locus-tag	class	description
ABZJ_00002	COG0187	DNA topoisomerase II activity
ABZJ_00004	COG0592	DNA-directed DNA polymerase activity
ABZJ_00006	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABZJ_00009	COG0706	membrane insertase activity
ABZJ_00011	COG1230	cation diffusion facilitator family transporter
ABZJ_00013	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABZJ_00016	COG0402	S-adenosylhomocysteine deaminase activity
ABZJ_00018	COG0754	glutathionylspermidine amidase activity
ABZJ_00020	COG0861	Integral membrane protein TerC family
ABZJ_00021	COG0671	phosphoesterase, PA-phosphatase related
ABZJ_00023	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABZJ_00027	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABZJ_00028	COG2951	lytic endotransglycosylase activity
ABZJ_00039	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABZJ_00042	COG1047	Peptidyl-prolyl cis-trans
ABZJ_00044	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABZJ_00045	COG0196	riboflavin kinase activity
ABZJ_00047	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABZJ_00048	COG1309	transcriptional regulator
ABZJ_00049	COG1116	anion transmembrane transporter activity
ABZJ_00050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABZJ_00051	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABZJ_00052	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABZJ_00053	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABZJ_00057	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_00058	COG0546	phosphoglycolate phosphatase activity
ABZJ_00070	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABZJ_00071	COG0728	peptidoglycan biosynthetic process
ABZJ_00076	COG1596	polysaccharide export
ABZJ_00077	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABZJ_00079	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABZJ_00080	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ABZJ_00081	COG2089	acid synthase
ABZJ_00082	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABZJ_00083	COG1083	cytidylyl-transferase
ABZJ_00084	COG2244	polysaccharide biosynthetic process
ABZJ_00092	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABZJ_00093	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABZJ_00096	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABZJ_00097	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABZJ_00100	COG2186	Transcriptional regulator
ABZJ_00102	COG0277	FAD linked oxidase domain protein
ABZJ_00103	COG1448	Aminotransferase
ABZJ_00104	COG1802	Transcriptional regulator
ABZJ_00107	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABZJ_00118	COG0564	pseudouridine synthase activity
ABZJ_00123	COG1522	sequence-specific DNA binding
ABZJ_00126	COG0251	oxidation-reduction process
ABZJ_00127	COG1113	amino acid transport
ABZJ_00133	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABZJ_00134	COG1960	acyl-CoA dehydrogenase activity
ABZJ_00135	COG1024	Enoyl-CoA hydratase
ABZJ_00136	COG1024	Enoyl-CoA hydratase
ABZJ_00137	COG0477	Major facilitator Superfamily
ABZJ_00138	COG3916	Acyl-homoserine-lactone synthase
ABZJ_00140	COG2197	response regulator
ABZJ_00142	COG1960	acyl-CoA dehydrogenase activity
ABZJ_00143	COG3321	synthase
ABZJ_00143	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ABZJ_00143	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABZJ_00143	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABZJ_00144	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABZJ_00147	COG2267	carboxylic ester hydrolase activity
ABZJ_00149	COG0271	Belongs to the BolA IbaG family
ABZJ_00151	COG1192	Involved in chromosome partitioning
ABZJ_00154	COG0586	Pfam SNARE associated Golgi protein
ABZJ_00155	COG2259	Doxx family
ABZJ_00156	COG4399	Belongs to the UPF0754 family
ABZJ_00157	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABZJ_00157	COG0519	Catalyzes the synthesis of GMP from XMP
ABZJ_00166	COG0281	malic enzyme
ABZJ_00168	COG2837	iron assimilation
ABZJ_00169	COG1280	lysine exporter protein (LysE YggA)
ABZJ_00170	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABZJ_00171	COG1121	(ABC) transporter
ABZJ_00185	COG0386	Belongs to the glutathione peroxidase family
ABZJ_00188	COG1309	transcriptional regulator
ABZJ_00189	COG0697	spore germination
ABZJ_00191	COG0758	DNA mediated transformation
ABZJ_00198	COG1309	transcriptional regulator
ABZJ_00200	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABZJ_00202	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABZJ_00209	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABZJ_00214	COG1253	flavin adenine dinucleotide binding
ABZJ_00216	COG2860	membrane
ABZJ_00217	COG0477	Major facilitator Superfamily
ABZJ_00219	COG0318	PFAM AMP-dependent synthetase and ligase
ABZJ_00222	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABZJ_00226	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABZJ_00228	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABZJ_00229	COG0606	chelatase, subunit chli
ABZJ_00238	COG0589	response to stress
ABZJ_00239	COG0659	secondary active sulfate transmembrane transporter activity
ABZJ_00245	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABZJ_00257	COG0589	response to stress
ABZJ_00258	COG0659	secondary active sulfate transmembrane transporter activity
ABZJ_00268	COG0606	chelatase, subunit chli
ABZJ_00270	COG0347	Belongs to the P(II) protein family
ABZJ_00271	COG0004	ammonium transporteR
ABZJ_00273	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABZJ_00273	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABZJ_00281	COG0795	lipopolysaccharide-transporting ATPase activity
ABZJ_00282	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABZJ_00283	COG0793	Belongs to the peptidase S41A family
ABZJ_00286	COG2197	response regulator
ABZJ_00288	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABZJ_00290	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABZJ_00291	COG4974	Belongs to the 'phage' integrase family
ABZJ_00296	COG0772	Belongs to the SEDS family
ABZJ_00297	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABZJ_00298	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABZJ_00299	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABZJ_00304	COG0697	spore germination
ABZJ_00305	COG1538	Outer membrane efflux protein
ABZJ_00308	COG3275	phosphorelay sensor kinase activity
ABZJ_00311	COG0181	hydroxymethylbilane synthase activity
ABZJ_00320	COG1716	ATPase activity
ABZJ_00321	COG0546	phosphoglycolate phosphatase activity
ABZJ_00335	COG0596	Alpha beta hydrolase
ABZJ_00336	COG2056	Na+-H+ antiporter family
ABZJ_00339	COG0326	Molecular chaperone. Has ATPase activity
ABZJ_00342	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABZJ_00356	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABZJ_00357	COG2169	Transcriptional regulator
ABZJ_00357	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABZJ_00363	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABZJ_00365	COG0497	DNA recombination
ABZJ_00368	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABZJ_00370	COG0237	dephospho-CoA kinase activity
ABZJ_00377	COG0195	Participates in both transcription termination and antitermination
ABZJ_00381	COG2212	antiporter activity
ABZJ_00382	COG0651	ATP synthesis coupled electron transport
ABZJ_00383	COG1006	Multisubunit Na H antiporter MnhC subunit
ABZJ_00384	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABZJ_00384	COG2111	Na H antiporter
ABZJ_00387	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABZJ_00388	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABZJ_00391	COG2226	methyltransferase
ABZJ_00395	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABZJ_00396	COG1074	ATP-dependent DNA helicase activity
ABZJ_00397	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABZJ_00402	COG0598	Magnesium transport protein CorA
ABZJ_00403	COG0789	Transcriptional regulator
ABZJ_00404	COG0484	heat shock protein binding
ABZJ_00406	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABZJ_00407	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABZJ_00407	COG0475	glutathione-regulated potassium exporter activity
ABZJ_00408	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABZJ_00412	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABZJ_00414	COG4535	Mg2 and Co2 transporter CorC
ABZJ_00415	COG0425	Belongs to the sulfur carrier protein TusA family
ABZJ_00416	COG0644	oxidoreductase
ABZJ_00416	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABZJ_00418	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABZJ_00421	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABZJ_00422	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABZJ_00429	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABZJ_00432	COG0534	Mate efflux family protein
ABZJ_00434	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABZJ_00435	COG4221	oxidoreductase activity
ABZJ_00436	COG0583	DNA-binding transcription factor activity
ABZJ_00438	COG1530	ribonuclease E activity
ABZJ_00442	COG0546	phosphoglycolate phosphatase activity
ABZJ_00443	COG2378	regulation of single-species biofilm formation
ABZJ_00444	COG0625	glutathione transferase activity
ABZJ_00446	COG0583	DNA-binding transcription factor activity
ABZJ_00459	COG0473	3-isopropylmalate dehydrogenase activity
ABZJ_00470	COG1301	dicarboxylic acid transport
ABZJ_00472	COG1560	Kdo2-lipid A biosynthetic process
ABZJ_00473	COG1280	lysine exporter protein (LysE YggA)
ABZJ_00477	COG1733	regulation of RNA biosynthetic process
ABZJ_00482	COG0210	DNA helicase
ABZJ_00483	COG0724	RNA recognition motif
ABZJ_00487	COG4651	solute:proton antiporter activity
ABZJ_00487	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABZJ_00488	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABZJ_00489	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABZJ_00492	COG0788	formyltetrahydrofolate deformylase activity
ABZJ_00512	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABZJ_00512	COG2813	Specifically methylates the guanine in position
ABZJ_00514	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABZJ_00516	COG4774	siderophore transport
ABZJ_00518	COG0740	serine-type endopeptidase activity
ABZJ_00522	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABZJ_00522	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABZJ_00523	COG0857	belongs to the CobB CobQ family
ABZJ_00523	COG0280	phosphate acetyltransferase
ABZJ_00524	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABZJ_00527	COG0800	Aldolase
ABZJ_00529	COG3265	gluconokinase activity
ABZJ_00530	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_00532	COG2267	carboxylic ester hydrolase activity
ABZJ_00535	COG0793	Belongs to the peptidase S41A family
ABZJ_00542	COG1426	Protein conserved in bacteria
ABZJ_00550	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABZJ_00551	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABZJ_00553	COG0318	PFAM AMP-dependent synthetase and ligase
ABZJ_00556	COG2986	histidine ammonia-lyase
ABZJ_00564	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_00565	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABZJ_00569	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABZJ_00571	COG1162	GTPase activity
ABZJ_00572	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABZJ_00575	COG1538	Outer membrane efflux protein
ABZJ_00576	COG0577	efflux transmembrane transporter activity
ABZJ_00576	COG1136	(ABC) transporter
ABZJ_00577	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABZJ_00582	COG0028	Belongs to the TPP enzyme family
ABZJ_00583	COG0440	acetolactate synthase activity
ABZJ_00591	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABZJ_00594	COG0084	hydrolase, TatD family'
ABZJ_00597	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABZJ_00599	COG0583	DNA-binding transcription factor activity
ABZJ_00601	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABZJ_00602	COG2814	Major facilitator Superfamily
ABZJ_00604	COG0697	spore germination
ABZJ_00605	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABZJ_00606	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABZJ_00607	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ABZJ_00610	COG3622	Belongs to the hyi family
ABZJ_00611	COG2084	Dehydrogenase
ABZJ_00612	COG1024	Enoyl-CoA hydratase
ABZJ_00613	COG0784	Response regulator, receiver
ABZJ_00613	COG2205	protein histidine kinase activity
ABZJ_00613	COG5002	protein histidine kinase activity
ABZJ_00617	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABZJ_00619	COG3956	TIGRFAM MazG family protein
ABZJ_00620	COG1555	photosystem II stabilization
ABZJ_00621	COG0617	tRNA 3'-terminal CCA addition
ABZJ_00622	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABZJ_00626	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABZJ_00627	COG3028	Belongs to the UPF0307 family
ABZJ_00628	COG0318	PFAM AMP-dependent synthetase and ligase
ABZJ_00630	COG0625	glutathione transferase activity
ABZJ_00631	COG1238	metal cluster binding
ABZJ_00635	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABZJ_00640	COG0072	phenylalanine-tRNA ligase activity
ABZJ_00645	COG0248	Ppx GppA phosphatase
ABZJ_00654	COG1764	response to oxidative stress
ABZJ_00655	COG1846	Transcriptional regulator
ABZJ_00657	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABZJ_00664	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABZJ_00665	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABZJ_00666	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABZJ_00668	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABZJ_00678	COG1214	PFAM Peptidase M22, glycoprotease
ABZJ_00683	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABZJ_00684	COG0561	phosphatase activity
ABZJ_00686	COG2132	Multicopper oxidase
ABZJ_00687	COG3667	copper resistance
ABZJ_00690	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABZJ_00691	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABZJ_00692	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABZJ_00694	COG1063	alcohol dehydrogenase
ABZJ_00695	COG1960	acyl-CoA dehydrogenase activity
ABZJ_00696	COG2814	Major facilitator Superfamily
ABZJ_00697	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABZJ_00699	COG1053	succinate dehydrogenase
ABZJ_00700	COG0583	DNA-binding transcription factor activity
ABZJ_00703	COG0583	DNA-binding transcription factor activity
ABZJ_00705	COG1473	amidohydrolase
ABZJ_00710	COG0583	DNA-binding transcription factor activity
ABZJ_00712	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABZJ_00713	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABZJ_00719	COG0384	phenazine biosynthesis protein PhzF
ABZJ_00725	COG4993	Dehydrogenase
ABZJ_00740	COG2205	protein histidine kinase activity
ABZJ_00742	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABZJ_00746	COG0745	RESPONSE REGULATOR receiver
ABZJ_00747	COG2205	protein histidine kinase activity
ABZJ_00754	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABZJ_00760	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABZJ_00761	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABZJ_00766	COG0583	DNA-binding transcription factor activity
ABZJ_00770	COG0668	transmembrane transport
ABZJ_00772	COG2081	HI0933 family
ABZJ_00773	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABZJ_00779	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABZJ_00779	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABZJ_00781	COG0489	protein tyrosine kinase activity
ABZJ_00791	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABZJ_00793	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABZJ_00796	COG0730	response to heat
ABZJ_00798	COG1196	nuclear chromosome segregation
ABZJ_00802	COG2223	nitrite transmembrane transporter activity
ABZJ_00803	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABZJ_00804	COG1877	trehalose-phosphatase activity
ABZJ_00805	COG2226	methyltransferase
ABZJ_00805	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABZJ_00805	COG0596	Alpha beta hydrolase
ABZJ_00808	COG4106	trans-aconitate 2-methyltransferase activity
ABZJ_00811	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABZJ_00812	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABZJ_00813	COG0009	L-threonylcarbamoyladenylate synthase
ABZJ_00814	COG3101	peptidyl-lysine hydroxylation
ABZJ_00815	COG1399	metal-binding, possibly nucleic acid-binding protein
ABZJ_00820	COG1652	LysM domain
ABZJ_00821	COG0351	phosphomethylpyrimidine kinase
ABZJ_00821	COG0352	thiamine-phosphate diphosphorylase activity
ABZJ_00821	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABZJ_00823	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABZJ_00829	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABZJ_00830	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABZJ_00833	COG0358	DNA primase activity
ABZJ_00835	COG0564	pseudouridine synthase activity
ABZJ_00840	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABZJ_00842	COG0583	DNA-binding transcription factor activity
ABZJ_00843	COG0473	3-isopropylmalate dehydrogenase activity
ABZJ_00847	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_00850	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABZJ_00850	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABZJ_00862	COG0456	acetyltransferase
ABZJ_00864	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABZJ_00865	COG0492	ferredoxin-NADP+ reductase activity
ABZJ_00866	COG1674	ftsk spoiiie
ABZJ_00866	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABZJ_00867	COG1280	lysine exporter protein (LysE YggA)
ABZJ_00871	COG2894	cell division
ABZJ_00874	COG0204	Acyl-transferase
ABZJ_00875	COG2885	chlorophyll binding
ABZJ_00876	COG0210	DNA helicase
ABZJ_00878	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABZJ_00881	COG0121	glutamine amidotransferase
ABZJ_00885	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABZJ_00886	COG0735	belongs to the Fur family
ABZJ_00892	COG0420	3'-5' exonuclease activity
ABZJ_00896	COG1090	epimerase
ABZJ_00899	COG2050	protein possibly involved in aromatic compounds catabolism
ABZJ_00901	COG2814	Major facilitator Superfamily
ABZJ_00902	COG0405	Gamma-glutamyltransferase
ABZJ_00917	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABZJ_00935	COG1484	DNA-dependent DNA replication
ABZJ_00945	COG3755	Protein conserved in bacteria
ABZJ_00975	COG2026	Addiction module toxin, RelE StbE family
ABZJ_00983	COG0592	DNA-directed DNA polymerase activity
ABZJ_01009	COG0477	Major facilitator Superfamily
ABZJ_01010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABZJ_01012	COG1595	DNA-templated transcription, initiation
ABZJ_01024	COG0531	amino acid
ABZJ_01025	COG2040	homocysteine
ABZJ_01030	COG1309	transcriptional regulator
ABZJ_01031	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABZJ_01032	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABZJ_01034	COG1607	acyl-coa hydrolase
ABZJ_01036	COG0523	cobalamin synthesis protein
ABZJ_01038	COG4681	YaeQ
ABZJ_01040	COG1649	PFAM Uncharacterised BCR, COG1649
ABZJ_01040	COG0726	polysaccharide deacetylase
ABZJ_01041	COG1215	transferase activity, transferring glycosyl groups
ABZJ_01043	COG1024	Enoyl-CoA hydratase
ABZJ_01046	COG1414	Transcriptional regulator
ABZJ_01050	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01052	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABZJ_01053	COG2271	Major facilitator Superfamily
ABZJ_01055	COG2267	carboxylic ester hydrolase activity
ABZJ_01056	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01059	COG0028	Belongs to the TPP enzyme family
ABZJ_01061	COG0477	Major facilitator Superfamily
ABZJ_01063	COG0242	peptide deformylase activity
ABZJ_01064	COG2066	Belongs to the glutaminase family
ABZJ_01065	COG2207	Transcriptional regulator
ABZJ_01066	COG2223	nitrite transmembrane transporter activity
ABZJ_01069	COG0583	DNA-binding transcription factor activity
ABZJ_01070	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01071	COG2271	Major facilitator Superfamily
ABZJ_01072	COG3959	Transketolase, thiamine diphosphate binding domain
ABZJ_01073	COG3958	Transketolase
ABZJ_01076	COG0306	phosphate transporter
ABZJ_01080	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABZJ_01090	COG4181	ATPase activity
ABZJ_01091	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABZJ_01096	COG0583	DNA-binding transcription factor activity
ABZJ_01098	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABZJ_01099	COG1773	rubredoxin
ABZJ_01109	COG2851	Citrate transporter
ABZJ_01110	COG1253	flavin adenine dinucleotide binding
ABZJ_01119	COG0804	urea catabolic process
ABZJ_01121	COG0830	nickel cation binding
ABZJ_01124	COG0742	ribosomal rna small subunit methyltransferase
ABZJ_01125	COG0768	penicillin binding
ABZJ_01130	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABZJ_01131	COG2878	Part of a membrane complex involved in electron transport
ABZJ_01132	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABZJ_01134	COG3384	dioxygenase
ABZJ_01139	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABZJ_01208	COG0739	heme binding
ABZJ_01217	COG2194	sulfuric ester hydrolase activity
ABZJ_01226	COG0006	proline dipeptidase activity
ABZJ_01227	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABZJ_01228	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABZJ_01234	COG1279	arginine transmembrane transporter activity
ABZJ_01235	COG0583	DNA-binding transcription factor activity
ABZJ_01243	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABZJ_01244	COG1388	LysM domain
ABZJ_01244	COG0741	lytic transglycosylase activity
ABZJ_01244	COG0741	lytic transglycosylase activity
ABZJ_01244	COG1388	LysM domain
ABZJ_01246	COG4174	ABC transporter (Permease)
ABZJ_01247	COG4239	(ABC) transporter, permease
ABZJ_01248	COG4172	Belongs to the ABC transporter superfamily
ABZJ_01251	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABZJ_01253	COG3706	GGDEF domain
ABZJ_01253	COG2203	Gaf domain
ABZJ_01253	COG4251	negative regulation of phosphorylation
ABZJ_01253	COG5001	Diguanylate cyclase
ABZJ_01256	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABZJ_01256	COG1902	pentaerythritol trinitrate reductase activity
ABZJ_01259	COG4269	membrane
ABZJ_01265	COG3501	Rhs element vgr protein
ABZJ_01266	COG3209	COG3209 Rhs family protein
ABZJ_01276	COG1113	amino acid transport
ABZJ_01278	COG3316	Transposase and inactivated derivatives
ABZJ_01279	COG0531	amino acid
ABZJ_01295	COG3316	Transposase and inactivated derivatives
ABZJ_01297	COG0300	oxidoreductase activity
ABZJ_01299	COG1309	transcriptional regulator
ABZJ_01300	COG1741	Belongs to the pirin family
ABZJ_01303	COG2072	flavoprotein involved in K transport
ABZJ_01305	COG2252	PERMEase
ABZJ_01306	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABZJ_01307	COG3038	cytochrome b561
ABZJ_01309	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABZJ_01313	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABZJ_01316	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABZJ_01319	COG0667	Aldo Keto reductase
ABZJ_01321	COG1765	OsmC-like protein
ABZJ_01331	COG2885	chlorophyll binding
ABZJ_01333	COG0625	glutathione transferase activity
ABZJ_01334	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABZJ_01338	COG3634	alkyl hydroperoxide reductase activity
ABZJ_01340	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABZJ_01342	COG0450	alkyl hydroperoxide reductase
ABZJ_01343	COG1643	Atp-dependent helicase
ABZJ_01346	COG2814	Major facilitator Superfamily
ABZJ_01347	COG3135	benzoate transporter
ABZJ_01348	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01349	COG0543	2 iron, 2 sulfur cluster binding
ABZJ_01349	COG0633	Ferredoxin
ABZJ_01350	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABZJ_01351	COG4638	Rieske (2fe-2S)
ABZJ_01352	COG0583	DNA-binding transcription factor activity
ABZJ_01363	COG1570	exodeoxyribonuclease VII activity
ABZJ_01369	COG1280	lysine exporter protein (LysE YggA)
ABZJ_01370	COG1278	Cold shock
ABZJ_01377	COG2814	Major facilitator Superfamily
ABZJ_01378	COG1733	regulation of RNA biosynthetic process
ABZJ_01386	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABZJ_01388	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABZJ_01389	COG1137	ATPase activity
ABZJ_01390	COG1538	Outer membrane efflux protein
ABZJ_01398	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABZJ_01402	COG1522	sequence-specific DNA binding
ABZJ_01403	COG5006	permease, DMT superfamily
ABZJ_01405	COG1560	Kdo2-lipid A biosynthetic process
ABZJ_01408	COG2814	Major facilitator Superfamily
ABZJ_01412	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABZJ_01418	COG3501	Rhs element vgr protein
ABZJ_01419	COG3209	COG3209 Rhs family protein
ABZJ_01422	COG0583	DNA-binding transcription factor activity
ABZJ_01424	COG1914	H( )-stimulated, divalent metal cation uptake system
ABZJ_01429	COG4770	biotin carboxylase activity
ABZJ_01430	COG0038	chloride channel
ABZJ_01435	COG1309	transcriptional regulator
ABZJ_01437	COG1063	alcohol dehydrogenase
ABZJ_01440	COG0439	Biotin carboxylase
ABZJ_01441	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABZJ_01446	COG0864	Transcriptional regulator
ABZJ_01448	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABZJ_01449	COG1116	anion transmembrane transporter activity
ABZJ_01463	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABZJ_01463	COG2885	chlorophyll binding
ABZJ_01471	COG0583	DNA-binding transcription factor activity
ABZJ_01473	COG0590	tRNA wobble adenosine to inosine editing
ABZJ_01474	COG2807	transmembrane transport
ABZJ_01477	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABZJ_01482	COG0789	Transcriptional regulator
ABZJ_01485	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABZJ_01489	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABZJ_01491	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABZJ_01494	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_01495	COG0531	amino acid
ABZJ_01496	COG1760	l-serine dehydratase
ABZJ_01497	COG2030	dehydratase
ABZJ_01497	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_01498	COG3396	Phenylacetate-CoA oxygenase
ABZJ_01499	COG3460	Phenylacetate-CoA oxygenase
ABZJ_01500	COG3396	Phenylacetate-CoA oxygenase
ABZJ_01501	COG2151	metal-sulfur cluster biosynthetic enzyme
ABZJ_01502	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABZJ_01503	COG1024	Enoyl-CoA hydratase
ABZJ_01504	COG1024	Enoyl-CoA hydratase
ABZJ_01505	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABZJ_01506	COG0183	Belongs to the thiolase family
ABZJ_01507	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABZJ_01508	COG3327	negative regulation of DNA-templated transcription, initiation
ABZJ_01510	COG2050	protein possibly involved in aromatic compounds catabolism
ABZJ_01518	COG0753	catalase activity
ABZJ_01519	COG3038	cytochrome b561
ABZJ_01523	COG2267	carboxylic ester hydrolase activity
ABZJ_01524	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABZJ_01525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABZJ_01526	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_01528	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABZJ_01530	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_01531	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABZJ_01532	COG0583	DNA-binding transcription factor activity
ABZJ_01534	COG1414	Transcriptional regulator
ABZJ_01535	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABZJ_01537	COG1840	ABC-type Fe3 transport system, periplasmic component
ABZJ_01538	COG3842	ATPase activity
ABZJ_01541	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABZJ_01542	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABZJ_01543	COG2814	Major facilitator Superfamily
ABZJ_01544	COG1960	acyl-CoA dehydrogenase activity
ABZJ_01548	COG1024	Enoyl-CoA hydratase
ABZJ_01550	COG2814	Major facilitator Superfamily
ABZJ_01552	COG0183	Belongs to the thiolase family
ABZJ_01553	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABZJ_01554	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01555	COG1024	Enoyl-CoA hydratase
ABZJ_01556	COG1960	acyl-CoA dehydrogenase activity
ABZJ_01557	COG2814	Major facilitator Superfamily
ABZJ_01558	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABZJ_01559	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABZJ_01561	COG2814	Major facilitator Superfamily
ABZJ_01563	COG1960	acyl-CoA dehydrogenase activity
ABZJ_01566	COG0583	DNA-binding transcription factor activity
ABZJ_01569	COG1024	Enoyl-CoA hydratase
ABZJ_01570	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABZJ_01571	COG1960	acyl-CoA dehydrogenase activity
ABZJ_01572	COG1309	transcriptional regulator
ABZJ_01573	COG0318	PFAM AMP-dependent synthetase and ligase
ABZJ_01577	COG0583	DNA-binding transcription factor activity
ABZJ_01587	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01591	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABZJ_01595	COG2205	protein histidine kinase activity
ABZJ_01595	COG0784	Response regulator, receiver
ABZJ_01598	COG0765	amino acid transport
ABZJ_01599	COG0765	amino acid transport
ABZJ_01600	COG1126	abc transporter atp-binding protein
ABZJ_01601	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABZJ_01602	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABZJ_01605	COG1280	lysine exporter protein (LysE YggA)
ABZJ_01606	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABZJ_01607	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABZJ_01608	COG1045	serine acetyltransferase
ABZJ_01611	COG0583	DNA-binding transcription factor activity
ABZJ_01612	COG0625	glutathione transferase activity
ABZJ_01613	COG0625	glutathione transferase activity
ABZJ_01614	COG0583	DNA-binding transcription factor activity
ABZJ_01616	COG1346	cytolysis
ABZJ_01620	COG2814	Major facilitator Superfamily
ABZJ_01623	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABZJ_01624	COG3052	prosthetic group binding
ABZJ_01628	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABZJ_01632	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABZJ_01634	COG1294	oxidase, subunit
ABZJ_01635	COG1271	oxidase subunit
ABZJ_01640	COG0477	Major facilitator Superfamily
ABZJ_01642	COG4521	taurine ABC transporter
ABZJ_01643	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABZJ_01644	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABZJ_01645	COG2175	clavaminate synthase activity
ABZJ_01647	COG1953	Uracil, thiamine, allantoin
ABZJ_01649	COG0583	DNA-binding transcription factor activity
ABZJ_01651	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABZJ_01654	COG0640	Transcriptional regulator
ABZJ_01655	COG0798	PFAM Bile acid sodium symporter
ABZJ_01656	COG0583	DNA-binding transcription factor activity
ABZJ_01659	COG3634	alkyl hydroperoxide reductase activity
ABZJ_01667	COG0436	Aminotransferase
ABZJ_01669	COG0386	Belongs to the glutathione peroxidase family
ABZJ_01677	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABZJ_01682	COG0012	GTP binding
ABZJ_01683	COG2011	ABC-type metal ion transport system permease component
ABZJ_01684	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABZJ_01686	COG1464	Belongs to the NlpA lipoprotein family
ABZJ_01692	COG0765	amino acid transport
ABZJ_01693	COG0765	amino acid transport
ABZJ_01694	COG1126	abc transporter atp-binding protein
ABZJ_01696	COG1522	sequence-specific DNA binding
ABZJ_01699	COG1309	transcriptional regulator
ABZJ_01703	COG0583	DNA-binding transcription factor activity
ABZJ_01705	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABZJ_01707	COG0697	spore germination
ABZJ_01712	COG3121	Chaperone
ABZJ_01713	COG3539	Fimbrial protein
ABZJ_01717	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABZJ_01717	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABZJ_01728	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABZJ_01730	COG2353	YceI-like domain
ABZJ_01732	COG3698	Phosphodiester glycosidase
ABZJ_01735	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABZJ_01736	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABZJ_01736	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABZJ_01736	COG0506	proline dehydrogenase activity
ABZJ_01738	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABZJ_01739	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABZJ_01743	COG1132	(ABC) transporter
ABZJ_01744	COG3122	Protein conserved in bacteria
ABZJ_01745	COG3619	membrane
ABZJ_01747	COG0640	Transcriptional regulator
ABZJ_01749	COG2850	peptidyl-arginine hydroxylation
ABZJ_01750	COG0424	maF-like protein
ABZJ_01754	COG0191	fructose-bisphosphate aldolase activity
ABZJ_01755	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABZJ_01758	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABZJ_01760	COG1192	Involved in chromosome partitioning
ABZJ_01761	COG1475	DNA binding
ABZJ_01762	COG0811	peptide transport
ABZJ_01764	COG1132	(ABC) transporter
ABZJ_01765	COG1663	tetraacyldisaccharide 4'-kinase activity
ABZJ_01769	COG0084	hydrolase, TatD family'
ABZJ_01772	COG2165	general secretion pathway protein
ABZJ_01778	COG0590	tRNA wobble adenosine to inosine editing
ABZJ_01782	COG0776	regulation of translation
ABZJ_01788	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABZJ_01789	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABZJ_01799	COG0339	signal peptide processing
ABZJ_01801	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABZJ_01808	COG0702	epimerase
ABZJ_01809	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABZJ_01813	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABZJ_01818	COG0316	Belongs to the HesB IscA family
ABZJ_01819	COG0822	iron-sulfur transferase activity
ABZJ_01824	COG0776	regulation of translation
ABZJ_01825	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABZJ_01826	COG2207	Transcriptional regulator
ABZJ_01827	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABZJ_01828	COG1960	acyl-CoA dehydrogenase activity
ABZJ_01829	COG1960	acyl-CoA dehydrogenase activity
ABZJ_01832	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABZJ_01836	COG4264	IucA IucC family
ABZJ_01837	COG4264	IucA IucC family
ABZJ_01849	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABZJ_01853	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABZJ_01854	COG0730	response to heat
ABZJ_01858	COG4773	Receptor
ABZJ_01859	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABZJ_01862	COG1131	(ABC) transporter
ABZJ_01863	COG0842	Transport permease protein
ABZJ_01864	COG0842	Transport permease protein
ABZJ_01876	COG2226	methyltransferase
ABZJ_01879	COG2963	transposase activity
ABZJ_01881	COG4372	Transposase
ABZJ_01884	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABZJ_01891	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABZJ_01893	COG0133	tryptophan synthase activity
ABZJ_01896	COG3706	GGDEF domain
ABZJ_01899	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABZJ_01900	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABZJ_01901	COG0022	dehydrogenase e1 component
ABZJ_01902	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABZJ_01903	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABZJ_01905	COG1063	alcohol dehydrogenase
ABZJ_01906	COG3781	membrane
ABZJ_01908	COG3453	Protein conserved in bacteria
ABZJ_01908	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABZJ_01910	COG0730	response to heat
ABZJ_01913	COG2207	Transcriptional regulator
ABZJ_01913	COG3708	Transcriptional regulator
ABZJ_01916	COG1733	regulation of RNA biosynthetic process
ABZJ_01917	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABZJ_01922	COG4521	taurine ABC transporter
ABZJ_01923	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABZJ_01927	COG0477	Major facilitator Superfamily
ABZJ_01929	COG1027	Aspartate ammonia-lyase
ABZJ_01932	COG0583	DNA-binding transcription factor activity
ABZJ_01933	COG0583	DNA-binding transcription factor activity
ABZJ_01934	COG0183	Belongs to the thiolase family
ABZJ_01935	COG2031	fatty acid transporter
ABZJ_01936	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABZJ_01938	COG0583	DNA-binding transcription factor activity
ABZJ_01940	COG2610	gluconate transmembrane transporter activity
ABZJ_01941	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01944	COG2207	Transcriptional regulator
ABZJ_01946	COG0412	Dienelactone hydrolase
ABZJ_01947	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01949	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABZJ_01952	COG0543	2 iron, 2 sulfur cluster binding
ABZJ_01952	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABZJ_01953	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABZJ_01954	COG4638	Rieske (2fe-2S)
ABZJ_01956	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABZJ_01957	COG4149	molybdate abc transporter
ABZJ_01958	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABZJ_01959	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_01960	COG3433	isochorismatase activity
ABZJ_01960	COG1535	isochorismatase
ABZJ_01973	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABZJ_01976	COG0753	catalase activity
ABZJ_01978	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABZJ_01985	COG1061	Type III restriction enzyme res subunit
ABZJ_01986	COG1192	Involved in chromosome partitioning
ABZJ_01988	COG1061	Type III restriction enzyme res subunit
ABZJ_01993	COG3539	Fimbrial protein
ABZJ_01997	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABZJ_02001	COG2072	flavoprotein involved in K transport
ABZJ_02003	COG1538	Outer membrane efflux protein
ABZJ_02004	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABZJ_02005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABZJ_02006	COG0745	RESPONSE REGULATOR receiver
ABZJ_02007	COG2205	protein histidine kinase activity
ABZJ_02009	COG2207	Transcriptional regulator
ABZJ_02012	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_02023	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABZJ_02050	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABZJ_02054	COG1120	ATPase activity
ABZJ_02058	COG1064	alcohol dehydrogenase
ABZJ_02061	COG2207	Transcriptional regulator
ABZJ_02062	COG2084	Dehydrogenase
ABZJ_02064	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABZJ_02065	COG0583	DNA-binding transcription factor activity
ABZJ_02067	COG0129	dihydroxy-acid dehydratase activity
ABZJ_02068	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_02071	COG1566	PFAM secretion protein HlyD family protein
ABZJ_02075	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABZJ_02076	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABZJ_02081	COG0583	DNA-binding transcription factor activity
ABZJ_02091	COG3210	domain, Protein
ABZJ_02092	COG2831	hemolysin activation secretion protein
ABZJ_02095	COG1473	amidohydrolase
ABZJ_02097	COG0475	glutathione-regulated potassium exporter activity
ABZJ_02097	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABZJ_02099	COG0583	DNA-binding transcription factor activity
ABZJ_02100	COG1335	isochorismatase
ABZJ_02102	COG1309	transcriptional regulator
ABZJ_02108	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ABZJ_02110	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABZJ_02110	COG1902	pentaerythritol trinitrate reductase activity
ABZJ_02111	COG1846	Transcriptional regulator
ABZJ_02116	COG0753	catalase activity
ABZJ_02119	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_02122	COG3162	membrane
ABZJ_02124	COG3829	transcription factor binding
ABZJ_02125	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_02126	COG1960	acyl-CoA dehydrogenase activity
ABZJ_02130	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_02134	COG2186	Transcriptional regulator
ABZJ_02136	COG0583	DNA-binding transcription factor activity
ABZJ_02137	COG4948	Mandelate Racemase Muconate Lactonizing
ABZJ_02138	COG4829	muconolactone delta-isomerase
ABZJ_02140	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABZJ_02141	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABZJ_02142	COG0183	Belongs to the thiolase family
ABZJ_02143	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABZJ_02145	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_02147	COG3733	amine oxidase
ABZJ_02149	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABZJ_02151	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_02153	COG4638	Rieske (2fe-2S)
ABZJ_02157	COG0154	amidase activity
ABZJ_02160	COG2814	Major facilitator Superfamily
ABZJ_02165	COG1960	acyl-CoA dehydrogenase activity
ABZJ_02166	COG0583	DNA-binding transcription factor activity
ABZJ_02167	COG1414	Transcriptional regulator
ABZJ_02170	COG2391	methyltransferase activity
ABZJ_02172	COG4993	Dehydrogenase
ABZJ_02173	COG3659	wide pore channel activity
ABZJ_02174	COG3420	alginic acid biosynthetic process
ABZJ_02175	COG0710	3-dehydroquinate dehydratase activity
ABZJ_02176	COG3485	protocatechuate 3,4-dioxygenase
ABZJ_02177	COG3485	protocatechuate 3,4-dioxygenase
ABZJ_02178	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABZJ_02179	COG2271	Major facilitator Superfamily
ABZJ_02180	COG0596	Alpha beta hydrolase
ABZJ_02181	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABZJ_02182	COG0183	Belongs to the thiolase family
ABZJ_02183	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABZJ_02184	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABZJ_02186	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABZJ_02187	COG2323	membrane
ABZJ_02196	COG1902	pentaerythritol trinitrate reductase activity
ABZJ_02196	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABZJ_02199	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABZJ_02201	COG0542	response to heat
ABZJ_02202	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABZJ_02209	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABZJ_02210	COG0569	domain protein
ABZJ_02211	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABZJ_02214	COG4774	siderophore transport
ABZJ_02215	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABZJ_02217	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABZJ_02220	COG1294	oxidase, subunit
ABZJ_02221	COG4890	Cyd operon protein YbgT
ABZJ_02224	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABZJ_02226	COG0552	protein localization to endoplasmic reticulum
ABZJ_02231	COG0517	IMP dehydrogenase activity
ABZJ_02231	COG0516	GMP reductase activity
ABZJ_02232	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABZJ_02233	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABZJ_02235	COG0583	DNA-binding transcription factor activity
ABZJ_02236	COG0024	Methionine aminopeptidase
ABZJ_02242	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABZJ_02242	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABZJ_02243	COG1105	Belongs to the carbohydrate kinase PfkB family
ABZJ_02244	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABZJ_02244	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABZJ_02244	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABZJ_02249	COG5001	Diguanylate cyclase
ABZJ_02249	COG3300	MHYT domain
ABZJ_02252	COG2135	peptidase activity
ABZJ_02253	COG0659	secondary active sulfate transmembrane transporter activity
ABZJ_02256	COG1113	amino acid transport
ABZJ_02262	COG1011	Hydrolase
ABZJ_02263	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABZJ_02265	COG2137	regulation of response to DNA damage stimulus
ABZJ_02268	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABZJ_02275	COG0575	Belongs to the CDS family
ABZJ_02276	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABZJ_02281	COG3852	Histidine kinase
ABZJ_02282	COG2204	response regulator
ABZJ_02295	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABZJ_02296	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABZJ_02300	COG0697	spore germination
ABZJ_02301	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABZJ_02303	COG0303	'Molybdopterin
ABZJ_02304	COG0315	cyclic pyranopterin monophosphate synthase activity
ABZJ_02304	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABZJ_02307	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABZJ_02308	COG0243	molybdopterin cofactor binding
ABZJ_02310	COG0243	molybdopterin cofactor binding
ABZJ_02311	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABZJ_02312	COG2146	nitrite reductase [NAD(P)H] activity
ABZJ_02312	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABZJ_02314	COG0745	RESPONSE REGULATOR receiver
ABZJ_02315	COG1116	anion transmembrane transporter activity
ABZJ_02315	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABZJ_02318	COG0511	ligase activity, forming carbon-carbon bonds
ABZJ_02321	COG2814	Major facilitator Superfamily
ABZJ_02336	COG0739	heme binding
ABZJ_02343	COG1598	PFAM Uncharacterised protein family UPF0150
ABZJ_02395	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABZJ_02397	COG1454	alcohol dehydrogenase
ABZJ_02398	COG0824	Thioesterase
ABZJ_02401	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABZJ_02407	COG0183	Belongs to the thiolase family
ABZJ_02408	COG0583	DNA-binding transcription factor activity
ABZJ_02412	COG1522	sequence-specific DNA binding
ABZJ_02413	COG3135	benzoate transporter
ABZJ_02415	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABZJ_02420	COG0589	response to stress
ABZJ_02421	COG0488	(ABC) transporter
ABZJ_02426	COG4773	Receptor
ABZJ_02433	COG0668	transmembrane transport
ABZJ_02436	COG1309	transcriptional regulator
ABZJ_02439	COG1605	Chorismate mutase
ABZJ_02441	COG4221	oxidoreductase activity
ABZJ_02443	COG0308	aminopeptidase N
ABZJ_02447	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ABZJ_02449	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABZJ_02450	COG1454	alcohol dehydrogenase
ABZJ_02454	COG0531	amino acid
ABZJ_02455	COG4303	Ethanolamine ammonia lyase large subunit
ABZJ_02456	COG4302	ethanolamine ammonia-lyase activity
ABZJ_02457	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABZJ_02457	COG0519	Catalyzes the synthesis of GMP from XMP
ABZJ_02461	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABZJ_02464	COG0697	spore germination
ABZJ_02465	COG1923	regulation of RNA biosynthetic process
ABZJ_02467	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABZJ_02468	COG0802	atpase or kinase
ABZJ_02471	COG1187	pseudouridine synthase activity
ABZJ_02475	COG0583	DNA-binding transcription factor activity
ABZJ_02478	COG2814	Major facilitator Superfamily
ABZJ_02479	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABZJ_02484	COG0729	surface antigen
ABZJ_02488	COG0174	glutamine synthetase
ABZJ_02489	COG0745	RESPONSE REGULATOR receiver
ABZJ_02490	COG2205	protein histidine kinase activity
ABZJ_02492	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABZJ_02493	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABZJ_02498	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABZJ_02499	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABZJ_02500	COG1960	acyl-CoA dehydrogenase activity
ABZJ_02503	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABZJ_02504	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABZJ_02508	COG0583	DNA-binding transcription factor activity
ABZJ_02511	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABZJ_02513	COG3658	cytochrome
ABZJ_02514	COG1215	transferase activity, transferring glycosyl groups
ABZJ_02515	COG1649	PFAM Uncharacterised BCR, COG1649
ABZJ_02515	COG0726	polysaccharide deacetylase
ABZJ_02520	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABZJ_02521	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABZJ_02523	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABZJ_02528	COG0305	Participates in initiation and elongation during chromosome replication
ABZJ_02529	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABZJ_02531	COG1305	Transglutaminase-like
ABZJ_02533	COG2308	Evidence 4 Homologs of previously reported genes of
ABZJ_02540	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABZJ_02541	COG0138	bifunctional purine biosynthesis protein purh
ABZJ_02542	COG0151	Belongs to the GarS family
ABZJ_02543	COG1464	Belongs to the NlpA lipoprotein family
ABZJ_02544	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABZJ_02545	COG2011	ABC-type metal ion transport system permease component
ABZJ_02546	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABZJ_02548	COG1301	dicarboxylic acid transport
ABZJ_02552	COG3316	Transposase and inactivated derivatives
ABZJ_02553	COG0786	glutamate:sodium symporter activity
ABZJ_02554	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABZJ_02559	COG3111	PFAM Bacterial OB fold (BOF) protein
ABZJ_02574	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABZJ_02575	COG1610	YqeY-like protein
ABZJ_02576	COG4783	chaperone-mediated protein folding
ABZJ_02581	COG1286	toxin biosynthetic process
ABZJ_02651	COG0778	Nitroreductase
ABZJ_02653	COG0513	Belongs to the DEAD box helicase family
ABZJ_02657	COG2363	Small membrane protein
ABZJ_02663	COG1234	tRNA 3'-trailer cleavage
ABZJ_02664	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABZJ_02666	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABZJ_02668	COG2819	hydrolase of the alpha beta superfamily
ABZJ_02669	COG1960	acyl-CoA dehydrogenase activity
ABZJ_02670	COG1301	dicarboxylic acid transport
ABZJ_02671	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABZJ_02672	COG3139	Protein of unknown function (DUF1315)
ABZJ_02673	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABZJ_02674	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABZJ_02676	COG0494	nUDIX hydrolase
ABZJ_02678	COG0642	Histidine kinase
ABZJ_02679	COG0745	RESPONSE REGULATOR receiver
ABZJ_02683	COG1720	tRNA m6t6A37 methyltransferase activity
ABZJ_02686	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABZJ_02688	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABZJ_02690	COG4598	ABC transporter
ABZJ_02691	COG4160	amino acid transport
ABZJ_02692	COG4215	(ABC) transporter
ABZJ_02696	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABZJ_02698	COG1538	Outer membrane efflux protein
ABZJ_02704	COG1131	(ABC) transporter
ABZJ_02705	COG0842	Transport permease protein
ABZJ_02708	COG0772	Belongs to the SEDS family
ABZJ_02709	COG2951	lytic endotransglycosylase activity
ABZJ_02715	COG2207	Transcriptional regulator
ABZJ_02718	COG0052	Belongs to the universal ribosomal protein uS2 family
ABZJ_02719	COG0024	Methionine aminopeptidase
ABZJ_02721	COG2223	nitrite transmembrane transporter activity
ABZJ_02724	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABZJ_02725	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABZJ_02726	COG1960	acyl-CoA dehydrogenase activity
ABZJ_02729	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABZJ_02730	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABZJ_02731	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABZJ_02735	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABZJ_02736	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABZJ_02737	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABZJ_02741	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABZJ_02744	COG3104	oligopeptide transport
ABZJ_02746	COG0512	Glutamine amidotransferase of anthranilate synthase
ABZJ_02747	COG0308	aminopeptidase N
ABZJ_02753	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABZJ_02761	COG3739	integral membrane protein
ABZJ_02764	COG1169	isochorismate synthase
ABZJ_02766	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABZJ_02768	COG1132	(ABC) transporter
ABZJ_02771	COG3433	isochorismatase activity
ABZJ_02771	COG1535	isochorismatase
ABZJ_02772	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABZJ_02773	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABZJ_02775	COG4774	siderophore transport
ABZJ_02776	COG4607	ABC-type enterochelin transport system periplasmic component
ABZJ_02777	COG4604	ABC transporter, ATP-binding protein
ABZJ_02778	COG4605	iron ion homeostasis
ABZJ_02779	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABZJ_02781	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABZJ_02784	COG2964	Protein conserved in bacteria
ABZJ_02786	COG1741	Belongs to the pirin family
ABZJ_02791	COG1309	transcriptional regulator
ABZJ_02793	COG4948	Mandelate Racemase Muconate Lactonizing
ABZJ_02794	COG2814	Major facilitator Superfamily
ABZJ_02801	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABZJ_02801	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABZJ_02802	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABZJ_02805	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABZJ_02806	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABZJ_02807	COG0583	DNA-binding transcription factor activity
ABZJ_02809	COG1113	amino acid transport
ABZJ_02814	COG2508	Transcriptional regulator
ABZJ_02814	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ABZJ_02820	COG2879	small protein
ABZJ_02821	COG1966	Carbon starvation protein
ABZJ_02832	COG0776	regulation of translation
ABZJ_02839	COG3409	Peptidoglycan-binding domain 1 protein
ABZJ_02839	COG3267	Type II secretory pathway component ExeA
ABZJ_02845	COG0681	Belongs to the peptidase S26 family
ABZJ_02852	COG4373	Mu-like prophage FluMu protein gp28
ABZJ_02855	COG4383	Mu-like prophage protein gp29
ABZJ_02856	COG2369	cell adhesion
ABZJ_02857	COG5005	Phage virion morphogenesis
ABZJ_02860	COG4397	Mu-like prophage major head subunit gpT
ABZJ_02884	COG1067	ATP-dependent peptidase activity
ABZJ_02885	COG0583	DNA-binding transcription factor activity
ABZJ_02890	COG1686	Belongs to the peptidase S11 family
ABZJ_02891	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABZJ_02898	COG0616	signal peptide processing
ABZJ_02899	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABZJ_02901	COG0573	inorganic phosphate transmembrane transporter activity
ABZJ_02902	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABZJ_02903	COG1113	amino acid transport
ABZJ_02904	COG3961	Belongs to the TPP enzyme family
ABZJ_02905	COG1522	sequence-specific DNA binding
ABZJ_02907	COG0076	glutamate decarboxylase activity
ABZJ_02908	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABZJ_02910	COG1309	transcriptional regulator
ABZJ_02913	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABZJ_02920	COG0352	thiamine-phosphate diphosphorylase activity
ABZJ_02925	COG0612	Peptidase, M16
ABZJ_02928	COG0583	DNA-binding transcription factor activity
ABZJ_02929	COG0477	Major facilitator Superfamily
ABZJ_02934	COG1187	pseudouridine synthase activity
ABZJ_02937	COG1686	Belongs to the peptidase S11 family
ABZJ_02938	COG1252	NADH dehydrogenase
ABZJ_02940	COG0415	Belongs to the DNA photolyase family
ABZJ_02945	COG2433	Pfam Transposase IS66
ABZJ_02948	COG1215	transferase activity, transferring glycosyl groups
ABZJ_02954	COG2070	2-Nitropropane dioxygenase
ABZJ_02965	COG0556	nucleotide-excision repair
ABZJ_02973	COG4221	oxidoreductase activity
ABZJ_02975	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABZJ_02976	COG1381	Involved in DNA repair and RecF pathway recombination
ABZJ_02978	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABZJ_02981	COG0681	Belongs to the peptidase S26 family
ABZJ_02984	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABZJ_02988	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABZJ_02989	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABZJ_02990	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABZJ_02992	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABZJ_02994	COG4208	sulfate ABC transporter
ABZJ_02995	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABZJ_02996	COG0583	DNA-binding transcription factor activity
ABZJ_02997	COG4625	pathogenesis
ABZJ_03000	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABZJ_03003	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABZJ_03005	COG1051	belongs to the nudix hydrolase family
ABZJ_03005	COG1056	cytidyltransferase-related domain
ABZJ_03006	COG1024	Enoyl-CoA hydratase
ABZJ_03007	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABZJ_03010	COG2814	Major facilitator Superfamily
ABZJ_03011	COG0047	phosphoribosylformylglycinamidine synthase activity
ABZJ_03011	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABZJ_03015	COG1473	amidohydrolase
ABZJ_03016	COG0824	Thioesterase
ABZJ_03020	COG0823	Involved in the tonB-independent uptake of proteins
ABZJ_03024	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABZJ_03031	COG0628	permease
ABZJ_03033	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABZJ_03034	COG0596	Alpha beta hydrolase
ABZJ_03035	COG0616	signal peptide processing
ABZJ_03035	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABZJ_03037	COG2333	competence protein COMEC
ABZJ_03037	COG0658	competence protein
ABZJ_03038	COG1136	(ABC) transporter
ABZJ_03039	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABZJ_03047	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABZJ_03051	COG0463	Glycosyl transferase, family 2
ABZJ_03057	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABZJ_03058	COG1280	lysine exporter protein (LysE YggA)
ABZJ_03060	COG0019	diaminopimelate decarboxylase activity
ABZJ_03062	COG1113	amino acid transport
ABZJ_03066	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABZJ_03068	COG3339	Conserved Protein
ABZJ_03070	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABZJ_03071	COG0243	molybdopterin cofactor binding
ABZJ_03072	COG1929	Belongs to the glycerate kinase type-1 family
ABZJ_03075	COG0778	Nitroreductase
ABZJ_03081	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABZJ_03083	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABZJ_03087	COG0741	lytic transglycosylase activity
ABZJ_03091	COG0584	glycerophosphoryl diester phosphodiesterase
ABZJ_03092	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABZJ_03097	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABZJ_03101	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABZJ_03102	COG0477	Major facilitator Superfamily
ABZJ_03109	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABZJ_03110	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABZJ_03115	COG0505	Belongs to the CarA family
ABZJ_03119	COG0589	response to stress
ABZJ_03122	COG2843	Capsule synthesis protein
ABZJ_03127	COG2321	neutral zinc metallopeptidase
ABZJ_03128	COG2354	Protein conserved in bacteria
ABZJ_03132	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABZJ_03137	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABZJ_03138	COG1053	succinate dehydrogenase
ABZJ_03139	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABZJ_03140	COG2009	succinate dehydrogenase
ABZJ_03149	COG2921	Belongs to the UPF0250 family
ABZJ_03150	COG0321	lipoyl(octanoyl) transferase activity
ABZJ_03153	COG0531	amino acid
ABZJ_03155	COG1733	regulation of RNA biosynthetic process
ABZJ_03156	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABZJ_03157	COG1648	precorrin-2 dehydrogenase activity
ABZJ_03157	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABZJ_03160	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABZJ_03166	COG0671	phosphoesterase, PA-phosphatase related
ABZJ_03167	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABZJ_03169	COG1538	Outer membrane efflux protein
ABZJ_03170	COG0393	Putative heavy-metal-binding
ABZJ_03171	COG0393	Putative heavy-metal-binding
ABZJ_03173	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_03175	COG0525	valine-tRNA ligase activity
ABZJ_03179	COG0583	DNA-binding transcription factor activity
ABZJ_03180	COG0004	ammonium transporteR
ABZJ_03182	COG0642	Histidine kinase
ABZJ_03183	COG0745	RESPONSE REGULATOR receiver
ABZJ_03184	COG2194	sulfuric ester hydrolase activity
ABZJ_03189	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABZJ_03192	COG2315	Protein conserved in bacteria
ABZJ_03193	COG0142	geranyltranstransferase activity
ABZJ_03194	COG2828	Protein conserved in bacteria
ABZJ_03196	COG1113	amino acid transport
ABZJ_03199	COG2207	Transcriptional regulator
ABZJ_03205	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABZJ_03209	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABZJ_03211	COG1530	ribonuclease E activity
ABZJ_03212	COG0424	maF-like protein
ABZJ_03213	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABZJ_03214	COG1792	Involved in formation and maintenance of cell shape
ABZJ_03215	COG1077	Cell shape determining protein MreB Mrl
ABZJ_03216	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABZJ_03218	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABZJ_03224	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABZJ_03225	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABZJ_03226	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABZJ_03227	COG1115	amino acid carrier protein
ABZJ_03231	COG2814	Major facilitator Superfamily
ABZJ_03232	COG1289	transmembrane transporter activity
ABZJ_03236	COG1376	ErfK ybiS ycfS ynhG family protein
ABZJ_03237	COG2832	Protein of unknown function (DUF454)
ABZJ_03239	COG5510	response to toxic substance
ABZJ_03243	COG0840	transmembrane signaling receptor activity
ABZJ_03251	COG3422	double-strand break repair
ABZJ_03252	COG2824	Alkylphosphonate utilization operon protein PhnA
ABZJ_03253	COG3189	MarR family transcriptional regulator
ABZJ_03255	COG0354	folic acid binding
ABZJ_03256	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABZJ_03258	COG0679	Auxin Efflux Carrier
ABZJ_03259	COG1902	pentaerythritol trinitrate reductase activity
ABZJ_03262	COG2094	Belongs to the DNA glycosylase MPG family
ABZJ_03268	COG2233	PERMEase
ABZJ_03270	COG0833	amino acid
ABZJ_03271	COG1690	Belongs to the RtcB family
ABZJ_03273	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABZJ_03273	COG2885	chlorophyll binding
ABZJ_03275	COG0183	Belongs to the thiolase family
ABZJ_03279	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABZJ_03284	COG2207	Transcriptional regulator
ABZJ_03285	COG0183	Belongs to the thiolase family
ABZJ_03290	COG1272	protein, Hemolysin III
ABZJ_03291	COG0477	Major facilitator Superfamily
ABZJ_03294	COG0450	alkyl hydroperoxide reductase
ABZJ_03298	COG0285	dihydrofolate synthase activity
ABZJ_03306	COG0133	tryptophan synthase activity
ABZJ_03309	COG2096	Adenosyltransferase
ABZJ_03313	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABZJ_03314	COG0745	RESPONSE REGULATOR receiver
ABZJ_03315	COG2205	protein histidine kinase activity
ABZJ_03317	COG1960	acyl-CoA dehydrogenase activity
ABZJ_03318	COG1960	acyl-CoA dehydrogenase activity
ABZJ_03319	COG0583	DNA-binding transcription factor activity
ABZJ_03320	COG0625	glutathione transferase activity
ABZJ_03334	COG0438	transferase activity, transferring glycosyl groups
ABZJ_03335	COG0463	Glycosyl transferase, family 2
ABZJ_03336	COG0726	polysaccharide deacetylase
ABZJ_03340	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABZJ_03341	COG2205	protein histidine kinase activity
ABZJ_03350	COG1862	Preprotein translocase
ABZJ_03352	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABZJ_03353	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABZJ_03355	COG3781	membrane
ABZJ_03357	COG0613	PHP domain protein
ABZJ_03358	COG2350	Protein conserved in bacteria
ABZJ_03364	COG1607	acyl-coa hydrolase
ABZJ_03367	COG3453	Protein conserved in bacteria
ABZJ_03367	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABZJ_03371	COG2199	diguanylate cyclase activity
ABZJ_03373	COG1408	metallophosphoesterase
ABZJ_03374	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABZJ_03376	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABZJ_03380	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABZJ_03381	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABZJ_03384	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABZJ_03386	COG2969	positive regulation of protein catabolic process
ABZJ_03390	COG1960	acyl-CoA dehydrogenase activity
ABZJ_03391	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABZJ_03394	COG1309	transcriptional regulator
ABZJ_03395	COG1960	acyl-CoA dehydrogenase activity
ABZJ_03399	COG1183	phosphatidylcholine synthase activity
ABZJ_03400	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABZJ_03406	COG1196	nuclear chromosome segregation
ABZJ_03406	COG0741	lytic transglycosylase activity
ABZJ_03406	COG0739	heme binding
ABZJ_03408	COG1702	phosphate starvation-inducible protein PhoH
ABZJ_03415	COG1295	ribonuclease BN
ABZJ_03416	COG0697	spore germination
ABZJ_03417	COG2169	Transcriptional regulator
ABZJ_03418	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABZJ_03423	COG0557	exoribonuclease II activity
ABZJ_03424	COG0339	signal peptide processing
ABZJ_03425	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABZJ_03432	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABZJ_03433	COG1960	acyl-CoA dehydrogenase activity
ABZJ_03438	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABZJ_03440	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABZJ_03464	COG0626	cystathionine gamma-synthase activity
ABZJ_03465	COG0433	COG0433 Predicted ATPase
ABZJ_03466	COG1017	nitric oxide dioxygenase activity
ABZJ_03466	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABZJ_03467	COG1959	2 iron, 2 sulfur cluster binding
ABZJ_03470	COG1301	dicarboxylic acid transport
ABZJ_03471	COG1946	Acyl-CoA thioesterase
ABZJ_03475	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABZJ_03476	COG1040	competence protein
ABZJ_03477	COG0494	nUDIX hydrolase
ABZJ_03479	COG0598	Magnesium transport protein CorA
ABZJ_03482	COG2854	intermembrane phospholipid transfer
ABZJ_03484	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABZJ_03485	COG1127	ABC transporter
ABZJ_03487	COG0513	Belongs to the DEAD box helicase family
ABZJ_03491	COG0408	coproporphyrinogen oxidase activity
ABZJ_03494	COG1960	acyl-CoA dehydrogenase activity
ABZJ_03496	COG1983	PspC domain protein
ABZJ_03497	COG0517	IMP dehydrogenase activity
ABZJ_03506	COG0583	DNA-binding transcription factor activity
ABZJ_03514	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_03516	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABZJ_03517	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABZJ_03520	COG0833	amino acid
ABZJ_03526	COG1192	Involved in chromosome partitioning
ABZJ_03527	COG0628	permease
ABZJ_03529	COG1289	transmembrane transporter activity
ABZJ_03532	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABZJ_03534	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABZJ_03536	COG0277	FAD linked oxidase domain protein
ABZJ_03537	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABZJ_03542	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABZJ_03543	COG5380	lipid catabolic process
ABZJ_03547	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABZJ_03557	COG0194	GDP metabolic process
ABZJ_03559	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABZJ_03563	COG3307	-O-antigen
ABZJ_03567	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABZJ_03568	COG1704	LemA family
ABZJ_03570	COG0493	'glutamate synthase
ABZJ_03571	COG0067	glutamate synthase
ABZJ_03571	COG0070	glutamate synthase
ABZJ_03571	COG0069	glutamate synthase activity
ABZJ_03581	COG2226	methyltransferase
ABZJ_03584	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABZJ_03585	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABZJ_03593	COG0833	amino acid
ABZJ_03612	COG0488	(ABC) transporter
ABZJ_03614	COG4221	oxidoreductase activity
ABZJ_03615	COG0659	secondary active sulfate transmembrane transporter activity
ABZJ_03617	COG0745	RESPONSE REGULATOR receiver
ABZJ_03619	COG0427	acetyl-CoA hydrolase
ABZJ_03623	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABZJ_03629	COG2329	Antibiotic biosynthesis monooxygenase
ABZJ_03632	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABZJ_03644	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABZJ_03645	COG1733	regulation of RNA biosynthetic process
ABZJ_03652	COG0667	Aldo Keto reductase
ABZJ_03656	COG0583	DNA-binding transcription factor activity
ABZJ_03657	COG2814	Major facilitator Superfamily
ABZJ_03664	COG1335	isochorismatase
ABZJ_03666	COG1012	belongs to the aldehyde dehydrogenase family
ABZJ_03667	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABZJ_03669	COG1113	amino acid transport
ABZJ_03671	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABZJ_03674	COG2814	Major facilitator Superfamily
ABZJ_03679	COG1309	transcriptional regulator
ABZJ_03680	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABZJ_03683	COG3706	GGDEF domain
ABZJ_03685	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABZJ_03687	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABZJ_03688	COG3162	membrane
ABZJ_03689	COG0784	Response regulator, receiver
ABZJ_03689	COG2205	protein histidine kinase activity
ABZJ_03689	COG2198	Histidine kinase
ABZJ_03694	COG3328	transposase activity
ABZJ_03695	COG1522	sequence-specific DNA binding
ABZJ_03696	COG1335	isochorismatase
ABZJ_03697	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABZJ_03699	COG0668	transmembrane transport
ABZJ_03700	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABZJ_03701	COG1519	Transferase
ABZJ_03702	COG1902	pentaerythritol trinitrate reductase activity
ABZJ_03707	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABZJ_03712	COG0426	domain, Protein
ABZJ_03712	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABZJ_03713	COG4774	siderophore transport
ABZJ_03714	COG2119	membrane
ABZJ_03716	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABZJ_03718	COG4942	peptidase
ABZJ_03721	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABZJ_03723	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABZJ_03727	COG0189	ligase activity
ABZJ_03731	COG0708	Exodeoxyribonuclease III
ABZJ_03732	COG1393	Belongs to the ArsC family
ABZJ_03735	COG3706	GGDEF domain
ABZJ_03742	COG2351	hydroxyisourate hydrolase activity
ABZJ_03743	COG2233	PERMEase
ABZJ_03745	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABZJ_03747	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABZJ_03748	COG1028	Short-chain dehydrogenase reductase Sdr
ABZJ_03751	COG3150	esterase
ABZJ_03754	COG3501	Rhs element vgr protein
ABZJ_03756	COG2918	glutathione biosynthetic process
ABZJ_03759	COG2733	membrane
ABZJ_03760	COG0436	Aminotransferase
ABZJ_03761	COG0534	Mate efflux family protein
ABZJ_03781	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABZJ_03782	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABZJ_03784	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABZJ_03785	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABZJ_03788	COG0010	Belongs to the arginase family
ABZJ_03795	COG2188	Transcriptional regulator
ABZJ_03797	COG0523	cobalamin synthesis protein
ABZJ_03799	COG1113	amino acid transport
ABZJ_03801	COG0625	glutathione transferase activity
ABZJ_03805	COG1683	Conserved Protein
ABZJ_03806	COG0534	Mate efflux family protein
ABZJ_03807	COG0385	Bile acid
ABZJ_03808	COG1335	isochorismatase
ABZJ_03809	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABZJ_03814	COG2116	formate transmembrane transporter activity
ABZJ_03815	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABZJ_03816	COG2133	pyrroloquinoline quinone binding
ABZJ_03817	COG2983	Belongs to the UPF0260 family
ABZJ_03821	COG1194	a g-specific adenine glycosylase
ABZJ_03824	COG2818	Glycosylase
ABZJ_03825	COG1064	alcohol dehydrogenase
ABZJ_03827	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABZJ_03829	COG0583	DNA-binding transcription factor activity
ABZJ_03830	COG0656	L-ascorbic acid biosynthetic process
ABZJ_03831	COG2814	Major facilitator Superfamily
ABZJ_03838	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABZJ_03841	COG2233	PERMEase
ABZJ_03849	COG0733	neurotransmitter:sodium symporter activity
ABZJ_03854	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABZJ_03855	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABZJ_03856	COG0596	Alpha beta hydrolase
ABZJ_03862	COG0488	(ABC) transporter
ABZJ_03863	COG0586	Pfam SNARE associated Golgi protein
ABZJ_04020	COG4772	TonB-dependent receptor
ABZJ_04180	COG0351	phosphomethylpyrimidine kinase
ABZJ_04180	COG0352	thiamine-phosphate diphosphorylase activity
ABZJ_04180	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABZJ_04185	COG1388	LysM domain
ABZJ_04185	COG0791	NLP P60 protein
ABZJ_04270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABZJ_04365	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABZJ_04490	COG0037	tRNA processing
ABZJ_04540	COG0583	DNA-binding transcription factor activity
ABZJ_04635	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABZJ_04895	COG1522	sequence-specific DNA binding
ABZJ_04980	COG3316	Transposase and inactivated derivatives
ABZJ_05005	COG2433	Pfam Transposase IS66
ABZJ_05015	COG3173	Aminoglycoside phosphotransferase
ABZJ_05035	COG0482	sulfurtransferase activity
ABZJ_05080	COG3316	Transposase and inactivated derivatives