locus-tag class description LQS91_00005 PF00579 tRNA synthetases class I (W and Y) LQS91_00010 PF03702 Anhydro-N-acetylmuramic acid kinase LQS91_00015 PF00561 alpha/beta hydrolase fold LQS91_00020 PF01521 Iron-sulphur cluster biosynthesis LQS91_00040 PF00005 ABC transporter LQS91_00040 PF12848 ABC transporter LQS91_00045 PF09335 SNARE associated Golgi protein LQS91_00055 PF00204 DNA gyrase B LQS91_00055 PF00986 DNA gyrase B subunit, carboxyl terminus LQS91_00055 PF18053 DNA gyrase B subunit insert domain LQS91_00055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_00055 PF01751 Toprim domain LQS91_00060 PF02463 RecF/RecN/SMC N terminal domain LQS91_00065 PF02768 DNA polymerase III beta subunit, C-terminal domain LQS91_00065 PF02767 DNA polymerase III beta subunit, central domain LQS91_00065 PF00712 DNA polymerase III beta subunit, N-terminal domain LQS91_00070 PF00308 Bacterial dnaA protein LQS91_00070 PF08299 Bacterial dnaA protein helix-turn-helix LQS91_00070 PF11638 DnaA N-terminal domain LQS91_00075 PF00468 Ribosomal protein L34 LQS91_00080 PF00825 Ribonuclease P LQS91_00085 PF01809 Putative membrane protein insertion efficiency factor LQS91_00090 PF02096 60Kd inner membrane protein LQS91_00090 PF14849 YidC periplasmic domain LQS91_00095 PF01926 50S ribosome-binding GTPase LQS91_00095 PF12631 MnmE helical domain LQS91_00095 PF10396 GTP-binding protein TrmE N-terminus LQS91_00100 PF02583 Metal-sensitive transcriptional repressor LQS91_00105 PF01545 Cation efflux family LQS91_00105 PF16916 Dimerisation domain of Zinc Transporter LQS91_00110 PF10411 Disulfide bond isomerase protein N-terminus LQS91_00110 PF13098 Thioredoxin-like domain LQS91_00120 PF00156 Phosphoribosyl transferase domain LQS91_00125 PF01979 Amidohydrolase family LQS91_00130 PF00355 Rieske [2Fe-2S] domain LQS91_00135 PF03738 Glutathionylspermidine synthase preATP-grasp LQS91_00145 PF03741 Integral membrane protein TerC family LQS91_00150 PF01569 PAP2 superfamily LQS91_00160 PF02875 Mur ligase family, glutamate ligase domain LQS91_00160 PF01225 Mur ligase family, catalytic domain LQS91_00160 PF08245 Mur ligase middle domain LQS91_00170 PF00731 AIR carboxylase LQS91_00175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LQS91_00175 PF02222 ATP-grasp domain LQS91_00180 PF13406 Transglycosylase SLT domain LQS91_00200 PF00012 Hsp70 protein LQS91_00205 PF01025 GrpE LQS91_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_00210 PF03466 LysR substrate binding domain LQS91_00230 PF07859 alpha/beta hydrolase fold LQS91_00235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQS91_00275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQS91_00280 PF01252 Signal peptidase (SPase) II LQS91_00285 PF08264 Anticodon-binding domain of tRNA LQS91_00285 PF00133 tRNA synthetases class I (I, L, M and V) LQS91_00285 PF06827 Zinc finger found in FPG and IleRS LQS91_00290 PF06574 FAD synthetase LQS91_00290 PF01687 Riboflavin kinase LQS91_00300 PF01048 Phosphorylase superfamily LQS91_00305 PF08362 YcdC-like protein, C-terminal region LQS91_00305 PF00440 Bacterial regulatory proteins, tetR family LQS91_00310 PF00005 ABC transporter LQS91_00315 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_00320 PF00296 Luciferase-like monooxygenase LQS91_00325 PF09084 NMT1/THI5 like LQS91_00330 PF09084 NMT1/THI5 like LQS91_00335 PF00696 Amino acid kinase family LQS91_00335 PF00583 Acetyltransferase (GNAT) family LQS91_00350 PF00106 short chain dehydrogenase LQS91_00355 PF13419 Haloacid dehalogenase-like hydrolase LQS91_00365 PF01323 DSBA-like thioredoxin domain LQS91_00370 PF08360 QacR-like protein, C-terminal region LQS91_00370 PF00440 Bacterial regulatory proteins, tetR family LQS91_00375 PF00440 Bacterial regulatory proteins, tetR family LQS91_00380 PF00175 Oxidoreductase NAD-binding domain LQS91_00385 PF00487 Fatty acid desaturase LQS91_00390 PF03725 3' exoribonuclease family, domain 2 LQS91_00390 PF01138 3' exoribonuclease family, domain 1 LQS91_00395 PF04185 Phosphoesterase family LQS91_00395 PF05506 Domain of unknown function (DUF756) LQS91_00405 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LQS91_00405 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LQS91_00410 PF01510 N-acetylmuramoyl-L-alanine amidase LQS91_00415 PF03023 Lipid II flippase MurJ LQS91_00420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQS91_00420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQS91_00425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LQS91_00425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQS91_00430 PF13807 G-rich domain on putative tyrosine kinase LQS91_00430 PF02706 Chain length determinant protein LQS91_00430 PF13614 AAA domain LQS91_00435 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQS91_00440 PF02563 Polysaccharide biosynthesis/export protein LQS91_00440 PF10531 SLBB domain LQS91_00440 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LQS91_00445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQS91_00445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQS91_00445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQS91_00450 PF01370 NAD dependent epimerase/dehydratase family LQS91_00460 PF00534 Glycosyl transferases group 1 LQS91_00460 PF13439 Glycosyltransferase Family 4 LQS91_00470 PF01168 Alanine racemase, N-terminal domain LQS91_00470 PF01757 Acyltransferase family LQS91_00470 PF00842 Alanine racemase, C-terminal domain LQS91_00475 PF00534 Glycosyl transferases group 1 LQS91_00475 PF13477 Glycosyl transferase 4-like LQS91_00480 PF02397 Bacterial sugar transferase LQS91_00485 PF17836 PglD N-terminal domain LQS91_00485 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_00485 PF14602 Hexapeptide repeat of succinyl-transferase LQS91_00490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LQS91_00495 PF02719 Polysaccharide biosynthesis protein LQS91_00500 PF00483 Nucleotidyl transferase LQS91_00505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LQS91_00505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LQS91_00505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LQS91_00510 PF00342 Phosphoglucose isomerase LQS91_00515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQS91_00515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQS91_00515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQS91_00515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQS91_00520 PF02652 L-lactate permease LQS91_00525 PF07729 FCD domain LQS91_00525 PF00392 Bacterial regulatory proteins, gntR family LQS91_00530 PF01070 FMN-dependent dehydrogenase LQS91_00535 PF09330 D-lactate dehydrogenase, membrane binding LQS91_00535 PF01565 FAD binding domain LQS91_00540 PF00155 Aminotransferase class I and II LQS91_00545 PF00392 Bacterial regulatory proteins, gntR family LQS91_00545 PF07729 FCD domain LQS91_00555 PF00285 Citrate synthase, C-terminal domain LQS91_00560 PF00330 Aconitase family (aconitate hydratase) LQS91_00560 PF00694 Aconitase C-terminal domain LQS91_00610 PF00849 RNA pseudouridylate synthase LQS91_00625 PF07715 TonB-dependent Receptor Plug Domain LQS91_00625 PF00593 TonB dependent receptor LQS91_00635 PF01037 Lrp/AsnC ligand binding domain LQS91_00640 PF01266 FAD dependent oxidoreductase LQS91_00645 PF00842 Alanine racemase, C-terminal domain LQS91_00645 PF01168 Alanine racemase, N-terminal domain LQS91_00650 PF01042 Endoribonuclease L-PSP LQS91_00655 PF00324 Amino acid permease LQS91_00660 PF00324 Amino acid permease LQS91_00670 PF00171 Aldehyde dehydrogenase family LQS91_00675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQS91_00675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQS91_00680 PF13193 AMP-binding enzyme C-terminal domain LQS91_00680 PF00501 AMP-binding enzyme LQS91_00685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_00685 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_00685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_00690 PF00378 Enoyl-CoA hydratase/isomerase LQS91_00695 PF00378 Enoyl-CoA hydratase/isomerase LQS91_00700 PF00083 Sugar (and other) transporter LQS91_00700 PF07690 Major Facilitator Superfamily LQS91_00705 PF00765 Autoinducer synthase LQS91_00715 PF00196 Bacterial regulatory proteins, luxR family LQS91_00715 PF03472 Autoinducer binding domain LQS91_00720 PF00501 AMP-binding enzyme LQS91_00725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_00725 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_00725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_00730 PF00550 Phosphopantetheine attachment site LQS91_00730 PF14765 Polyketide synthase dehydratase LQS91_00730 PF08242 Methyltransferase domain LQS91_00730 PF02801 Beta-ketoacyl synthase, C-terminal domain LQS91_00730 PF00109 Beta-ketoacyl synthase, N-terminal domain LQS91_00730 PF16197 Ketoacyl-synthetase C-terminal extension LQS91_00730 PF00975 Thioesterase domain LQS91_00735 PF00550 Phosphopantetheine attachment site LQS91_00735 PF00501 AMP-binding enzyme LQS91_00735 PF13193 AMP-binding enzyme C-terminal domain LQS91_00735 PF00975 Thioesterase domain LQS91_00735 PF00668 Condensation domain LQS91_00750 PF12697 Alpha/beta hydrolase family LQS91_00755 PF01648 4'-phosphopantetheinyl transferase superfamily LQS91_00770 PF01722 BolA-like protein LQS91_00780 PF13614 AAA domain LQS91_00795 PF09335 SNARE associated Golgi protein LQS91_00800 PF07681 DoxX LQS91_00805 PF04286 Protein of unknown function (DUF445) LQS91_00810 PF00958 GMP synthase C terminal domain LQS91_00810 PF02540 NAD synthase LQS91_00810 PF00117 Glutamine amidotransferase class-I LQS91_00815 PF13427 Domain of unknown function (DUF4111) LQS91_00815 PF01909 Nucleotidyltransferase domain LQS91_00820 PF03551 Transcriptional regulator PadR-like family LQS91_00830 PF05726 Pirin C-terminal cupin domain LQS91_00830 PF02678 Pirin LQS91_00850 PF03485 Arginyl tRNA synthetase N terminal domain LQS91_00850 PF05746 DALR anticodon binding domain LQS91_00850 PF00750 tRNA synthetases class I (R) LQS91_00855 PF00390 Malic enzyme, N-terminal domain LQS91_00855 PF03949 Malic enzyme, NAD binding domain LQS91_00860 PF04261 Dyp-type peroxidase family LQS91_00865 PF01810 LysE type translocator LQS91_00870 PF00950 ABC 3 transport family LQS91_00875 PF00005 ABC transporter LQS91_00895 PF00119 ATP synthase A chain LQS91_00900 PF00137 ATP synthase subunit C LQS91_00905 PF00430 ATP synthase B/B' CF(0) LQS91_00910 PF00213 ATP synthase delta (OSCP) subunit LQS91_00915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQS91_00915 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQS91_00915 PF00306 ATP synthase alpha/beta chain, C terminal domain LQS91_00920 PF00231 ATP synthase LQS91_00925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQS91_00925 PF02874 ATP synthase alpha/beta family, beta-barrel domain LQS91_00930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LQS91_00940 PF00255 Glutathione peroxidase LQS91_00950 PF07690 Major Facilitator Superfamily LQS91_00955 PF00440 Bacterial regulatory proteins, tetR family LQS91_00960 PF00892 EamA-like transporter family LQS91_00965 PF01300 Telomere recombination LQS91_00970 PF02481 DNA recombination-mediator protein A LQS91_00970 PF17782 DprA winged helix domain LQS91_00980 PF01327 Polypeptide deformylase LQS91_01040 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_01070 PF04055 Radical SAM superfamily LQS91_01070 PF11842 Domain of unknown function (DUF3362) LQS91_01070 PF08497 Radical SAM N-terminal LQS91_01090 PF00817 impB/mucB/samB family LQS91_01090 PF11799 impB/mucB/samB family C-terminal domain LQS91_01090 PF11798 IMS family HHH motif LQS91_01100 PF07690 Major Facilitator Superfamily LQS91_01105 PF03641 Possible lysine decarboxylase LQS91_01110 PF03471 Transporter associated domain LQS91_01110 PF03741 Integral membrane protein TerC family LQS91_01115 PF02810 SEC-C motif LQS91_01120 PF03458 UPF0126 domain LQS91_01125 PF07690 Major Facilitator Superfamily LQS91_01130 PF03989 DNA gyrase C-terminal domain, beta-propeller LQS91_01130 PF00521 DNA gyrase/topoisomerase IV, subunit A LQS91_01135 PF13193 AMP-binding enzyme C-terminal domain LQS91_01135 PF00501 AMP-binding enzyme LQS91_01150 PF00719 Inorganic pyrophosphatase LQS91_01155 PF03573 outer membrane porin, OprD family LQS91_01170 PF00701 Dihydrodipicolinate synthetase family LQS91_01175 PF13610 DDE domain LQS91_01190 PF01636 Phosphotransferase enzyme family LQS91_01195 PF13610 DDE domain LQS91_01200 PF00563 EAL domain LQS91_01200 PF11809 Domain of unknown function (DUF3330) LQS91_01205 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01205 PF00589 Phage integrase family LQS91_01210 PF00583 Acetyltransferase (GNAT) family LQS91_01225 PF00893 Small Multidrug Resistance protein LQS91_01230 PF00809 Pterin binding enzyme LQS91_01265 PF03743 Bacterial conjugation TrbI-like protein LQS91_01270 PF13411 MerR HTH family regulatory protein LQS91_01280 PF01252 Signal peptidase (SPase) II LQS91_01300 PF13610 DDE domain LQS91_01315 PF01636 Phosphotransferase enzyme family LQS91_01320 PF13610 DDE domain LQS91_01325 PF11809 Domain of unknown function (DUF3330) LQS91_01325 PF00563 EAL domain LQS91_01330 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01330 PF00589 Phage integrase family LQS91_01335 PF00583 Acetyltransferase (GNAT) family LQS91_01350 PF00893 Small Multidrug Resistance protein LQS91_01355 PF00809 Pterin binding enzyme LQS91_01390 PF03743 Bacterial conjugation TrbI-like protein LQS91_01395 PF13411 MerR HTH family regulatory protein LQS91_01405 PF01252 Signal peptidase (SPase) II LQS91_01425 PF13610 DDE domain LQS91_01440 PF01636 Phosphotransferase enzyme family LQS91_01445 PF13610 DDE domain LQS91_01450 PF00563 EAL domain LQS91_01450 PF11809 Domain of unknown function (DUF3330) LQS91_01455 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01455 PF00589 Phage integrase family LQS91_01460 PF00583 Acetyltransferase (GNAT) family LQS91_01475 PF00893 Small Multidrug Resistance protein LQS91_01480 PF00809 Pterin binding enzyme LQS91_01515 PF03743 Bacterial conjugation TrbI-like protein LQS91_01520 PF13411 MerR HTH family regulatory protein LQS91_01530 PF01252 Signal peptidase (SPase) II LQS91_01550 PF13610 DDE domain LQS91_01565 PF01636 Phosphotransferase enzyme family LQS91_01570 PF13610 DDE domain LQS91_01575 PF00563 EAL domain LQS91_01575 PF11809 Domain of unknown function (DUF3330) LQS91_01580 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01580 PF00589 Phage integrase family LQS91_01585 PF00583 Acetyltransferase (GNAT) family LQS91_01600 PF00893 Small Multidrug Resistance protein LQS91_01605 PF00809 Pterin binding enzyme LQS91_01640 PF03743 Bacterial conjugation TrbI-like protein LQS91_01645 PF13411 MerR HTH family regulatory protein LQS91_01655 PF01252 Signal peptidase (SPase) II LQS91_01675 PF13610 DDE domain LQS91_01690 PF01636 Phosphotransferase enzyme family LQS91_01695 PF13610 DDE domain LQS91_01700 PF00563 EAL domain LQS91_01700 PF11809 Domain of unknown function (DUF3330) LQS91_01705 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01705 PF00589 Phage integrase family LQS91_01710 PF00583 Acetyltransferase (GNAT) family LQS91_01725 PF00893 Small Multidrug Resistance protein LQS91_01730 PF00809 Pterin binding enzyme LQS91_01765 PF03743 Bacterial conjugation TrbI-like protein LQS91_01770 PF13411 MerR HTH family regulatory protein LQS91_01780 PF01252 Signal peptidase (SPase) II LQS91_01800 PF13610 DDE domain LQS91_01815 PF01636 Phosphotransferase enzyme family LQS91_01820 PF13610 DDE domain LQS91_01825 PF00563 EAL domain LQS91_01825 PF11809 Domain of unknown function (DUF3330) LQS91_01830 PF00589 Phage integrase family LQS91_01830 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01835 PF00583 Acetyltransferase (GNAT) family LQS91_01850 PF00893 Small Multidrug Resistance protein LQS91_01855 PF00809 Pterin binding enzyme LQS91_01890 PF03743 Bacterial conjugation TrbI-like protein LQS91_01895 PF13411 MerR HTH family regulatory protein LQS91_01905 PF01252 Signal peptidase (SPase) II LQS91_01925 PF13610 DDE domain LQS91_01940 PF01636 Phosphotransferase enzyme family LQS91_01945 PF13610 DDE domain LQS91_01950 PF11809 Domain of unknown function (DUF3330) LQS91_01950 PF00563 EAL domain LQS91_01955 PF00589 Phage integrase family LQS91_01955 PF13495 Phage integrase, N-terminal SAM-like domain LQS91_01960 PF00583 Acetyltransferase (GNAT) family LQS91_01975 PF00893 Small Multidrug Resistance protein LQS91_01980 PF00809 Pterin binding enzyme LQS91_02015 PF03743 Bacterial conjugation TrbI-like protein LQS91_02020 PF13411 MerR HTH family regulatory protein LQS91_02030 PF01252 Signal peptidase (SPase) II LQS91_02050 PF13610 DDE domain LQS91_02080 PF00543 Nitrogen regulatory protein P-II LQS91_02085 PF00909 Ammonium Transporter Family LQS91_02090 PF03477 ATP cone domain LQS91_02095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQS91_02095 PF01872 RibD C-terminal domain LQS91_02105 PF00677 Lumazine binding domain LQS91_02125 PF00883 Cytosol aminopeptidase family, catalytic domain LQS91_02125 PF02789 Cytosol aminopeptidase family, N-terminal domain LQS91_02135 PF03739 Lipopolysaccharide export system permease LptF/LptG LQS91_02140 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LQS91_02140 PF01676 Metalloenzyme superfamily LQS91_02145 PF00595 PDZ domain LQS91_02145 PF03572 Peptidase family S41 LQS91_02150 PF02954 Bacterial regulatory protein, Fis family LQS91_02150 PF00072 Response regulator receiver domain LQS91_02150 PF00158 Sigma-54 interaction domain LQS91_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_02155 PF00512 His Kinase A (phospho-acceptor) domain LQS91_02160 PF00196 Bacterial regulatory proteins, luxR family LQS91_02160 PF00072 Response regulator receiver domain LQS91_02165 PF00768 D-alanyl-D-alanine carboxypeptidase LQS91_02170 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_02175 PF01842 ACT domain LQS91_02175 PF03447 Homoserine dehydrogenase, NAD binding domain LQS91_02175 PF00742 Homoserine dehydrogenase LQS91_02180 PF13098 Thioredoxin-like domain LQS91_02180 PF10411 Disulfide bond isomerase protein N-terminus LQS91_02185 PF02899 Phage integrase, N-terminal SAM-like domain LQS91_02185 PF00589 Phage integrase family LQS91_02195 PF07664 Ferrous iron transport protein B C terminus LQS91_02195 PF02421 Ferrous iron transport protein B LQS91_02195 PF07670 Nucleoside recognition LQS91_02205 PF02875 Mur ligase family, glutamate ligase domain LQS91_02205 PF08245 Mur ligase middle domain LQS91_02210 PF01098 Cell cycle protein LQS91_02215 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQS91_02220 PF01258 Prokaryotic dksA/traR C4-type zinc finger LQS91_02225 PF00149 Calcineurin-like phosphoesterase LQS91_02230 PF00293 NUDIX domain LQS91_02235 PF13667 ThiC-associated domain LQS91_02235 PF01964 Radical SAM ThiC family LQS91_02250 PF00892 EamA-like transporter family LQS91_02255 PF02321 Outer membrane efflux protein LQS91_02260 PF01895 PhoU domain LQS91_02265 PF04362 Bacterial Fe(2+) trafficking LQS91_02270 PF00206 Lyase LQS91_02270 PF14698 Argininosuccinate lyase C-terminal LQS91_02275 PF06580 Histidine kinase LQS91_02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_02275 PF07694 5TMR of 5TMR-LYT LQS91_02280 PF04397 LytTr DNA-binding domain LQS91_02280 PF00072 Response regulator receiver domain LQS91_02285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LQS91_02285 PF03900 Porphobilinogen deaminase, C-terminal domain LQS91_02310 PF00816 H-NS histone family LQS91_02325 PF00263 Bacterial type II and III secretion system protein LQS91_02325 PF03958 Bacterial type II/III secretion system short domain LQS91_02330 PF12401 Protein of unknown function (DUF2662) LQS91_02330 PF00498 FHA domain LQS91_02335 PF13419 Haloacid dehalogenase-like hydrolase LQS91_02340 PF00425 chorismate binding enzyme LQS91_02340 PF04715 Anthranilate synthase component I, N terminal region LQS91_02365 PF03144 Elongation factor Tu domain 2 LQS91_02365 PF03143 Elongation factor Tu C-terminal domain LQS91_02365 PF00009 Elongation factor Tu GTP binding domain LQS91_02375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LQS91_02380 PF00467 KOW motif LQS91_02380 PF02357 Transcription termination factor nusG LQS91_02385 PF00298 Ribosomal protein L11, RNA binding domain LQS91_02385 PF03946 Ribosomal protein L11, N-terminal domain LQS91_02390 PF00687 Ribosomal protein L1p/L10e family LQS91_02395 PF00466 Ribosomal protein L10 LQS91_02400 PF00542 Ribosomal protein L7/L12 C-terminal domain LQS91_02400 PF16320 Ribosomal protein L7/L12 dimerisation domain LQS91_02405 PF04561 RNA polymerase Rpb2, domain 2 LQS91_02405 PF04563 RNA polymerase beta subunit LQS91_02405 PF04560 RNA polymerase Rpb2, domain 7 LQS91_02405 PF04565 RNA polymerase Rpb2, domain 3 LQS91_02405 PF10385 RNA polymerase beta subunit external 1 domain LQS91_02405 PF00562 RNA polymerase Rpb2, domain 6 LQS91_02410 PF04997 RNA polymerase Rpb1, domain 1 LQS91_02410 PF04998 RNA polymerase Rpb1, domain 5 LQS91_02410 PF05000 RNA polymerase Rpb1, domain 4 LQS91_02410 PF00623 RNA polymerase Rpb1, domain 2 LQS91_02410 PF04983 RNA polymerase Rpb1, domain 3 LQS91_02435 PF03553 Na+/H+ antiporter family LQS91_02435 PF13726 Na+-H+ antiporter family LQS91_02445 PF00665 Integrase core domain LQS91_02445 PF13936 Helix-turn-helix domain LQS91_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_02455 PF00183 Hsp90 protein LQS91_02470 PF01323 DSBA-like thioredoxin domain LQS91_02480 PF00376 MerR family regulatory protein LQS91_02480 PF09278 MerR, DNA binding LQS91_02495 PF02803 Thiolase, C-terminal domain LQS91_02495 PF00108 Thiolase, N-terminal domain LQS91_02500 PF00378 Enoyl-CoA hydratase/isomerase LQS91_02500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQS91_02500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQS91_02520 PF01541 GIY-YIG catalytic domain LQS91_02520 PF02151 UvrB/uvrC motif LQS91_02520 PF08459 UvrC Helix-hairpin-helix N-terminal LQS91_02530 PF01066 CDP-alcohol phosphatidyltransferase LQS91_02535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQS91_02535 PF02805 Metal binding domain of Ada LQS91_02535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQS91_02535 PF12833 Helix-turn-helix domain LQS91_02560 PF13533 Biotin-lipoyl like LQS91_02565 PF03652 Holliday junction resolvase LQS91_02570 PF02622 Uncharacterized ACR, COG1678 LQS91_02575 PF02463 RecF/RecN/SMC N terminal domain LQS91_02585 PF06865 Pyrimidine/purine nucleoside phosphorylase LQS91_02590 PF00588 SpoU rRNA Methylase family LQS91_02590 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQS91_02600 PF01121 Dephospho-CoA kinase LQS91_02605 PF06750 Bacterial Peptidase A24 N-terminal domain LQS91_02605 PF01478 Type IV leader peptidase family LQS91_02615 PF00482 Type II secretion system (T2SS), protein F LQS91_02620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQS91_02620 PF00437 Type II/IV secretion system protein LQS91_02625 PF00121 Triosephosphate isomerase LQS91_02630 PF03840 Preprotein translocase SecG subunit LQS91_02650 PF17384 RimP C-terminal SH3 domain LQS91_02650 PF02576 RimP N-terminal domain LQS91_02655 PF08529 NusA N-terminal domain LQS91_02655 PF00575 S1 RNA binding domain LQS91_02655 PF13184 NusA-like KH domain LQS91_02660 PF08364 Bacterial translation initiation factor IF-2 associated region LQS91_02660 PF04760 Translation initiation factor IF-2, N-terminal region LQS91_02660 PF00009 Elongation factor Tu GTP binding domain LQS91_02660 PF11987 Translation-initiation factor 2 LQS91_02665 PF02033 Ribosome-binding factor A LQS91_02670 PF03334 Na+/H+ antiporter subunit LQS91_02675 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LQS91_02680 PF01899 Na+/H+ ion antiporter subunit LQS91_02685 PF00361 Proton-conducting membrane transporter LQS91_02690 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQS91_02695 PF13244 Domain of unknown function (DUF4040) LQS91_02695 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LQS91_02695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQS91_02695 PF00361 Proton-conducting membrane transporter LQS91_02710 PF01502 Phosphoribosyl-AMP cyclohydrolase LQS91_02715 PF01494 FAD binding domain LQS91_02720 PF03109 ABC1 family LQS91_02730 PF01209 ubiE/COQ5 methyltransferase family LQS91_02740 PF03976 Polyphosphate kinase 2 (PPK2) LQS91_02750 PF17946 RecC C-terminal domain LQS91_02755 PF12705 PD-(D/E)XK nuclease superfamily LQS91_02755 PF00580 UvrD/REP helicase N-terminal domain LQS91_02755 PF13361 UvrD-like helicase C-terminal domain LQS91_02760 PF13538 UvrD-like helicase C-terminal domain LQS91_02765 PF00144 Beta-lactamase LQS91_02770 PF00312 Ribosomal protein S15 LQS91_02775 PF00013 KH domain LQS91_02775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LQS91_02775 PF01138 3' exoribonuclease family, domain 1 LQS91_02775 PF03725 3' exoribonuclease family, domain 2 LQS91_02775 PF00575 S1 RNA binding domain LQS91_02780 PF01544 CorA-like Mg2+ transporter protein LQS91_02790 PF00226 DnaJ domain LQS91_02790 PF01556 DnaJ C terminal domain LQS91_02800 PF01430 Hsp33 protein LQS91_02805 PF00999 Sodium/hydrogen exchanger family LQS91_02805 PF02254 TrkA-N domain LQS91_02810 PF00270 DEAD/DEAH box helicase LQS91_02810 PF00271 Helicase conserved C-terminal domain LQS91_02810 PF17764 3′ DNA-binding domain (3′BD) LQS91_02810 PF18074 Primosomal protein N C-terminal domain LQS91_02810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LQS91_02815 PF00482 Type II secretion system (T2SS), protein F LQS91_02820 PF07963 Prokaryotic N-terminal methylation motif LQS91_02820 PF08334 Type II secretion system (T2SS), protein G LQS91_02830 PF01588 Putative tRNA binding domain LQS91_02835 PF00795 Carbon-nitrogen hydrolase LQS91_02840 PF03471 Transporter associated domain LQS91_02840 PF00571 CBS domain LQS91_02845 PF01206 Sulfurtransferase TusA LQS91_02865 PF01177 Asp/Glu/Hydantoin racemase LQS91_02875 PF00762 Ferrochelatase LQS91_02880 PF00753 Metallo-beta-lactamase superfamily LQS91_02885 PF03884 DNA gyrase inhibitor YacG LQS91_02895 PF13247 4Fe-4S dicluster domain LQS91_02895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQS91_02895 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_02905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LQS91_02915 PF01197 Ribosomal protein L31 LQS91_02920 PF03109 ABC1 family LQS91_02925 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LQS91_02925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_02930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_02930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LQS91_02930 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_02935 PF01554 MatE LQS91_02945 PF04055 Radical SAM superfamily LQS91_02945 PF06969 HemN C-terminal domain LQS91_02950 PF00106 short chain dehydrogenase LQS91_02955 PF03466 LysR substrate binding domain LQS91_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_02970 PF00501 AMP-binding enzyme LQS91_02970 PF13193 AMP-binding enzyme C-terminal domain LQS91_02975 PF12111 Polyribonucleotide phosphorylase C terminal LQS91_02975 PF10150 Ribonuclease E/G family LQS91_02975 PF00575 S1 RNA binding domain LQS91_02985 PF00849 RNA pseudouridylate synthase LQS91_02985 PF01479 S4 domain LQS91_02990 PF13419 Haloacid dehalogenase-like hydrolase LQS91_02995 PF08279 HTH domain LQS91_02995 PF13280 WYL domain LQS91_03000 PF02798 Glutathione S-transferase, N-terminal domain LQS91_03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_03010 PF03466 LysR substrate binding domain LQS91_03015 PF12706 Beta-lactamase superfamily domain LQS91_03020 PF00141 Peroxidase LQS91_03025 PF01590 GAF domain LQS91_03025 PF05524 PEP-utilising enzyme, N-terminal LQS91_03025 PF00391 PEP-utilising enzyme, mobile domain LQS91_03025 PF02896 PEP-utilising enzyme, TIM barrel domain LQS91_03030 PF00293 NUDIX domain LQS91_03040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_03040 PF03466 LysR substrate binding domain LQS91_03050 PF00330 Aconitase family (aconitate hydratase) LQS91_03055 PF00694 Aconitase C-terminal domain LQS91_03065 PF00180 Isocitrate/isopropylmalate dehydrogenase LQS91_03080 PF01176 Translation initiation factor 1A / IF-1 LQS91_03090 PF01416 tRNA pseudouridine synthase LQS91_03110 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQS91_03110 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQS91_03120 PF00375 Sodium:dicarboxylate symporter family LQS91_03130 PF03279 Bacterial lipid A biosynthesis acyltransferase LQS91_03135 PF01810 LysE type translocator LQS91_03140 PF00005 ABC transporter LQS91_03140 PF16326 ABC transporter C-terminal domain LQS91_03140 PF12848 ABC transporter LQS91_03145 PF04102 SlyX LQS91_03150 PF00107 Zinc-binding dehydrogenase LQS91_03150 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_03155 PF01638 HxlR-like helix-turn-helix LQS91_03165 PF01751 Toprim domain LQS91_03165 PF01396 Topoisomerase DNA binding C4 zinc finger LQS91_03165 PF01131 DNA topoisomerase LQS91_03165 PF08272 Topoisomerase I zinc-ribbon-like LQS91_03180 PF13361 UvrD-like helicase C-terminal domain LQS91_03180 PF00580 UvrD/REP helicase N-terminal domain LQS91_03185 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LQS91_03205 PF02254 TrkA-N domain LQS91_03205 PF00999 Sodium/hydrogen exchanger family LQS91_03210 PF00471 Ribosomal protein L33 LQS91_03215 PF00830 Ribosomal L28 family LQS91_03220 PF00171 Aldehyde dehydrogenase family LQS91_03230 PF00551 Formyl transferase LQS91_03230 PF01842 ACT domain LQS91_03240 PF01618 MotA/TolQ/ExbB proton channel family LQS91_03250 PF01625 Peptide methionine sulfoxide reductase LQS91_03260 PF00186 Dihydrofolate reductase LQS91_03265 PF00303 Thymidylate synthase LQS91_03280 PF01790 Prolipoprotein diacylglyceryl transferase LQS91_03300 PF00902 Sec-independent protein translocase protein (TatC) LQS91_03305 PF02416 mttA/Hcf106 family LQS91_03310 PF02416 mttA/Hcf106 family LQS91_03320 PF01725 Ham1 family LQS91_03330 PF07021 Methionine biosynthesis protein MetW LQS91_03330 PF00561 alpha/beta hydrolase fold LQS91_03335 PF00561 alpha/beta hydrolase fold LQS91_03340 PF08502 LeuA allosteric (dimerisation) domain LQS91_03340 PF00682 HMGL-like LQS91_03345 PF18331 PKHD-type hydroxylase C-terminal domain LQS91_03345 PF13640 2OG-Fe(II) oxygenase superfamily LQS91_03350 PF07715 TonB-dependent Receptor Plug Domain LQS91_03350 PF00593 TonB dependent receptor LQS91_03355 PF05697 Bacterial trigger factor protein (TF) LQS91_03355 PF05698 Bacterial trigger factor protein (TF) C-terminus LQS91_03355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQS91_03360 PF00574 Clp protease LQS91_03365 PF07724 AAA domain (Cdc48 subfamily) LQS91_03365 PF10431 C-terminal, D2-small domain, of ClpB protein LQS91_03365 PF06689 ClpX C4-type zinc finger LQS91_03380 PF05681 Fumarate hydratase (Fumerase) LQS91_03380 PF05683 Fumarase C-terminus LQS91_03385 PF07085 DRTGG domain LQS91_03385 PF01515 Phosphate acetyl/butaryl transferase LQS91_03390 PF00871 Acetokinase family LQS91_03395 PF00920 Dehydratase family LQS91_03400 PF01081 KDPG and KHG aldolase LQS91_03405 PF02447 GntP family permease LQS91_03410 PF01202 Shikimate kinase LQS91_03415 PF00171 Aldehyde dehydrogenase family LQS91_03420 PF00171 Aldehyde dehydrogenase family LQS91_03425 PF00561 alpha/beta hydrolase fold LQS91_03435 PF00933 Glycosyl hydrolase family 3 N terminal domain LQS91_03440 PF00595 PDZ domain LQS91_03440 PF11818 C-terminal domain of tail specific protease (DUF3340) LQS91_03440 PF17804 Tail specific protease N-terminal domain LQS91_03440 PF03572 Peptidase family S41 LQS91_03445 PF13439 Glycosyltransferase Family 4 LQS91_03445 PF00534 Glycosyl transferases group 1 LQS91_03450 PF01569 PAP2 superfamily LQS91_03455 PF04384 Iron-sulphur cluster assembly LQS91_03460 PF00334 Nucleoside diphosphate kinase LQS91_03465 PF04055 Radical SAM superfamily LQS91_03475 PF13464 Domain of unknown function (DUF4115) LQS91_03480 PF04551 GcpE protein LQS91_03485 PF03129 Anticodon binding domain LQS91_03485 PF13393 Histidyl-tRNA synthetase LQS91_03495 PF13360 PQQ-like domain LQS91_03500 PF01926 50S ribosome-binding GTPase LQS91_03500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LQS91_03510 PF02556 Preprotein translocase subunit SecB LQS91_03515 PF00462 Glutaredoxin LQS91_03525 PF03193 RsgA GTPase LQS91_03530 PF00929 Exonuclease LQS91_03545 PF02321 Outer membrane efflux protein LQS91_03550 PF00005 ABC transporter LQS91_03550 PF02687 FtsX-like permease family LQS91_03550 PF12704 MacB-like periplasmic core domain LQS91_03555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQS91_03570 PF13603 Leucyl-tRNA synthetase, Domain 2 LQS91_03570 PF00133 tRNA synthetases class I (I, L, M and V) LQS91_03570 PF08264 Anticodon-binding domain of tRNA LQS91_03570 PF09334 tRNA synthetases class I (M) LQS91_03580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQS91_03580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQS91_03580 PF00205 Thiamine pyrophosphate enzyme, central domain LQS91_03585 PF10369 Small subunit of acetolactate synthase LQS91_03590 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LQS91_03590 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LQS91_03595 PF00563 EAL domain LQS91_03595 PF00990 Diguanylate cyclase, GGDEF domain LQS91_03595 PF03707 Bacterial signalling protein N terminal repeat LQS91_03620 PF00009 Elongation factor Tu GTP binding domain LQS91_03620 PF03144 Elongation factor Tu domain 2 LQS91_03620 PF16658 Class II release factor RF3, C-terminal domain LQS91_03635 PF01026 TatD related DNase LQS91_03640 PF00694 Aconitase C-terminal domain LQS91_03640 PF00330 Aconitase family (aconitate hydratase) LQS91_03645 PF00899 ThiF family LQS91_03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_03655 PF03466 LysR substrate binding domain LQS91_03665 PF01207 Dihydrouridine synthase (Dus) LQS91_03670 PF00589 Phage integrase family LQS91_03750 PF04945 YHS domain LQS91_03755 PF00672 HAMP domain LQS91_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_03755 PF00512 His Kinase A (phospho-acceptor) domain LQS91_03760 PF00486 Transcriptional regulatory protein, C terminal LQS91_03760 PF00072 Response regulator receiver domain LQS91_03775 PF00394 Multicopper oxidase LQS91_03775 PF07731 Multicopper oxidase LQS91_03775 PF07732 Multicopper oxidase LQS91_03795 PF07690 Major Facilitator Superfamily LQS91_03805 PF00892 EamA-like transporter family LQS91_03810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LQS91_03810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LQS91_03815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LQS91_03820 PF02233 NAD(P) transhydrogenase beta subunit LQS91_03825 PF00106 short chain dehydrogenase LQS91_03835 PF01261 Xylose isomerase-like TIM barrel LQS91_03840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQS91_03840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQS91_03845 PF00378 Enoyl-CoA hydratase/isomerase LQS91_03850 PF00672 HAMP domain LQS91_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_03850 PF00512 His Kinase A (phospho-acceptor) domain LQS91_03850 PF01627 Hpt domain LQS91_03850 PF00072 Response regulator receiver domain LQS91_03850 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LQS91_03855 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_03865 PF05958 tRNA (Uracil-5-)-methyltransferase LQS91_03870 PF13291 ACT domain LQS91_03870 PF04607 Region found in RelA / SpoT proteins LQS91_03870 PF02824 TGS domain LQS91_03880 PF03819 MazG nucleotide pyrophosphohydrolase domain LQS91_03890 PF01743 Poly A polymerase head domain LQS91_03890 PF12626 Polymerase A arginine-rich C-terminus LQS91_03890 PF12627 Probable RNA and SrmB- binding site of polymerase A LQS91_03895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LQS91_03900 PF02548 Ketopantoate hydroxymethyltransferase LQS91_03905 PF02569 Pantoate-beta-alanine ligase LQS91_03910 PF03668 P-loop ATPase protein family LQS91_03915 PF00381 PTS HPr component phosphorylation site LQS91_03920 PF04751 Protein of unknown function (DUF615) LQS91_03925 PF00501 AMP-binding enzyme LQS91_03925 PF13193 AMP-binding enzyme C-terminal domain LQS91_03930 PF03129 Anticodon binding domain LQS91_03930 PF02824 TGS domain LQS91_03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQS91_03930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQS91_03935 PF05198 Translation initiation factor IF-3, N-terminal domain LQS91_03935 PF00707 Translation initiation factor IF-3, C-terminal domain LQS91_03940 PF00043 Glutathione S-transferase, C-terminal domain LQS91_03940 PF02798 Glutathione S-transferase, N-terminal domain LQS91_03945 PF09335 SNARE associated Golgi protein LQS91_03950 PF07690 Major Facilitator Superfamily LQS91_03960 PF01632 Ribosomal protein L35 LQS91_03965 PF00453 Ribosomal protein L20 LQS91_03980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LQS91_03980 PF01409 tRNA synthetases class II core domain (F) LQS91_03985 PF03483 B3/4 domain LQS91_03985 PF03484 tRNA synthetase B5 domain LQS91_03985 PF03147 Ferredoxin-fold anticodon binding domain LQS91_03985 PF01588 Putative tRNA binding domain LQS91_03985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LQS91_03990 PF00216 Bacterial DNA-binding protein LQS91_04005 PF07497 Rho termination factor, RNA-binding domain LQS91_04005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LQS91_04005 PF07498 Rho termination factor, N-terminal domain LQS91_04010 PF00085 Thioredoxin LQS91_04015 PF02541 Ppx/GppA phosphatase family LQS91_04020 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LQS91_04025 PF01171 PP-loop family LQS91_04025 PF09179 TilS substrate binding domain LQS91_04025 PF11734 TilS substrate C-terminal domain LQS91_04030 PF03807 NADP oxidoreductase coenzyme F420-dependent LQS91_04030 PF14748 Pyrroline-5-carboxylate reductase dimerisation LQS91_04035 PF02325 YGGT family LQS91_04040 PF01367 5'-3' exonuclease, C-terminal SAM fold LQS91_04040 PF00476 DNA polymerase family A LQS91_04040 PF01612 3'-5' exonuclease LQS91_04040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LQS91_04060 PF00437 Type II/IV secretion system protein LQS91_04065 PF02566 OsmC-like protein LQS91_04070 PF01047 MarR family LQS91_04080 PF00795 Carbon-nitrogen hydrolase LQS91_04125 PF04552 Sigma-54, DNA binding domain LQS91_04125 PF04963 Sigma-54 factor, core binding domain LQS91_04125 PF00309 Sigma-54 factor, Activator interacting domain (AID) LQS91_04130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LQS91_04135 PF01722 BolA-like protein LQS91_04140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQS91_04145 PF01634 ATP phosphoribosyltransferase LQS91_04150 PF00815 Histidinol dehydrogenase LQS91_04155 PF00155 Aminotransferase class I and II LQS91_04160 PF04715 Anthranilate synthase component I, N terminal region LQS91_04160 PF00425 chorismate binding enzyme LQS91_04200 PF00293 NUDIX domain LQS91_04205 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_04210 PF00814 Glycoprotease family LQS91_04215 PF04445 Putative SAM-dependent methyltransferase LQS91_04225 PF00756 Putative esterase LQS91_04235 PF00834 Ribulose-phosphate 3 epimerase family LQS91_04250 PF07731 Multicopper oxidase LQS91_04250 PF00394 Multicopper oxidase LQS91_04250 PF07732 Multicopper oxidase LQS91_04255 PF05275 Copper resistance protein B precursor (CopB) LQS91_04265 PF00893 Small Multidrug Resistance protein LQS91_04270 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LQS91_04270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQS91_04275 PF01960 ArgJ family LQS91_04280 PF02445 Quinolinate synthetase A protein LQS91_04305 PF00962 Adenosine/AMP deaminase LQS91_04310 PF00107 Zinc-binding dehydrogenase LQS91_04310 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_04315 PF03466 LysR substrate binding domain LQS91_04320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_04320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_04320 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_04325 PF07690 Major Facilitator Superfamily LQS91_04330 PF02515 CoA-transferase family III LQS91_04340 PF14537 Cytochrome c3 LQS91_04340 PF00890 FAD binding domain LQS91_04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_04345 PF03466 LysR substrate binding domain LQS91_04355 PF07690 Major Facilitator Superfamily LQS91_04360 PF03466 LysR substrate binding domain LQS91_04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_04370 PF01546 Peptidase family M20/M25/M40 LQS91_04370 PF07687 Peptidase dimerisation domain LQS91_04375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQS91_04375 PF12833 Helix-turn-helix domain LQS91_04385 PF01810 LysE type translocator LQS91_04390 PF03466 LysR substrate binding domain LQS91_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_04400 PF08267 Cobalamin-independent synthase, N-terminal domain LQS91_04400 PF01717 Cobalamin-independent synthase, Catalytic domain LQS91_04405 PF01613 Flavin reductase like domain LQS91_04410 PF16295 Tetracyclin repressor-like, C-terminal domain LQS91_04410 PF00440 Bacterial regulatory proteins, tetR family LQS91_04440 PF02567 Phenazine biosynthesis-like protein LQS91_04450 PF00268 Ribonucleotide reductase, small chain LQS91_04460 PF00317 Ribonucleotide reductase, all-alpha domain LQS91_04460 PF02867 Ribonucleotide reductase, barrel domain LQS91_04460 PF03477 ATP cone domain LQS91_04470 PF00072 Response regulator receiver domain LQS91_04470 PF00486 Transcriptional regulatory protein, C terminal LQS91_04475 PF00672 HAMP domain LQS91_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_04475 PF00512 His Kinase A (phospho-acceptor) domain LQS91_04485 PF17151 Periplasmic sensor domain LQS91_04485 PF00990 Diguanylate cyclase, GGDEF domain LQS91_04490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LQS91_04495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LQS91_04500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LQS91_04500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LQS91_04510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LQS91_04510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LQS91_04510 PF10531 SLBB domain LQS91_04515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQS91_04515 PF00384 Molybdopterin oxidoreductase LQS91_04515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LQS91_04520 PF00146 NADH dehydrogenase LQS91_04525 PF12838 4Fe-4S dicluster domain LQS91_04530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LQS91_04535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LQS91_04540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LQS91_04540 PF00361 Proton-conducting membrane transporter LQS91_04545 PF00361 Proton-conducting membrane transporter LQS91_04550 PF00361 Proton-conducting membrane transporter LQS91_04560 PF00313 'Cold-shock' DNA-binding domain LQS91_04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_04570 PF03466 LysR substrate binding domain LQS91_04575 PF00970 Oxidoreductase FAD-binding domain LQS91_04575 PF00175 Oxidoreductase NAD-binding domain LQS91_04590 PF05552 Conserved TM helix LQS91_04605 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_04610 PF13533 Biotin-lipoyl like LQS91_04635 PF09334 tRNA synthetases class I (M) LQS91_04635 PF01588 Putative tRNA binding domain LQS91_04645 PF10609 NUBPL iron-transfer P-loop NTPase LQS91_04650 PF01048 Phosphorylase superfamily LQS91_04665 PF00692 dUTPase LQS91_04695 PF01207 Dihydrouridine synthase (Dus) LQS91_04705 PF02881 SRP54-type protein, helical bundle domain LQS91_04705 PF02978 Signal peptide binding domain LQS91_04705 PF00448 SRP54-type protein, GTPase domain LQS91_04710 PF03309 Type III pantothenate kinase LQS91_04720 PF01925 Sulfite exporter TauE/SafE LQS91_04730 PF02463 RecF/RecN/SMC N terminal domain LQS91_04730 PF06470 SMC proteins Flexible Hinge Domain LQS91_04740 PF12826 Helix-hairpin-helix motif LQS91_04740 PF00533 BRCA1 C Terminus (BRCT) domain LQS91_04740 PF01653 NAD-dependent DNA ligase adenylation domain LQS91_04740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LQS91_04740 PF03120 NAD-dependent DNA ligase OB-fold domain LQS91_04745 PF00210 Ferritin-like domain LQS91_04750 PF07690 Major Facilitator Superfamily LQS91_04755 PF00982 Glycosyltransferase family 20 LQS91_04760 PF02358 Trehalose-phosphatase LQS91_04765 PF12697 Alpha/beta hydrolase family LQS91_04765 PF08241 Methyltransferase domain LQS91_04770 PF00202 Aminotransferase class-III LQS91_04770 PF06968 Biotin and Thiamin Synthesis associated domain LQS91_04770 PF04055 Radical SAM superfamily LQS91_04775 PF00155 Aminotransferase class I and II LQS91_04790 PF00849 RNA pseudouridylate synthase LQS91_04790 PF01479 S4 domain LQS91_04795 PF04079 Segregation and condensation complex subunit ScpB LQS91_04800 PF02616 Segregation and condensation protein ScpA LQS91_04805 PF01300 Telomere recombination LQS91_04810 PF04315 Elongation factor P hydroxylase LQS91_04815 PF02620 Large ribosomal RNA subunit accumulation protein YceD LQS91_04820 PF01783 Ribosomal L32p protein family LQS91_04825 PF00698 Acyl transferase domain LQS91_04835 PF00550 Phosphopantetheine attachment site LQS91_04840 PF01476 LysM domain LQS91_04840 PF04972 BON domain LQS91_04845 PF08543 Phosphomethylpyrimidine kinase LQS91_04845 PF02581 Thiamine monophosphate synthase LQS91_04845 PF03070 TENA/THI-4/PQQC family LQS91_04855 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQS91_04870 PF02261 Aspartate decarboxylase LQS91_04875 PF01195 Peptidyl-tRNA hydrolase LQS91_04880 PF01386 Ribosomal L25p family LQS91_04885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQS91_04885 PF14572 Phosphoribosyl synthetase-associated domain LQS91_04910 PF08544 GHMP kinases C terminal LQS91_04910 PF00288 GHMP kinases N terminal domain LQS91_04915 PF03550 Outer membrane lipoprotein LolB LQS91_04925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LQS91_04925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LQS91_04925 PF01488 Shikimate / quinate 5-dehydrogenase LQS91_04930 PF01807 CHC2 zinc finger LQS91_04930 PF08275 DNA primase catalytic core, N-terminal domain LQS91_04930 PF08278 DNA primase DnaG DnaB-binding LQS91_04930 PF10410 DnaB-helicase binding domain of primase LQS91_04935 PF13525 Outer membrane lipoprotein LQS91_04940 PF00849 RNA pseudouridylate synthase LQS91_04940 PF01479 S4 domain LQS91_04945 PF02578 Multi-copper polyphenol oxidoreductase laccase LQS91_04950 PF03358 NADPH-dependent FMN reductase LQS91_04955 PF01668 SmpB protein LQS91_04960 PF01467 Cytidylyltransferase-like LQS91_04965 PF00037 4Fe-4S binding domain LQS91_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_04985 PF03466 LysR substrate binding domain LQS91_04990 PF00180 Isocitrate/isopropylmalate dehydrogenase LQS91_04995 PF02028 BCCT, betaine/carnitine/choline family transporter LQS91_05000 PF07859 alpha/beta hydrolase fold LQS91_05005 PF00355 Rieske [2Fe-2S] domain LQS91_05005 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LQS91_05010 PF00171 Aldehyde dehydrogenase family LQS91_05015 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_05015 PF00175 Oxidoreductase NAD-binding domain LQS91_05015 PF00970 Oxidoreductase FAD-binding domain LQS91_05030 PF00795 Carbon-nitrogen hydrolase LQS91_05030 PF02540 NAD synthase LQS91_05040 PF02678 Pirin LQS91_05040 PF05726 Pirin C-terminal cupin domain LQS91_05045 PF03653 Uncharacterised protein family (UPF0093) LQS91_05050 PF00109 Beta-ketoacyl synthase, N-terminal domain LQS91_05050 PF02801 Beta-ketoacyl synthase, C-terminal domain LQS91_05060 PF00164 Ribosomal protein S12/S23 LQS91_05065 PF00177 Ribosomal protein S7p/S5e LQS91_05070 PF00009 Elongation factor Tu GTP binding domain LQS91_05070 PF00679 Elongation factor G C-terminus LQS91_05070 PF14492 Elongation Factor G, domain II LQS91_05070 PF03764 Elongation factor G, domain IV LQS91_05070 PF03144 Elongation factor Tu domain 2 LQS91_05075 PF03143 Elongation factor Tu C-terminal domain LQS91_05075 PF03144 Elongation factor Tu domain 2 LQS91_05075 PF00009 Elongation factor Tu GTP binding domain LQS91_05090 PF00583 Acetyltransferase (GNAT) family LQS91_05095 PF04376 Arginine-tRNA-protein transferase, N terminus LQS91_05095 PF04377 Arginine-tRNA-protein transferase, C terminus LQS91_05100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LQS91_05105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_05110 PF01580 FtsK/SpoIIIE family LQS91_05110 PF09397 Ftsk gamma domain LQS91_05110 PF17854 FtsK alpha domain LQS91_05110 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LQS91_05115 PF01810 LysE type translocator LQS91_05125 PF03776 Septum formation topological specificity factor MinE LQS91_05130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LQS91_05135 PF03775 Septum formation inhibitor MinC, C-terminal domain LQS91_05145 PF01553 Acyltransferase LQS91_05150 PF00691 OmpA family LQS91_05150 PF13488 Glycine zipper LQS91_05155 PF00580 UvrD/REP helicase N-terminal domain LQS91_05155 PF13361 UvrD-like helicase C-terminal domain LQS91_05160 PF00692 dUTPase LQS91_05165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQS91_05165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQS91_05165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQS91_05165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQS91_05170 PF00696 Amino acid kinase family LQS91_05180 PF13230 Glutamine amidotransferases class-II LQS91_05185 PF01814 Hemerythrin HHE cation binding domain LQS91_05195 PF03658 RnfH family Ubiquitin LQS91_05200 PF04355 SmpA / OmlA family LQS91_05205 PF01475 Ferric uptake regulator family LQS91_05210 PF00437 Type II/IV secretion system protein LQS91_05215 PF00437 Type II/IV secretion system protein LQS91_05220 PF01168 Alanine racemase, N-terminal domain LQS91_05230 PF12320 Type 5 capsule protein repressor C-terminal domain LQS91_05230 PF00149 Calcineurin-like phosphoesterase LQS91_05250 PF01370 NAD dependent epimerase/dehydratase family LQS91_05250 PF08338 Domain of unknown function (DUF1731) LQS91_05255 PF01266 FAD dependent oxidoreductase LQS91_05260 PF00490 Delta-aminolevulinic acid dehydratase LQS91_05265 PF03061 Thioesterase superfamily LQS91_05270 PF13533 Biotin-lipoyl like LQS91_05275 PF07690 Major Facilitator Superfamily LQS91_05295 PF00665 Integrase core domain LQS91_05325 PF00582 Universal stress protein family LQS91_05330 PF01740 STAS domain LQS91_05330 PF00916 Sulfate permease family LQS91_05355 PF00905 Penicillin binding protein transpeptidase domain LQS91_05375 PF07693 KAP family P-loop domain LQS91_05390 PF01026 TatD related DNase LQS91_05410 PF00083 Sugar (and other) transporter LQS91_05415 PF00701 Dihydrodipicolinate synthetase family LQS91_05425 PF08281 Sigma-70, region 4 LQS91_05425 PF04542 Sigma-70 region 2 LQS91_05435 PF00593 TonB dependent receptor LQS91_05435 PF07715 TonB-dependent Receptor Plug Domain LQS91_05445 PF04575 Protein of unknown function (DUF560) LQS91_05455 PF01126 Heme oxygenase LQS91_05480 PF13520 Amino acid permease LQS91_05485 PF02574 Homocysteine S-methyltransferase LQS91_05495 PF06039 Malate:quinone oxidoreductase (Mqo) LQS91_05500 PF00732 GMC oxidoreductase LQS91_05500 PF05199 GMC oxidoreductase LQS91_05505 PF00171 Aldehyde dehydrogenase family LQS91_05510 PF00440 Bacterial regulatory proteins, tetR family LQS91_05510 PF13977 BetI-type transcriptional repressor, C-terminal LQS91_05515 PF02028 BCCT, betaine/carnitine/choline family transporter LQS91_05520 PF02028 BCCT, betaine/carnitine/choline family transporter LQS91_05530 PF03061 Thioesterase superfamily LQS91_05540 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQS91_05540 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQS91_05545 PF00375 Sodium:dicarboxylate symporter family LQS91_05550 PF07152 YaeQ protein LQS91_05555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQS91_05560 PF14883 Hypothetical glycosyl hydrolase family 13 LQS91_05560 PF01522 Polysaccharide deacetylase LQS91_05565 PF00535 Glycosyl transferase family 2 LQS91_05575 PF00378 Enoyl-CoA hydratase/isomerase LQS91_05590 PF09339 IclR helix-turn-helix domain LQS91_05590 PF01614 Bacterial transcriptional regulator LQS91_05595 PF00355 Rieske [2Fe-2S] domain LQS91_05605 PF00355 Rieske [2Fe-2S] domain LQS91_05615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQS91_05620 PF14759 Reductase C-terminal LQS91_05620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_05625 PF07690 Major Facilitator Superfamily LQS91_05635 PF12697 Alpha/beta hydrolase family LQS91_05645 PF03447 Homoserine dehydrogenase, NAD binding domain LQS91_05645 PF01958 Domain of unknown function DUF108 LQS91_05650 PF00171 Aldehyde dehydrogenase family LQS91_05655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQS91_05655 PF00205 Thiamine pyrophosphate enzyme, central domain LQS91_05655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQS91_05665 PF07690 Major Facilitator Superfamily LQS91_05670 PF01327 Polypeptide deformylase LQS91_05675 PF04960 Glutaminase LQS91_05680 PF02311 AraC-like ligand binding domain LQS91_05680 PF12833 Helix-turn-helix domain LQS91_05685 PF07690 Major Facilitator Superfamily LQS91_05690 PF01263 Aldose 1-epimerase LQS91_05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_05700 PF03466 LysR substrate binding domain LQS91_05710 PF07690 Major Facilitator Superfamily LQS91_05715 PF00456 Transketolase, thiamine diphosphate binding domain LQS91_05720 PF02779 Transketolase, pyrimidine binding domain LQS91_05720 PF02780 Transketolase, C-terminal domain LQS91_05725 PF02310 B12 binding domain LQS91_05725 PF02607 B12 binding domain LQS91_05725 PF02965 Vitamin B12 dependent methionine synthase, activation domain LQS91_05725 PF00809 Pterin binding enzyme LQS91_05725 PF02574 Homocysteine S-methyltransferase LQS91_05730 PF01384 Phosphate transporter family LQS91_05735 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_05750 PF03781 Sulfatase-modifying factor enzyme 1 LQS91_05755 PF00884 Sulfatase LQS91_05765 PF01106 NifU-like domain LQS91_05765 PF01521 Iron-sulphur cluster biosynthesis LQS91_05770 PF07715 TonB-dependent Receptor Plug Domain LQS91_05770 PF00593 TonB dependent receptor LQS91_05780 PF00561 alpha/beta hydrolase fold LQS91_05785 PF00484 Carbonic anhydrase LQS91_05790 PF13472 GDSL-like Lipase/Acylhydrolase family LQS91_05795 PF00005 ABC transporter LQS91_05805 PF01694 Rhomboid family LQS91_05810 PF00912 Transglycosylase LQS91_05815 PF02503 Polyphosphate kinase middle domain LQS91_05815 PF13090 Polyphosphate kinase C-terminal domain 2 LQS91_05815 PF17941 Polyphosphate kinase C-terminal domain 1 LQS91_05815 PF13089 Polyphosphate kinase N-terminal domain LQS91_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_05830 PF03466 LysR substrate binding domain LQS91_05835 PF00561 alpha/beta hydrolase fold LQS91_05840 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_05840 PF18113 Rubredoxin binding C-terminal domain LQS91_05845 PF00301 Rubredoxin LQS91_05860 PF00152 tRNA synthetases class II (D, K and N) LQS91_05860 PF01336 OB-fold nucleic acid binding domain LQS91_05865 PF14052 Capsule assembly protein Wzi LQS91_05875 PF01507 Phosphoadenosine phosphosulfate reductase family LQS91_05880 PF00009 Elongation factor Tu GTP binding domain LQS91_05895 PF03600 Citrate transporter LQS91_05900 PF00571 CBS domain LQS91_05900 PF03471 Transporter associated domain LQS91_05900 PF01595 Cyclin M transmembrane N-terminal domain LQS91_05905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_05905 PF03466 LysR substrate binding domain LQS91_05910 PF00463 Isocitrate lyase family LQS91_05925 PF01774 UreD urease accessory protein LQS91_05930 PF00547 Urease, gamma subunit LQS91_05935 PF00699 Urease beta subunit LQS91_05940 PF01979 Amidohydrolase family LQS91_05940 PF00449 Urease alpha-subunit, N-terminal domain LQS91_05945 PF05194 UreE urease accessory protein, C-terminal domain LQS91_05945 PF02814 UreE urease accessory protein, N-terminal domain LQS91_05950 PF01730 UreF LQS91_05955 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQS91_05970 PF03717 Penicillin-binding Protein dimerisation domain LQS91_05970 PF00905 Penicillin binding protein transpeptidase domain LQS91_05985 PF05191 Adenylate kinase, active site lid LQS91_05995 PF10576 Iron-sulfur binding domain of endonuclease III LQS91_05995 PF00633 Helix-hairpin-helix motif LQS91_05995 PF00730 HhH-GPD superfamily base excision DNA repair protein LQS91_06000 PF04060 Putative Fe-S cluster LQS91_06005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LQS91_06005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LQS91_06015 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LQS91_06020 PF02590 Predicted SPOUT methyltransferase LQS91_06025 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_06025 PF05362 Lon protease (S16) C-terminal proteolytic domain LQS91_06025 PF02190 ATP-dependent protease La (LON) substrate-binding domain LQS91_06035 PF01812 5-formyltetrahydrofolate cyclo-ligase family LQS91_06120 PF01381 Helix-turn-helix LQS91_06330 PF10548 P22AR C-terminal domain LQS91_06330 PF08346 AntA/AntB antirepressor LQS91_06345 PF01551 Peptidase family M23 LQS91_06345 PF01476 LysM domain LQS91_06345 PF08525 Opacity-associated protein A N-terminal motif LQS91_06400 PF00313 'Cold-shock' DNA-binding domain LQS91_06440 PF05195 Aminopeptidase P, N-terminal domain LQS91_06440 PF00557 Metallopeptidase family M24 LQS91_06445 PF01494 FAD binding domain LQS91_06450 PF01494 FAD binding domain LQS91_06460 PF13411 MerR HTH family regulatory protein LQS91_06470 PF01810 LysE type translocator LQS91_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_06475 PF03466 LysR substrate binding domain LQS91_06485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQS91_06490 PF02021 Uncharacterised protein family UPF0102 LQS91_06495 PF04972 BON domain LQS91_06505 PF00293 NUDIX domain LQS91_06505 PF09297 NADH pyrophosphatase zinc ribbon domain LQS91_06515 PF00929 Exonuclease LQS91_06520 PF01464 Transglycosylase SLT domain LQS91_06520 PF01476 LysM domain LQS91_06520 PF01464 Transglycosylase SLT domain LQS91_06520 PF01476 LysM domain LQS91_06525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LQS91_06530 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_06535 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_06535 PF12911 N-terminal TM domain of oligopeptide transport permease C LQS91_06540 PF00005 ABC transporter LQS91_06540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQS91_06545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_06585 PF07715 TonB-dependent Receptor Plug Domain LQS91_06585 PF00593 TonB dependent receptor LQS91_06595 PF00929 Exonuclease LQS91_06600 PF01979 Amidohydrolase family LQS91_06605 PF00563 EAL domain LQS91_06605 PF01590 GAF domain LQS91_06605 PF00990 Diguanylate cyclase, GGDEF domain LQS91_06605 PF00360 Phytochrome region LQS91_06610 PF00764 Arginosuccinate synthase LQS91_06615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_06615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_06625 PF00589 Phage integrase family LQS91_06625 PF13356 Arm DNA-binding domain LQS91_06695 PF05656 Protein of unknown function (DUF805) LQS91_06720 PF02661 Fic/DOC family LQS91_06730 PF02384 N-6 DNA Methylase LQS91_06735 PF01420 Type I restriction modification DNA specificity domain LQS91_06770 PF00271 Helicase conserved C-terminal domain LQS91_06770 PF00176 SNF2 family N-terminal domain LQS91_06770 PF12419 SNF2 Helicase protein LQS91_06785 PF03180 NLPA lipoprotein LQS91_06805 PF05593 RHS Repeat LQS91_06805 PF03527 RHS protein LQS91_06840 PF00324 Amino acid permease LQS91_06845 PF01266 FAD dependent oxidoreductase LQS91_06860 PF07729 FCD domain LQS91_06860 PF00392 Bacterial regulatory proteins, gntR family LQS91_06870 PF00171 Aldehyde dehydrogenase family LQS91_06880 PF00202 Aminotransferase class-III LQS91_06885 PF04958 Arginine N-succinyltransferase beta subunit LQS91_06890 PF00324 Amino acid permease LQS91_06910 PF00171 Aldehyde dehydrogenase family LQS91_06915 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQS91_06915 PF12833 Helix-turn-helix domain LQS91_06920 PF00892 EamA-like transporter family LQS91_06925 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LQS91_06925 PF08666 SAF domain LQS91_06930 PF07690 Major Facilitator Superfamily LQS91_06935 PF13378 Enolase C-terminal domain-like LQS91_06940 PF00701 Dihydrodipicolinate synthetase family LQS91_06945 PF00171 Aldehyde dehydrogenase family LQS91_06950 PF00392 Bacterial regulatory proteins, gntR family LQS91_06950 PF07729 FCD domain LQS91_06955 PF07519 Tannase and feruloyl esterase LQS91_06970 PF03573 outer membrane porin, OprD family LQS91_06975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_06975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_06975 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_06985 PF00171 Aldehyde dehydrogenase family LQS91_06990 PF00378 Enoyl-CoA hydratase/isomerase LQS91_06995 PF07690 Major Facilitator Superfamily LQS91_07010 PF00175 Oxidoreductase NAD-binding domain LQS91_07010 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_07015 PF00355 Rieske [2Fe-2S] domain LQS91_07020 PF07690 Major Facilitator Superfamily LQS91_07025 PF03573 outer membrane porin, OprD family LQS91_07030 PF05199 GMC oxidoreductase LQS91_07035 PF07859 alpha/beta hydrolase fold LQS91_07040 PF00106 short chain dehydrogenase LQS91_07045 PF00743 Flavin-binding monooxygenase-like LQS91_07050 PF12833 Helix-turn-helix domain LQS91_07050 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQS91_07055 PF04072 Leucine carboxyl methyltransferase LQS91_07060 PF00743 Flavin-binding monooxygenase-like LQS91_07065 PF00106 short chain dehydrogenase LQS91_07090 PF17954 Quercetinase C-terminal cupin domain LQS91_07090 PF02678 Pirin LQS91_07100 PF00106 short chain dehydrogenase LQS91_07100 PF00561 alpha/beta hydrolase fold LQS91_07105 PF00743 Flavin-binding monooxygenase-like LQS91_07115 PF00860 Permease family LQS91_07120 PF00962 Adenosine/AMP deaminase LQS91_07125 PF01292 Prokaryotic cytochrome b561 LQS91_07135 PF01351 Ribonuclease HII LQS91_07140 PF02599 Global regulator protein family LQS91_07145 PF00696 Amino acid kinase family LQS91_07145 PF01842 ACT domain LQS91_07145 PF13840 ACT domain LQS91_07150 PF02272 DHHA1 domain LQS91_07150 PF01411 tRNA synthetases class II (A) LQS91_07150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LQS91_07155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQS91_07155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQS91_07160 PF13393 Histidyl-tRNA synthetase LQS91_07165 PF00709 Adenylosuccinate synthetase LQS91_07180 PF00248 Aldo/keto reductase family LQS91_07185 PF00027 Cyclic nucleotide-binding domain LQS91_07185 PF13545 Crp-like helix-turn-helix domain LQS91_07195 PF02566 OsmC-like protein LQS91_07210 PF02861 Clp amino terminal domain, pathogenicity island component LQS91_07210 PF17871 AAA lid domain LQS91_07210 PF07724 AAA domain (Cdc48 subfamily) LQS91_07210 PF10431 C-terminal, D2-small domain, of ClpB protein LQS91_07210 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_07225 PF10672 S-adenosylmethionine-dependent methyltransferase LQS91_07225 PF02926 THUMP domain LQS91_07225 PF01170 Putative RNA methylase family UPF0020 LQS91_07235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQS91_07235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQS91_07240 PF01979 Amidohydrolase family LQS91_07245 PF13488 Glycine zipper LQS91_07245 PF00691 OmpA family LQS91_07255 PF00043 Glutathione S-transferase, C-terminal domain LQS91_07255 PF13417 Glutathione S-transferase, N-terminal domain LQS91_07260 PF02390 Putative methyltransferase LQS91_07270 PF02798 Glutathione S-transferase, N-terminal domain LQS91_07270 PF00043 Glutathione S-transferase, C-terminal domain LQS91_07280 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_07280 PF13192 Thioredoxin domain LQS91_07300 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQS91_07300 PF00578 AhpC/TSA family LQS91_07305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LQS91_07305 PF00271 Helicase conserved C-terminal domain LQS91_07305 PF11898 Domain of unknown function (DUF3418) LQS91_07305 PF00270 DEAD/DEAH box helicase LQS91_07305 PF04408 Helicase associated domain (HA2) LQS91_07310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LQS91_07310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LQS91_07320 PF07690 Major Facilitator Superfamily LQS91_07325 PF03594 Benzoate membrane transport protein LQS91_07330 PF00106 short chain dehydrogenase LQS91_07335 PF00970 Oxidoreductase FAD-binding domain LQS91_07335 PF00175 Oxidoreductase NAD-binding domain LQS91_07335 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_07345 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LQS91_07345 PF00355 Rieske [2Fe-2S] domain LQS91_07355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_07355 PF03466 LysR substrate binding domain LQS91_07365 PF00403 Heavy-metal-associated domain LQS91_07370 PF09278 MerR, DNA binding LQS91_07370 PF00376 MerR family regulatory protein LQS91_07405 PF02601 Exonuclease VII, large subunit LQS91_07405 PF13742 OB-fold nucleic acid binding domain LQS91_07435 PF01810 LysE type translocator LQS91_07440 PF00313 'Cold-shock' DNA-binding domain LQS91_07450 PF03807 NADP oxidoreductase coenzyme F420-dependent LQS91_07450 PF14748 Pyrroline-5-carboxylate reductase dimerisation LQS91_07475 PF07690 Major Facilitator Superfamily LQS91_07480 PF01638 HxlR-like helix-turn-helix LQS91_07550 PF06381 Protein of unknown function (DUF1073) LQS91_07570 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) LQS91_07585 PF12708 Pectate lyase superfamily protein LQS91_07585 PF13229 Right handed beta helix region LQS91_07620 PF00589 Phage integrase family LQS91_07635 PF01406 tRNA synthetases class I (C) catalytic domain LQS91_07635 PF09190 DALR domain LQS91_07640 PF00571 CBS domain LQS91_07640 PF01380 SIS domain LQS91_07655 PF03968 OstA-like protein LQS91_07660 PF00005 ABC transporter LQS91_07660 PF12399 Branched-chain amino acid ATP-binding cassette transporter LQS91_07665 PF02321 Outer membrane efflux protein LQS91_07670 PF03412 Peptidase C39 family LQS91_07670 PF00005 ABC transporter LQS91_07670 PF00664 ABC transporter transmembrane region LQS91_07680 PF01205 Uncharacterized protein family UPF0029 LQS91_07685 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_07695 PF01596 O-methyltransferase LQS91_07705 PF11953 Domain of unknown function (DUF3470) LQS91_07705 PF00037 4Fe-4S binding domain LQS91_07715 PF05190 MutS family domain IV LQS91_07715 PF05192 MutS domain III LQS91_07715 PF05188 MutS domain II LQS91_07715 PF00488 MutS domain V LQS91_07715 PF01624 MutS domain I LQS91_07720 PF01037 Lrp/AsnC ligand binding domain LQS91_07725 PF00892 EamA-like transporter family LQS91_07735 PF03279 Bacterial lipid A biosynthesis acyltransferase LQS91_07750 PF07690 Major Facilitator Superfamily LQS91_07770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQS91_07770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQS91_07795 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LQS91_07795 PF04717 Type VI secretion system, phage-baseplate injector LQS91_07795 PF13296 Putative type VI secretion system Rhs element Vgr LQS91_07800 PF05593 RHS Repeat LQS91_07800 PF03527 RHS protein LQS91_07815 PF05593 RHS Repeat LQS91_07815 PF03527 RHS protein LQS91_07835 PF03466 LysR substrate binding domain LQS91_07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_07840 PF01566 Natural resistance-associated macrophage protein LQS91_07845 PF03746 LamB/YcsF family LQS91_07850 PF07286 Protein of unknown function (DUF1445) LQS91_07860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQS91_07860 PF00364 Biotin-requiring enzyme LQS91_07860 PF02785 Biotin carboxylase C-terminal domain LQS91_07860 PF00289 Biotin carboxylase, N-terminal domain LQS91_07865 PF00654 Voltage gated chloride channel LQS91_07890 PF00440 Bacterial regulatory proteins, tetR family LQS91_07900 PF00107 Zinc-binding dehydrogenase LQS91_07900 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_07900 PF13823 Alcohol dehydrogenase GroES-associated LQS91_07915 PF00289 Biotin carboxylase, N-terminal domain LQS91_07915 PF02785 Biotin carboxylase C-terminal domain LQS91_07915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQS91_07920 PF02525 Flavodoxin-like fold LQS91_07925 PF01638 HxlR-like helix-turn-helix LQS91_07935 PF08753 NikR C terminal nickel binding domain LQS91_07935 PF01402 Ribbon-helix-helix protein, copG family LQS91_07940 PF01425 Amidase LQS91_07945 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQS91_07950 PF00005 ABC transporter LQS91_07990 PF05947 Type VI secretion system, TssF LQS91_08015 PF06744 Type VI secretion protein IcmF C-terminal LQS91_08015 PF06761 Intracellular multiplication and human macrophage-killing LQS91_08015 PF14331 ImcF-related N-terminal domain LQS91_08025 PF00691 OmpA family LQS91_08025 PF01389 OmpA-like transmembrane domain LQS91_08040 PF17871 AAA lid domain LQS91_08040 PF10431 C-terminal, D2-small domain, of ClpB protein LQS91_08040 PF07724 AAA domain (Cdc48 subfamily) LQS91_08040 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_08045 PF06812 ImpA, N-terminal, type VI secretion system LQS91_08050 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LQS91_08070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08070 PF03466 LysR substrate binding domain LQS91_08080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LQS91_08085 PF07690 Major Facilitator Superfamily LQS91_08100 PF02677 Epoxyqueuosine reductase QueH LQS91_08110 PF09278 MerR, DNA binding LQS91_08110 PF00376 MerR family regulatory protein LQS91_08120 PF00701 Dihydrodipicolinate synthetase family LQS91_08130 PF00392 Bacterial regulatory proteins, gntR family LQS91_08135 PF05544 Proline racemase LQS91_08140 PF01266 FAD dependent oxidoreductase LQS91_08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_08150 PF04324 BFD-like [2Fe-2S] binding domain LQS91_08160 PF00083 Sugar (and other) transporter LQS91_08165 PF00171 Aldehyde dehydrogenase family LQS91_08170 PF13520 Amino acid permease LQS91_08175 PF03315 Serine dehydratase beta chain LQS91_08175 PF03313 Serine dehydratase alpha chain LQS91_08180 PF00171 Aldehyde dehydrogenase family LQS91_08180 PF01575 MaoC like domain LQS91_08185 PF05138 Phenylacetic acid catabolic protein LQS91_08190 PF06243 Phenylacetic acid degradation B LQS91_08195 PF05138 Phenylacetic acid catabolic protein LQS91_08200 PF01883 Iron-sulfur cluster assembly protein LQS91_08205 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_08205 PF00970 Oxidoreductase FAD-binding domain LQS91_08205 PF00175 Oxidoreductase NAD-binding domain LQS91_08210 PF00378 Enoyl-CoA hydratase/isomerase LQS91_08215 PF00378 Enoyl-CoA hydratase/isomerase LQS91_08220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQS91_08220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQS91_08220 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LQS91_08225 PF00108 Thiolase, N-terminal domain LQS91_08225 PF02803 Thiolase, C-terminal domain LQS91_08230 PF14535 AMP-binding enzyme C-terminal domain LQS91_08230 PF00501 AMP-binding enzyme LQS91_08235 PF08223 PaaX-like protein C-terminal domain LQS91_08235 PF07848 PaaX-like protein LQS91_08240 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_08245 PF03061 Thioesterase superfamily LQS91_08250 PF02463 RecF/RecN/SMC N terminal domain LQS91_08255 PF13361 UvrD-like helicase C-terminal domain LQS91_08255 PF00580 UvrD/REP helicase N-terminal domain LQS91_08290 PF00313 'Cold-shock' DNA-binding domain LQS91_08320 PF02515 CoA-transferase family III LQS91_08325 PF00682 HMGL-like LQS91_08330 PF07690 Major Facilitator Superfamily LQS91_08335 PF00199 Catalase LQS91_08340 PF01292 Prokaryotic cytochrome b561 LQS91_08360 PF12697 Alpha/beta hydrolase family LQS91_08365 PF01613 Flavin reductase like domain LQS91_08370 PF00296 Luciferase-like monooxygenase LQS91_08375 PF00171 Aldehyde dehydrogenase family LQS91_08385 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LQS91_08395 PF00171 Aldehyde dehydrogenase family LQS91_08400 PF02627 Carboxymuconolactone decarboxylase family LQS91_08405 PF03466 LysR substrate binding domain LQS91_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08410 PF02525 Flavodoxin-like fold LQS91_08415 PF01614 Bacterial transcriptional regulator LQS91_08415 PF09339 IclR helix-turn-helix domain LQS91_08420 PF01494 FAD binding domain LQS91_08425 PF07702 UTRA domain LQS91_08425 PF00392 Bacterial regulatory proteins, gntR family LQS91_08435 PF08402 TOBE domain LQS91_08435 PF00005 ABC transporter LQS91_08440 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_08445 PF01266 FAD dependent oxidoreductase LQS91_08450 PF00266 Aminotransferase class-V LQS91_08455 PF13419 Haloacid dehalogenase-like hydrolase LQS91_08460 PF07690 Major Facilitator Superfamily LQS91_08465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_08465 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_08465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_08470 PF02515 CoA-transferase family III LQS91_08475 PF09339 IclR helix-turn-helix domain LQS91_08480 PF00378 Enoyl-CoA hydratase/isomerase LQS91_08485 PF03060 Nitronate monooxygenase LQS91_08490 PF07690 Major Facilitator Superfamily LQS91_08495 PF09339 IclR helix-turn-helix domain LQS91_08500 PF00108 Thiolase, N-terminal domain LQS91_08500 PF02803 Thiolase, C-terminal domain LQS91_08505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQS91_08505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQS91_08505 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LQS91_08515 PF00378 Enoyl-CoA hydratase/isomerase LQS91_08520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_08520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_08520 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_08525 PF07690 Major Facilitator Superfamily LQS91_08530 PF01144 Coenzyme A transferase LQS91_08535 PF01144 Coenzyme A transferase LQS91_08545 PF07690 Major Facilitator Superfamily LQS91_08555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_08555 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_08555 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQS91_08555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08570 PF03466 LysR substrate binding domain LQS91_08575 PF00682 HMGL-like LQS91_08580 PF00289 Biotin carboxylase, N-terminal domain LQS91_08580 PF00364 Biotin-requiring enzyme LQS91_08580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQS91_08580 PF18140 Propionyl-coenzyme A carboxylase BT domain LQS91_08580 PF02785 Biotin carboxylase C-terminal domain LQS91_08585 PF00378 Enoyl-CoA hydratase/isomerase LQS91_08590 PF01039 Carboxyl transferase domain LQS91_08595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_08595 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_08600 PF00440 Bacterial regulatory proteins, tetR family LQS91_08605 PF13193 AMP-binding enzyme C-terminal domain LQS91_08605 PF00501 AMP-binding enzyme LQS91_08625 PF03466 LysR substrate binding domain LQS91_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08660 PF02464 Competence-damaged protein LQS91_08660 PF00994 Probable molybdopterin binding domain LQS91_08660 PF18146 Damage-inducible protein CinA KH domain LQS91_08670 PF06628 Catalase-related immune-responsive LQS91_08670 PF18011 C-terminal domain found in long catalases LQS91_08670 PF00199 Catalase LQS91_08700 PF00717 Peptidase S24-like LQS91_08710 PF13404 AsnC-type helix-turn-helix domain LQS91_08710 PF01037 Lrp/AsnC ligand binding domain LQS91_08720 PF00072 Response regulator receiver domain LQS91_08720 PF09308 LuxQ, periplasmic LQS91_08720 PF00512 His Kinase A (phospho-acceptor) domain LQS91_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_08725 PF00072 Response regulator receiver domain LQS91_08740 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_08745 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_08750 PF00005 ABC transporter LQS91_08755 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQS91_08760 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQS91_08770 PF03466 LysR substrate binding domain LQS91_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08775 PF01810 LysE type translocator LQS91_08785 PF00266 Aminotransferase class-V LQS91_08795 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_08800 PF00581 Rhodanese-like domain LQS91_08810 PF03466 LysR substrate binding domain LQS91_08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08815 PF02798 Glutathione S-transferase, N-terminal domain LQS91_08820 PF14834 Glutathione S-transferase, C-terminal domain LQS91_08820 PF02798 Glutathione S-transferase, N-terminal domain LQS91_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08825 PF03466 LysR substrate binding domain LQS91_08830 PF03788 LrgA family LQS91_08835 PF04172 LrgB-like family LQS91_08840 PF00392 Bacterial regulatory proteins, gntR family LQS91_08855 PF07690 Major Facilitator Superfamily LQS91_08860 PF16957 Malonate decarboxylase, alpha subunit, transporter LQS91_08865 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LQS91_08870 PF06857 Malonate decarboxylase delta subunit (MdcD) LQS91_08875 PF01039 Carboxyl transferase domain LQS91_08885 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LQS91_08890 PF00698 Acyl transferase domain LQS91_08905 PF03466 LysR substrate binding domain LQS91_08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08910 PF00155 Aminotransferase class I and II LQS91_08910 PF00392 Bacterial regulatory proteins, gntR family LQS91_08920 PF02322 Cytochrome bd terminal oxidase subunit II LQS91_08925 PF01654 Cytochrome bd terminal oxidase subunit I LQS91_08940 PF00296 Luciferase-like monooxygenase LQS91_08945 PF00083 Sugar (and other) transporter LQS91_08955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LQS91_08960 PF00005 ABC transporter LQS91_08965 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_08970 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LQS91_08975 PF01177 Asp/Glu/Hydantoin racemase LQS91_08980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LQS91_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_08990 PF03466 LysR substrate binding domain LQS91_09000 PF01979 Amidohydrolase family LQS91_09000 PF13382 Adenine deaminase C-terminal domain LQS91_09010 PF03960 ArsC family LQS91_09015 PF01022 Bacterial regulatory protein, arsR family LQS91_09020 PF01758 Sodium Bile acid symporter family LQS91_09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_09025 PF03466 LysR substrate binding domain LQS91_09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_09040 PF13192 Thioredoxin domain LQS91_09055 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_09060 PF00588 SpoU rRNA Methylase family LQS91_09065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LQS91_09065 PF02811 PHP domain LQS91_09065 PF07733 Bacterial DNA polymerase III alpha NTPase domain LQS91_09065 PF01336 OB-fold nucleic acid binding domain LQS91_09065 PF14579 Helix-hairpin-helix motif LQS91_09070 PF17763 Glutaminase/Asparaginase C-terminal domain LQS91_09070 PF00710 Asparaginase, N-terminal LQS91_09075 PF00375 Sodium:dicarboxylate symporter family LQS91_09080 PF00155 Aminotransferase class I and II LQS91_09085 PF01641 SelR domain LQS91_09090 PF00255 Glutathione peroxidase LQS91_09095 PF12833 Helix-turn-helix domain LQS91_09095 PF12852 Cupin LQS91_09105 PF00155 Aminotransferase class I and II LQS91_09110 PF08335 GlnD PII-uridylyltransferase LQS91_09110 PF01966 HD domain LQS91_09110 PF01909 Nucleotidyltransferase domain LQS91_09115 PF02222 ATP-grasp domain LQS91_09125 PF05437 Branched-chain amino acid transport protein (AzlD) LQS91_09130 PF03591 AzlC protein LQS91_09155 PF06071 Protein of unknown function (DUF933) LQS91_09155 PF01926 50S ribosome-binding GTPase LQS91_09160 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_09165 PF09383 NIL domain LQS91_09165 PF00005 ABC transporter LQS91_09170 PF03180 NLPA lipoprotein LQS91_09175 PF03180 NLPA lipoprotein LQS91_09180 PF00296 Luciferase-like monooxygenase LQS91_09190 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LQS91_09190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_09205 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_09210 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_09215 PF00005 ABC transporter LQS91_09225 PF01037 Lrp/AsnC ligand binding domain LQS91_09230 PF01709 Transcriptional regulator LQS91_09240 PF00440 Bacterial regulatory proteins, tetR family LQS91_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_09260 PF03466 LysR substrate binding domain LQS91_09270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LQS91_09280 PF00892 EamA-like transporter family LQS91_09300 PF13953 PapC C-terminal domain LQS91_09300 PF00577 Outer membrane usher protein LQS91_09300 PF13954 PapC N-terminal domain LQS91_09305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LQS91_09305 PF02753 Pili assembly chaperone PapD, C-terminal domain LQS91_09310 PF16970 Type-1 fimbrial protein, A LQS91_09325 PF06968 Biotin and Thiamin Synthesis associated domain LQS91_09325 PF04055 Radical SAM superfamily LQS91_09330 PF08331 Domain of unknown function (DUF1730) LQS91_09335 PF01256 Carbohydrate kinase LQS91_09335 PF03853 YjeF-related protein N-terminus LQS91_09340 PF02075 Crossover junction endodeoxyribonuclease RuvC LQS91_09355 PF00905 Penicillin binding protein transpeptidase domain LQS91_09375 PF02773 S-adenosylmethionine synthetase, C-terminal domain LQS91_09375 PF02772 S-adenosylmethionine synthetase, central domain LQS91_09375 PF00438 S-adenosylmethionine synthetase, N-terminal domain LQS91_09380 PF02780 Transketolase, C-terminal domain LQS91_09380 PF02779 Transketolase, pyrimidine binding domain LQS91_09380 PF00456 Transketolase, thiamine diphosphate binding domain LQS91_09390 PF04264 YceI-like domain LQS91_09400 PF09992 Phosphodiester glycosidase LQS91_09410 PF05958 tRNA (Uracil-5-)-methyltransferase LQS91_09415 PF04229 GrpB protein LQS91_09420 PF00171 Aldehyde dehydrogenase family LQS91_09420 PF01619 Proline dehydrogenase LQS91_09420 PF14850 DNA-binding domain of Proline dehydrogenase LQS91_09420 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LQS91_09425 PF01037 Lrp/AsnC ligand binding domain LQS91_09430 PF00474 Sodium:solute symporter family LQS91_09435 PF02146 Sir2 family LQS91_09440 PF01597 Glycine cleavage H-protein LQS91_09445 PF12833 Helix-turn-helix domain LQS91_09445 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQS91_09455 PF00005 ABC transporter LQS91_09455 PF00664 ABC transporter transmembrane region LQS91_09460 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LQS91_09465 PF06912 Protein of unknown function (DUF1275) LQS91_09470 PF00375 Sodium:dicarboxylate symporter family LQS91_09485 PF08007 Cupin superfamily protein LQS91_09490 PF02545 Maf-like protein LQS91_09500 PF00162 Phosphoglycerate kinase LQS91_09510 PF01116 Fructose-bisphosphate aldolase class-II LQS91_09515 PF00639 PPIC-type PPIASE domain LQS91_09515 PF09312 SurA N-terminal domain LQS91_09520 PF04453 LPS transport system D LQS91_09520 PF03968 OstA-like protein LQS91_09525 PF01636 Phosphotransferase enzyme family LQS91_09530 PF00483 Nucleotidyl transferase LQS91_09535 PF02527 rRNA small subunit methyltransferase G LQS91_09540 PF13614 AAA domain LQS91_09545 PF17762 HTH domain found in ParB protein LQS91_09545 PF02195 ParB-like nuclease domain LQS91_09550 PF01618 MotA/TolQ/ExbB proton channel family LQS91_09560 PF00664 ABC transporter transmembrane region LQS91_09560 PF00005 ABC transporter LQS91_09565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LQS91_09570 PF02348 Cytidylyltransferase LQS91_09575 PF09115 DNA polymerase III, delta subunit, C terminal LQS91_09585 PF01026 TatD related DNase LQS91_09600 PF02501 Type II secretion system (T2SS), protein I LQS91_09600 PF07963 Prokaryotic N-terminal methylation motif LQS91_09605 PF07963 Prokaryotic N-terminal methylation motif LQS91_09605 PF11612 Type II secretion system (T2SS), protein J LQS91_09610 PF03934 Type II secretion system (T2SS), protein K LQS91_09620 PF03167 Uracil DNA glycosylase superfamily LQS91_09630 PF14437 MafB19-like deaminase LQS91_09640 PF02224 Cytidylate kinase LQS91_09645 PF00575 S1 RNA binding domain LQS91_09650 PF00216 Bacterial DNA-binding protein LQS91_09660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LQS91_09670 PF00743 Flavin-binding monooxygenase-like LQS91_09680 PF03969 AFG1-like ATPase LQS91_09685 PF01274 Malate synthase LQS91_09695 PF02472 Biopolymer transport protein ExbD/TolR LQS91_09700 PF02472 Biopolymer transport protein ExbD/TolR LQS91_09705 PF01618 MotA/TolQ/ExbB proton channel family LQS91_09710 PF03544 Gram-negative bacterial TonB protein C-terminal LQS91_09715 PF07715 TonB-dependent Receptor Plug Domain LQS91_09715 PF00593 TonB dependent receptor LQS91_09730 PF01432 Peptidase family M3 LQS91_09735 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_09740 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_09745 PF00005 ABC transporter LQS91_09745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LQS91_09760 PF00459 Inositol monophosphatase family LQS91_09770 PF01649 Ribosomal protein S20 LQS91_09775 PF13460 NAD(P)H-binding LQS91_09780 PF03737 Aldolase/RraA LQS91_09800 PF17757 UvrB interaction domain LQS91_09800 PF03461 TRCF domain LQS91_09800 PF00271 Helicase conserved C-terminal domain LQS91_09800 PF02559 CarD-like/TRCF domain LQS91_09800 PF00270 DEAD/DEAH box helicase LQS91_09810 PF00211 Adenylate and Guanylate cyclase catalytic domain LQS91_09815 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_09820 PF00012 Hsp70 protein LQS91_09825 PF00226 DnaJ domain LQS91_09825 PF07743 HSCB C-terminal oligomerisation domain LQS91_09830 PF01521 Iron-sulphur cluster biosynthesis LQS91_09835 PF01592 NifU-like N terminal domain LQS91_09840 PF00266 Aminotransferase class-V LQS91_09845 PF02082 Transcriptional regulator LQS91_09860 PF00216 Bacterial DNA-binding protein LQS91_09865 PF09312 SurA N-terminal domain LQS91_09865 PF00639 PPIC-type PPIASE domain LQS91_09870 PF12833 Helix-turn-helix domain LQS91_09870 PF12852 Cupin LQS91_09875 PF00487 Fatty acid desaturase LQS91_09880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_09880 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_09880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_09885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_09885 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_09885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_09890 PF03109 ABC1 family LQS91_09900 PF04073 Aminoacyl-tRNA editing domain LQS91_09905 PF06276 Ferric iron reductase FhuF-like transporter LQS91_09905 PF04183 IucA / IucC family LQS91_09910 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LQS91_09915 PF07690 Major Facilitator Superfamily LQS91_09920 PF06276 Ferric iron reductase FhuF-like transporter LQS91_09920 PF04183 IucA / IucC family LQS91_09925 PF06276 Ferric iron reductase FhuF-like transporter LQS91_09925 PF04183 IucA / IucC family LQS91_09935 PF03737 Aldolase/RraA LQS91_09940 PF00593 TonB dependent receptor LQS91_09940 PF07715 TonB-dependent Receptor Plug Domain LQS91_09965 PF13419 Haloacid dehalogenase-like hydrolase LQS91_09975 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LQS91_09980 PF02277 Phosphoribosyltransferase LQS91_09985 PF00300 Histidine phosphatase superfamily (branch 1) LQS91_09995 PF02654 Cobalamin-5-phosphate synthase LQS91_10000 PF00793 DAHP synthetase I family LQS91_10005 PF01925 Sulfite exporter TauE/SafE LQS91_10025 PF07715 TonB-dependent Receptor Plug Domain LQS91_10025 PF00593 TonB dependent receptor LQS91_10030 PF02684 Lipid-A-disaccharide synthetase LQS91_10055 PF01230 HIT domain LQS91_10085 PF08241 Methyltransferase domain LQS91_10090 PF00561 alpha/beta hydrolase fold LQS91_10095 PF01053 Cys/Met metabolism PLP-dependent enzyme LQS91_10105 PF02575 YbaB/EbfC DNA-binding family LQS91_10110 PF02132 RecR protein LQS91_10110 PF13662 Toprim domain LQS91_10115 PF00570 HRDC domain LQS91_10115 PF01612 3'-5' exonuclease LQS91_10135 PF05166 YcgL domain LQS91_10145 PF01434 Peptidase family M41 LQS91_10145 PF17862 AAA+ lid domain LQS91_10145 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_10155 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_10160 PF05175 Methyltransferase small domain LQS91_10165 PF01264 Chorismate synthase LQS91_10170 PF08448 PAS fold LQS91_10170 PF00990 Diguanylate cyclase, GGDEF domain LQS91_10185 PF04055 Radical SAM superfamily LQS91_10190 PF00676 Dehydrogenase E1 component LQS91_10195 PF02779 Transketolase, pyrimidine binding domain LQS91_10195 PF02780 Transketolase, C-terminal domain LQS91_10200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQS91_10200 PF02817 e3 binding domain LQS91_10200 PF00364 Biotin-requiring enzyme LQS91_10205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQS91_10205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_10210 PF00106 short chain dehydrogenase LQS91_10215 PF00107 Zinc-binding dehydrogenase LQS91_10215 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_10220 PF01062 Bestrophin, RFP-TM, chloride channel LQS91_10225 PF02954 Bacterial regulatory protein, Fis family LQS91_10225 PF00072 Response regulator receiver domain LQS91_10225 PF00158 Sigma-54 interaction domain LQS91_10230 PF04273 Putative phosphatase (DUF442) LQS91_10230 PF00753 Metallo-beta-lactamase superfamily LQS91_10245 PF01925 Sulfite exporter TauE/SafE LQS91_10260 PF06445 GyrI-like small molecule binding domain LQS91_10260 PF12833 Helix-turn-helix domain LQS91_10265 PF01638 HxlR-like helix-turn-helix LQS91_10270 PF02525 Flavodoxin-like fold LQS91_10280 PF00392 Bacterial regulatory proteins, gntR family LQS91_10280 PF07702 UTRA domain LQS91_10295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LQS91_10300 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_10305 PF00005 ABC transporter LQS91_10320 PF00083 Sugar (and other) transporter LQS91_10325 PF00593 TonB dependent receptor LQS91_10325 PF07715 TonB-dependent Receptor Plug Domain LQS91_10330 PF00206 Lyase LQS91_10330 PF10415 Fumarase C C-terminus LQS91_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10345 PF03466 LysR substrate binding domain LQS91_10350 PF03466 LysR substrate binding domain LQS91_10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10355 PF00108 Thiolase, N-terminal domain LQS91_10355 PF02803 Thiolase, C-terminal domain LQS91_10360 PF02667 Short chain fatty acid transporter LQS91_10365 PF01144 Coenzyme A transferase LQS91_10370 PF01144 Coenzyme A transferase LQS91_10375 PF03466 LysR substrate binding domain LQS91_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10395 PF12833 Helix-turn-helix domain LQS91_10395 PF06719 AraC-type transcriptional regulator N-terminus LQS91_10400 PF07690 Major Facilitator Superfamily LQS91_10405 PF01738 Dienelactone hydrolase family LQS91_10420 PF01613 Flavin reductase like domain LQS91_10430 PF14525 AraC-binding-like domain LQS91_10430 PF12833 Helix-turn-helix domain LQS91_10435 PF00970 Oxidoreductase FAD-binding domain LQS91_10435 PF00175 Oxidoreductase NAD-binding domain LQS91_10435 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_10440 PF00866 Ring hydroxylating beta subunit LQS91_10445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LQS91_10445 PF00355 Rieske [2Fe-2S] domain LQS91_10450 PF03459 TOBE domain LQS91_10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10465 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_10470 PF00005 ABC transporter LQS91_10470 PF03459 TOBE domain LQS91_10475 PF00106 short chain dehydrogenase LQS91_10480 PF00550 Phosphopantetheine attachment site LQS91_10480 PF00857 Isochorismatase family LQS91_10490 PF00149 Calcineurin-like phosphoesterase LQS91_10495 PF13089 Polyphosphate kinase N-terminal domain LQS91_10495 PF02503 Polyphosphate kinase middle domain LQS91_10495 PF13090 Polyphosphate kinase C-terminal domain 2 LQS91_10495 PF17941 Polyphosphate kinase C-terminal domain 1 LQS91_10500 PF08042 PqqA family LQS91_10505 PF12706 Beta-lactamase superfamily domain LQS91_10510 PF03070 TENA/THI-4/PQQC family LQS91_10515 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LQS91_10520 PF13186 Iron-sulfur cluster-binding domain LQS91_10520 PF04055 Radical SAM superfamily LQS91_10525 PF01244 Membrane dipeptidase (Peptidase family M19) LQS91_10540 PF13091 PLD-like domain LQS91_10555 PF00199 Catalase LQS91_10565 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_10565 PF00107 Zinc-binding dehydrogenase LQS91_10580 PF13953 PapC C-terminal domain LQS91_10580 PF13954 PapC N-terminal domain LQS91_10580 PF00577 Outer membrane usher protein LQS91_10585 PF02753 Pili assembly chaperone PapD, C-terminal domain LQS91_10585 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LQS91_10590 PF16970 Type-1 fimbrial protein, A LQS91_10610 PF01266 FAD dependent oxidoreductase LQS91_10625 PF00743 Flavin-binding monooxygenase-like LQS91_10630 PF12146 Serine aminopeptidase, S33 LQS91_10635 PF02321 Outer membrane efflux protein LQS91_10640 PF00873 AcrB/AcrD/AcrF family LQS91_10645 PF00529 HlyD membrane-fusion protein of T1SS LQS91_10645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQS91_10650 PF00072 Response regulator receiver domain LQS91_10650 PF00486 Transcriptional regulatory protein, C terminal LQS91_10655 PF00672 HAMP domain LQS91_10655 PF00512 His Kinase A (phospho-acceptor) domain LQS91_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_10655 PF16527 Two-component sensor protein CpxA, periplasmic domain LQS91_10665 PF12833 Helix-turn-helix domain LQS91_10665 PF02311 AraC-like ligand binding domain LQS91_10670 PF12146 Serine aminopeptidase, S33 LQS91_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10685 PF03466 LysR substrate binding domain LQS91_10690 PF12146 Serine aminopeptidase, S33 LQS91_10695 PF13673 Acetyltransferase (GNAT) domain LQS91_10725 PF17757 UvrB interaction domain LQS91_10725 PF12344 Ultra-violet resistance protein B LQS91_10725 PF02151 UvrB/uvrC motif LQS91_10725 PF04851 Type III restriction enzyme, res subunit LQS91_10725 PF00271 Helicase conserved C-terminal domain LQS91_10730 PF13291 ACT domain LQS91_10730 PF04607 Region found in RelA / SpoT proteins LQS91_10730 PF02824 TGS domain LQS91_10740 PF01975 Survival protein SurE LQS91_10765 PF07690 Major Facilitator Superfamily LQS91_10770 PF13533 Biotin-lipoyl like LQS91_10775 PF01425 Amidase LQS91_10780 PF00196 Bacterial regulatory proteins, luxR family LQS91_10780 PF03472 Autoinducer binding domain LQS91_10795 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LQS91_10800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LQS91_10800 PF14572 Phosphoribosyl synthetase-associated domain LQS91_10815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LQS91_10815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LQS91_10820 PF07690 Major Facilitator Superfamily LQS91_10825 PF01370 NAD dependent epimerase/dehydratase family LQS91_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10830 PF03466 LysR substrate binding domain LQS91_10840 PF00920 Dehydratase family LQS91_10845 PF00171 Aldehyde dehydrogenase family LQS91_10860 PF00529 HlyD membrane-fusion protein of T1SS LQS91_10860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQS91_10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_10875 PF03466 LysR substrate binding domain LQS91_10900 PF00186 Dihydrofolate reductase LQS91_10905 PF00583 Acetyltransferase (GNAT) family LQS91_10935 PF18623 TnsE C-terminal domain LQS91_10940 PF06527 TniQ LQS91_10940 PF15978 Tn7-like transposition protein D LQS91_10945 PF13401 AAA domain LQS91_10945 PF11426 Tn7 transposition regulator TnsC LQS91_10950 PF00665 Integrase core domain LQS91_10955 PF08722 TnsA endonuclease N terminal LQS91_10955 PF08721 TnsA endonuclease C terminal LQS91_10965 PF07702 UTRA domain LQS91_10965 PF00392 Bacterial regulatory proteins, gntR family LQS91_10975 PF04909 Amidohydrolase LQS91_10980 PF07690 Major Facilitator Superfamily LQS91_10985 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) LQS91_11025 PF07687 Peptidase dimerisation domain LQS91_11025 PF01546 Peptidase family M20/M25/M40 LQS91_11035 PF00999 Sodium/hydrogen exchanger family LQS91_11035 PF02254 TrkA-N domain LQS91_11040 PF07995 Glucose / Sorbosone dehydrogenase LQS91_11045 PF03466 LysR substrate binding domain LQS91_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_11050 PF00857 Isochorismatase family LQS91_11065 PF07995 Glucose / Sorbosone dehydrogenase LQS91_11070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_11080 PF06314 Acetoacetate decarboxylase (ADC) LQS91_11090 PF12833 Helix-turn-helix domain LQS91_11090 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LQS91_11095 PF08359 YsiA-like protein, C-terminal region LQS91_11095 PF00440 Bacterial regulatory proteins, tetR family LQS91_11100 PF12706 Beta-lactamase superfamily domain LQS91_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_11120 PF09278 MerR, DNA binding LQS91_11120 PF00376 MerR family regulatory protein LQS91_11130 PF00106 short chain dehydrogenase LQS91_11135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_11135 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_11140 PF00561 alpha/beta hydrolase fold LQS91_11150 PF00171 Aldehyde dehydrogenase family LQS91_11160 PF07690 Major Facilitator Superfamily LQS91_11165 PF00920 Dehydratase family LQS91_11170 PF07729 FCD domain LQS91_11170 PF00392 Bacterial regulatory proteins, gntR family LQS91_11180 PF03466 LysR substrate binding domain LQS91_11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_11185 PF13378 Enolase C-terminal domain-like LQS91_11185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LQS91_11190 PF02426 Muconolactone delta-isomerase LQS91_11195 PF04444 Catechol dioxygenase N terminus LQS91_11195 PF00775 Dioxygenase LQS91_11200 PF01144 Coenzyme A transferase LQS91_11205 PF01144 Coenzyme A transferase LQS91_11210 PF02803 Thiolase, C-terminal domain LQS91_11210 PF00108 Thiolase, N-terminal domain LQS91_11215 PF12146 Serine aminopeptidase, S33 LQS91_11220 PF01804 Penicillin amidase LQS91_11225 PF00171 Aldehyde dehydrogenase family LQS91_11235 PF02728 Copper amine oxidase, N3 domain LQS91_11235 PF02727 Copper amine oxidase, N2 domain LQS91_11235 PF07833 Copper amine oxidase N-terminal domain LQS91_11235 PF01179 Copper amine oxidase, enzyme domain LQS91_11240 PF12833 Helix-turn-helix domain LQS91_11240 PF02311 AraC-like ligand binding domain LQS91_11245 PF01613 Flavin reductase like domain LQS91_11250 PF00175 Oxidoreductase NAD-binding domain LQS91_11250 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_11265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LQS91_11265 PF00355 Rieske [2Fe-2S] domain LQS91_11280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LQS91_11285 PF01425 Amidase LQS91_11300 PF07690 Major Facilitator Superfamily LQS91_11310 PF00106 short chain dehydrogenase LQS91_11325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_11325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_11325 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_11330 PF03466 LysR substrate binding domain LQS91_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_11335 PF09339 IclR helix-turn-helix domain LQS91_11335 PF01614 Bacterial transcriptional regulator LQS91_11340 PF00753 Metallo-beta-lactamase superfamily LQS91_11350 PF04143 Sulphur transport LQS91_11360 PF01011 PQQ enzyme repeat LQS91_11360 PF13360 PQQ-like domain LQS91_11365 PF04966 Carbohydrate-selective porin, OprB family LQS91_11370 PF05048 Periplasmic copper-binding protein (NosD) LQS91_11375 PF01487 Type I 3-dehydroquinase LQS91_11380 PF00775 Dioxygenase LQS91_11385 PF00775 Dioxygenase LQS91_11385 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LQS91_11390 PF02627 Carboxymuconolactone decarboxylase family LQS91_11395 PF07690 Major Facilitator Superfamily LQS91_11400 PF00561 alpha/beta hydrolase fold LQS91_11405 PF00206 Lyase LQS91_11405 PF10397 Adenylosuccinate lyase C-terminus LQS91_11410 PF00108 Thiolase, N-terminal domain LQS91_11410 PF02803 Thiolase, C-terminal domain LQS91_11415 PF01144 Coenzyme A transferase LQS91_11420 PF01144 Coenzyme A transferase LQS91_11425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LQS91_11430 PF04977 Septum formation initiator LQS91_11435 PF04239 Protein of unknown function (DUF421) LQS91_11440 PF00113 Enolase, C-terminal TIM barrel domain LQS91_11440 PF03952 Enolase, N-terminal domain LQS91_11445 PF00793 DAHP synthetase I family LQS91_11450 PF00117 Glutamine amidotransferase class-I LQS91_11450 PF06418 CTP synthase N-terminus LQS91_11480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_11480 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_11495 PF00793 DAHP synthetase I family LQS91_11500 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LQS91_11505 PF02861 Clp amino terminal domain, pathogenicity island component LQS91_11505 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_11505 PF07724 AAA domain (Cdc48 subfamily) LQS91_11505 PF17871 AAA lid domain LQS91_11505 PF10431 C-terminal, D2-small domain, of ClpB protein LQS91_11510 PF02617 ATP-dependent Clp protease adaptor protein ClpS LQS91_11520 PF01118 Semialdehyde dehydrogenase, NAD binding domain LQS91_11520 PF02774 Semialdehyde dehydrogenase, dimerisation domain LQS91_11535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LQS91_11540 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_11540 PF00585 C-terminal regulatory domain of Threonine dehydratase LQS91_11545 PF02254 TrkA-N domain LQS91_11545 PF02080 TrkA-C domain LQS91_11550 PF02386 Cation transport protein LQS91_11555 PF02253 Phospholipase A1 LQS91_11560 PF08367 Peptidase M16C associated LQS91_11560 PF05193 Peptidase M16 inactive domain LQS91_11560 PF00675 Insulinase (Peptidase family M16) LQS91_11570 PF00294 pfkB family carbohydrate kinase LQS91_11580 PF07290 Protein of unknown function (DUF1449) LQS91_11590 PF01654 Cytochrome bd terminal oxidase subunit I LQS91_11595 PF02322 Cytochrome bd terminal oxidase subunit II LQS91_11600 PF08173 Membrane bound YbgT-like protein LQS91_11610 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LQS91_11620 PF02881 SRP54-type protein, helical bundle domain LQS91_11620 PF00448 SRP54-type protein, GTPase domain LQS91_11645 PF00571 CBS domain LQS91_11645 PF00478 IMP dehydrogenase / GMP reductase domain LQS91_11650 PF00202 Aminotransferase class-III LQS91_11655 PF00462 Glutaredoxin LQS91_11665 PF03466 LysR substrate binding domain LQS91_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_11670 PF00557 Metallopeptidase family M24 LQS91_11675 PF05525 Branched-chain amino acid transport protein LQS91_11700 PF00381 PTS HPr component phosphorylation site LQS91_11700 PF00391 PEP-utilising enzyme, mobile domain LQS91_11700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LQS91_11700 PF05524 PEP-utilising enzyme, N-terminal LQS91_11700 PF02896 PEP-utilising enzyme, TIM barrel domain LQS91_11705 PF00294 pfkB family carbohydrate kinase LQS91_11710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LQS91_11710 PF02378 Phosphotransferase system, EIIC LQS91_11730 PF03707 Bacterial signalling protein N terminal repeat LQS91_11730 PF00563 EAL domain LQS91_11730 PF00990 Diguanylate cyclase, GGDEF domain LQS91_11740 PF07995 Glucose / Sorbosone dehydrogenase LQS91_11745 PF02586 SOS response associated peptidase (SRAP) LQS91_11750 PF01740 STAS domain LQS91_11750 PF00916 Sulfate permease family LQS91_11755 PF05922 Peptidase inhibitor I9 LQS91_11755 PF00082 Subtilase family LQS91_11770 PF00324 Amino acid permease LQS91_11775 PF00266 Aminotransferase class-V LQS91_11780 PF01037 Lrp/AsnC ligand binding domain LQS91_11805 PF13419 Haloacid dehalogenase-like hydrolase LQS91_11810 PF01479 S4 domain LQS91_11815 PF00154 recA bacterial DNA recombination protein LQS91_11820 PF02631 RecX family LQS91_11835 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_11835 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LQS91_11840 PF07977 FabA-like domain LQS91_11845 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_11845 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LQS91_11855 PF01103 Surface antigen LQS91_11855 PF07244 Surface antigen variable number repeat LQS91_11860 PF17820 PDZ domain LQS91_11860 PF13180 PDZ domain LQS91_11860 PF02163 Peptidase family M50 LQS91_11865 PF13288 DXP reductoisomerase C-terminal domain LQS91_11865 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LQS91_11865 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LQS91_11875 PF01255 Putative undecaprenyl diphosphate synthase LQS91_11880 PF01765 Ribosome recycling factor LQS91_11885 PF00696 Amino acid kinase family LQS91_11890 PF00919 Uncharacterized protein family UPF0004 LQS91_11890 PF18693 TRAM domain LQS91_11890 PF04055 Radical SAM superfamily LQS91_11900 PF00989 PAS fold LQS91_11900 PF00512 His Kinase A (phospho-acceptor) domain LQS91_11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_11905 PF00072 Response regulator receiver domain LQS91_11905 PF00158 Sigma-54 interaction domain LQS91_11905 PF02954 Bacterial regulatory protein, Fis family LQS91_11910 PF00440 Bacterial regulatory proteins, tetR family LQS91_11915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LQS91_11915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LQS91_11925 PF02542 YgbB family LQS91_11935 PF01266 FAD dependent oxidoreductase LQS91_11955 PF10415 Fumarase C C-terminus LQS91_11955 PF00206 Lyase LQS91_11960 PF16363 GDP-mannose 4,6 dehydratase LQS91_11965 PF02635 DsrE/DsrF-like family LQS91_11985 PF00892 EamA-like transporter family LQS91_11990 PF00155 Aminotransferase class I and II LQS91_11990 PF00392 Bacterial regulatory proteins, gntR family LQS91_11995 PF01638 HxlR-like helix-turn-helix LQS91_12000 PF03453 MoeA N-terminal region (domain I and II) LQS91_12000 PF03454 MoeA C-terminal region (domain IV) LQS91_12000 PF00994 Probable molybdopterin binding domain LQS91_12005 PF01967 MoaC family LQS91_12005 PF00994 Probable molybdopterin binding domain LQS91_12010 PF02391 MoaE protein LQS91_12020 PF06463 Molybdenum Cofactor Synthesis C LQS91_12020 PF04055 Radical SAM superfamily LQS91_12025 PF00384 Molybdopterin oxidoreductase LQS91_12025 PF01568 Molydopterin dinucleotide binding domain LQS91_12025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQS91_12030 PF12804 MobA-like NTP transferase domain LQS91_12035 PF04324 BFD-like [2Fe-2S] binding domain LQS91_12035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LQS91_12035 PF00384 Molybdopterin oxidoreductase LQS91_12035 PF01568 Molydopterin dinucleotide binding domain LQS91_12040 PF04324 BFD-like [2Fe-2S] binding domain LQS91_12040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQS91_12040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQS91_12040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_12040 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQS91_12045 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_12045 PF18267 Rubredoxin NAD+ reductase C-terminal domain LQS91_12045 PF13806 Rieske-like [2Fe-2S] domain LQS91_12045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQS91_12045 PF04324 BFD-like [2Fe-2S] binding domain LQS91_12045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQS91_12055 PF00072 Response regulator receiver domain LQS91_12055 PF00486 Transcriptional regulatory protein, C terminal LQS91_12060 PF00005 ABC transporter LQS91_12070 PF11799 impB/mucB/samB family C-terminal domain LQS91_12070 PF13438 Domain of unknown function (DUF4113) LQS91_12070 PF00817 impB/mucB/samB family LQS91_12075 PF01220 Dehydroquinase class II LQS91_12080 PF00364 Biotin-requiring enzyme LQS91_12085 PF02785 Biotin carboxylase C-terminal domain LQS91_12085 PF00289 Biotin carboxylase, N-terminal domain LQS91_12085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQS91_12095 PF12832 MFS_1 like family LQS91_12115 PF01645 Conserved region in glutamate synthase LQS91_12130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LQS91_12130 PF01565 FAD binding domain LQS91_12135 PF01451 Low molecular weight phosphotyrosine protein phosphatase LQS91_12145 PF00465 Iron-containing alcohol dehydrogenase LQS91_12150 PF03061 Thioesterase superfamily LQS91_12155 PF05506 Domain of unknown function (DUF756) LQS91_12155 PF04185 Phosphoesterase family LQS91_12160 PF12170 DNA polymerase III tau subunit V interacting with alpha LQS91_12160 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LQS91_12160 PF12169 DNA polymerase III subunits gamma and tau domain III LQS91_12165 PF07690 Major Facilitator Superfamily LQS91_12175 PF00144 Beta-lactamase LQS91_12180 PF01575 MaoC like domain LQS91_12190 PF00108 Thiolase, N-terminal domain LQS91_12190 PF02803 Thiolase, C-terminal domain LQS91_12200 PF03466 LysR substrate binding domain LQS91_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_12205 PF00923 Transaldolase/Fructose-6-phosphate aldolase LQS91_12210 PF01810 LysE type translocator LQS91_12215 PF01037 Lrp/AsnC ligand binding domain LQS91_12220 PF03594 Benzoate membrane transport protein LQS91_12225 PF02308 MgtC family LQS91_12230 PF00690 Cation transporter/ATPase, N-terminus LQS91_12230 PF00689 Cation transporting ATPase, C-terminus LQS91_12250 PF00582 Universal stress protein family LQS91_12255 PF00005 ABC transporter LQS91_12255 PF12848 ABC transporter LQS91_12275 PF07715 TonB-dependent Receptor Plug Domain LQS91_12275 PF00593 TonB dependent receptor LQS91_12310 PF00924 Mechanosensitive ion channel LQS91_12315 PF07715 TonB-dependent Receptor Plug Domain LQS91_12315 PF00593 TonB dependent receptor LQS91_12320 PF00440 Bacterial regulatory proteins, tetR family LQS91_12335 PF02224 Cytidylate kinase LQS91_12345 PF01037 Lrp/AsnC ligand binding domain LQS91_12350 PF01817 Chorismate mutase type II LQS91_12375 PF00577 Outer membrane usher protein LQS91_12375 PF13954 PapC N-terminal domain LQS91_12375 PF13953 PapC C-terminal domain LQS91_12390 PF00665 Integrase core domain LQS91_12390 PF13936 Helix-turn-helix domain LQS91_12395 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LQS91_12395 PF11940 Domain of unknown function (DUF3458) Ig-like fold LQS91_12395 PF01433 Peptidase family M1 domain LQS91_12410 PF02110 Hydroxyethylthiazole kinase family LQS91_12420 PF05970 PIF1-like helicase LQS91_12420 PF14493 Helix-turn-helix domain LQS91_12425 PF00465 Iron-containing alcohol dehydrogenase LQS91_12440 PF00171 Aldehyde dehydrogenase family LQS91_12445 PF13520 Amino acid permease LQS91_12450 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LQS91_12455 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LQS91_12460 PF00117 Glutamine amidotransferase class-I LQS91_12460 PF00958 GMP synthase C terminal domain LQS91_12460 PF02540 NAD synthase LQS91_12465 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LQS91_12465 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQS91_12470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LQS91_12475 PF00149 Calcineurin-like phosphoesterase LQS91_12485 PF00881 Nitroreductase family LQS91_12495 PF17209 Hfq protein LQS91_12505 PF01119 DNA mismatch repair protein, C-terminal domain LQS91_12505 PF08676 MutL C terminal dimerisation domain LQS91_12510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LQS91_12515 PF00849 RNA pseudouridylate synthase LQS91_12515 PF01479 S4 domain LQS91_12530 PF01479 S4 domain LQS91_12530 PF00849 RNA pseudouridylate synthase LQS91_12540 PF04284 Protein of unknown function (DUF441) LQS91_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_12545 PF03466 LysR substrate binding domain LQS91_12590 PF00216 Bacterial DNA-binding protein LQS91_12620 PF13401 AAA domain LQS91_12620 PF01471 Putative peptidoglycan binding domain LQS91_12690 PF03237 Terminase-like family LQS91_12700 PF06074 Protein of unknown function (DUF935) LQS91_12705 PF04233 Phage Mu protein F like protein LQS91_12710 PF05069 Phage virion morphogenesis family LQS91_12725 PF10124 Mu-like prophage major head subunit gpT LQS91_12820 PF07690 Major Facilitator Superfamily LQS91_12825 PF00520 Ion transport protein LQS91_12825 PF00027 Cyclic nucleotide-binding domain LQS91_12835 PF00330 Aconitase family (aconitate hydratase) LQS91_12835 PF06434 Aconitate hydratase 2 N-terminus LQS91_12835 PF11791 Aconitate B N-terminal domain LQS91_12850 PF01103 Surface antigen LQS91_12850 PF07244 Surface antigen variable number repeat LQS91_12850 PF17243 POTRA domain TamA domain 1 LQS91_12855 PF07690 Major Facilitator Superfamily LQS91_12860 PF03232 Ubiquinone biosynthesis protein COQ7 LQS91_12870 PF00120 Glutamine synthetase, catalytic domain LQS91_12875 PF00486 Transcriptional regulatory protein, C terminal LQS91_12875 PF00072 Response regulator receiver domain LQS91_12880 PF13493 Domain of unknown function (DUF4118) LQS91_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_12880 PF00512 His Kinase A (phospho-acceptor) domain LQS91_12880 PF02702 Osmosensitive K+ channel His kinase sensor domain LQS91_12885 PF02669 K+-transporting ATPase, c chain LQS91_12895 PF03814 Potassium-transporting ATPase A subunit LQS91_12910 PF03109 ABC1 family LQS91_12915 PF00899 ThiF family LQS91_12920 PF01613 Flavin reductase like domain LQS91_12925 PF13193 AMP-binding enzyme C-terminal domain LQS91_12925 PF00501 AMP-binding enzyme LQS91_12930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_12930 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_12930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_12935 PF00106 short chain dehydrogenase LQS91_12940 PF12833 Helix-turn-helix domain LQS91_12950 PF09084 NMT1/THI5 like LQS91_12955 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_12960 PF17827 PrmC N-terminal domain LQS91_12960 PF13847 Methyltransferase domain LQS91_12965 PF00472 RF-1 domain LQS91_12965 PF03462 PCRF domain LQS91_12975 PF03466 LysR substrate binding domain LQS91_12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_12990 PF00296 Luciferase-like monooxygenase LQS91_13000 PF13994 PgaD-like protein LQS91_13005 PF00535 Glycosyl transferase family 2 LQS91_13010 PF14883 Hypothetical glycosyl hydrolase family 13 LQS91_13010 PF01522 Polysaccharide deacetylase LQS91_13020 PF03618 Kinase/pyrophosphorylase LQS91_13025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LQS91_13025 PF02896 PEP-utilising enzyme, TIM barrel domain LQS91_13025 PF00391 PEP-utilising enzyme, mobile domain LQS91_13035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LQS91_13035 PF06481 COX Aromatic Rich Motif LQS91_13040 PF00115 Cytochrome C and Quinol oxidase polypeptide I LQS91_13045 PF00510 Cytochrome c oxidase subunit III LQS91_13050 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LQS91_13055 PF01040 UbiA prenyltransferase family LQS91_13060 PF01250 Ribosomal protein S6 LQS91_13065 PF01084 Ribosomal protein S18 LQS91_13070 PF03948 Ribosomal protein L9, C-terminal domain LQS91_13070 PF01281 Ribosomal protein L9, N-terminal domain LQS91_13075 PF00772 DnaB-like helicase N terminal domain LQS91_13075 PF03796 DnaB-like helicase C terminal domain LQS91_13080 PF01168 Alanine racemase, N-terminal domain LQS91_13080 PF00842 Alanine racemase, C-terminal domain LQS91_13090 PF08379 Bacterial transglutaminase-like N-terminal region LQS91_13090 PF01841 Transglutaminase-like superfamily LQS91_13100 PF14403 Circularly permuted ATP-grasp type 2 LQS91_13110 PF13932 GidA associated domain LQS91_13110 PF01134 Glucose inhibited division protein A LQS91_13130 PF02954 Bacterial regulatory protein, Fis family LQS91_13135 PF02142 MGS-like domain LQS91_13135 PF01808 AICARFT/IMPCHase bienzyme LQS91_13140 PF02843 Phosphoribosylglycinamide synthetase, C domain LQS91_13140 PF02844 Phosphoribosylglycinamide synthetase, N domain LQS91_13140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LQS91_13145 PF03180 NLPA lipoprotein LQS91_13150 PF00005 ABC transporter LQS91_13150 PF09383 NIL domain LQS91_13155 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_13160 PF16123 Hydroxyacylglutathione hydrolase C-terminus LQS91_13160 PF00753 Metallo-beta-lactamase superfamily LQS91_13170 PF00375 Sodium:dicarboxylate symporter family LQS91_13190 PF07995 Glucose / Sorbosone dehydrogenase LQS91_13195 PF00892 EamA-like transporter family LQS91_13200 PF01177 Asp/Glu/Hydantoin racemase LQS91_13220 PF00486 Transcriptional regulatory protein, C terminal LQS91_13220 PF00072 Response regulator receiver domain LQS91_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_13225 PF00512 His Kinase A (phospho-acceptor) domain LQS91_13225 PF08521 Two-component sensor kinase N-terminal LQS91_13265 PF00512 His Kinase A (phospho-acceptor) domain LQS91_13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_13265 PF00672 HAMP domain LQS91_13270 PF00486 Transcriptional regulatory protein, C terminal LQS91_13270 PF00072 Response regulator receiver domain LQS91_13280 PF00576 HIUase/Transthyretin family LQS91_13290 PF02470 MlaD protein LQS91_13295 PF04403 Paraquat-inducible protein A LQS91_13320 PF08946 Osmosensory transporter coiled coil LQS91_13320 PF00083 Sugar (and other) transporter LQS91_13380 PF00392 Bacterial regulatory proteins, gntR family LQS91_13380 PF07729 FCD domain LQS91_13395 PF00106 short chain dehydrogenase LQS91_13400 PF00248 Aldo/keto reductase family LQS91_13405 PF03466 LysR substrate binding domain LQS91_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_13415 PF03616 Sodium/glutamate symporter LQS91_13420 PF00561 alpha/beta hydrolase fold LQS91_13445 PF04076 Bacterial OB fold (BOF) protein LQS91_13475 PF00324 Amino acid permease LQS91_13480 PF00171 Aldehyde dehydrogenase family LQS91_13485 PF00202 Aminotransferase class-III LQS91_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_13490 PF03466 LysR substrate binding domain LQS91_13515 PF00069 Protein kinase domain LQS91_13535 PF00814 Glycoprotease family LQS91_13540 PF01165 Ribosomal protein S21 LQS91_13545 PF09424 Yqey-like protein LQS91_13550 PF01435 Peptidase family M48 LQS91_13555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQS91_13555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQS91_13570 PF00156 Phosphoribosyl transferase domain LQS91_13575 PF02674 Colicin V production protein LQS91_13580 PF01180 Dihydroorotate dehydrogenase LQS91_13600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LQS91_13600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LQS91_13605 PF00881 Nitroreductase family LQS91_13615 PF00271 Helicase conserved C-terminal domain LQS91_13615 PF00270 DEAD/DEAH box helicase LQS91_13620 PF00313 'Cold-shock' DNA-binding domain LQS91_13635 PF00140 Sigma-70 factor, region 1.2 LQS91_13635 PF04545 Sigma-70, region 4 LQS91_13635 PF04542 Sigma-70 region 2 LQS91_13640 PF04241 Protein of unknown function (DUF423) LQS91_13650 PF05690 Thiazole biosynthesis protein ThiG LQS91_13655 PF03883 Peroxide stress protein YaaA LQS91_13665 PF00753 Metallo-beta-lactamase superfamily LQS91_13670 PF07687 Peptidase dimerisation domain LQS91_13670 PF01546 Peptidase family M20/M25/M40 LQS91_13680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LQS91_13685 PF01817 Chorismate mutase type II LQS91_13685 PF01842 ACT domain LQS91_13685 PF00800 Prephenate dehydratase LQS91_13690 PF00756 Putative esterase LQS91_13695 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_13695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_13695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_13700 PF00375 Sodium:dicarboxylate symporter family LQS91_13705 PF02885 Glycosyl transferase family, helical bundle domain LQS91_13705 PF00591 Glycosyl transferase family, a/b domain LQS91_13710 PF07023 Protein of unknown function (DUF1315) LQS91_13715 PF01513 ATP-NAD kinase LQS91_13720 PF00912 Transglycosylase LQS91_13720 PF00905 Penicillin binding protein transpeptidase domain LQS91_13720 PF14814 Bifunctional transglycosylase second domain LQS91_13730 PF00293 NUDIX domain LQS91_13740 PF00512 His Kinase A (phospho-acceptor) domain LQS91_13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_13740 PF08521 Two-component sensor kinase N-terminal LQS91_13745 PF00072 Response regulator receiver domain LQS91_13745 PF00486 Transcriptional regulatory protein, C terminal LQS91_13755 PF00437 Type II/IV secretion system protein LQS91_13755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LQS91_13765 PF18389 TrmO C-terminal domain LQS91_13765 PF01980 tRNA-methyltransferase O LQS91_13770 PF00970 Oxidoreductase FAD-binding domain LQS91_13770 PF00175 Oxidoreductase NAD-binding domain LQS91_13775 PF02567 Phenazine biosynthesis-like protein LQS91_13780 PF00155 Aminotransferase class I and II LQS91_13780 PF00392 Bacterial regulatory proteins, gntR family LQS91_13785 PF16325 Peptidase family U32 C-terminal domain LQS91_13785 PF01136 Peptidase family U32 LQS91_13790 PF00037 4Fe-4S binding domain LQS91_13795 PF00893 Small Multidrug Resistance protein LQS91_13800 PF00005 ABC transporter LQS91_13805 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_13810 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_13815 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQS91_13820 PF03466 LysR substrate binding domain LQS91_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_13825 PF13533 Biotin-lipoyl like LQS91_13830 PF00873 AcrB/AcrD/AcrF family LQS91_13835 PF02321 Outer membrane efflux protein LQS91_13840 PF00464 Serine hydroxymethyltransferase LQS91_13920 PF01476 LysM domain LQS91_13920 PF01551 Peptidase family M23 LQS91_13920 PF08525 Opacity-associated protein A N-terminal motif LQS91_14100 PF00149 Calcineurin-like phosphoesterase LQS91_14150 PF00772 DnaB-like helicase N terminal domain LQS91_14150 PF03796 DnaB-like helicase C terminal domain LQS91_14150 PF14528 LAGLIDADG-like domain LQS91_14185 PF12161 HsdM N-terminal domain LQS91_14185 PF02384 N-6 DNA Methylase LQS91_14240 PF00589 Phage integrase family LQS91_14245 PF00005 ABC transporter LQS91_14250 PF01061 ABC-2 type transporter LQS91_14255 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LQS91_14255 PF14489 QueF-like protein LQS91_14265 PF01098 Cell cycle protein LQS91_14270 PF13406 Transglycosylase SLT domain LQS91_14275 PF03330 Lytic transglycolase LQS91_14275 PF05036 Sporulation related domain LQS91_14295 PF12833 Helix-turn-helix domain LQS91_14305 PF00889 Elongation factor TS LQS91_14310 PF00318 Ribosomal protein S2 LQS91_14315 PF00557 Metallopeptidase family M24 LQS91_14325 PF07690 Major Facilitator Superfamily LQS91_14335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQS91_14335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_14340 PF04055 Radical SAM superfamily LQS91_14345 PF09317 Domain of unknown function (DUF1974) LQS91_14345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_14345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_14360 PF05221 S-adenosyl-L-homocysteine hydrolase LQS91_14360 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LQS91_14365 PF02219 Methylenetetrahydrofolate reductase LQS91_14370 PF04452 RNA methyltransferase LQS91_14375 PF00563 EAL domain LQS91_14375 PF00990 Diguanylate cyclase, GGDEF domain LQS91_14375 PF03707 Bacterial signalling protein N terminal repeat LQS91_14380 PF00390 Malic enzyme, N-terminal domain LQS91_14380 PF03949 Malic enzyme, NAD binding domain LQS91_14380 PF01515 Phosphate acetyl/butaryl transferase LQS91_14385 PF01743 Poly A polymerase head domain LQS91_14385 PF12627 Probable RNA and SrmB- binding site of polymerase A LQS91_14390 PF13180 PDZ domain LQS91_14395 PF01784 NIF3 (NGG1p interacting factor 3) LQS91_14400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LQS91_14400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LQS91_14435 PF01040 UbiA prenyltransferase family LQS91_14440 PF04345 Chorismate lyase LQS91_14445 PF00120 Glutamine synthetase, catalytic domain LQS91_14445 PF03951 Glutamine synthetase, beta-Grasp domain LQS91_14450 PF00854 POT family LQS91_14460 PF00117 Glutamine amidotransferase class-I LQS91_14470 PF00593 TonB dependent receptor LQS91_14470 PF07715 TonB-dependent Receptor Plug Domain LQS91_14475 PF02885 Glycosyl transferase family, helical bundle domain LQS91_14475 PF00591 Glycosyl transferase family, a/b domain LQS91_14480 PF00218 Indole-3-glycerol phosphate synthase LQS91_14495 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LQS91_14495 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LQS91_14500 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_14500 PF01799 [2Fe-2S] binding domain LQS91_14505 PF01227 GTP cyclohydrolase I LQS91_14515 PF00144 Beta-lactamase LQS91_14530 PF05675 Protein of unknown function (DUF817) LQS91_14535 PF01208 Uroporphyrinogen decarboxylase (URO-D) LQS91_14545 PF00425 chorismate binding enzyme LQS91_14555 PF00975 Thioesterase domain LQS91_14560 PF00005 ABC transporter LQS91_14565 PF00664 ABC transporter transmembrane region LQS91_14565 PF00005 ABC transporter LQS91_14575 PF00282 Pyridoxal-dependent decarboxylase conserved domain LQS91_14580 PF00857 Isochorismatase family LQS91_14580 PF00550 Phosphopantetheine attachment site LQS91_14585 PF00501 AMP-binding enzyme LQS91_14585 PF13193 AMP-binding enzyme C-terminal domain LQS91_14590 PF00501 AMP-binding enzyme LQS91_14590 PF00668 Condensation domain LQS91_14590 PF00550 Phosphopantetheine attachment site LQS91_14595 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LQS91_14600 PF07715 TonB-dependent Receptor Plug Domain LQS91_14600 PF00593 TonB dependent receptor LQS91_14605 PF01497 Periplasmic binding protein LQS91_14610 PF00005 ABC transporter LQS91_14615 PF01032 FecCD transport family LQS91_14620 PF01032 FecCD transport family LQS91_14625 PF00550 Phosphopantetheine attachment site LQS91_14625 PF00668 Condensation domain LQS91_14625 PF13193 AMP-binding enzyme C-terminal domain LQS91_14625 PF00975 Thioesterase domain LQS91_14625 PF00501 AMP-binding enzyme LQS91_14630 PF00501 AMP-binding enzyme LQS91_14630 PF13193 AMP-binding enzyme C-terminal domain LQS91_14630 PF00668 Condensation domain LQS91_14630 PF00550 Phosphopantetheine attachment site LQS91_14640 PF08348 YheO-like PAS domain LQS91_14640 PF13309 HTH domain LQS91_14645 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_14650 PF17954 Quercetinase C-terminal cupin domain LQS91_14650 PF02678 Pirin LQS91_14680 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LQS91_14690 PF00892 EamA-like transporter family LQS91_14710 PF01266 FAD dependent oxidoreductase LQS91_14710 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LQS91_14715 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_14715 PF18113 Rubredoxin binding C-terminal domain LQS91_14725 PF00171 Aldehyde dehydrogenase family LQS91_14730 PF00355 Rieske [2Fe-2S] domain LQS91_14730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LQS91_14735 PF02028 BCCT, betaine/carnitine/choline family transporter LQS91_14740 PF02028 BCCT, betaine/carnitine/choline family transporter LQS91_14745 PF00557 Metallopeptidase family M24 LQS91_14750 PF03466 LysR substrate binding domain LQS91_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_14760 PF04328 Selenoprotein, putative LQS91_14765 PF13722 5TM C-terminal transporter carbon starvation CstA LQS91_14765 PF02554 Carbon starvation protein CstA LQS91_14770 PF01132 Elongation factor P (EF-P) OB domain LQS91_14770 PF08207 Elongation factor P (EF-P) KOW-like domain LQS91_14770 PF09285 Elongation factor P, C-terminal LQS91_14775 PF04055 Radical SAM superfamily LQS91_14785 PF12792 CSS motif domain associated with EAL LQS91_14785 PF00563 EAL domain LQS91_14790 PF01197 Ribosomal protein L31 LQS91_14795 PF13593 SBF-like CPA transporter family (DUF4137) LQS91_14800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQS91_14805 PF07690 Major Facilitator Superfamily LQS91_14810 PF13654 AAA domain LQS91_14810 PF05362 Lon protease (S16) C-terminal proteolytic domain LQS91_14815 PF03466 LysR substrate binding domain LQS91_14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_14820 PF01551 Peptidase family M23 LQS91_14820 PF01476 LysM domain LQS91_14825 PF01975 Survival protein SurE LQS91_14840 PF00768 D-alanyl-D-alanine carboxypeptidase LQS91_14840 PF07943 Penicillin-binding protein 5, C-terminal domain LQS91_14845 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_14850 PF13344 Haloacid dehalogenase-like hydrolase LQS91_14850 PF00293 NUDIX domain LQS91_14860 PF04356 Protein of unknown function (DUF489) LQS91_14865 PF08328 Adenylosuccinate lyase C-terminal LQS91_14865 PF00206 Lyase LQS91_14880 PF01343 Peptidase family S49 LQS91_14880 PF08496 Peptidase family S49 N-terminal LQS91_14885 PF00005 ABC transporter LQS91_14890 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_14895 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_14900 PF12849 PBP superfamily domain LQS91_14905 PF00324 Amino acid permease LQS91_14910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LQS91_14910 PF00205 Thiamine pyrophosphate enzyme, central domain LQS91_14910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LQS91_14915 PF01037 Lrp/AsnC ligand binding domain LQS91_14920 PF00171 Aldehyde dehydrogenase family LQS91_14925 PF00282 Pyridoxal-dependent decarboxylase conserved domain LQS91_14930 PF00202 Aminotransferase class-III LQS91_14940 PF00440 Bacterial regulatory proteins, tetR family LQS91_14940 PF17754 MftR C-terminal domain LQS91_14950 PF00487 Fatty acid desaturase LQS91_14955 PF00111 2Fe-2S iron-sulfur cluster binding domain LQS91_14955 PF00970 Oxidoreductase FAD-binding domain LQS91_14955 PF00175 Oxidoreductase NAD-binding domain LQS91_14960 PF00440 Bacterial regulatory proteins, tetR family LQS91_14970 PF12137 RNA polymerase recycling family C-terminal LQS91_14970 PF00176 SNF2 family N-terminal domain LQS91_14970 PF18339 RapA N-terminal Tudor like domain 1 LQS91_14970 PF18337 RapA N-terminal Tudor like domain LQS91_14970 PF00271 Helicase conserved C-terminal domain LQS91_14975 PF00849 RNA pseudouridylate synthase LQS91_14985 PF00202 Aminotransferase class-III LQS91_14990 PF02581 Thiamine monophosphate synthase LQS91_15000 PF09615 CRISPR-associated protein (Cas_Csy3) LQS91_15005 PF09614 CRISPR-associated protein (Cas_Csy2) LQS91_15010 PF09611 CRISPR-associated protein (Cas_Csy1) LQS91_15020 PF01867 CRISPR associated protein Cas1 LQS91_15045 PF05193 Peptidase M16 inactive domain LQS91_15045 PF00675 Insulinase (Peptidase family M16) LQS91_15050 PF02567 Phenazine biosynthesis-like protein LQS91_15055 PF00375 Sodium:dicarboxylate symporter family LQS91_15060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_15060 PF03466 LysR substrate binding domain LQS91_15065 PF06779 Uncharacterised MFS-type transporter YbfB LQS91_15080 PF00180 Isocitrate/isopropylmalate dehydrogenase LQS91_15085 PF00849 RNA pseudouridylate synthase LQS91_15090 PF03971 Monomeric isocitrate dehydrogenase LQS91_15100 PF07943 Penicillin-binding protein 5, C-terminal domain LQS91_15100 PF00768 D-alanyl-D-alanine carboxypeptidase LQS91_15105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_15110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LQS91_15115 PF00875 DNA photolyase LQS91_15115 PF03441 FAD binding domain of DNA photolyase LQS91_15145 PF02350 UDP-N-acetylglucosamine 2-epimerase LQS91_15160 PF03060 Nitronate monooxygenase LQS91_15165 PF01207 Dihydrouridine synthase (Dus) LQS91_15170 PF07759 Protein of unknown function (DUF1615) LQS91_15180 PF00696 Amino acid kinase family LQS91_15180 PF01472 PUA domain LQS91_15185 PF01018 GTP1/OBG LQS91_15185 PF01926 50S ribosome-binding GTPase LQS91_15200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LQS91_15200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LQS91_15205 PF00892 EamA-like transporter family LQS91_15215 PF17757 UvrB interaction domain LQS91_15215 PF12344 Ultra-violet resistance protein B LQS91_15215 PF00271 Helicase conserved C-terminal domain LQS91_15215 PF04851 Type III restriction enzyme, res subunit LQS91_15215 PF02151 UvrB/uvrC motif LQS91_15225 PF17151 Periplasmic sensor domain LQS91_15225 PF00990 Diguanylate cyclase, GGDEF domain LQS91_15235 PF00155 Aminotransferase class I and II LQS91_15265 PF00106 short chain dehydrogenase LQS91_15270 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LQS91_15275 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LQS91_15280 PF11967 Recombination protein O N terminal LQS91_15280 PF02565 Recombination protein O C terminal LQS91_15290 PF07650 KH domain LQS91_15290 PF01926 50S ribosome-binding GTPase LQS91_15295 PF00035 Double-stranded RNA binding motif LQS91_15295 PF14622 Ribonuclease-III-like LQS91_15305 PF10502 Signal peptidase, peptidase S26 LQS91_15310 PF00679 Elongation factor G C-terminus LQS91_15310 PF00009 Elongation factor Tu GTP binding domain LQS91_15310 PF03144 Elongation factor Tu domain 2 LQS91_15310 PF06421 GTP-binding protein LepA C-terminus LQS91_15320 PF13180 PDZ domain LQS91_15325 PF00890 FAD binding domain LQS91_15325 PF02910 Fumarate reductase flavoprotein C-term LQS91_15335 PF02223 Thymidylate kinase LQS91_15340 PF02618 YceG-like family LQS91_15345 PF01063 Amino-transferase class IV LQS91_15360 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_15365 PF00528 Binding-protein-dependent transport system inner membrane component LQS91_15370 PF00005 ABC transporter LQS91_15370 PF12857 TOBE-like domain LQS91_15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_15375 PF03466 LysR substrate binding domain LQS91_15385 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_15385 PF14602 Hexapeptide repeat of succinyl-transferase LQS91_15385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LQS91_15395 PF06508 Queuosine biosynthesis protein QueC LQS91_15410 PF00578 AhpC/TSA family LQS91_15420 PF00293 NUDIX domain LQS91_15420 PF01467 Cytidylyltransferase-like LQS91_15425 PF00378 Enoyl-CoA hydratase/isomerase LQS91_15430 PF01784 NIF3 (NGG1p interacting factor 3) LQS91_15435 PF07690 Major Facilitator Superfamily LQS91_15440 PF02769 AIR synthase related protein, C-terminal domain LQS91_15440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LQS91_15440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LQS91_15445 PF01966 HD domain LQS91_15450 PF07499 RuvA, C-terminal domain LQS91_15450 PF01330 RuvA N terminal domain LQS91_15455 PF17864 RuvB AAA lid domain LQS91_15455 PF05491 RuvB C-terminal winged helix domain LQS91_15455 PF05496 Holliday junction DNA helicase RuvB P-loop domain LQS91_15460 PF01546 Peptidase family M20/M25/M40 LQS91_15460 PF07687 Peptidase dimerisation domain LQS91_15465 PF03061 Thioesterase superfamily LQS91_15470 PF01618 MotA/TolQ/ExbB proton channel family LQS91_15475 PF02472 Biopolymer transport protein ExbD/TolR LQS91_15485 PF04052 TolB amino-terminal domain LQS91_15485 PF07676 WD40-like Beta Propeller Repeat LQS91_15490 PF00691 OmpA family LQS91_15500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LQS91_15505 PF00588 SpoU rRNA Methylase family LQS91_15505 PF08032 RNA 2'-O ribose methyltransferase substrate binding LQS91_15535 PF00308 Bacterial dnaA protein LQS91_15535 PF08299 Bacterial dnaA protein helix-turn-helix LQS91_15535 PF11638 DnaA N-terminal domain LQS91_15540 PF01594 AI-2E family transporter LQS91_15545 PF02769 AIR synthase related protein, C-terminal domain LQS91_15545 PF00586 AIR synthase related protein, N-terminal domain LQS91_15550 PF00551 Formyl transferase LQS91_15555 PF12697 Alpha/beta hydrolase family LQS91_15560 PF06965 Na+/H+ antiporter 1 LQS91_15560 PF01343 Peptidase family S49 LQS91_15570 PF03772 Competence protein LQS91_15570 PF13567 Domain of unknown function (DUF4131) LQS91_15570 PF00753 Metallo-beta-lactamase superfamily LQS91_15575 PF00005 ABC transporter LQS91_15580 PF12704 MacB-like periplasmic core domain LQS91_15580 PF02687 FtsX-like permease family LQS91_15590 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LQS91_15610 PF00266 Aminotransferase class-V LQS91_15620 PF13533 Biotin-lipoyl like LQS91_15640 PF00535 Glycosyl transferase family 2 LQS91_15655 PF03989 DNA gyrase C-terminal domain, beta-propeller LQS91_15655 PF00521 DNA gyrase/topoisomerase IV, subunit A LQS91_15660 PF01012 Electron transfer flavoprotein domain LQS91_15660 PF00766 Electron transfer flavoprotein FAD-binding domain LQS91_15665 PF01012 Electron transfer flavoprotein domain LQS91_15670 PF02899 Phage integrase, N-terminal SAM-like domain LQS91_15670 PF00589 Phage integrase family LQS91_15675 PF01810 LysE type translocator LQS91_15680 PF00561 alpha/beta hydrolase fold LQS91_15685 PF01678 Diaminopimelate epimerase LQS91_15690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LQS91_15690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LQS91_15700 PF00324 Amino acid permease LQS91_15705 PF18073 Rubredoxin metal binding domain LQS91_15715 PF00152 tRNA synthetases class II (D, K and N) LQS91_15720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQS91_15720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQS91_15720 PF11890 Domain of unknown function (DUF3410) LQS91_15725 PF06803 Protein of unknown function (DUF1232) LQS91_15730 PF02634 FdhD/NarQ family LQS91_15735 PF00384 Molybdopterin oxidoreductase LQS91_15740 PF02595 Glycerate kinase family LQS91_15755 PF00881 Nitroreductase family LQS91_15790 PF00975 Thioesterase domain LQS91_15790 PF13193 AMP-binding enzyme C-terminal domain LQS91_15790 PF00501 AMP-binding enzyme LQS91_15790 PF00668 Condensation domain LQS91_15790 PF00550 Phosphopantetheine attachment site LQS91_15805 PF03449 Transcription elongation factor, N-terminal LQS91_15805 PF01272 Transcription elongation factor, GreA/GreB, C-term LQS91_15810 PF00497 Bacterial extracellular solute-binding proteins, family 3 LQS91_15810 PF01464 Transglycosylase SLT domain LQS91_15820 PF01171 PP-loop family LQS91_15825 PF01464 Transglycosylase SLT domain LQS91_15830 PF01435 Peptidase family M48 LQS91_15840 PF00873 AcrB/AcrD/AcrF family LQS91_15845 PF03009 Glycerophosphoryl diester phosphodiesterase family LQS91_15850 PF00753 Metallo-beta-lactamase superfamily LQS91_15855 PF01219 Prokaryotic diacylglycerol kinase LQS91_15860 PF00118 TCP-1/cpn60 chaperonin family LQS91_15865 PF00166 Chaperonin 10 Kd subunit LQS91_15875 PF00149 Calcineurin-like phosphoesterase LQS91_15880 PF00781 Diacylglycerol kinase catalytic domain LQS91_15885 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LQS91_15885 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LQS91_15890 PF01266 FAD dependent oxidoreductase LQS91_15890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LQS91_15895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LQS91_15895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LQS91_15900 PF00083 Sugar (and other) transporter LQS91_15915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LQS91_15915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LQS91_15930 PF09423 PhoD-like phosphatase LQS91_15930 PF16655 PhoD-like phosphatase, N-terminal domain LQS91_15950 PF00809 Pterin binding enzyme LQS91_15955 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_15955 PF17862 AAA+ lid domain LQS91_15955 PF06480 FtsH Extracellular LQS91_15955 PF01434 Peptidase family M41 LQS91_15960 PF01728 FtsJ-like methyltransferase LQS91_15965 PF01985 CRS1 / YhbY (CRM) domain LQS91_15980 PF00117 Glutamine amidotransferase class-I LQS91_15980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LQS91_15985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQS91_15985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LQS91_15985 PF02142 MGS-like domain LQS91_15990 PF01272 Transcription elongation factor, GreA/GreB, C-term LQS91_15990 PF03449 Transcription elongation factor, N-terminal LQS91_15995 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_16000 PF00582 Universal stress protein family LQS91_16005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LQS91_16015 PF09587 Bacterial capsule synthesis protein PGA_cap LQS91_16030 PF00999 Sodium/hydrogen exchanger family LQS91_16035 PF04228 Putative neutral zinc metallopeptidase LQS91_16040 PF05661 Protein of unknown function (DUF808) LQS91_16045 PF00579 tRNA synthetases class I (W and Y) LQS91_16060 PF02629 CoA binding domain LQS91_16060 PF00549 CoA-ligase LQS91_16065 PF00549 CoA-ligase LQS91_16065 PF08442 ATP-grasp domain LQS91_16070 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_16070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQS91_16075 PF00364 Biotin-requiring enzyme LQS91_16075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQS91_16075 PF02817 e3 binding domain LQS91_16080 PF16870 2-oxoglutarate dehydrogenase C-terminal LQS91_16080 PF02779 Transketolase, pyrimidine binding domain LQS91_16080 PF16078 2-oxoglutarate dehydrogenase N-terminus LQS91_16080 PF00676 Dehydrogenase E1 component LQS91_16095 PF13085 2Fe-2S iron-sulfur cluster binding domain LQS91_16100 PF00890 FAD binding domain LQS91_16100 PF02910 Fumarate reductase flavoprotein C-term LQS91_16105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQS91_16110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LQS91_16115 PF00285 Citrate synthase, C-terminal domain LQS91_16125 PF00581 Rhodanese-like domain LQS91_16125 PF17773 UPF0176 acylphosphatase like domain LQS91_16140 PF04545 Sigma-70, region 4 LQS91_16140 PF04546 Sigma-70, non-essential region LQS91_16140 PF03979 Sigma-70 factor, region 1.1 LQS91_16140 PF00140 Sigma-70 factor, region 1.2 LQS91_16140 PF04542 Sigma-70 region 2 LQS91_16140 PF04539 Sigma-70 region 3 LQS91_16145 PF04359 Protein of unknown function (DUF493) LQS91_16150 PF03099 Biotin/lipoate A/B protein ligase family LQS91_16160 PF00465 Iron-containing alcohol dehydrogenase LQS91_16165 PF13520 Amino acid permease LQS91_16170 PF03358 NADPH-dependent FMN reductase LQS91_16175 PF01638 HxlR-like helix-turn-helix LQS91_16180 PF00588 SpoU rRNA Methylase family LQS91_16185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LQS91_16185 PF14824 Sirohaem biosynthesis protein central LQS91_16185 PF10414 Sirohaem synthase dimerisation region LQS91_16190 PF02403 Seryl-tRNA synthetase N-terminal domain LQS91_16190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQS91_16200 PF03548 Outer membrane lipoprotein carrier protein LolA LQS91_16205 PF01016 Ribosomal L27 protein LQS91_16210 PF00829 Ribosomal prokaryotic L21 protein LQS91_16220 PF00348 Polyprenyl synthetase LQS91_16230 PF01569 PAP2 superfamily LQS91_16235 PF00529 HlyD membrane-fusion protein of T1SS LQS91_16235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQS91_16240 PF00873 AcrB/AcrD/AcrF family LQS91_16245 PF02321 Outer membrane efflux protein LQS91_16250 PF01906 Putative heavy-metal-binding LQS91_16255 PF01906 Putative heavy-metal-binding LQS91_16275 PF08264 Anticodon-binding domain of tRNA LQS91_16275 PF00133 tRNA synthetases class I (I, L, M and V) LQS91_16275 PF10458 Valyl tRNA synthetase tRNA binding arm LQS91_16295 PF03466 LysR substrate binding domain LQS91_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_16300 PF00909 Ammonium Transporter Family LQS91_16310 PF08521 Two-component sensor kinase N-terminal LQS91_16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_16310 PF00512 His Kinase A (phospho-acceptor) domain LQS91_16315 PF00072 Response regulator receiver domain LQS91_16315 PF00486 Transcriptional regulatory protein, C terminal LQS91_16320 PF08019 Phosphoethanolamine transferase EptA/EptB LQS91_16320 PF00884 Sulfatase LQS91_16340 PF01734 Patatin-like phospholipase LQS91_16350 PF01145 SPFH domain / Band 7 family LQS91_16355 PF04237 YjbR LQS91_16360 PF00348 Polyprenyl synthetase LQS91_16365 PF04303 PrpF protein LQS91_16370 PF00324 Amino acid permease LQS91_16430 PF01464 Transglycosylase SLT domain LQS91_16430 PF10145 Phage-related minor tail protein LQS91_16430 PF01551 Peptidase family M23 LQS91_16485 PF00574 Clp protease LQS91_16490 PF04860 Phage portal protein LQS91_16495 PF03354 Phage Terminase LQS91_16550 PF05866 Endodeoxyribonuclease RusA LQS91_16575 PF03796 DnaB-like helicase C terminal domain LQS91_16575 PF00772 DnaB-like helicase N terminal domain LQS91_16610 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT LQS91_16615 PF01726 LexA DNA binding domain LQS91_16615 PF00717 Peptidase S24-like LQS91_16660 PF01965 DJ-1/PfpI family LQS91_16665 PF00550 Phosphopantetheine attachment site LQS91_16665 PF14765 Polyketide synthase dehydratase LQS91_16665 PF08659 KR domain LQS91_16665 PF02801 Beta-ketoacyl synthase, C-terminal domain LQS91_16665 PF00109 Beta-ketoacyl synthase, N-terminal domain LQS91_16665 PF16197 Ketoacyl-synthetase C-terminal extension LQS91_16665 PF09277 Erythronolide synthase, docking LQS91_16665 PF08990 Erythronolide synthase docking LQS91_16665 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_16665 PF00698 Acyl transferase domain LQS91_16670 PF06719 AraC-type transcriptional regulator N-terminus LQS91_16670 PF12833 Helix-turn-helix domain LQS91_16675 PF02673 Bacitracin resistance protein BacA LQS91_16695 PF02525 Flavodoxin-like fold LQS91_16710 PF01507 Phosphoadenosine phosphosulfate reductase family LQS91_16715 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LQS91_16715 PF06974 Protein of unknown function (DUF1298) LQS91_16725 PF10150 Ribonuclease E/G family LQS91_16725 PF00575 S1 RNA binding domain LQS91_16730 PF02545 Maf-like protein LQS91_16735 PF04093 rod shape-determining protein MreD LQS91_16740 PF04085 rod shape-determining protein MreC LQS91_16750 PF02686 Glu-tRNAGln amidotransferase C subunit LQS91_16755 PF01425 Amidase LQS91_16760 PF02637 GatB domain LQS91_16760 PF02934 GatB/GatE catalytic domain LQS91_16785 PF05992 SbmA/BacA-like family LQS91_16790 PF13291 ACT domain LQS91_16790 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_16795 PF01734 Patatin-like phospholipase LQS91_16800 PF01235 Sodium:alanine symporter family LQS91_16815 PF00881 Nitroreductase family LQS91_16820 PF07690 Major Facilitator Superfamily LQS91_16825 PF12805 FUSC-like inner membrane protein yccS LQS91_16835 PF00667 FAD binding domain LQS91_16835 PF00258 Flavodoxin LQS91_16835 PF00175 Oxidoreductase NAD-binding domain LQS91_16875 PF17969 L,D-transpeptidase C-terminal domain LQS91_16875 PF03734 L,D-transpeptidase catalytic domain LQS91_16880 PF04304 Protein of unknown function (DUF454) LQS91_16890 PF08085 Entericidin EcnA/B family LQS91_16895 PF07687 Peptidase dimerisation domain LQS91_16895 PF01546 Peptidase family M20/M25/M40 LQS91_16905 PF06969 HemN C-terminal domain LQS91_16905 PF04055 Radical SAM superfamily LQS91_16915 PF01584 CheW-like domain LQS91_16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_16915 PF01627 Hpt domain LQS91_16915 PF00072 Response regulator receiver domain LQS91_16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LQS91_16920 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LQS91_16925 PF01584 CheW-like domain LQS91_16930 PF00072 Response regulator receiver domain LQS91_16935 PF00072 Response regulator receiver domain LQS91_16950 PF00873 AcrB/AcrD/AcrF family LQS91_16955 PF04073 Aminoacyl-tRNA editing domain LQS91_16955 PF03129 Anticodon binding domain LQS91_16955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LQS91_16960 PF07411 Domain of unknown function (DUF1508) LQS91_16965 PF03831 PhnA domain LQS91_16965 PF08274 PhnA Zinc-Ribbon LQS91_16970 PF04343 Protein of unknown function, DUF488 LQS91_16980 PF01571 Aminomethyltransferase folate-binding domain LQS91_16985 PF13098 Thioredoxin-like domain LQS91_16985 PF10411 Disulfide bond isomerase protein N-terminus LQS91_16995 PF03547 Membrane transport protein LQS91_17000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_17005 PF00593 TonB dependent receptor LQS91_17005 PF07715 TonB-dependent Receptor Plug Domain LQS91_17010 PF02245 Methylpurine-DNA glycosylase (MPG) LQS91_17015 PF06827 Zinc finger found in FPG and IleRS LQS91_17015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LQS91_17015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LQS91_17030 PF01741 Large-conductance mechanosensitive channel, MscL LQS91_17035 PF00679 Elongation factor G C-terminus LQS91_17035 PF03144 Elongation factor Tu domain 2 LQS91_17035 PF00009 Elongation factor Tu GTP binding domain LQS91_17040 PF00860 Permease family LQS91_17045 PF08468 Methyltransferase small domain N-terminal LQS91_17045 PF05175 Methyltransferase small domain LQS91_17050 PF00324 Amino acid permease LQS91_17055 PF01139 tRNA-splicing ligase RtcB LQS91_17065 PF13505 Outer membrane protein beta-barrel domain LQS91_17065 PF00691 OmpA family LQS91_17085 PF00893 Small Multidrug Resistance protein LQS91_17095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LQS91_17095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LQS91_17100 PF01011 PQQ enzyme repeat LQS91_17105 PF04966 Carbohydrate-selective porin, OprB family LQS91_17110 PF02515 CoA-transferase family III LQS91_17115 PF12833 Helix-turn-helix domain LQS91_17115 PF02311 AraC-like ligand binding domain LQS91_17120 PF02803 Thiolase, C-terminal domain LQS91_17120 PF00108 Thiolase, N-terminal domain LQS91_17125 PF00378 Enoyl-CoA hydratase/isomerase LQS91_17125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LQS91_17125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LQS91_17140 PF13673 Acetyltransferase (GNAT) domain LQS91_17150 PF03006 Haemolysin-III related LQS91_17155 PF07690 Major Facilitator Superfamily LQS91_17155 PF00083 Sugar (and other) transporter LQS91_17165 PF02810 SEC-C motif LQS91_17165 PF07516 SecA Wing and Scaffold domain LQS91_17165 PF01043 SecA preprotein cross-linking domain LQS91_17165 PF07517 SecA DEAD-like domain LQS91_17170 PF00578 AhpC/TSA family LQS91_17170 PF10417 C-terminal domain of 1-Cys peroxiredoxin LQS91_17175 PF00753 Metallo-beta-lactamase superfamily LQS91_17190 PF02875 Mur ligase family, glutamate ligase domain LQS91_17190 PF08245 Mur ligase middle domain LQS91_17195 PF01039 Carboxyl transferase domain LQS91_17200 PF00290 Tryptophan synthase alpha chain LQS91_17225 PF00291 Pyridoxal-phosphate dependent enzyme LQS91_17230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LQS91_17235 PF00593 TonB dependent receptor LQS91_17235 PF07715 TonB-dependent Receptor Plug Domain LQS91_17240 PF01923 Cobalamin adenosyltransferase LQS91_17260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LQS91_17265 PF00072 Response regulator receiver domain LQS91_17265 PF00486 Transcriptional regulatory protein, C terminal LQS91_17270 PF00672 HAMP domain LQS91_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_17270 PF00512 His Kinase A (phospho-acceptor) domain LQS91_17280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_17280 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQS91_17280 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_17280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_17285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_17285 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQS91_17285 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_17285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_17290 PF06146 Phosphate-starvation-inducible E LQS91_17310 PF07715 TonB-dependent Receptor Plug Domain LQS91_17310 PF00593 TonB dependent receptor LQS91_17320 PF02938 GAD domain LQS91_17320 PF00152 tRNA synthetases class II (D, K and N) LQS91_17320 PF01336 OB-fold nucleic acid binding domain LQS91_17325 PF17101 Stealth protein CR1, conserved region 1 LQS91_17325 PF11380 Stealth protein CR2, conserved region 2 LQS91_17325 PF17102 Stealth protein CR3, conserved region 3 LQS91_17350 PF13439 Glycosyltransferase Family 4 LQS91_17350 PF00534 Glycosyl transferases group 1 LQS91_17355 PF00535 Glycosyl transferase family 2 LQS91_17360 PF01522 Polysaccharide deacetylase LQS91_17375 PF01063 Amino-transferase class IV LQS91_17380 PF08335 GlnD PII-uridylyltransferase LQS91_17380 PF03710 Glutamate-ammonia ligase adenylyltransferase LQS91_17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_17385 PF07689 KaiB domain LQS91_17385 PF00512 His Kinase A (phospho-acceptor) domain LQS91_17395 PF02547 Queuosine biosynthesis protein LQS91_17410 PF01702 Queuine tRNA-ribosyltransferase LQS91_17415 PF02699 Preprotein translocase subunit LQS91_17420 PF07549 SecD/SecF GG Motif LQS91_17420 PF13721 SecD export protein N-terminal TM region LQS91_17420 PF02355 Protein export membrane protein LQS91_17425 PF07549 SecD/SecF GG Motif LQS91_17425 PF02355 Protein export membrane protein LQS91_17430 PF02441 Flavoprotein LQS91_17430 PF04127 DNA / pantothenate metabolism flavoprotein LQS91_17435 PF04002 RadC-like JAB domain LQS91_17440 PF01062 Bestrophin, RFP-TM, chloride channel LQS91_17445 PF02811 PHP domain LQS91_17450 PF04279 Intracellular septation protein A LQS91_17455 PF03795 YCII-related domain LQS91_17465 PF01266 FAD dependent oxidoreductase LQS91_17465 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LQS91_17475 PF04461 Protein of unknown function (DUF520) LQS91_17485 PF03061 Thioesterase superfamily LQS91_17490 PF00085 Thioredoxin LQS91_17495 PF00561 alpha/beta hydrolase fold LQS91_17500 PF04273 Putative phosphatase (DUF442) LQS91_17500 PF00753 Metallo-beta-lactamase superfamily LQS91_17510 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_17510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LQS91_17545 PF17152 Periplasmic sensor domain LQS91_17545 PF00990 Diguanylate cyclase, GGDEF domain LQS91_17550 PF00691 OmpA family LQS91_17550 PF01389 OmpA-like transmembrane domain LQS91_17555 PF10518 TAT (twin-arginine translocation) pathway signal sequence LQS91_17555 PF00149 Calcineurin-like phosphoesterase LQS91_17560 PF13091 PLD-like domain LQS91_17570 PF16360 GTP-binding GTPase Middle Region LQS91_17570 PF13167 GTP-binding GTPase N-terminal LQS91_17570 PF01926 50S ribosome-binding GTPase LQS91_17590 PF00149 Calcineurin-like phosphoesterase LQS91_17595 PF00398 Ribosomal RNA adenine dimethylase LQS91_17600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LQS91_17605 PF00572 Ribosomal protein L13 LQS91_17610 PF00380 Ribosomal protein S9/S16 LQS91_17615 PF00043 Glutathione S-transferase, C-terminal domain LQS91_17615 PF13417 Glutathione S-transferase, N-terminal domain LQS91_17620 PF04386 Stringent starvation protein B LQS91_17630 PF00289 Biotin carboxylase, N-terminal domain LQS91_17630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LQS91_17630 PF00364 Biotin-requiring enzyme LQS91_17630 PF02785 Biotin carboxylase C-terminal domain LQS91_17640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_17640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_17640 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_17645 PF01039 Carboxyl transferase domain LQS91_17660 PF17932 Tetracyclin repressor-like, C-terminal domain LQS91_17660 PF00440 Bacterial regulatory proteins, tetR family LQS91_17665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_17665 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_17665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_17710 PF01066 CDP-alcohol phosphatidyltransferase LQS91_17715 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LQS91_17735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LQS91_17735 PF00056 lactate/malate dehydrogenase, NAD binding domain LQS91_17745 PF01464 Transglycosylase SLT domain LQS91_17745 PF10145 Phage-related minor tail protein LQS91_17745 PF01551 Peptidase family M23 LQS91_17750 PF04055 Radical SAM superfamily LQS91_17750 PF01938 TRAM domain LQS91_17750 PF00919 Uncharacterized protein family UPF0004 LQS91_17755 PF02562 PhoH-like protein LQS91_17760 PF02130 Uncharacterized protein family UPF0054 LQS91_17785 PF03358 NADPH-dependent FMN reductase LQS91_17790 PF03631 Virulence factor BrkB LQS91_17795 PF00892 EamA-like transporter family LQS91_17800 PF12833 Helix-turn-helix domain LQS91_17805 PF01557 Fumarylacetoacetate (FAA) hydrolase family LQS91_17850 PF08206 Ribonuclease B OB domain LQS91_17850 PF08461 Ribonuclease R winged-helix domain LQS91_17850 PF17876 Cold shock domain LQS91_17850 PF00773 RNB domain LQS91_17850 PF00575 S1 RNA binding domain LQS91_17855 PF01432 Peptidase family M3 LQS91_17860 PF09526 Probable metal-binding protein (DUF2387) LQS91_17890 PF03937 Flavinator of succinate dehydrogenase LQS91_17895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_17895 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_17895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_17900 PF00743 Flavin-binding monooxygenase-like LQS91_17905 PF01196 Ribosomal protein L17 LQS91_17910 PF01000 RNA polymerase Rpb3/RpoA insert domain LQS91_17910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LQS91_17910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LQS91_17915 PF00163 Ribosomal protein S4/S9 N-terminal domain LQS91_17915 PF01479 S4 domain LQS91_17920 PF00411 Ribosomal protein S11 LQS91_17925 PF00416 Ribosomal protein S13/S18 LQS91_17930 PF00444 Ribosomal protein L36 LQS91_17935 PF00344 SecY translocase LQS91_17940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LQS91_17945 PF00327 Ribosomal protein L30p/L7e LQS91_17950 PF00333 Ribosomal protein S5, N-terminal domain LQS91_17950 PF03719 Ribosomal protein S5, C-terminal domain LQS91_17955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LQS91_17960 PF00347 Ribosomal protein L6 LQS91_17965 PF00410 Ribosomal protein S8 LQS91_17970 PF00253 Ribosomal protein S14p/S29e LQS91_17975 PF00673 ribosomal L5P family C-terminus LQS91_17975 PF00281 Ribosomal protein L5 LQS91_17980 PF00467 KOW motif LQS91_17980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LQS91_17985 PF00238 Ribosomal protein L14p/L23e LQS91_17990 PF00366 Ribosomal protein S17 LQS91_17995 PF00831 Ribosomal L29 protein LQS91_18000 PF00252 Ribosomal protein L16p/L10e LQS91_18010 PF00237 Ribosomal protein L22p/L17e LQS91_18015 PF00203 Ribosomal protein S19 LQS91_18020 PF00181 Ribosomal Proteins L2, RNA binding domain LQS91_18020 PF03947 Ribosomal Proteins L2, C-terminal domain LQS91_18025 PF00276 Ribosomal protein L23 LQS91_18030 PF00573 Ribosomal protein L4/L1 family LQS91_18035 PF00297 Ribosomal protein L3 LQS91_18040 PF00338 Ribosomal protein S10p/S20e LQS91_18045 PF00117 Glutamine amidotransferase class-I LQS91_18050 PF01053 Cys/Met metabolism PLP-dependent enzyme LQS91_18055 PF05872 Bacterial protein of unknown function (DUF853) LQS91_18060 PF00970 Oxidoreductase FAD-binding domain LQS91_18060 PF00042 Globin LQS91_18060 PF00175 Oxidoreductase NAD-binding domain LQS91_18065 PF02082 Transcriptional regulator LQS91_18070 PF01926 50S ribosome-binding GTPase LQS91_18080 PF00375 Sodium:dicarboxylate symporter family LQS91_18090 PF01553 Acyltransferase LQS91_18105 PF00271 Helicase conserved C-terminal domain LQS91_18105 PF17191 RecG wedge domain LQS91_18105 PF00270 DEAD/DEAH box helicase LQS91_18110 PF00156 Phosphoribosyl transferase domain LQS91_18115 PF00293 NUDIX domain LQS91_18120 PF03641 Possible lysine decarboxylase LQS91_18125 PF01544 CorA-like Mg2+ transporter protein LQS91_18135 PF05494 MlaC protein LQS91_18145 PF02405 Permease MlaE LQS91_18150 PF00005 ABC transporter LQS91_18160 PF00271 Helicase conserved C-terminal domain LQS91_18160 PF12343 Cold shock protein DEAD box A LQS91_18160 PF03880 DbpA RNA binding domain LQS91_18160 PF00270 DEAD/DEAH box helicase LQS91_18165 PF00459 Inositol monophosphatase family LQS91_18170 PF02779 Transketolase, pyrimidine binding domain LQS91_18170 PF02780 Transketolase, C-terminal domain LQS91_18170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LQS91_18175 PF00925 GTP cyclohydrolase II LQS91_18180 PF01218 Coproporphyrinogen III oxidase LQS91_18185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LQS91_18185 PF01488 Shikimate / quinate 5-dehydrogenase LQS91_18185 PF08501 Shikimate dehydrogenase substrate binding domain LQS91_18195 PF12806 Acetyl-CoA dehydrogenase C-terminal like LQS91_18195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LQS91_18195 PF02770 Acyl-CoA dehydrogenase, middle domain LQS91_18195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LQS91_18205 PF04024 PspC domain LQS91_18210 PF00571 CBS domain LQS91_18225 PF07690 Major Facilitator Superfamily LQS91_18230 PF02091 Glycyl-tRNA synthetase alpha subunit LQS91_18235 PF02092 Glycyl-tRNA synthetase beta subunit LQS91_18235 PF05746 DALR anticodon binding domain LQS91_18255 PF00892 EamA-like transporter family LQS91_18260 PF03466 LysR substrate binding domain LQS91_18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_18275 PF05922 Peptidase inhibitor I9 LQS91_18275 PF00082 Subtilase family LQS91_18290 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LQS91_18295 PF04996 Succinylarginine dihydrolase LQS91_18300 PF00171 Aldehyde dehydrogenase family LQS91_18305 PF04958 Arginine N-succinyltransferase beta subunit LQS91_18310 PF00202 Aminotransferase class-III LQS91_18315 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LQS91_18315 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LQS91_18320 PF00324 Amino acid permease LQS91_18330 PF08241 Methyltransferase domain LQS91_18350 PF13614 AAA domain LQS91_18355 PF01594 AI-2E family transporter LQS91_18360 PF00080 Copper/zinc superoxide dismutase (SODC) LQS91_18365 PF12805 FUSC-like inner membrane protein yccS LQS91_18370 PF07690 Major Facilitator Superfamily LQS91_18380 PF02525 Flavodoxin-like fold LQS91_18385 PF03992 Antibiotic biosynthesis monooxygenase LQS91_18395 PF02913 FAD linked oxidases, C-terminal domain LQS91_18395 PF01565 FAD binding domain LQS91_18400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LQS91_18400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LQS91_18405 PF00892 EamA-like transporter family LQS91_18410 PF00892 EamA-like transporter family LQS91_18420 PF01925 Sulfite exporter TauE/SafE LQS91_18425 PF09157 Pseudouridine synthase II TruB, C-terminal LQS91_18425 PF16198 tRNA pseudouridylate synthase B C-terminal domain LQS91_18425 PF01509 TruB family pseudouridylate synthase (N terminal domain) LQS91_18430 PF03280 Proteobacterial lipase chaperone protein LQS91_18435 PF00561 alpha/beta hydrolase fold LQS91_18440 PF01245 Ribosomal protein L19 LQS91_18445 PF01746 tRNA (Guanine-1)-methyltransferase LQS91_18450 PF01782 RimM N-terminal domain LQS91_18450 PF05239 PRC-barrel domain LQS91_18455 PF00886 Ribosomal protein S16 LQS91_18495 PF02401 LytB protein LQS91_18500 PF00625 Guanylate kinase LQS91_18505 PF01192 RNA polymerase Rpb6 LQS91_18515 PF13291 ACT domain LQS91_18515 PF04607 Region found in RelA / SpoT proteins LQS91_18515 PF02824 TGS domain LQS91_18520 PF01042 Endoribonuclease L-PSP LQS91_18525 PF04324 BFD-like [2Fe-2S] binding domain LQS91_18530 PF00210 Ferritin-like domain LQS91_18535 PF04932 O-Antigen ligase LQS91_18535 PF11846 Virulence factor membrane-bound polymerase, C-terminal LQS91_18535 PF15864 Protein glycosylation ligase LQS91_18540 PF07963 Prokaryotic N-terminal methylation motif LQS91_18540 PF00114 Pilin (bacterial filament) LQS91_18550 PF04536 TPM domain LQS91_18555 PF04011 LemA family LQS91_18565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LQS91_18565 PF07992 Pyridine nucleotide-disulphide oxidoreductase LQS91_18570 PF01645 Conserved region in glutamate synthase LQS91_18570 PF04898 Glutamate synthase central domain LQS91_18570 PF00310 Glutamine amidotransferases class-II LQS91_18570 PF01493 GXGXG motif LQS91_18580 PF01761 3-dehydroquinate synthase LQS91_18585 PF01202 Shikimate kinase LQS91_18590 PF00263 Bacterial type II and III secretion system protein LQS91_18590 PF03958 Bacterial type II/III secretion system short domain LQS91_18590 PF07660 Secretin and TonB N terminus short domain LQS91_18590 PF11741 AMIN domain LQS91_18600 PF04350 Pilus assembly protein, PilO LQS91_18605 PF05137 Fimbrial assembly protein (PilN) LQS91_18610 PF11104 Type IV pilus assembly protein PilM; LQS91_18615 PF00912 Transglycosylase LQS91_18615 PF00905 Penicillin binding protein transpeptidase domain LQS91_18615 PF17092 Penicillin-binding protein OB-like domain LQS91_18620 PF13847 Methyltransferase domain LQS91_18630 PF00953 Glycosyl transferase family 4 LQS91_18635 PF08245 Mur ligase middle domain LQS91_18635 PF01225 Mur ligase family, catalytic domain LQS91_18635 PF02875 Mur ligase family, glutamate ligase domain LQS91_18640 PF01225 Mur ligase family, catalytic domain LQS91_18640 PF02875 Mur ligase family, glutamate ligase domain LQS91_18640 PF08245 Mur ligase middle domain LQS91_18645 PF03717 Penicillin-binding Protein dimerisation domain LQS91_18645 PF00905 Penicillin binding protein transpeptidase domain LQS91_18655 PF01795 MraW methylase family LQS91_18670 PF00749 tRNA synthetases class I (E and Q), catalytic domain LQS91_18685 PF00324 Amino acid permease LQS91_18715 PF01545 Cation efflux family LQS91_18720 PF00873 AcrB/AcrD/AcrF family LQS91_18725 PF00529 HlyD membrane-fusion protein of T1SS LQS91_18725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQS91_18750 PF00005 ABC transporter LQS91_18750 PF12848 ABC transporter LQS91_18755 PF01053 Cys/Met metabolism PLP-dependent enzyme LQS91_18760 PF00106 short chain dehydrogenase LQS91_18765 PF00916 Sulfate permease family LQS91_18765 PF01740 STAS domain LQS91_18770 PF17674 HHH domain LQS91_18770 PF00575 S1 RNA binding domain LQS91_18770 PF09371 Tex-like protein N-terminal domain LQS91_18770 PF16921 Tex protein YqgF-like domain LQS91_18775 PF00486 Transcriptional regulatory protein, C terminal LQS91_18775 PF00072 Response regulator receiver domain LQS91_18780 PF00512 His Kinase A (phospho-acceptor) domain LQS91_18780 PF00672 HAMP domain LQS91_18780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_18790 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LQS91_18790 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LQS91_18795 PF00583 Acetyltransferase (GNAT) family LQS91_18815 PF00475 Imidazoleglycerol-phosphate dehydratase LQS91_18820 PF00117 Glutamine amidotransferase class-I LQS91_18835 PF00977 Histidine biosynthesis protein LQS91_18860 PF01636 Phosphotransferase enzyme family LQS91_18865 PF00977 Histidine biosynthesis protein LQS91_18880 PF00230 Major intrinsic protein LQS91_18910 PF02705 K+ potassium transporter LQS91_18920 PF13302 Acetyltransferase (GNAT) domain LQS91_18930 PF02525 Flavodoxin-like fold LQS91_18935 PF01638 HxlR-like helix-turn-helix LQS91_18950 PF01638 HxlR-like helix-turn-helix LQS91_18965 PF02311 AraC-like ligand binding domain LQS91_18965 PF12833 Helix-turn-helix domain LQS91_18970 PF00248 Aldo/keto reductase family LQS91_18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_18990 PF03466 LysR substrate binding domain LQS91_18995 PF07690 Major Facilitator Superfamily LQS91_19015 PF01593 Flavin containing amine oxidoreductase LQS91_19020 PF05726 Pirin C-terminal cupin domain LQS91_19020 PF02678 Pirin LQS91_19025 PF00857 Isochorismatase family LQS91_19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_19035 PF00171 Aldehyde dehydrogenase family LQS91_19040 PF00202 Aminotransferase class-III LQS91_19045 PF00155 Aminotransferase class I and II LQS91_19045 PF00392 Bacterial regulatory proteins, gntR family LQS91_19050 PF00324 Amino acid permease LQS91_19060 PF03591 AzlC protein LQS91_19070 PF00436 Single-strand binding protein family LQS91_19075 PF07690 Major Facilitator Superfamily LQS91_19085 PF08543 Phosphomethylpyrimidine kinase LQS91_19085 PF03070 TENA/THI-4/PQQC family LQS91_19085 PF02581 Thiamine monophosphate synthase LQS91_19090 PF06942 GlpM protein LQS91_19100 PF00107 Zinc-binding dehydrogenase LQS91_19100 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_19105 PF16925 Tetracyclin repressor-like, C-terminal domain LQS91_19105 PF00440 Bacterial regulatory proteins, tetR family LQS91_19110 PF00005 ABC transporter LQS91_19110 PF17755 UvrA DNA-binding domain LQS91_19110 PF17760 UvrA interaction domain LQS91_19115 PF00990 Diguanylate cyclase, GGDEF domain LQS91_19125 PF02028 BCCT, betaine/carnitine/choline family transporter LQS91_19135 PF00474 Sodium:solute symporter family LQS91_19140 PF04341 Protein of unknown function, DUF485 LQS91_19145 PF00672 HAMP domain LQS91_19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_19145 PF00512 His Kinase A (phospho-acceptor) domain LQS91_19145 PF01627 Hpt domain LQS91_19145 PF00072 Response regulator receiver domain LQS91_19155 PF00072 Response regulator receiver domain LQS91_19155 PF00196 Bacterial regulatory proteins, luxR family LQS91_19160 PF03358 NADPH-dependent FMN reductase LQS91_19165 PF00296 Luciferase-like monooxygenase LQS91_19170 PF01037 Lrp/AsnC ligand binding domain LQS91_19175 PF00857 Isochorismatase family LQS91_19180 PF16177 Acetyl-coenzyme A synthetase N-terminus LQS91_19180 PF00501 AMP-binding enzyme LQS91_19180 PF13193 AMP-binding enzyme C-terminal domain LQS91_19190 PF00924 Mechanosensitive ion channel LQS91_19195 PF04452 RNA methyltransferase LQS91_19200 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LQS91_19205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LQS91_19225 PF01368 DHH family LQS91_19225 PF02272 DHHA1 domain LQS91_19225 PF17768 RecJ OB domain LQS91_19230 PF01243 Pyridoxamine 5'-phosphate oxidase LQS91_19230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LQS91_19235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQS91_19235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQS91_19235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQS91_19235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQS91_19240 PF00571 CBS domain LQS91_19240 PF00478 IMP dehydrogenase / GMP reductase domain LQS91_19245 PF03692 Putative zinc- or iron-chelating domain LQS91_19250 PF01613 Flavin reductase like domain LQS91_19250 PF00258 Flavodoxin LQS91_19255 PF07715 TonB-dependent Receptor Plug Domain LQS91_19255 PF00593 TonB dependent receptor LQS91_19260 PF01169 Uncharacterized protein family UPF0016 LQS91_19270 PF00364 Biotin-requiring enzyme LQS91_19270 PF02817 e3 binding domain LQS91_19270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LQS91_19275 PF17831 Pyruvate dehydrogenase E1 component middle domain LQS91_19275 PF00456 Transketolase, thiamine diphosphate binding domain LQS91_19280 PF01551 Peptidase family M23 LQS91_19290 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LQS91_19295 PF12327 FtsZ family, C-terminal domain LQS91_19295 PF00091 Tubulin/FtsZ family, GTPase domain LQS91_19300 PF02491 SHS2 domain inserted in FTSA LQS91_19305 PF08478 POTRA domain, FtsQ-type LQS91_19305 PF03799 Cell division protein FtsQ LQS91_19310 PF01820 D-ala D-ala ligase N-terminus LQS91_19310 PF07478 D-ala D-ala ligase C-terminus LQS91_19315 PF02875 Mur ligase family, glutamate ligase domain LQS91_19315 PF08245 Mur ligase middle domain LQS91_19315 PF01225 Mur ligase family, catalytic domain LQS91_19320 PF04101 Glycosyltransferase family 28 C-terminal domain LQS91_19320 PF03033 Glycosyltransferase family 28 N-terminal domain LQS91_19325 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LQS91_19325 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LQS91_19335 PF07715 TonB-dependent Receptor Plug Domain LQS91_19335 PF00593 TonB dependent receptor LQS91_19340 PF00156 Phosphoribosyl transferase domain LQS91_19345 PF03372 Endonuclease/Exonuclease/phosphatase family LQS91_19350 PF03960 ArsC family LQS91_19360 PF07859 alpha/beta hydrolase fold LQS91_19365 PF07694 5TMR of 5TMR-LYT LQS91_19365 PF00990 Diguanylate cyclase, GGDEF domain LQS91_19370 PF11412 Disulphide bond corrector protein DsbC LQS91_19370 PF02683 Cytochrome C biogenesis protein transmembrane region LQS91_19400 PF00576 HIUase/Transthyretin family LQS91_19405 PF00860 Permease family LQS91_19415 PF01494 FAD binding domain LQS91_19420 PF03561 Allantoicase repeat LQS91_19425 PF04115 Ureidoglycolate lyase LQS91_19430 PF00986 DNA gyrase B subunit, carboxyl terminus LQS91_19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_19430 PF01751 Toprim domain LQS91_19430 PF00204 DNA gyrase B LQS91_19435 PF05728 Uncharacterised protein family (UPF0227) LQS91_19465 PF01510 N-acetylmuramoyl-L-alanine amidase LQS91_19465 PF01471 Putative peptidoglycan binding domain LQS91_19465 PF01476 LysM domain LQS91_19470 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LQS91_19470 PF04717 Type VI secretion system, phage-baseplate injector LQS91_19470 PF13296 Putative type VI secretion system Rhs element Vgr LQS91_19475 PF02600 Disulfide bond formation protein DsbB LQS91_19480 PF04262 Glutamate-cysteine ligase LQS91_19495 PF04286 Protein of unknown function (DUF445) LQS91_19500 PF00155 Aminotransferase class I and II LQS91_19505 PF01554 MatE LQS91_19510 PF00106 short chain dehydrogenase LQS91_19520 PF00072 Response regulator receiver domain LQS91_19520 PF00486 Transcriptional regulatory protein, C terminal LQS91_19525 PF00512 His Kinase A (phospho-acceptor) domain LQS91_19525 PF00989 PAS fold LQS91_19525 PF11808 Phosphate regulon sensor protein PhoR LQS91_19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LQS91_19535 PF02666 Phosphatidylserine decarboxylase LQS91_19540 PF00581 Rhodanese-like domain LQS91_19545 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LQS91_19545 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LQS91_19550 PF02580 D-Tyr-tRNA(Tyr) deacylase LQS91_19560 PF00905 Penicillin binding protein transpeptidase domain LQS91_19605 PF00925 GTP cyclohydrolase II LQS91_19605 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LQS91_19610 PF00885 6,7-dimethyl-8-ribityllumazine synthase LQS91_19615 PF01029 NusB family LQS91_19620 PF00586 AIR synthase related protein, N-terminal domain LQS91_19620 PF02769 AIR synthase related protein, C-terminal domain LQS91_19625 PF04608 Phosphatidylglycerophosphatase A LQS91_19630 PF00132 Bacterial transferase hexapeptide (six repeats) LQS91_19630 PF14602 Hexapeptide repeat of succinyl-transferase LQS91_19630 PF12804 MobA-like NTP transferase domain LQS91_19635 PF01380 SIS domain LQS91_19640 PF08722 TnsA endonuclease N terminal LQS91_19640 PF08721 TnsA endonuclease C terminal LQS91_19645 PF00665 Integrase core domain LQS91_19650 PF13401 AAA domain LQS91_19650 PF11426 Tn7 transposition regulator TnsC LQS91_19655 PF06527 TniQ LQS91_19655 PF15978 Tn7-like transposition protein D LQS91_19660 PF18623 TnsE C-terminal domain LQS91_19690 PF00583 Acetyltransferase (GNAT) family LQS91_19695 PF00186 Dihydrofolate reductase LQS91_19710 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LQS91_19730 PF02909 Tetracyclin repressor-like, C-terminal domain LQS91_19730 PF00440 Bacterial regulatory proteins, tetR family LQS91_19735 PF07690 Major Facilitator Superfamily LQS91_19740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LQS91_19740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LQS91_19740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LQS91_19740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LQS91_19745 PF00809 Pterin binding enzyme LQS91_19760 PF00665 Integrase core domain LQS91_19785 PF02899 Phage integrase, N-terminal SAM-like domain LQS91_19785 PF00589 Phage integrase family LQS91_19815 PF00916 Sulfate permease family LQS91_19815 PF01740 STAS domain LQS91_19820 PF00582 Universal stress protein family LQS91_19840 PF08676 MutL C terminal dimerisation domain LQS91_19840 PF01119 DNA mismatch repair protein, C-terminal domain LQS91_19845 PF00145 C-5 cytosine-specific DNA methylase LQS91_19860 PF01177 Asp/Glu/Hydantoin racemase LQS91_19875 PF00491 Arginase family LQS91_19880 PF01979 Amidohydrolase family LQS91_19885 PF00324 Amino acid permease LQS91_19890 PF00221 Aromatic amino acid lyase LQS91_19895 PF17391 Urocanase N-terminal domain LQS91_19895 PF17392 Urocanase C-terminal domain LQS91_19895 PF01175 Urocanase Rossmann-like domain LQS91_19900 PF05962 HutD LQS91_19905 PF07702 UTRA domain LQS91_19905 PF00392 Bacterial regulatory proteins, gntR family LQS91_19915 PF07683 Cobalamin synthesis protein cobW C-terminal domain LQS91_19915 PF02492 CobW/HypB/UreG, nucleotide-binding domain LQS91_19925 PF00324 Amino acid permease LQS91_19935 PF02798 Glutathione S-transferase, N-terminal domain LQS91_19935 PF14497 Glutathione S-transferase, C-terminal domain LQS91_19940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQS91_19950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LQS91_19955 PF04463 Protein of unknown function (DUF523) LQS91_19960 PF01554 MatE LQS91_19965 PF01758 Sodium Bile acid symporter family LQS91_19970 PF00857 Isochorismatase family LQS91_19975 PF00701 Dihydrodipicolinate synthetase family LQS91_19985 PF01259 SAICAR synthetase LQS91_19995 PF01226 Formate/nitrite transporter LQS91_20000 PF12002 MgsA AAA+ ATPase C terminal LQS91_20000 PF16193 AAA C-terminal domain LQS91_20000 PF00004 ATPase family associated with various cellular activities (AAA) LQS91_20005 PF07995 Glucose / Sorbosone dehydrogenase LQS91_20010 PF03692 Putative zinc- or iron-chelating domain LQS91_20015 PF07043 Protein of unknown function (DUF1328) LQS91_20030 PF00633 Helix-hairpin-helix motif LQS91_20030 PF00730 HhH-GPD superfamily base excision DNA repair protein LQS91_20030 PF10576 Iron-sulfur binding domain of endonuclease III LQS91_20030 PF14815 NUDIX domain LQS91_20045 PF03352 Methyladenine glycosylase LQS91_20050 PF00107 Zinc-binding dehydrogenase LQS91_20050 PF08240 Alcohol dehydrogenase GroES-like domain LQS91_20055 PF00392 Bacterial regulatory proteins, gntR family LQS91_20055 PF00155 Aminotransferase class I and II LQS91_20070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_20070 PF03466 LysR substrate binding domain LQS91_20075 PF00248 Aldo/keto reductase family LQS91_20080 PF07690 Major Facilitator Superfamily LQS91_20090 PF01113 Dihydrodipicolinate reductase, N-terminus LQS91_20090 PF05173 Dihydrodipicolinate reductase, C-terminus LQS91_20100 PF01556 DnaJ C terminal domain LQS91_20100 PF00684 DnaJ central domain LQS91_20100 PF00226 DnaJ domain LQS91_20110 PF00873 AcrB/AcrD/AcrF family LQS91_20115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LQS91_20120 PF08361 MAATS-type transcriptional repressor, C-terminal region LQS91_20120 PF00440 Bacterial regulatory proteins, tetR family LQS91_20125 PF00311 Phosphoenolpyruvate carboxylase LQS91_20130 PF00860 Permease family LQS91_20135 PF03466 LysR substrate binding domain LQS91_20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LQS91_20150 PF00920 Dehydratase family LQS91_20155 PF02911 Formyl transferase, C-terminal domain LQS91_20155 PF00551 Formyl transferase LQS91_20160 PF01029 NusB family LQS91_20160 PF01189 16S rRNA methyltransferase RsmB/F LQS91_20170 PF00209 Sodium:neurotransmitter symporter family