locus-tag class description NHY62_00015 PF00012 Hsp70 protein NHY62_00045 PF07859 alpha/beta hydrolase fold NHY62_00050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY62_00090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY62_00095 PF01252 Signal peptidase (SPase) II NHY62_00105 PF06574 FAD synthetase NHY62_00105 PF01687 Riboflavin kinase NHY62_00120 PF08362 YcdC-like protein, C-terminal region NHY62_00120 PF00440 Bacterial regulatory proteins, tetR family NHY62_00125 PF00005 ABC transporter NHY62_00130 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_00135 PF00296 Luciferase-like monooxygenase NHY62_00140 PF09084 NMT1/THI5 like NHY62_00145 PF09084 NMT1/THI5 like NHY62_00165 PF00106 short chain dehydrogenase NHY62_00170 PF13419 Haloacid dehalogenase-like hydrolase NHY62_00180 PF01323 DSBA-like thioredoxin domain NHY62_00185 PF08360 QacR-like protein, C-terminal region NHY62_00185 PF00440 Bacterial regulatory proteins, tetR family NHY62_00190 PF00440 Bacterial regulatory proteins, tetR family NHY62_00195 PF00175 Oxidoreductase NAD-binding domain NHY62_00200 PF00487 Fatty acid desaturase NHY62_00205 PF03725 3' exoribonuclease family, domain 2 NHY62_00205 PF01138 3' exoribonuclease family, domain 1 NHY62_00220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NHY62_00220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NHY62_00225 PF01510 N-acetylmuramoyl-L-alanine amidase NHY62_00240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY62_00240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY62_00245 PF13614 AAA domain NHY62_00245 PF13807 G-rich domain on putative tyrosine kinase NHY62_00245 PF02706 Chain length determinant protein NHY62_00250 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY62_00255 PF10531 SLBB domain NHY62_00255 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NHY62_00255 PF02563 Polysaccharide biosynthesis/export protein NHY62_00265 PF02719 Polysaccharide biosynthesis protein NHY62_00270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NHY62_00275 PF02348 Cytidylyltransferase NHY62_00325 PF00535 Glycosyl transferase family 2 NHY62_00330 PF02397 Bacterial sugar transferase NHY62_00335 PF00483 Nucleotidyl transferase NHY62_00340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY62_00340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY62_00340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY62_00350 PF16363 GDP-mannose 4,6 dehydratase NHY62_00355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY62_00355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY62_00355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY62_00355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY62_00360 PF02652 L-lactate permease NHY62_00370 PF01070 FMN-dependent dehydrogenase NHY62_00375 PF01565 FAD binding domain NHY62_00375 PF09330 D-lactate dehydrogenase, membrane binding NHY62_00380 PF00155 Aminotransferase class I and II NHY62_00385 PF07729 FCD domain NHY62_00385 PF00392 Bacterial regulatory proteins, gntR family NHY62_00435 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY62_00435 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY62_00445 PF08361 MAATS-type transcriptional repressor, C-terminal region NHY62_00445 PF00440 Bacterial regulatory proteins, tetR family NHY62_00460 PF00849 RNA pseudouridylate synthase NHY62_00475 PF00593 TonB dependent receptor NHY62_00475 PF07715 TonB-dependent Receptor Plug Domain NHY62_00485 PF01037 Lrp/AsnC ligand binding domain NHY62_00490 PF01266 FAD dependent oxidoreductase NHY62_00500 PF01042 Endoribonuclease L-PSP NHY62_00505 PF00324 Amino acid permease NHY62_00515 PF03466 LysR substrate binding domain NHY62_00515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_00525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY62_00525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY62_00530 PF00501 AMP-binding enzyme NHY62_00530 PF13193 AMP-binding enzyme C-terminal domain NHY62_00535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_00535 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_00535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_00540 PF00378 Enoyl-CoA hydratase/isomerase NHY62_00545 PF00378 Enoyl-CoA hydratase/isomerase NHY62_00555 PF00765 Autoinducer synthase NHY62_00565 PF03472 Autoinducer binding domain NHY62_00565 PF00196 Bacterial regulatory proteins, luxR family NHY62_00570 PF00501 AMP-binding enzyme NHY62_00575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_00575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_00575 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_00580 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY62_00580 PF00975 Thioesterase domain NHY62_00580 PF16197 Ketoacyl-synthetase C-terminal extension NHY62_00580 PF14765 Polyketide synthase dehydratase NHY62_00580 PF00550 Phosphopantetheine attachment site NHY62_00580 PF08242 Methyltransferase domain NHY62_00580 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY62_00600 PF12697 Alpha/beta hydrolase family NHY62_00605 PF01648 4'-phosphopantetheinyl transferase superfamily NHY62_00620 PF01722 BolA-like protein NHY62_00630 PF13614 AAA domain NHY62_00645 PF09335 SNARE associated Golgi protein NHY62_00655 PF04286 Protein of unknown function (DUF445) NHY62_00660 PF00117 Glutamine amidotransferase class-I NHY62_00660 PF00958 GMP synthase C terminal domain NHY62_00660 PF02540 NAD synthase NHY62_00665 PF13427 Domain of unknown function (DUF4111) NHY62_00665 PF01909 Nucleotidyltransferase domain NHY62_00680 PF02678 Pirin NHY62_00680 PF05726 Pirin C-terminal cupin domain NHY62_00700 PF03485 Arginyl tRNA synthetase N terminal domain NHY62_00700 PF05746 DALR anticodon binding domain NHY62_00700 PF00750 tRNA synthetases class I (R) NHY62_00705 PF00390 Malic enzyme, N-terminal domain NHY62_00705 PF03949 Malic enzyme, NAD binding domain NHY62_00720 PF01810 LysE type translocator NHY62_00750 PF00119 ATP synthase A chain NHY62_00755 PF00137 ATP synthase subunit C NHY62_00760 PF00430 ATP synthase B/B' CF(0) NHY62_00765 PF00213 ATP synthase delta (OSCP) subunit NHY62_00770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY62_00770 PF00306 ATP synthase alpha/beta chain, C terminal domain NHY62_00770 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY62_00780 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY62_00780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY62_00785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NHY62_00795 PF00255 Glutathione peroxidase NHY62_00805 PF07690 Major Facilitator Superfamily NHY62_00810 PF00440 Bacterial regulatory proteins, tetR family NHY62_00815 PF00892 EamA-like transporter family NHY62_00820 PF01300 Telomere recombination NHY62_00825 PF17782 DprA winged helix domain NHY62_00825 PF02481 DNA recombination-mediator protein A NHY62_00895 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_00925 PF11842 Domain of unknown function (DUF3362) NHY62_00925 PF04055 Radical SAM superfamily NHY62_00925 PF08497 Radical SAM N-terminal NHY62_00945 PF00817 impB/mucB/samB family NHY62_00945 PF11799 impB/mucB/samB family C-terminal domain NHY62_00945 PF11798 IMS family HHH motif NHY62_00955 PF07690 Major Facilitator Superfamily NHY62_00960 PF03641 Possible lysine decarboxylase NHY62_00965 PF03471 Transporter associated domain NHY62_00965 PF03741 Integral membrane protein TerC family NHY62_00990 PF13193 AMP-binding enzyme C-terminal domain NHY62_00990 PF00501 AMP-binding enzyme NHY62_01005 PF00719 Inorganic pyrophosphatase NHY62_01010 PF03573 outer membrane porin, OprD family NHY62_01025 PF00701 Dihydrodipicolinate synthetase family NHY62_01035 PF00392 Bacterial regulatory proteins, gntR family NHY62_01035 PF00155 Aminotransferase class I and II NHY62_01050 PF00665 Integrase core domain NHY62_01100 PF00905 Penicillin binding protein transpeptidase domain NHY62_01135 PF02899 Phage integrase, N-terminal SAM-like domain NHY62_01135 PF00589 Phage integrase family NHY62_01175 PF00809 Pterin binding enzyme NHY62_01180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY62_01180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY62_01180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY62_01180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY62_01225 PF01740 STAS domain NHY62_01225 PF00916 Sulfate permease family NHY62_01235 PF07690 Major Facilitator Superfamily NHY62_01240 PF00440 Bacterial regulatory proteins, tetR family NHY62_01240 PF02909 Tetracyclin repressor-like, C-terminal domain NHY62_01260 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NHY62_01265 PF01636 Phosphotransferase enzyme family NHY62_01285 PF00543 Nitrogen regulatory protein P-II NHY62_01295 PF03477 ATP cone domain NHY62_01300 PF01872 RibD C-terminal domain NHY62_01300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY62_01310 PF00677 Lumazine binding domain NHY62_01330 PF02789 Cytosol aminopeptidase family, N-terminal domain NHY62_01330 PF00883 Cytosol aminopeptidase family, catalytic domain NHY62_01345 PF03739 Lipopolysaccharide export system permease LptF/LptG NHY62_01360 PF02954 Bacterial regulatory protein, Fis family NHY62_01360 PF00072 Response regulator receiver domain NHY62_01360 PF00158 Sigma-54 interaction domain NHY62_01370 PF00196 Bacterial regulatory proteins, luxR family NHY62_01370 PF00072 Response regulator receiver domain NHY62_01375 PF00768 D-alanyl-D-alanine carboxypeptidase NHY62_01385 PF03447 Homoserine dehydrogenase, NAD binding domain NHY62_01385 PF00742 Homoserine dehydrogenase NHY62_01385 PF01842 ACT domain NHY62_01390 PF13098 Thioredoxin-like domain NHY62_01390 PF10411 Disulfide bond isomerase protein N-terminus NHY62_01405 PF07664 Ferrous iron transport protein B C terminus NHY62_01405 PF07670 Nucleoside recognition NHY62_01405 PF02421 Ferrous iron transport protein B NHY62_01415 PF08245 Mur ligase middle domain NHY62_01415 PF02875 Mur ligase family, glutamate ligase domain NHY62_01425 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY62_01430 PF01258 Prokaryotic dksA/traR C4-type zinc finger NHY62_01435 PF00149 Calcineurin-like phosphoesterase NHY62_01440 PF00293 NUDIX domain NHY62_01445 PF01964 Radical SAM ThiC family NHY62_01445 PF13667 ThiC-associated domain NHY62_01460 PF00892 EamA-like transporter family NHY62_01465 PF02321 Outer membrane efflux protein NHY62_01470 PF01895 PhoU domain NHY62_01475 PF04362 Bacterial Fe(2+) trafficking NHY62_01480 PF00206 Lyase NHY62_01480 PF14698 Argininosuccinate lyase C-terminal NHY62_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_01485 PF07694 5TMR of 5TMR-LYT NHY62_01485 PF06580 Histidine kinase NHY62_01490 PF04397 LytTr DNA-binding domain NHY62_01490 PF00072 Response regulator receiver domain NHY62_01495 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NHY62_01495 PF03900 Porphobilinogen deaminase, C-terminal domain NHY62_01535 PF00263 Bacterial type II and III secretion system protein NHY62_01535 PF03958 Bacterial type II/III secretion system short domain NHY62_01540 PF12401 Protein of unknown function (DUF2662) NHY62_01540 PF00498 FHA domain NHY62_01545 PF13419 Haloacid dehalogenase-like hydrolase NHY62_01550 PF00425 chorismate binding enzyme NHY62_01550 PF04715 Anthranilate synthase component I, N terminal region NHY62_01585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NHY62_01590 PF02357 Transcription termination factor nusG NHY62_01590 PF00467 KOW motif NHY62_01595 PF03946 Ribosomal protein L11, N-terminal domain NHY62_01595 PF00298 Ribosomal protein L11, RNA binding domain NHY62_01605 PF00466 Ribosomal protein L10 NHY62_01610 PF16320 Ribosomal protein L7/L12 dimerisation domain NHY62_01610 PF00542 Ribosomal protein L7/L12 C-terminal domain NHY62_01685 PF09278 MerR, DNA binding NHY62_01685 PF00376 MerR family regulatory protein NHY62_01705 PF00108 Thiolase, N-terminal domain NHY62_01705 PF02803 Thiolase, C-terminal domain NHY62_01710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY62_01710 PF00378 Enoyl-CoA hydratase/isomerase NHY62_01710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY62_01740 PF01066 CDP-alcohol phosphatidyltransferase NHY62_01770 PF13533 Biotin-lipoyl like NHY62_01775 PF03652 Holliday junction resolvase NHY62_01780 PF02622 Uncharacterized ACR, COG1678 NHY62_01795 PF06865 Pyrimidine/purine nucleoside phosphorylase NHY62_01800 PF00588 SpoU rRNA Methylase family NHY62_01800 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY62_01810 PF01121 Dephospho-CoA kinase NHY62_01815 PF06750 Bacterial Peptidase A24 N-terminal domain NHY62_01815 PF01478 Type IV leader peptidase family NHY62_01825 PF00482 Type II secretion system (T2SS), protein F NHY62_01830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NHY62_01830 PF00437 Type II/IV secretion system protein NHY62_01835 PF00121 Triosephosphate isomerase NHY62_01860 PF17384 RimP C-terminal SH3 domain NHY62_01860 PF02576 RimP N-terminal domain NHY62_01875 PF02033 Ribosome-binding factor A NHY62_01880 PF03334 Na+/H+ antiporter subunit NHY62_01885 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NHY62_01890 PF01899 Na+/H+ ion antiporter subunit NHY62_01895 PF00361 Proton-conducting membrane transporter NHY62_01900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY62_01905 PF13244 Domain of unknown function (DUF4040) NHY62_01905 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NHY62_01905 PF00361 Proton-conducting membrane transporter NHY62_01905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NHY62_01920 PF01502 Phosphoribosyl-AMP cyclohydrolase NHY62_01925 PF01494 FAD binding domain NHY62_01930 PF03109 ABC1 family NHY62_01940 PF01209 ubiE/COQ5 methyltransferase family NHY62_01950 PF03976 Polyphosphate kinase 2 (PPK2) NHY62_01970 PF13538 UvrD-like helicase C-terminal domain NHY62_01975 PF00144 Beta-lactamase NHY62_01980 PF00312 Ribosomal protein S15 NHY62_01985 PF00013 KH domain NHY62_01985 PF01138 3' exoribonuclease family, domain 1 NHY62_01985 PF03725 3' exoribonuclease family, domain 2 NHY62_01985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NHY62_01985 PF00575 S1 RNA binding domain NHY62_01990 PF01544 CorA-like Mg2+ transporter protein NHY62_02000 PF01556 DnaJ C terminal domain NHY62_02000 PF00226 DnaJ domain NHY62_02010 PF01430 Hsp33 protein NHY62_02025 PF00482 Type II secretion system (T2SS), protein F NHY62_02030 PF07963 Prokaryotic N-terminal methylation motif NHY62_02030 PF08334 Type II secretion system (T2SS), protein G NHY62_02040 PF01588 Putative tRNA binding domain NHY62_02045 PF00795 Carbon-nitrogen hydrolase NHY62_02050 PF00571 CBS domain NHY62_02050 PF03471 Transporter associated domain NHY62_02055 PF01206 Sulfurtransferase TusA NHY62_02070 PF01177 Asp/Glu/Hydantoin racemase NHY62_02080 PF00762 Ferrochelatase NHY62_02085 PF00753 Metallo-beta-lactamase superfamily NHY62_02090 PF03884 DNA gyrase inhibitor YacG NHY62_02110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NHY62_02125 PF01197 Ribosomal protein L31 NHY62_02130 PF03109 ABC1 family NHY62_02135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_02135 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY62_02145 PF01554 MatE NHY62_02155 PF06969 HemN C-terminal domain NHY62_02155 PF04055 Radical SAM superfamily NHY62_02160 PF00106 short chain dehydrogenase NHY62_02165 PF03466 LysR substrate binding domain NHY62_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_02180 PF13193 AMP-binding enzyme C-terminal domain NHY62_02180 PF00501 AMP-binding enzyme NHY62_02185 PF10150 Ribonuclease E/G family NHY62_02185 PF00575 S1 RNA binding domain NHY62_02185 PF12111 Polyribonucleotide phosphorylase C terminal NHY62_02190 PF00849 RNA pseudouridylate synthase NHY62_02190 PF01479 S4 domain NHY62_02195 PF13419 Haloacid dehalogenase-like hydrolase NHY62_02205 PF02798 Glutathione S-transferase, N-terminal domain NHY62_02220 PF12706 Beta-lactamase superfamily domain NHY62_02225 PF00141 Peroxidase NHY62_02235 PF00293 NUDIX domain NHY62_02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_02255 PF03466 LysR substrate binding domain NHY62_02265 PF00330 Aconitase family (aconitate hydratase) NHY62_02270 PF00694 Aconitase C-terminal domain NHY62_02280 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY62_02295 PF01176 Translation initiation factor 1A / IF-1 NHY62_02305 PF01416 tRNA pseudouridine synthase NHY62_02335 PF00375 Sodium:dicarboxylate symporter family NHY62_02345 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY62_02350 PF01810 LysE type translocator NHY62_02355 PF12848 ABC transporter NHY62_02355 PF16326 ABC transporter C-terminal domain NHY62_02355 PF00005 ABC transporter NHY62_02360 PF04102 SlyX NHY62_02370 PF01638 HxlR-like helix-turn-helix NHY62_02395 PF13361 UvrD-like helicase C-terminal domain NHY62_02395 PF00580 UvrD/REP helicase N-terminal domain NHY62_02400 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NHY62_02420 PF00999 Sodium/hydrogen exchanger family NHY62_02420 PF02254 TrkA-N domain NHY62_02425 PF00471 Ribosomal protein L33 NHY62_02430 PF00830 Ribosomal L28 family NHY62_02445 PF01842 ACT domain NHY62_02445 PF00551 Formyl transferase NHY62_02455 PF01618 MotA/TolQ/ExbB proton channel family NHY62_02475 PF00186 Dihydrofolate reductase NHY62_02495 PF01790 Prolipoprotein diacylglyceryl transferase NHY62_02515 PF00902 Sec-independent protein translocase protein (TatC) NHY62_02525 PF02416 mttA/Hcf106 family NHY62_02535 PF01725 Ham1 family NHY62_02550 PF00561 alpha/beta hydrolase fold NHY62_02555 PF00682 HMGL-like NHY62_02555 PF08502 LeuA allosteric (dimerisation) domain NHY62_02560 PF13640 2OG-Fe(II) oxygenase superfamily NHY62_02560 PF18331 PKHD-type hydroxylase C-terminal domain NHY62_02575 PF00574 Clp protease NHY62_02580 PF07724 AAA domain (Cdc48 subfamily) NHY62_02580 PF10431 C-terminal, D2-small domain, of ClpB protein NHY62_02580 PF06689 ClpX C4-type zinc finger NHY62_02595 PF05681 Fumarate hydratase (Fumerase) NHY62_02595 PF05683 Fumarase C-terminus NHY62_02600 PF07085 DRTGG domain NHY62_02600 PF01515 Phosphate acetyl/butaryl transferase NHY62_02610 PF00920 Dehydratase family NHY62_02615 PF01081 KDPG and KHG aldolase NHY62_02620 PF02447 GntP family permease NHY62_02625 PF01202 Shikimate kinase NHY62_02630 PF00171 Aldehyde dehydrogenase family NHY62_02635 PF00171 Aldehyde dehydrogenase family NHY62_02640 PF00561 alpha/beta hydrolase fold NHY62_02650 PF00933 Glycosyl hydrolase family 3 N terminal domain NHY62_02660 PF00534 Glycosyl transferases group 1 NHY62_02660 PF13439 Glycosyltransferase Family 4 NHY62_02665 PF01569 PAP2 superfamily NHY62_02670 PF04384 Iron-sulphur cluster assembly NHY62_02675 PF00334 Nucleoside diphosphate kinase NHY62_02690 PF13464 Domain of unknown function (DUF4115) NHY62_02695 PF04551 GcpE protein NHY62_02710 PF13360 PQQ-like domain NHY62_02715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NHY62_02715 PF01926 50S ribosome-binding GTPase NHY62_02730 PF00550 Phosphopantetheine attachment site NHY62_02735 PF00550 Phosphopantetheine attachment site NHY62_02745 PF00501 AMP-binding enzyme NHY62_02745 PF13193 AMP-binding enzyme C-terminal domain NHY62_02760 PF00221 Aromatic amino acid lyase NHY62_02790 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY62_02790 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY62_02805 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY62_02805 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY62_02820 PF02556 Preprotein translocase subunit SecB NHY62_02825 PF00462 Glutaredoxin NHY62_02835 PF03193 RsgA GTPase NHY62_02840 PF00929 Exonuclease NHY62_02855 PF02321 Outer membrane efflux protein NHY62_02860 PF02687 FtsX-like permease family NHY62_02860 PF00005 ABC transporter NHY62_02860 PF12704 MacB-like periplasmic core domain NHY62_02865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY62_02890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY62_02890 PF00205 Thiamine pyrophosphate enzyme, central domain NHY62_02890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY62_02895 PF10369 Small subunit of acetolactate synthase NHY62_02900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NHY62_02900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NHY62_02935 PF00009 Elongation factor Tu GTP binding domain NHY62_02935 PF03144 Elongation factor Tu domain 2 NHY62_02935 PF16658 Class II release factor RF3, C-terminal domain NHY62_02950 PF01026 TatD related DNase NHY62_02955 PF00330 Aconitase family (aconitate hydratase) NHY62_02955 PF00694 Aconitase C-terminal domain NHY62_02965 PF00899 ThiF family NHY62_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_02975 PF03466 LysR substrate binding domain NHY62_02985 PF01207 Dihydrouridine synthase (Dus) NHY62_02990 PF07690 Major Facilitator Superfamily NHY62_03000 PF00892 EamA-like transporter family NHY62_03005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NHY62_03005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NHY62_03010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NHY62_03015 PF02233 NAD(P) transhydrogenase beta subunit NHY62_03020 PF00106 short chain dehydrogenase NHY62_03030 PF01261 Xylose isomerase-like TIM barrel NHY62_03035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY62_03035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY62_03040 PF00378 Enoyl-CoA hydratase/isomerase NHY62_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_03045 PF00512 His Kinase A (phospho-acceptor) domain NHY62_03045 PF00072 Response regulator receiver domain NHY62_03045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NHY62_03045 PF00672 HAMP domain NHY62_03045 PF01627 Hpt domain NHY62_03050 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_03065 PF02824 TGS domain NHY62_03065 PF13291 ACT domain NHY62_03065 PF04607 Region found in RelA / SpoT proteins NHY62_03075 PF03819 MazG nucleotide pyrophosphohydrolase domain NHY62_03085 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY62_03085 PF12626 Polymerase A arginine-rich C-terminus NHY62_03085 PF01743 Poly A polymerase head domain NHY62_03090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NHY62_03100 PF02569 Pantoate-beta-alanine ligase NHY62_03105 PF03668 P-loop ATPase protein family NHY62_03110 PF00381 PTS HPr component phosphorylation site NHY62_03125 PF02824 TGS domain NHY62_03125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY62_03125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY62_03125 PF03129 Anticodon binding domain NHY62_03130 PF05198 Translation initiation factor IF-3, N-terminal domain NHY62_03130 PF00707 Translation initiation factor IF-3, C-terminal domain NHY62_03135 PF02798 Glutathione S-transferase, N-terminal domain NHY62_03135 PF00043 Glutathione S-transferase, C-terminal domain NHY62_03140 PF09335 SNARE associated Golgi protein NHY62_03145 PF07690 Major Facilitator Superfamily NHY62_03155 PF01632 Ribosomal protein L35 NHY62_03160 PF00453 Ribosomal protein L20 NHY62_03210 PF00085 Thioredoxin NHY62_03215 PF02541 Ppx/GppA phosphatase family NHY62_03230 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY62_03230 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY62_03235 PF02325 YGGT family NHY62_03260 PF00437 Type II/IV secretion system protein NHY62_03265 PF02566 OsmC-like protein NHY62_03270 PF01047 MarR family NHY62_03280 PF00795 Carbon-nitrogen hydrolase NHY62_03325 PF04552 Sigma-54, DNA binding domain NHY62_03325 PF00309 Sigma-54 factor, Activator interacting domain (AID) NHY62_03325 PF04963 Sigma-54 factor, core binding domain NHY62_03330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NHY62_03335 PF01722 BolA-like protein NHY62_03340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY62_03345 PF01634 ATP phosphoribosyltransferase NHY62_03355 PF00155 Aminotransferase class I and II NHY62_03360 PF04715 Anthranilate synthase component I, N terminal region NHY62_03360 PF00425 chorismate binding enzyme NHY62_03400 PF00293 NUDIX domain NHY62_03405 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_03410 PF00814 Glycoprotease family NHY62_03415 PF04445 Putative SAM-dependent methyltransferase NHY62_03425 PF00756 Putative esterase NHY62_03435 PF00834 Ribulose-phosphate 3 epimerase family NHY62_03465 PF00893 Small Multidrug Resistance protein NHY62_03470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY62_03470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY62_03475 PF01960 ArgJ family NHY62_03505 PF00962 Adenosine/AMP deaminase NHY62_03510 PF00107 Zinc-binding dehydrogenase NHY62_03510 PF08240 Alcohol dehydrogenase GroES-like domain NHY62_03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_03515 PF03466 LysR substrate binding domain NHY62_03525 PF07690 Major Facilitator Superfamily NHY62_03530 PF02515 CoA-transferase family III NHY62_03540 PF14537 Cytochrome c3 NHY62_03540 PF00890 FAD binding domain NHY62_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_03545 PF03466 LysR substrate binding domain NHY62_03555 PF07690 Major Facilitator Superfamily NHY62_03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_03560 PF03466 LysR substrate binding domain NHY62_03570 PF01546 Peptidase family M20/M25/M40 NHY62_03570 PF07687 Peptidase dimerisation domain NHY62_03600 PF01717 Cobalamin-independent synthase, Catalytic domain NHY62_03600 PF08267 Cobalamin-independent synthase, N-terminal domain NHY62_03605 PF01613 Flavin reductase like domain NHY62_03620 PF13737 Transposase DDE domain NHY62_03635 PF02567 Phenazine biosynthesis-like protein NHY62_03660 PF13360 PQQ-like domain NHY62_03660 PF01011 PQQ enzyme repeat NHY62_03725 PF13755 Sensor N-terminal transmembrane domain NHY62_03725 PF13756 Stimulus-sensing domain NHY62_03725 PF00512 His Kinase A (phospho-acceptor) domain NHY62_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_03725 PF00672 HAMP domain NHY62_03740 PF00268 Ribonucleotide reductase, small chain NHY62_03750 PF03477 ATP cone domain NHY62_03750 PF00317 Ribonucleotide reductase, all-alpha domain NHY62_03750 PF02867 Ribonucleotide reductase, barrel domain NHY62_03760 PF00486 Transcriptional regulatory protein, C terminal NHY62_03760 PF00072 Response regulator receiver domain NHY62_03765 PF00512 His Kinase A (phospho-acceptor) domain NHY62_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_03765 PF00672 HAMP domain NHY62_03775 PF00990 Diguanylate cyclase, GGDEF domain NHY62_03775 PF17151 Periplasmic sensor domain NHY62_03780 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NHY62_03785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NHY62_03790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NHY62_03790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NHY62_03800 PF10531 SLBB domain NHY62_03800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NHY62_03800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NHY62_03805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY62_03805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NHY62_03805 PF00384 Molybdopterin oxidoreductase NHY62_03810 PF00146 NADH dehydrogenase NHY62_03815 PF12838 4Fe-4S dicluster domain NHY62_03820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NHY62_03825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY62_03835 PF00361 Proton-conducting membrane transporter NHY62_03840 PF00361 Proton-conducting membrane transporter NHY62_03850 PF00313 'Cold-shock' DNA-binding domain NHY62_03855 PF03466 LysR substrate binding domain NHY62_03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_03860 PF00970 Oxidoreductase FAD-binding domain NHY62_03860 PF00175 Oxidoreductase NAD-binding domain NHY62_03875 PF05552 Conserved TM helix NHY62_03890 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_03935 PF01048 Phosphorylase superfamily NHY62_03950 PF00692 dUTPase NHY62_03980 PF01207 Dihydrouridine synthase (Dus) NHY62_03995 PF03309 Type III pantothenate kinase NHY62_04005 PF01925 Sulfite exporter TauE/SafE NHY62_04015 PF06470 SMC proteins Flexible Hinge Domain NHY62_04015 PF02463 RecF/RecN/SMC N terminal domain NHY62_04025 PF00533 BRCA1 C Terminus (BRCT) domain NHY62_04025 PF01653 NAD-dependent DNA ligase adenylation domain NHY62_04025 PF03120 NAD-dependent DNA ligase OB-fold domain NHY62_04025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NHY62_04025 PF12826 Helix-hairpin-helix motif NHY62_04030 PF00210 Ferritin-like domain NHY62_04035 PF07690 Major Facilitator Superfamily NHY62_04040 PF00982 Glycosyltransferase family 20 NHY62_04045 PF02358 Trehalose-phosphatase NHY62_04050 PF08241 Methyltransferase domain NHY62_04050 PF12697 Alpha/beta hydrolase family NHY62_04060 PF00155 Aminotransferase class I and II NHY62_04080 PF04079 Segregation and condensation complex subunit ScpB NHY62_04085 PF02616 Segregation and condensation protein ScpA NHY62_04090 PF01300 Telomere recombination NHY62_04095 PF04315 Elongation factor P hydroxylase NHY62_04100 PF02620 Large ribosomal RNA subunit accumulation protein YceD NHY62_04105 PF01783 Ribosomal L32p protein family NHY62_04110 PF00698 Acyl transferase domain NHY62_04120 PF00550 Phosphopantetheine attachment site NHY62_04125 PF04972 BON domain NHY62_04125 PF01476 LysM domain NHY62_04130 PF08543 Phosphomethylpyrimidine kinase NHY62_04130 PF03070 TENA/THI-4/PQQC family NHY62_04130 PF02581 Thiamine monophosphate synthase NHY62_04140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY62_04155 PF02261 Aspartate decarboxylase NHY62_04160 PF01195 Peptidyl-tRNA hydrolase NHY62_04165 PF01386 Ribosomal L25p family NHY62_04170 PF14572 Phosphoribosyl synthetase-associated domain NHY62_04170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY62_04195 PF08544 GHMP kinases C terminal NHY62_04195 PF00288 GHMP kinases N terminal domain NHY62_04200 PF03550 Outer membrane lipoprotein LolB NHY62_04210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NHY62_04210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NHY62_04210 PF01488 Shikimate / quinate 5-dehydrogenase NHY62_04220 PF13525 Outer membrane lipoprotein NHY62_04225 PF00849 RNA pseudouridylate synthase NHY62_04225 PF01479 S4 domain NHY62_04230 PF02578 Multi-copper polyphenol oxidoreductase laccase NHY62_04235 PF03358 NADPH-dependent FMN reductase NHY62_04240 PF01668 SmpB protein NHY62_04245 PF01467 Cytidylyltransferase-like NHY62_04250 PF00037 4Fe-4S binding domain NHY62_04270 PF03466 LysR substrate binding domain NHY62_04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_04275 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY62_04280 PF02028 BCCT, betaine/carnitine/choline family transporter NHY62_04285 PF07859 alpha/beta hydrolase fold NHY62_04300 PF00970 Oxidoreductase FAD-binding domain NHY62_04300 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_04300 PF00175 Oxidoreductase NAD-binding domain NHY62_04325 PF02678 Pirin NHY62_04325 PF05726 Pirin C-terminal cupin domain NHY62_04330 PF03653 Uncharacterised protein family (UPF0093) NHY62_04335 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY62_04335 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY62_04345 PF00164 Ribosomal protein S12/S23 NHY62_04350 PF00177 Ribosomal protein S7p/S5e NHY62_04375 PF00583 Acetyltransferase (GNAT) family NHY62_04380 PF04376 Arginine-tRNA-protein transferase, N terminus NHY62_04380 PF04377 Arginine-tRNA-protein transferase, C terminus NHY62_04385 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NHY62_04395 PF01580 FtsK/SpoIIIE family NHY62_04395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NHY62_04395 PF09397 Ftsk gamma domain NHY62_04395 PF17854 FtsK alpha domain NHY62_04415 PF03776 Septum formation topological specificity factor MinE NHY62_04420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NHY62_04425 PF03775 Septum formation inhibitor MinC, C-terminal domain NHY62_04435 PF01553 Acyltransferase NHY62_04440 PF13488 Glycine zipper NHY62_04440 PF00691 OmpA family NHY62_04445 PF00580 UvrD/REP helicase N-terminal domain NHY62_04445 PF13361 UvrD-like helicase C-terminal domain NHY62_04450 PF00692 dUTPase NHY62_04455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY62_04455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY62_04455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY62_04455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY62_04470 PF13230 Glutamine amidotransferases class-II NHY62_04475 PF01814 Hemerythrin HHE cation binding domain NHY62_04485 PF03658 RnfH family Ubiquitin NHY62_04490 PF04355 SmpA / OmlA family NHY62_04495 PF01475 Ferric uptake regulator family NHY62_04500 PF00437 Type II/IV secretion system protein NHY62_04505 PF00437 Type II/IV secretion system protein NHY62_04520 PF00149 Calcineurin-like phosphoesterase NHY62_04520 PF12320 Type 5 capsule protein repressor C-terminal domain NHY62_04540 PF08338 Domain of unknown function (DUF1731) NHY62_04540 PF01370 NAD dependent epimerase/dehydratase family NHY62_04545 PF01266 FAD dependent oxidoreductase NHY62_04550 PF00490 Delta-aminolevulinic acid dehydratase NHY62_04555 PF03061 Thioesterase superfamily NHY62_04560 PF13533 Biotin-lipoyl like NHY62_04640 PF00929 Exonuclease NHY62_04720 PF00145 C-5 cytosine-specific DNA methylase NHY62_04730 PF01695 IstB-like ATP binding protein NHY62_04780 PF07007 Lysozyme inhibitor LprI NHY62_04940 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NHY62_04985 PF00712 DNA polymerase III beta subunit, N-terminal domain NHY62_04985 PF02767 DNA polymerase III beta subunit, central domain NHY62_04985 PF02768 DNA polymerase III beta subunit, C-terminal domain NHY62_05145 PF02574 Homocysteine S-methyltransferase NHY62_05155 PF06039 Malate:quinone oxidoreductase (Mqo) NHY62_05160 PF05199 GMC oxidoreductase NHY62_05160 PF00732 GMC oxidoreductase NHY62_05165 PF00171 Aldehyde dehydrogenase family NHY62_05170 PF00440 Bacterial regulatory proteins, tetR family NHY62_05170 PF13977 BetI-type transcriptional repressor, C-terminal NHY62_05200 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY62_05200 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY62_05205 PF00375 Sodium:dicarboxylate symporter family NHY62_05210 PF07152 YaeQ protein NHY62_05215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY62_05220 PF14883 Hypothetical glycosyl hydrolase family 13 NHY62_05220 PF01522 Polysaccharide deacetylase NHY62_05225 PF00535 Glycosyl transferase family 2 NHY62_05235 PF00378 Enoyl-CoA hydratase/isomerase NHY62_05250 PF09339 IclR helix-turn-helix domain NHY62_05250 PF01614 Bacterial transcriptional regulator NHY62_05255 PF00355 Rieske [2Fe-2S] domain NHY62_05265 PF00355 Rieske [2Fe-2S] domain NHY62_05275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY62_05280 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_05280 PF14759 Reductase C-terminal NHY62_05285 PF07690 Major Facilitator Superfamily NHY62_05295 PF12697 Alpha/beta hydrolase family NHY62_05310 PF00171 Aldehyde dehydrogenase family NHY62_05315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY62_05315 PF00205 Thiamine pyrophosphate enzyme, central domain NHY62_05315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY62_05325 PF07690 Major Facilitator Superfamily NHY62_05330 PF01327 Polypeptide deformylase NHY62_05335 PF04960 Glutaminase NHY62_05340 PF02311 AraC-like ligand binding domain NHY62_05340 PF12833 Helix-turn-helix domain NHY62_05345 PF07690 Major Facilitator Superfamily NHY62_05350 PF01263 Aldose 1-epimerase NHY62_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_05360 PF03466 LysR substrate binding domain NHY62_05370 PF07690 Major Facilitator Superfamily NHY62_05375 PF00456 Transketolase, thiamine diphosphate binding domain NHY62_05380 PF02780 Transketolase, C-terminal domain NHY62_05380 PF02779 Transketolase, pyrimidine binding domain NHY62_05390 PF01384 Phosphate transporter family NHY62_05395 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_05410 PF03781 Sulfatase-modifying factor enzyme 1 NHY62_05415 PF00884 Sulfatase NHY62_05425 PF01106 NifU-like domain NHY62_05425 PF01521 Iron-sulphur cluster biosynthesis NHY62_05440 PF00561 alpha/beta hydrolase fold NHY62_05450 PF13472 GDSL-like Lipase/Acylhydrolase family NHY62_05455 PF00005 ABC transporter NHY62_05465 PF01694 Rhomboid family NHY62_05470 PF00912 Transglycosylase NHY62_05475 PF17941 Polyphosphate kinase C-terminal domain 1 NHY62_05475 PF13089 Polyphosphate kinase N-terminal domain NHY62_05475 PF02503 Polyphosphate kinase middle domain NHY62_05475 PF13090 Polyphosphate kinase C-terminal domain 2 NHY62_05490 PF00561 alpha/beta hydrolase fold NHY62_05495 PF18113 Rubredoxin binding C-terminal domain NHY62_05495 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_05500 PF00301 Rubredoxin NHY62_05520 PF14052 Capsule assembly protein Wzi NHY62_05530 PF01507 Phosphoadenosine phosphosulfate reductase family NHY62_05535 PF00009 Elongation factor Tu GTP binding domain NHY62_05550 PF03600 Citrate transporter NHY62_05560 PF03466 LysR substrate binding domain NHY62_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_05580 PF01774 UreD urease accessory protein NHY62_05585 PF00547 Urease, gamma subunit NHY62_05590 PF00699 Urease beta subunit NHY62_05595 PF00449 Urease alpha-subunit, N-terminal domain NHY62_05595 PF01979 Amidohydrolase family NHY62_05605 PF05194 UreE urease accessory protein, C-terminal domain NHY62_05605 PF02814 UreE urease accessory protein, N-terminal domain NHY62_05610 PF01730 UreF NHY62_05615 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY62_05645 PF05191 Adenylate kinase, active site lid NHY62_05660 PF04060 Putative Fe-S cluster NHY62_05665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY62_05665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY62_05675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NHY62_05680 PF02590 Predicted SPOUT methyltransferase NHY62_05685 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_05685 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY62_05685 PF02190 ATP-dependent protease La (LON) substrate-binding domain NHY62_05695 PF00691 OmpA family NHY62_05695 PF04355 SmpA / OmlA family NHY62_05700 PF01812 5-formyltetrahydrofolate cyclo-ligase family NHY62_06070 PF00884 Sulfatase NHY62_06070 PF08019 Phosphoethanolamine transferase EptA/EptB NHY62_06110 PF05195 Aminopeptidase P, N-terminal domain NHY62_06110 PF00557 Metallopeptidase family M24 NHY62_06120 PF01494 FAD binding domain NHY62_06130 PF13411 MerR HTH family regulatory protein NHY62_06165 PF04972 BON domain NHY62_06175 PF09297 NADH pyrophosphatase zinc ribbon domain NHY62_06175 PF00293 NUDIX domain NHY62_06185 PF00929 Exonuclease NHY62_06205 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_06205 PF12911 N-terminal TM domain of oligopeptide transport permease C NHY62_06230 PF00929 Exonuclease NHY62_06235 PF01979 Amidohydrolase family NHY62_06240 PF01590 GAF domain NHY62_06240 PF00990 Diguanylate cyclase, GGDEF domain NHY62_06240 PF00360 Phytochrome region NHY62_06240 PF00563 EAL domain NHY62_06245 PF00764 Arginosuccinate synthase NHY62_06250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY62_06250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_06265 PF05987 Bacterial protein of unknown function (DUF898) NHY62_06345 PF00324 Amino acid permease NHY62_06355 PF07729 FCD domain NHY62_06355 PF00392 Bacterial regulatory proteins, gntR family NHY62_06365 PF00171 Aldehyde dehydrogenase family NHY62_06375 PF00202 Aminotransferase class-III NHY62_06380 PF04958 Arginine N-succinyltransferase beta subunit NHY62_06390 PF13610 DDE domain NHY62_06400 PF00106 short chain dehydrogenase NHY62_06410 PF17932 Tetracyclin repressor-like, C-terminal domain NHY62_06410 PF00440 Bacterial regulatory proteins, tetR family NHY62_06415 PF02678 Pirin NHY62_06415 PF17954 Quercetinase C-terminal cupin domain NHY62_06425 PF00106 short chain dehydrogenase NHY62_06430 PF00743 Flavin-binding monooxygenase-like NHY62_06440 PF00860 Permease family NHY62_06445 PF00962 Adenosine/AMP deaminase NHY62_06450 PF01292 Prokaryotic cytochrome b561 NHY62_06460 PF01351 Ribonuclease HII NHY62_06470 PF00696 Amino acid kinase family NHY62_06470 PF01842 ACT domain NHY62_06470 PF13840 ACT domain NHY62_06475 PF01411 tRNA synthetases class II (A) NHY62_06475 PF02272 DHHA1 domain NHY62_06475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY62_06480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY62_06480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY62_06485 PF13393 Histidyl-tRNA synthetase NHY62_06490 PF00709 Adenylosuccinate synthetase NHY62_06505 PF00248 Aldo/keto reductase family NHY62_06525 PF02566 OsmC-like protein NHY62_06545 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_06545 PF17871 AAA lid domain NHY62_06545 PF02861 Clp amino terminal domain, pathogenicity island component NHY62_06545 PF10431 C-terminal, D2-small domain, of ClpB protein NHY62_06545 PF07724 AAA domain (Cdc48 subfamily) NHY62_06570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NHY62_06570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NHY62_06575 PF01979 Amidohydrolase family NHY62_06590 PF00043 Glutathione S-transferase, C-terminal domain NHY62_06590 PF13417 Glutathione S-transferase, N-terminal domain NHY62_06605 PF00043 Glutathione S-transferase, C-terminal domain NHY62_06605 PF02798 Glutathione S-transferase, N-terminal domain NHY62_06615 PF13192 Thioredoxin domain NHY62_06615 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_06635 PF00578 AhpC/TSA family NHY62_06635 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY62_06655 PF07690 Major Facilitator Superfamily NHY62_06660 PF03594 Benzoate membrane transport protein NHY62_06665 PF00106 short chain dehydrogenase NHY62_06670 PF00175 Oxidoreductase NAD-binding domain NHY62_06670 PF00970 Oxidoreductase FAD-binding domain NHY62_06670 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_06675 PF00866 Ring hydroxylating beta subunit NHY62_06680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY62_06680 PF00355 Rieske [2Fe-2S] domain NHY62_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_06690 PF03466 LysR substrate binding domain NHY62_06705 PF00376 MerR family regulatory protein NHY62_06705 PF09278 MerR, DNA binding NHY62_06740 PF02601 Exonuclease VII, large subunit NHY62_06740 PF13742 OB-fold nucleic acid binding domain NHY62_06770 PF01810 LysE type translocator NHY62_06775 PF00313 'Cold-shock' DNA-binding domain NHY62_06810 PF07690 Major Facilitator Superfamily NHY62_06815 PF01638 HxlR-like helix-turn-helix NHY62_06840 PF09190 DALR domain NHY62_06840 PF01406 tRNA synthetases class I (C) catalytic domain NHY62_06860 PF03968 OstA-like protein NHY62_06865 PF00005 ABC transporter NHY62_06865 PF12399 Branched-chain amino acid ATP-binding cassette transporter NHY62_06875 PF00664 ABC transporter transmembrane region NHY62_06875 PF03412 Peptidase C39 family NHY62_06875 PF00005 ABC transporter NHY62_06885 PF01205 Uncharacterized protein family UPF0029 NHY62_06890 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_06900 PF01596 O-methyltransferase NHY62_06925 PF01037 Lrp/AsnC ligand binding domain NHY62_06930 PF00892 EamA-like transporter family NHY62_06935 PF03707 Bacterial signalling protein N terminal repeat NHY62_06935 PF00990 Diguanylate cyclase, GGDEF domain NHY62_06935 PF00563 EAL domain NHY62_06955 PF07690 Major Facilitator Superfamily NHY62_06995 PF13419 Haloacid dehalogenase-like hydrolase NHY62_07005 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY62_07005 PF04717 Type VI secretion system, phage-baseplate injector NHY62_07005 PF13296 Putative type VI secretion system Rhs element Vgr NHY62_07035 PF03746 LamB/YcsF family NHY62_07040 PF07286 Protein of unknown function (DUF1445) NHY62_07050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY62_07050 PF00364 Biotin-requiring enzyme NHY62_07050 PF00289 Biotin carboxylase, N-terminal domain NHY62_07050 PF02785 Biotin carboxylase C-terminal domain NHY62_07055 PF00654 Voltage gated chloride channel NHY62_07075 PF00440 Bacterial regulatory proteins, tetR family NHY62_07085 PF13823 Alcohol dehydrogenase GroES-associated NHY62_07085 PF08240 Alcohol dehydrogenase GroES-like domain NHY62_07085 PF00107 Zinc-binding dehydrogenase NHY62_07100 PF02785 Biotin carboxylase C-terminal domain NHY62_07100 PF00289 Biotin carboxylase, N-terminal domain NHY62_07100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY62_07105 PF02525 Flavodoxin-like fold NHY62_07125 PF08753 NikR C terminal nickel binding domain NHY62_07125 PF01402 Ribbon-helix-helix protein, copG family NHY62_07130 PF01425 Amidase NHY62_07135 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY62_07140 PF00005 ABC transporter NHY62_07180 PF05947 Type VI secretion system, TssF NHY62_07195 PF06761 Intracellular multiplication and human macrophage-killing NHY62_07195 PF06744 Type VI secretion protein IcmF C-terminal NHY62_07195 PF14331 ImcF-related N-terminal domain NHY62_07205 PF01389 OmpA-like transmembrane domain NHY62_07205 PF00691 OmpA family NHY62_07220 PF17871 AAA lid domain NHY62_07220 PF10431 C-terminal, D2-small domain, of ClpB protein NHY62_07220 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_07220 PF07724 AAA domain (Cdc48 subfamily) NHY62_07225 PF06812 ImpA, N-terminal, type VI secretion system NHY62_07230 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NHY62_07260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY62_07295 PF09278 MerR, DNA binding NHY62_07295 PF00376 MerR family regulatory protein NHY62_07305 PF00701 Dihydrodipicolinate synthetase family NHY62_07315 PF00392 Bacterial regulatory proteins, gntR family NHY62_07320 PF05544 Proline racemase NHY62_07345 PF00083 Sugar (and other) transporter NHY62_07350 PF00171 Aldehyde dehydrogenase family NHY62_07355 PF13520 Amino acid permease NHY62_07360 PF03313 Serine dehydratase alpha chain NHY62_07360 PF03315 Serine dehydratase beta chain NHY62_07365 PF00171 Aldehyde dehydrogenase family NHY62_07365 PF01575 MaoC like domain NHY62_07370 PF05138 Phenylacetic acid catabolic protein NHY62_07375 PF06243 Phenylacetic acid degradation B NHY62_07380 PF05138 Phenylacetic acid catabolic protein NHY62_07385 PF01883 Iron-sulfur cluster assembly protein NHY62_07390 PF00970 Oxidoreductase FAD-binding domain NHY62_07390 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_07390 PF00175 Oxidoreductase NAD-binding domain NHY62_07395 PF00378 Enoyl-CoA hydratase/isomerase NHY62_07410 PF02803 Thiolase, C-terminal domain NHY62_07410 PF00108 Thiolase, N-terminal domain NHY62_07415 PF00501 AMP-binding enzyme NHY62_07415 PF14535 AMP-binding enzyme C-terminal domain NHY62_07420 PF08223 PaaX-like protein C-terminal domain NHY62_07420 PF07848 PaaX-like protein NHY62_07425 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_07430 PF03061 Thioesterase superfamily NHY62_07465 PF00199 Catalase NHY62_07470 PF01292 Prokaryotic cytochrome b561 NHY62_07500 PF00296 Luciferase-like monooxygenase NHY62_07505 PF00171 Aldehyde dehydrogenase family NHY62_07515 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY62_07525 PF00171 Aldehyde dehydrogenase family NHY62_07535 PF03466 LysR substrate binding domain NHY62_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_07540 PF02525 Flavodoxin-like fold NHY62_07545 PF01614 Bacterial transcriptional regulator NHY62_07545 PF09339 IclR helix-turn-helix domain NHY62_07550 PF01494 FAD binding domain NHY62_07565 PF00005 ABC transporter NHY62_07565 PF08402 TOBE domain NHY62_07570 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_07575 PF01266 FAD dependent oxidoreductase NHY62_07580 PF00266 Aminotransferase class-V NHY62_07585 PF13419 Haloacid dehalogenase-like hydrolase NHY62_07590 PF07690 Major Facilitator Superfamily NHY62_07595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_07595 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_07595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_07600 PF02515 CoA-transferase family III NHY62_07605 PF09339 IclR helix-turn-helix domain NHY62_07610 PF00378 Enoyl-CoA hydratase/isomerase NHY62_07615 PF03060 Nitronate monooxygenase NHY62_07620 PF07690 Major Facilitator Superfamily NHY62_07625 PF09339 IclR helix-turn-helix domain NHY62_07635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY62_07635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY62_07635 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY62_07645 PF00378 Enoyl-CoA hydratase/isomerase NHY62_07650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_07650 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_07650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_07655 PF07690 Major Facilitator Superfamily NHY62_07660 PF01144 Coenzyme A transferase NHY62_07665 PF01144 Coenzyme A transferase NHY62_07675 PF07690 Major Facilitator Superfamily NHY62_07685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_07685 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY62_07685 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_07685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_07700 PF03466 LysR substrate binding domain NHY62_07705 PF00682 HMGL-like NHY62_07710 PF00364 Biotin-requiring enzyme NHY62_07710 PF18140 Propionyl-coenzyme A carboxylase BT domain NHY62_07710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY62_07710 PF02785 Biotin carboxylase C-terminal domain NHY62_07710 PF00289 Biotin carboxylase, N-terminal domain NHY62_07715 PF00378 Enoyl-CoA hydratase/isomerase NHY62_07720 PF01039 Carboxyl transferase domain NHY62_07730 PF00440 Bacterial regulatory proteins, tetR family NHY62_07790 PF02464 Competence-damaged protein NHY62_07790 PF00994 Probable molybdopterin binding domain NHY62_07790 PF18146 Damage-inducible protein CinA KH domain NHY62_07825 PF00717 Peptidase S24-like NHY62_07835 PF01037 Lrp/AsnC ligand binding domain NHY62_07835 PF13404 AsnC-type helix-turn-helix domain NHY62_07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_07845 PF00512 His Kinase A (phospho-acceptor) domain NHY62_07845 PF09308 LuxQ, periplasmic NHY62_07845 PF00072 Response regulator receiver domain NHY62_07850 PF00072 Response regulator receiver domain NHY62_07865 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_07870 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_07880 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY62_07885 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY62_07895 PF03466 LysR substrate binding domain NHY62_07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_07910 PF00266 Aminotransferase class-V NHY62_07920 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_07925 PF00581 Rhodanese-like domain NHY62_07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_07935 PF03466 LysR substrate binding domain NHY62_07940 PF02798 Glutathione S-transferase, N-terminal domain NHY62_07945 PF02798 Glutathione S-transferase, N-terminal domain NHY62_07945 PF14834 Glutathione S-transferase, C-terminal domain NHY62_07950 PF03466 LysR substrate binding domain NHY62_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_07955 PF03788 LrgA family NHY62_07960 PF04172 LrgB-like family NHY62_07965 PF00392 Bacterial regulatory proteins, gntR family NHY62_07965 PF00155 Aminotransferase class I and II NHY62_07980 PF07690 Major Facilitator Superfamily NHY62_07985 PF16957 Malonate decarboxylase, alpha subunit, transporter NHY62_07990 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NHY62_07995 PF06857 Malonate decarboxylase delta subunit (MdcD) NHY62_08000 PF01039 Carboxyl transferase domain NHY62_08010 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NHY62_08015 PF00698 Acyl transferase domain NHY62_08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_08030 PF03466 LysR substrate binding domain NHY62_08035 PF00155 Aminotransferase class I and II NHY62_08035 PF00392 Bacterial regulatory proteins, gntR family NHY62_08045 PF02322 Cytochrome bd terminal oxidase subunit II NHY62_08060 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY62_08060 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_08060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_08065 PF00296 Luciferase-like monooxygenase NHY62_08080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY62_08090 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_08095 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NHY62_08100 PF01177 Asp/Glu/Hydantoin racemase NHY62_08115 PF03466 LysR substrate binding domain NHY62_08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_08125 PF13382 Adenine deaminase C-terminal domain NHY62_08125 PF01979 Amidohydrolase family NHY62_08135 PF03960 ArsC family NHY62_08140 PF01022 Bacterial regulatory protein, arsR family NHY62_08145 PF01758 Sodium Bile acid symporter family NHY62_08150 PF03466 LysR substrate binding domain NHY62_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_08165 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_08165 PF13192 Thioredoxin domain NHY62_08185 PF00588 SpoU rRNA Methylase family NHY62_08200 PF00375 Sodium:dicarboxylate symporter family NHY62_08205 PF00155 Aminotransferase class I and II NHY62_08210 PF01641 SelR domain NHY62_08215 PF00255 Glutathione peroxidase NHY62_08220 PF12852 Cupin NHY62_08220 PF12833 Helix-turn-helix domain NHY62_08230 PF00155 Aminotransferase class I and II NHY62_08240 PF02222 ATP-grasp domain NHY62_08280 PF01926 50S ribosome-binding GTPase NHY62_08280 PF06071 Protein of unknown function (DUF933) NHY62_08290 PF09383 NIL domain NHY62_08290 PF00005 ABC transporter NHY62_08295 PF03180 NLPA lipoprotein NHY62_08300 PF03180 NLPA lipoprotein NHY62_08305 PF00296 Luciferase-like monooxygenase NHY62_08315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_08315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY62_08330 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_08340 PF00005 ABC transporter NHY62_08350 PF01037 Lrp/AsnC ligand binding domain NHY62_08355 PF01709 Transcriptional regulator NHY62_08365 PF00440 Bacterial regulatory proteins, tetR family NHY62_08405 PF00892 EamA-like transporter family NHY62_08425 PF00577 Outer membrane usher protein NHY62_08425 PF13954 PapC N-terminal domain NHY62_08425 PF13953 PapC C-terminal domain NHY62_08430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY62_08430 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY62_08435 PF16970 Type-1 fimbrial protein, A NHY62_08450 PF04055 Radical SAM superfamily NHY62_08450 PF06968 Biotin and Thiamin Synthesis associated domain NHY62_08455 PF08331 Domain of unknown function (DUF1730) NHY62_08460 PF03853 YjeF-related protein N-terminus NHY62_08460 PF01256 Carbohydrate kinase NHY62_08465 PF02075 Crossover junction endodeoxyribonuclease RuvC NHY62_08480 PF00905 Penicillin binding protein transpeptidase domain NHY62_08515 PF04264 YceI-like domain NHY62_08525 PF09992 Phosphodiester glycosidase NHY62_08535 PF05958 tRNA (Uracil-5-)-methyltransferase NHY62_08540 PF04229 GrpB protein NHY62_08550 PF01037 Lrp/AsnC ligand binding domain NHY62_08555 PF00474 Sodium:solute symporter family NHY62_08560 PF02146 Sir2 family NHY62_08565 PF01597 Glycine cleavage H-protein NHY62_08570 PF12833 Helix-turn-helix domain NHY62_08570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NHY62_08580 PF00005 ABC transporter NHY62_08580 PF00664 ABC transporter transmembrane region NHY62_08585 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NHY62_08590 PF06912 Protein of unknown function (DUF1275) NHY62_08595 PF00375 Sodium:dicarboxylate symporter family NHY62_08610 PF08007 Cupin superfamily protein NHY62_08615 PF02545 Maf-like protein NHY62_08625 PF00162 Phosphoglycerate kinase NHY62_08635 PF01116 Fructose-bisphosphate aldolase class-II NHY62_08640 PF00639 PPIC-type PPIASE domain NHY62_08640 PF09312 SurA N-terminal domain NHY62_08645 PF04453 LPS transport system D NHY62_08645 PF03968 OstA-like protein NHY62_08655 PF00483 Nucleotidyl transferase NHY62_08660 PF02527 rRNA small subunit methyltransferase G NHY62_08665 PF13614 AAA domain NHY62_08670 PF17762 HTH domain found in ParB protein NHY62_08670 PF02195 ParB-like nuclease domain NHY62_08675 PF01618 MotA/TolQ/ExbB proton channel family NHY62_08695 PF02348 Cytidylyltransferase NHY62_08700 PF09115 DNA polymerase III, delta subunit, C terminal NHY62_08710 PF01026 TatD related DNase NHY62_08725 PF02501 Type II secretion system (T2SS), protein I NHY62_08725 PF07963 Prokaryotic N-terminal methylation motif NHY62_08730 PF07963 Prokaryotic N-terminal methylation motif NHY62_08730 PF11612 Type II secretion system (T2SS), protein J NHY62_08735 PF03934 Type II secretion system (T2SS), protein K NHY62_08745 PF03167 Uracil DNA glycosylase superfamily NHY62_08755 PF14437 MafB19-like deaminase NHY62_08765 PF02224 Cytidylate kinase NHY62_08775 PF00216 Bacterial DNA-binding protein NHY62_08785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NHY62_08795 PF00743 Flavin-binding monooxygenase-like NHY62_08805 PF03969 AFG1-like ATPase NHY62_08810 PF01274 Malate synthase NHY62_08820 PF02472 Biopolymer transport protein ExbD/TolR NHY62_08825 PF02472 Biopolymer transport protein ExbD/TolR NHY62_08860 PF01432 Peptidase family M3 NHY62_08865 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_08870 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_08875 PF00005 ABC transporter NHY62_08875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY62_08890 PF00459 Inositol monophosphatase family NHY62_08900 PF01649 Ribosomal protein S20 NHY62_08905 PF13460 NAD(P)H-binding NHY62_08910 PF03737 Aldolase/RraA NHY62_08940 PF00211 Adenylate and Guanylate cyclase catalytic domain NHY62_08945 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_08950 PF00012 Hsp70 protein NHY62_08955 PF07743 HSCB C-terminal oligomerisation domain NHY62_08955 PF00226 DnaJ domain NHY62_08960 PF01521 Iron-sulphur cluster biosynthesis NHY62_08965 PF01592 NifU-like N terminal domain NHY62_08970 PF00266 Aminotransferase class-V NHY62_08975 PF02082 Transcriptional regulator NHY62_08990 PF00216 Bacterial DNA-binding protein NHY62_08995 PF09312 SurA N-terminal domain NHY62_08995 PF00639 PPIC-type PPIASE domain NHY62_09005 PF00487 Fatty acid desaturase NHY62_09010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_09010 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_09010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_09020 PF03109 ABC1 family NHY62_09035 PF06276 Ferric iron reductase FhuF-like transporter NHY62_09035 PF04183 IucA / IucC family NHY62_09045 PF07690 Major Facilitator Superfamily NHY62_09050 PF06276 Ferric iron reductase FhuF-like transporter NHY62_09050 PF04183 IucA / IucC family NHY62_09055 PF06276 Ferric iron reductase FhuF-like transporter NHY62_09055 PF04183 IucA / IucC family NHY62_09095 PF13419 Haloacid dehalogenase-like hydrolase NHY62_09105 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NHY62_09110 PF02277 Phosphoribosyltransferase NHY62_09160 PF02684 Lipid-A-disaccharide synthetase NHY62_09170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY62_09175 PF00005 ABC transporter NHY62_09210 PF01230 HIT domain NHY62_09240 PF08241 Methyltransferase domain NHY62_09245 PF00561 alpha/beta hydrolase fold NHY62_09250 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY62_09260 PF02575 YbaB/EbfC DNA-binding family NHY62_09265 PF02132 RecR protein NHY62_09265 PF13662 Toprim domain NHY62_09270 PF01612 3'-5' exonuclease NHY62_09270 PF00570 HRDC domain NHY62_09290 PF05166 YcgL domain NHY62_09300 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_09300 PF17862 AAA+ lid domain NHY62_09300 PF01434 Peptidase family M41 NHY62_09310 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_09315 PF05175 Methyltransferase small domain NHY62_09325 PF00990 Diguanylate cyclase, GGDEF domain NHY62_09325 PF08448 PAS fold NHY62_09340 PF04055 Radical SAM superfamily NHY62_09345 PF00676 Dehydrogenase E1 component NHY62_09350 PF02780 Transketolase, C-terminal domain NHY62_09350 PF02779 Transketolase, pyrimidine binding domain NHY62_09355 PF00364 Biotin-requiring enzyme NHY62_09355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY62_09355 PF02817 e3 binding domain NHY62_09365 PF00106 short chain dehydrogenase NHY62_09370 PF08240 Alcohol dehydrogenase GroES-like domain NHY62_09370 PF00107 Zinc-binding dehydrogenase NHY62_09380 PF00158 Sigma-54 interaction domain NHY62_09380 PF02954 Bacterial regulatory protein, Fis family NHY62_09380 PF00072 Response regulator receiver domain NHY62_09385 PF04273 Putative phosphatase (DUF442) NHY62_09385 PF00753 Metallo-beta-lactamase superfamily NHY62_09400 PF01925 Sulfite exporter TauE/SafE NHY62_09415 PF06445 GyrI-like small molecule binding domain NHY62_09415 PF12833 Helix-turn-helix domain NHY62_09420 PF01638 HxlR-like helix-turn-helix NHY62_09425 PF02525 Flavodoxin-like fold NHY62_09435 PF00392 Bacterial regulatory proteins, gntR family NHY62_09435 PF07702 UTRA domain NHY62_09450 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY62_09455 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_09460 PF00005 ABC transporter NHY62_09475 PF00083 Sugar (and other) transporter NHY62_09480 PF07715 TonB-dependent Receptor Plug Domain NHY62_09480 PF00593 TonB dependent receptor NHY62_09485 PF10415 Fumarase C C-terminus NHY62_09485 PF00206 Lyase NHY62_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_09500 PF03466 LysR substrate binding domain NHY62_09505 PF03466 LysR substrate binding domain NHY62_09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_09510 PF02803 Thiolase, C-terminal domain NHY62_09510 PF00108 Thiolase, N-terminal domain NHY62_09515 PF02667 Short chain fatty acid transporter NHY62_09520 PF01144 Coenzyme A transferase NHY62_09525 PF01144 Coenzyme A transferase NHY62_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_09530 PF03466 LysR substrate binding domain NHY62_09555 PF12833 Helix-turn-helix domain NHY62_09555 PF06719 AraC-type transcriptional regulator N-terminus NHY62_09565 PF01738 Dienelactone hydrolase family NHY62_09595 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_09595 PF00175 Oxidoreductase NAD-binding domain NHY62_09595 PF00970 Oxidoreductase FAD-binding domain NHY62_09600 PF00866 Ring hydroxylating beta subunit NHY62_09605 PF00355 Rieske [2Fe-2S] domain NHY62_09605 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY62_09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_09610 PF03459 TOBE domain NHY62_09620 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_09625 PF03459 TOBE domain NHY62_09625 PF00005 ABC transporter NHY62_09630 PF00106 short chain dehydrogenase NHY62_09635 PF00550 Phosphopantetheine attachment site NHY62_09635 PF00857 Isochorismatase family NHY62_09645 PF00149 Calcineurin-like phosphoesterase NHY62_09650 PF02503 Polyphosphate kinase middle domain NHY62_09650 PF13090 Polyphosphate kinase C-terminal domain 2 NHY62_09650 PF17941 Polyphosphate kinase C-terminal domain 1 NHY62_09650 PF13089 Polyphosphate kinase N-terminal domain NHY62_09655 PF08042 PqqA family NHY62_09660 PF12706 Beta-lactamase superfamily domain NHY62_09665 PF03070 TENA/THI-4/PQQC family NHY62_09670 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NHY62_09675 PF13186 Iron-sulfur cluster-binding domain NHY62_09675 PF04055 Radical SAM superfamily NHY62_09680 PF01244 Membrane dipeptidase (Peptidase family M19) NHY62_09700 PF13091 PLD-like domain NHY62_09715 PF00199 Catalase NHY62_09725 PF00107 Zinc-binding dehydrogenase NHY62_09725 PF08240 Alcohol dehydrogenase GroES-like domain NHY62_09735 PF00419 Fimbrial protein NHY62_09745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY62_09745 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY62_09755 PF16970 Type-1 fimbrial protein, A NHY62_09775 PF01266 FAD dependent oxidoreductase NHY62_09795 PF00743 Flavin-binding monooxygenase-like NHY62_09800 PF12146 Serine aminopeptidase, S33 NHY62_09805 PF02321 Outer membrane efflux protein NHY62_09815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY62_09815 PF00529 HlyD membrane-fusion protein of T1SS NHY62_09825 PF16527 Two-component sensor protein CpxA, periplasmic domain NHY62_09825 PF00672 HAMP domain NHY62_09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_09825 PF00512 His Kinase A (phospho-acceptor) domain NHY62_09835 PF12833 Helix-turn-helix domain NHY62_09835 PF02311 AraC-like ligand binding domain NHY62_09840 PF12146 Serine aminopeptidase, S33 NHY62_09900 PF01975 Survival protein SurE NHY62_09925 PF07690 Major Facilitator Superfamily NHY62_09930 PF13533 Biotin-lipoyl like NHY62_09940 PF00196 Bacterial regulatory proteins, luxR family NHY62_10050 PF00916 Sulfate permease family NHY62_10050 PF01740 STAS domain NHY62_10065 PF00920 Dehydratase family NHY62_10070 PF00171 Aldehyde dehydrogenase family NHY62_10075 PF00171 Aldehyde dehydrogenase family NHY62_10090 PF00529 HlyD membrane-fusion protein of T1SS NHY62_10090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY62_10125 PF03737 Aldolase/RraA NHY62_10130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY62_10130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY62_10130 PF01842 ACT domain NHY62_10155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_10155 PF03466 LysR substrate binding domain NHY62_10165 PF08450 SMP-30/Gluconolactonase/LRE-like region NHY62_10170 PF07702 UTRA domain NHY62_10170 PF00392 Bacterial regulatory proteins, gntR family NHY62_10180 PF04909 Amidohydrolase NHY62_10185 PF07690 Major Facilitator Superfamily NHY62_10200 PF13018 Extended Signal Peptide of Type V secretion system NHY62_10200 PF13332 Hemagglutinin repeat NHY62_10200 PF05860 haemagglutination activity domain NHY62_10200 PF04829 Pre-toxin domain with VENN motif NHY62_10205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NHY62_10205 PF17287 POTRA domain NHY62_10205 PF08479 POTRA domain, ShlB-type NHY62_10215 PF07687 Peptidase dimerisation domain NHY62_10215 PF01546 Peptidase family M20/M25/M40 NHY62_10230 PF07995 Glucose / Sorbosone dehydrogenase NHY62_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_10235 PF03466 LysR substrate binding domain NHY62_10240 PF00857 Isochorismatase family NHY62_10250 PF08359 YsiA-like protein, C-terminal region NHY62_10250 PF00440 Bacterial regulatory proteins, tetR family NHY62_10255 PF12706 Beta-lactamase superfamily domain NHY62_10265 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_10275 PF00376 MerR family regulatory protein NHY62_10275 PF09278 MerR, DNA binding NHY62_10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_10290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY62_10295 PF01047 MarR family NHY62_10300 PF07859 alpha/beta hydrolase fold NHY62_10315 PF06628 Catalase-related immune-responsive NHY62_10315 PF00199 Catalase NHY62_10320 PF00561 alpha/beta hydrolase fold NHY62_10330 PF00171 Aldehyde dehydrogenase family NHY62_10335 PF08240 Alcohol dehydrogenase GroES-like domain NHY62_10335 PF00107 Zinc-binding dehydrogenase NHY62_10355 PF02954 Bacterial regulatory protein, Fis family NHY62_10355 PF06506 Propionate catabolism activator NHY62_10355 PF00158 Sigma-54 interaction domain NHY62_10365 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_10365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_10365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_10385 PF00171 Aldehyde dehydrogenase family NHY62_10400 PF00920 Dehydratase family NHY62_10405 PF07729 FCD domain NHY62_10405 PF00392 Bacterial regulatory proteins, gntR family NHY62_10420 PF13378 Enolase C-terminal domain-like NHY62_10420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY62_10425 PF02426 Muconolactone delta-isomerase NHY62_10435 PF01144 Coenzyme A transferase NHY62_10440 PF01144 Coenzyme A transferase NHY62_10445 PF02803 Thiolase, C-terminal domain NHY62_10445 PF00108 Thiolase, N-terminal domain NHY62_10450 PF12146 Serine aminopeptidase, S33 NHY62_10460 PF00171 Aldehyde dehydrogenase family NHY62_10470 PF01179 Copper amine oxidase, enzyme domain NHY62_10470 PF07833 Copper amine oxidase N-terminal domain NHY62_10470 PF02727 Copper amine oxidase, N2 domain NHY62_10470 PF02728 Copper amine oxidase, N3 domain NHY62_10475 PF02311 AraC-like ligand binding domain NHY62_10475 PF12833 Helix-turn-helix domain NHY62_10485 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_10485 PF00175 Oxidoreductase NAD-binding domain NHY62_10500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY62_10500 PF00355 Rieske [2Fe-2S] domain NHY62_10520 PF01425 Amidase NHY62_10530 PF07690 Major Facilitator Superfamily NHY62_10540 PF00106 short chain dehydrogenase NHY62_10555 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_10555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_10555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_10560 PF03466 LysR substrate binding domain NHY62_10565 PF09339 IclR helix-turn-helix domain NHY62_10565 PF01614 Bacterial transcriptional regulator NHY62_10570 PF00753 Metallo-beta-lactamase superfamily NHY62_10580 PF04143 Sulphur transport NHY62_10595 PF04966 Carbohydrate-selective porin, OprB family NHY62_10600 PF05048 Periplasmic copper-binding protein (NosD) NHY62_10605 PF01487 Type I 3-dehydroquinase NHY62_10610 PF00775 Dioxygenase NHY62_10615 PF00775 Dioxygenase NHY62_10615 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NHY62_10620 PF02627 Carboxymuconolactone decarboxylase family NHY62_10625 PF07690 Major Facilitator Superfamily NHY62_10630 PF00561 alpha/beta hydrolase fold NHY62_10640 PF02803 Thiolase, C-terminal domain NHY62_10640 PF00108 Thiolase, N-terminal domain NHY62_10645 PF01144 Coenzyme A transferase NHY62_10650 PF01144 Coenzyme A transferase NHY62_10655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NHY62_10665 PF04239 Protein of unknown function (DUF421) NHY62_10675 PF00793 DAHP synthetase I family NHY62_10710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY62_10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_10725 PF00793 DAHP synthetase I family NHY62_10730 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NHY62_10735 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_10735 PF07724 AAA domain (Cdc48 subfamily) NHY62_10735 PF17871 AAA lid domain NHY62_10735 PF02861 Clp amino terminal domain, pathogenicity island component NHY62_10735 PF10431 C-terminal, D2-small domain, of ClpB protein NHY62_10740 PF02617 ATP-dependent Clp protease adaptor protein ClpS NHY62_10750 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY62_10750 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY62_10765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NHY62_10785 PF02253 Phospholipase A1 NHY62_10795 PF07715 TonB-dependent Receptor Plug Domain NHY62_10795 PF00593 TonB dependent receptor NHY62_10800 PF00294 pfkB family carbohydrate kinase NHY62_10820 PF01654 Cytochrome bd terminal oxidase subunit I NHY62_10830 PF08173 Membrane bound YbgT-like protein NHY62_10845 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NHY62_10855 PF02881 SRP54-type protein, helical bundle domain NHY62_10855 PF00448 SRP54-type protein, GTPase domain NHY62_10880 PF00478 IMP dehydrogenase / GMP reductase domain NHY62_10880 PF00571 CBS domain NHY62_10885 PF00202 Aminotransferase class-III NHY62_10890 PF00462 Glutaredoxin NHY62_10900 PF03466 LysR substrate binding domain NHY62_10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_10905 PF00557 Metallopeptidase family M24 NHY62_10910 PF05525 Branched-chain amino acid transport protein NHY62_10935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NHY62_10935 PF05524 PEP-utilising enzyme, N-terminal NHY62_10935 PF00391 PEP-utilising enzyme, mobile domain NHY62_10935 PF02896 PEP-utilising enzyme, TIM barrel domain NHY62_10935 PF00381 PTS HPr component phosphorylation site NHY62_10940 PF00294 pfkB family carbohydrate kinase NHY62_10945 PF02378 Phosphotransferase system, EIIC NHY62_10945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NHY62_10965 PF00990 Diguanylate cyclase, GGDEF domain NHY62_10965 PF00563 EAL domain NHY62_10965 PF03707 Bacterial signalling protein N terminal repeat NHY62_10975 PF07995 Glucose / Sorbosone dehydrogenase NHY62_10980 PF02586 SOS response associated peptidase (SRAP) NHY62_10990 PF05922 Peptidase inhibitor I9 NHY62_10990 PF00082 Subtilase family NHY62_11005 PF00324 Amino acid permease NHY62_11010 PF00266 Aminotransferase class-V NHY62_11015 PF01037 Lrp/AsnC ligand binding domain NHY62_11040 PF13419 Haloacid dehalogenase-like hydrolase NHY62_11045 PF01479 S4 domain NHY62_11050 PF00154 recA bacterial DNA recombination protein NHY62_11055 PF02631 RecX family NHY62_11070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NHY62_11070 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_11075 PF07977 FabA-like domain NHY62_11080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NHY62_11080 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_11095 PF13180 PDZ domain NHY62_11095 PF17820 PDZ domain NHY62_11095 PF02163 Peptidase family M50 NHY62_11100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NHY62_11100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NHY62_11100 PF13288 DXP reductoisomerase C-terminal domain NHY62_11110 PF01255 Putative undecaprenyl diphosphate synthase NHY62_11115 PF01765 Ribosome recycling factor NHY62_11120 PF00696 Amino acid kinase family NHY62_11125 PF04055 Radical SAM superfamily NHY62_11125 PF00919 Uncharacterized protein family UPF0004 NHY62_11125 PF18693 TRAM domain NHY62_11140 PF00072 Response regulator receiver domain NHY62_11140 PF02954 Bacterial regulatory protein, Fis family NHY62_11140 PF00158 Sigma-54 interaction domain NHY62_11160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NHY62_11160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NHY62_11170 PF02542 YgbB family NHY62_11180 PF01266 FAD dependent oxidoreductase NHY62_11205 PF10415 Fumarase C C-terminus NHY62_11205 PF00206 Lyase NHY62_11215 PF02635 DsrE/DsrF-like family NHY62_11235 PF00892 EamA-like transporter family NHY62_11245 PF01638 HxlR-like helix-turn-helix NHY62_11255 PF01967 MoaC family NHY62_11255 PF00994 Probable molybdopterin binding domain NHY62_11260 PF02391 MoaE protein NHY62_11270 PF06463 Molybdenum Cofactor Synthesis C NHY62_11270 PF04055 Radical SAM superfamily NHY62_11275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY62_11275 PF00384 Molybdopterin oxidoreductase NHY62_11275 PF01568 Molydopterin dinucleotide binding domain NHY62_11280 PF12804 MobA-like NTP transferase domain NHY62_11295 PF04324 BFD-like [2Fe-2S] binding domain NHY62_11295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY62_11295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY62_11295 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_11295 PF18267 Rubredoxin NAD+ reductase C-terminal domain NHY62_11295 PF13806 Rieske-like [2Fe-2S] domain NHY62_11305 PF00486 Transcriptional regulatory protein, C terminal NHY62_11305 PF00072 Response regulator receiver domain NHY62_11310 PF00005 ABC transporter NHY62_11330 PF00364 Biotin-requiring enzyme NHY62_11345 PF12832 MFS_1 like family NHY62_11790 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system NHY62_12105 PF01565 FAD binding domain NHY62_12105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NHY62_12110 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY62_12125 PF03061 Thioesterase superfamily NHY62_12135 PF12169 DNA polymerase III subunits gamma and tau domain III NHY62_12135 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NHY62_12135 PF12170 DNA polymerase III tau subunit V interacting with alpha NHY62_12140 PF07690 Major Facilitator Superfamily NHY62_12150 PF00144 Beta-lactamase NHY62_12155 PF01575 MaoC like domain NHY62_12165 PF02803 Thiolase, C-terminal domain NHY62_12165 PF00108 Thiolase, N-terminal domain NHY62_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_12175 PF03466 LysR substrate binding domain NHY62_12180 PF00923 Transaldolase/Fructose-6-phosphate aldolase NHY62_12185 PF01810 LysE type translocator NHY62_12190 PF01037 Lrp/AsnC ligand binding domain NHY62_12200 PF02308 MgtC family NHY62_12205 PF00689 Cation transporting ATPase, C-terminus NHY62_12205 PF00690 Cation transporter/ATPase, N-terminus NHY62_12230 PF00582 Universal stress protein family NHY62_12235 PF00005 ABC transporter NHY62_12235 PF12848 ABC transporter NHY62_12290 PF00924 Mechanosensitive ion channel NHY62_12300 PF00440 Bacterial regulatory proteins, tetR family NHY62_12315 PF01037 Lrp/AsnC ligand binding domain NHY62_12320 PF01817 Chorismate mutase type II NHY62_12340 PF01433 Peptidase family M1 domain NHY62_12340 PF11940 Domain of unknown function (DUF3458) Ig-like fold NHY62_12340 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NHY62_12355 PF02110 Hydroxyethylthiazole kinase family NHY62_12360 PF06445 GyrI-like small molecule binding domain NHY62_12395 PF13520 Amino acid permease NHY62_12400 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NHY62_12410 PF00117 Glutamine amidotransferase class-I NHY62_12410 PF00958 GMP synthase C terminal domain NHY62_12410 PF02540 NAD synthase NHY62_12420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY62_12435 PF00881 Nitroreductase family NHY62_12445 PF17209 Hfq protein NHY62_12460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NHY62_12465 PF00849 RNA pseudouridylate synthase NHY62_12465 PF01479 S4 domain NHY62_12480 PF00849 RNA pseudouridylate synthase NHY62_12480 PF01479 S4 domain NHY62_12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_12495 PF03466 LysR substrate binding domain NHY62_12510 PF07690 Major Facilitator Superfamily NHY62_12515 PF00027 Cyclic nucleotide-binding domain NHY62_12515 PF00520 Ion transport protein NHY62_12525 PF00330 Aconitase family (aconitate hydratase) NHY62_12525 PF06434 Aconitate hydratase 2 N-terminus NHY62_12525 PF11791 Aconitate B N-terminal domain NHY62_12540 PF01103 Surface antigen NHY62_12540 PF07244 Surface antigen variable number repeat NHY62_12540 PF17243 POTRA domain TamA domain 1 NHY62_12545 PF07690 Major Facilitator Superfamily NHY62_12550 PF03232 Ubiquinone biosynthesis protein COQ7 NHY62_12560 PF00120 Glutamine synthetase, catalytic domain NHY62_12565 PF00486 Transcriptional regulatory protein, C terminal NHY62_12565 PF00072 Response regulator receiver domain NHY62_12570 PF00512 His Kinase A (phospho-acceptor) domain NHY62_12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_12570 PF13493 Domain of unknown function (DUF4118) NHY62_12570 PF02702 Osmosensitive K+ channel His kinase sensor domain NHY62_12575 PF02669 K+-transporting ATPase, c chain NHY62_12585 PF03814 Potassium-transporting ATPase A subunit NHY62_12600 PF03109 ABC1 family NHY62_12605 PF00899 ThiF family NHY62_12610 PF01613 Flavin reductase like domain NHY62_12615 PF13193 AMP-binding enzyme C-terminal domain NHY62_12615 PF00501 AMP-binding enzyme NHY62_12620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_12620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_12620 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_12625 PF00106 short chain dehydrogenase NHY62_12630 PF12833 Helix-turn-helix domain NHY62_12640 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_12645 PF17827 PrmC N-terminal domain NHY62_12645 PF13847 Methyltransferase domain NHY62_12650 PF03462 PCRF domain NHY62_12650 PF00472 RF-1 domain NHY62_12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_12660 PF03466 LysR substrate binding domain NHY62_12685 PF13994 PgaD-like protein NHY62_12690 PF00535 Glycosyl transferase family 2 NHY62_12705 PF03618 Kinase/pyrophosphorylase NHY62_12710 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NHY62_12710 PF02896 PEP-utilising enzyme, TIM barrel domain NHY62_12710 PF00391 PEP-utilising enzyme, mobile domain NHY62_12720 PF06481 COX Aromatic Rich Motif NHY62_12720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NHY62_12725 PF00115 Cytochrome C and Quinol oxidase polypeptide I NHY62_12730 PF00510 Cytochrome c oxidase subunit III NHY62_12735 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NHY62_12740 PF01040 UbiA prenyltransferase family NHY62_12745 PF01250 Ribosomal protein S6 NHY62_12750 PF01084 Ribosomal protein S18 NHY62_12755 PF03948 Ribosomal protein L9, C-terminal domain NHY62_12755 PF01281 Ribosomal protein L9, N-terminal domain NHY62_12760 PF00772 DnaB-like helicase N terminal domain NHY62_12760 PF03796 DnaB-like helicase C terminal domain NHY62_12765 PF01168 Alanine racemase, N-terminal domain NHY62_12765 PF00842 Alanine racemase, C-terminal domain NHY62_12775 PF08379 Bacterial transglutaminase-like N-terminal region NHY62_12775 PF01841 Transglutaminase-like superfamily NHY62_12795 PF01134 Glucose inhibited division protein A NHY62_12795 PF13932 GidA associated domain NHY62_12815 PF02954 Bacterial regulatory protein, Fis family NHY62_12820 PF01808 AICARFT/IMPCHase bienzyme NHY62_12820 PF02142 MGS-like domain NHY62_12825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NHY62_12825 PF02843 Phosphoribosylglycinamide synthetase, C domain NHY62_12825 PF02844 Phosphoribosylglycinamide synthetase, N domain NHY62_12830 PF03180 NLPA lipoprotein NHY62_12835 PF00005 ABC transporter NHY62_12835 PF09383 NIL domain NHY62_12845 PF00753 Metallo-beta-lactamase superfamily NHY62_12845 PF16123 Hydroxyacylglutathione hydrolase C-terminus NHY62_12855 PF00375 Sodium:dicarboxylate symporter family NHY62_12910 PF00005 ABC transporter NHY62_12910 PF12848 ABC transporter NHY62_12920 PF07091 Ribosomal RNA methyltransferase (FmrO) NHY62_12945 PF01636 Phosphotransferase enzyme family NHY62_12965 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_12975 PF00893 Small Multidrug Resistance protein NHY62_12990 PF13610 DDE domain NHY62_13060 PF00392 Bacterial regulatory proteins, gntR family NHY62_13060 PF07729 FCD domain NHY62_13070 PF03616 Sodium/glutamate symporter NHY62_13075 PF00561 alpha/beta hydrolase fold NHY62_13100 PF04076 Bacterial OB fold (BOF) protein NHY62_13130 PF00324 Amino acid permease NHY62_13140 PF00202 Aminotransferase class-III NHY62_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_13145 PF03466 LysR substrate binding domain NHY62_13170 PF00069 Protein kinase domain NHY62_13190 PF00814 Glycoprotease family NHY62_13195 PF01165 Ribosomal protein S21 NHY62_13200 PF09424 Yqey-like protein NHY62_13205 PF01435 Peptidase family M48 NHY62_13210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY62_13210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY62_13225 PF00156 Phosphoribosyl transferase domain NHY62_13230 PF02674 Colicin V production protein NHY62_13235 PF01180 Dihydroorotate dehydrogenase NHY62_13255 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NHY62_13255 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NHY62_13270 PF00271 Helicase conserved C-terminal domain NHY62_13270 PF00270 DEAD/DEAH box helicase NHY62_13275 PF00313 'Cold-shock' DNA-binding domain NHY62_13305 PF05690 Thiazole biosynthesis protein ThiG NHY62_13315 PF03883 Peroxide stress protein YaaA NHY62_13325 PF12706 Beta-lactamase superfamily domain NHY62_13345 PF01842 ACT domain NHY62_13345 PF01817 Chorismate mutase type II NHY62_13345 PF00800 Prephenate dehydratase NHY62_13350 PF00756 Putative esterase NHY62_13360 PF00375 Sodium:dicarboxylate symporter family NHY62_13370 PF07023 Protein of unknown function (DUF1315) NHY62_13375 PF01513 ATP-NAD kinase NHY62_13390 PF00293 NUDIX domain NHY62_13400 PF08521 Two-component sensor kinase N-terminal NHY62_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_13400 PF00512 His Kinase A (phospho-acceptor) domain NHY62_13405 PF00072 Response regulator receiver domain NHY62_13405 PF00486 Transcriptional regulatory protein, C terminal NHY62_13425 PF18389 TrmO C-terminal domain NHY62_13425 PF01980 tRNA-methyltransferase O NHY62_13430 PF00970 Oxidoreductase FAD-binding domain NHY62_13430 PF00175 Oxidoreductase NAD-binding domain NHY62_13435 PF02567 Phenazine biosynthesis-like protein NHY62_13440 PF00392 Bacterial regulatory proteins, gntR family NHY62_13440 PF00155 Aminotransferase class I and II NHY62_13445 PF16325 Peptidase family U32 C-terminal domain NHY62_13445 PF01136 Peptidase family U32 NHY62_13450 PF00037 4Fe-4S binding domain NHY62_13460 PF00005 ABC transporter NHY62_13465 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_13475 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY62_13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_13480 PF03466 LysR substrate binding domain NHY62_13495 PF02321 Outer membrane efflux protein NHY62_13530 PF00005 ABC transporter NHY62_13535 PF01061 ABC-2 type transporter NHY62_13540 PF14489 QueF-like protein NHY62_13540 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NHY62_13550 PF01098 Cell cycle protein NHY62_13555 PF13406 Transglycosylase SLT domain NHY62_13560 PF05036 Sporulation related domain NHY62_13560 PF03330 Lytic transglycolase NHY62_13590 PF00889 Elongation factor TS NHY62_13595 PF00318 Ribosomal protein S2 NHY62_13600 PF00557 Metallopeptidase family M24 NHY62_13610 PF07690 Major Facilitator Superfamily NHY62_13625 PF04055 Radical SAM superfamily NHY62_13630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_13630 PF09317 Domain of unknown function (DUF1974) NHY62_13630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_13650 PF02219 Methylenetetrahydrofolate reductase NHY62_13655 PF04452 RNA methyltransferase NHY62_13670 PF01743 Poly A polymerase head domain NHY62_13670 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY62_13680 PF01784 NIF3 (NGG1p interacting factor 3) NHY62_13685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NHY62_13685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NHY62_13720 PF01040 UbiA prenyltransferase family NHY62_13730 PF00120 Glutamine synthetase, catalytic domain NHY62_13730 PF03951 Glutamine synthetase, beta-Grasp domain NHY62_14075 PF00117 Glutamine amidotransferase class-I NHY62_14090 PF02885 Glycosyl transferase family, helical bundle domain NHY62_14090 PF00591 Glycosyl transferase family, a/b domain NHY62_14095 PF00218 Indole-3-glycerol phosphate synthase NHY62_14115 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_14115 PF01799 [2Fe-2S] binding domain NHY62_14120 PF01227 GTP cyclohydrolase I NHY62_14130 PF00144 Beta-lactamase NHY62_14145 PF05675 Protein of unknown function (DUF817) NHY62_14150 PF01208 Uroporphyrinogen decarboxylase (URO-D) NHY62_14160 PF00425 chorismate binding enzyme NHY62_14170 PF00975 Thioesterase domain NHY62_14175 PF00005 ABC transporter NHY62_14190 PF00282 Pyridoxal-dependent decarboxylase conserved domain NHY62_14195 PF00550 Phosphopantetheine attachment site NHY62_14195 PF00857 Isochorismatase family NHY62_14200 PF00501 AMP-binding enzyme NHY62_14200 PF13193 AMP-binding enzyme C-terminal domain NHY62_14205 PF00501 AMP-binding enzyme NHY62_14205 PF13193 AMP-binding enzyme C-terminal domain NHY62_14215 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY62_14220 PF07715 TonB-dependent Receptor Plug Domain NHY62_14220 PF00593 TonB dependent receptor NHY62_14225 PF01497 Periplasmic binding protein NHY62_14230 PF00005 ABC transporter NHY62_14235 PF01032 FecCD transport family NHY62_14240 PF01032 FecCD transport family NHY62_14250 PF13193 AMP-binding enzyme C-terminal domain NHY62_14250 PF00668 Condensation domain NHY62_14250 PF00501 AMP-binding enzyme NHY62_14250 PF00550 Phosphopantetheine attachment site NHY62_14260 PF13309 HTH domain NHY62_14260 PF08348 YheO-like PAS domain NHY62_14270 PF02678 Pirin NHY62_14270 PF17954 Quercetinase C-terminal cupin domain NHY62_14290 PF00440 Bacterial regulatory proteins, tetR family NHY62_14300 PF13378 Enolase C-terminal domain-like NHY62_14300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY62_14305 PF00083 Sugar (and other) transporter NHY62_14310 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NHY62_14355 PF04328 Selenoprotein, putative NHY62_14365 PF01132 Elongation factor P (EF-P) OB domain NHY62_14365 PF08207 Elongation factor P (EF-P) KOW-like domain NHY62_14365 PF09285 Elongation factor P, C-terminal NHY62_14370 PF04055 Radical SAM superfamily NHY62_14385 PF01197 Ribosomal protein L31 NHY62_14390 PF13593 SBF-like CPA transporter family (DUF4137) NHY62_14395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY62_14405 PF13654 AAA domain NHY62_14405 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY62_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_14410 PF03466 LysR substrate binding domain NHY62_14415 PF01476 LysM domain NHY62_14415 PF01551 Peptidase family M23 NHY62_14420 PF01975 Survival protein SurE NHY62_14440 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_14445 PF13344 Haloacid dehalogenase-like hydrolase NHY62_14445 PF00293 NUDIX domain NHY62_14455 PF04356 Protein of unknown function (DUF489) NHY62_14460 PF00206 Lyase NHY62_14460 PF08328 Adenylosuccinate lyase C-terminal NHY62_14475 PF01343 Peptidase family S49 NHY62_14475 PF08496 Peptidase family S49 N-terminal NHY62_14485 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_14490 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_14495 PF12849 PBP superfamily domain NHY62_14500 PF00324 Amino acid permease NHY62_14505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY62_14505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY62_14505 PF00205 Thiamine pyrophosphate enzyme, central domain NHY62_14510 PF01037 Lrp/AsnC ligand binding domain NHY62_14535 PF00440 Bacterial regulatory proteins, tetR family NHY62_14535 PF17754 MftR C-terminal domain NHY62_14545 PF00487 Fatty acid desaturase NHY62_14550 PF00970 Oxidoreductase FAD-binding domain NHY62_14550 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY62_14550 PF00175 Oxidoreductase NAD-binding domain NHY62_14555 PF00440 Bacterial regulatory proteins, tetR family NHY62_14565 PF18337 RapA N-terminal Tudor like domain NHY62_14565 PF00176 SNF2 family N-terminal domain NHY62_14565 PF12137 RNA polymerase recycling family C-terminal NHY62_14565 PF00271 Helicase conserved C-terminal domain NHY62_14565 PF18339 RapA N-terminal Tudor like domain 1 NHY62_14570 PF00849 RNA pseudouridylate synthase NHY62_14580 PF00202 Aminotransferase class-III NHY62_14585 PF02581 Thiamine monophosphate synthase NHY62_14615 PF02567 Phenazine biosynthesis-like protein NHY62_14620 PF00375 Sodium:dicarboxylate symporter family NHY62_14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_14625 PF03466 LysR substrate binding domain NHY62_14630 PF06779 Uncharacterised MFS-type transporter YbfB NHY62_14650 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY62_14660 PF03971 Monomeric isocitrate dehydrogenase NHY62_14675 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_14680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY62_14715 PF02350 UDP-N-acetylglucosamine 2-epimerase NHY62_14730 PF03060 Nitronate monooxygenase NHY62_14740 PF07759 Protein of unknown function (DUF1615) NHY62_14750 PF00696 Amino acid kinase family NHY62_14750 PF01472 PUA domain NHY62_14755 PF01018 GTP1/OBG NHY62_14755 PF01926 50S ribosome-binding GTPase NHY62_14770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY62_14770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY62_14775 PF00892 EamA-like transporter family NHY62_14795 PF00990 Diguanylate cyclase, GGDEF domain NHY62_14795 PF17151 Periplasmic sensor domain NHY62_14835 PF00106 short chain dehydrogenase NHY62_14840 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NHY62_14845 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NHY62_14850 PF11967 Recombination protein O N terminal NHY62_14850 PF02565 Recombination protein O C terminal NHY62_14860 PF07650 KH domain NHY62_14860 PF01926 50S ribosome-binding GTPase NHY62_14865 PF00035 Double-stranded RNA binding motif NHY62_14865 PF14622 Ribonuclease-III-like NHY62_14875 PF10502 Signal peptidase, peptidase S26 NHY62_14880 PF06421 GTP-binding protein LepA C-terminus NHY62_14880 PF03144 Elongation factor Tu domain 2 NHY62_14880 PF00009 Elongation factor Tu GTP binding domain NHY62_14880 PF00679 Elongation factor G C-terminus NHY62_14890 PF13180 PDZ domain NHY62_14895 PF02910 Fumarate reductase flavoprotein C-term NHY62_14895 PF00890 FAD binding domain NHY62_14905 PF02223 Thymidylate kinase NHY62_14910 PF02618 YceG-like family NHY62_14915 PF01063 Amino-transferase class IV NHY62_14930 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_14935 PF00528 Binding-protein-dependent transport system inner membrane component NHY62_14945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_14945 PF03466 LysR substrate binding domain NHY62_14955 PF14602 Hexapeptide repeat of succinyl-transferase NHY62_14955 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NHY62_14955 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_14965 PF06508 Queuosine biosynthesis protein QueC NHY62_14980 PF00578 AhpC/TSA family NHY62_14990 PF01467 Cytidylyltransferase-like NHY62_14990 PF00293 NUDIX domain NHY62_15000 PF01784 NIF3 (NGG1p interacting factor 3) NHY62_15010 PF07690 Major Facilitator Superfamily NHY62_15020 PF01966 HD domain NHY62_15025 PF07499 RuvA, C-terminal domain NHY62_15025 PF01330 RuvA N terminal domain NHY62_15035 PF01546 Peptidase family M20/M25/M40 NHY62_15035 PF07687 Peptidase dimerisation domain NHY62_15040 PF03061 Thioesterase superfamily NHY62_15045 PF01618 MotA/TolQ/ExbB proton channel family NHY62_15050 PF02472 Biopolymer transport protein ExbD/TolR NHY62_15060 PF07676 WD40-like Beta Propeller Repeat NHY62_15060 PF04052 TolB amino-terminal domain NHY62_15065 PF00691 OmpA family NHY62_15110 PF00308 Bacterial dnaA protein NHY62_15110 PF08299 Bacterial dnaA protein helix-turn-helix NHY62_15110 PF11638 DnaA N-terminal domain NHY62_15120 PF00586 AIR synthase related protein, N-terminal domain NHY62_15120 PF02769 AIR synthase related protein, C-terminal domain NHY62_15125 PF00551 Formyl transferase NHY62_15130 PF12697 Alpha/beta hydrolase family NHY62_15135 PF06965 Na+/H+ antiporter 1 NHY62_15135 PF01343 Peptidase family S49 NHY62_15145 PF03772 Competence protein NHY62_15145 PF00753 Metallo-beta-lactamase superfamily NHY62_15145 PF13567 Domain of unknown function (DUF4131) NHY62_15150 PF00005 ABC transporter NHY62_15165 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NHY62_15180 PF00266 Aminotransferase class-V NHY62_15220 PF00535 Glycosyl transferase family 2 NHY62_15240 PF01012 Electron transfer flavoprotein domain NHY62_15240 PF00766 Electron transfer flavoprotein FAD-binding domain NHY62_15245 PF01012 Electron transfer flavoprotein domain NHY62_15250 PF02899 Phage integrase, N-terminal SAM-like domain NHY62_15250 PF00589 Phage integrase family NHY62_15255 PF01810 LysE type translocator NHY62_15260 PF01678 Diaminopimelate epimerase NHY62_15265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NHY62_15265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NHY62_15275 PF00324 Amino acid permease NHY62_15280 PF18073 Rubredoxin metal binding domain NHY62_15295 PF11890 Domain of unknown function (DUF3410) NHY62_15295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY62_15295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY62_15300 PF06803 Protein of unknown function (DUF1232) NHY62_15305 PF02634 FdhD/NarQ family NHY62_15310 PF00384 Molybdopterin oxidoreductase NHY62_15315 PF02595 Glycerate kinase family NHY62_15330 PF00881 Nitroreductase family NHY62_15360 PF00501 AMP-binding enzyme NHY62_15360 PF13193 AMP-binding enzyme C-terminal domain NHY62_15360 PF00668 Condensation domain NHY62_15360 PF00550 Phosphopantetheine attachment site NHY62_15360 PF00975 Thioesterase domain NHY62_15375 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY62_15375 PF03449 Transcription elongation factor, N-terminal NHY62_15380 PF01464 Transglycosylase SLT domain NHY62_15380 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY62_15390 PF01171 PP-loop family NHY62_15395 PF01464 Transglycosylase SLT domain NHY62_15400 PF01435 Peptidase family M48 NHY62_15415 PF03009 Glycerophosphoryl diester phosphodiesterase family NHY62_15420 PF00753 Metallo-beta-lactamase superfamily NHY62_15425 PF01219 Prokaryotic diacylglycerol kinase NHY62_15430 PF00118 TCP-1/cpn60 chaperonin family NHY62_15435 PF00166 Chaperonin 10 Kd subunit NHY62_15445 PF00149 Calcineurin-like phosphoesterase NHY62_15450 PF00781 Diacylglycerol kinase catalytic domain NHY62_15455 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NHY62_15455 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NHY62_15460 PF01266 FAD dependent oxidoreductase NHY62_15460 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NHY62_15470 PF00083 Sugar (and other) transporter NHY62_15485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NHY62_15485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NHY62_15500 PF09423 PhoD-like phosphatase NHY62_15500 PF16655 PhoD-like phosphatase, N-terminal domain NHY62_15520 PF00809 Pterin binding enzyme NHY62_15525 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_15525 PF17862 AAA+ lid domain NHY62_15525 PF06480 FtsH Extracellular NHY62_15525 PF01434 Peptidase family M41 NHY62_15530 PF01728 FtsJ-like methyltransferase NHY62_15535 PF01985 CRS1 / YhbY (CRM) domain NHY62_15550 PF00117 Glutamine amidotransferase class-I NHY62_15550 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NHY62_15555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NHY62_15555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY62_15555 PF02142 MGS-like domain NHY62_15560 PF03449 Transcription elongation factor, N-terminal NHY62_15560 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY62_15565 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_15570 PF00582 Universal stress protein family NHY62_15585 PF09587 Bacterial capsule synthesis protein PGA_cap NHY62_15600 PF00999 Sodium/hydrogen exchanger family NHY62_15615 PF00579 tRNA synthetases class I (W and Y) NHY62_15625 PF08442 ATP-grasp domain NHY62_15625 PF00549 CoA-ligase NHY62_15630 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_15630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY62_15635 PF00364 Biotin-requiring enzyme NHY62_15635 PF02817 e3 binding domain NHY62_15635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY62_15640 PF02779 Transketolase, pyrimidine binding domain NHY62_15640 PF16870 2-oxoglutarate dehydrogenase C-terminal NHY62_15640 PF00676 Dehydrogenase E1 component NHY62_15640 PF16078 2-oxoglutarate dehydrogenase N-terminus NHY62_15655 PF13085 2Fe-2S iron-sulfur cluster binding domain NHY62_15665 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY62_15670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY62_15675 PF00285 Citrate synthase, C-terminal domain NHY62_15685 PF00581 Rhodanese-like domain NHY62_15685 PF17773 UPF0176 acylphosphatase like domain NHY62_15705 PF04546 Sigma-70, non-essential region NHY62_15705 PF04545 Sigma-70, region 4 NHY62_15705 PF04539 Sigma-70 region 3 NHY62_15705 PF04542 Sigma-70 region 2 NHY62_15705 PF00140 Sigma-70 factor, region 1.2 NHY62_15705 PF03979 Sigma-70 factor, region 1.1 NHY62_15710 PF04359 Protein of unknown function (DUF493) NHY62_15715 PF03099 Biotin/lipoate A/B protein ligase family NHY62_15725 PF00465 Iron-containing alcohol dehydrogenase NHY62_15730 PF13520 Amino acid permease NHY62_15735 PF03358 NADPH-dependent FMN reductase NHY62_15740 PF01638 HxlR-like helix-turn-helix NHY62_15745 PF00588 SpoU rRNA Methylase family NHY62_15750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY62_15750 PF14824 Sirohaem biosynthesis protein central NHY62_15750 PF10414 Sirohaem synthase dimerisation region NHY62_15765 PF03548 Outer membrane lipoprotein carrier protein LolA NHY62_15770 PF01016 Ribosomal L27 protein NHY62_15775 PF00829 Ribosomal prokaryotic L21 protein NHY62_15795 PF01569 PAP2 superfamily NHY62_15800 PF00529 HlyD membrane-fusion protein of T1SS NHY62_15800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY62_15805 PF00873 AcrB/AcrD/AcrF family NHY62_15810 PF02321 Outer membrane efflux protein NHY62_15815 PF01906 Putative heavy-metal-binding NHY62_15820 PF01906 Putative heavy-metal-binding NHY62_15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_15860 PF03466 LysR substrate binding domain NHY62_15865 PF00909 Ammonium Transporter Family NHY62_15880 PF00072 Response regulator receiver domain NHY62_15880 PF00486 Transcriptional regulatory protein, C terminal NHY62_15885 PF08019 Phosphoethanolamine transferase EptA/EptB NHY62_15885 PF00884 Sulfatase NHY62_15905 PF01734 Patatin-like phospholipase NHY62_15915 PF01145 SPFH domain / Band 7 family NHY62_15920 PF04237 YjbR NHY62_15925 PF00348 Polyprenyl synthetase NHY62_15930 PF04303 PrpF protein NHY62_15935 PF00324 Amino acid permease NHY62_15945 PF01965 DJ-1/PfpI family NHY62_15955 PF12833 Helix-turn-helix domain NHY62_15955 PF06719 AraC-type transcriptional regulator N-terminus NHY62_15960 PF02673 Bacitracin resistance protein BacA NHY62_15980 PF02525 Flavodoxin-like fold NHY62_15995 PF01507 Phosphoadenosine phosphosulfate reductase family NHY62_16010 PF10150 Ribonuclease E/G family NHY62_16010 PF00575 S1 RNA binding domain NHY62_16015 PF02545 Maf-like protein NHY62_16020 PF04093 rod shape-determining protein MreD NHY62_16025 PF04085 rod shape-determining protein MreC NHY62_16035 PF02686 Glu-tRNAGln amidotransferase C subunit NHY62_16045 PF02934 GatB/GatE catalytic domain NHY62_16045 PF02637 GatB domain NHY62_16075 PF05992 SbmA/BacA-like family NHY62_16080 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_16080 PF13291 ACT domain NHY62_16090 PF01235 Sodium:alanine symporter family NHY62_16105 PF00881 Nitroreductase family NHY62_16115 PF12805 FUSC-like inner membrane protein yccS NHY62_16125 PF00667 FAD binding domain NHY62_16125 PF00258 Flavodoxin NHY62_16125 PF00175 Oxidoreductase NAD-binding domain NHY62_16165 PF03734 L,D-transpeptidase catalytic domain NHY62_16165 PF17969 L,D-transpeptidase C-terminal domain NHY62_16170 PF04304 Protein of unknown function (DUF454) NHY62_16180 PF08085 Entericidin EcnA/B family NHY62_16185 PF01546 Peptidase family M20/M25/M40 NHY62_16185 PF07687 Peptidase dimerisation domain NHY62_16205 PF01584 CheW-like domain NHY62_16210 PF00072 Response regulator receiver domain NHY62_16215 PF00072 Response regulator receiver domain NHY62_16230 PF00873 AcrB/AcrD/AcrF family NHY62_16245 PF03831 PhnA domain NHY62_16245 PF08274 PhnA Zinc-Ribbon NHY62_16250 PF04343 Protein of unknown function, DUF488 NHY62_16260 PF01571 Aminomethyltransferase folate-binding domain NHY62_16265 PF10411 Disulfide bond isomerase protein N-terminus NHY62_16265 PF13098 Thioredoxin-like domain NHY62_16280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY62_16320 PF01741 Large-conductance mechanosensitive channel, MscL NHY62_16325 PF03144 Elongation factor Tu domain 2 NHY62_16325 PF00679 Elongation factor G C-terminus NHY62_16325 PF00009 Elongation factor Tu GTP binding domain NHY62_16345 PF01139 tRNA-splicing ligase RtcB NHY62_16355 PF13505 Outer membrane protein beta-barrel domain NHY62_16355 PF00691 OmpA family NHY62_16375 PF00893 Small Multidrug Resistance protein NHY62_16390 PF01011 PQQ enzyme repeat NHY62_16395 PF04966 Carbohydrate-selective porin, OprB family NHY62_16405 PF12833 Helix-turn-helix domain NHY62_16405 PF02311 AraC-like ligand binding domain NHY62_16410 PF02803 Thiolase, C-terminal domain NHY62_16410 PF00108 Thiolase, N-terminal domain NHY62_16445 PF00083 Sugar (and other) transporter NHY62_16445 PF07690 Major Facilitator Superfamily NHY62_16455 PF02810 SEC-C motif NHY62_16455 PF01043 SecA preprotein cross-linking domain NHY62_16455 PF07516 SecA Wing and Scaffold domain NHY62_16455 PF07517 SecA DEAD-like domain NHY62_16460 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY62_16460 PF00578 AhpC/TSA family NHY62_16465 PF00753 Metallo-beta-lactamase superfamily NHY62_16480 PF08245 Mur ligase middle domain NHY62_16480 PF02875 Mur ligase family, glutamate ligase domain NHY62_16485 PF01039 Carboxyl transferase domain NHY62_16490 PF00290 Tryptophan synthase alpha chain NHY62_16515 PF00291 Pyridoxal-phosphate dependent enzyme NHY62_16520 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NHY62_16530 PF01923 Cobalamin adenosyltransferase NHY62_16550 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NHY62_16555 PF00072 Response regulator receiver domain NHY62_16555 PF00486 Transcriptional regulatory protein, C terminal NHY62_16560 PF00512 His Kinase A (phospho-acceptor) domain NHY62_16560 PF00672 HAMP domain NHY62_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_16575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_16575 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_16575 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY62_16575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_16580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_16580 PF03466 LysR substrate binding domain NHY62_16585 PF00043 Glutathione S-transferase, C-terminal domain NHY62_16585 PF02798 Glutathione S-transferase, N-terminal domain NHY62_16610 PF07715 TonB-dependent Receptor Plug Domain NHY62_16610 PF00593 TonB dependent receptor NHY62_16625 PF17101 Stealth protein CR1, conserved region 1 NHY62_16625 PF17102 Stealth protein CR3, conserved region 3 NHY62_16625 PF11380 Stealth protein CR2, conserved region 2 NHY62_16650 PF13439 Glycosyltransferase Family 4 NHY62_16650 PF00534 Glycosyl transferases group 1 NHY62_16655 PF00535 Glycosyl transferase family 2 NHY62_16660 PF01522 Polysaccharide deacetylase NHY62_16675 PF01063 Amino-transferase class IV NHY62_16680 PF08335 GlnD PII-uridylyltransferase NHY62_16680 PF03710 Glutamate-ammonia ligase adenylyltransferase NHY62_16730 PF01702 Queuine tRNA-ribosyltransferase NHY62_16735 PF02699 Preprotein translocase subunit NHY62_16750 PF04127 DNA / pantothenate metabolism flavoprotein NHY62_16750 PF02441 Flavoprotein NHY62_16755 PF04002 RadC-like JAB domain NHY62_16765 PF02811 PHP domain NHY62_16770 PF04279 Intracellular septation protein A NHY62_16775 PF03795 YCII-related domain NHY62_16785 PF01266 FAD dependent oxidoreductase NHY62_16785 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NHY62_16795 PF04461 Protein of unknown function (DUF520) NHY62_16805 PF03061 Thioesterase superfamily NHY62_16810 PF00085 Thioredoxin NHY62_16815 PF00561 alpha/beta hydrolase fold NHY62_16835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_16835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY62_16870 PF17152 Periplasmic sensor domain NHY62_16870 PF00990 Diguanylate cyclase, GGDEF domain NHY62_16875 PF00691 OmpA family NHY62_16875 PF01389 OmpA-like transmembrane domain NHY62_16880 PF00149 Calcineurin-like phosphoesterase NHY62_16880 PF10518 TAT (twin-arginine translocation) pathway signal sequence NHY62_16885 PF13091 PLD-like domain NHY62_16895 PF16360 GTP-binding GTPase Middle Region NHY62_16895 PF13167 GTP-binding GTPase N-terminal NHY62_16895 PF01926 50S ribosome-binding GTPase NHY62_16915 PF00149 Calcineurin-like phosphoesterase NHY62_16920 PF00398 Ribosomal RNA adenine dimethylase NHY62_16925 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NHY62_16930 PF00572 Ribosomal protein L13 NHY62_16935 PF00380 Ribosomal protein S9/S16 NHY62_16940 PF00043 Glutathione S-transferase, C-terminal domain NHY62_16940 PF13417 Glutathione S-transferase, N-terminal domain NHY62_16945 PF04386 Stringent starvation protein B NHY62_16965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_16965 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_16965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_16970 PF01039 Carboxyl transferase domain NHY62_16990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_16990 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_16990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_17035 PF01066 CDP-alcohol phosphatidyltransferase NHY62_17060 PF00056 lactate/malate dehydrogenase, NAD binding domain NHY62_17060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NHY62_17070 PF01551 Peptidase family M23 NHY62_17070 PF10145 Phage-related minor tail protein NHY62_17070 PF01464 Transglycosylase SLT domain NHY62_17080 PF02562 PhoH-like protein NHY62_17085 PF02130 Uncharacterized protein family UPF0054 NHY62_17110 PF03358 NADPH-dependent FMN reductase NHY62_17115 PF03631 Virulence factor BrkB NHY62_17120 PF00892 EamA-like transporter family NHY62_17125 PF12833 Helix-turn-helix domain NHY62_17130 PF01557 Fumarylacetoacetate (FAA) hydrolase family NHY62_17180 PF01432 Peptidase family M3 NHY62_17185 PF09526 Probable metal-binding protein (DUF2387) NHY62_17215 PF03937 Flavinator of succinate dehydrogenase NHY62_17220 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_17220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_17220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_17225 PF00743 Flavin-binding monooxygenase-like NHY62_17230 PF01196 Ribosomal protein L17 NHY62_17235 PF01000 RNA polymerase Rpb3/RpoA insert domain NHY62_17235 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NHY62_17235 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NHY62_17240 PF00163 Ribosomal protein S4/S9 N-terminal domain NHY62_17240 PF01479 S4 domain NHY62_17245 PF00411 Ribosomal protein S11 NHY62_17250 PF00416 Ribosomal protein S13/S18 NHY62_17255 PF00444 Ribosomal protein L36 NHY62_17265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NHY62_17270 PF00327 Ribosomal protein L30p/L7e NHY62_17275 PF00333 Ribosomal protein S5, N-terminal domain NHY62_17275 PF03719 Ribosomal protein S5, C-terminal domain NHY62_17280 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NHY62_17290 PF00410 Ribosomal protein S8 NHY62_17295 PF00253 Ribosomal protein S14p/S29e NHY62_17300 PF00281 Ribosomal protein L5 NHY62_17300 PF00673 ribosomal L5P family C-terminus NHY62_17305 PF00467 KOW motif NHY62_17305 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NHY62_17310 PF00238 Ribosomal protein L14p/L23e NHY62_17315 PF00366 Ribosomal protein S17 NHY62_17320 PF00831 Ribosomal L29 protein NHY62_17325 PF00252 Ribosomal protein L16p/L10e NHY62_17335 PF00237 Ribosomal protein L22p/L17e NHY62_17340 PF00203 Ribosomal protein S19 NHY62_17350 PF00276 Ribosomal protein L23 NHY62_17355 PF00573 Ribosomal protein L4/L1 family NHY62_17360 PF00297 Ribosomal protein L3 NHY62_17365 PF00338 Ribosomal protein S10p/S20e NHY62_17370 PF00117 Glutamine amidotransferase class-I NHY62_17375 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY62_17380 PF05872 Bacterial protein of unknown function (DUF853) NHY62_17390 PF02082 Transcriptional regulator NHY62_17430 PF00270 DEAD/DEAH box helicase NHY62_17430 PF00271 Helicase conserved C-terminal domain NHY62_17430 PF17191 RecG wedge domain NHY62_17435 PF00156 Phosphoribosyl transferase domain NHY62_17440 PF00293 NUDIX domain NHY62_17445 PF03641 Possible lysine decarboxylase NHY62_17450 PF01544 CorA-like Mg2+ transporter protein NHY62_17460 PF05494 MlaC protein NHY62_17470 PF02405 Permease MlaE NHY62_17475 PF00005 ABC transporter NHY62_17485 PF12343 Cold shock protein DEAD box A NHY62_17485 PF00271 Helicase conserved C-terminal domain NHY62_17485 PF00270 DEAD/DEAH box helicase NHY62_17485 PF03880 DbpA RNA binding domain NHY62_17490 PF00459 Inositol monophosphatase family NHY62_17495 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NHY62_17495 PF02779 Transketolase, pyrimidine binding domain NHY62_17495 PF02780 Transketolase, C-terminal domain NHY62_17500 PF00925 GTP cyclohydrolase II NHY62_17505 PF01218 Coproporphyrinogen III oxidase NHY62_17510 PF01488 Shikimate / quinate 5-dehydrogenase NHY62_17510 PF08501 Shikimate dehydrogenase substrate binding domain NHY62_17510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NHY62_17520 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY62_17520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY62_17520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY62_17520 PF02770 Acyl-CoA dehydrogenase, middle domain NHY62_17530 PF04024 PspC domain NHY62_17535 PF00571 CBS domain NHY62_17560 PF02091 Glycyl-tRNA synthetase alpha subunit NHY62_17575 PF00892 EamA-like transporter family NHY62_17580 PF03466 LysR substrate binding domain NHY62_17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_17595 PF00082 Subtilase family NHY62_17595 PF05922 Peptidase inhibitor I9 NHY62_17610 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NHY62_17615 PF04996 Succinylarginine dihydrolase NHY62_17620 PF00171 Aldehyde dehydrogenase family NHY62_17625 PF04958 Arginine N-succinyltransferase beta subunit NHY62_17630 PF00202 Aminotransferase class-III NHY62_17635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY62_17635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY62_17670 PF13614 AAA domain NHY62_17675 PF01594 AI-2E family transporter NHY62_17680 PF00080 Copper/zinc superoxide dismutase (SODC) NHY62_17690 PF07690 Major Facilitator Superfamily NHY62_17705 PF03992 Antibiotic biosynthesis monooxygenase NHY62_17715 PF02913 FAD linked oxidases, C-terminal domain NHY62_17715 PF01565 FAD binding domain NHY62_17720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY62_17720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY62_17725 PF00892 EamA-like transporter family NHY62_17730 PF00892 EamA-like transporter family NHY62_17740 PF01925 Sulfite exporter TauE/SafE NHY62_17745 PF09157 Pseudouridine synthase II TruB, C-terminal NHY62_17745 PF16198 tRNA pseudouridylate synthase B C-terminal domain NHY62_17745 PF01509 TruB family pseudouridylate synthase (N terminal domain) NHY62_17750 PF03280 Proteobacterial lipase chaperone protein NHY62_17755 PF00561 alpha/beta hydrolase fold NHY62_17760 PF01245 Ribosomal protein L19 NHY62_17765 PF01746 tRNA (Guanine-1)-methyltransferase NHY62_17770 PF05239 PRC-barrel domain NHY62_17770 PF01782 RimM N-terminal domain NHY62_17775 PF00886 Ribosomal protein S16 NHY62_17815 PF02401 LytB protein NHY62_17820 PF00625 Guanylate kinase NHY62_17825 PF01192 RNA polymerase Rpb6 NHY62_17840 PF01042 Endoribonuclease L-PSP NHY62_17845 PF04324 BFD-like [2Fe-2S] binding domain NHY62_17850 PF00210 Ferritin-like domain NHY62_17865 PF07963 Prokaryotic N-terminal methylation motif NHY62_17865 PF00114 Pilin (bacterial filament) NHY62_17890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NHY62_17890 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY62_17905 PF01761 3-dehydroquinate synthase NHY62_17910 PF01202 Shikimate kinase NHY62_17915 PF11741 AMIN domain NHY62_17915 PF00263 Bacterial type II and III secretion system protein NHY62_17915 PF03958 Bacterial type II/III secretion system short domain NHY62_17915 PF07660 Secretin and TonB N terminus short domain NHY62_17930 PF05137 Fimbrial assembly protein (PilN) NHY62_17935 PF11104 Type IV pilus assembly protein PilM; NHY62_17940 PF17092 Penicillin-binding protein OB-like domain NHY62_17940 PF00905 Penicillin binding protein transpeptidase domain NHY62_17940 PF00912 Transglycosylase NHY62_17945 PF13847 Methyltransferase domain NHY62_17955 PF00953 Glycosyl transferase family 4 NHY62_17965 PF01225 Mur ligase family, catalytic domain NHY62_17965 PF02875 Mur ligase family, glutamate ligase domain NHY62_17965 PF08245 Mur ligase middle domain NHY62_17970 PF03717 Penicillin-binding Protein dimerisation domain NHY62_17970 PF00905 Penicillin binding protein transpeptidase domain NHY62_17980 PF01795 MraW methylase family NHY62_17995 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY62_18010 PF00324 Amino acid permease NHY62_18040 PF01545 Cation efflux family NHY62_18045 PF00873 AcrB/AcrD/AcrF family NHY62_18050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY62_18050 PF00529 HlyD membrane-fusion protein of T1SS NHY62_18070 PF04191 Phospholipid methyltransferase NHY62_18095 PF00005 ABC transporter NHY62_18095 PF12848 ABC transporter NHY62_18105 PF00106 short chain dehydrogenase NHY62_18115 PF17674 HHH domain NHY62_18115 PF00575 S1 RNA binding domain NHY62_18115 PF16921 Tex protein YqgF-like domain NHY62_18115 PF09371 Tex-like protein N-terminal domain NHY62_18120 PF00072 Response regulator receiver domain NHY62_18120 PF00486 Transcriptional regulatory protein, C terminal NHY62_18125 PF00672 HAMP domain NHY62_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_18125 PF00512 His Kinase A (phospho-acceptor) domain NHY62_18135 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NHY62_18135 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NHY62_18140 PF00583 Acetyltransferase (GNAT) family NHY62_18160 PF00475 Imidazoleglycerol-phosphate dehydratase NHY62_18165 PF00117 Glutamine amidotransferase class-I NHY62_18180 PF00977 Histidine biosynthesis protein NHY62_18195 PF03992 Antibiotic biosynthesis monooxygenase NHY62_18210 PF01636 Phosphotransferase enzyme family NHY62_18215 PF00977 Histidine biosynthesis protein NHY62_18230 PF00230 Major intrinsic protein NHY62_18255 PF02705 K+ potassium transporter NHY62_18275 PF02525 Flavodoxin-like fold NHY62_18280 PF01638 HxlR-like helix-turn-helix NHY62_18310 PF02311 AraC-like ligand binding domain NHY62_18310 PF12833 Helix-turn-helix domain NHY62_18315 PF00248 Aldo/keto reductase family NHY62_18335 PF03466 LysR substrate binding domain NHY62_18335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_18340 PF07690 Major Facilitator Superfamily NHY62_18365 PF05726 Pirin C-terminal cupin domain NHY62_18365 PF02678 Pirin NHY62_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_18385 PF00202 Aminotransferase class-III NHY62_18390 PF00392 Bacterial regulatory proteins, gntR family NHY62_18390 PF00155 Aminotransferase class I and II NHY62_18405 PF03591 AzlC protein NHY62_18415 PF00436 Single-strand binding protein family NHY62_18430 PF02581 Thiamine monophosphate synthase NHY62_18430 PF08543 Phosphomethylpyrimidine kinase NHY62_18430 PF03070 TENA/THI-4/PQQC family NHY62_18435 PF06942 GlpM protein NHY62_18445 PF08240 Alcohol dehydrogenase GroES-like domain NHY62_18445 PF00107 Zinc-binding dehydrogenase NHY62_18455 PF00005 ABC transporter NHY62_18455 PF17755 UvrA DNA-binding domain NHY62_18455 PF17760 UvrA interaction domain NHY62_18475 PF02028 BCCT, betaine/carnitine/choline family transporter NHY62_18485 PF00474 Sodium:solute symporter family NHY62_18510 PF03358 NADPH-dependent FMN reductase NHY62_18515 PF00296 Luciferase-like monooxygenase NHY62_18520 PF00872 Transposase, Mutator family NHY62_18525 PF01037 Lrp/AsnC ligand binding domain NHY62_18530 PF00857 Isochorismatase family NHY62_18550 PF04452 RNA methyltransferase NHY62_18555 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NHY62_18560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY62_18580 PF17768 RecJ OB domain NHY62_18580 PF02272 DHHA1 domain NHY62_18580 PF01368 DHH family NHY62_18585 PF01243 Pyridoxamine 5'-phosphate oxidase NHY62_18585 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NHY62_18590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY62_18590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY62_18590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY62_18590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY62_18595 PF00478 IMP dehydrogenase / GMP reductase domain NHY62_18595 PF00571 CBS domain NHY62_18600 PF03692 Putative zinc- or iron-chelating domain NHY62_18605 PF01613 Flavin reductase like domain NHY62_18605 PF00258 Flavodoxin NHY62_18625 PF01169 Uncharacterized protein family UPF0016 NHY62_18645 PF01551 Peptidase family M23 NHY62_18655 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NHY62_18665 PF02491 SHS2 domain inserted in FTSA NHY62_18670 PF08478 POTRA domain, FtsQ-type NHY62_18670 PF03799 Cell division protein FtsQ NHY62_18675 PF01820 D-ala D-ala ligase N-terminus NHY62_18675 PF07478 D-ala D-ala ligase C-terminus NHY62_18680 PF02875 Mur ligase family, glutamate ligase domain NHY62_18680 PF01225 Mur ligase family, catalytic domain NHY62_18680 PF08245 Mur ligase middle domain NHY62_18685 PF04101 Glycosyltransferase family 28 C-terminal domain NHY62_18685 PF03033 Glycosyltransferase family 28 N-terminal domain NHY62_18690 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NHY62_18690 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NHY62_18700 PF00593 TonB dependent receptor NHY62_18700 PF07715 TonB-dependent Receptor Plug Domain NHY62_18705 PF00156 Phosphoribosyl transferase domain NHY62_18710 PF03372 Endonuclease/Exonuclease/phosphatase family NHY62_18715 PF03960 ArsC family NHY62_18725 PF07859 alpha/beta hydrolase fold NHY62_18730 PF07694 5TMR of 5TMR-LYT NHY62_18730 PF00990 Diguanylate cyclase, GGDEF domain NHY62_18735 PF11412 Disulphide bond corrector protein DsbC NHY62_18735 PF02683 Cytochrome C biogenesis protein transmembrane region NHY62_18765 PF00576 HIUase/Transthyretin family NHY62_18770 PF00860 Permease family NHY62_18775 PF00860 Permease family NHY62_18785 PF01494 FAD binding domain NHY62_18795 PF04115 Ureidoglycolate lyase NHY62_18800 PF00106 short chain dehydrogenase NHY62_18805 PF01751 Toprim domain NHY62_18805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY62_18805 PF00986 DNA gyrase B subunit, carboxyl terminus NHY62_18805 PF00204 DNA gyrase B NHY62_18810 PF05728 Uncharacterised protein family (UPF0227) NHY62_18835 PF13296 Putative type VI secretion system Rhs element Vgr NHY62_18835 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY62_18835 PF04717 Type VI secretion system, phage-baseplate injector NHY62_18840 PF02600 Disulfide bond formation protein DsbB NHY62_18845 PF04262 Glutamate-cysteine ligase NHY62_18860 PF04286 Protein of unknown function (DUF445) NHY62_18865 PF00155 Aminotransferase class I and II NHY62_18870 PF01554 MatE NHY62_18920 PF00581 Rhodanese-like domain NHY62_18925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY62_18925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NHY62_18930 PF02580 D-Tyr-tRNA(Tyr) deacylase NHY62_18960 PF00885 6,7-dimethyl-8-ribityllumazine synthase NHY62_18965 PF01029 NusB family NHY62_18970 PF00586 AIR synthase related protein, N-terminal domain NHY62_18970 PF02769 AIR synthase related protein, C-terminal domain NHY62_18980 PF12804 MobA-like NTP transferase domain NHY62_18980 PF14602 Hexapeptide repeat of succinyl-transferase NHY62_18980 PF00132 Bacterial transferase hexapeptide (six repeats) NHY62_19005 PF00491 Arginase family NHY62_19010 PF01979 Amidohydrolase family NHY62_19015 PF00324 Amino acid permease NHY62_19020 PF00221 Aromatic amino acid lyase NHY62_19025 PF01175 Urocanase Rossmann-like domain NHY62_19025 PF17391 Urocanase N-terminal domain NHY62_19025 PF17392 Urocanase C-terminal domain NHY62_19030 PF05962 HutD NHY62_19045 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY62_19045 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY62_19055 PF00324 Amino acid permease NHY62_19065 PF14497 Glutathione S-transferase, C-terminal domain NHY62_19065 PF02798 Glutathione S-transferase, N-terminal domain NHY62_19085 PF04463 Protein of unknown function (DUF523) NHY62_19095 PF01758 Sodium Bile acid symporter family NHY62_19100 PF00857 Isochorismatase family NHY62_19105 PF00701 Dihydrodipicolinate synthetase family NHY62_19115 PF01259 SAICAR synthetase NHY62_19125 PF01226 Formate/nitrite transporter NHY62_19130 PF12002 MgsA AAA+ ATPase C terminal NHY62_19130 PF16193 AAA C-terminal domain NHY62_19130 PF00004 ATPase family associated with various cellular activities (AAA) NHY62_19135 PF07995 Glucose / Sorbosone dehydrogenase NHY62_19140 PF03692 Putative zinc- or iron-chelating domain NHY62_19145 PF07043 Protein of unknown function (DUF1328) NHY62_19160 PF10576 Iron-sulfur binding domain of endonuclease III NHY62_19160 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY62_19160 PF14815 NUDIX domain NHY62_19160 PF00633 Helix-hairpin-helix motif NHY62_19175 PF03352 Methyladenine glycosylase NHY62_19185 PF00392 Bacterial regulatory proteins, gntR family NHY62_19185 PF00155 Aminotransferase class I and II NHY62_19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_19200 PF03466 LysR substrate binding domain NHY62_19205 PF00248 Aldo/keto reductase family NHY62_19220 PF01113 Dihydrodipicolinate reductase, N-terminus NHY62_19220 PF05173 Dihydrodipicolinate reductase, C-terminus NHY62_19250 PF08361 MAATS-type transcriptional repressor, C-terminal region NHY62_19250 PF00440 Bacterial regulatory proteins, tetR family NHY62_19260 PF00860 Permease family NHY62_19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY62_19265 PF03466 LysR substrate binding domain NHY62_19280 PF00920 Dehydratase family NHY62_19285 PF00551 Formyl transferase NHY62_19285 PF02911 Formyl transferase, C-terminal domain NHY62_19290 PF01029 NusB family NHY62_19290 PF01189 16S rRNA methyltransferase RsmB/F NHY62_19300 PF00209 Sodium:neurotransmitter symporter family NHY62_19340 PF00579 tRNA synthetases class I (W and Y) NHY62_19350 PF00561 alpha/beta hydrolase fold NHY62_19355 PF01521 Iron-sulphur cluster biosynthesis NHY62_19385 PF09335 SNARE associated Golgi protein NHY62_19400 PF02463 RecF/RecN/SMC N terminal domain NHY62_19410 PF11638 DnaA N-terminal domain NHY62_19410 PF00308 Bacterial dnaA protein NHY62_19410 PF08299 Bacterial dnaA protein helix-turn-helix NHY62_19415 PF00468 Ribosomal protein L34 NHY62_19420 PF00825 Ribonuclease P NHY62_19425 PF01809 Putative membrane protein insertion efficiency factor NHY62_19430 PF02096 60Kd inner membrane protein NHY62_19430 PF14849 YidC periplasmic domain NHY62_19435 PF10396 GTP-binding protein TrmE N-terminus NHY62_19435 PF01926 50S ribosome-binding GTPase NHY62_19435 PF12631 MnmE helical domain NHY62_19440 PF02583 Metal-sensitive transcriptional repressor NHY62_19445 PF01545 Cation efflux family NHY62_19445 PF16916 Dimerisation domain of Zinc Transporter NHY62_19450 PF10411 Disulfide bond isomerase protein N-terminus NHY62_19450 PF13098 Thioredoxin-like domain NHY62_19460 PF00156 Phosphoribosyl transferase domain NHY62_19470 PF00355 Rieske [2Fe-2S] domain NHY62_19475 PF03738 Glutathionylspermidine synthase preATP-grasp NHY62_19485 PF03741 Integral membrane protein TerC family NHY62_19490 PF01569 PAP2 superfamily NHY62_19500 PF01225 Mur ligase family, catalytic domain NHY62_19500 PF02875 Mur ligase family, glutamate ligase domain NHY62_19500 PF08245 Mur ligase middle domain NHY62_19510 PF00731 AIR carboxylase NHY62_19515 PF02222 ATP-grasp domain NHY62_19515 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NHY62_19520 PF13406 Transglycosylase SLT domain NHY62_19590 PF08751 TrwC relaxase NHY62_19590 PF18340 DNA relaxase TraI 2B/2B-like domain NHY62_19590 PF07057 DNA helicase TraI NHY62_19590 PF18272 single-stranded DNA binding TraI N-terminal subdomain NHY62_19630 PF13737 Transposase DDE domain NHY62_19650 PF02796 Helix-turn-helix domain of resolvase NHY62_19650 PF00239 Resolvase, N terminal domain NHY62_19665 PF01464 Transglycosylase SLT domain NHY62_19700 PF10411 Disulfide bond isomerase protein N-terminus NHY62_19700 PF13098 Thioredoxin-like domain NHY62_19735 PF06834 TraU protein NHY62_19745 PF06986 Type-1V conjugative transfer system mating pair stabilisation NHY62_19760 PF06122 Conjugative relaxosome accessory transposon protein NHY62_19785 PF13438 Domain of unknown function (DUF4113) NHY62_19785 PF00817 impB/mucB/samB family NHY62_19785 PF11799 impB/mucB/samB family C-terminal domain NHY62_19875 PF00565 Staphylococcal nuclease homologue NHY62_19880 PF00816 H-NS histone family NHY62_19935 PF13614 AAA domain NHY62_19940 PF02195 ParB-like nuclease domain NHY62_19940 PF17762 HTH domain found in ParB protein NHY62_19960 PF05816 Toxic anion resistance protein (TelA)