locus-tag class description MS14413_00002 PF00438 S-adenosylmethionine synthetase, N-terminal domain MS14413_00002 PF02773 S-adenosylmethionine synthetase, C-terminal domain MS14413_00002 PF02772 S-adenosylmethionine synthetase, central domain MS14413_00006 PF00905 Penicillin binding protein transpeptidase domain MS14413_00009 PF02075 Crossover junction endodeoxyribonuclease RuvC MS14413_00010 PF01256 Carbohydrate kinase MS14413_00010 PF03853 YjeF-related protein N-terminus MS14413_00011 PF08331 Domain of unknown function (DUF1730) MS14413_00012 PF06968 Biotin and Thiamin Synthesis associated domain MS14413_00012 PF04055 Radical SAM superfamily MS14413_00015 PF16970 Type-1 fimbrial protein, A MS14413_00016 PF02753 Pili assembly chaperone PapD, C-terminal domain MS14413_00016 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MS14413_00017 PF00577 Outer membrane usher protein MS14413_00017 PF13953 PapC C-terminal domain MS14413_00017 PF13954 PapC N-terminal domain MS14413_00021 PF00892 EamA-like transporter family MS14413_00023 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MS14413_00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00025 PF03466 LysR substrate binding domain MS14413_00030 PF00440 Bacterial regulatory proteins, tetR family MS14413_00032 PF01709 Transcriptional regulator MS14413_00033 PF01037 Lrp/AsnC ligand binding domain MS14413_00035 PF00005 ABC transporter MS14413_00036 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00037 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00042 PF00296 Luciferase-like monooxygenase MS14413_00043 PF03180 NLPA lipoprotein MS14413_00044 PF03180 NLPA lipoprotein MS14413_00045 PF09383 NIL domain MS14413_00045 PF00005 ABC transporter MS14413_00046 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00047 PF01926 50S ribosome-binding GTPase MS14413_00047 PF06071 Protein of unknown function (DUF933) MS14413_00052 PF03591 AzlC protein MS14413_00053 PF05437 Branched-chain amino acid transport protein (AzlD) MS14413_00055 PF02222 ATP-grasp domain MS14413_00056 PF01966 HD domain MS14413_00056 PF01909 Nucleotidyltransferase domain MS14413_00056 PF08335 GlnD PII-uridylyltransferase MS14413_00057 PF00155 Aminotransferase class I and II MS14413_00059 PF12852 Cupin MS14413_00059 PF12833 Helix-turn-helix domain MS14413_00060 PF00255 Glutathione peroxidase MS14413_00061 PF01641 SelR domain MS14413_00062 PF00155 Aminotransferase class I and II MS14413_00063 PF00375 Sodium:dicarboxylate symporter family MS14413_00064 PF00710 Asparaginase, N-terminal MS14413_00064 PF17763 Glutaminase/Asparaginase C-terminal domain MS14413_00065 PF02811 PHP domain MS14413_00065 PF01336 OB-fold nucleic acid binding domain MS14413_00065 PF07733 Bacterial DNA polymerase III alpha NTPase domain MS14413_00065 PF14579 Helix-hairpin-helix motif MS14413_00065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MS14413_00066 PF00588 SpoU rRNA Methylase family MS14413_00067 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00070 PF13192 Thioredoxin domain MS14413_00070 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00073 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00073 PF03466 LysR substrate binding domain MS14413_00074 PF01758 Sodium Bile acid symporter family MS14413_00075 PF01022 Bacterial regulatory protein, arsR family MS14413_00076 PF03960 ArsC family MS14413_00078 PF13382 Adenine deaminase C-terminal domain MS14413_00078 PF01979 Amidohydrolase family MS14413_00080 PF03466 LysR substrate binding domain MS14413_00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00082 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MS14413_00083 PF01177 Asp/Glu/Hydantoin racemase MS14413_00084 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MS14413_00085 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00086 PF00005 ABC transporter MS14413_00087 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MS14413_00090 PF00083 Sugar (and other) transporter MS14413_00091 PF00296 Luciferase-like monooxygenase MS14413_00092 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00092 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00092 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_00094 PF01654 Cytochrome bd terminal oxidase subunit I MS14413_00095 PF02322 Cytochrome bd terminal oxidase subunit II MS14413_00097 PF00155 Aminotransferase class I and II MS14413_00097 PF00392 Bacterial regulatory proteins, gntR family MS14413_00098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00098 PF03466 LysR substrate binding domain MS14413_00101 PF00698 Acyl transferase domain MS14413_00102 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG MS14413_00104 PF01039 Carboxyl transferase domain MS14413_00105 PF06857 Malonate decarboxylase delta subunit (MdcD) MS14413_00106 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase MS14413_00107 PF16957 Malonate decarboxylase, alpha subunit, transporter MS14413_00108 PF07690 Major Facilitator Superfamily MS14413_00111 PF00155 Aminotransferase class I and II MS14413_00111 PF00392 Bacterial regulatory proteins, gntR family MS14413_00112 PF04172 LrgB-like family MS14413_00113 PF03788 LrgA family MS14413_00114 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00114 PF03466 LysR substrate binding domain MS14413_00115 PF02798 Glutathione S-transferase, N-terminal domain MS14413_00115 PF14834 Glutathione S-transferase, C-terminal domain MS14413_00116 PF02798 Glutathione S-transferase, N-terminal domain MS14413_00117 PF03466 LysR substrate binding domain MS14413_00117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00119 PF00581 Rhodanese-like domain MS14413_00120 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00122 PF00266 Aminotransferase class-V MS14413_00123 PF01810 LysE type translocator MS14413_00124 PF03466 LysR substrate binding domain MS14413_00124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00125 PF00497 Bacterial extracellular solute-binding proteins, family 3 MS14413_00126 PF00497 Bacterial extracellular solute-binding proteins, family 3 MS14413_00127 PF00005 ABC transporter MS14413_00128 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00129 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00131 PF00072 Response regulator receiver domain MS14413_00132 PF00072 Response regulator receiver domain MS14413_00132 PF09308 LuxQ, periplasmic MS14413_00132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_00132 PF00512 His Kinase A (phospho-acceptor) domain MS14413_00134 PF01037 Lrp/AsnC ligand binding domain MS14413_00134 PF13404 AsnC-type helix-turn-helix domain MS14413_00136 PF00717 Peptidase S24-like MS14413_00141 PF00199 Catalase MS14413_00141 PF06628 Catalase-related immune-responsive MS14413_00141 PF18011 C-terminal domain found in long catalases MS14413_00143 PF00994 Probable molybdopterin binding domain MS14413_00143 PF18146 Damage-inducible protein CinA KH domain MS14413_00143 PF02464 Competence-damaged protein MS14413_00151 PF03466 LysR substrate binding domain MS14413_00151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00155 PF00501 AMP-binding enzyme MS14413_00155 PF13193 AMP-binding enzyme C-terminal domain MS14413_00156 PF00440 Bacterial regulatory proteins, tetR family MS14413_00157 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_00157 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00157 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00158 PF01039 Carboxyl transferase domain MS14413_00159 PF00378 Enoyl-CoA hydratase/isomerase MS14413_00160 PF18140 Propionyl-coenzyme A carboxylase BT domain MS14413_00160 PF00364 Biotin-requiring enzyme MS14413_00160 PF00289 Biotin carboxylase, N-terminal domain MS14413_00160 PF02785 Biotin carboxylase C-terminal domain MS14413_00160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MS14413_00161 PF00682 HMGL-like MS14413_00162 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00162 PF03466 LysR substrate binding domain MS14413_00165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00165 PF12806 Acetyl-CoA dehydrogenase C-terminal like MS14413_00165 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_00165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00167 PF07690 Major Facilitator Superfamily MS14413_00169 PF01144 Coenzyme A transferase MS14413_00170 PF01144 Coenzyme A transferase MS14413_00171 PF07690 Major Facilitator Superfamily MS14413_00172 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00172 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00172 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_00173 PF00378 Enoyl-CoA hydratase/isomerase MS14413_00175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MS14413_00175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MS14413_00175 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain MS14413_00176 PF02803 Thiolase, C-terminal domain MS14413_00176 PF00108 Thiolase, N-terminal domain MS14413_00177 PF09339 IclR helix-turn-helix domain MS14413_00178 PF07690 Major Facilitator Superfamily MS14413_00179 PF03060 Nitronate monooxygenase MS14413_00180 PF00378 Enoyl-CoA hydratase/isomerase MS14413_00181 PF09339 IclR helix-turn-helix domain MS14413_00182 PF02515 CoA-transferase family III MS14413_00183 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00183 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_00183 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00184 PF07690 Major Facilitator Superfamily MS14413_00185 PF13419 Haloacid dehalogenase-like hydrolase MS14413_00186 PF00266 Aminotransferase class-V MS14413_00187 PF01266 FAD dependent oxidoreductase MS14413_00188 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00189 PF00005 ABC transporter MS14413_00189 PF08402 TOBE domain MS14413_00191 PF00392 Bacterial regulatory proteins, gntR family MS14413_00191 PF07702 UTRA domain MS14413_00192 PF01494 FAD binding domain MS14413_00193 PF01614 Bacterial transcriptional regulator MS14413_00193 PF09339 IclR helix-turn-helix domain MS14413_00194 PF02525 Flavodoxin-like fold MS14413_00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00195 PF03466 LysR substrate binding domain MS14413_00196 PF02627 Carboxymuconolactone decarboxylase family MS14413_00197 PF00171 Aldehyde dehydrogenase family MS14413_00199 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MS14413_00200 PF00171 Aldehyde dehydrogenase family MS14413_00201 PF00296 Luciferase-like monooxygenase MS14413_00202 PF01613 Flavin reductase like domain MS14413_00203 PF12697 Alpha/beta hydrolase family MS14413_00207 PF01292 Prokaryotic cytochrome b561 MS14413_00208 PF00199 Catalase MS14413_00215 PF03061 Thioesterase superfamily MS14413_00216 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00217 PF08223 PaaX-like protein C-terminal domain MS14413_00217 PF07848 PaaX-like protein MS14413_00218 PF00501 AMP-binding enzyme MS14413_00218 PF14535 AMP-binding enzyme C-terminal domain MS14413_00219 PF00108 Thiolase, N-terminal domain MS14413_00219 PF02803 Thiolase, C-terminal domain MS14413_00220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MS14413_00220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MS14413_00220 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain MS14413_00221 PF00378 Enoyl-CoA hydratase/isomerase MS14413_00222 PF00378 Enoyl-CoA hydratase/isomerase MS14413_00223 PF00970 Oxidoreductase FAD-binding domain MS14413_00223 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_00223 PF00175 Oxidoreductase NAD-binding domain MS14413_00224 PF01883 Iron-sulfur cluster assembly protein MS14413_00225 PF05138 Phenylacetic acid catabolic protein MS14413_00226 PF06243 Phenylacetic acid degradation B MS14413_00227 PF05138 Phenylacetic acid catabolic protein MS14413_00228 PF00171 Aldehyde dehydrogenase family MS14413_00228 PF01575 MaoC like domain MS14413_00229 PF03313 Serine dehydratase alpha chain MS14413_00229 PF03315 Serine dehydratase beta chain MS14413_00230 PF13520 Amino acid permease MS14413_00231 PF00171 Aldehyde dehydrogenase family MS14413_00232 PF00083 Sugar (and other) transporter MS14413_00234 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00234 PF04324 BFD-like [2Fe-2S] binding domain MS14413_00236 PF01266 FAD dependent oxidoreductase MS14413_00237 PF05544 Proline racemase MS14413_00238 PF00392 Bacterial regulatory proteins, gntR family MS14413_00240 PF00701 Dihydrodipicolinate synthetase family MS14413_00243 PF00376 MerR family regulatory protein MS14413_00243 PF09278 MerR, DNA binding MS14413_00247 PF02677 Epoxyqueuosine reductase QueH MS14413_00250 PF07690 Major Facilitator Superfamily MS14413_00251 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MS14413_00253 PF03466 LysR substrate binding domain MS14413_00253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00259 PF17871 AAA lid domain MS14413_00259 PF10431 C-terminal, D2-small domain, of ClpB protein MS14413_00259 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_00259 PF07724 AAA domain (Cdc48 subfamily) MS14413_00261 PF00691 OmpA family MS14413_00261 PF01389 OmpA-like transmembrane domain MS14413_00274 PF00005 ABC transporter MS14413_00275 PF00497 Bacterial extracellular solute-binding proteins, family 3 MS14413_00276 PF01425 Amidase MS14413_00277 PF08753 NikR C terminal nickel binding domain MS14413_00277 PF01402 Ribbon-helix-helix protein, copG family MS14413_00280 PF01638 HxlR-like helix-turn-helix MS14413_00281 PF02525 Flavodoxin-like fold MS14413_00282 PF00289 Biotin carboxylase, N-terminal domain MS14413_00282 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MS14413_00282 PF02785 Biotin carboxylase C-terminal domain MS14413_00285 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_00285 PF13823 Alcohol dehydrogenase GroES-associated MS14413_00285 PF00107 Zinc-binding dehydrogenase MS14413_00287 PF00440 Bacterial regulatory proteins, tetR family MS14413_00292 PF00654 Voltage gated chloride channel MS14413_00293 PF02785 Biotin carboxylase C-terminal domain MS14413_00293 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MS14413_00293 PF00364 Biotin-requiring enzyme MS14413_00293 PF00289 Biotin carboxylase, N-terminal domain MS14413_00295 PF07286 Protein of unknown function (DUF1445) MS14413_00296 PF03746 LamB/YcsF family MS14413_00297 PF01566 Natural resistance-associated macrophage protein MS14413_00298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00298 PF03466 LysR substrate binding domain MS14413_00301 PF14220 Domain of unknown function (DUF4329) MS14413_00301 PF03527 RHS protein MS14413_00301 PF05593 RHS Repeat MS14413_00302 PF16671 Actin cross-linking domain MS14413_00302 PF04717 Type VI secretion system, phage-baseplate injector MS14413_00303 PF13936 Helix-turn-helix domain MS14413_00303 PF00665 Integrase core domain MS14413_00305 PF13419 Haloacid dehalogenase-like hydrolase MS14413_00308 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MS14413_00308 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MS14413_00312 PF07690 Major Facilitator Superfamily MS14413_00314 PF03279 Bacterial lipid A biosynthesis acyltransferase MS14413_00315 PF00563 EAL domain MS14413_00315 PF03707 Bacterial signalling protein N terminal repeat MS14413_00315 PF00990 Diguanylate cyclase, GGDEF domain MS14413_00316 PF00892 EamA-like transporter family MS14413_00317 PF01037 Lrp/AsnC ligand binding domain MS14413_00318 PF05190 MutS family domain IV MS14413_00318 PF05192 MutS domain III MS14413_00318 PF05188 MutS domain II MS14413_00318 PF01624 MutS domain I MS14413_00318 PF00488 MutS domain V MS14413_00320 PF00037 4Fe-4S binding domain MS14413_00320 PF11953 Domain of unknown function (DUF3470) MS14413_00322 PF01596 O-methyltransferase MS14413_00324 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00325 PF01205 Uncharacterized protein family UPF0029 MS14413_00327 PF03412 Peptidase C39 family MS14413_00327 PF00664 ABC transporter transmembrane region MS14413_00327 PF00005 ABC transporter MS14413_00328 PF02321 Outer membrane efflux protein MS14413_00329 PF00005 ABC transporter MS14413_00329 PF12399 Branched-chain amino acid ATP-binding cassette transporter MS14413_00330 PF03968 OstA-like protein MS14413_00333 PF01380 SIS domain MS14413_00333 PF00571 CBS domain MS14413_00334 PF09190 DALR domain MS14413_00334 PF01406 tRNA synthetases class I (C) catalytic domain MS14413_00340 PF01638 HxlR-like helix-turn-helix MS14413_00341 PF07690 Major Facilitator Superfamily MS14413_00346 PF03807 NADP oxidoreductase coenzyme F420-dependent MS14413_00346 PF14748 Pyrroline-5-carboxylate reductase dimerisation MS14413_00348 PF00313 'Cold-shock' DNA-binding domain MS14413_00349 PF01810 LysE type translocator MS14413_00356 PF13742 OB-fold nucleic acid binding domain MS14413_00356 PF02601 Exonuclease VII, large subunit MS14413_00363 PF00376 MerR family regulatory protein MS14413_00363 PF09278 MerR, DNA binding MS14413_00364 PF00403 Heavy-metal-associated domain MS14413_00366 PF03466 LysR substrate binding domain MS14413_00366 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00369 PF00866 Ring hydroxylating beta subunit MS14413_00370 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_00370 PF00175 Oxidoreductase NAD-binding domain MS14413_00370 PF00970 Oxidoreductase FAD-binding domain MS14413_00371 PF00106 short chain dehydrogenase MS14413_00372 PF03594 Benzoate membrane transport protein MS14413_00373 PF07690 Major Facilitator Superfamily MS14413_00375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MS14413_00375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MS14413_00376 PF00270 DEAD/DEAH box helicase MS14413_00376 PF04408 Helicase associated domain (HA2) MS14413_00376 PF11898 Domain of unknown function (DUF3418) MS14413_00376 PF00271 Helicase conserved C-terminal domain MS14413_00376 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MS14413_00377 PF00578 AhpC/TSA family MS14413_00377 PF10417 C-terminal domain of 1-Cys peroxiredoxin MS14413_00383 PF13192 Thioredoxin domain MS14413_00383 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00385 PF02798 Glutathione S-transferase, N-terminal domain MS14413_00385 PF00043 Glutathione S-transferase, C-terminal domain MS14413_00387 PF02390 Putative methyltransferase MS14413_00388 PF13417 Glutathione S-transferase, N-terminal domain MS14413_00388 PF00043 Glutathione S-transferase, C-terminal domain MS14413_00390 PF13488 Glycine zipper MS14413_00390 PF00691 OmpA family MS14413_00391 PF01979 Amidohydrolase family MS14413_00392 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MS14413_00392 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MS14413_00394 PF01170 Putative RNA methylase family UPF0020 MS14413_00394 PF02926 THUMP domain MS14413_00394 PF10672 S-adenosylmethionine-dependent methyltransferase MS14413_00397 PF07724 AAA domain (Cdc48 subfamily) MS14413_00397 PF10431 C-terminal, D2-small domain, of ClpB protein MS14413_00397 PF17871 AAA lid domain MS14413_00397 PF02861 Clp amino terminal domain, pathogenicity island component MS14413_00397 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_00400 PF02566 OsmC-like protein MS14413_00403 PF00027 Cyclic nucleotide-binding domain MS14413_00403 PF13545 Crp-like helix-turn-helix domain MS14413_00406 PF00248 Aldo/keto reductase family MS14413_00409 PF00709 Adenylosuccinate synthetase MS14413_00410 PF13393 Histidyl-tRNA synthetase MS14413_00411 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MS14413_00411 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MS14413_00412 PF01411 tRNA synthetases class II (A) MS14413_00412 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MS14413_00412 PF02272 DHHA1 domain MS14413_00413 PF00696 Amino acid kinase family MS14413_00413 PF13840 ACT domain MS14413_00413 PF01842 ACT domain MS14413_00414 PF02599 Global regulator protein family MS14413_00415 PF01351 Ribonuclease HII MS14413_00417 PF01292 Prokaryotic cytochrome b561 MS14413_00418 PF00962 Adenosine/AMP deaminase MS14413_00419 PF00860 Permease family MS14413_00420 PF13610 DDE domain MS14413_00422 PF00106 short chain dehydrogenase MS14413_00423 PF00743 Flavin-binding monooxygenase-like MS14413_00425 PF13610 DDE domain MS14413_00426 PF07995 Glucose / Sorbosone dehydrogenase MS14413_00427 PF00892 EamA-like transporter family MS14413_00428 PF01177 Asp/Glu/Hydantoin racemase MS14413_00430 PF02470 MlaD protein MS14413_00431 PF04403 Paraquat-inducible protein A MS14413_00433 PF06826 Predicted Permease Membrane Region MS14413_00433 PF02080 TrkA-C domain MS14413_00434 PF00155 Aminotransferase class I and II MS14413_00437 PF08946 Osmosensory transporter coiled coil MS14413_00437 PF00083 Sugar (and other) transporter MS14413_00445 PF13936 Helix-turn-helix domain MS14413_00445 PF00665 Integrase core domain MS14413_00448 PF07729 FCD domain MS14413_00448 PF00392 Bacterial regulatory proteins, gntR family MS14413_00450 PF03616 Sodium/glutamate symporter MS14413_00451 PF00561 alpha/beta hydrolase fold MS14413_00456 PF04076 Bacterial OB fold (BOF) protein MS14413_00462 PF00324 Amino acid permease MS14413_00463 PF00171 Aldehyde dehydrogenase family MS14413_00464 PF00202 Aminotransferase class-III MS14413_00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00465 PF03466 LysR substrate binding domain MS14413_00470 PF00069 Protein kinase domain MS14413_00474 PF00814 Glycoprotease family MS14413_00475 PF01165 Ribosomal protein S21 MS14413_00476 PF09424 Yqey-like protein MS14413_00477 PF01435 Peptidase family M48 MS14413_00478 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MS14413_00478 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MS14413_00481 PF00156 Phosphoribosyl transferase domain MS14413_00482 PF02674 Colicin V production protein MS14413_00483 PF01180 Dihydroorotate dehydrogenase MS14413_00487 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MS14413_00487 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MS14413_00488 PF00881 Nitroreductase family MS14413_00490 PF00270 DEAD/DEAH box helicase MS14413_00490 PF00271 Helicase conserved C-terminal domain MS14413_00491 PF00313 'Cold-shock' DNA-binding domain MS14413_00493 PF04545 Sigma-70, region 4 MS14413_00493 PF00140 Sigma-70 factor, region 1.2 MS14413_00493 PF04542 Sigma-70 region 2 MS14413_00494 PF04241 Protein of unknown function (DUF423) MS14413_00496 PF05690 Thiazole biosynthesis protein ThiG MS14413_00498 PF03883 Peroxide stress protein YaaA MS14413_00500 PF12706 Beta-lactamase superfamily domain MS14413_00501 PF01546 Peptidase family M20/M25/M40 MS14413_00501 PF07687 Peptidase dimerisation domain MS14413_00503 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MS14413_00504 PF01817 Chorismate mutase type II MS14413_00504 PF00800 Prephenate dehydratase MS14413_00504 PF01842 ACT domain MS14413_00505 PF00756 Putative esterase MS14413_00506 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00506 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00506 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_00507 PF00375 Sodium:dicarboxylate symporter family MS14413_00508 PF00591 Glycosyl transferase family, a/b domain MS14413_00508 PF02885 Glycosyl transferase family, helical bundle domain MS14413_00509 PF07023 Protein of unknown function (DUF1315) MS14413_00510 PF01513 ATP-NAD kinase MS14413_00511 PF00912 Transglycosylase MS14413_00511 PF14814 Bifunctional transglycosylase second domain MS14413_00511 PF00905 Penicillin binding protein transpeptidase domain MS14413_00513 PF00293 NUDIX domain MS14413_00515 PF00512 His Kinase A (phospho-acceptor) domain MS14413_00515 PF08521 Two-component sensor kinase N-terminal MS14413_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_00516 PF00072 Response regulator receiver domain MS14413_00516 PF00486 Transcriptional regulatory protein, C terminal MS14413_00518 PF00437 Type II/IV secretion system protein MS14413_00520 PF18389 TrmO C-terminal domain MS14413_00520 PF01980 tRNA-methyltransferase O MS14413_00521 PF00175 Oxidoreductase NAD-binding domain MS14413_00521 PF00970 Oxidoreductase FAD-binding domain MS14413_00522 PF02567 Phenazine biosynthesis-like protein MS14413_00523 PF00155 Aminotransferase class I and II MS14413_00523 PF00392 Bacterial regulatory proteins, gntR family MS14413_00525 PF00037 4Fe-4S binding domain MS14413_00526 PF00893 Small Multidrug Resistance protein MS14413_00527 PF00005 ABC transporter MS14413_00528 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00529 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00530 PF00497 Bacterial extracellular solute-binding proteins, family 3 MS14413_00531 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00531 PF03466 LysR substrate binding domain MS14413_00532 PF13533 Biotin-lipoyl like MS14413_00533 PF00873 AcrB/AcrD/AcrF family MS14413_00534 PF02321 Outer membrane efflux protein MS14413_00535 PF00464 Serine hydroxymethyltransferase MS14413_00541 PF00005 ABC transporter MS14413_00542 PF01061 ABC-2 type transporter MS14413_00543 PF14489 QueF-like protein MS14413_00543 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MS14413_00545 PF01098 Cell cycle protein MS14413_00546 PF13406 Transglycosylase SLT domain MS14413_00547 PF03330 Lytic transglycolase MS14413_00547 PF05036 Sporulation related domain MS14413_00551 PF12833 Helix-turn-helix domain MS14413_00553 PF00889 Elongation factor TS MS14413_00554 PF00318 Ribosomal protein S2 MS14413_00555 PF00557 Metallopeptidase family M24 MS14413_00557 PF07690 Major Facilitator Superfamily MS14413_00560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MS14413_00560 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00561 PF04055 Radical SAM superfamily MS14413_00562 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_00562 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_00562 PF09317 Domain of unknown function (DUF1974) MS14413_00565 PF05221 S-adenosyl-L-homocysteine hydrolase MS14413_00565 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MS14413_00566 PF02219 Methylenetetrahydrofolate reductase MS14413_00567 PF04452 RNA methyltransferase MS14413_00568 PF00990 Diguanylate cyclase, GGDEF domain MS14413_00568 PF00563 EAL domain MS14413_00568 PF03707 Bacterial signalling protein N terminal repeat MS14413_00569 PF01515 Phosphate acetyl/butaryl transferase MS14413_00569 PF03949 Malic enzyme, NAD binding domain MS14413_00569 PF00390 Malic enzyme, N-terminal domain MS14413_00570 PF01743 Poly A polymerase head domain MS14413_00570 PF12627 Probable RNA and SrmB- binding site of polymerase A MS14413_00571 PF13180 PDZ domain MS14413_00572 PF01784 NIF3 (NGG1p interacting factor 3) MS14413_00573 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MS14413_00573 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MS14413_00580 PF01040 UbiA prenyltransferase family MS14413_00581 PF04345 Chorismate lyase MS14413_00582 PF00120 Glutamine synthetase, catalytic domain MS14413_00582 PF03951 Glutamine synthetase, beta-Grasp domain MS14413_00583 PF00854 POT family MS14413_00585 PF13356 Arm DNA-binding domain MS14413_00585 PF00589 Phage integrase family MS14413_00656 PF00117 Glutamine amidotransferase class-I MS14413_00657 PF11838 ERAP1-like C-terminal domain MS14413_00657 PF01433 Peptidase family M1 domain MS14413_00658 PF00593 TonB dependent receptor MS14413_00658 PF07715 TonB-dependent Receptor Plug Domain MS14413_00659 PF02885 Glycosyl transferase family, helical bundle domain MS14413_00659 PF00591 Glycosyl transferase family, a/b domain MS14413_00660 PF00218 Indole-3-glycerol phosphate synthase MS14413_00663 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MS14413_00663 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MS14413_00664 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_00664 PF01799 [2Fe-2S] binding domain MS14413_00668 PF00144 Beta-lactamase MS14413_00671 PF05675 Protein of unknown function (DUF817) MS14413_00672 PF01208 Uroporphyrinogen decarboxylase (URO-D) MS14413_00674 PF00425 chorismate binding enzyme MS14413_00676 PF00975 Thioesterase domain MS14413_00677 PF00005 ABC transporter MS14413_00677 PF00664 ABC transporter transmembrane region MS14413_00678 PF00005 ABC transporter MS14413_00678 PF00664 ABC transporter transmembrane region MS14413_00680 PF00282 Pyridoxal-dependent decarboxylase conserved domain MS14413_00681 PF00857 Isochorismatase family MS14413_00681 PF00550 Phosphopantetheine attachment site MS14413_00682 PF13193 AMP-binding enzyme C-terminal domain MS14413_00682 PF00501 AMP-binding enzyme MS14413_00683 PF00668 Condensation domain MS14413_00683 PF00501 AMP-binding enzyme MS14413_00683 PF00550 Phosphopantetheine attachment site MS14413_00684 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) MS14413_00685 PF07715 TonB-dependent Receptor Plug Domain MS14413_00685 PF00593 TonB dependent receptor MS14413_00686 PF01497 Periplasmic binding protein MS14413_00687 PF00005 ABC transporter MS14413_00688 PF01032 FecCD transport family MS14413_00689 PF01032 FecCD transport family MS14413_00692 PF00501 AMP-binding enzyme MS14413_00692 PF13193 AMP-binding enzyme C-terminal domain MS14413_00692 PF00668 Condensation domain MS14413_00692 PF00550 Phosphopantetheine attachment site MS14413_00692 PF00975 Thioesterase domain MS14413_00693 PF00501 AMP-binding enzyme MS14413_00693 PF13193 AMP-binding enzyme C-terminal domain MS14413_00693 PF00550 Phosphopantetheine attachment site MS14413_00693 PF00668 Condensation domain MS14413_00695 PF08348 YheO-like PAS domain MS14413_00695 PF13309 HTH domain MS14413_00696 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_00697 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_00698 PF17954 Quercetinase C-terminal cupin domain MS14413_00698 PF02678 Pirin MS14413_00701 PF00440 Bacterial regulatory proteins, tetR family MS14413_00702 PF14765 Polyketide synthase dehydratase MS14413_00702 PF09277 Erythronolide synthase, docking MS14413_00702 PF16197 Ketoacyl-synthetase C-terminal extension MS14413_00702 PF00698 Acyl transferase domain MS14413_00702 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_00702 PF00109 Beta-ketoacyl synthase, N-terminal domain MS14413_00702 PF02801 Beta-ketoacyl synthase, C-terminal domain MS14413_00702 PF08659 KR domain MS14413_00702 PF00550 Phosphopantetheine attachment site MS14413_00702 PF08990 Erythronolide synthase docking MS14413_00703 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MS14413_00703 PF13378 Enolase C-terminal domain-like MS14413_00704 PF00083 Sugar (and other) transporter MS14413_00705 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system MS14413_00707 PF00892 EamA-like transporter family MS14413_00711 PF01266 FAD dependent oxidoreductase MS14413_00711 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MS14413_00712 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00712 PF18113 Rubredoxin binding C-terminal domain MS14413_00713 PF00171 Aldehyde dehydrogenase family MS14413_00714 PF00848 Ring hydroxylating alpha subunit (catalytic domain) MS14413_00714 PF00355 Rieske [2Fe-2S] domain MS14413_00715 PF02028 BCCT, betaine/carnitine/choline family transporter MS14413_00716 PF02028 BCCT, betaine/carnitine/choline family transporter MS14413_00717 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00717 PF03466 LysR substrate binding domain MS14413_00718 PF00324 Amino acid permease MS14413_00719 PF00171 Aldehyde dehydrogenase family MS14413_00722 PF06018 CodY GAF-like domain MS14413_00722 PF17853 GGDEF-like domain MS14413_00722 PF13556 PucR C-terminal helix-turn-helix domain MS14413_00729 PF04328 Selenoprotein, putative MS14413_00730 PF13722 5TM C-terminal transporter carbon starvation CstA MS14413_00730 PF02554 Carbon starvation protein CstA MS14413_00731 PF01132 Elongation factor P (EF-P) OB domain MS14413_00731 PF08207 Elongation factor P (EF-P) KOW-like domain MS14413_00731 PF09285 Elongation factor P, C-terminal MS14413_00732 PF04055 Radical SAM superfamily MS14413_00735 PF01197 Ribosomal protein L31 MS14413_00736 PF13593 SBF-like CPA transporter family (DUF4137) MS14413_00737 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MS14413_00738 PF07690 Major Facilitator Superfamily MS14413_00739 PF13654 AAA domain MS14413_00739 PF05362 Lon protease (S16) C-terminal proteolytic domain MS14413_00740 PF03466 LysR substrate binding domain MS14413_00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00741 PF01476 LysM domain MS14413_00741 PF01551 Peptidase family M23 MS14413_00742 PF01975 Survival protein SurE MS14413_00745 PF07943 Penicillin-binding protein 5, C-terminal domain MS14413_00745 PF00768 D-alanyl-D-alanine carboxypeptidase MS14413_00746 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00747 PF00293 NUDIX domain MS14413_00747 PF13344 Haloacid dehalogenase-like hydrolase MS14413_00749 PF04356 Protein of unknown function (DUF489) MS14413_00750 PF00206 Lyase MS14413_00750 PF08328 Adenylosuccinate lyase C-terminal MS14413_00753 PF01343 Peptidase family S49 MS14413_00753 PF08496 Peptidase family S49 N-terminal MS14413_00754 PF00005 ABC transporter MS14413_00755 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00756 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00757 PF12849 PBP superfamily domain MS14413_00758 PF00324 Amino acid permease MS14413_00759 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MS14413_00759 PF00205 Thiamine pyrophosphate enzyme, central domain MS14413_00759 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MS14413_00760 PF01037 Lrp/AsnC ligand binding domain MS14413_00761 PF00171 Aldehyde dehydrogenase family MS14413_00762 PF00282 Pyridoxal-dependent decarboxylase conserved domain MS14413_00763 PF00202 Aminotransferase class-III MS14413_00765 PF17754 MftR C-terminal domain MS14413_00765 PF00440 Bacterial regulatory proteins, tetR family MS14413_00767 PF00487 Fatty acid desaturase MS14413_00768 PF00175 Oxidoreductase NAD-binding domain MS14413_00768 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_00768 PF00970 Oxidoreductase FAD-binding domain MS14413_00769 PF00440 Bacterial regulatory proteins, tetR family MS14413_00771 PF18339 RapA N-terminal Tudor like domain 1 MS14413_00771 PF18337 RapA N-terminal Tudor like domain MS14413_00771 PF00176 SNF2 family N-terminal domain MS14413_00771 PF00271 Helicase conserved C-terminal domain MS14413_00771 PF12137 RNA polymerase recycling family C-terminal MS14413_00772 PF00849 RNA pseudouridylate synthase MS14413_00774 PF00202 Aminotransferase class-III MS14413_00775 PF02581 Thiamine monophosphate synthase MS14413_00780 PF00675 Insulinase (Peptidase family M16) MS14413_00780 PF05193 Peptidase M16 inactive domain MS14413_00781 PF02567 Phenazine biosynthesis-like protein MS14413_00783 PF03466 LysR substrate binding domain MS14413_00783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00784 PF06779 Uncharacterised MFS-type transporter YbfB MS14413_00787 PF00180 Isocitrate/isopropylmalate dehydrogenase MS14413_00788 PF00849 RNA pseudouridylate synthase MS14413_00789 PF03971 Monomeric isocitrate dehydrogenase MS14413_00791 PF00768 D-alanyl-D-alanine carboxypeptidase MS14413_00791 PF07943 Penicillin-binding protein 5, C-terminal domain MS14413_00792 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00793 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MS14413_00794 PF00875 DNA photolyase MS14413_00794 PF03441 FAD binding domain of DNA photolyase MS14413_00800 PF02350 UDP-N-acetylglucosamine 2-epimerase MS14413_00803 PF03060 Nitronate monooxygenase MS14413_00804 PF01207 Dihydrouridine synthase (Dus) MS14413_00805 PF07759 Protein of unknown function (DUF1615) MS14413_00807 PF01472 PUA domain MS14413_00807 PF00696 Amino acid kinase family MS14413_00808 PF01018 GTP1/OBG MS14413_00808 PF01926 50S ribosome-binding GTPase MS14413_00811 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MS14413_00811 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MS14413_00812 PF00892 EamA-like transporter family MS14413_00814 PF17757 UvrB interaction domain MS14413_00814 PF12344 Ultra-violet resistance protein B MS14413_00814 PF00271 Helicase conserved C-terminal domain MS14413_00814 PF02151 UvrB/uvrC motif MS14413_00814 PF04851 Type III restriction enzyme, res subunit MS14413_00816 PF17151 Periplasmic sensor domain MS14413_00816 PF00990 Diguanylate cyclase, GGDEF domain MS14413_00818 PF00155 Aminotransferase class I and II MS14413_00823 PF00106 short chain dehydrogenase MS14413_00824 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MS14413_00825 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MS14413_00826 PF11967 Recombination protein O N terminal MS14413_00826 PF02565 Recombination protein O C terminal MS14413_00828 PF07650 KH domain MS14413_00828 PF01926 50S ribosome-binding GTPase MS14413_00829 PF14622 Ribonuclease-III-like MS14413_00829 PF00035 Double-stranded RNA binding motif MS14413_00831 PF10502 Signal peptidase, peptidase S26 MS14413_00832 PF00679 Elongation factor G C-terminus MS14413_00832 PF00009 Elongation factor Tu GTP binding domain MS14413_00832 PF06421 GTP-binding protein LepA C-terminus MS14413_00832 PF03144 Elongation factor Tu domain 2 MS14413_00834 PF13180 PDZ domain MS14413_00835 PF02910 Fumarate reductase flavoprotein C-term MS14413_00835 PF00890 FAD binding domain MS14413_00837 PF02223 Thymidylate kinase MS14413_00838 PF02618 YceG-like family MS14413_00839 PF01063 Amino-transferase class IV MS14413_00842 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00843 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_00844 PF00005 ABC transporter MS14413_00844 PF12857 TOBE-like domain MS14413_00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_00845 PF03466 LysR substrate binding domain MS14413_00847 PF14602 Hexapeptide repeat of succinyl-transferase MS14413_00847 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MS14413_00847 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00849 PF06508 Queuosine biosynthesis protein QueC MS14413_00852 PF00578 AhpC/TSA family MS14413_00854 PF01467 Cytidylyltransferase-like MS14413_00854 PF00293 NUDIX domain MS14413_00855 PF00378 Enoyl-CoA hydratase/isomerase MS14413_00856 PF01784 NIF3 (NGG1p interacting factor 3) MS14413_00858 PF07690 Major Facilitator Superfamily MS14413_00859 PF02769 AIR synthase related protein, C-terminal domain MS14413_00859 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MS14413_00859 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MS14413_00860 PF01966 HD domain MS14413_00861 PF07499 RuvA, C-terminal domain MS14413_00861 PF01330 RuvA N terminal domain MS14413_00862 PF17864 RuvB AAA lid domain MS14413_00862 PF05491 RuvB C-terminal winged helix domain MS14413_00862 PF05496 Holliday junction DNA helicase RuvB P-loop domain MS14413_00863 PF07687 Peptidase dimerisation domain MS14413_00863 PF01546 Peptidase family M20/M25/M40 MS14413_00864 PF03061 Thioesterase superfamily MS14413_00865 PF01618 MotA/TolQ/ExbB proton channel family MS14413_00866 PF02472 Biopolymer transport protein ExbD/TolR MS14413_00868 PF07676 WD40-like Beta Propeller Repeat MS14413_00868 PF04052 TolB amino-terminal domain MS14413_00869 PF00691 OmpA family MS14413_00871 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MS14413_00872 PF00588 SpoU rRNA Methylase family MS14413_00872 PF08032 RNA 2'-O ribose methyltransferase substrate binding MS14413_00878 PF00308 Bacterial dnaA protein MS14413_00878 PF11638 DnaA N-terminal domain MS14413_00878 PF08299 Bacterial dnaA protein helix-turn-helix MS14413_00879 PF01594 AI-2E family transporter MS14413_00880 PF02769 AIR synthase related protein, C-terminal domain MS14413_00880 PF00586 AIR synthase related protein, N-terminal domain MS14413_00881 PF00551 Formyl transferase MS14413_00882 PF12697 Alpha/beta hydrolase family MS14413_00883 PF01343 Peptidase family S49 MS14413_00883 PF06965 Na+/H+ antiporter 1 MS14413_00885 PF13567 Domain of unknown function (DUF4131) MS14413_00885 PF00753 Metallo-beta-lactamase superfamily MS14413_00885 PF03772 Competence protein MS14413_00886 PF00005 ABC transporter MS14413_00887 PF02687 FtsX-like permease family MS14413_00887 PF12704 MacB-like periplasmic core domain MS14413_00889 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MS14413_00892 PF00266 Aminotransferase class-V MS14413_00894 PF13533 Biotin-lipoyl like MS14413_00898 PF00535 Glycosyl transferase family 2 MS14413_00901 PF00521 DNA gyrase/topoisomerase IV, subunit A MS14413_00901 PF03989 DNA gyrase C-terminal domain, beta-propeller MS14413_00902 PF01012 Electron transfer flavoprotein domain MS14413_00902 PF00766 Electron transfer flavoprotein FAD-binding domain MS14413_00903 PF01012 Electron transfer flavoprotein domain MS14413_00904 PF02899 Phage integrase, N-terminal SAM-like domain MS14413_00904 PF00589 Phage integrase family MS14413_00905 PF01810 LysE type translocator MS14413_00906 PF01678 Diaminopimelate epimerase MS14413_00907 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MS14413_00907 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MS14413_00909 PF00324 Amino acid permease MS14413_00910 PF18073 Rubredoxin metal binding domain MS14413_00912 PF00152 tRNA synthetases class II (D, K and N) MS14413_00913 PF11890 Domain of unknown function (DUF3410) MS14413_00913 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MS14413_00913 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MS14413_00914 PF06803 Protein of unknown function (DUF1232) MS14413_00915 PF02634 FdhD/NarQ family MS14413_00916 PF00384 Molybdopterin oxidoreductase MS14413_00917 PF02595 Glycerate kinase family MS14413_00920 PF00881 Nitroreductase family MS14413_00925 PF00501 AMP-binding enzyme MS14413_00925 PF00668 Condensation domain MS14413_00925 PF13193 AMP-binding enzyme C-terminal domain MS14413_00925 PF00975 Thioesterase domain MS14413_00925 PF00550 Phosphopantetheine attachment site MS14413_00928 PF03449 Transcription elongation factor, N-terminal MS14413_00928 PF01272 Transcription elongation factor, GreA/GreB, C-term MS14413_00929 PF00497 Bacterial extracellular solute-binding proteins, family 3 MS14413_00929 PF01464 Transglycosylase SLT domain MS14413_00931 PF01171 PP-loop family MS14413_00932 PF01464 Transglycosylase SLT domain MS14413_00933 PF01435 Peptidase family M48 MS14413_00935 PF00873 AcrB/AcrD/AcrF family MS14413_00936 PF03009 Glycerophosphoryl diester phosphodiesterase family MS14413_00938 PF01219 Prokaryotic diacylglycerol kinase MS14413_00939 PF00118 TCP-1/cpn60 chaperonin family MS14413_00940 PF00166 Chaperonin 10 Kd subunit MS14413_00942 PF00149 Calcineurin-like phosphoesterase MS14413_00943 PF00781 Diacylglycerol kinase catalytic domain MS14413_00944 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain MS14413_00944 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain MS14413_00945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MS14413_00945 PF01266 FAD dependent oxidoreductase MS14413_00946 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MS14413_00946 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MS14413_00947 PF00083 Sugar (and other) transporter MS14413_00950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MS14413_00950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MS14413_00953 PF16655 PhoD-like phosphatase, N-terminal domain MS14413_00953 PF09423 PhoD-like phosphatase MS14413_00957 PF00809 Pterin binding enzyme MS14413_00958 PF01434 Peptidase family M41 MS14413_00958 PF06480 FtsH Extracellular MS14413_00958 PF17862 AAA+ lid domain MS14413_00958 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_00959 PF01728 FtsJ-like methyltransferase MS14413_00960 PF01985 CRS1 / YhbY (CRM) domain MS14413_00963 PF00117 Glutamine amidotransferase class-I MS14413_00963 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MS14413_00964 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MS14413_00964 PF02142 MGS-like domain MS14413_00964 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MS14413_00965 PF01272 Transcription elongation factor, GreA/GreB, C-term MS14413_00965 PF03449 Transcription elongation factor, N-terminal MS14413_00966 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_00967 PF00582 Universal stress protein family MS14413_00968 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MS14413_00970 PF09587 Bacterial capsule synthesis protein PGA_cap MS14413_00976 PF04228 Putative neutral zinc metallopeptidase MS14413_00977 PF05661 Protein of unknown function (DUF808) MS14413_00978 PF00579 tRNA synthetases class I (W and Y) MS14413_00979 PF02629 CoA binding domain MS14413_00979 PF00549 CoA-ligase MS14413_00980 PF08442 ATP-grasp domain MS14413_00980 PF00549 CoA-ligase MS14413_00981 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MS14413_00981 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_00982 PF02817 e3 binding domain MS14413_00982 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MS14413_00982 PF00364 Biotin-requiring enzyme MS14413_00983 PF16870 2-oxoglutarate dehydrogenase C-terminal MS14413_00983 PF16078 2-oxoglutarate dehydrogenase N-terminus MS14413_00983 PF02779 Transketolase, pyrimidine binding domain MS14413_00983 PF00676 Dehydrogenase E1 component MS14413_00984 PF13085 2Fe-2S iron-sulfur cluster binding domain MS14413_00985 PF00890 FAD binding domain MS14413_00985 PF02910 Fumarate reductase flavoprotein C-term MS14413_00986 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MS14413_00987 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MS14413_00988 PF00285 Citrate synthase, C-terminal domain MS14413_00994 PF00140 Sigma-70 factor, region 1.2 MS14413_00994 PF03979 Sigma-70 factor, region 1.1 MS14413_00994 PF04542 Sigma-70 region 2 MS14413_00994 PF04546 Sigma-70, non-essential region MS14413_00994 PF04539 Sigma-70 region 3 MS14413_00994 PF04545 Sigma-70, region 4 MS14413_00995 PF04359 Protein of unknown function (DUF493) MS14413_00996 PF03099 Biotin/lipoate A/B protein ligase family MS14413_00998 PF00465 Iron-containing alcohol dehydrogenase MS14413_00999 PF13520 Amino acid permease MS14413_01000 PF03358 NADPH-dependent FMN reductase MS14413_01001 PF01638 HxlR-like helix-turn-helix MS14413_01002 PF00588 SpoU rRNA Methylase family MS14413_01003 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MS14413_01003 PF14824 Sirohaem biosynthesis protein central MS14413_01003 PF10414 Sirohaem synthase dimerisation region MS14413_01004 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MS14413_01004 PF02403 Seryl-tRNA synthetase N-terminal domain MS14413_01006 PF03548 Outer membrane lipoprotein carrier protein LolA MS14413_01007 PF01016 Ribosomal L27 protein MS14413_01008 PF00829 Ribosomal prokaryotic L21 protein MS14413_01009 PF00348 Polyprenyl synthetase MS14413_01011 PF01569 PAP2 superfamily MS14413_01012 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_01012 PF00529 HlyD membrane-fusion protein of T1SS MS14413_01013 PF00873 AcrB/AcrD/AcrF family MS14413_01014 PF02321 Outer membrane efflux protein MS14413_01015 PF01906 Putative heavy-metal-binding MS14413_01016 PF01906 Putative heavy-metal-binding MS14413_01020 PF10458 Valyl tRNA synthetase tRNA binding arm MS14413_01020 PF08264 Anticodon-binding domain of tRNA MS14413_01020 PF00133 tRNA synthetases class I (I, L, M and V) MS14413_01024 PF03466 LysR substrate binding domain MS14413_01024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01025 PF00909 Ammonium Transporter Family MS14413_01027 PF00512 His Kinase A (phospho-acceptor) domain MS14413_01027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01028 PF00072 Response regulator receiver domain MS14413_01028 PF00486 Transcriptional regulatory protein, C terminal MS14413_01029 PF00884 Sulfatase MS14413_01029 PF08019 Phosphoethanolamine transferase EptA/EptB MS14413_01033 PF01734 Patatin-like phospholipase MS14413_01035 PF01145 SPFH domain / Band 7 family MS14413_01036 PF04237 YjbR MS14413_01037 PF00348 Polyprenyl synthetase MS14413_01038 PF04303 PrpF protein MS14413_01039 PF00324 Amino acid permease MS14413_01041 PF01965 DJ-1/PfpI family MS14413_01042 PF14765 Polyketide synthase dehydratase MS14413_01042 PF00550 Phosphopantetheine attachment site MS14413_01042 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_01042 PF08990 Erythronolide synthase docking MS14413_01042 PF09277 Erythronolide synthase, docking MS14413_01042 PF16197 Ketoacyl-synthetase C-terminal extension MS14413_01042 PF00109 Beta-ketoacyl synthase, N-terminal domain MS14413_01042 PF00698 Acyl transferase domain MS14413_01042 PF08659 KR domain MS14413_01042 PF02801 Beta-ketoacyl synthase, C-terminal domain MS14413_01043 PF06719 AraC-type transcriptional regulator N-terminus MS14413_01043 PF12833 Helix-turn-helix domain MS14413_01044 PF02673 Bacitracin resistance protein BacA MS14413_01048 PF02525 Flavodoxin-like fold MS14413_01051 PF01507 Phosphoadenosine phosphosulfate reductase family MS14413_01052 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MS14413_01052 PF06974 Protein of unknown function (DUF1298) MS14413_01054 PF00575 S1 RNA binding domain MS14413_01054 PF10150 Ribonuclease E/G family MS14413_01055 PF02545 Maf-like protein MS14413_01056 PF04093 rod shape-determining protein MreD MS14413_01057 PF04085 rod shape-determining protein MreC MS14413_01059 PF02686 Glu-tRNAGln amidotransferase C subunit MS14413_01060 PF01425 Amidase MS14413_01061 PF02637 GatB domain MS14413_01061 PF02934 GatB/GatE catalytic domain MS14413_01067 PF05992 SbmA/BacA-like family MS14413_01068 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_01068 PF13291 ACT domain MS14413_01069 PF01734 Patatin-like phospholipase MS14413_01070 PF01235 Sodium:alanine symporter family MS14413_01072 PF00881 Nitroreductase family MS14413_01073 PF07690 Major Facilitator Superfamily MS14413_01074 PF12805 FUSC-like inner membrane protein yccS MS14413_01076 PF00258 Flavodoxin MS14413_01076 PF00667 FAD binding domain MS14413_01076 PF00175 Oxidoreductase NAD-binding domain MS14413_01084 PF17969 L,D-transpeptidase C-terminal domain MS14413_01084 PF03734 L,D-transpeptidase catalytic domain MS14413_01085 PF04304 Protein of unknown function (DUF454) MS14413_01087 PF08085 Entericidin EcnA/B family MS14413_01088 PF07687 Peptidase dimerisation domain MS14413_01088 PF01546 Peptidase family M20/M25/M40 MS14413_01090 PF01584 CheW-like domain MS14413_01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01090 PF01627 Hpt domain MS14413_01090 PF00072 Response regulator receiver domain MS14413_01091 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MS14413_01091 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MS14413_01092 PF01584 CheW-like domain MS14413_01093 PF00072 Response regulator receiver domain MS14413_01094 PF00072 Response regulator receiver domain MS14413_01097 PF00873 AcrB/AcrD/AcrF family MS14413_01098 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MS14413_01098 PF03129 Anticodon binding domain MS14413_01098 PF04073 Aminoacyl-tRNA editing domain MS14413_01099 PF07411 Domain of unknown function (DUF1508) MS14413_01100 PF08274 PhnA Zinc-Ribbon MS14413_01100 PF03831 PhnA domain MS14413_01101 PF04343 Protein of unknown function, DUF488 MS14413_01103 PF01571 Aminomethyltransferase folate-binding domain MS14413_01104 PF13098 Thioredoxin-like domain MS14413_01104 PF10411 Disulfide bond isomerase protein N-terminus MS14413_01107 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MS14413_01108 PF07715 TonB-dependent Receptor Plug Domain MS14413_01108 PF00593 TonB dependent receptor MS14413_01111 PF00593 TonB dependent receptor MS14413_01111 PF07715 TonB-dependent Receptor Plug Domain MS14413_01112 PF02245 Methylpurine-DNA glycosylase (MPG) MS14413_01113 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MS14413_01113 PF06827 Zinc finger found in FPG and IleRS MS14413_01113 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MS14413_01119 PF01741 Large-conductance mechanosensitive channel, MscL MS14413_01121 PF00860 Permease family MS14413_01122 PF05175 Methyltransferase small domain MS14413_01122 PF08468 Methyltransferase small domain N-terminal MS14413_01123 PF00324 Amino acid permease MS14413_01124 PF01139 tRNA-splicing ligase RtcB MS14413_01126 PF00691 OmpA family MS14413_01126 PF13505 Outer membrane protein beta-barrel domain MS14413_01128 PF02803 Thiolase, C-terminal domain MS14413_01128 PF00108 Thiolase, N-terminal domain MS14413_01130 PF00893 Small Multidrug Resistance protein MS14413_01132 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MS14413_01132 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MS14413_01133 PF01011 PQQ enzyme repeat MS14413_01134 PF04966 Carbohydrate-selective porin, OprB family MS14413_01135 PF02515 CoA-transferase family III MS14413_01136 PF02311 AraC-like ligand binding domain MS14413_01136 PF12833 Helix-turn-helix domain MS14413_01137 PF02803 Thiolase, C-terminal domain MS14413_01137 PF00108 Thiolase, N-terminal domain MS14413_01138 PF00378 Enoyl-CoA hydratase/isomerase MS14413_01138 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MS14413_01138 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MS14413_01144 PF03006 Haemolysin-III related MS14413_01145 PF00083 Sugar (and other) transporter MS14413_01145 PF07690 Major Facilitator Superfamily MS14413_01147 PF02810 SEC-C motif MS14413_01147 PF07517 SecA DEAD-like domain MS14413_01147 PF01043 SecA preprotein cross-linking domain MS14413_01147 PF07516 SecA Wing and Scaffold domain MS14413_01148 PF00578 AhpC/TSA family MS14413_01148 PF10417 C-terminal domain of 1-Cys peroxiredoxin MS14413_01149 PF00753 Metallo-beta-lactamase superfamily MS14413_01152 PF02875 Mur ligase family, glutamate ligase domain MS14413_01152 PF08245 Mur ligase middle domain MS14413_01153 PF01039 Carboxyl transferase domain MS14413_01154 PF00290 Tryptophan synthase alpha chain MS14413_01159 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_01160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MS14413_01161 PF00593 TonB dependent receptor MS14413_01161 PF07715 TonB-dependent Receptor Plug Domain MS14413_01162 PF01923 Cobalamin adenosyltransferase MS14413_01166 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MS14413_01167 PF00072 Response regulator receiver domain MS14413_01167 PF00486 Transcriptional regulatory protein, C terminal MS14413_01168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01168 PF00672 HAMP domain MS14413_01168 PF00512 His Kinase A (phospho-acceptor) domain MS14413_01170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01170 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01170 PF12806 Acetyl-CoA dehydrogenase C-terminal like MS14413_01170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01171 PF12806 Acetyl-CoA dehydrogenase C-terminal like MS14413_01171 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01171 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01171 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01172 PF03466 LysR substrate binding domain MS14413_01173 PF00043 Glutathione S-transferase, C-terminal domain MS14413_01173 PF02798 Glutathione S-transferase, N-terminal domain MS14413_01174 PF06146 Phosphate-starvation-inducible E MS14413_01178 PF00593 TonB dependent receptor MS14413_01178 PF07715 TonB-dependent Receptor Plug Domain MS14413_01180 PF02938 GAD domain MS14413_01180 PF00152 tRNA synthetases class II (D, K and N) MS14413_01180 PF01336 OB-fold nucleic acid binding domain MS14413_01181 PF17101 Stealth protein CR1, conserved region 1 MS14413_01181 PF11380 Stealth protein CR2, conserved region 2 MS14413_01181 PF17102 Stealth protein CR3, conserved region 3 MS14413_01186 PF00534 Glycosyl transferases group 1 MS14413_01186 PF13439 Glycosyltransferase Family 4 MS14413_01187 PF00535 Glycosyl transferase family 2 MS14413_01188 PF01522 Polysaccharide deacetylase MS14413_01191 PF01063 Amino-transferase class IV MS14413_01192 PF03710 Glutamate-ammonia ligase adenylyltransferase MS14413_01192 PF08335 GlnD PII-uridylyltransferase MS14413_01193 PF07689 KaiB domain MS14413_01193 PF00512 His Kinase A (phospho-acceptor) domain MS14413_01193 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01195 PF02547 Queuosine biosynthesis protein MS14413_01198 PF01702 Queuine tRNA-ribosyltransferase MS14413_01199 PF02699 Preprotein translocase subunit MS14413_01200 PF13721 SecD export protein N-terminal TM region MS14413_01200 PF02355 Protein export membrane protein MS14413_01200 PF07549 SecD/SecF GG Motif MS14413_01201 PF07549 SecD/SecF GG Motif MS14413_01201 PF02355 Protein export membrane protein MS14413_01202 PF02441 Flavoprotein MS14413_01202 PF04127 DNA / pantothenate metabolism flavoprotein MS14413_01203 PF04002 RadC-like JAB domain MS14413_01204 PF01062 Bestrophin, RFP-TM, chloride channel MS14413_01205 PF02811 PHP domain MS14413_01206 PF04279 Intracellular septation protein A MS14413_01207 PF03795 YCII-related domain MS14413_01209 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MS14413_01209 PF01266 FAD dependent oxidoreductase MS14413_01211 PF04461 Protein of unknown function (DUF520) MS14413_01213 PF03061 Thioesterase superfamily MS14413_01214 PF00085 Thioredoxin MS14413_01215 PF00561 alpha/beta hydrolase fold MS14413_01216 PF04273 Putative phosphatase (DUF442) MS14413_01216 PF00753 Metallo-beta-lactamase superfamily MS14413_01218 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MS14413_01218 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_01225 PF17152 Periplasmic sensor domain MS14413_01225 PF00990 Diguanylate cyclase, GGDEF domain MS14413_01226 PF00691 OmpA family MS14413_01226 PF01389 OmpA-like transmembrane domain MS14413_01227 PF10518 TAT (twin-arginine translocation) pathway signal sequence MS14413_01227 PF00149 Calcineurin-like phosphoesterase MS14413_01228 PF13091 PLD-like domain MS14413_01230 PF01926 50S ribosome-binding GTPase MS14413_01230 PF13167 GTP-binding GTPase N-terminal MS14413_01230 PF16360 GTP-binding GTPase Middle Region MS14413_01234 PF00149 Calcineurin-like phosphoesterase MS14413_01235 PF00398 Ribosomal RNA adenine dimethylase MS14413_01236 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MS14413_01237 PF00572 Ribosomal protein L13 MS14413_01238 PF00380 Ribosomal protein S9/S16 MS14413_01239 PF00043 Glutathione S-transferase, C-terminal domain MS14413_01239 PF13417 Glutathione S-transferase, N-terminal domain MS14413_01240 PF04386 Stringent starvation protein B MS14413_01242 PF02785 Biotin carboxylase C-terminal domain MS14413_01242 PF00289 Biotin carboxylase, N-terminal domain MS14413_01242 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MS14413_01242 PF00364 Biotin-requiring enzyme MS14413_01244 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01244 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01244 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01245 PF01039 Carboxyl transferase domain MS14413_01248 PF17932 Tetracyclin repressor-like, C-terminal domain MS14413_01248 PF00440 Bacterial regulatory proteins, tetR family MS14413_01249 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01249 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01249 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01258 PF01066 CDP-alcohol phosphatidyltransferase MS14413_01259 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MS14413_01263 PF00056 lactate/malate dehydrogenase, NAD binding domain MS14413_01263 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MS14413_01265 PF01551 Peptidase family M23 MS14413_01265 PF01464 Transglycosylase SLT domain MS14413_01265 PF10145 Phage-related minor tail protein MS14413_01266 PF01938 TRAM domain MS14413_01266 PF04055 Radical SAM superfamily MS14413_01266 PF00919 Uncharacterized protein family UPF0004 MS14413_01267 PF02562 PhoH-like protein MS14413_01268 PF02130 Uncharacterized protein family UPF0054 MS14413_01273 PF03358 NADPH-dependent FMN reductase MS14413_01274 PF03631 Virulence factor BrkB MS14413_01275 PF00892 EamA-like transporter family MS14413_01276 PF12833 Helix-turn-helix domain MS14413_01277 PF01557 Fumarylacetoacetate (FAA) hydrolase family MS14413_01286 PF00575 S1 RNA binding domain MS14413_01286 PF00773 RNB domain MS14413_01286 PF08206 Ribonuclease B OB domain MS14413_01286 PF08461 Ribonuclease R winged-helix domain MS14413_01286 PF17876 Cold shock domain MS14413_01287 PF01432 Peptidase family M3 MS14413_01288 PF09526 Probable metal-binding protein (DUF2387) MS14413_01295 PF03937 Flavinator of succinate dehydrogenase MS14413_01296 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01296 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01296 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01297 PF00743 Flavin-binding monooxygenase-like MS14413_01298 PF01196 Ribosomal protein L17 MS14413_01299 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MS14413_01299 PF01000 RNA polymerase Rpb3/RpoA insert domain MS14413_01299 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MS14413_01300 PF00163 Ribosomal protein S4/S9 N-terminal domain MS14413_01300 PF01479 S4 domain MS14413_01301 PF00411 Ribosomal protein S11 MS14413_01302 PF00416 Ribosomal protein S13/S18 MS14413_01303 PF00444 Ribosomal protein L36 MS14413_01304 PF00344 SecY translocase MS14413_01305 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MS14413_01306 PF00327 Ribosomal protein L30p/L7e MS14413_01307 PF00333 Ribosomal protein S5, N-terminal domain MS14413_01307 PF03719 Ribosomal protein S5, C-terminal domain MS14413_01308 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MS14413_01309 PF00347 Ribosomal protein L6 MS14413_01310 PF00410 Ribosomal protein S8 MS14413_01311 PF00253 Ribosomal protein S14p/S29e MS14413_01312 PF00281 Ribosomal protein L5 MS14413_01312 PF00673 ribosomal L5P family C-terminus MS14413_01313 PF00467 KOW motif MS14413_01313 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MS14413_01314 PF00238 Ribosomal protein L14p/L23e MS14413_01315 PF00366 Ribosomal protein S17 MS14413_01316 PF00831 Ribosomal L29 protein MS14413_01317 PF00252 Ribosomal protein L16p/L10e MS14413_01318 PF00189 Ribosomal protein S3, C-terminal domain MS14413_01318 PF07650 KH domain MS14413_01319 PF00237 Ribosomal protein L22p/L17e MS14413_01320 PF00203 Ribosomal protein S19 MS14413_01321 PF03947 Ribosomal Proteins L2, C-terminal domain MS14413_01321 PF00181 Ribosomal Proteins L2, RNA binding domain MS14413_01322 PF00276 Ribosomal protein L23 MS14413_01323 PF00573 Ribosomal protein L4/L1 family MS14413_01324 PF00297 Ribosomal protein L3 MS14413_01325 PF00338 Ribosomal protein S10p/S20e MS14413_01326 PF00117 Glutamine amidotransferase class-I MS14413_01327 PF01053 Cys/Met metabolism PLP-dependent enzyme MS14413_01328 PF05872 Bacterial protein of unknown function (DUF853) MS14413_01329 PF00042 Globin MS14413_01329 PF00970 Oxidoreductase FAD-binding domain MS14413_01329 PF00175 Oxidoreductase NAD-binding domain MS14413_01330 PF02082 Transcriptional regulator MS14413_01331 PF01926 50S ribosome-binding GTPase MS14413_01333 PF00375 Sodium:dicarboxylate symporter family MS14413_01335 PF01553 Acyltransferase MS14413_01338 PF17191 RecG wedge domain MS14413_01338 PF00271 Helicase conserved C-terminal domain MS14413_01338 PF00270 DEAD/DEAH box helicase MS14413_01339 PF00156 Phosphoribosyl transferase domain MS14413_01340 PF00293 NUDIX domain MS14413_01341 PF03641 Possible lysine decarboxylase MS14413_01342 PF01544 CorA-like Mg2+ transporter protein MS14413_01344 PF05494 MlaC protein MS14413_01346 PF02405 Permease MlaE MS14413_01347 PF00005 ABC transporter MS14413_01348 PF00271 Helicase conserved C-terminal domain MS14413_01348 PF12343 Cold shock protein DEAD box A MS14413_01348 PF00270 DEAD/DEAH box helicase MS14413_01348 PF03880 DbpA RNA binding domain MS14413_01349 PF00459 Inositol monophosphatase family MS14413_01350 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MS14413_01350 PF02779 Transketolase, pyrimidine binding domain MS14413_01350 PF02780 Transketolase, C-terminal domain MS14413_01351 PF00925 GTP cyclohydrolase II MS14413_01352 PF01218 Coproporphyrinogen III oxidase MS14413_01353 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MS14413_01353 PF01488 Shikimate / quinate 5-dehydrogenase MS14413_01353 PF08501 Shikimate dehydrogenase substrate binding domain MS14413_01357 PF12806 Acetyl-CoA dehydrogenase C-terminal like MS14413_01357 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01357 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01357 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01359 PF04024 PspC domain MS14413_01360 PF00571 CBS domain MS14413_01365 PF02091 Glycyl-tRNA synthetase alpha subunit MS14413_01366 PF02092 Glycyl-tRNA synthetase beta subunit MS14413_01366 PF05746 DALR anticodon binding domain MS14413_01368 PF00892 EamA-like transporter family MS14413_01369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01369 PF03466 LysR substrate binding domain MS14413_01374 PF05922 Peptidase inhibitor I9 MS14413_01374 PF00082 Subtilase family MS14413_01377 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MS14413_01378 PF04996 Succinylarginine dihydrolase MS14413_01379 PF00171 Aldehyde dehydrogenase family MS14413_01380 PF04958 Arginine N-succinyltransferase beta subunit MS14413_01381 PF00202 Aminotransferase class-III MS14413_01382 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MS14413_01382 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MS14413_01383 PF00324 Amino acid permease MS14413_01390 PF01594 AI-2E family transporter MS14413_01391 PF00080 Copper/zinc superoxide dismutase (SODC) MS14413_01392 PF12805 FUSC-like inner membrane protein yccS MS14413_01393 PF07690 Major Facilitator Superfamily MS14413_01395 PF02525 Flavodoxin-like fold MS14413_01396 PF03992 Antibiotic biosynthesis monooxygenase MS14413_01398 PF01565 FAD binding domain MS14413_01398 PF02913 FAD linked oxidases, C-terminal domain MS14413_01399 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MS14413_01399 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MS14413_01400 PF00892 EamA-like transporter family MS14413_01401 PF00892 EamA-like transporter family MS14413_01403 PF01925 Sulfite exporter TauE/SafE MS14413_01404 PF16198 tRNA pseudouridylate synthase B C-terminal domain MS14413_01404 PF01509 TruB family pseudouridylate synthase (N terminal domain) MS14413_01404 PF09157 Pseudouridine synthase II TruB, C-terminal MS14413_01405 PF03280 Proteobacterial lipase chaperone protein MS14413_01406 PF00561 alpha/beta hydrolase fold MS14413_01407 PF01245 Ribosomal protein L19 MS14413_01408 PF01746 tRNA (Guanine-1)-methyltransferase MS14413_01409 PF05239 PRC-barrel domain MS14413_01409 PF01782 RimM N-terminal domain MS14413_01410 PF00886 Ribosomal protein S16 MS14413_01418 PF02401 LytB protein MS14413_01419 PF00625 Guanylate kinase MS14413_01420 PF01192 RNA polymerase Rpb6 MS14413_01421 PF02824 TGS domain MS14413_01421 PF04607 Region found in RelA / SpoT proteins MS14413_01421 PF13291 ACT domain MS14413_01422 PF01042 Endoribonuclease L-PSP MS14413_01423 PF04324 BFD-like [2Fe-2S] binding domain MS14413_01424 PF00210 Ferritin-like domain MS14413_01427 PF11846 Virulence factor membrane-bound polymerase, C-terminal MS14413_01427 PF04932 O-Antigen ligase MS14413_01427 PF15864 Protein glycosylation ligase MS14413_01429 PF07963 Prokaryotic N-terminal methylation motif MS14413_01429 PF00114 Pilin (bacterial filament) MS14413_01431 PF04536 TPM domain MS14413_01432 PF04011 LemA family MS14413_01434 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_01434 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MS14413_01435 PF00310 Glutamine amidotransferases class-II MS14413_01435 PF04898 Glutamate synthase central domain MS14413_01435 PF01645 Conserved region in glutamate synthase MS14413_01435 PF01493 GXGXG motif MS14413_01437 PF01761 3-dehydroquinate synthase MS14413_01438 PF01202 Shikimate kinase MS14413_01439 PF00263 Bacterial type II and III secretion system protein MS14413_01439 PF07660 Secretin and TonB N terminus short domain MS14413_01439 PF03958 Bacterial type II/III secretion system short domain MS14413_01439 PF11741 AMIN domain MS14413_01444 PF00905 Penicillin binding protein transpeptidase domain MS14413_01444 PF00912 Transglycosylase MS14413_01444 PF17092 Penicillin-binding protein OB-like domain MS14413_01445 PF13847 Methyltransferase domain MS14413_01447 PF00953 Glycosyl transferase family 4 MS14413_01448 PF08245 Mur ligase middle domain MS14413_01448 PF01225 Mur ligase family, catalytic domain MS14413_01448 PF02875 Mur ligase family, glutamate ligase domain MS14413_01449 PF01225 Mur ligase family, catalytic domain MS14413_01449 PF02875 Mur ligase family, glutamate ligase domain MS14413_01449 PF08245 Mur ligase middle domain MS14413_01450 PF00905 Penicillin binding protein transpeptidase domain MS14413_01450 PF03717 Penicillin-binding Protein dimerisation domain MS14413_01452 PF01795 MraW methylase family MS14413_01455 PF00749 tRNA synthetases class I (E and Q), catalytic domain MS14413_01458 PF00324 Amino acid permease MS14413_01464 PF01545 Cation efflux family MS14413_01465 PF00873 AcrB/AcrD/AcrF family MS14413_01466 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_01466 PF00529 HlyD membrane-fusion protein of T1SS MS14413_01469 PF04191 Phospholipid methyltransferase MS14413_01474 PF12848 ABC transporter MS14413_01474 PF00005 ABC transporter MS14413_01475 PF01053 Cys/Met metabolism PLP-dependent enzyme MS14413_01476 PF00106 short chain dehydrogenase MS14413_01477 PF01740 STAS domain MS14413_01477 PF00916 Sulfate permease family MS14413_01478 PF16921 Tex protein YqgF-like domain MS14413_01478 PF17674 HHH domain MS14413_01478 PF00575 S1 RNA binding domain MS14413_01478 PF09371 Tex-like protein N-terminal domain MS14413_01479 PF00486 Transcriptional regulatory protein, C terminal MS14413_01479 PF00072 Response regulator receiver domain MS14413_01480 PF00512 His Kinase A (phospho-acceptor) domain MS14413_01480 PF00672 HAMP domain MS14413_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01481 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MS14413_01481 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MS14413_01482 PF00583 Acetyltransferase (GNAT) family MS14413_01486 PF00475 Imidazoleglycerol-phosphate dehydratase MS14413_01487 PF00117 Glutamine amidotransferase class-I MS14413_01490 PF00977 Histidine biosynthesis protein MS14413_01493 PF03992 Antibiotic biosynthesis monooxygenase MS14413_01496 PF01636 Phosphotransferase enzyme family MS14413_01497 PF00977 Histidine biosynthesis protein MS14413_01500 PF00230 Major intrinsic protein MS14413_01505 PF02705 K+ potassium transporter MS14413_01509 PF02525 Flavodoxin-like fold MS14413_01510 PF01638 HxlR-like helix-turn-helix MS14413_01515 PF12833 Helix-turn-helix domain MS14413_01515 PF02311 AraC-like ligand binding domain MS14413_01516 PF00248 Aldo/keto reductase family MS14413_01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01520 PF03466 LysR substrate binding domain MS14413_01521 PF07690 Major Facilitator Superfamily MS14413_01526 PF01593 Flavin containing amine oxidoreductase MS14413_01527 PF05726 Pirin C-terminal cupin domain MS14413_01527 PF02678 Pirin MS14413_01528 PF00857 Isochorismatase family MS14413_01529 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01530 PF00171 Aldehyde dehydrogenase family MS14413_01531 PF00202 Aminotransferase class-III MS14413_01532 PF00155 Aminotransferase class I and II MS14413_01532 PF00392 Bacterial regulatory proteins, gntR family MS14413_01533 PF00324 Amino acid permease MS14413_01535 PF03591 AzlC protein MS14413_01537 PF00436 Single-strand binding protein family MS14413_01538 PF07690 Major Facilitator Superfamily MS14413_01540 PF08543 Phosphomethylpyrimidine kinase MS14413_01540 PF03070 TENA/THI-4/PQQC family MS14413_01540 PF02581 Thiamine monophosphate synthase MS14413_01541 PF06942 GlpM protein MS14413_01543 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_01543 PF00107 Zinc-binding dehydrogenase MS14413_01544 PF00440 Bacterial regulatory proteins, tetR family MS14413_01544 PF16925 Tetracyclin repressor-like, C-terminal domain MS14413_01545 PF00005 ABC transporter MS14413_01545 PF17760 UvrA interaction domain MS14413_01545 PF17755 UvrA DNA-binding domain MS14413_01547 PF00990 Diguanylate cyclase, GGDEF domain MS14413_01552 PF00905 Penicillin binding protein transpeptidase domain MS14413_01557 PF02028 BCCT, betaine/carnitine/choline family transporter MS14413_01559 PF00474 Sodium:solute symporter family MS14413_01560 PF04341 Protein of unknown function, DUF485 MS14413_01561 PF00512 His Kinase A (phospho-acceptor) domain MS14413_01561 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01561 PF01627 Hpt domain MS14413_01561 PF00672 HAMP domain MS14413_01561 PF00072 Response regulator receiver domain MS14413_01563 PF00196 Bacterial regulatory proteins, luxR family MS14413_01563 PF00072 Response regulator receiver domain MS14413_01564 PF03358 NADPH-dependent FMN reductase MS14413_01565 PF00296 Luciferase-like monooxygenase MS14413_01566 PF00872 Transposase, Mutator family MS14413_01567 PF01037 Lrp/AsnC ligand binding domain MS14413_01568 PF00857 Isochorismatase family MS14413_01569 PF00501 AMP-binding enzyme MS14413_01569 PF16177 Acetyl-coenzyme A synthetase N-terminus MS14413_01569 PF13193 AMP-binding enzyme C-terminal domain MS14413_01571 PF00924 Mechanosensitive ion channel MS14413_01572 PF04452 RNA methyltransferase MS14413_01573 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MS14413_01574 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MS14413_01577 PF00472 RF-1 domain MS14413_01577 PF03462 PCRF domain MS14413_01579 PF01368 DHH family MS14413_01579 PF02272 DHHA1 domain MS14413_01579 PF17768 RecJ OB domain MS14413_01580 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MS14413_01580 PF01243 Pyridoxamine 5'-phosphate oxidase MS14413_01581 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MS14413_01581 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MS14413_01581 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MS14413_01581 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MS14413_01582 PF00571 CBS domain MS14413_01582 PF00478 IMP dehydrogenase / GMP reductase domain MS14413_01583 PF03692 Putative zinc- or iron-chelating domain MS14413_01584 PF01613 Flavin reductase like domain MS14413_01584 PF00258 Flavodoxin MS14413_01585 PF07715 TonB-dependent Receptor Plug Domain MS14413_01585 PF00593 TonB dependent receptor MS14413_01586 PF01169 Uncharacterized protein family UPF0016 MS14413_01588 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MS14413_01588 PF00364 Biotin-requiring enzyme MS14413_01588 PF02817 e3 binding domain MS14413_01589 PF00456 Transketolase, thiamine diphosphate binding domain MS14413_01589 PF17831 Pyruvate dehydrogenase E1 component middle domain MS14413_01590 PF01551 Peptidase family M23 MS14413_01592 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MS14413_01593 PF00091 Tubulin/FtsZ family, GTPase domain MS14413_01593 PF12327 FtsZ family, C-terminal domain MS14413_01594 PF02491 SHS2 domain inserted in FTSA MS14413_01595 PF08478 POTRA domain, FtsQ-type MS14413_01595 PF03799 Cell division protein FtsQ MS14413_01596 PF07478 D-ala D-ala ligase C-terminus MS14413_01596 PF01820 D-ala D-ala ligase N-terminus MS14413_01597 PF01225 Mur ligase family, catalytic domain MS14413_01597 PF02875 Mur ligase family, glutamate ligase domain MS14413_01597 PF08245 Mur ligase middle domain MS14413_01598 PF04101 Glycosyltransferase family 28 C-terminal domain MS14413_01598 PF03033 Glycosyltransferase family 28 N-terminal domain MS14413_01599 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MS14413_01599 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MS14413_01601 PF00593 TonB dependent receptor MS14413_01601 PF07715 TonB-dependent Receptor Plug Domain MS14413_01602 PF00156 Phosphoribosyl transferase domain MS14413_01603 PF03372 Endonuclease/Exonuclease/phosphatase family MS14413_01604 PF03960 ArsC family MS14413_01606 PF07859 alpha/beta hydrolase fold MS14413_01607 PF07694 5TMR of 5TMR-LYT MS14413_01607 PF00990 Diguanylate cyclase, GGDEF domain MS14413_01608 PF11412 Disulphide bond corrector protein DsbC MS14413_01608 PF02683 Cytochrome C biogenesis protein transmembrane region MS14413_01614 PF00576 HIUase/Transthyretin family MS14413_01615 PF00860 Permease family MS14413_01617 PF01494 FAD binding domain MS14413_01618 PF03561 Allantoicase repeat MS14413_01619 PF04115 Ureidoglycolate lyase MS14413_01620 PF00106 short chain dehydrogenase MS14413_01621 PF00986 DNA gyrase B subunit, carboxyl terminus MS14413_01621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01621 PF00204 DNA gyrase B MS14413_01621 PF01751 Toprim domain MS14413_01622 PF05728 Uncharacterised protein family (UPF0227) MS14413_01625 PF00877 NlpC/P60 family MS14413_01625 PF01476 LysM domain MS14413_01626 PF04717 Type VI secretion system, phage-baseplate injector MS14413_01627 PF02600 Disulfide bond formation protein DsbB MS14413_01628 PF04262 Glutamate-cysteine ligase MS14413_01631 PF04286 Protein of unknown function (DUF445) MS14413_01632 PF00155 Aminotransferase class I and II MS14413_01633 PF01554 MatE MS14413_01634 PF00106 short chain dehydrogenase MS14413_01636 PF00072 Response regulator receiver domain MS14413_01636 PF00486 Transcriptional regulatory protein, C terminal MS14413_01637 PF11808 Phosphate regulon sensor protein PhoR MS14413_01637 PF00512 His Kinase A (phospho-acceptor) domain MS14413_01637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01637 PF00989 PAS fold MS14413_01641 PF03069 Acetamidase/Formamidase family MS14413_01642 PF02666 Phosphatidylserine decarboxylase MS14413_01643 PF00581 Rhodanese-like domain MS14413_01644 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MS14413_01644 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MS14413_01645 PF02580 D-Tyr-tRNA(Tyr) deacylase MS14413_01650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MS14413_01650 PF00925 GTP cyclohydrolase II MS14413_01651 PF00885 6,7-dimethyl-8-ribityllumazine synthase MS14413_01652 PF01029 NusB family MS14413_01653 PF00586 AIR synthase related protein, N-terminal domain MS14413_01653 PF02769 AIR synthase related protein, C-terminal domain MS14413_01654 PF04608 Phosphatidylglycerophosphatase A MS14413_01655 PF12804 MobA-like NTP transferase domain MS14413_01655 PF14602 Hexapeptide repeat of succinyl-transferase MS14413_01655 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_01656 PF01380 SIS domain MS14413_01657 PF01177 Asp/Glu/Hydantoin racemase MS14413_01660 PF00491 Arginase family MS14413_01661 PF01979 Amidohydrolase family MS14413_01662 PF00324 Amino acid permease MS14413_01663 PF00221 Aromatic amino acid lyase MS14413_01664 PF17391 Urocanase N-terminal domain MS14413_01664 PF17392 Urocanase C-terminal domain MS14413_01664 PF01175 Urocanase Rossmann-like domain MS14413_01665 PF05962 HutD MS14413_01666 PF07702 UTRA domain MS14413_01666 PF00392 Bacterial regulatory proteins, gntR family MS14413_01668 PF02492 CobW/HypB/UreG, nucleotide-binding domain MS14413_01668 PF07683 Cobalamin synthesis protein cobW C-terminal domain MS14413_01670 PF00324 Amino acid permease MS14413_01672 PF02798 Glutathione S-transferase, N-terminal domain MS14413_01672 PF14497 Glutathione S-transferase, C-terminal domain MS14413_01673 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MS14413_01675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MS14413_01676 PF04463 Protein of unknown function (DUF523) MS14413_01677 PF01554 MatE MS14413_01678 PF01758 Sodium Bile acid symporter family MS14413_01679 PF00857 Isochorismatase family MS14413_01680 PF00701 Dihydrodipicolinate synthetase family MS14413_01682 PF01259 SAICAR synthetase MS14413_01684 PF01226 Formate/nitrite transporter MS14413_01685 PF12002 MgsA AAA+ ATPase C terminal MS14413_01685 PF16193 AAA C-terminal domain MS14413_01685 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_01686 PF07995 Glucose / Sorbosone dehydrogenase MS14413_01687 PF03692 Putative zinc- or iron-chelating domain MS14413_01688 PF07043 Protein of unknown function (DUF1328) MS14413_01691 PF00730 HhH-GPD superfamily base excision DNA repair protein MS14413_01691 PF10576 Iron-sulfur binding domain of endonuclease III MS14413_01691 PF00633 Helix-hairpin-helix motif MS14413_01691 PF14815 NUDIX domain MS14413_01694 PF03352 Methyladenine glycosylase MS14413_01695 PF00107 Zinc-binding dehydrogenase MS14413_01695 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_01696 PF00155 Aminotransferase class I and II MS14413_01696 PF00392 Bacterial regulatory proteins, gntR family MS14413_01698 PF03466 LysR substrate binding domain MS14413_01698 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01699 PF00248 Aldo/keto reductase family MS14413_01700 PF07690 Major Facilitator Superfamily MS14413_01702 PF01113 Dihydrodipicolinate reductase, N-terminus MS14413_01702 PF05173 Dihydrodipicolinate reductase, C-terminus MS14413_01704 PF00684 DnaJ central domain MS14413_01704 PF00226 DnaJ domain MS14413_01704 PF01556 DnaJ C terminal domain MS14413_01706 PF00873 AcrB/AcrD/AcrF family MS14413_01707 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_01708 PF00440 Bacterial regulatory proteins, tetR family MS14413_01708 PF08361 MAATS-type transcriptional repressor, C-terminal region MS14413_01709 PF00311 Phosphoenolpyruvate carboxylase MS14413_01710 PF00860 Permease family MS14413_01711 PF03466 LysR substrate binding domain MS14413_01711 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01714 PF00920 Dehydratase family MS14413_01715 PF00551 Formyl transferase MS14413_01715 PF02911 Formyl transferase, C-terminal domain MS14413_01716 PF01029 NusB family MS14413_01716 PF01189 16S rRNA methyltransferase RsmB/F MS14413_01718 PF00209 Sodium:neurotransmitter symporter family MS14413_01726 PF00579 tRNA synthetases class I (W and Y) MS14413_01727 PF03702 Anhydro-N-acetylmuramic acid kinase MS14413_01728 PF00561 alpha/beta hydrolase fold MS14413_01729 PF01521 Iron-sulphur cluster biosynthesis MS14413_01733 PF12848 ABC transporter MS14413_01733 PF00005 ABC transporter MS14413_01734 PF09335 SNARE associated Golgi protein MS14413_01736 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_01736 PF18053 DNA gyrase B subunit insert domain MS14413_01736 PF00986 DNA gyrase B subunit, carboxyl terminus MS14413_01736 PF00204 DNA gyrase B MS14413_01736 PF01751 Toprim domain MS14413_01737 PF02463 RecF/RecN/SMC N terminal domain MS14413_01738 PF02767 DNA polymerase III beta subunit, central domain MS14413_01738 PF02768 DNA polymerase III beta subunit, C-terminal domain MS14413_01738 PF00712 DNA polymerase III beta subunit, N-terminal domain MS14413_01739 PF08299 Bacterial dnaA protein helix-turn-helix MS14413_01739 PF00308 Bacterial dnaA protein MS14413_01739 PF11638 DnaA N-terminal domain MS14413_01740 PF00468 Ribosomal protein L34 MS14413_01741 PF00825 Ribonuclease P MS14413_01742 PF01809 Putative membrane protein insertion efficiency factor MS14413_01743 PF14849 YidC periplasmic domain MS14413_01743 PF02096 60Kd inner membrane protein MS14413_01744 PF01926 50S ribosome-binding GTPase MS14413_01744 PF10396 GTP-binding protein TrmE N-terminus MS14413_01744 PF12631 MnmE helical domain MS14413_01745 PF02583 Metal-sensitive transcriptional repressor MS14413_01746 PF01545 Cation efflux family MS14413_01746 PF16916 Dimerisation domain of Zinc Transporter MS14413_01747 PF13098 Thioredoxin-like domain MS14413_01747 PF10411 Disulfide bond isomerase protein N-terminus MS14413_01749 PF00156 Phosphoribosyl transferase domain MS14413_01751 PF01979 Amidohydrolase family MS14413_01752 PF00355 Rieske [2Fe-2S] domain MS14413_01753 PF03738 Glutathionylspermidine synthase preATP-grasp MS14413_01755 PF03741 Integral membrane protein TerC family MS14413_01756 PF01569 PAP2 superfamily MS14413_01758 PF01225 Mur ligase family, catalytic domain MS14413_01758 PF08245 Mur ligase middle domain MS14413_01758 PF02875 Mur ligase family, glutamate ligase domain MS14413_01760 PF00731 AIR carboxylase MS14413_01761 PF02222 ATP-grasp domain MS14413_01761 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MS14413_01763 PF13406 Transglycosylase SLT domain MS14413_01767 PF00012 Hsp70 protein MS14413_01768 PF01025 GrpE MS14413_01769 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_01769 PF03466 LysR substrate binding domain MS14413_01773 PF07859 alpha/beta hydrolase fold MS14413_01774 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MS14413_01782 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MS14413_01783 PF01252 Signal peptidase (SPase) II MS14413_01784 PF06827 Zinc finger found in FPG and IleRS MS14413_01784 PF00133 tRNA synthetases class I (I, L, M and V) MS14413_01784 PF08264 Anticodon-binding domain of tRNA MS14413_01785 PF01687 Riboflavin kinase MS14413_01785 PF06574 FAD synthetase MS14413_01787 PF01048 Phosphorylase superfamily MS14413_01788 PF08362 YcdC-like protein, C-terminal region MS14413_01788 PF00440 Bacterial regulatory proteins, tetR family MS14413_01789 PF00005 ABC transporter MS14413_01790 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_01791 PF00296 Luciferase-like monooxygenase MS14413_01792 PF09084 NMT1/THI5 like MS14413_01793 PF09084 NMT1/THI5 like MS14413_01794 PF00583 Acetyltransferase (GNAT) family MS14413_01794 PF00696 Amino acid kinase family MS14413_01799 PF00106 short chain dehydrogenase MS14413_01800 PF13419 Haloacid dehalogenase-like hydrolase MS14413_01802 PF01323 DSBA-like thioredoxin domain MS14413_01803 PF00440 Bacterial regulatory proteins, tetR family MS14413_01803 PF08360 QacR-like protein, C-terminal region MS14413_01804 PF00440 Bacterial regulatory proteins, tetR family MS14413_01805 PF00175 Oxidoreductase NAD-binding domain MS14413_01806 PF00487 Fatty acid desaturase MS14413_01807 PF01138 3' exoribonuclease family, domain 1 MS14413_01807 PF03725 3' exoribonuclease family, domain 2 MS14413_01808 PF04185 Phosphoesterase family MS14413_01808 PF05506 Domain of unknown function (DUF756) MS14413_01810 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MS14413_01810 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MS14413_01811 PF01510 N-acetylmuramoyl-L-alanine amidase MS14413_01812 PF03023 Lipid II flippase MurJ MS14413_01813 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MS14413_01813 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MS14413_01814 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MS14413_01814 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MS14413_01815 PF00665 Integrase core domain MS14413_01815 PF13936 Helix-turn-helix domain MS14413_01817 PF02706 Chain length determinant protein MS14413_01817 PF13807 G-rich domain on putative tyrosine kinase MS14413_01817 PF13614 AAA domain MS14413_01818 PF01451 Low molecular weight phosphotyrosine protein phosphatase MS14413_01819 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MS14413_01819 PF02563 Polysaccharide biosynthesis/export protein MS14413_01819 PF10531 SLBB domain MS14413_01820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MS14413_01820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MS14413_01820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MS14413_01821 PF02719 Polysaccharide biosynthesis protein MS14413_01822 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MS14413_01823 PF02350 UDP-N-acetylglucosamine 2-epimerase MS14413_01824 PF03102 NeuB family MS14413_01824 PF08666 SAF domain MS14413_01826 PF00483 Nucleotidyl transferase MS14413_01827 PF02348 Cytidylyltransferase MS14413_01834 PF00665 Integrase core domain MS14413_01834 PF13936 Helix-turn-helix domain MS14413_01837 PF08485 Polysaccharide biosynthesis protein C-terminal MS14413_01837 PF02719 Polysaccharide biosynthesis protein MS14413_01838 PF01370 NAD dependent epimerase/dehydratase family MS14413_01839 PF02350 UDP-N-acetylglucosamine 2-epimerase MS14413_01840 PF13579 Glycosyl transferase 4-like domain MS14413_01841 PF01370 NAD dependent epimerase/dehydratase family MS14413_01842 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MS14413_01842 PF00953 Glycosyl transferase family 4 MS14413_01843 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_01843 PF17836 PglD N-terminal domain MS14413_01844 PF02719 Polysaccharide biosynthesis protein MS14413_01845 PF00483 Nucleotidyl transferase MS14413_01846 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MS14413_01846 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MS14413_01846 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MS14413_01847 PF00342 Phosphoglucose isomerase MS14413_01848 PF16363 GDP-mannose 4,6 dehydratase MS14413_01849 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MS14413_01849 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MS14413_01849 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MS14413_01849 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MS14413_01850 PF02652 L-lactate permease MS14413_01851 PF00392 Bacterial regulatory proteins, gntR family MS14413_01851 PF07729 FCD domain MS14413_01852 PF01070 FMN-dependent dehydrogenase MS14413_01854 PF01565 FAD binding domain MS14413_01854 PF09330 D-lactate dehydrogenase, membrane binding MS14413_01858 PF00155 Aminotransferase class I and II MS14413_01859 PF00155 Aminotransferase class I and II MS14413_01860 PF00392 Bacterial regulatory proteins, gntR family MS14413_01860 PF07729 FCD domain MS14413_01862 PF00285 Citrate synthase, C-terminal domain MS14413_01863 PF00694 Aconitase C-terminal domain MS14413_01863 PF00330 Aconitase family (aconitate hydratase) MS14413_01871 PF00293 NUDIX domain MS14413_01875 PF00849 RNA pseudouridylate synthase MS14413_01878 PF07715 TonB-dependent Receptor Plug Domain MS14413_01878 PF00593 TonB dependent receptor MS14413_01884 PF00905 Penicillin binding protein transpeptidase domain MS14413_01887 PF13579 Glycosyl transferase 4-like domain MS14413_01888 PF01370 NAD dependent epimerase/dehydratase family MS14413_01889 PF00953 Glycosyl transferase family 4 MS14413_01889 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MS14413_01890 PF17836 PglD N-terminal domain MS14413_01890 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_01891 PF02719 Polysaccharide biosynthesis protein MS14413_01892 PF00483 Nucleotidyl transferase MS14413_01893 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MS14413_01893 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MS14413_01893 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MS14413_01894 PF00342 Phosphoglucose isomerase MS14413_01895 PF16363 GDP-mannose 4,6 dehydratase MS14413_01896 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MS14413_01896 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MS14413_01896 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MS14413_01896 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MS14413_01897 PF02652 L-lactate permease MS14413_01898 PF00392 Bacterial regulatory proteins, gntR family MS14413_01898 PF07729 FCD domain MS14413_01899 PF01070 FMN-dependent dehydrogenase MS14413_01900 PF01565 FAD binding domain MS14413_01900 PF09330 D-lactate dehydrogenase, membrane binding MS14413_01901 PF00155 Aminotransferase class I and II MS14413_01902 PF07729 FCD domain MS14413_01902 PF00392 Bacterial regulatory proteins, gntR family MS14413_01905 PF00285 Citrate synthase, C-terminal domain MS14413_01906 PF00330 Aconitase family (aconitate hydratase) MS14413_01906 PF00694 Aconitase C-terminal domain MS14413_01907 PF00330 Aconitase family (aconitate hydratase) MS14413_01907 PF00694 Aconitase C-terminal domain MS14413_01908 PF00694 Aconitase C-terminal domain MS14413_01908 PF00330 Aconitase family (aconitate hydratase) MS14413_01911 PF00293 NUDIX domain MS14413_01916 PF00849 RNA pseudouridylate synthase MS14413_01919 PF07715 TonB-dependent Receptor Plug Domain MS14413_01919 PF00593 TonB dependent receptor MS14413_01925 PF00905 Penicillin binding protein transpeptidase domain MS14413_01929 PF01037 Lrp/AsnC ligand binding domain MS14413_01930 PF01266 FAD dependent oxidoreductase MS14413_01931 PF00842 Alanine racemase, C-terminal domain MS14413_01931 PF01168 Alanine racemase, N-terminal domain MS14413_01932 PF01042 Endoribonuclease L-PSP MS14413_01933 PF00324 Amino acid permease MS14413_01934 PF00324 Amino acid permease MS14413_01936 PF00171 Aldehyde dehydrogenase family MS14413_01937 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MS14413_01937 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MS14413_01938 PF13193 AMP-binding enzyme C-terminal domain MS14413_01938 PF00501 AMP-binding enzyme MS14413_01939 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01939 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01939 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01940 PF00378 Enoyl-CoA hydratase/isomerase MS14413_01941 PF00378 Enoyl-CoA hydratase/isomerase MS14413_01942 PF07690 Major Facilitator Superfamily MS14413_01942 PF00083 Sugar (and other) transporter MS14413_01943 PF00765 Autoinducer synthase MS14413_01945 PF03472 Autoinducer binding domain MS14413_01945 PF00196 Bacterial regulatory proteins, luxR family MS14413_01946 PF00501 AMP-binding enzyme MS14413_01947 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_01947 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_01947 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_01948 PF14765 Polyketide synthase dehydratase MS14413_01948 PF00975 Thioesterase domain MS14413_01948 PF00550 Phosphopantetheine attachment site MS14413_01948 PF08242 Methyltransferase domain MS14413_01948 PF02801 Beta-ketoacyl synthase, C-terminal domain MS14413_01948 PF16197 Ketoacyl-synthetase C-terminal extension MS14413_01948 PF00109 Beta-ketoacyl synthase, N-terminal domain MS14413_01949 PF00501 AMP-binding enzyme MS14413_01949 PF13193 AMP-binding enzyme C-terminal domain MS14413_01949 PF00668 Condensation domain MS14413_01949 PF00550 Phosphopantetheine attachment site MS14413_01949 PF00975 Thioesterase domain MS14413_01952 PF12697 Alpha/beta hydrolase family MS14413_01953 PF01648 4'-phosphopantetheinyl transferase superfamily MS14413_01956 PF01722 BolA-like protein MS14413_01958 PF13614 AAA domain MS14413_01961 PF09335 SNARE associated Golgi protein MS14413_01962 PF07681 DoxX MS14413_01963 PF04286 Protein of unknown function (DUF445) MS14413_01964 PF00117 Glutamine amidotransferase class-I MS14413_01964 PF00958 GMP synthase C terminal domain MS14413_01964 PF02540 NAD synthase MS14413_01965 PF13427 Domain of unknown function (DUF4111) MS14413_01965 PF01909 Nucleotidyltransferase domain MS14413_01966 PF03551 Transcriptional regulator PadR-like family MS14413_01968 PF02678 Pirin MS14413_01968 PF05726 Pirin C-terminal cupin domain MS14413_01972 PF05746 DALR anticodon binding domain MS14413_01972 PF03485 Arginyl tRNA synthetase N terminal domain MS14413_01972 PF00750 tRNA synthetases class I (R) MS14413_01973 PF00390 Malic enzyme, N-terminal domain MS14413_01973 PF03949 Malic enzyme, NAD binding domain MS14413_01975 PF04261 Dyp-type peroxidase family MS14413_01976 PF01810 LysE type translocator MS14413_01977 PF00950 ABC 3 transport family MS14413_01978 PF00005 ABC transporter MS14413_01982 PF00119 ATP synthase A chain MS14413_01983 PF00137 ATP synthase subunit C MS14413_01984 PF00430 ATP synthase B/B' CF(0) MS14413_01985 PF00213 ATP synthase delta (OSCP) subunit MS14413_01986 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MS14413_01986 PF00306 ATP synthase alpha/beta chain, C terminal domain MS14413_01986 PF02874 ATP synthase alpha/beta family, beta-barrel domain MS14413_01987 PF00231 ATP synthase MS14413_01988 PF02874 ATP synthase alpha/beta family, beta-barrel domain MS14413_01988 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MS14413_01989 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MS14413_01990 PF11008 Protein of unknown function (DUF2846) MS14413_01992 PF00255 Glutathione peroxidase MS14413_01994 PF07690 Major Facilitator Superfamily MS14413_01995 PF00440 Bacterial regulatory proteins, tetR family MS14413_01996 PF00892 EamA-like transporter family MS14413_01997 PF01300 Telomere recombination MS14413_01998 PF17782 DprA winged helix domain MS14413_01998 PF02481 DNA recombination-mediator protein A MS14413_02000 PF01327 Polypeptide deformylase MS14413_02005 PF00440 Bacterial regulatory proteins, tetR family MS14413_02012 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_02014 PF03358 NADPH-dependent FMN reductase MS14413_02018 PF08497 Radical SAM N-terminal MS14413_02018 PF04055 Radical SAM superfamily MS14413_02018 PF11842 Domain of unknown function (DUF3362) MS14413_02021 PF11798 IMS family HHH motif MS14413_02021 PF11799 impB/mucB/samB family C-terminal domain MS14413_02021 PF00817 impB/mucB/samB family MS14413_02023 PF07690 Major Facilitator Superfamily MS14413_02024 PF03641 Possible lysine decarboxylase MS14413_02025 PF03471 Transporter associated domain MS14413_02025 PF03741 Integral membrane protein TerC family MS14413_02026 PF02810 SEC-C motif MS14413_02027 PF03458 UPF0126 domain MS14413_02028 PF07690 Major Facilitator Superfamily MS14413_02029 PF03989 DNA gyrase C-terminal domain, beta-propeller MS14413_02029 PF00521 DNA gyrase/topoisomerase IV, subunit A MS14413_02030 PF13193 AMP-binding enzyme C-terminal domain MS14413_02030 PF00501 AMP-binding enzyme MS14413_02033 PF00719 Inorganic pyrophosphatase MS14413_02034 PF03573 outer membrane porin, OprD family MS14413_02037 PF00701 Dihydrodipicolinate synthetase family MS14413_02039 PF00392 Bacterial regulatory proteins, gntR family MS14413_02039 PF00155 Aminotransferase class I and II MS14413_02040 PF13335 Magnesium chelatase, subunit ChlI C-terminal MS14413_02040 PF01078 Magnesium chelatase, subunit ChlI MS14413_02042 PF00665 Integrase core domain MS14413_02046 PF00582 Universal stress protein family MS14413_02047 PF00916 Sulfate permease family MS14413_02047 PF01740 STAS domain MS14413_02053 PF00589 Phage integrase family MS14413_02053 PF02899 Phage integrase, N-terminal SAM-like domain MS14413_02058 PF00665 Integrase core domain MS14413_02062 PF00809 Pterin binding enzyme MS14413_02063 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MS14413_02063 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MS14413_02063 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MS14413_02063 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MS14413_02066 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase MS14413_02067 PF01636 Phosphotransferase enzyme family MS14413_02069 PF01078 Magnesium chelatase, subunit ChlI MS14413_02069 PF13335 Magnesium chelatase, subunit ChlI C-terminal MS14413_02071 PF00543 Nitrogen regulatory protein P-II MS14413_02072 PF00909 Ammonium Transporter Family MS14413_02073 PF03477 ATP cone domain MS14413_02074 PF01872 RibD C-terminal domain MS14413_02074 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MS14413_02076 PF00677 Lumazine binding domain MS14413_02080 PF02789 Cytosol aminopeptidase family, N-terminal domain MS14413_02080 PF00883 Cytosol aminopeptidase family, catalytic domain MS14413_02082 PF03739 Lipopolysaccharide export system permease LptF/LptG MS14413_02083 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MS14413_02083 PF01676 Metalloenzyme superfamily MS14413_02084 PF03572 Peptidase family S41 MS14413_02084 PF00595 PDZ domain MS14413_02085 PF00072 Response regulator receiver domain MS14413_02085 PF00158 Sigma-54 interaction domain MS14413_02085 PF02954 Bacterial regulatory protein, Fis family MS14413_02086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_02086 PF00512 His Kinase A (phospho-acceptor) domain MS14413_02087 PF00072 Response regulator receiver domain MS14413_02087 PF00196 Bacterial regulatory proteins, luxR family MS14413_02088 PF00768 D-alanyl-D-alanine carboxypeptidase MS14413_02089 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_02090 PF01842 ACT domain MS14413_02090 PF00742 Homoserine dehydrogenase MS14413_02090 PF03447 Homoserine dehydrogenase, NAD binding domain MS14413_02091 PF10411 Disulfide bond isomerase protein N-terminus MS14413_02091 PF13098 Thioredoxin-like domain MS14413_02092 PF00589 Phage integrase family MS14413_02092 PF02899 Phage integrase, N-terminal SAM-like domain MS14413_02094 PF07670 Nucleoside recognition MS14413_02094 PF02421 Ferrous iron transport protein B MS14413_02094 PF07664 Ferrous iron transport protein B C terminus MS14413_02096 PF02875 Mur ligase family, glutamate ligase domain MS14413_02096 PF08245 Mur ligase middle domain MS14413_02097 PF01098 Cell cycle protein MS14413_02098 PF00749 tRNA synthetases class I (E and Q), catalytic domain MS14413_02099 PF01258 Prokaryotic dksA/traR C4-type zinc finger MS14413_02100 PF00149 Calcineurin-like phosphoesterase MS14413_02101 PF00293 NUDIX domain MS14413_02102 PF01964 Radical SAM ThiC family MS14413_02102 PF13667 ThiC-associated domain MS14413_02105 PF00892 EamA-like transporter family MS14413_02106 PF02321 Outer membrane efflux protein MS14413_02107 PF01895 PhoU domain MS14413_02108 PF04362 Bacterial Fe(2+) trafficking MS14413_02109 PF00206 Lyase MS14413_02109 PF14698 Argininosuccinate lyase C-terminal MS14413_02110 PF07694 5TMR of 5TMR-LYT MS14413_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_02110 PF06580 Histidine kinase MS14413_02111 PF04397 LytTr DNA-binding domain MS14413_02111 PF00072 Response regulator receiver domain MS14413_02112 PF03900 Porphobilinogen deaminase, C-terminal domain MS14413_02112 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MS14413_02117 PF00816 H-NS histone family MS14413_02120 PF03958 Bacterial type II/III secretion system short domain MS14413_02120 PF00263 Bacterial type II and III secretion system protein MS14413_02121 PF00498 FHA domain MS14413_02121 PF12401 Protein of unknown function (DUF2662) MS14413_02122 PF13419 Haloacid dehalogenase-like hydrolase MS14413_02123 PF00425 chorismate binding enzyme MS14413_02123 PF04715 Anthranilate synthase component I, N terminal region MS14413_02128 PF00009 Elongation factor Tu GTP binding domain MS14413_02128 PF03144 Elongation factor Tu domain 2 MS14413_02128 PF03143 Elongation factor Tu C-terminal domain MS14413_02130 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MS14413_02131 PF02357 Transcription termination factor nusG MS14413_02131 PF00467 KOW motif MS14413_02132 PF03946 Ribosomal protein L11, N-terminal domain MS14413_02132 PF00298 Ribosomal protein L11, RNA binding domain MS14413_02133 PF00687 Ribosomal protein L1p/L10e family MS14413_02134 PF00466 Ribosomal protein L10 MS14413_02135 PF16320 Ribosomal protein L7/L12 dimerisation domain MS14413_02135 PF00542 Ribosomal protein L7/L12 C-terminal domain MS14413_02136 PF04560 RNA polymerase Rpb2, domain 7 MS14413_02136 PF04563 RNA polymerase beta subunit MS14413_02136 PF10385 RNA polymerase beta subunit external 1 domain MS14413_02136 PF04561 RNA polymerase Rpb2, domain 2 MS14413_02136 PF04565 RNA polymerase Rpb2, domain 3 MS14413_02136 PF00562 RNA polymerase Rpb2, domain 6 MS14413_02137 PF04997 RNA polymerase Rpb1, domain 1 MS14413_02137 PF00623 RNA polymerase Rpb1, domain 2 MS14413_02137 PF04983 RNA polymerase Rpb1, domain 3 MS14413_02137 PF05000 RNA polymerase Rpb1, domain 4 MS14413_02137 PF04998 RNA polymerase Rpb1, domain 5 MS14413_02141 PF00561 alpha/beta hydrolase fold MS14413_02142 PF03553 Na+/H+ antiporter family MS14413_02142 PF13726 Na+-H+ antiporter family MS14413_02145 PF00183 Hsp90 protein MS14413_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_02148 PF01323 DSBA-like thioredoxin domain MS14413_02150 PF00376 MerR family regulatory protein MS14413_02150 PF09278 MerR, DNA binding MS14413_02154 PF02803 Thiolase, C-terminal domain MS14413_02154 PF00108 Thiolase, N-terminal domain MS14413_02155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MS14413_02155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MS14413_02155 PF00378 Enoyl-CoA hydratase/isomerase MS14413_02160 PF01541 GIY-YIG catalytic domain MS14413_02160 PF08459 UvrC Helix-hairpin-helix N-terminal MS14413_02160 PF02151 UvrB/uvrC motif MS14413_02162 PF01066 CDP-alcohol phosphatidyltransferase MS14413_02163 PF02805 Metal binding domain of Ada MS14413_02163 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MS14413_02163 PF12833 Helix-turn-helix domain MS14413_02163 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MS14413_02168 PF13533 Biotin-lipoyl like MS14413_02169 PF03652 Holliday junction resolvase MS14413_02170 PF02622 Uncharacterized ACR, COG1678 MS14413_02171 PF02463 RecF/RecN/SMC N terminal domain MS14413_02173 PF06865 Pyrimidine/purine nucleoside phosphorylase MS14413_02174 PF00588 SpoU rRNA Methylase family MS14413_02174 PF08032 RNA 2'-O ribose methyltransferase substrate binding MS14413_02176 PF01121 Dephospho-CoA kinase MS14413_02177 PF06750 Bacterial Peptidase A24 N-terminal domain MS14413_02177 PF01478 Type IV leader peptidase family MS14413_02178 PF00482 Type II secretion system (T2SS), protein F MS14413_02179 PF00437 Type II/IV secretion system protein MS14413_02179 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MS14413_02180 PF00121 Triosephosphate isomerase MS14413_02181 PF03840 Preprotein translocase SecG subunit MS14413_02185 PF02576 RimP N-terminal domain MS14413_02185 PF17384 RimP C-terminal SH3 domain MS14413_02186 PF08529 NusA N-terminal domain MS14413_02186 PF00575 S1 RNA binding domain MS14413_02186 PF13184 NusA-like KH domain MS14413_02187 PF04760 Translation initiation factor IF-2, N-terminal region MS14413_02187 PF08364 Bacterial translation initiation factor IF-2 associated region MS14413_02187 PF11987 Translation-initiation factor 2 MS14413_02187 PF00009 Elongation factor Tu GTP binding domain MS14413_02188 PF02033 Ribosome-binding factor A MS14413_02190 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) MS14413_02192 PF00361 Proton-conducting membrane transporter MS14413_02193 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MS14413_02194 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MS14413_02194 PF00361 Proton-conducting membrane transporter MS14413_02194 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter MS14413_02194 PF13244 Domain of unknown function (DUF4040) MS14413_02197 PF01502 Phosphoribosyl-AMP cyclohydrolase MS14413_02198 PF01494 FAD binding domain MS14413_02199 PF03109 ABC1 family MS14413_02201 PF01209 ubiE/COQ5 methyltransferase family MS14413_02203 PF03976 Polyphosphate kinase 2 (PPK2) MS14413_02205 PF17946 RecC C-terminal domain MS14413_02206 PF00580 UvrD/REP helicase N-terminal domain MS14413_02206 PF13361 UvrD-like helicase C-terminal domain MS14413_02206 PF12705 PD-(D/E)XK nuclease superfamily MS14413_02207 PF13538 UvrD-like helicase C-terminal domain MS14413_02209 PF00312 Ribosomal protein S15 MS14413_02210 PF03725 3' exoribonuclease family, domain 2 MS14413_02210 PF00575 S1 RNA binding domain MS14413_02210 PF00013 KH domain MS14413_02210 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MS14413_02210 PF01138 3' exoribonuclease family, domain 1 MS14413_02211 PF01544 CorA-like Mg2+ transporter protein MS14413_02213 PF01556 DnaJ C terminal domain MS14413_02213 PF00226 DnaJ domain MS14413_02215 PF01430 Hsp33 protein MS14413_02216 PF02254 TrkA-N domain MS14413_02216 PF00999 Sodium/hydrogen exchanger family MS14413_02217 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MS14413_02217 PF18074 Primosomal protein N C-terminal domain MS14413_02217 PF17764 3′ DNA-binding domain (3′BD) MS14413_02217 PF00271 Helicase conserved C-terminal domain MS14413_02217 PF00270 DEAD/DEAH box helicase MS14413_02218 PF00482 Type II secretion system (T2SS), protein F MS14413_02219 PF07963 Prokaryotic N-terminal methylation motif MS14413_02219 PF08334 Type II secretion system (T2SS), protein G MS14413_02221 PF01588 Putative tRNA binding domain MS14413_02222 PF00795 Carbon-nitrogen hydrolase MS14413_02223 PF03471 Transporter associated domain MS14413_02223 PF00571 CBS domain MS14413_02224 PF01206 Sulfurtransferase TusA MS14413_02227 PF01177 Asp/Glu/Hydantoin racemase MS14413_02229 PF00762 Ferrochelatase MS14413_02230 PF00753 Metallo-beta-lactamase superfamily MS14413_02231 PF03884 DNA gyrase inhibitor YacG MS14413_02235 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MS14413_02237 PF01197 Ribosomal protein L31 MS14413_02238 PF03109 ABC1 family MS14413_02239 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_02239 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MS14413_02240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MS14413_02240 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_02241 PF01554 MatE MS14413_02243 PF06969 HemN C-terminal domain MS14413_02243 PF04055 Radical SAM superfamily MS14413_02244 PF00106 short chain dehydrogenase MS14413_02245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02245 PF03466 LysR substrate binding domain MS14413_02248 PF13193 AMP-binding enzyme C-terminal domain MS14413_02248 PF00501 AMP-binding enzyme MS14413_02249 PF12111 Polyribonucleotide phosphorylase C terminal MS14413_02249 PF00575 S1 RNA binding domain MS14413_02249 PF10150 Ribonuclease E/G family MS14413_02250 PF00849 RNA pseudouridylate synthase MS14413_02250 PF01479 S4 domain MS14413_02251 PF13419 Haloacid dehalogenase-like hydrolase MS14413_02252 PF13280 WYL domain MS14413_02252 PF08279 HTH domain MS14413_02253 PF02798 Glutathione S-transferase, N-terminal domain MS14413_02255 PF03466 LysR substrate binding domain MS14413_02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02256 PF12706 Beta-lactamase superfamily domain MS14413_02257 PF00141 Peroxidase MS14413_02258 PF00391 PEP-utilising enzyme, mobile domain MS14413_02258 PF02896 PEP-utilising enzyme, TIM barrel domain MS14413_02258 PF01590 GAF domain MS14413_02258 PF05524 PEP-utilising enzyme, N-terminal MS14413_02259 PF00293 NUDIX domain MS14413_02263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02263 PF03466 LysR substrate binding domain MS14413_02265 PF00330 Aconitase family (aconitate hydratase) MS14413_02266 PF00694 Aconitase C-terminal domain MS14413_02268 PF00180 Isocitrate/isopropylmalate dehydrogenase MS14413_02271 PF01176 Translation initiation factor 1A / IF-1 MS14413_02273 PF01416 tRNA pseudouridine synthase MS14413_02277 PF02774 Semialdehyde dehydrogenase, dimerisation domain MS14413_02277 PF01118 Semialdehyde dehydrogenase, NAD binding domain MS14413_02279 PF00375 Sodium:dicarboxylate symporter family MS14413_02281 PF03279 Bacterial lipid A biosynthesis acyltransferase MS14413_02282 PF01810 LysE type translocator MS14413_02284 PF04102 SlyX MS14413_02285 PF00107 Zinc-binding dehydrogenase MS14413_02285 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_02286 PF01638 HxlR-like helix-turn-helix MS14413_02288 PF01396 Topoisomerase DNA binding C4 zinc finger MS14413_02288 PF08272 Topoisomerase I zinc-ribbon-like MS14413_02288 PF01131 DNA topoisomerase MS14413_02288 PF01751 Toprim domain MS14413_02291 PF00580 UvrD/REP helicase N-terminal domain MS14413_02291 PF13361 UvrD-like helicase C-terminal domain MS14413_02292 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MS14413_02296 PF02254 TrkA-N domain MS14413_02296 PF00999 Sodium/hydrogen exchanger family MS14413_02297 PF00471 Ribosomal protein L33 MS14413_02298 PF00830 Ribosomal L28 family MS14413_02299 PF00171 Aldehyde dehydrogenase family MS14413_02301 PF01842 ACT domain MS14413_02301 PF00551 Formyl transferase MS14413_02303 PF01618 MotA/TolQ/ExbB proton channel family MS14413_02305 PF01625 Peptide methionine sulfoxide reductase MS14413_02307 PF00186 Dihydrofolate reductase MS14413_02308 PF00303 Thymidylate synthase MS14413_02311 PF01790 Prolipoprotein diacylglyceryl transferase MS14413_02315 PF00902 Sec-independent protein translocase protein (TatC) MS14413_02316 PF02416 mttA/Hcf106 family MS14413_02317 PF02416 mttA/Hcf106 family MS14413_02319 PF01725 Ham1 family MS14413_02321 PF00561 alpha/beta hydrolase fold MS14413_02321 PF07021 Methionine biosynthesis protein MetW MS14413_02322 PF00561 alpha/beta hydrolase fold MS14413_02323 PF08502 LeuA allosteric (dimerisation) domain MS14413_02323 PF00682 HMGL-like MS14413_02324 PF13640 2OG-Fe(II) oxygenase superfamily MS14413_02324 PF18331 PKHD-type hydroxylase C-terminal domain MS14413_02325 PF07715 TonB-dependent Receptor Plug Domain MS14413_02325 PF00593 TonB dependent receptor MS14413_02326 PF05697 Bacterial trigger factor protein (TF) MS14413_02326 PF05698 Bacterial trigger factor protein (TF) C-terminus MS14413_02326 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MS14413_02327 PF00574 Clp protease MS14413_02328 PF07724 AAA domain (Cdc48 subfamily) MS14413_02328 PF10431 C-terminal, D2-small domain, of ClpB protein MS14413_02328 PF06689 ClpX C4-type zinc finger MS14413_02331 PF05683 Fumarase C-terminus MS14413_02331 PF05681 Fumarate hydratase (Fumerase) MS14413_02332 PF07085 DRTGG domain MS14413_02332 PF01515 Phosphate acetyl/butaryl transferase MS14413_02333 PF00871 Acetokinase family MS14413_02334 PF00920 Dehydratase family MS14413_02335 PF01081 KDPG and KHG aldolase MS14413_02336 PF02447 GntP family permease MS14413_02337 PF01202 Shikimate kinase MS14413_02338 PF00171 Aldehyde dehydrogenase family MS14413_02339 PF00171 Aldehyde dehydrogenase family MS14413_02340 PF00561 alpha/beta hydrolase fold MS14413_02342 PF00933 Glycosyl hydrolase family 3 N terminal domain MS14413_02343 PF17804 Tail specific protease N-terminal domain MS14413_02343 PF03572 Peptidase family S41 MS14413_02343 PF00595 PDZ domain MS14413_02343 PF11818 C-terminal domain of tail specific protease (DUF3340) MS14413_02344 PF00534 Glycosyl transferases group 1 MS14413_02344 PF13439 Glycosyltransferase Family 4 MS14413_02345 PF01569 PAP2 superfamily MS14413_02346 PF04384 Iron-sulphur cluster assembly MS14413_02347 PF00334 Nucleoside diphosphate kinase MS14413_02348 PF04055 Radical SAM superfamily MS14413_02350 PF13464 Domain of unknown function (DUF4115) MS14413_02351 PF04551 GcpE protein MS14413_02352 PF03129 Anticodon binding domain MS14413_02352 PF13393 Histidyl-tRNA synthetase MS14413_02354 PF13360 PQQ-like domain MS14413_02355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MS14413_02355 PF01926 50S ribosome-binding GTPase MS14413_02358 PF00550 Phosphopantetheine attachment site MS14413_02359 PF00550 Phosphopantetheine attachment site MS14413_02361 PF13193 AMP-binding enzyme C-terminal domain MS14413_02361 PF00501 AMP-binding enzyme MS14413_02364 PF00221 Aromatic amino acid lyase MS14413_02368 PF04820 Tryptophan halogenase MS14413_02370 PF02801 Beta-ketoacyl synthase, C-terminal domain MS14413_02370 PF00109 Beta-ketoacyl synthase, N-terminal domain MS14413_02373 PF02801 Beta-ketoacyl synthase, C-terminal domain MS14413_02373 PF00109 Beta-ketoacyl synthase, N-terminal domain MS14413_02376 PF02556 Preprotein translocase subunit SecB MS14413_02377 PF00462 Glutaredoxin MS14413_02379 PF03193 RsgA GTPase MS14413_02380 PF00929 Exonuclease MS14413_02383 PF02321 Outer membrane efflux protein MS14413_02384 PF12704 MacB-like periplasmic core domain MS14413_02384 PF00005 ABC transporter MS14413_02384 PF02687 FtsX-like permease family MS14413_02385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_02388 PF08264 Anticodon-binding domain of tRNA MS14413_02388 PF09334 tRNA synthetases class I (M) MS14413_02388 PF13603 Leucyl-tRNA synthetase, Domain 2 MS14413_02388 PF00133 tRNA synthetases class I (I, L, M and V) MS14413_02390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MS14413_02390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MS14413_02390 PF00205 Thiamine pyrophosphate enzyme, central domain MS14413_02391 PF10369 Small subunit of acetolactate synthase MS14413_02392 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MS14413_02392 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MS14413_02393 PF00990 Diguanylate cyclase, GGDEF domain MS14413_02393 PF00563 EAL domain MS14413_02393 PF03707 Bacterial signalling protein N terminal repeat MS14413_02399 PF16658 Class II release factor RF3, C-terminal domain MS14413_02399 PF00009 Elongation factor Tu GTP binding domain MS14413_02399 PF03144 Elongation factor Tu domain 2 MS14413_02402 PF01026 TatD related DNase MS14413_02403 PF00694 Aconitase C-terminal domain MS14413_02403 PF00330 Aconitase family (aconitate hydratase) MS14413_02405 PF00899 ThiF family MS14413_02406 PF03466 LysR substrate binding domain MS14413_02406 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02408 PF01207 Dihydrouridine synthase (Dus) MS14413_02409 PF07690 Major Facilitator Superfamily MS14413_02411 PF00892 EamA-like transporter family MS14413_02412 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MS14413_02412 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MS14413_02413 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MS14413_02414 PF02233 NAD(P) transhydrogenase beta subunit MS14413_02415 PF00106 short chain dehydrogenase MS14413_02417 PF01261 Xylose isomerase-like TIM barrel MS14413_02418 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MS14413_02418 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MS14413_02419 PF00378 Enoyl-CoA hydratase/isomerase MS14413_02420 PF00072 Response regulator receiver domain MS14413_02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_02420 PF00512 His Kinase A (phospho-acceptor) domain MS14413_02420 PF01627 Hpt domain MS14413_02420 PF00672 HAMP domain MS14413_02420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MS14413_02421 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_02423 PF05958 tRNA (Uracil-5-)-methyltransferase MS14413_02424 PF04607 Region found in RelA / SpoT proteins MS14413_02424 PF13291 ACT domain MS14413_02424 PF02824 TGS domain MS14413_02426 PF03819 MazG nucleotide pyrophosphohydrolase domain MS14413_02428 PF01743 Poly A polymerase head domain MS14413_02428 PF12627 Probable RNA and SrmB- binding site of polymerase A MS14413_02428 PF12626 Polymerase A arginine-rich C-terminus MS14413_02429 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MS14413_02430 PF02548 Ketopantoate hydroxymethyltransferase MS14413_02431 PF02569 Pantoate-beta-alanine ligase MS14413_02432 PF03668 P-loop ATPase protein family MS14413_02433 PF00381 PTS HPr component phosphorylation site MS14413_02434 PF04751 Protein of unknown function (DUF615) MS14413_02435 PF13193 AMP-binding enzyme C-terminal domain MS14413_02435 PF00501 AMP-binding enzyme MS14413_02436 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MS14413_02436 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MS14413_02436 PF02824 TGS domain MS14413_02436 PF03129 Anticodon binding domain MS14413_02437 PF00707 Translation initiation factor IF-3, C-terminal domain MS14413_02437 PF05198 Translation initiation factor IF-3, N-terminal domain MS14413_02438 PF02798 Glutathione S-transferase, N-terminal domain MS14413_02438 PF00043 Glutathione S-transferase, C-terminal domain MS14413_02439 PF09335 SNARE associated Golgi protein MS14413_02440 PF07690 Major Facilitator Superfamily MS14413_02441 PF01632 Ribosomal protein L35 MS14413_02442 PF00453 Ribosomal protein L20 MS14413_02446 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MS14413_02446 PF01409 tRNA synthetases class II core domain (F) MS14413_02447 PF03483 B3/4 domain MS14413_02447 PF03484 tRNA synthetase B5 domain MS14413_02447 PF03147 Ferredoxin-fold anticodon binding domain MS14413_02447 PF01588 Putative tRNA binding domain MS14413_02447 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MS14413_02448 PF00216 Bacterial DNA-binding protein MS14413_02450 PF07497 Rho termination factor, RNA-binding domain MS14413_02450 PF07498 Rho termination factor, N-terminal domain MS14413_02450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MS14413_02451 PF00085 Thioredoxin MS14413_02452 PF02541 Ppx/GppA phosphatase family MS14413_02453 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MS14413_02454 PF11734 TilS substrate C-terminal domain MS14413_02454 PF09179 TilS substrate binding domain MS14413_02454 PF01171 PP-loop family MS14413_02455 PF03807 NADP oxidoreductase coenzyme F420-dependent MS14413_02455 PF14748 Pyrroline-5-carboxylate reductase dimerisation MS14413_02456 PF02325 YGGT family MS14413_02457 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MS14413_02457 PF00476 DNA polymerase family A MS14413_02457 PF01367 5'-3' exonuclease, C-terminal SAM fold MS14413_02457 PF01612 3'-5' exonuclease MS14413_02461 PF00437 Type II/IV secretion system protein MS14413_02462 PF02566 OsmC-like protein MS14413_02463 PF01047 MarR family MS14413_02465 PF00795 Carbon-nitrogen hydrolase MS14413_02474 PF00309 Sigma-54 factor, Activator interacting domain (AID) MS14413_02474 PF04552 Sigma-54, DNA binding domain MS14413_02474 PF04963 Sigma-54 factor, core binding domain MS14413_02475 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MS14413_02476 PF01722 BolA-like protein MS14413_02477 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MS14413_02478 PF01634 ATP phosphoribosyltransferase MS14413_02479 PF00815 Histidinol dehydrogenase MS14413_02480 PF00155 Aminotransferase class I and II MS14413_02481 PF04715 Anthranilate synthase component I, N terminal region MS14413_02481 PF00425 chorismate binding enzyme MS14413_02490 PF00293 NUDIX domain MS14413_02491 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_02492 PF00814 Glycoprotease family MS14413_02493 PF04445 Putative SAM-dependent methyltransferase MS14413_02495 PF00756 Putative esterase MS14413_02497 PF00834 Ribulose-phosphate 3 epimerase family MS14413_02500 PF07732 Multicopper oxidase MS14413_02500 PF07731 Multicopper oxidase MS14413_02500 PF00394 Multicopper oxidase MS14413_02501 PF05275 Copper resistance protein B precursor (CopB) MS14413_02503 PF00893 Small Multidrug Resistance protein MS14413_02504 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MS14413_02504 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MS14413_02505 PF01960 ArgJ family MS14413_02506 PF02445 Quinolinate synthetase A protein MS14413_02511 PF00962 Adenosine/AMP deaminase MS14413_02512 PF00107 Zinc-binding dehydrogenase MS14413_02512 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_02513 PF03466 LysR substrate binding domain MS14413_02513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02514 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_02514 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_02514 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_02515 PF07690 Major Facilitator Superfamily MS14413_02516 PF02515 CoA-transferase family III MS14413_02518 PF14537 Cytochrome c3 MS14413_02518 PF00890 FAD binding domain MS14413_02519 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02519 PF03466 LysR substrate binding domain MS14413_02521 PF07690 Major Facilitator Superfamily MS14413_02522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02522 PF03466 LysR substrate binding domain MS14413_02524 PF07687 Peptidase dimerisation domain MS14413_02524 PF01546 Peptidase family M20/M25/M40 MS14413_02525 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term MS14413_02525 PF12833 Helix-turn-helix domain MS14413_02527 PF01810 LysE type translocator MS14413_02528 PF03466 LysR substrate binding domain MS14413_02528 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02530 PF01717 Cobalamin-independent synthase, Catalytic domain MS14413_02530 PF08267 Cobalamin-independent synthase, N-terminal domain MS14413_02531 PF01613 Flavin reductase like domain MS14413_02536 PF02567 Phenazine biosynthesis-like protein MS14413_02540 PF13360 PQQ-like domain MS14413_02540 PF01011 PQQ enzyme repeat MS14413_02554 PF13755 Sensor N-terminal transmembrane domain MS14413_02554 PF13756 Stimulus-sensing domain MS14413_02554 PF00512 His Kinase A (phospho-acceptor) domain MS14413_02554 PF00672 HAMP domain MS14413_02554 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_02555 PF00268 Ribonucleotide reductase, small chain MS14413_02557 PF02867 Ribonucleotide reductase, barrel domain MS14413_02557 PF03477 ATP cone domain MS14413_02557 PF00317 Ribonucleotide reductase, all-alpha domain MS14413_02558 PF00072 Response regulator receiver domain MS14413_02558 PF00486 Transcriptional regulatory protein, C terminal MS14413_02559 PF00672 HAMP domain MS14413_02559 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_02559 PF00512 His Kinase A (phospho-acceptor) domain MS14413_02561 PF00990 Diguanylate cyclase, GGDEF domain MS14413_02561 PF17151 Periplasmic sensor domain MS14413_02562 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MS14413_02563 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MS14413_02564 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MS14413_02564 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MS14413_02566 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MS14413_02566 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MS14413_02566 PF10531 SLBB domain MS14413_02567 PF00384 Molybdopterin oxidoreductase MS14413_02567 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MS14413_02567 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MS14413_02568 PF00146 NADH dehydrogenase MS14413_02569 PF12838 4Fe-4S dicluster domain MS14413_02570 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MS14413_02571 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MS14413_02572 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MS14413_02572 PF00361 Proton-conducting membrane transporter MS14413_02573 PF00361 Proton-conducting membrane transporter MS14413_02574 PF00361 Proton-conducting membrane transporter MS14413_02576 PF00313 'Cold-shock' DNA-binding domain MS14413_02577 PF03466 LysR substrate binding domain MS14413_02577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02578 PF00175 Oxidoreductase NAD-binding domain MS14413_02578 PF00970 Oxidoreductase FAD-binding domain MS14413_02581 PF05552 Conserved TM helix MS14413_02584 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_02585 PF13533 Biotin-lipoyl like MS14413_02590 PF01588 Putative tRNA binding domain MS14413_02590 PF09334 tRNA synthetases class I (M) MS14413_02592 PF10609 NUBPL iron-transfer P-loop NTPase MS14413_02593 PF01048 Phosphorylase superfamily MS14413_02596 PF00692 dUTPase MS14413_02602 PF01207 Dihydrouridine synthase (Dus) MS14413_02604 PF02978 Signal peptide binding domain MS14413_02604 PF02881 SRP54-type protein, helical bundle domain MS14413_02604 PF00448 SRP54-type protein, GTPase domain MS14413_02605 PF03309 Type III pantothenate kinase MS14413_02607 PF01925 Sulfite exporter TauE/SafE MS14413_02609 PF06470 SMC proteins Flexible Hinge Domain MS14413_02609 PF02463 RecF/RecN/SMC N terminal domain MS14413_02611 PF12826 Helix-hairpin-helix motif MS14413_02611 PF03120 NAD-dependent DNA ligase OB-fold domain MS14413_02611 PF01653 NAD-dependent DNA ligase adenylation domain MS14413_02611 PF00533 BRCA1 C Terminus (BRCT) domain MS14413_02611 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MS14413_02612 PF00210 Ferritin-like domain MS14413_02613 PF07690 Major Facilitator Superfamily MS14413_02614 PF00982 Glycosyltransferase family 20 MS14413_02615 PF02358 Trehalose-phosphatase MS14413_02616 PF08241 Methyltransferase domain MS14413_02616 PF12697 Alpha/beta hydrolase family MS14413_02617 PF04055 Radical SAM superfamily MS14413_02617 PF06968 Biotin and Thiamin Synthesis associated domain MS14413_02617 PF00202 Aminotransferase class-III MS14413_02618 PF00155 Aminotransferase class I and II MS14413_02621 PF00849 RNA pseudouridylate synthase MS14413_02621 PF01479 S4 domain MS14413_02622 PF04079 Segregation and condensation complex subunit ScpB MS14413_02623 PF02616 Segregation and condensation protein ScpA MS14413_02624 PF01300 Telomere recombination MS14413_02625 PF04315 Elongation factor P hydroxylase MS14413_02626 PF02620 Large ribosomal RNA subunit accumulation protein YceD MS14413_02627 PF01783 Ribosomal L32p protein family MS14413_02628 PF00698 Acyl transferase domain MS14413_02630 PF00550 Phosphopantetheine attachment site MS14413_02631 PF01476 LysM domain MS14413_02631 PF04972 BON domain MS14413_02632 PF08543 Phosphomethylpyrimidine kinase MS14413_02632 PF02581 Thiamine monophosphate synthase MS14413_02632 PF03070 TENA/THI-4/PQQC family MS14413_02634 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MS14413_02637 PF02261 Aspartate decarboxylase MS14413_02638 PF01195 Peptidyl-tRNA hydrolase MS14413_02639 PF01386 Ribosomal L25p family MS14413_02640 PF14572 Phosphoribosyl synthetase-associated domain MS14413_02640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MS14413_02645 PF03550 Outer membrane lipoprotein LolB MS14413_02647 PF01488 Shikimate / quinate 5-dehydrogenase MS14413_02647 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MS14413_02647 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MS14413_02648 PF10410 DnaB-helicase binding domain of primase MS14413_02648 PF01807 CHC2 zinc finger MS14413_02648 PF08275 DNA primase catalytic core, N-terminal domain MS14413_02648 PF08278 DNA primase DnaG DnaB-binding MS14413_02649 PF13525 Outer membrane lipoprotein MS14413_02650 PF01479 S4 domain MS14413_02650 PF00849 RNA pseudouridylate synthase MS14413_02652 PF03358 NADPH-dependent FMN reductase MS14413_02653 PF01668 SmpB protein MS14413_02654 PF01467 Cytidylyltransferase-like MS14413_02655 PF00037 4Fe-4S binding domain MS14413_02658 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02658 PF03466 LysR substrate binding domain MS14413_02659 PF00180 Isocitrate/isopropylmalate dehydrogenase MS14413_02660 PF02028 BCCT, betaine/carnitine/choline family transporter MS14413_02661 PF07859 alpha/beta hydrolase fold MS14413_02662 PF00848 Ring hydroxylating alpha subunit (catalytic domain) MS14413_02662 PF00355 Rieske [2Fe-2S] domain MS14413_02663 PF00171 Aldehyde dehydrogenase family MS14413_02664 PF00970 Oxidoreductase FAD-binding domain MS14413_02664 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_02664 PF00175 Oxidoreductase NAD-binding domain MS14413_02667 PF02540 NAD synthase MS14413_02667 PF00795 Carbon-nitrogen hydrolase MS14413_02669 PF05726 Pirin C-terminal cupin domain MS14413_02669 PF02678 Pirin MS14413_02671 PF00109 Beta-ketoacyl synthase, N-terminal domain MS14413_02671 PF02801 Beta-ketoacyl synthase, C-terminal domain MS14413_02673 PF00164 Ribosomal protein S12/S23 MS14413_02674 PF00177 Ribosomal protein S7p/S5e MS14413_02675 PF03144 Elongation factor Tu domain 2 MS14413_02675 PF14492 Elongation Factor G, domain II MS14413_02675 PF03764 Elongation factor G, domain IV MS14413_02675 PF00679 Elongation factor G C-terminus MS14413_02675 PF00009 Elongation factor Tu GTP binding domain MS14413_02676 PF03143 Elongation factor Tu C-terminal domain MS14413_02676 PF00009 Elongation factor Tu GTP binding domain MS14413_02676 PF03144 Elongation factor Tu domain 2 MS14413_02679 PF00583 Acetyltransferase (GNAT) family MS14413_02680 PF04377 Arginine-tRNA-protein transferase, C terminus MS14413_02680 PF04376 Arginine-tRNA-protein transferase, N terminus MS14413_02681 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MS14413_02682 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_02683 PF17854 FtsK alpha domain MS14413_02683 PF09397 Ftsk gamma domain MS14413_02683 PF01580 FtsK/SpoIIIE family MS14413_02683 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MS14413_02684 PF01810 LysE type translocator MS14413_02687 PF03776 Septum formation topological specificity factor MinE MS14413_02688 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MS14413_02689 PF03775 Septum formation inhibitor MinC, C-terminal domain MS14413_02691 PF01553 Acyltransferase MS14413_02692 PF00691 OmpA family MS14413_02692 PF13488 Glycine zipper MS14413_02694 PF13361 UvrD-like helicase C-terminal domain MS14413_02694 PF00580 UvrD/REP helicase N-terminal domain MS14413_02695 PF00692 dUTPase MS14413_02696 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MS14413_02696 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MS14413_02696 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MS14413_02696 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MS14413_02697 PF00696 Amino acid kinase family MS14413_02699 PF13230 Glutamine amidotransferases class-II MS14413_02700 PF01814 Hemerythrin HHE cation binding domain MS14413_02702 PF03658 RnfH family Ubiquitin MS14413_02703 PF04355 SmpA / OmlA family MS14413_02704 PF01475 Ferric uptake regulator family MS14413_02705 PF00437 Type II/IV secretion system protein MS14413_02706 PF00437 Type II/IV secretion system protein MS14413_02707 PF01168 Alanine racemase, N-terminal domain MS14413_02709 PF12320 Type 5 capsule protein repressor C-terminal domain MS14413_02709 PF00149 Calcineurin-like phosphoesterase MS14413_02713 PF01370 NAD dependent epimerase/dehydratase family MS14413_02713 PF08338 Domain of unknown function (DUF1731) MS14413_02714 PF01266 FAD dependent oxidoreductase MS14413_02715 PF00490 Delta-aminolevulinic acid dehydratase MS14413_02716 PF03061 Thioesterase superfamily MS14413_02717 PF13533 Biotin-lipoyl like MS14413_02718 PF07690 Major Facilitator Superfamily MS14413_02733 PF00929 Exonuclease MS14413_02740 PF00717 Peptidase S24-like MS14413_02740 PF01381 Helix-turn-helix MS14413_02749 PF00145 C-5 cytosine-specific DNA methylase MS14413_02751 PF01695 IstB-like ATP binding protein MS14413_02760 PF07007 Lysozyme inhibitor LprI MS14413_02789 PF05016 ParE toxin of type II toxin-antitoxin system, parDE MS14413_02797 PF02767 DNA polymerase III beta subunit, central domain MS14413_02797 PF00712 DNA polymerase III beta subunit, N-terminal domain MS14413_02797 PF02768 DNA polymerase III beta subunit, C-terminal domain MS14413_02815 PF07693 KAP family P-loop domain MS14413_02818 PF01026 TatD related DNase MS14413_02823 PF00083 Sugar (and other) transporter MS14413_02824 PF00701 Dihydrodipicolinate synthetase family MS14413_02826 PF08281 Sigma-70, region 4 MS14413_02826 PF04542 Sigma-70 region 2 MS14413_02828 PF00593 TonB dependent receptor MS14413_02828 PF07715 TonB-dependent Receptor Plug Domain MS14413_02832 PF01126 Heme oxygenase MS14413_02837 PF13520 Amino acid permease MS14413_02838 PF02574 Homocysteine S-methyltransferase MS14413_02840 PF06039 Malate:quinone oxidoreductase (Mqo) MS14413_02841 PF00732 GMC oxidoreductase MS14413_02841 PF05199 GMC oxidoreductase MS14413_02842 PF00171 Aldehyde dehydrogenase family MS14413_02843 PF00440 Bacterial regulatory proteins, tetR family MS14413_02843 PF13977 BetI-type transcriptional repressor, C-terminal MS14413_02844 PF02028 BCCT, betaine/carnitine/choline family transporter MS14413_02845 PF02028 BCCT, betaine/carnitine/choline family transporter MS14413_02847 PF03061 Thioesterase superfamily MS14413_02849 PF02492 CobW/HypB/UreG, nucleotide-binding domain MS14413_02849 PF07683 Cobalamin synthesis protein cobW C-terminal domain MS14413_02850 PF00375 Sodium:dicarboxylate symporter family MS14413_02851 PF07152 YaeQ protein MS14413_02852 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MS14413_02853 PF01522 Polysaccharide deacetylase MS14413_02853 PF14883 Hypothetical glycosyl hydrolase family 13 MS14413_02854 PF00535 Glycosyl transferase family 2 MS14413_02856 PF00378 Enoyl-CoA hydratase/isomerase MS14413_02859 PF09339 IclR helix-turn-helix domain MS14413_02859 PF01614 Bacterial transcriptional regulator MS14413_02860 PF00355 Rieske [2Fe-2S] domain MS14413_02862 PF00355 Rieske [2Fe-2S] domain MS14413_02864 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MS14413_02865 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_02865 PF14759 Reductase C-terminal MS14413_02866 PF07690 Major Facilitator Superfamily MS14413_02868 PF12697 Alpha/beta hydrolase family MS14413_02870 PF03447 Homoserine dehydrogenase, NAD binding domain MS14413_02870 PF01958 Domain of unknown function DUF108 MS14413_02871 PF00171 Aldehyde dehydrogenase family MS14413_02872 PF00205 Thiamine pyrophosphate enzyme, central domain MS14413_02872 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MS14413_02872 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MS14413_02874 PF07690 Major Facilitator Superfamily MS14413_02876 PF01327 Polypeptide deformylase MS14413_02877 PF04960 Glutaminase MS14413_02878 PF12833 Helix-turn-helix domain MS14413_02878 PF02311 AraC-like ligand binding domain MS14413_02879 PF07690 Major Facilitator Superfamily MS14413_02880 PF01263 Aldose 1-epimerase MS14413_02882 PF03466 LysR substrate binding domain MS14413_02882 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02884 PF07690 Major Facilitator Superfamily MS14413_02885 PF00456 Transketolase, thiamine diphosphate binding domain MS14413_02886 PF02779 Transketolase, pyrimidine binding domain MS14413_02886 PF02780 Transketolase, C-terminal domain MS14413_02887 PF02574 Homocysteine S-methyltransferase MS14413_02887 PF00809 Pterin binding enzyme MS14413_02887 PF02965 Vitamin B12 dependent methionine synthase, activation domain MS14413_02887 PF02310 B12 binding domain MS14413_02887 PF02607 B12 binding domain MS14413_02888 PF01384 Phosphate transporter family MS14413_02889 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_02892 PF03781 Sulfatase-modifying factor enzyme 1 MS14413_02893 PF00884 Sulfatase MS14413_02895 PF01106 NifU-like domain MS14413_02895 PF01521 Iron-sulphur cluster biosynthesis MS14413_02896 PF00593 TonB dependent receptor MS14413_02896 PF07715 TonB-dependent Receptor Plug Domain MS14413_02898 PF00561 alpha/beta hydrolase fold MS14413_02899 PF00484 Carbonic anhydrase MS14413_02900 PF13472 GDSL-like Lipase/Acylhydrolase family MS14413_02901 PF00005 ABC transporter MS14413_02903 PF01694 Rhomboid family MS14413_02904 PF00912 Transglycosylase MS14413_02905 PF13089 Polyphosphate kinase N-terminal domain MS14413_02905 PF17941 Polyphosphate kinase C-terminal domain 1 MS14413_02905 PF13090 Polyphosphate kinase C-terminal domain 2 MS14413_02905 PF02503 Polyphosphate kinase middle domain MS14413_02907 PF03466 LysR substrate binding domain MS14413_02907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02908 PF00561 alpha/beta hydrolase fold MS14413_02909 PF18113 Rubredoxin binding C-terminal domain MS14413_02909 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_02910 PF00301 Rubredoxin MS14413_02913 PF00152 tRNA synthetases class II (D, K and N) MS14413_02913 PF01336 OB-fold nucleic acid binding domain MS14413_02914 PF14052 Capsule assembly protein Wzi MS14413_02916 PF01507 Phosphoadenosine phosphosulfate reductase family MS14413_02917 PF00009 Elongation factor Tu GTP binding domain MS14413_02920 PF03600 Citrate transporter MS14413_02921 PF00571 CBS domain MS14413_02921 PF03471 Transporter associated domain MS14413_02921 PF01595 Cyclin M transmembrane N-terminal domain MS14413_02922 PF03466 LysR substrate binding domain MS14413_02922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_02923 PF00463 Isocitrate lyase family MS14413_02926 PF01774 UreD urease accessory protein MS14413_02927 PF00547 Urease, gamma subunit MS14413_02928 PF00699 Urease beta subunit MS14413_02929 PF01979 Amidohydrolase family MS14413_02929 PF00449 Urease alpha-subunit, N-terminal domain MS14413_02930 PF05194 UreE urease accessory protein, C-terminal domain MS14413_02930 PF02814 UreE urease accessory protein, N-terminal domain MS14413_02931 PF01730 UreF MS14413_02932 PF02492 CobW/HypB/UreG, nucleotide-binding domain MS14413_02935 PF00905 Penicillin binding protein transpeptidase domain MS14413_02935 PF03717 Penicillin-binding Protein dimerisation domain MS14413_02938 PF05191 Adenylate kinase, active site lid MS14413_02939 PF00730 HhH-GPD superfamily base excision DNA repair protein MS14413_02939 PF10576 Iron-sulfur binding domain of endonuclease III MS14413_02939 PF00633 Helix-hairpin-helix motif MS14413_02940 PF04060 Putative Fe-S cluster MS14413_02941 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MS14413_02941 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MS14413_02943 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MS14413_02944 PF02590 Predicted SPOUT methyltransferase MS14413_02945 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_02945 PF05362 Lon protease (S16) C-terminal proteolytic domain MS14413_02945 PF02190 ATP-dependent protease La (LON) substrate-binding domain MS14413_02946 PF13018 Extended Signal Peptide of Type V secretion system MS14413_02946 PF05658 Head domain of trimeric autotransporter adhesin MS14413_02946 PF05662 Coiled stalk of trimeric autotransporter adhesin MS14413_02946 PF03895 YadA-like membrane anchor domain MS14413_02948 PF01812 5-formyltetrahydrofolate cyclo-ligase family MS14413_03013 PF01551 Peptidase family M23 MS14413_03013 PF01476 LysM domain MS14413_03013 PF08525 Opacity-associated protein A N-terminal motif MS14413_03022 PF00884 Sulfatase MS14413_03022 PF08019 Phosphoethanolamine transferase EptA/EptB MS14413_03033 PF01726 LexA DNA binding domain MS14413_03033 PF00717 Peptidase S24-like MS14413_03037 PF03796 DnaB-like helicase C terminal domain MS14413_03037 PF00772 DnaB-like helicase N terminal domain MS14413_03057 PF04860 Phage portal protein MS14413_03069 PF01464 Transglycosylase SLT domain MS14413_03069 PF01551 Peptidase family M23 MS14413_03069 PF10145 Phage-related minor tail protein MS14413_03084 PF00557 Metallopeptidase family M24 MS14413_03084 PF05195 Aminopeptidase P, N-terminal domain MS14413_03085 PF01494 FAD binding domain MS14413_03086 PF01494 FAD binding domain MS14413_03088 PF13411 MerR HTH family regulatory protein MS14413_03090 PF01810 LysE type translocator MS14413_03091 PF03466 LysR substrate binding domain MS14413_03091 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03093 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MS14413_03094 PF02021 Uncharacterised protein family UPF0102 MS14413_03095 PF04972 BON domain MS14413_03097 PF09297 NADH pyrophosphatase zinc ribbon domain MS14413_03097 PF00293 NUDIX domain MS14413_03099 PF00929 Exonuclease MS14413_03100 PF01464 Transglycosylase SLT domain MS14413_03100 PF01476 LysM domain MS14413_03100 PF01464 Transglycosylase SLT domain MS14413_03100 PF01476 LysM domain MS14413_03101 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MS14413_03102 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03103 PF12911 N-terminal TM domain of oligopeptide transport permease C MS14413_03103 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03104 PF00005 ABC transporter MS14413_03104 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MS14413_03105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MS14413_03105 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03106 PF00593 TonB dependent receptor MS14413_03106 PF07715 TonB-dependent Receptor Plug Domain MS14413_03108 PF00929 Exonuclease MS14413_03109 PF01979 Amidohydrolase family MS14413_03110 PF00990 Diguanylate cyclase, GGDEF domain MS14413_03110 PF01590 GAF domain MS14413_03110 PF00563 EAL domain MS14413_03110 PF00360 Phytochrome region MS14413_03111 PF00764 Arginosuccinate synthase MS14413_03112 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03112 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MS14413_03115 PF05987 Bacterial protein of unknown function (DUF898) MS14413_03116 PF03180 NLPA lipoprotein MS14413_03119 PF04717 Type VI secretion system, phage-baseplate injector MS14413_03119 PF16671 Actin cross-linking domain MS14413_03121 PF13610 DDE domain MS14413_03123 PF01636 Phosphotransferase enzyme family MS14413_03124 PF13610 DDE domain MS14413_03125 PF13495 Phage integrase, N-terminal SAM-like domain MS14413_03125 PF00589 Phage integrase family MS14413_03127 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_03128 PF01909 Nucleotidyltransferase domain MS14413_03128 PF13427 Domain of unknown function (DUF4111) MS14413_03129 PF00893 Small Multidrug Resistance protein MS14413_03130 PF00809 Pterin binding enzyme MS14413_03132 PF13737 Transposase DDE domain MS14413_03133 PF07091 Ribosomal RNA methyltransferase (FmrO) MS14413_03137 PF01636 Phosphotransferase enzyme family MS14413_03139 PF13817 IS66 C-terminal element MS14413_03139 PF13007 Transposase C of IS166 homeodomain MS14413_03139 PF03050 Transposase IS66 family MS14413_03139 PF13005 zinc-finger binding domain of transposase IS66 MS14413_03143 PF01051 Initiator Replication protein MS14413_03144 PF13610 DDE domain MS14413_03147 PF00375 Sodium:dicarboxylate symporter family MS14413_03149 PF16123 Hydroxyacylglutathione hydrolase C-terminus MS14413_03149 PF00753 Metallo-beta-lactamase superfamily MS14413_03150 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03151 PF09383 NIL domain MS14413_03151 PF00005 ABC transporter MS14413_03152 PF03180 NLPA lipoprotein MS14413_03153 PF02844 Phosphoribosylglycinamide synthetase, N domain MS14413_03153 PF02843 Phosphoribosylglycinamide synthetase, C domain MS14413_03153 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MS14413_03154 PF01808 AICARFT/IMPCHase bienzyme MS14413_03154 PF02142 MGS-like domain MS14413_03155 PF02954 Bacterial regulatory protein, Fis family MS14413_03159 PF13932 GidA associated domain MS14413_03159 PF01134 Glucose inhibited division protein A MS14413_03161 PF14403 Circularly permuted ATP-grasp type 2 MS14413_03163 PF01841 Transglutaminase-like superfamily MS14413_03163 PF08379 Bacterial transglutaminase-like N-terminal region MS14413_03165 PF01168 Alanine racemase, N-terminal domain MS14413_03165 PF00842 Alanine racemase, C-terminal domain MS14413_03166 PF03796 DnaB-like helicase C terminal domain MS14413_03166 PF00772 DnaB-like helicase N terminal domain MS14413_03167 PF03948 Ribosomal protein L9, C-terminal domain MS14413_03167 PF01281 Ribosomal protein L9, N-terminal domain MS14413_03168 PF01084 Ribosomal protein S18 MS14413_03169 PF01250 Ribosomal protein S6 MS14413_03170 PF01040 UbiA prenyltransferase family MS14413_03171 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MS14413_03172 PF00510 Cytochrome c oxidase subunit III MS14413_03173 PF00115 Cytochrome C and Quinol oxidase polypeptide I MS14413_03174 PF06481 COX Aromatic Rich Motif MS14413_03174 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MS14413_03176 PF00391 PEP-utilising enzyme, mobile domain MS14413_03176 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MS14413_03176 PF02896 PEP-utilising enzyme, TIM barrel domain MS14413_03177 PF03618 Kinase/pyrophosphorylase MS14413_03179 PF01522 Polysaccharide deacetylase MS14413_03179 PF14883 Hypothetical glycosyl hydrolase family 13 MS14413_03180 PF00535 Glycosyl transferase family 2 MS14413_03181 PF13994 PgaD-like protein MS14413_03183 PF00296 Luciferase-like monooxygenase MS14413_03186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03186 PF03466 LysR substrate binding domain MS14413_03188 PF00472 RF-1 domain MS14413_03188 PF03462 PCRF domain MS14413_03189 PF17827 PrmC N-terminal domain MS14413_03189 PF13847 Methyltransferase domain MS14413_03190 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03191 PF09084 NMT1/THI5 like MS14413_03192 PF12833 Helix-turn-helix domain MS14413_03193 PF00106 short chain dehydrogenase MS14413_03194 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_03194 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_03194 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_03195 PF13193 AMP-binding enzyme C-terminal domain MS14413_03195 PF00501 AMP-binding enzyme MS14413_03196 PF01613 Flavin reductase like domain MS14413_03197 PF00899 ThiF family MS14413_03198 PF03109 ABC1 family MS14413_03201 PF03814 Potassium-transporting ATPase A subunit MS14413_03203 PF02669 K+-transporting ATPase, c chain MS14413_03204 PF02702 Osmosensitive K+ channel His kinase sensor domain MS14413_03204 PF00512 His Kinase A (phospho-acceptor) domain MS14413_03204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_03204 PF13493 Domain of unknown function (DUF4118) MS14413_03205 PF00486 Transcriptional regulatory protein, C terminal MS14413_03205 PF00072 Response regulator receiver domain MS14413_03206 PF00120 Glutamine synthetase, catalytic domain MS14413_03208 PF03232 Ubiquinone biosynthesis protein COQ7 MS14413_03209 PF07690 Major Facilitator Superfamily MS14413_03210 PF01103 Surface antigen MS14413_03210 PF17243 POTRA domain TamA domain 1 MS14413_03210 PF07244 Surface antigen variable number repeat MS14413_03213 PF11791 Aconitate B N-terminal domain MS14413_03213 PF00330 Aconitase family (aconitate hydratase) MS14413_03213 PF06434 Aconitate hydratase 2 N-terminus MS14413_03215 PF00027 Cyclic nucleotide-binding domain MS14413_03215 PF00520 Ion transport protein MS14413_03216 PF07690 Major Facilitator Superfamily MS14413_03219 PF03466 LysR substrate binding domain MS14413_03219 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03220 PF04284 Protein of unknown function (DUF441) MS14413_03222 PF01479 S4 domain MS14413_03222 PF00849 RNA pseudouridylate synthase MS14413_03225 PF01479 S4 domain MS14413_03225 PF00849 RNA pseudouridylate synthase MS14413_03226 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MS14413_03227 PF01119 DNA mismatch repair protein, C-terminal domain MS14413_03227 PF08676 MutL C terminal dimerisation domain MS14413_03229 PF17209 Hfq protein MS14413_03231 PF00881 Nitroreductase family MS14413_03233 PF00149 Calcineurin-like phosphoesterase MS14413_03234 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MS14413_03235 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MS14413_03235 PF00749 tRNA synthetases class I (E and Q), catalytic domain MS14413_03236 PF00117 Glutamine amidotransferase class-I MS14413_03236 PF02540 NAD synthase MS14413_03236 PF00958 GMP synthase C terminal domain MS14413_03237 PF05985 Ethanolamine ammonia-lyase light chain (EutC) MS14413_03238 PF06751 Ethanolamine ammonia lyase large subunit (EutB) MS14413_03239 PF13520 Amino acid permease MS14413_03240 PF00171 Aldehyde dehydrogenase family MS14413_03243 PF00465 Iron-containing alcohol dehydrogenase MS14413_03244 PF14493 Helix-turn-helix domain MS14413_03244 PF05970 PIF1-like helicase MS14413_03246 PF06445 GyrI-like small molecule binding domain MS14413_03247 PF02110 Hydroxyethylthiazole kinase family MS14413_03250 PF01433 Peptidase family M1 domain MS14413_03250 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MS14413_03250 PF11940 Domain of unknown function (DUF3458) Ig-like fold MS14413_03252 PF00106 short chain dehydrogenase MS14413_03254 PF01817 Chorismate mutase type II MS14413_03255 PF01037 Lrp/AsnC ligand binding domain MS14413_03257 PF00440 Bacterial regulatory proteins, tetR family MS14413_03258 PF07715 TonB-dependent Receptor Plug Domain MS14413_03258 PF00593 TonB dependent receptor MS14413_03259 PF00924 Mechanosensitive ion channel MS14413_03267 PF07715 TonB-dependent Receptor Plug Domain MS14413_03267 PF00593 TonB dependent receptor MS14413_03271 PF12848 ABC transporter MS14413_03271 PF00005 ABC transporter MS14413_03272 PF00582 Universal stress protein family MS14413_03277 PF00690 Cation transporter/ATPase, N-terminus MS14413_03277 PF00689 Cation transporting ATPase, C-terminus MS14413_03278 PF02308 MgtC family MS14413_03279 PF03594 Benzoate membrane transport protein MS14413_03280 PF01037 Lrp/AsnC ligand binding domain MS14413_03281 PF01810 LysE type translocator MS14413_03282 PF00923 Transaldolase/Fructose-6-phosphate aldolase MS14413_03283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03283 PF03466 LysR substrate binding domain MS14413_03285 PF00108 Thiolase, N-terminal domain MS14413_03285 PF02803 Thiolase, C-terminal domain MS14413_03287 PF01575 MaoC like domain MS14413_03290 PF07690 Major Facilitator Superfamily MS14413_03291 PF12169 DNA polymerase III subunits gamma and tau domain III MS14413_03291 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MS14413_03291 PF12170 DNA polymerase III tau subunit V interacting with alpha MS14413_03293 PF04185 Phosphoesterase family MS14413_03293 PF05506 Domain of unknown function (DUF756) MS14413_03294 PF03061 Thioesterase superfamily MS14413_03295 PF00465 Iron-containing alcohol dehydrogenase MS14413_03297 PF01451 Low molecular weight phosphotyrosine protein phosphatase MS14413_03298 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MS14413_03298 PF01565 FAD binding domain MS14413_03301 PF01645 Conserved region in glutamate synthase MS14413_03317 PF12161 HsdM N-terminal domain MS14413_03317 PF02384 N-6 DNA Methylase MS14413_03324 PF00772 DnaB-like helicase N terminal domain MS14413_03324 PF03796 DnaB-like helicase C terminal domain MS14413_03329 PF00149 Calcineurin-like phosphoesterase MS14413_03362 PF01551 Peptidase family M23 MS14413_03362 PF08525 Opacity-associated protein A N-terminal motif MS14413_03362 PF01476 LysM domain MS14413_03375 PF08019 Phosphoethanolamine transferase EptA/EptB MS14413_03375 PF00884 Sulfatase MS14413_03377 PF12832 MFS_1 like family MS14413_03379 PF02785 Biotin carboxylase C-terminal domain MS14413_03379 PF00289 Biotin carboxylase, N-terminal domain MS14413_03379 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MS14413_03380 PF00364 Biotin-requiring enzyme MS14413_03381 PF01220 Dehydroquinase class II MS14413_03382 PF11799 impB/mucB/samB family C-terminal domain MS14413_03382 PF00817 impB/mucB/samB family MS14413_03382 PF13438 Domain of unknown function (DUF4113) MS14413_03383 PF00005 ABC transporter MS14413_03384 PF00486 Transcriptional regulatory protein, C terminal MS14413_03384 PF00072 Response regulator receiver domain MS14413_03386 PF13806 Rieske-like [2Fe-2S] domain MS14413_03386 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03386 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MS14413_03386 PF18267 Rubredoxin NAD+ reductase C-terminal domain MS14413_03386 PF04324 BFD-like [2Fe-2S] binding domain MS14413_03386 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MS14413_03387 PF18267 Rubredoxin NAD+ reductase C-terminal domain MS14413_03387 PF04324 BFD-like [2Fe-2S] binding domain MS14413_03387 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03387 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MS14413_03387 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MS14413_03388 PF04324 BFD-like [2Fe-2S] binding domain MS14413_03388 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MS14413_03388 PF00384 Molybdopterin oxidoreductase MS14413_03388 PF01568 Molydopterin dinucleotide binding domain MS14413_03389 PF12804 MobA-like NTP transferase domain MS14413_03390 PF00384 Molybdopterin oxidoreductase MS14413_03390 PF01568 Molydopterin dinucleotide binding domain MS14413_03390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MS14413_03391 PF04055 Radical SAM superfamily MS14413_03391 PF06463 Molybdenum Cofactor Synthesis C MS14413_03393 PF02391 MoaE protein MS14413_03394 PF01967 MoaC family MS14413_03394 PF00994 Probable molybdopterin binding domain MS14413_03395 PF03454 MoeA C-terminal region (domain IV) MS14413_03395 PF03453 MoeA N-terminal region (domain I and II) MS14413_03395 PF00994 Probable molybdopterin binding domain MS14413_03396 PF01638 HxlR-like helix-turn-helix MS14413_03397 PF00155 Aminotransferase class I and II MS14413_03397 PF00392 Bacterial regulatory proteins, gntR family MS14413_03398 PF00892 EamA-like transporter family MS14413_03402 PF02635 DsrE/DsrF-like family MS14413_03403 PF16363 GDP-mannose 4,6 dehydratase MS14413_03404 PF10415 Fumarase C C-terminus MS14413_03404 PF00206 Lyase MS14413_03408 PF01266 FAD dependent oxidoreductase MS14413_03410 PF02542 YgbB family MS14413_03412 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MS14413_03412 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MS14413_03413 PF00440 Bacterial regulatory proteins, tetR family MS14413_03414 PF00072 Response regulator receiver domain MS14413_03414 PF00158 Sigma-54 interaction domain MS14413_03414 PF02954 Bacterial regulatory protein, Fis family MS14413_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_03415 PF00989 PAS fold MS14413_03415 PF00512 His Kinase A (phospho-acceptor) domain MS14413_03416 PF04055 Radical SAM superfamily MS14413_03416 PF18693 TRAM domain MS14413_03416 PF00919 Uncharacterized protein family UPF0004 MS14413_03417 PF00696 Amino acid kinase family MS14413_03418 PF01765 Ribosome recycling factor MS14413_03419 PF01255 Putative undecaprenyl diphosphate synthase MS14413_03421 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MS14413_03421 PF13288 DXP reductoisomerase C-terminal domain MS14413_03421 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MS14413_03422 PF02163 Peptidase family M50 MS14413_03422 PF13180 PDZ domain MS14413_03422 PF17820 PDZ domain MS14413_03423 PF07244 Surface antigen variable number repeat MS14413_03423 PF01103 Surface antigen MS14413_03425 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_03425 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MS14413_03426 PF07977 FabA-like domain MS14413_03427 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MS14413_03427 PF00132 Bacterial transferase hexapeptide (six repeats) MS14413_03429 PF02631 RecX family MS14413_03430 PF00154 recA bacterial DNA recombination protein MS14413_03431 PF01479 S4 domain MS14413_03432 PF13419 Haloacid dehalogenase-like hydrolase MS14413_03437 PF01037 Lrp/AsnC ligand binding domain MS14413_03438 PF00266 Aminotransferase class-V MS14413_03439 PF00324 Amino acid permease MS14413_03442 PF00324 Amino acid permease MS14413_03445 PF00082 Subtilase family MS14413_03445 PF05922 Peptidase inhibitor I9 MS14413_03446 PF00916 Sulfate permease family MS14413_03446 PF01740 STAS domain MS14413_03447 PF02586 SOS response associated peptidase (SRAP) MS14413_03448 PF07995 Glucose / Sorbosone dehydrogenase MS14413_03450 PF03707 Bacterial signalling protein N terminal repeat MS14413_03450 PF00990 Diguanylate cyclase, GGDEF domain MS14413_03450 PF00563 EAL domain MS14413_03455 PF02378 Phosphotransferase system, EIIC MS14413_03455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MS14413_03456 PF00294 pfkB family carbohydrate kinase MS14413_03457 PF02896 PEP-utilising enzyme, TIM barrel domain MS14413_03457 PF00391 PEP-utilising enzyme, mobile domain MS14413_03457 PF05524 PEP-utilising enzyme, N-terminal MS14413_03457 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MS14413_03457 PF00381 PTS HPr component phosphorylation site MS14413_03462 PF05525 Branched-chain amino acid transport protein MS14413_03463 PF00557 Metallopeptidase family M24 MS14413_03464 PF03466 LysR substrate binding domain MS14413_03464 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03466 PF00462 Glutaredoxin MS14413_03467 PF00202 Aminotransferase class-III MS14413_03468 PF00478 IMP dehydrogenase / GMP reductase domain MS14413_03468 PF00571 CBS domain MS14413_03473 PF02881 SRP54-type protein, helical bundle domain MS14413_03473 PF00448 SRP54-type protein, GTPase domain MS14413_03475 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MS14413_03478 PF08173 Membrane bound YbgT-like protein MS14413_03479 PF02322 Cytochrome bd terminal oxidase subunit II MS14413_03480 PF01654 Cytochrome bd terminal oxidase subunit I MS14413_03484 PF07290 Protein of unknown function (DUF1449) MS14413_03486 PF00294 pfkB family carbohydrate kinase MS14413_03487 PF00593 TonB dependent receptor MS14413_03487 PF07715 TonB-dependent Receptor Plug Domain MS14413_03488 PF08367 Peptidase M16C associated MS14413_03488 PF05193 Peptidase M16 inactive domain MS14413_03488 PF00675 Insulinase (Peptidase family M16) MS14413_03489 PF02253 Phospholipase A1 MS14413_03490 PF02386 Cation transport protein MS14413_03491 PF02080 TrkA-C domain MS14413_03491 PF02254 TrkA-N domain MS14413_03492 PF00585 C-terminal regulatory domain of Threonine dehydratase MS14413_03492 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_03493 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MS14413_03496 PF01118 Semialdehyde dehydrogenase, NAD binding domain MS14413_03496 PF02774 Semialdehyde dehydrogenase, dimerisation domain MS14413_03498 PF02617 ATP-dependent Clp protease adaptor protein ClpS MS14413_03499 PF10431 C-terminal, D2-small domain, of ClpB protein MS14413_03499 PF02861 Clp amino terminal domain, pathogenicity island component MS14413_03499 PF17871 AAA lid domain MS14413_03499 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_03499 PF07724 AAA domain (Cdc48 subfamily) MS14413_03500 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MS14413_03501 PF00793 DAHP synthetase I family MS14413_03504 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MS14413_03504 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03510 PF00117 Glutamine amidotransferase class-I MS14413_03510 PF06418 CTP synthase N-terminus MS14413_03511 PF00793 DAHP synthetase I family MS14413_03512 PF03952 Enolase, N-terminal domain MS14413_03512 PF00113 Enolase, C-terminal TIM barrel domain MS14413_03513 PF04239 Protein of unknown function (DUF421) MS14413_03514 PF04977 Septum formation initiator MS14413_03515 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MS14413_03516 PF01144 Coenzyme A transferase MS14413_03517 PF01144 Coenzyme A transferase MS14413_03518 PF00108 Thiolase, N-terminal domain MS14413_03518 PF02803 Thiolase, C-terminal domain MS14413_03519 PF00206 Lyase MS14413_03519 PF10397 Adenylosuccinate lyase C-terminus MS14413_03520 PF00561 alpha/beta hydrolase fold MS14413_03521 PF07690 Major Facilitator Superfamily MS14413_03522 PF02627 Carboxymuconolactone decarboxylase family MS14413_03523 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal MS14413_03523 PF00775 Dioxygenase MS14413_03524 PF00775 Dioxygenase MS14413_03525 PF01487 Type I 3-dehydroquinase MS14413_03528 PF04966 Carbohydrate-selective porin, OprB family MS14413_03529 PF13360 PQQ-like domain MS14413_03529 PF01011 PQQ enzyme repeat MS14413_03531 PF04143 Sulphur transport MS14413_03533 PF00753 Metallo-beta-lactamase superfamily MS14413_03534 PF09339 IclR helix-turn-helix domain MS14413_03534 PF01614 Bacterial transcriptional regulator MS14413_03535 PF03466 LysR substrate binding domain MS14413_03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03536 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_03536 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_03536 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_03539 PF00106 short chain dehydrogenase MS14413_03541 PF07690 Major Facilitator Superfamily MS14413_03543 PF01425 Amidase MS14413_03544 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MS14413_03547 PF00355 Rieske [2Fe-2S] domain MS14413_03547 PF00848 Ring hydroxylating alpha subunit (catalytic domain) MS14413_03550 PF00175 Oxidoreductase NAD-binding domain MS14413_03550 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_03551 PF01613 Flavin reductase like domain MS14413_03552 PF02311 AraC-like ligand binding domain MS14413_03552 PF12833 Helix-turn-helix domain MS14413_03553 PF07833 Copper amine oxidase N-terminal domain MS14413_03553 PF02727 Copper amine oxidase, N2 domain MS14413_03553 PF02728 Copper amine oxidase, N3 domain MS14413_03553 PF01179 Copper amine oxidase, enzyme domain MS14413_03555 PF00171 Aldehyde dehydrogenase family MS14413_03556 PF01804 Penicillin amidase MS14413_03557 PF12146 Serine aminopeptidase, S33 MS14413_03558 PF00108 Thiolase, N-terminal domain MS14413_03558 PF02803 Thiolase, C-terminal domain MS14413_03559 PF01144 Coenzyme A transferase MS14413_03560 PF01144 Coenzyme A transferase MS14413_03561 PF00775 Dioxygenase MS14413_03561 PF04444 Catechol dioxygenase N terminus MS14413_03562 PF02426 Muconolactone delta-isomerase MS14413_03563 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MS14413_03563 PF13378 Enolase C-terminal domain-like MS14413_03564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03564 PF03466 LysR substrate binding domain MS14413_03566 PF07729 FCD domain MS14413_03566 PF00392 Bacterial regulatory proteins, gntR family MS14413_03567 PF00920 Dehydratase family MS14413_03568 PF07690 Major Facilitator Superfamily MS14413_03570 PF00171 Aldehyde dehydrogenase family MS14413_03574 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_03574 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_03574 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_03576 PF00158 Sigma-54 interaction domain MS14413_03576 PF06506 Propionate catabolism activator MS14413_03576 PF02954 Bacterial regulatory protein, Fis family MS14413_03577 PF00501 AMP-binding enzyme MS14413_03577 PF13193 AMP-binding enzyme C-terminal domain MS14413_03578 PF04341 Protein of unknown function, DUF485 MS14413_03579 PF00474 Sodium:solute symporter family MS14413_03580 PF00107 Zinc-binding dehydrogenase MS14413_03580 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_03581 PF00171 Aldehyde dehydrogenase family MS14413_03583 PF00561 alpha/beta hydrolase fold MS14413_03584 PF06628 Catalase-related immune-responsive MS14413_03584 PF00199 Catalase MS14413_03587 PF07859 alpha/beta hydrolase fold MS14413_03588 PF01047 MarR family MS14413_03589 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MS14413_03589 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03590 PF00106 short chain dehydrogenase MS14413_03591 PF01872 RibD C-terminal domain MS14413_03592 PF09278 MerR, DNA binding MS14413_03592 PF00376 MerR family regulatory protein MS14413_03594 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03596 PF12706 Beta-lactamase superfamily domain MS14413_03597 PF08359 YsiA-like protein, C-terminal region MS14413_03597 PF00440 Bacterial regulatory proteins, tetR family MS14413_03599 PF00857 Isochorismatase family MS14413_03600 PF03466 LysR substrate binding domain MS14413_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03601 PF07995 Glucose / Sorbosone dehydrogenase MS14413_03602 PF02254 TrkA-N domain MS14413_03602 PF00999 Sodium/hydrogen exchanger family MS14413_03603 PF00665 Integrase core domain MS14413_03603 PF13936 Helix-turn-helix domain MS14413_03605 PF01546 Peptidase family M20/M25/M40 MS14413_03605 PF07687 Peptidase dimerisation domain MS14413_03607 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB MS14413_03607 PF17287 POTRA domain MS14413_03607 PF08479 POTRA domain, ShlB-type MS14413_03608 PF05860 haemagglutination activity domain MS14413_03608 PF13332 Hemagglutinin repeat MS14413_03608 PF04829 Pre-toxin domain with VENN motif MS14413_03608 PF13018 Extended Signal Peptide of Type V secretion system MS14413_03609 PF13936 Helix-turn-helix domain MS14413_03609 PF00665 Integrase core domain MS14413_03613 PF07690 Major Facilitator Superfamily MS14413_03614 PF04909 Amidohydrolase MS14413_03616 PF00392 Bacterial regulatory proteins, gntR family MS14413_03616 PF07702 UTRA domain MS14413_03617 PF08450 SMP-30/Gluconolactonase/LRE-like region MS14413_03619 PF03466 LysR substrate binding domain MS14413_03619 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03623 PF07690 Major Facilitator Superfamily MS14413_03624 PF01842 ACT domain MS14413_03624 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MS14413_03624 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MS14413_03625 PF03737 Aldolase/RraA MS14413_03629 PF00529 HlyD membrane-fusion protein of T1SS MS14413_03629 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_03632 PF00171 Aldehyde dehydrogenase family MS14413_03633 PF00920 Dehydratase family MS14413_03635 PF03466 LysR substrate binding domain MS14413_03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03636 PF01370 NAD dependent epimerase/dehydratase family MS14413_03637 PF07690 Major Facilitator Superfamily MS14413_03638 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MS14413_03638 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MS14413_03639 PF12833 Helix-turn-helix domain MS14413_03639 PF06719 AraC-type transcriptional regulator N-terminus MS14413_03642 PF00107 Zinc-binding dehydrogenase MS14413_03642 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_03645 PF00005 ABC transporter MS14413_03649 PF14572 Phosphoribosyl synthetase-associated domain MS14413_03649 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MS14413_03650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MS14413_03665 PF00196 Bacterial regulatory proteins, luxR family MS14413_03666 PF01425 Amidase MS14413_03667 PF13533 Biotin-lipoyl like MS14413_03668 PF07690 Major Facilitator Superfamily MS14413_03673 PF01975 Survival protein SurE MS14413_03675 PF02824 TGS domain MS14413_03675 PF13291 ACT domain MS14413_03675 PF04607 Region found in RelA / SpoT proteins MS14413_03686 PF12146 Serine aminopeptidase, S33 MS14413_03687 PF02311 AraC-like ligand binding domain MS14413_03687 PF12833 Helix-turn-helix domain MS14413_03689 PF00512 His Kinase A (phospho-acceptor) domain MS14413_03689 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MS14413_03689 PF00672 HAMP domain MS14413_03689 PF16527 Two-component sensor protein CpxA, periplasmic domain MS14413_03690 PF00486 Transcriptional regulatory protein, C terminal MS14413_03690 PF00072 Response regulator receiver domain MS14413_03691 PF00529 HlyD membrane-fusion protein of T1SS MS14413_03691 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_03692 PF00873 AcrB/AcrD/AcrF family MS14413_03693 PF02321 Outer membrane efflux protein MS14413_03694 PF12146 Serine aminopeptidase, S33 MS14413_03695 PF00743 Flavin-binding monooxygenase-like MS14413_03696 PF01593 Flavin containing amine oxidoreductase MS14413_03699 PF01266 FAD dependent oxidoreductase MS14413_03703 PF16970 Type-1 fimbrial protein, A MS14413_03706 PF02753 Pili assembly chaperone PapD, C-terminal domain MS14413_03706 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MS14413_03707 PF13953 PapC C-terminal domain MS14413_03707 PF13954 PapC N-terminal domain MS14413_03707 PF00577 Outer membrane usher protein MS14413_03708 PF00419 Fimbrial protein MS14413_03710 PF00107 Zinc-binding dehydrogenase MS14413_03710 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_03712 PF00199 Catalase MS14413_03715 PF13091 PLD-like domain MS14413_03719 PF01244 Membrane dipeptidase (Peptidase family M19) MS14413_03720 PF13186 Iron-sulfur cluster-binding domain MS14413_03720 PF04055 Radical SAM superfamily MS14413_03721 PF05402 Coenzyme PQQ synthesis protein D (PqqD) MS14413_03722 PF03070 TENA/THI-4/PQQC family MS14413_03723 PF12706 Beta-lactamase superfamily domain MS14413_03724 PF13090 Polyphosphate kinase C-terminal domain 2 MS14413_03724 PF17941 Polyphosphate kinase C-terminal domain 1 MS14413_03724 PF02503 Polyphosphate kinase middle domain MS14413_03724 PF13089 Polyphosphate kinase N-terminal domain MS14413_03725 PF00149 Calcineurin-like phosphoesterase MS14413_03727 PF00550 Phosphopantetheine attachment site MS14413_03727 PF00857 Isochorismatase family MS14413_03728 PF00106 short chain dehydrogenase MS14413_03729 PF03459 TOBE domain MS14413_03729 PF00005 ABC transporter MS14413_03730 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03732 PF03459 TOBE domain MS14413_03732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03733 PF00848 Ring hydroxylating alpha subunit (catalytic domain) MS14413_03733 PF00355 Rieske [2Fe-2S] domain MS14413_03734 PF00866 Ring hydroxylating beta subunit MS14413_03735 PF00970 Oxidoreductase FAD-binding domain MS14413_03735 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_03735 PF00175 Oxidoreductase NAD-binding domain MS14413_03736 PF14525 AraC-binding-like domain MS14413_03736 PF12833 Helix-turn-helix domain MS14413_03738 PF01613 Flavin reductase like domain MS14413_03741 PF01738 Dienelactone hydrolase family MS14413_03742 PF07690 Major Facilitator Superfamily MS14413_03743 PF12833 Helix-turn-helix domain MS14413_03743 PF06719 AraC-type transcriptional regulator N-terminus MS14413_03749 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03749 PF03466 LysR substrate binding domain MS14413_03750 PF01144 Coenzyme A transferase MS14413_03751 PF01144 Coenzyme A transferase MS14413_03752 PF02667 Short chain fatty acid transporter MS14413_03753 PF00108 Thiolase, N-terminal domain MS14413_03753 PF02803 Thiolase, C-terminal domain MS14413_03754 PF03466 LysR substrate binding domain MS14413_03754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MS14413_03755 PF03466 LysR substrate binding domain MS14413_03758 PF00206 Lyase MS14413_03758 PF10415 Fumarase C C-terminus MS14413_03759 PF00593 TonB dependent receptor MS14413_03759 PF07715 TonB-dependent Receptor Plug Domain MS14413_03760 PF00083 Sugar (and other) transporter MS14413_03763 PF00005 ABC transporter MS14413_03764 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MS14413_03768 PF07702 UTRA domain MS14413_03768 PF00392 Bacterial regulatory proteins, gntR family MS14413_03770 PF02525 Flavodoxin-like fold MS14413_03771 PF01638 HxlR-like helix-turn-helix MS14413_03772 PF12833 Helix-turn-helix domain MS14413_03772 PF06445 GyrI-like small molecule binding domain MS14413_03775 PF01925 Sulfite exporter TauE/SafE MS14413_03776 PF00753 Metallo-beta-lactamase superfamily MS14413_03776 PF04273 Putative phosphatase (DUF442) MS14413_03777 PF04273 Putative phosphatase (DUF442) MS14413_03777 PF00753 Metallo-beta-lactamase superfamily MS14413_03778 PF00158 Sigma-54 interaction domain MS14413_03778 PF02954 Bacterial regulatory protein, Fis family MS14413_03778 PF00072 Response regulator receiver domain MS14413_03779 PF01062 Bestrophin, RFP-TM, chloride channel MS14413_03780 PF00107 Zinc-binding dehydrogenase MS14413_03780 PF08240 Alcohol dehydrogenase GroES-like domain MS14413_03781 PF00106 short chain dehydrogenase MS14413_03782 PF07992 Pyridine nucleotide-disulphide oxidoreductase MS14413_03782 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MS14413_03783 PF00364 Biotin-requiring enzyme MS14413_03783 PF02817 e3 binding domain MS14413_03783 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MS14413_03784 PF02779 Transketolase, pyrimidine binding domain MS14413_03784 PF02780 Transketolase, C-terminal domain MS14413_03785 PF00676 Dehydrogenase E1 component MS14413_03786 PF04055 Radical SAM superfamily MS14413_03789 PF08448 PAS fold MS14413_03789 PF00990 Diguanylate cyclase, GGDEF domain MS14413_03790 PF01264 Chorismate synthase MS14413_03791 PF05175 Methyltransferase small domain MS14413_03792 PF00291 Pyridoxal-phosphate dependent enzyme MS14413_03794 PF01434 Peptidase family M41 MS14413_03794 PF00004 ATPase family associated with various cellular activities (AAA) MS14413_03794 PF17862 AAA+ lid domain MS14413_03796 PF05166 YcgL domain MS14413_03800 PF00570 HRDC domain MS14413_03800 PF01612 3'-5' exonuclease MS14413_03801 PF02132 RecR protein MS14413_03801 PF13662 Toprim domain MS14413_03802 PF02575 YbaB/EbfC DNA-binding family MS14413_03804 PF01053 Cys/Met metabolism PLP-dependent enzyme MS14413_03805 PF00561 alpha/beta hydrolase fold MS14413_03806 PF08241 Methyltransferase domain MS14413_03812 PF01230 HIT domain MS14413_03819 PF00005 ABC transporter MS14413_03820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MS14413_03822 PF02684 Lipid-A-disaccharide synthetase MS14413_03823 PF07715 TonB-dependent Receptor Plug Domain MS14413_03823 PF00593 TonB dependent receptor MS14413_03827 PF01925 Sulfite exporter TauE/SafE MS14413_03828 PF00793 DAHP synthetase I family MS14413_03829 PF02654 Cobalamin-5-phosphate synthase MS14413_03832 PF02277 Phosphoribosyltransferase MS14413_03833 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase MS14413_03835 PF13419 Haloacid dehalogenase-like hydrolase MS14413_03840 PF07715 TonB-dependent Receptor Plug Domain MS14413_03840 PF00593 TonB dependent receptor MS14413_03843 PF04183 IucA / IucC family MS14413_03843 PF06276 Ferric iron reductase FhuF-like transporter MS14413_03844 PF06276 Ferric iron reductase FhuF-like transporter MS14413_03844 PF04183 IucA / IucC family MS14413_03845 PF07690 Major Facilitator Superfamily MS14413_03846 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) MS14413_03847 PF06276 Ferric iron reductase FhuF-like transporter MS14413_03847 PF04183 IucA / IucC family MS14413_03848 PF04073 Aminoacyl-tRNA editing domain MS14413_03850 PF03109 ABC1 family MS14413_03851 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_03851 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_03851 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_03852 PF02770 Acyl-CoA dehydrogenase, middle domain MS14413_03852 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MS14413_03852 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MS14413_03853 PF00487 Fatty acid desaturase MS14413_03854 PF12833 Helix-turn-helix domain MS14413_03854 PF12852 Cupin MS14413_03855 PF00639 PPIC-type PPIASE domain MS14413_03855 PF09312 SurA N-terminal domain MS14413_03856 PF00216 Bacterial DNA-binding protein MS14413_03859 PF02082 Transcriptional regulator MS14413_03860 PF00266 Aminotransferase class-V MS14413_03861 PF01592 NifU-like N terminal domain MS14413_03862 PF01521 Iron-sulphur cluster biosynthesis MS14413_03863 PF00226 DnaJ domain MS14413_03863 PF07743 HSCB C-terminal oligomerisation domain MS14413_03864 PF00012 Hsp70 protein MS14413_03865 PF00111 2Fe-2S iron-sulfur cluster binding domain MS14413_03866 PF00211 Adenylate and Guanylate cyclase catalytic domain MS14413_03868 PF17757 UvrB interaction domain MS14413_03868 PF02559 CarD-like/TRCF domain MS14413_03868 PF03461 TRCF domain MS14413_03868 PF00271 Helicase conserved C-terminal domain MS14413_03868 PF00270 DEAD/DEAH box helicase MS14413_03872 PF03737 Aldolase/RraA MS14413_03873 PF13460 NAD(P)H-binding MS14413_03874 PF01649 Ribosomal protein S20 MS14413_03876 PF00459 Inositol monophosphatase family MS14413_03879 PF00005 ABC transporter MS14413_03879 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MS14413_03880 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03881 PF00528 Binding-protein-dependent transport system inner membrane component MS14413_03882 PF01432 Peptidase family M3 MS14413_03886 PF00593 TonB dependent receptor MS14413_03886 PF07715 TonB-dependent Receptor Plug Domain MS14413_03888 PF01618 MotA/TolQ/ExbB proton channel family MS14413_03889 PF02472 Biopolymer transport protein ExbD/TolR MS14413_03890 PF02472 Biopolymer transport protein ExbD/TolR MS14413_03892 PF01274 Malate synthase MS14413_03893 PF03969 AFG1-like ATPase MS14413_03895 PF00743 Flavin-binding monooxygenase-like MS14413_03897 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MS14413_03899 PF00216 Bacterial DNA-binding protein MS14413_03900 PF00575 S1 RNA binding domain MS14413_03901 PF02224 Cytidylate kinase MS14413_03903 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MS14413_03905 PF03167 Uracil DNA glycosylase superfamily MS14413_03907 PF03934 Type II secretion system (T2SS), protein K MS14413_03908 PF07963 Prokaryotic N-terminal methylation motif MS14413_03908 PF11612 Type II secretion system (T2SS), protein J MS14413_03909 PF07963 Prokaryotic N-terminal methylation motif MS14413_03909 PF02501 Type II secretion system (T2SS), protein I MS14413_03912 PF01026 TatD related DNase MS14413_03914 PF09115 DNA polymerase III, delta subunit, C terminal MS14413_03915 PF02348 Cytidylyltransferase MS14413_03916 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MS14413_03917 PF00664 ABC transporter transmembrane region MS14413_03917 PF00005 ABC transporter MS14413_03919 PF01618 MotA/TolQ/ExbB proton channel family MS14413_03920 PF17762 HTH domain found in ParB protein MS14413_03920 PF02195 ParB-like nuclease domain MS14413_03921 PF13614 AAA domain MS14413_03922 PF02527 rRNA small subunit methyltransferase G MS14413_03923 PF00483 Nucleotidyl transferase MS14413_03924 PF01636 Phosphotransferase enzyme family MS14413_03925 PF04453 LPS transport system D MS14413_03925 PF03968 OstA-like protein MS14413_03926 PF00639 PPIC-type PPIASE domain MS14413_03926 PF09312 SurA N-terminal domain MS14413_03927 PF01116 Fructose-bisphosphate aldolase class-II MS14413_03929 PF00162 Phosphoglycerate kinase MS14413_03931 PF02545 Maf-like protein MS14413_03932 PF08007 Cupin superfamily protein MS14413_03935 PF00375 Sodium:dicarboxylate symporter family MS14413_03936 PF06912 Protein of unknown function (DUF1275) MS14413_03937 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) MS14413_03938 PF00664 ABC transporter transmembrane region MS14413_03938 PF00005 ABC transporter MS14413_03940 PF12833 Helix-turn-helix domain MS14413_03940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term MS14413_03941 PF01597 Glycine cleavage H-protein MS14413_03942 PF02146 Sir2 family MS14413_03943 PF00474 Sodium:solute symporter family MS14413_03944 PF01037 Lrp/AsnC ligand binding domain MS14413_03945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MS14413_03945 PF00171 Aldehyde dehydrogenase family MS14413_03945 PF01619 Proline dehydrogenase MS14413_03945 PF14850 DNA-binding domain of Proline dehydrogenase MS14413_03946 PF04229 GrpB protein MS14413_03947 PF05958 tRNA (Uracil-5-)-methyltransferase MS14413_03949 PF09992 Phosphodiester glycosidase MS14413_03951 PF04264 YceI-like domain MS14413_03953 PF02779 Transketolase, pyrimidine binding domain MS14413_03953 PF02780 Transketolase, C-terminal domain MS14413_03953 PF00456 Transketolase, thiamine diphosphate binding domain