814	Major facilitator Superfamily
ABTJ_03111	COG1960	acyl-CoA dehydrogenase activity
ABTJ_03112	COG0583	DNA-binding transcription factor activity
ABTJ_03113	COG1063	alcohol dehydrogenase
ABTJ_03119	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABTJ_03120	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABTJ_03121	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABTJ_03124	COG3667	copper resistance
ABTJ_03125	COG2132	Multicopper oxidase
ABTJ_03127	COG0561	phosphatase activity
ABTJ_03128	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABTJ_03133	COG1214	PFAM Peptidase M22, glycoprotease
ABTJ_03144	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABTJ_03146	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABTJ_03147	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABTJ_03148	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABTJ_03161	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABTJ_03163	COG1846	Transcriptional regulator
ABTJ_03164	COG1764	response to oxidative stress
ABTJ_03172	COG0037	tRNA processing
ABTJ_03174	COG0248	Ppx GppA phosphatase
ABTJ_03179	COG0072	phenylalanine-tRNA ligase activity
ABTJ_03184	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABTJ_03187	COG1238	metal cluster binding
ABTJ_03188	COG0625	glutathione transferase activity
ABTJ_03191	COG0318	PFAM AMP-dependent synthetase and ligase
ABTJ_03192	COG3028	Belongs to the UPF0307 family
ABTJ_03193	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABTJ_03197	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABTJ_03198	COG0617	tRNA 3'-terminal CCA addition
ABTJ_03199	COG1555	photosystem II stabilization
ABTJ_03200	COG3956	TIGRFAM MazG family protein
ABTJ_03202	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABTJ_03206	COG5002	protein histidine kinase activity
ABTJ_03206	COG2205	protein histidine kinase activity
ABTJ_03206	COG0784	Response regulator, receiver
ABTJ_03207	COG1024	Enoyl-CoA hydratase
ABTJ_03208	COG2084	Dehydrogenase
ABTJ_03209	COG3622	Belongs to the hyi family
ABTJ_03212	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ABTJ_03213	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABTJ_03214	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABTJ_03215	COG0697	spore germination
ABTJ_03217	COG2814	Major facilitator Superfamily
ABTJ_03218	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABTJ_03220	COG0583	DNA-binding transcription factor activity
ABTJ_03221	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABTJ_03224	COG0084	hydrolase, TatD family'
ABTJ_03227	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABTJ_03233	COG0440	acetolactate synthase activity
ABTJ_03234	COG0028	Belongs to the TPP enzyme family
ABTJ_03239	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABTJ_03240	COG0577	efflux transmembrane transporter activity
ABTJ_03240	COG1136	(ABC) transporter
ABTJ_03241	COG1538	Outer membrane efflux protein
ABTJ_03244	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABTJ_03245	COG1162	GTPase activity
ABTJ_03247	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABTJ_03251	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABTJ_03252	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_03260	COG2986	histidine ammonia-lyase
ABTJ_03263	COG0318	PFAM AMP-dependent synthetase and ligase
ABTJ_03265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABTJ_03266	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABTJ_03274	COG1426	Protein conserved in bacteria
ABTJ_03281	COG0793	Belongs to the peptidase S41A family
ABTJ_03284	COG2267	carboxylic ester hydrolase activity
ABTJ_03286	COG1012	belongs to the aldehyde dehydrogenase family
ABTJ_03287	COG3265	gluconokinase activity
ABTJ_03289	COG0800	Aldolase
ABTJ_03291	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABTJ_03292	COG0857	belongs to the CobB CobQ family
ABTJ_03292	COG0280	phosphate acetyltransferase
ABTJ_03293	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABTJ_03293	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABTJ_03297	COG0740	serine-type endopeptidase activity
ABTJ_03299	COG4774	siderophore transport
ABTJ_03301	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABTJ_03303	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABTJ_03303	COG2813	Specifically methylates the guanine in position
ABTJ_03323	COG0788	formyltetrahydrofolate deformylase activity
ABTJ_03326	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABTJ_03327	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABTJ_03328	COG4651	solute:proton antiporter activity
ABTJ_03328	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABTJ_03332	COG0724	RNA recognition motif
ABTJ_03333	COG0210	DNA helicase
ABTJ_03338	COG1733	regulation of RNA biosynthetic process
ABTJ_03342	COG1280	lysine exporter protein (LysE YggA)
ABTJ_03343	COG1560	Kdo2-lipid A biosynthetic process
ABTJ_03345	COG1301	dicarboxylic acid transport
ABTJ_03356	COG0473	3-isopropylmalate dehydrogenase activity
ABTJ_03369	COG0583	DNA-binding transcription factor activity
ABTJ_03371	COG0625	glutathione transferase activity
ABTJ_03372	COG2378	regulation of single-species biofilm formation
ABTJ_03373	COG0546	phosphoglycolate phosphatase activity
ABTJ_03375	COG1530	ribonuclease E activity
ABTJ_03379	COG0583	DNA-binding transcription factor activity
ABTJ_03380	COG4221	oxidoreductase activity
ABTJ_03381	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABTJ_03383	COG0534	Mate efflux family protein
ABTJ_03386	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABTJ_03393	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABTJ_03394	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABTJ_03397	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABTJ_03399	COG0644	oxidoreductase
ABTJ_03399	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABTJ_03400	COG0425	Belongs to the sulfur carrier protein TusA family
ABTJ_03401	COG4535	Mg2 and Co2 transporter CorC
ABTJ_03403	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABTJ_03407	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABTJ_03408	COG0475	glutathione-regulated potassium exporter activity
ABTJ_03408	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABTJ_03409	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABTJ_03411	COG0484	heat shock protein binding
ABTJ_03412	COG0789	Transcriptional regulator
ABTJ_03413	COG0598	Magnesium transport protein CorA
ABTJ_03417	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABTJ_03418	COG1074	ATP-dependent DNA helicase activity
ABTJ_03419	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABTJ_03423	COG2226	methyltransferase
ABTJ_03426	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABTJ_03427	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABTJ_03430	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABTJ_03430	COG2111	Na H antiporter
ABTJ_03431	COG1006	Multisubunit Na H antiporter MnhC subunit
ABTJ_03432	COG0651	ATP synthesis coupled electron transport
ABTJ_03434	COG2212	antiporter activity
ABTJ_03438	COG0195	Participates in both transcription termination and antitermination
ABTJ_03448	COG0237	dephospho-CoA kinase activity
ABTJ_03450	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABTJ_03453	COG0497	DNA recombination
ABTJ_03455	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABTJ_03461	COG2169	Transcriptional regulator
ABTJ_03461	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABTJ_03462	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABTJ_03476	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABTJ_03479	COG0326	Molecular chaperone. Has ATPase activity
ABTJ_03482	COG2056	Na+-H+ antiporter family
ABTJ_03483	COG0596	Alpha beta hydrolase
ABTJ_03502	COG0546	phosphoglycolate phosphatase activity
ABTJ_03503	COG1716	ATPase activity
ABTJ_03512	COG0181	hydroxymethylbilane synthase activity
ABTJ_03514	COG3275	phosphorelay sensor kinase activity
ABTJ_03518	COG1538	Outer membrane efflux protein
ABTJ_03519	COG0697	spore germination
ABTJ_03525	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABTJ_03526	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABTJ_03527	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABTJ_03528	COG0772	Belongs to the SEDS family
ABTJ_03533	COG4974	Belongs to the 'phage' integrase family
ABTJ_03534	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABTJ_03536	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABTJ_03538	COG2197	response regulator
ABTJ_03541	COG0793	Belongs to the peptidase S41A family
ABTJ_03542	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABTJ_03543	COG0795	lipopolysaccharide-transporting ATPase activity
ABTJ_03551	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABTJ_03551	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABTJ_03553	COG0004	ammonium transporteR
ABTJ_03554	COG0347	Belongs to the P(II) protein family
ABTJ_03556	COG0606	chelatase, subunit chli
ABTJ_03566	COG0659	secondary active sulfate transmembrane transporter activity
ABTJ_03567	COG0589	response to stress
ABTJ_03575	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABTJ_03585	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABTJ_03591	COG0659	secondary active sulfate transmembrane transporter activity
ABTJ_03592	COG0589	response to stress
ABTJ_03598	COG0606	chelatase, subunit chli
ABTJ_03599	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABTJ_03601	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABTJ_03605	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABTJ_03608	COG0318	PFAM AMP-dependent synthetase and ligase
ABTJ_03610	COG0477	Major facilitator Superfamily
ABTJ_03611	COG2860	membrane
ABTJ_03613	COG1253	flavin adenine dinucleotide binding
ABTJ_03617	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABTJ_03624	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABTJ_03626	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABTJ_03634	COG1309	transcriptional regulator
ABTJ_03641	COG0758	DNA mediated transformation
ABTJ_03643	COG0697	spore germination
ABTJ_03644	COG1309	transcriptional regulator
ABTJ_03647	COG0386	Belongs to the glutathione peroxidase family
ABTJ_03660	COG1121	(ABC) transporter
ABTJ_03661	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABTJ_03662	COG1280	lysine exporter protein (LysE YggA)
ABTJ_03663	COG2837	iron assimilation
ABTJ_03664	COG0281	malic enzyme
ABTJ_03673	COG0519	Catalyzes the synthesis of GMP from XMP
ABTJ_03673	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABTJ_03674	COG4399	Belongs to the UPF0754 family
ABTJ_03675	COG2259	Doxx family
ABTJ_03676	COG0586	Pfam SNARE associated Golgi protein
ABTJ_03679	COG1192	Involved in chromosome partitioning
ABTJ_03681	COG0271	Belongs to the BolA IbaG family
ABTJ_03690	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ABTJ_03690	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABTJ_03690	COG3321	synthase
ABTJ_03690	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABTJ_03691	COG1960	acyl-CoA dehydrogenase activity
ABTJ_03693	COG2197	response regulator
ABTJ_03695	COG3916	Acyl-homoserine-lactone synthase
ABTJ_03696	COG1846	Transcriptional regulator
ABTJ_03697	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABTJ_03698	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABTJ_03700	COG0318	PFAM AMP-dependent synthetase and ligase
ABTJ_03701	COG0019	diaminopimelate decarboxylase activity
ABTJ_03702	COG0477	Major facilitator Superfamily
ABTJ_03703	COG1024	Enoyl-CoA hydratase
ABTJ_03704	COG1024	Enoyl-CoA hydratase
ABTJ_03705	COG1960	acyl-CoA dehydrogenase activity
ABTJ_03706	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABTJ_03710	COG1113	amino acid transport
ABTJ_03711	COG1113	amino acid transport
ABTJ_03712	COG0251	oxidation-reduction process
ABTJ_03715	COG1522	sequence-specific DNA binding
ABTJ_03720	COG0564	pseudouridine synthase activity
ABTJ_03734	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABTJ_03737	COG1802	Transcriptional regulator
ABTJ_03738	COG1448	Aminotransferase
ABTJ_03739	COG0277	FAD linked oxidase domain protein
ABTJ_03741	COG2186	Transcriptional regulator
ABTJ_03743	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABTJ_03744	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABTJ_03747	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABTJ_03748	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABTJ_03749	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABTJ_03761	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABTJ_03762	COG1596	polysaccharide export
ABTJ_03767	COG0728	peptidoglycan biosynthetic process
ABTJ_03768	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABTJ_03779	COG0546	phosphoglycolate phosphatase activity
ABTJ_03780	COG1028	Short-chain dehydrogenase reductase Sdr
ABTJ_03784	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABTJ_03785	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABTJ_03786	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABTJ_03787	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABTJ_03788	COG1116	anion transmembrane transporter activity
ABTJ_03789	COG1309	transcriptional regulator
ABTJ_03790	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABTJ_03792	COG0196	riboflavin kinase activity
ABTJ_03793	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABTJ_03795	COG1047	Peptidyl-prolyl cis-trans
ABTJ_03804	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABTJ_03809	COG0583	DNA-binding transcription factor activity
ABTJ_03815	COG2951	lytic endotransglycosylase activity
ABTJ_03817	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABTJ_03820	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABTJ_03822	COG0671	phosphoesterase, PA-phosphatase related
ABTJ_03823	COG0861	Integral membrane protein TerC family
ABTJ_03825	COG0754	glutathionylspermidine amidase activity
ABTJ_03827	COG0402	S-adenosylhomocysteine deaminase activity
ABTJ_03831	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABTJ_03832	COG1230	cation diffusion facilitator family transporter
ABTJ_03835	COG0706	membrane insertase activity
ABTJ_03838	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABTJ_p0014	COG1525	nuclease
ABTJ_p0044	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABTJ_p0074	COG0484	heat shock protein binding
ABTJ_p0088	COG1061	Type III restriction enzyme res subunit
ABTJ_p0090	COG1192	Involved in chromosome partitioning
ABTJ_p0091	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABTJ_p0093	COG1061	Type III restriction enzyme res subunit
ABTJ_p0109	COG1192	Involved in chromosome partitioning
ABTJ_p2005	COG0358	DNA primase activity
ABTJ_p2011	COG0194	GDP metabolic process
ABTJ_p2016	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABTJ_p2026	COG0587	DNA-directed DNA polymerase activity
ABTJ_p2029	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABTJ_p2029	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABTJ_p2040	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABTJ_p2040	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABTJ_p2041	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABTJ_p2050	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABTJ_p2060	COG2130	NADP-dependent
ABTJ_p2061	COG1309	transcriptional regulator
ABTJ_p2063	COG1902	pentaerythritol trinitrate reductase activity
ABTJ_p2065	COG1979	alcohol dehydrogenase
ABTJ_p2067	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ABTJ_p2073	COG1063	alcohol dehydrogenase
ABTJ_p2088	COG1388	LysM domain
ABTJ_p2091	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABTJ_p2095	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system