locus-tag class description NHY65_00005 PF14572 Phosphoribosyl synthetase-associated domain NHY65_00005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY65_00010 PF01386 Ribosomal L25p family NHY65_00015 PF01195 Peptidyl-tRNA hydrolase NHY65_00020 PF02261 Aspartate decarboxylase NHY65_00035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY65_00045 PF03070 TENA/THI-4/PQQC family NHY65_00045 PF02581 Thiamine monophosphate synthase NHY65_00045 PF08543 Phosphomethylpyrimidine kinase NHY65_00050 PF04972 BON domain NHY65_00050 PF01476 LysM domain NHY65_00055 PF00550 Phosphopantetheine attachment site NHY65_00065 PF00698 Acyl transferase domain NHY65_00070 PF01783 Ribosomal L32p protein family NHY65_00075 PF02620 Large ribosomal RNA subunit accumulation protein YceD NHY65_00080 PF04315 Elongation factor P hydroxylase NHY65_00085 PF01300 Telomere recombination NHY65_00090 PF02616 Segregation and condensation protein ScpA NHY65_00095 PF04079 Segregation and condensation complex subunit ScpB NHY65_00100 PF00849 RNA pseudouridylate synthase NHY65_00100 PF01479 S4 domain NHY65_00115 PF00155 Aminotransferase class I and II NHY65_00120 PF00202 Aminotransferase class-III NHY65_00120 PF06968 Biotin and Thiamin Synthesis associated domain NHY65_00120 PF04055 Radical SAM superfamily NHY65_00125 PF12697 Alpha/beta hydrolase family NHY65_00125 PF08241 Methyltransferase domain NHY65_00130 PF02358 Trehalose-phosphatase NHY65_00135 PF00982 Glycosyltransferase family 20 NHY65_00140 PF07690 Major Facilitator Superfamily NHY65_00145 PF00210 Ferritin-like domain NHY65_00150 PF00533 BRCA1 C Terminus (BRCT) domain NHY65_00150 PF01653 NAD-dependent DNA ligase adenylation domain NHY65_00150 PF03120 NAD-dependent DNA ligase OB-fold domain NHY65_00150 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NHY65_00150 PF12826 Helix-hairpin-helix motif NHY65_00170 PF01925 Sulfite exporter TauE/SafE NHY65_00180 PF03309 Type III pantothenate kinase NHY65_00185 PF00448 SRP54-type protein, GTPase domain NHY65_00185 PF02978 Signal peptide binding domain NHY65_00185 PF02881 SRP54-type protein, helical bundle domain NHY65_00195 PF01207 Dihydrouridine synthase (Dus) NHY65_00225 PF00692 dUTPase NHY65_00240 PF01048 Phosphorylase superfamily NHY65_00245 PF10609 NUBPL iron-transfer P-loop NTPase NHY65_00255 PF09334 tRNA synthetases class I (M) NHY65_00255 PF01588 Putative tRNA binding domain NHY65_00280 PF13533 Biotin-lipoyl like NHY65_00285 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_00300 PF05552 Conserved TM helix NHY65_00315 PF00175 Oxidoreductase NAD-binding domain NHY65_00315 PF00970 Oxidoreductase FAD-binding domain NHY65_00320 PF03466 LysR substrate binding domain NHY65_00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_00325 PF00313 'Cold-shock' DNA-binding domain NHY65_00335 PF00361 Proton-conducting membrane transporter NHY65_00340 PF00361 Proton-conducting membrane transporter NHY65_00345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NHY65_00345 PF00361 Proton-conducting membrane transporter NHY65_00350 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY65_00355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NHY65_00360 PF12838 4Fe-4S dicluster domain NHY65_00370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY65_00370 PF00384 Molybdopterin oxidoreductase NHY65_00370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NHY65_00375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NHY65_00375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NHY65_00375 PF10531 SLBB domain NHY65_00385 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NHY65_00385 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NHY65_00390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NHY65_00395 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NHY65_00400 PF00990 Diguanylate cyclase, GGDEF domain NHY65_00400 PF17151 Periplasmic sensor domain NHY65_00410 PF00512 His Kinase A (phospho-acceptor) domain NHY65_00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_00410 PF00672 HAMP domain NHY65_00425 PF03477 ATP cone domain NHY65_00425 PF02867 Ribonucleotide reductase, barrel domain NHY65_00425 PF00317 Ribonucleotide reductase, all-alpha domain NHY65_00435 PF00268 Ribonucleotide reductase, small chain NHY65_00445 PF00672 HAMP domain NHY65_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_00445 PF13756 Stimulus-sensing domain NHY65_00445 PF13755 Sensor N-terminal transmembrane domain NHY65_00445 PF00512 His Kinase A (phospho-acceptor) domain NHY65_00540 PF02567 Phenazine biosynthesis-like protein NHY65_00570 PF08267 Cobalamin-independent synthase, N-terminal domain NHY65_00570 PF01717 Cobalamin-independent synthase, Catalytic domain NHY65_00585 PF01810 LysE type translocator NHY65_00595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NHY65_00595 PF12833 Helix-turn-helix domain NHY65_00600 PF07687 Peptidase dimerisation domain NHY65_00600 PF01546 Peptidase family M20/M25/M40 NHY65_00610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_00610 PF03466 LysR substrate binding domain NHY65_00615 PF07690 Major Facilitator Superfamily NHY65_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_00625 PF03466 LysR substrate binding domain NHY65_00630 PF14537 Cytochrome c3 NHY65_00630 PF00890 FAD binding domain NHY65_00640 PF02515 CoA-transferase family III NHY65_00645 PF07690 Major Facilitator Superfamily NHY65_00650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_00650 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_00650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_00655 PF03466 LysR substrate binding domain NHY65_00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_00660 PF00107 Zinc-binding dehydrogenase NHY65_00660 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_00690 PF02445 Quinolinate synthetase A protein NHY65_00695 PF01960 ArgJ family NHY65_00700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY65_00700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY65_00705 PF00893 Small Multidrug Resistance protein NHY65_00720 PF00394 Multicopper oxidase NHY65_00720 PF07731 Multicopper oxidase NHY65_00720 PF07732 Multicopper oxidase NHY65_00735 PF00834 Ribulose-phosphate 3 epimerase family NHY65_00745 PF00756 Putative esterase NHY65_00755 PF04445 Putative SAM-dependent methyltransferase NHY65_00760 PF00814 Glycoprotease family NHY65_00770 PF00293 NUDIX domain NHY65_00810 PF04715 Anthranilate synthase component I, N terminal region NHY65_00810 PF00425 chorismate binding enzyme NHY65_00820 PF00815 Histidinol dehydrogenase NHY65_00825 PF01634 ATP phosphoribosyltransferase NHY65_00830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY65_00835 PF01722 BolA-like protein NHY65_00840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NHY65_00845 PF04552 Sigma-54, DNA binding domain NHY65_00845 PF04963 Sigma-54 factor, core binding domain NHY65_00845 PF00309 Sigma-54 factor, Activator interacting domain (AID) NHY65_00890 PF00795 Carbon-nitrogen hydrolase NHY65_00905 PF02566 OsmC-like protein NHY65_00910 PF00437 Type II/IV secretion system protein NHY65_00930 PF00476 DNA polymerase family A NHY65_00930 PF01612 3'-5' exonuclease NHY65_00930 PF01367 5'-3' exonuclease, C-terminal SAM fold NHY65_00930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NHY65_00950 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NHY65_00955 PF02541 Ppx/GppA phosphatase family NHY65_00960 PF00085 Thioredoxin NHY65_00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY65_00965 PF07498 Rho termination factor, N-terminal domain NHY65_00965 PF07497 Rho termination factor, RNA-binding domain NHY65_00980 PF00216 Bacterial DNA-binding protein NHY65_00985 PF03483 B3/4 domain NHY65_00985 PF03484 tRNA synthetase B5 domain NHY65_00985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NHY65_00985 PF01588 Putative tRNA binding domain NHY65_00985 PF03147 Ferredoxin-fold anticodon binding domain NHY65_00990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NHY65_00990 PF01409 tRNA synthetases class II core domain (F) NHY65_01010 PF00453 Ribosomal protein L20 NHY65_01015 PF01632 Ribosomal protein L35 NHY65_01025 PF07690 Major Facilitator Superfamily NHY65_01030 PF09335 SNARE associated Golgi protein NHY65_01035 PF02798 Glutathione S-transferase, N-terminal domain NHY65_01035 PF00043 Glutathione S-transferase, C-terminal domain NHY65_01040 PF00707 Translation initiation factor IF-3, C-terminal domain NHY65_01040 PF05198 Translation initiation factor IF-3, N-terminal domain NHY65_01045 PF02824 TGS domain NHY65_01045 PF03129 Anticodon binding domain NHY65_01045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY65_01045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY65_01050 PF00501 AMP-binding enzyme NHY65_01050 PF13193 AMP-binding enzyme C-terminal domain NHY65_01055 PF04751 Protein of unknown function (DUF615) NHY65_01060 PF00381 PTS HPr component phosphorylation site NHY65_01065 PF03668 P-loop ATPase protein family NHY65_01075 PF02548 Ketopantoate hydroxymethyltransferase NHY65_01080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NHY65_01110 PF05958 tRNA (Uracil-5-)-methyltransferase NHY65_01120 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_01130 PF00378 Enoyl-CoA hydratase/isomerase NHY65_01135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY65_01135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY65_01140 PF01261 Xylose isomerase-like TIM barrel NHY65_01150 PF00106 short chain dehydrogenase NHY65_01160 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NHY65_01165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NHY65_01165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NHY65_01170 PF00892 EamA-like transporter family NHY65_01180 PF07690 Major Facilitator Superfamily NHY65_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_01195 PF03466 LysR substrate binding domain NHY65_01220 PF01026 TatD related DNase NHY65_01235 PF00009 Elongation factor Tu GTP binding domain NHY65_01235 PF03144 Elongation factor Tu domain 2 NHY65_01235 PF16658 Class II release factor RF3, C-terminal domain NHY65_01255 PF00563 EAL domain NHY65_01255 PF00990 Diguanylate cyclase, GGDEF domain NHY65_01255 PF03707 Bacterial signalling protein N terminal repeat NHY65_01260 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NHY65_01260 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NHY65_01265 PF10369 Small subunit of acetolactate synthase NHY65_01270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY65_01270 PF00205 Thiamine pyrophosphate enzyme, central domain NHY65_01270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY65_01280 PF09334 tRNA synthetases class I (M) NHY65_01280 PF13603 Leucyl-tRNA synthetase, Domain 2 NHY65_01280 PF00133 tRNA synthetases class I (I, L, M and V) NHY65_01280 PF08264 Anticodon-binding domain of tRNA NHY65_01295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY65_01305 PF02321 Outer membrane efflux protein NHY65_01320 PF00929 Exonuclease NHY65_01325 PF03193 RsgA GTPase NHY65_01335 PF00462 Glutaredoxin NHY65_01340 PF02556 Preprotein translocase subunit SecB NHY65_01355 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY65_01355 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY65_01370 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY65_01370 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY65_01380 PF04820 Tryptophan halogenase NHY65_01415 PF00501 AMP-binding enzyme NHY65_01415 PF13193 AMP-binding enzyme C-terminal domain NHY65_01425 PF00550 Phosphopantetheine attachment site NHY65_01430 PF00550 Phosphopantetheine attachment site NHY65_01450 PF13360 PQQ-like domain NHY65_01465 PF04551 GcpE protein NHY65_01470 PF13464 Domain of unknown function (DUF4115) NHY65_01480 PF04055 Radical SAM superfamily NHY65_01485 PF00334 Nucleoside diphosphate kinase NHY65_01490 PF04384 Iron-sulphur cluster assembly NHY65_01495 PF01569 PAP2 superfamily NHY65_01505 PF11818 C-terminal domain of tail specific protease (DUF3340) NHY65_01505 PF00595 PDZ domain NHY65_01505 PF03572 Peptidase family S41 NHY65_01505 PF17804 Tail specific protease N-terminal domain NHY65_01510 PF00933 Glycosyl hydrolase family 3 N terminal domain NHY65_01520 PF00561 alpha/beta hydrolase fold NHY65_01525 PF00171 Aldehyde dehydrogenase family NHY65_01530 PF00171 Aldehyde dehydrogenase family NHY65_01535 PF01202 Shikimate kinase NHY65_01545 PF01081 KDPG and KHG aldolase NHY65_01565 PF05681 Fumarate hydratase (Fumerase) NHY65_01565 PF05683 Fumarase C-terminus NHY65_01580 PF06689 ClpX C4-type zinc finger NHY65_01580 PF10431 C-terminal, D2-small domain, of ClpB protein NHY65_01580 PF07724 AAA domain (Cdc48 subfamily) NHY65_01585 PF00574 Clp protease NHY65_01590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY65_01590 PF05698 Bacterial trigger factor protein (TF) C-terminus NHY65_01590 PF05697 Bacterial trigger factor protein (TF) NHY65_01605 PF00682 HMGL-like NHY65_01605 PF08502 LeuA allosteric (dimerisation) domain NHY65_01610 PF00561 alpha/beta hydrolase fold NHY65_01615 PF07021 Methionine biosynthesis protein MetW NHY65_01615 PF00561 alpha/beta hydrolase fold NHY65_01625 PF01725 Ham1 family NHY65_01635 PF02416 mttA/Hcf106 family NHY65_01640 PF02416 mttA/Hcf106 family NHY65_01645 PF00902 Sec-independent protein translocase protein (TatC) NHY65_01680 PF00303 Thymidylate synthase NHY65_01685 PF00186 Dihydrofolate reductase NHY65_01695 PF01625 Peptide methionine sulfoxide reductase NHY65_01705 PF01618 MotA/TolQ/ExbB proton channel family NHY65_01715 PF01842 ACT domain NHY65_01715 PF00551 Formyl transferase NHY65_01725 PF00171 Aldehyde dehydrogenase family NHY65_01730 PF00830 Ribosomal L28 family NHY65_01735 PF00471 Ribosomal protein L33 NHY65_01760 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NHY65_01765 PF13361 UvrD-like helicase C-terminal domain NHY65_01765 PF00580 UvrD/REP helicase N-terminal domain NHY65_01790 PF01638 HxlR-like helix-turn-helix NHY65_01795 PF00107 Zinc-binding dehydrogenase NHY65_01795 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_01800 PF04102 SlyX NHY65_01805 PF16326 ABC transporter C-terminal domain NHY65_01805 PF12848 ABC transporter NHY65_01805 PF00005 ABC transporter NHY65_01810 PF01810 LysE type translocator NHY65_01825 PF00375 Sodium:dicarboxylate symporter family NHY65_01835 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY65_01835 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY65_01865 PF01176 Translation initiation factor 1A / IF-1 NHY65_01880 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY65_01890 PF00694 Aconitase C-terminal domain NHY65_01895 PF00330 Aconitase family (aconitate hydratase) NHY65_01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_01905 PF03466 LysR substrate binding domain NHY65_01925 PF00293 NUDIX domain NHY65_01930 PF01590 GAF domain NHY65_01930 PF05524 PEP-utilising enzyme, N-terminal NHY65_01930 PF00391 PEP-utilising enzyme, mobile domain NHY65_01930 PF02896 PEP-utilising enzyme, TIM barrel domain NHY65_01935 PF00141 Peroxidase NHY65_01940 PF12706 Beta-lactamase superfamily domain NHY65_01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_01945 PF03466 LysR substrate binding domain NHY65_01955 PF02798 Glutathione S-transferase, N-terminal domain NHY65_01960 PF08279 HTH domain NHY65_01960 PF13280 WYL domain NHY65_01965 PF13419 Haloacid dehalogenase-like hydrolase NHY65_01970 PF00849 RNA pseudouridylate synthase NHY65_01970 PF01479 S4 domain NHY65_01975 PF12111 Polyribonucleotide phosphorylase C terminal NHY65_01975 PF10150 Ribonuclease E/G family NHY65_01975 PF00575 S1 RNA binding domain NHY65_01980 PF00501 AMP-binding enzyme NHY65_01980 PF13193 AMP-binding enzyme C-terminal domain NHY65_01995 PF03466 LysR substrate binding domain NHY65_01995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_02000 PF00106 short chain dehydrogenase NHY65_02005 PF04055 Radical SAM superfamily NHY65_02005 PF06969 HemN C-terminal domain NHY65_02015 PF01554 MatE NHY65_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_02025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY65_02035 PF01197 Ribosomal protein L31 NHY65_02050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NHY65_02070 PF03884 DNA gyrase inhibitor YacG NHY65_02075 PF00753 Metallo-beta-lactamase superfamily NHY65_02080 PF00762 Ferrochelatase NHY65_02085 PF00762 Ferrochelatase NHY65_02095 PF01177 Asp/Glu/Hydantoin racemase NHY65_02110 PF01206 Sulfurtransferase TusA NHY65_02120 PF00795 Carbon-nitrogen hydrolase NHY65_02125 PF01588 Putative tRNA binding domain NHY65_02130 PF13737 Transposase DDE domain NHY65_02140 PF08334 Type II secretion system (T2SS), protein G NHY65_02140 PF07963 Prokaryotic N-terminal methylation motif NHY65_02145 PF00482 Type II secretion system (T2SS), protein F NHY65_02155 PF00999 Sodium/hydrogen exchanger family NHY65_02155 PF02254 TrkA-N domain NHY65_02160 PF01430 Hsp33 protein NHY65_02170 PF00226 DnaJ domain NHY65_02170 PF01556 DnaJ C terminal domain NHY65_02180 PF01544 CorA-like Mg2+ transporter protein NHY65_02185 PF00575 S1 RNA binding domain NHY65_02185 PF00013 KH domain NHY65_02185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NHY65_02185 PF01138 3' exoribonuclease family, domain 1 NHY65_02185 PF03725 3' exoribonuclease family, domain 2 NHY65_02190 PF00312 Ribosomal protein S15 NHY65_02195 PF00144 Beta-lactamase NHY65_02200 PF13538 UvrD-like helicase C-terminal domain NHY65_02210 PF17946 RecC C-terminal domain NHY65_02220 PF03976 Polyphosphate kinase 2 (PPK2) NHY65_02230 PF01209 ubiE/COQ5 methyltransferase family NHY65_02245 PF01494 FAD binding domain NHY65_02250 PF01502 Phosphoribosyl-AMP cyclohydrolase NHY65_02270 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY65_02275 PF00361 Proton-conducting membrane transporter NHY65_02280 PF01899 Na+/H+ ion antiporter subunit NHY65_02285 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NHY65_02290 PF03334 Na+/H+ antiporter subunit NHY65_02295 PF02033 Ribosome-binding factor A NHY65_02300 PF00009 Elongation factor Tu GTP binding domain NHY65_02300 PF11987 Translation-initiation factor 2 NHY65_02300 PF08364 Bacterial translation initiation factor IF-2 associated region NHY65_02300 PF04760 Translation initiation factor IF-2, N-terminal region NHY65_02305 PF13184 NusA-like KH domain NHY65_02305 PF08529 NusA N-terminal domain NHY65_02305 PF00575 S1 RNA binding domain NHY65_02310 PF02576 RimP N-terminal domain NHY65_02310 PF17384 RimP C-terminal SH3 domain NHY65_02335 PF00121 Triosephosphate isomerase NHY65_02340 PF00437 Type II/IV secretion system protein NHY65_02340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NHY65_02345 PF00482 Type II secretion system (T2SS), protein F NHY65_02355 PF06750 Bacterial Peptidase A24 N-terminal domain NHY65_02355 PF01478 Type IV leader peptidase family NHY65_02370 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY65_02370 PF00588 SpoU rRNA Methylase family NHY65_02375 PF06865 Pyrimidine/purine nucleoside phosphorylase NHY65_02390 PF02622 Uncharacterized ACR, COG1678 NHY65_02395 PF03652 Holliday junction resolvase NHY65_02400 PF13533 Biotin-lipoyl like NHY65_02425 PF02805 Metal binding domain of Ada NHY65_02425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY65_02425 PF12833 Helix-turn-helix domain NHY65_02425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY65_02430 PF01066 CDP-alcohol phosphatidyltransferase NHY65_02440 PF02151 UvrB/uvrC motif NHY65_02440 PF08459 UvrC Helix-hairpin-helix N-terminal NHY65_02440 PF01541 GIY-YIG catalytic domain NHY65_02460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY65_02460 PF00378 Enoyl-CoA hydratase/isomerase NHY65_02460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY65_02465 PF02803 Thiolase, C-terminal domain NHY65_02465 PF00108 Thiolase, N-terminal domain NHY65_02485 PF00376 MerR family regulatory protein NHY65_02485 PF09278 MerR, DNA binding NHY65_02495 PF01323 DSBA-like thioredoxin domain NHY65_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_02510 PF00183 Hsp90 protein NHY65_02555 PF04561 RNA polymerase Rpb2, domain 2 NHY65_02555 PF04563 RNA polymerase beta subunit NHY65_02555 PF10385 RNA polymerase beta subunit external 1 domain NHY65_02555 PF00562 RNA polymerase Rpb2, domain 6 NHY65_02555 PF04560 RNA polymerase Rpb2, domain 7 NHY65_02555 PF04565 RNA polymerase Rpb2, domain 3 NHY65_02560 PF00542 Ribosomal protein L7/L12 C-terminal domain NHY65_02560 PF16320 Ribosomal protein L7/L12 dimerisation domain NHY65_02565 PF00466 Ribosomal protein L10 NHY65_02570 PF00687 Ribosomal protein L1p/L10e family NHY65_02575 PF00298 Ribosomal protein L11, RNA binding domain NHY65_02575 PF03946 Ribosomal protein L11, N-terminal domain NHY65_02580 PF00467 KOW motif NHY65_02580 PF02357 Transcription termination factor nusG NHY65_02585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NHY65_02595 PF03144 Elongation factor Tu domain 2 NHY65_02595 PF03143 Elongation factor Tu C-terminal domain NHY65_02595 PF00009 Elongation factor Tu GTP binding domain NHY65_02625 PF13419 Haloacid dehalogenase-like hydrolase NHY65_02630 PF12401 Protein of unknown function (DUF2662) NHY65_02630 PF00498 FHA domain NHY65_02635 PF00263 Bacterial type II and III secretion system protein NHY65_02635 PF03958 Bacterial type II/III secretion system short domain NHY65_02675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NHY65_02675 PF03900 Porphobilinogen deaminase, C-terminal domain NHY65_02680 PF04397 LytTr DNA-binding domain NHY65_02680 PF00072 Response regulator receiver domain NHY65_02690 PF00206 Lyase NHY65_02690 PF14698 Argininosuccinate lyase C-terminal NHY65_02695 PF04362 Bacterial Fe(2+) trafficking NHY65_02700 PF01895 PhoU domain NHY65_02705 PF02321 Outer membrane efflux protein NHY65_02710 PF00892 EamA-like transporter family NHY65_02725 PF13667 ThiC-associated domain NHY65_02725 PF01964 Radical SAM ThiC family NHY65_02730 PF00293 NUDIX domain NHY65_02740 PF01258 Prokaryotic dksA/traR C4-type zinc finger NHY65_02745 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY65_02750 PF01098 Cell cycle protein NHY65_02755 PF08245 Mur ligase middle domain NHY65_02755 PF02875 Mur ligase family, glutamate ligase domain NHY65_02765 PF07664 Ferrous iron transport protein B C terminus NHY65_02765 PF02421 Ferrous iron transport protein B NHY65_02765 PF07670 Nucleoside recognition NHY65_02785 PF00742 Homoserine dehydrogenase NHY65_02785 PF03447 Homoserine dehydrogenase, NAD binding domain NHY65_02785 PF01842 ACT domain NHY65_02790 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_02795 PF00768 D-alanyl-D-alanine carboxypeptidase NHY65_02800 PF00196 Bacterial regulatory proteins, luxR family NHY65_02800 PF00072 Response regulator receiver domain NHY65_02810 PF02954 Bacterial regulatory protein, Fis family NHY65_02810 PF00072 Response regulator receiver domain NHY65_02810 PF00158 Sigma-54 interaction domain NHY65_02815 PF03572 Peptidase family S41 NHY65_02815 PF00595 PDZ domain NHY65_02820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NHY65_02820 PF01676 Metalloenzyme superfamily NHY65_02825 PF03739 Lipopolysaccharide export system permease LptF/LptG NHY65_02855 PF00677 Lumazine binding domain NHY65_02865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY65_02865 PF01872 RibD C-terminal domain NHY65_02870 PF03477 ATP cone domain NHY65_02875 PF00909 Ammonium Transporter Family NHY65_02880 PF00543 Nitrogen regulatory protein P-II NHY65_02900 PF01636 Phosphotransferase enzyme family NHY65_02905 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NHY65_02925 PF00440 Bacterial regulatory proteins, tetR family NHY65_02925 PF02909 Tetracyclin repressor-like, C-terminal domain NHY65_02970 PF01740 STAS domain NHY65_02970 PF00916 Sulfate permease family NHY65_02975 PF00582 Universal stress protein family NHY65_03010 PF00155 Aminotransferase class I and II NHY65_03010 PF00392 Bacterial regulatory proteins, gntR family NHY65_03020 PF00701 Dihydrodipicolinate synthetase family NHY65_03035 PF03573 outer membrane porin, OprD family NHY65_03040 PF00719 Inorganic pyrophosphatase NHY65_03070 PF03458 UPF0126 domain NHY65_03075 PF02810 SEC-C motif NHY65_03085 PF03641 Possible lysine decarboxylase NHY65_03090 PF07690 Major Facilitator Superfamily NHY65_03100 PF00817 impB/mucB/samB family NHY65_03100 PF11799 impB/mucB/samB family C-terminal domain NHY65_03100 PF11798 IMS family HHH motif NHY65_03120 PF11842 Domain of unknown function (DUF3362) NHY65_03120 PF04055 Radical SAM superfamily NHY65_03120 PF08497 Radical SAM N-terminal NHY65_03140 PF03358 NADPH-dependent FMN reductase NHY65_03150 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_03210 PF01327 Polypeptide deformylase NHY65_03225 PF01300 Telomere recombination NHY65_03230 PF00892 EamA-like transporter family NHY65_03235 PF00440 Bacterial regulatory proteins, tetR family NHY65_03240 PF07690 Major Facilitator Superfamily NHY65_03250 PF00255 Glutathione peroxidase NHY65_03260 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NHY65_03265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY65_03265 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY65_03275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY65_03275 PF00306 ATP synthase alpha/beta chain, C terminal domain NHY65_03275 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY65_03280 PF00213 ATP synthase delta (OSCP) subunit NHY65_03285 PF00430 ATP synthase B/B' CF(0) NHY65_03290 PF00137 ATP synthase subunit C NHY65_03295 PF00119 ATP synthase A chain NHY65_03315 PF00005 ABC transporter NHY65_03320 PF00950 ABC 3 transport family NHY65_03325 PF01810 LysE type translocator NHY65_03330 PF04261 Dyp-type peroxidase family NHY65_03340 PF03949 Malic enzyme, NAD binding domain NHY65_03340 PF00390 Malic enzyme, N-terminal domain NHY65_03365 PF05726 Pirin C-terminal cupin domain NHY65_03365 PF02678 Pirin NHY65_03375 PF03551 Transcriptional regulator PadR-like family NHY65_03380 PF13427 Domain of unknown function (DUF4111) NHY65_03380 PF01909 Nucleotidyltransferase domain NHY65_03385 PF00117 Glutamine amidotransferase class-I NHY65_03385 PF00958 GMP synthase C terminal domain NHY65_03385 PF02540 NAD synthase NHY65_03390 PF04286 Protein of unknown function (DUF445) NHY65_03395 PF07681 DoxX NHY65_03400 PF09335 SNARE associated Golgi protein NHY65_03415 PF13614 AAA domain NHY65_03425 PF01722 BolA-like protein NHY65_03440 PF01648 4'-phosphopantetheinyl transferase superfamily NHY65_03445 PF12697 Alpha/beta hydrolase family NHY65_03465 PF16197 Ketoacyl-synthetase C-terminal extension NHY65_03465 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY65_03465 PF14765 Polyketide synthase dehydratase NHY65_03465 PF00550 Phosphopantetheine attachment site NHY65_03465 PF08242 Methyltransferase domain NHY65_03465 PF00975 Thioesterase domain NHY65_03465 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY65_03475 PF00501 AMP-binding enzyme NHY65_03480 PF00196 Bacterial regulatory proteins, luxR family NHY65_03480 PF03472 Autoinducer binding domain NHY65_03490 PF00765 Autoinducer synthase NHY65_03505 PF00378 Enoyl-CoA hydratase/isomerase NHY65_03510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_03510 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_03510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_03515 PF00501 AMP-binding enzyme NHY65_03515 PF13193 AMP-binding enzyme C-terminal domain NHY65_03520 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY65_03520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY65_03535 PF00324 Amino acid permease NHY65_03545 PF13737 Transposase DDE domain NHY65_03550 PF01042 Endoribonuclease L-PSP NHY65_03555 PF00842 Alanine racemase, C-terminal domain NHY65_03555 PF01168 Alanine racemase, N-terminal domain NHY65_03560 PF01266 FAD dependent oxidoreductase NHY65_03565 PF01037 Lrp/AsnC ligand binding domain NHY65_03575 PF07715 TonB-dependent Receptor Plug Domain NHY65_03575 PF00593 TonB dependent receptor NHY65_03590 PF00849 RNA pseudouridylate synthase NHY65_03600 PF00106 short chain dehydrogenase NHY65_03625 PF13737 Transposase DDE domain NHY65_03640 PF13737 Transposase DDE domain NHY65_03660 PF00285 Citrate synthase, C-terminal domain NHY65_03670 PF00392 Bacterial regulatory proteins, gntR family NHY65_03670 PF07729 FCD domain NHY65_03680 PF00155 Aminotransferase class I and II NHY65_03690 PF01070 FMN-dependent dehydrogenase NHY65_03695 PF07729 FCD domain NHY65_03695 PF00392 Bacterial regulatory proteins, gntR family NHY65_03700 PF02652 L-lactate permease NHY65_03705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY65_03705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY65_03705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY65_03705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY65_03715 PF16363 GDP-mannose 4,6 dehydratase NHY65_03725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY65_03725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY65_03725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY65_03730 PF00483 Nucleotidyl transferase NHY65_03735 PF02397 Bacterial sugar transferase NHY65_03740 PF00534 Glycosyl transferases group 1 NHY65_03740 PF13477 Glycosyl transferase 4-like NHY65_03745 PF00534 Glycosyl transferases group 1 NHY65_03745 PF13439 Glycosyltransferase Family 4 NHY65_03755 PF00534 Glycosyl transferases group 1 NHY65_03755 PF13439 Glycosyltransferase Family 4 NHY65_03760 PF00535 Glycosyl transferase family 2 NHY65_03770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY65_03770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY65_03770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY65_03780 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY65_03785 PF13807 G-rich domain on putative tyrosine kinase NHY65_03785 PF13614 AAA domain NHY65_03785 PF02706 Chain length determinant protein NHY65_03790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY65_03790 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY65_03795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY65_03795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY65_03805 PF01510 N-acetylmuramoyl-L-alanine amidase NHY65_03810 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NHY65_03810 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NHY65_03830 PF03725 3' exoribonuclease family, domain 2 NHY65_03830 PF01138 3' exoribonuclease family, domain 1 NHY65_03835 PF00487 Fatty acid desaturase NHY65_03840 PF00175 Oxidoreductase NAD-binding domain NHY65_03845 PF00440 Bacterial regulatory proteins, tetR family NHY65_03855 PF01323 DSBA-like thioredoxin domain NHY65_03870 PF00106 short chain dehydrogenase NHY65_03885 PF00583 Acetyltransferase (GNAT) family NHY65_03885 PF00696 Amino acid kinase family NHY65_03890 PF09084 NMT1/THI5 like NHY65_03895 PF09084 NMT1/THI5 like NHY65_03900 PF00296 Luciferase-like monooxygenase NHY65_03905 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_03910 PF00005 ABC transporter NHY65_03915 PF08362 YcdC-like protein, C-terminal region NHY65_03915 PF00440 Bacterial regulatory proteins, tetR family NHY65_03920 PF01048 Phosphorylase superfamily NHY65_03930 PF01687 Riboflavin kinase NHY65_03930 PF06574 FAD synthetase NHY65_03940 PF01252 Signal peptidase (SPase) II NHY65_03945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY65_03985 PF00579 tRNA synthetases class I (W and Y) NHY65_03990 PF03702 Anhydro-N-acetylmuramic acid kinase NHY65_03995 PF00561 alpha/beta hydrolase fold NHY65_04000 PF01521 Iron-sulphur cluster biosynthesis NHY65_04020 PF00005 ABC transporter NHY65_04020 PF12848 ABC transporter NHY65_04025 PF09335 SNARE associated Golgi protein NHY65_04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_04035 PF01751 Toprim domain NHY65_04035 PF00204 DNA gyrase B NHY65_04035 PF18053 DNA gyrase B subunit insert domain NHY65_04035 PF00986 DNA gyrase B subunit, carboxyl terminus NHY65_04040 PF02463 RecF/RecN/SMC N terminal domain NHY65_04045 PF00712 DNA polymerase III beta subunit, N-terminal domain NHY65_04045 PF02767 DNA polymerase III beta subunit, central domain NHY65_04045 PF02768 DNA polymerase III beta subunit, C-terminal domain NHY65_04050 PF00308 Bacterial dnaA protein NHY65_04050 PF08299 Bacterial dnaA protein helix-turn-helix NHY65_04050 PF11638 DnaA N-terminal domain NHY65_04055 PF00468 Ribosomal protein L34 NHY65_04060 PF00825 Ribonuclease P NHY65_04065 PF01809 Putative membrane protein insertion efficiency factor NHY65_04075 PF01926 50S ribosome-binding GTPase NHY65_04075 PF12631 MnmE helical domain NHY65_04075 PF10396 GTP-binding protein TrmE N-terminus NHY65_04080 PF02583 Metal-sensitive transcriptional repressor NHY65_04090 PF13098 Thioredoxin-like domain NHY65_04090 PF10411 Disulfide bond isomerase protein N-terminus NHY65_04100 PF00156 Phosphoribosyl transferase domain NHY65_04105 PF01979 Amidohydrolase family NHY65_04110 PF00355 Rieske [2Fe-2S] domain NHY65_04115 PF03738 Glutathionylspermidine synthase preATP-grasp NHY65_04125 PF03741 Integral membrane protein TerC family NHY65_04130 PF01569 PAP2 superfamily NHY65_04140 PF01225 Mur ligase family, catalytic domain NHY65_04140 PF02875 Mur ligase family, glutamate ligase domain NHY65_04140 PF08245 Mur ligase middle domain NHY65_04150 PF00731 AIR carboxylase NHY65_04155 PF02222 ATP-grasp domain NHY65_04155 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NHY65_04185 PF01025 GrpE NHY65_04190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_04190 PF03466 LysR substrate binding domain NHY65_04210 PF07859 alpha/beta hydrolase fold NHY65_04215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY65_04255 PF00209 Sodium:neurotransmitter symporter family NHY65_04265 PF01189 16S rRNA methyltransferase RsmB/F NHY65_04265 PF01029 NusB family NHY65_04270 PF02911 Formyl transferase, C-terminal domain NHY65_04270 PF00551 Formyl transferase NHY65_04275 PF00920 Dehydratase family NHY65_04290 PF03466 LysR substrate binding domain NHY65_04290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_04295 PF00860 Permease family NHY65_04300 PF00311 Phosphoenolpyruvate carboxylase NHY65_04305 PF08361 MAATS-type transcriptional repressor, C-terminal region NHY65_04305 PF00440 Bacterial regulatory proteins, tetR family NHY65_04310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY65_04335 PF05173 Dihydrodipicolinate reductase, C-terminus NHY65_04335 PF01113 Dihydrodipicolinate reductase, N-terminus NHY65_04350 PF00248 Aldo/keto reductase family NHY65_04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_04355 PF03466 LysR substrate binding domain NHY65_04375 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_04375 PF00107 Zinc-binding dehydrogenase NHY65_04380 PF03352 Methyladenine glycosylase NHY65_04395 PF10576 Iron-sulfur binding domain of endonuclease III NHY65_04395 PF00633 Helix-hairpin-helix motif NHY65_04395 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY65_04395 PF14815 NUDIX domain NHY65_04410 PF07043 Protein of unknown function (DUF1328) NHY65_04415 PF03692 Putative zinc- or iron-chelating domain NHY65_04420 PF07995 Glucose / Sorbosone dehydrogenase NHY65_04425 PF00004 ATPase family associated with various cellular activities (AAA) NHY65_04425 PF12002 MgsA AAA+ ATPase C terminal NHY65_04425 PF16193 AAA C-terminal domain NHY65_04430 PF01226 Formate/nitrite transporter NHY65_04440 PF01259 SAICAR synthetase NHY65_04450 PF00701 Dihydrodipicolinate synthetase family NHY65_04455 PF00857 Isochorismatase family NHY65_04460 PF01758 Sodium Bile acid symporter family NHY65_04465 PF01554 MatE NHY65_04470 PF04463 Protein of unknown function (DUF523) NHY65_04475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY65_04485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY65_04490 PF14497 Glutathione S-transferase, C-terminal domain NHY65_04490 PF02798 Glutathione S-transferase, N-terminal domain NHY65_04510 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY65_04510 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY65_04520 PF00392 Bacterial regulatory proteins, gntR family NHY65_04520 PF07702 UTRA domain NHY65_04525 PF05962 HutD NHY65_04530 PF01175 Urocanase Rossmann-like domain NHY65_04530 PF17392 Urocanase C-terminal domain NHY65_04530 PF17391 Urocanase N-terminal domain NHY65_04535 PF00221 Aromatic amino acid lyase NHY65_04540 PF00324 Amino acid permease NHY65_04545 PF01979 Amidohydrolase family NHY65_04550 PF00491 Arginase family NHY65_04565 PF01177 Asp/Glu/Hydantoin racemase NHY65_04570 PF01380 SIS domain NHY65_04580 PF04608 Phosphatidylglycerophosphatase A NHY65_04585 PF00586 AIR synthase related protein, N-terminal domain NHY65_04585 PF02769 AIR synthase related protein, C-terminal domain NHY65_04590 PF01029 NusB family NHY65_04595 PF00885 6,7-dimethyl-8-ribityllumazine synthase NHY65_04600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY65_04600 PF00925 GTP cyclohydrolase II NHY65_04625 PF02580 D-Tyr-tRNA(Tyr) deacylase NHY65_04630 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NHY65_04630 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY65_04635 PF00581 Rhodanese-like domain NHY65_04640 PF02666 Phosphatidylserine decarboxylase NHY65_04645 PF03069 Acetamidase/Formamidase family NHY65_04670 PF00072 Response regulator receiver domain NHY65_04670 PF00486 Transcriptional regulatory protein, C terminal NHY65_04680 PF00106 short chain dehydrogenase NHY65_04685 PF01554 MatE NHY65_04690 PF00155 Aminotransferase class I and II NHY65_04695 PF04286 Protein of unknown function (DUF445) NHY65_04710 PF04262 Glutamate-cysteine ligase NHY65_04715 PF02600 Disulfide bond formation protein DsbB NHY65_04720 PF04717 Type VI secretion system, phage-baseplate injector NHY65_04720 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY65_04720 PF13296 Putative type VI secretion system Rhs element Vgr NHY65_04740 PF05728 Uncharacterised protein family (UPF0227) NHY65_04745 PF00204 DNA gyrase B NHY65_04745 PF00986 DNA gyrase B subunit, carboxyl terminus NHY65_04745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_04745 PF01751 Toprim domain NHY65_04750 PF00106 short chain dehydrogenase NHY65_04755 PF04115 Ureidoglycolate lyase NHY65_04760 PF03561 Allantoicase repeat NHY65_04765 PF01494 FAD binding domain NHY65_04775 PF00860 Permease family NHY65_04780 PF00576 HIUase/Transthyretin family NHY65_04815 PF00990 Diguanylate cyclase, GGDEF domain NHY65_04815 PF07694 5TMR of 5TMR-LYT NHY65_04820 PF07859 alpha/beta hydrolase fold NHY65_04840 PF00156 Phosphoribosyl transferase domain NHY65_04845 PF07715 TonB-dependent Receptor Plug Domain NHY65_04845 PF00593 TonB dependent receptor NHY65_04855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NHY65_04855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NHY65_04865 PF01225 Mur ligase family, catalytic domain NHY65_04865 PF02875 Mur ligase family, glutamate ligase domain NHY65_04865 PF08245 Mur ligase middle domain NHY65_04870 PF07478 D-ala D-ala ligase C-terminus NHY65_04870 PF01820 D-ala D-ala ligase N-terminus NHY65_04875 PF03799 Cell division protein FtsQ NHY65_04875 PF08478 POTRA domain, FtsQ-type NHY65_04880 PF02491 SHS2 domain inserted in FTSA NHY65_04885 PF12327 FtsZ family, C-terminal domain NHY65_04885 PF00091 Tubulin/FtsZ family, GTPase domain NHY65_04890 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NHY65_04900 PF01551 Peptidase family M23 NHY65_04905 PF00456 Transketolase, thiamine diphosphate binding domain NHY65_04905 PF17831 Pyruvate dehydrogenase E1 component middle domain NHY65_04910 PF00364 Biotin-requiring enzyme NHY65_04910 PF02817 e3 binding domain NHY65_04910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY65_04920 PF01169 Uncharacterized protein family UPF0016 NHY65_04940 PF00258 Flavodoxin NHY65_04940 PF01613 Flavin reductase like domain NHY65_04945 PF03692 Putative zinc- or iron-chelating domain NHY65_04950 PF00478 IMP dehydrogenase / GMP reductase domain NHY65_04950 PF00571 CBS domain NHY65_04955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY65_04955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY65_04955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY65_04955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY65_04960 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NHY65_04960 PF01243 Pyridoxamine 5'-phosphate oxidase NHY65_04965 PF01368 DHH family NHY65_04965 PF02272 DHHA1 domain NHY65_04965 PF17768 RecJ OB domain NHY65_04985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY65_04990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NHY65_04995 PF04452 RNA methyltransferase NHY65_05000 PF00924 Mechanosensitive ion channel NHY65_05015 PF00857 Isochorismatase family NHY65_05020 PF01037 Lrp/AsnC ligand binding domain NHY65_05030 PF00296 Luciferase-like monooxygenase NHY65_05050 PF00672 HAMP domain NHY65_05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_05050 PF00512 His Kinase A (phospho-acceptor) domain NHY65_05050 PF01627 Hpt domain NHY65_05050 PF00072 Response regulator receiver domain NHY65_05055 PF04341 Protein of unknown function, DUF485 NHY65_05060 PF00474 Sodium:solute symporter family NHY65_05070 PF02028 BCCT, betaine/carnitine/choline family transporter NHY65_05080 PF00990 Diguanylate cyclase, GGDEF domain NHY65_05095 PF02566 OsmC-like protein NHY65_05105 PF13545 Crp-like helix-turn-helix domain NHY65_05105 PF00027 Cyclic nucleotide-binding domain NHY65_05115 PF00005 ABC transporter NHY65_05115 PF17755 UvrA DNA-binding domain NHY65_05115 PF17760 UvrA interaction domain NHY65_05120 PF00440 Bacterial regulatory proteins, tetR family NHY65_05120 PF16925 Tetracyclin repressor-like, C-terminal domain NHY65_05135 PF06942 GlpM protein NHY65_05140 PF08543 Phosphomethylpyrimidine kinase NHY65_05140 PF03070 TENA/THI-4/PQQC family NHY65_05140 PF02581 Thiamine monophosphate synthase NHY65_05150 PF07690 Major Facilitator Superfamily NHY65_05155 PF00436 Single-strand binding protein family NHY65_05160 PF00589 Phage integrase family NHY65_05160 PF02899 Phage integrase, N-terminal SAM-like domain NHY65_05195 PF00419 Fimbrial protein NHY65_05200 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY65_05200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY65_05205 PF13953 PapC C-terminal domain NHY65_05205 PF13954 PapC N-terminal domain NHY65_05205 PF00577 Outer membrane usher protein NHY65_05210 PF00419 Fimbrial protein NHY65_05235 PF03591 AzlC protein NHY65_05245 PF00324 Amino acid permease NHY65_05250 PF00392 Bacterial regulatory proteins, gntR family NHY65_05250 PF00155 Aminotransferase class I and II NHY65_05255 PF00202 Aminotransferase class-III NHY65_05260 PF00171 Aldehyde dehydrogenase family NHY65_05270 PF00857 Isochorismatase family NHY65_05275 PF02678 Pirin NHY65_05275 PF05726 Pirin C-terminal cupin domain NHY65_05280 PF01593 Flavin containing amine oxidoreductase NHY65_05300 PF07690 Major Facilitator Superfamily NHY65_05330 PF02311 AraC-like ligand binding domain NHY65_05330 PF12833 Helix-turn-helix domain NHY65_05360 PF01638 HxlR-like helix-turn-helix NHY65_05365 PF02525 Flavodoxin-like fold NHY65_05385 PF02705 K+ potassium transporter NHY65_05410 PF00230 Major intrinsic protein NHY65_05425 PF00977 Histidine biosynthesis protein NHY65_05430 PF01636 Phosphotransferase enzyme family NHY65_05460 PF00977 Histidine biosynthesis protein NHY65_05475 PF00117 Glutamine amidotransferase class-I NHY65_05480 PF00475 Imidazoleglycerol-phosphate dehydratase NHY65_05500 PF00583 Acetyltransferase (GNAT) family NHY65_05505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NHY65_05505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NHY65_05515 PF00512 His Kinase A (phospho-acceptor) domain NHY65_05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_05515 PF00672 HAMP domain NHY65_05520 PF00486 Transcriptional regulatory protein, C terminal NHY65_05520 PF00072 Response regulator receiver domain NHY65_05525 PF16921 Tex protein YqgF-like domain NHY65_05525 PF17674 HHH domain NHY65_05525 PF00575 S1 RNA binding domain NHY65_05525 PF09371 Tex-like protein N-terminal domain NHY65_05530 PF01740 STAS domain NHY65_05530 PF00916 Sulfate permease family NHY65_05535 PF00106 short chain dehydrogenase NHY65_05545 PF00005 ABC transporter NHY65_05545 PF12848 ABC transporter NHY65_05570 PF04191 Phospholipid methyltransferase NHY65_05590 PF00529 HlyD membrane-fusion protein of T1SS NHY65_05590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY65_05600 PF01545 Cation efflux family NHY65_05630 PF00324 Amino acid permease NHY65_05645 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY65_05660 PF01795 MraW methylase family NHY65_05670 PF03717 Penicillin-binding Protein dimerisation domain NHY65_05670 PF00905 Penicillin binding protein transpeptidase domain NHY65_05675 PF01225 Mur ligase family, catalytic domain NHY65_05675 PF02875 Mur ligase family, glutamate ligase domain NHY65_05675 PF08245 Mur ligase middle domain NHY65_05680 PF01225 Mur ligase family, catalytic domain NHY65_05680 PF02875 Mur ligase family, glutamate ligase domain NHY65_05680 PF08245 Mur ligase middle domain NHY65_05685 PF00953 Glycosyl transferase family 4 NHY65_05695 PF13847 Methyltransferase domain NHY65_05700 PF00905 Penicillin binding protein transpeptidase domain NHY65_05700 PF17092 Penicillin-binding protein OB-like domain NHY65_05700 PF00912 Transglycosylase NHY65_05705 PF11104 Type IV pilus assembly protein PilM; NHY65_05710 PF05137 Fimbrial assembly protein (PilN) NHY65_05715 PF04350 Pilus assembly protein, PilO NHY65_05725 PF11741 AMIN domain NHY65_05725 PF00263 Bacterial type II and III secretion system protein NHY65_05725 PF03958 Bacterial type II/III secretion system short domain NHY65_05725 PF07660 Secretin and TonB N terminus short domain NHY65_05730 PF01202 Shikimate kinase NHY65_05750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NHY65_05750 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_05765 PF04536 TPM domain NHY65_05775 PF00114 Pilin (bacterial filament) NHY65_05775 PF07963 Prokaryotic N-terminal methylation motif NHY65_05785 PF15864 Protein glycosylation ligase NHY65_05785 PF04932 O-Antigen ligase NHY65_05785 PF11846 Virulence factor membrane-bound polymerase, C-terminal NHY65_05790 PF00210 Ferritin-like domain NHY65_05795 PF04324 BFD-like [2Fe-2S] binding domain NHY65_05800 PF01042 Endoribonuclease L-PSP NHY65_05805 PF13291 ACT domain NHY65_05805 PF04607 Region found in RelA / SpoT proteins NHY65_05805 PF02824 TGS domain NHY65_05815 PF01192 RNA polymerase Rpb6 NHY65_05820 PF00625 Guanylate kinase NHY65_05825 PF02401 LytB protein NHY65_05865 PF00886 Ribosomal protein S16 NHY65_05870 PF05239 PRC-barrel domain NHY65_05870 PF01782 RimM N-terminal domain NHY65_05875 PF01746 tRNA (Guanine-1)-methyltransferase NHY65_05880 PF01245 Ribosomal protein L19 NHY65_05895 PF09157 Pseudouridine synthase II TruB, C-terminal NHY65_05895 PF16198 tRNA pseudouridylate synthase B C-terminal domain NHY65_05895 PF01509 TruB family pseudouridylate synthase (N terminal domain) NHY65_05900 PF01925 Sulfite exporter TauE/SafE NHY65_05910 PF00892 EamA-like transporter family NHY65_05915 PF00892 EamA-like transporter family NHY65_05920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY65_05920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY65_05935 PF03992 Antibiotic biosynthesis monooxygenase NHY65_05940 PF02525 Flavodoxin-like fold NHY65_05950 PF07690 Major Facilitator Superfamily NHY65_05960 PF00080 Copper/zinc superoxide dismutase (SODC) NHY65_05965 PF01594 AI-2E family transporter NHY65_05970 PF13614 AAA domain NHY65_06000 PF00324 Amino acid permease NHY65_06005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY65_06005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY65_06010 PF00202 Aminotransferase class-III NHY65_06015 PF04958 Arginine N-succinyltransferase beta subunit NHY65_06020 PF00171 Aldehyde dehydrogenase family NHY65_06025 PF04996 Succinylarginine dihydrolase NHY65_06030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NHY65_06045 PF05922 Peptidase inhibitor I9 NHY65_06045 PF00082 Subtilase family NHY65_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_06060 PF03466 LysR substrate binding domain NHY65_06065 PF00892 EamA-like transporter family NHY65_06075 PF05746 DALR anticodon binding domain NHY65_06075 PF02092 Glycyl-tRNA synthetase beta subunit NHY65_06080 PF02091 Glycyl-tRNA synthetase alpha subunit NHY65_06105 PF00571 CBS domain NHY65_06120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_06120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_06120 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY65_06120 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_06130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NHY65_06130 PF01488 Shikimate / quinate 5-dehydrogenase NHY65_06130 PF08501 Shikimate dehydrogenase substrate binding domain NHY65_06135 PF01218 Coproporphyrinogen III oxidase NHY65_06140 PF00925 GTP cyclohydrolase II NHY65_06145 PF02780 Transketolase, C-terminal domain NHY65_06145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NHY65_06145 PF02779 Transketolase, pyrimidine binding domain NHY65_06150 PF00459 Inositol monophosphatase family NHY65_06155 PF03880 DbpA RNA binding domain NHY65_06155 PF00270 DEAD/DEAH box helicase NHY65_06155 PF12343 Cold shock protein DEAD box A NHY65_06155 PF00271 Helicase conserved C-terminal domain NHY65_06165 PF00005 ABC transporter NHY65_06190 PF01544 CorA-like Mg2+ transporter protein NHY65_06195 PF03641 Possible lysine decarboxylase NHY65_06200 PF00293 NUDIX domain NHY65_06205 PF00156 Phosphoribosyl transferase domain NHY65_06210 PF00271 Helicase conserved C-terminal domain NHY65_06210 PF17191 RecG wedge domain NHY65_06210 PF00270 DEAD/DEAH box helicase NHY65_06225 PF01553 Acyltransferase NHY65_06235 PF00375 Sodium:dicarboxylate symporter family NHY65_06245 PF01926 50S ribosome-binding GTPase NHY65_06250 PF02082 Transcriptional regulator NHY65_06255 PF00175 Oxidoreductase NAD-binding domain NHY65_06255 PF00042 Globin NHY65_06255 PF00970 Oxidoreductase FAD-binding domain NHY65_06260 PF05872 Bacterial protein of unknown function (DUF853) NHY65_06270 PF00117 Glutamine amidotransferase class-I NHY65_06275 PF00338 Ribosomal protein S10p/S20e NHY65_06280 PF00297 Ribosomal protein L3 NHY65_06285 PF00573 Ribosomal protein L4/L1 family NHY65_06290 PF00276 Ribosomal protein L23 NHY65_06300 PF00203 Ribosomal protein S19 NHY65_06305 PF00237 Ribosomal protein L22p/L17e NHY65_06315 PF00252 Ribosomal protein L16p/L10e NHY65_06320 PF00831 Ribosomal L29 protein NHY65_06325 PF00366 Ribosomal protein S17 NHY65_06330 PF00238 Ribosomal protein L14p/L23e NHY65_06335 PF00467 KOW motif NHY65_06335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NHY65_06340 PF00281 Ribosomal protein L5 NHY65_06340 PF00673 ribosomal L5P family C-terminus NHY65_06345 PF00253 Ribosomal protein S14p/S29e NHY65_06350 PF00410 Ribosomal protein S8 NHY65_06355 PF00347 Ribosomal protein L6 NHY65_06360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NHY65_06365 PF00333 Ribosomal protein S5, N-terminal domain NHY65_06365 PF03719 Ribosomal protein S5, C-terminal domain NHY65_06370 PF00327 Ribosomal protein L30p/L7e NHY65_06380 PF00344 SecY translocase NHY65_06385 PF00444 Ribosomal protein L36 NHY65_06390 PF00416 Ribosomal protein S13/S18 NHY65_06395 PF00411 Ribosomal protein S11 NHY65_06400 PF01479 S4 domain NHY65_06400 PF00163 Ribosomal protein S4/S9 N-terminal domain NHY65_06405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NHY65_06405 PF01000 RNA polymerase Rpb3/RpoA insert domain NHY65_06405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NHY65_06410 PF01196 Ribosomal protein L17 NHY65_06415 PF00743 Flavin-binding monooxygenase-like NHY65_06425 PF03937 Flavinator of succinate dehydrogenase NHY65_06455 PF09526 Probable metal-binding protein (DUF2387) NHY65_06460 PF01432 Peptidase family M3 NHY65_06465 PF00575 S1 RNA binding domain NHY65_06465 PF17876 Cold shock domain NHY65_06465 PF08461 Ribonuclease R winged-helix domain NHY65_06465 PF08206 Ribonuclease B OB domain NHY65_06465 PF00773 RNB domain NHY65_06510 PF01557 Fumarylacetoacetate (FAA) hydrolase family NHY65_06520 PF00892 EamA-like transporter family NHY65_06530 PF03358 NADPH-dependent FMN reductase NHY65_06555 PF02130 Uncharacterized protein family UPF0054 NHY65_06560 PF02562 PhoH-like protein NHY65_06565 PF04055 Radical SAM superfamily NHY65_06565 PF01938 TRAM domain NHY65_06565 PF00919 Uncharacterized protein family UPF0004 NHY65_06580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NHY65_06580 PF00056 lactate/malate dehydrogenase, NAD binding domain NHY65_06600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NHY65_06605 PF01066 CDP-alcohol phosphatidyltransferase NHY65_06650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_06650 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_06650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_06655 PF17932 Tetracyclin repressor-like, C-terminal domain NHY65_06655 PF00440 Bacterial regulatory proteins, tetR family NHY65_06670 PF01039 Carboxyl transferase domain NHY65_06675 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_06675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_06675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_06695 PF04386 Stringent starvation protein B NHY65_06705 PF00380 Ribosomal protein S9/S16 NHY65_06710 PF00572 Ribosomal protein L13 NHY65_06715 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NHY65_06745 PF16360 GTP-binding GTPase Middle Region NHY65_06745 PF13167 GTP-binding GTPase N-terminal NHY65_06745 PF01926 50S ribosome-binding GTPase NHY65_06760 PF00149 Calcineurin-like phosphoesterase NHY65_06760 PF10518 TAT (twin-arginine translocation) pathway signal sequence NHY65_06765 PF01389 OmpA-like transmembrane domain NHY65_06765 PF00691 OmpA family NHY65_06770 PF17152 Periplasmic sensor domain NHY65_06770 PF00990 Diguanylate cyclase, GGDEF domain NHY65_06805 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_06805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY65_06815 PF04273 Putative phosphatase (DUF442) NHY65_06815 PF00753 Metallo-beta-lactamase superfamily NHY65_06820 PF00561 alpha/beta hydrolase fold NHY65_06830 PF03061 Thioesterase superfamily NHY65_06840 PF04461 Protein of unknown function (DUF520) NHY65_06850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NHY65_06850 PF01266 FAD dependent oxidoreductase NHY65_06860 PF03795 YCII-related domain NHY65_06865 PF04279 Intracellular septation protein A NHY65_06870 PF02811 PHP domain NHY65_06875 PF01062 Bestrophin, RFP-TM, chloride channel NHY65_06880 PF04002 RadC-like JAB domain NHY65_06885 PF04127 DNA / pantothenate metabolism flavoprotein NHY65_06885 PF02441 Flavoprotein NHY65_06890 PF02355 Protein export membrane protein NHY65_06890 PF07549 SecD/SecF GG Motif NHY65_06895 PF07549 SecD/SecF GG Motif NHY65_06895 PF13721 SecD export protein N-terminal TM region NHY65_06895 PF02355 Protein export membrane protein NHY65_06900 PF02699 Preprotein translocase subunit NHY65_06905 PF01702 Queuine tRNA-ribosyltransferase NHY65_06920 PF02547 Queuosine biosynthesis protein NHY65_06960 PF08335 GlnD PII-uridylyltransferase NHY65_06960 PF03710 Glutamate-ammonia ligase adenylyltransferase NHY65_06980 PF01522 Polysaccharide deacetylase NHY65_06985 PF00535 Glycosyl transferase family 2 NHY65_07015 PF11380 Stealth protein CR2, conserved region 2 NHY65_07015 PF17101 Stealth protein CR1, conserved region 1 NHY65_07015 PF17102 Stealth protein CR3, conserved region 3 NHY65_07020 PF01336 OB-fold nucleic acid binding domain NHY65_07020 PF00152 tRNA synthetases class II (D, K and N) NHY65_07020 PF02938 GAD domain NHY65_07050 PF06146 Phosphate-starvation-inducible E NHY65_07055 PF00043 Glutathione S-transferase, C-terminal domain NHY65_07055 PF02798 Glutathione S-transferase, N-terminal domain NHY65_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_07060 PF03466 LysR substrate binding domain NHY65_07070 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_07070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_07070 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY65_07070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_07080 PF00512 His Kinase A (phospho-acceptor) domain NHY65_07080 PF00672 HAMP domain NHY65_07085 PF00072 Response regulator receiver domain NHY65_07085 PF00486 Transcriptional regulatory protein, C terminal NHY65_07090 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NHY65_07110 PF01923 Cobalamin adenosyltransferase NHY65_07115 PF07715 TonB-dependent Receptor Plug Domain NHY65_07115 PF00593 TonB dependent receptor NHY65_07120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NHY65_07125 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_07150 PF00290 Tryptophan synthase alpha chain NHY65_07155 PF01039 Carboxyl transferase domain NHY65_07160 PF08245 Mur ligase middle domain NHY65_07160 PF02875 Mur ligase family, glutamate ligase domain NHY65_07175 PF00753 Metallo-beta-lactamase superfamily NHY65_07180 PF00578 AhpC/TSA family NHY65_07180 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY65_07185 PF07517 SecA DEAD-like domain NHY65_07185 PF01043 SecA preprotein cross-linking domain NHY65_07185 PF02810 SEC-C motif NHY65_07185 PF07516 SecA Wing and Scaffold domain NHY65_07225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY65_07225 PF00378 Enoyl-CoA hydratase/isomerase NHY65_07225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY65_07230 PF02803 Thiolase, C-terminal domain NHY65_07230 PF00108 Thiolase, N-terminal domain NHY65_07235 PF02311 AraC-like ligand binding domain NHY65_07235 PF12833 Helix-turn-helix domain NHY65_07245 PF04966 Carbohydrate-selective porin, OprB family NHY65_07255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY65_07255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY65_07265 PF00893 Small Multidrug Resistance protein NHY65_07275 PF02803 Thiolase, C-terminal domain NHY65_07275 PF00108 Thiolase, N-terminal domain NHY65_07285 PF13505 Outer membrane protein beta-barrel domain NHY65_07285 PF00691 OmpA family NHY65_07295 PF01139 tRNA-splicing ligase RtcB NHY65_07305 PF05175 Methyltransferase small domain NHY65_07305 PF08468 Methyltransferase small domain N-terminal NHY65_07310 PF00860 Permease family NHY65_07320 PF01741 Large-conductance mechanosensitive channel, MscL NHY65_07335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NHY65_07335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NHY65_07335 PF06827 Zinc finger found in FPG and IleRS NHY65_07340 PF02245 Methylpurine-DNA glycosylase (MPG) NHY65_07360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY65_07375 PF10411 Disulfide bond isomerase protein N-terminus NHY65_07375 PF13098 Thioredoxin-like domain NHY65_07380 PF01571 Aminomethyltransferase folate-binding domain NHY65_07390 PF04343 Protein of unknown function, DUF488 NHY65_07395 PF03831 PhnA domain NHY65_07395 PF08274 PhnA Zinc-Ribbon NHY65_07400 PF07411 Domain of unknown function (DUF1508) NHY65_07410 PF00873 AcrB/AcrD/AcrF family NHY65_07425 PF00072 Response regulator receiver domain NHY65_07430 PF00072 Response regulator receiver domain NHY65_07435 PF01584 CheW-like domain NHY65_07455 PF01546 Peptidase family M20/M25/M40 NHY65_07455 PF07687 Peptidase dimerisation domain NHY65_07460 PF08085 Entericidin EcnA/B family NHY65_07470 PF04304 Protein of unknown function (DUF454) NHY65_07475 PF17969 L,D-transpeptidase C-terminal domain NHY65_07475 PF03734 L,D-transpeptidase catalytic domain NHY65_07515 PF00667 FAD binding domain NHY65_07515 PF00258 Flavodoxin NHY65_07515 PF00175 Oxidoreductase NAD-binding domain NHY65_07525 PF12805 FUSC-like inner membrane protein yccS NHY65_07535 PF00881 Nitroreductase family NHY65_07555 PF01734 Patatin-like phospholipase NHY65_07560 PF13291 ACT domain NHY65_07560 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_07565 PF05992 SbmA/BacA-like family NHY65_07605 PF01425 Amidase NHY65_07610 PF02686 Glu-tRNAGln amidotransferase C subunit NHY65_07620 PF04085 rod shape-determining protein MreC NHY65_07625 PF04093 rod shape-determining protein MreD NHY65_07630 PF02545 Maf-like protein NHY65_07645 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NHY65_07645 PF06974 Protein of unknown function (DUF1298) NHY65_07650 PF01507 Phosphoadenosine phosphosulfate reductase family NHY65_07665 PF02525 Flavodoxin-like fold NHY65_07685 PF02673 Bacitracin resistance protein BacA NHY65_07690 PF12833 Helix-turn-helix domain NHY65_07690 PF06719 AraC-type transcriptional regulator N-terminus NHY65_07700 PF01965 DJ-1/PfpI family NHY65_07720 PF00348 Polyprenyl synthetase NHY65_07725 PF04237 YjbR NHY65_07730 PF01145 SPFH domain / Band 7 family NHY65_07740 PF01734 Patatin-like phospholipase NHY65_07760 PF08019 Phosphoethanolamine transferase EptA/EptB NHY65_07760 PF00884 Sulfatase NHY65_07765 PF00072 Response regulator receiver domain NHY65_07765 PF00486 Transcriptional regulatory protein, C terminal NHY65_07770 PF00512 His Kinase A (phospho-acceptor) domain NHY65_07770 PF08521 Two-component sensor kinase N-terminal NHY65_07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_07785 PF03466 LysR substrate binding domain NHY65_07825 PF01906 Putative heavy-metal-binding NHY65_07830 PF01906 Putative heavy-metal-binding NHY65_07835 PF02321 Outer membrane efflux protein NHY65_07840 PF00873 AcrB/AcrD/AcrF family NHY65_07845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY65_07845 PF00529 HlyD membrane-fusion protein of T1SS NHY65_07850 PF01569 PAP2 superfamily NHY65_07860 PF00348 Polyprenyl synthetase NHY65_07870 PF00829 Ribosomal prokaryotic L21 protein NHY65_07875 PF01016 Ribosomal L27 protein NHY65_07880 PF03548 Outer membrane lipoprotein carrier protein LolA NHY65_07890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY65_07890 PF02403 Seryl-tRNA synthetase N-terminal domain NHY65_07895 PF14824 Sirohaem biosynthesis protein central NHY65_07895 PF10414 Sirohaem synthase dimerisation region NHY65_07895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY65_07900 PF00588 SpoU rRNA Methylase family NHY65_07905 PF01638 HxlR-like helix-turn-helix NHY65_07910 PF03358 NADPH-dependent FMN reductase NHY65_07920 PF00465 Iron-containing alcohol dehydrogenase NHY65_07930 PF03099 Biotin/lipoate A/B protein ligase family NHY65_07935 PF04359 Protein of unknown function (DUF493) NHY65_07940 PF04546 Sigma-70, non-essential region NHY65_07940 PF03979 Sigma-70 factor, region 1.1 NHY65_07940 PF00140 Sigma-70 factor, region 1.2 NHY65_07940 PF04542 Sigma-70 region 2 NHY65_07940 PF04545 Sigma-70, region 4 NHY65_07940 PF04539 Sigma-70 region 3 NHY65_07960 PF00581 Rhodanese-like domain NHY65_07960 PF17773 UPF0176 acylphosphatase like domain NHY65_07970 PF00285 Citrate synthase, C-terminal domain NHY65_07975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY65_07980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY65_07990 PF13085 2Fe-2S iron-sulfur cluster binding domain NHY65_08005 PF16870 2-oxoglutarate dehydrogenase C-terminal NHY65_08005 PF02779 Transketolase, pyrimidine binding domain NHY65_08005 PF16078 2-oxoglutarate dehydrogenase N-terminus NHY65_08005 PF00676 Dehydrogenase E1 component NHY65_08020 PF08442 ATP-grasp domain NHY65_08020 PF00549 CoA-ligase NHY65_08025 PF02629 CoA binding domain NHY65_08025 PF00549 CoA-ligase NHY65_08030 PF00579 tRNA synthetases class I (W and Y) NHY65_08035 PF05661 Protein of unknown function (DUF808) NHY65_08040 PF04228 Putative neutral zinc metallopeptidase NHY65_08045 PF00999 Sodium/hydrogen exchanger family NHY65_08060 PF09587 Bacterial capsule synthesis protein PGA_cap NHY65_08070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY65_08075 PF00582 Universal stress protein family NHY65_08080 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_08085 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY65_08085 PF03449 Transcription elongation factor, N-terminal NHY65_08095 PF00117 Glutamine amidotransferase class-I NHY65_08095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NHY65_08110 PF01985 CRS1 / YhbY (CRM) domain NHY65_08115 PF01728 FtsJ-like methyltransferase NHY65_08125 PF00809 Pterin binding enzyme NHY65_08145 PF16655 PhoD-like phosphatase, N-terminal domain NHY65_08145 PF09423 PhoD-like phosphatase NHY65_08160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NHY65_08160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NHY65_08175 PF00083 Sugar (and other) transporter NHY65_08180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NHY65_08180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NHY65_08185 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NHY65_08185 PF01266 FAD dependent oxidoreductase NHY65_08195 PF00781 Diacylglycerol kinase catalytic domain NHY65_08200 PF00149 Calcineurin-like phosphoesterase NHY65_08210 PF00166 Chaperonin 10 Kd subunit NHY65_08215 PF00118 TCP-1/cpn60 chaperonin family NHY65_08220 PF01219 Prokaryotic diacylglycerol kinase NHY65_08225 PF00753 Metallo-beta-lactamase superfamily NHY65_08235 PF00873 AcrB/AcrD/AcrF family NHY65_08250 PF01464 Transglycosylase SLT domain NHY65_08255 PF01171 PP-loop family NHY65_08265 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY65_08265 PF01464 Transglycosylase SLT domain NHY65_08315 PF00881 Nitroreductase family NHY65_08335 PF00384 Molybdopterin oxidoreductase NHY65_08340 PF02634 FdhD/NarQ family NHY65_08345 PF06803 Protein of unknown function (DUF1232) NHY65_08350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY65_08350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY65_08350 PF11890 Domain of unknown function (DUF3410) NHY65_08365 PF18073 Rubredoxin metal binding domain NHY65_08380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NHY65_08380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NHY65_08385 PF01678 Diaminopimelate epimerase NHY65_08390 PF01810 LysE type translocator NHY65_08395 PF02899 Phage integrase, N-terminal SAM-like domain NHY65_08395 PF00589 Phage integrase family NHY65_08400 PF01012 Electron transfer flavoprotein domain NHY65_08405 PF01012 Electron transfer flavoprotein domain NHY65_08405 PF00766 Electron transfer flavoprotein FAD-binding domain NHY65_08410 PF03989 DNA gyrase C-terminal domain, beta-propeller NHY65_08410 PF00521 DNA gyrase/topoisomerase IV, subunit A NHY65_08445 PF13533 Biotin-lipoyl like NHY65_08455 PF00266 Aminotransferase class-V NHY65_08470 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NHY65_08480 PF12704 MacB-like periplasmic core domain NHY65_08480 PF02687 FtsX-like permease family NHY65_08485 PF00005 ABC transporter NHY65_08510 PF06965 Na+/H+ antiporter 1 NHY65_08510 PF01343 Peptidase family S49 NHY65_08515 PF12697 Alpha/beta hydrolase family NHY65_08520 PF00551 Formyl transferase NHY65_08525 PF00586 AIR synthase related protein, N-terminal domain NHY65_08525 PF02769 AIR synthase related protein, C-terminal domain NHY65_08535 PF00308 Bacterial dnaA protein NHY65_08535 PF08299 Bacterial dnaA protein helix-turn-helix NHY65_08535 PF11638 DnaA N-terminal domain NHY65_08565 PF00588 SpoU rRNA Methylase family NHY65_08565 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY65_08570 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NHY65_08580 PF00691 OmpA family NHY65_08595 PF02472 Biopolymer transport protein ExbD/TolR NHY65_08600 PF01618 MotA/TolQ/ExbB proton channel family NHY65_08605 PF03061 Thioesterase superfamily NHY65_08610 PF01546 Peptidase family M20/M25/M40 NHY65_08610 PF07687 Peptidase dimerisation domain NHY65_08615 PF05491 RuvB C-terminal winged helix domain NHY65_08615 PF05496 Holliday junction DNA helicase RuvB P-loop domain NHY65_08615 PF17864 RuvB AAA lid domain NHY65_08620 PF07499 RuvA, C-terminal domain NHY65_08620 PF01330 RuvA N terminal domain NHY65_08630 PF02769 AIR synthase related protein, C-terminal domain NHY65_08630 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NHY65_08630 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NHY65_08635 PF07690 Major Facilitator Superfamily NHY65_08645 PF01784 NIF3 (NGG1p interacting factor 3) NHY65_08650 PF00378 Enoyl-CoA hydratase/isomerase NHY65_08655 PF01467 Cytidylyltransferase-like NHY65_08655 PF00293 NUDIX domain NHY65_08665 PF00578 AhpC/TSA family NHY65_08680 PF06508 Queuosine biosynthesis protein QueC NHY65_08690 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_08690 PF14602 Hexapeptide repeat of succinyl-transferase NHY65_08690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NHY65_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_08700 PF03466 LysR substrate binding domain NHY65_08705 PF00005 ABC transporter NHY65_08705 PF12857 TOBE-like domain NHY65_08710 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_08715 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_08730 PF01063 Amino-transferase class IV NHY65_08735 PF02618 YceG-like family NHY65_08740 PF02223 Thymidylate kinase NHY65_08755 PF13180 PDZ domain NHY65_08765 PF06421 GTP-binding protein LepA C-terminus NHY65_08765 PF00679 Elongation factor G C-terminus NHY65_08765 PF00009 Elongation factor Tu GTP binding domain NHY65_08765 PF03144 Elongation factor Tu domain 2 NHY65_08770 PF10502 Signal peptidase, peptidase S26 NHY65_08785 PF07650 KH domain NHY65_08785 PF01926 50S ribosome-binding GTPase NHY65_08795 PF02565 Recombination protein O C terminal NHY65_08795 PF11967 Recombination protein O N terminal NHY65_08800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NHY65_08840 PF00155 Aminotransferase class I and II NHY65_08850 PF17151 Periplasmic sensor domain NHY65_08850 PF00990 Diguanylate cyclase, GGDEF domain NHY65_08860 PF00271 Helicase conserved C-terminal domain NHY65_08860 PF02151 UvrB/uvrC motif NHY65_08860 PF12344 Ultra-violet resistance protein B NHY65_08860 PF17757 UvrB interaction domain NHY65_08860 PF04851 Type III restriction enzyme, res subunit NHY65_08890 PF01018 GTP1/OBG NHY65_08890 PF01926 50S ribosome-binding GTPase NHY65_08895 PF00696 Amino acid kinase family NHY65_08895 PF01472 PUA domain NHY65_08915 PF02954 Bacterial regulatory protein, Fis family NHY65_09245 PF13438 Domain of unknown function (DUF4113) NHY65_09245 PF00817 impB/mucB/samB family NHY65_09245 PF11799 impB/mucB/samB family C-terminal domain NHY65_09245 PF11798 IMS family HHH motif NHY65_09255 PF00589 Phage integrase family NHY65_09260 PF01207 Dihydrouridine synthase (Dus) NHY65_09280 PF02350 UDP-N-acetylglucosamine 2-epimerase NHY65_09310 PF00875 DNA photolyase NHY65_09310 PF03441 FAD binding domain of DNA photolyase NHY65_09315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY65_09325 PF07943 Penicillin-binding protein 5, C-terminal domain NHY65_09325 PF00768 D-alanyl-D-alanine carboxypeptidase NHY65_09335 PF03971 Monomeric isocitrate dehydrogenase NHY65_09340 PF00849 RNA pseudouridylate synthase NHY65_09345 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY65_09365 PF06779 Uncharacterised MFS-type transporter YbfB NHY65_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_09370 PF03466 LysR substrate binding domain NHY65_09375 PF00375 Sodium:dicarboxylate symporter family NHY65_09380 PF02567 Phenazine biosynthesis-like protein NHY65_09410 PF02581 Thiamine monophosphate synthase NHY65_09415 PF00202 Aminotransferase class-III NHY65_09425 PF00849 RNA pseudouridylate synthase NHY65_09440 PF00440 Bacterial regulatory proteins, tetR family NHY65_09445 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY65_09445 PF00175 Oxidoreductase NAD-binding domain NHY65_09445 PF00970 Oxidoreductase FAD-binding domain NHY65_09450 PF00487 Fatty acid desaturase NHY65_09460 PF17754 MftR C-terminal domain NHY65_09460 PF00440 Bacterial regulatory proteins, tetR family NHY65_09470 PF00202 Aminotransferase class-III NHY65_09480 PF00171 Aldehyde dehydrogenase family NHY65_09485 PF01037 Lrp/AsnC ligand binding domain NHY65_09490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY65_09490 PF00205 Thiamine pyrophosphate enzyme, central domain NHY65_09490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY65_09495 PF00324 Amino acid permease NHY65_09500 PF12849 PBP superfamily domain NHY65_09505 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_09510 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_09515 PF00005 ABC transporter NHY65_09530 PF08328 Adenylosuccinate lyase C-terminal NHY65_09530 PF00206 Lyase NHY65_09535 PF04356 Protein of unknown function (DUF489) NHY65_09545 PF13344 Haloacid dehalogenase-like hydrolase NHY65_09545 PF00293 NUDIX domain NHY65_09550 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_09555 PF00768 D-alanyl-D-alanine carboxypeptidase NHY65_09555 PF07943 Penicillin-binding protein 5, C-terminal domain NHY65_09575 PF01476 LysM domain NHY65_09575 PF01551 Peptidase family M23 NHY65_09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_09580 PF03466 LysR substrate binding domain NHY65_09585 PF13654 AAA domain NHY65_09585 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY65_09595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY65_09600 PF13593 SBF-like CPA transporter family (DUF4137) NHY65_09605 PF01197 Ribosomal protein L31 NHY65_09625 PF09285 Elongation factor P, C-terminal NHY65_09625 PF08207 Elongation factor P (EF-P) KOW-like domain NHY65_09625 PF01132 Elongation factor P (EF-P) OB domain NHY65_09630 PF02554 Carbon starvation protein CstA NHY65_09630 PF13722 5TM C-terminal transporter carbon starvation CstA NHY65_09635 PF04328 Selenoprotein, putative NHY65_09670 PF13556 PucR C-terminal helix-turn-helix domain NHY65_09670 PF06018 CodY GAF-like domain NHY65_09670 PF17853 GGDEF-like domain NHY65_09685 PF00171 Aldehyde dehydrogenase family NHY65_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_09700 PF03466 LysR substrate binding domain NHY65_09715 PF00355 Rieske [2Fe-2S] domain NHY65_09715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY65_09720 PF00171 Aldehyde dehydrogenase family NHY65_09730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_09730 PF18113 Rubredoxin binding C-terminal domain NHY65_09735 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_09735 PF18113 Rubredoxin binding C-terminal domain NHY65_09765 PF00892 EamA-like transporter family NHY65_09775 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NHY65_09780 PF00083 Sugar (and other) transporter NHY65_09785 PF13378 Enolase C-terminal domain-like NHY65_09785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY65_09790 PF16197 Ketoacyl-synthetase C-terminal extension NHY65_09790 PF14765 Polyketide synthase dehydratase NHY65_09790 PF00550 Phosphopantetheine attachment site NHY65_09790 PF08659 KR domain NHY65_09790 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY65_09790 PF08990 Erythronolide synthase docking NHY65_09790 PF09277 Erythronolide synthase, docking NHY65_09790 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_09790 PF00698 Acyl transferase domain NHY65_09790 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY65_09795 PF00440 Bacterial regulatory proteins, tetR family NHY65_09815 PF02678 Pirin NHY65_09815 PF17954 Quercetinase C-terminal cupin domain NHY65_09825 PF08348 YheO-like PAS domain NHY65_09825 PF13309 HTH domain NHY65_09835 PF00550 Phosphopantetheine attachment site NHY65_09835 PF00668 Condensation domain NHY65_09835 PF00501 AMP-binding enzyme NHY65_09835 PF13193 AMP-binding enzyme C-terminal domain NHY65_09840 PF00668 Condensation domain NHY65_09840 PF13193 AMP-binding enzyme C-terminal domain NHY65_09840 PF00550 Phosphopantetheine attachment site NHY65_09840 PF00975 Thioesterase domain NHY65_09840 PF00501 AMP-binding enzyme NHY65_09845 PF01032 FecCD transport family NHY65_09850 PF01032 FecCD transport family NHY65_09855 PF00005 ABC transporter NHY65_09860 PF01497 Periplasmic binding protein NHY65_09865 PF07715 TonB-dependent Receptor Plug Domain NHY65_09865 PF00593 TonB dependent receptor NHY65_09875 PF00501 AMP-binding enzyme NHY65_09875 PF00668 Condensation domain NHY65_09875 PF00550 Phosphopantetheine attachment site NHY65_09885 PF00857 Isochorismatase family NHY65_09885 PF00550 Phosphopantetheine attachment site NHY65_09900 PF00005 ABC transporter NHY65_09910 PF00975 Thioesterase domain NHY65_09930 PF01208 Uroporphyrinogen decarboxylase (URO-D) NHY65_09950 PF00144 Beta-lactamase NHY65_09960 PF01227 GTP cyclohydrolase I NHY65_09970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NHY65_09970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NHY65_09985 PF00218 Indole-3-glycerol phosphate synthase NHY65_09990 PF02885 Glycosyl transferase family, helical bundle domain NHY65_09990 PF00591 Glycosyl transferase family, a/b domain NHY65_10005 PF00117 Glutamine amidotransferase class-I NHY65_10015 PF00854 POT family NHY65_10020 PF00120 Glutamine synthetase, catalytic domain NHY65_10020 PF03951 Glutamine synthetase, beta-Grasp domain NHY65_10025 PF04345 Chorismate lyase NHY65_10030 PF01040 UbiA prenyltransferase family NHY65_10065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NHY65_10065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NHY65_10070 PF01784 NIF3 (NGG1p interacting factor 3) NHY65_10075 PF13180 PDZ domain NHY65_10080 PF01743 Poly A polymerase head domain NHY65_10080 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY65_10085 PF00390 Malic enzyme, N-terminal domain NHY65_10085 PF03949 Malic enzyme, NAD binding domain NHY65_10085 PF01515 Phosphate acetyl/butaryl transferase NHY65_10090 PF00563 EAL domain NHY65_10090 PF00990 Diguanylate cyclase, GGDEF domain NHY65_10090 PF03707 Bacterial signalling protein N terminal repeat NHY65_10095 PF04452 RNA methyltransferase NHY65_10100 PF02219 Methylenetetrahydrofolate reductase NHY65_10105 PF05221 S-adenosyl-L-homocysteine hydrolase NHY65_10105 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NHY65_10125 PF04055 Radical SAM superfamily NHY65_10130 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_10130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY65_10140 PF07690 Major Facilitator Superfamily NHY65_10150 PF00557 Metallopeptidase family M24 NHY65_10155 PF00318 Ribosomal protein S2 NHY65_10160 PF00889 Elongation factor TS NHY65_10190 PF03330 Lytic transglycolase NHY65_10190 PF05036 Sporulation related domain NHY65_10195 PF13406 Transglycosylase SLT domain NHY65_10200 PF01098 Cell cycle protein NHY65_10210 PF14489 QueF-like protein NHY65_10210 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NHY65_10215 PF01061 ABC-2 type transporter NHY65_10220 PF00005 ABC transporter NHY65_10255 PF02321 Outer membrane efflux protein NHY65_10265 PF13533 Biotin-lipoyl like NHY65_10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_10270 PF03466 LysR substrate binding domain NHY65_10275 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY65_10280 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_10285 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_10290 PF00005 ABC transporter NHY65_10295 PF00893 Small Multidrug Resistance protein NHY65_10300 PF00037 4Fe-4S binding domain NHY65_10305 PF16325 Peptidase family U32 C-terminal domain NHY65_10305 PF01136 Peptidase family U32 NHY65_10310 PF00155 Aminotransferase class I and II NHY65_10310 PF00392 Bacterial regulatory proteins, gntR family NHY65_10315 PF02567 Phenazine biosynthesis-like protein NHY65_10320 PF00970 Oxidoreductase FAD-binding domain NHY65_10320 PF00175 Oxidoreductase NAD-binding domain NHY65_10325 PF01980 tRNA-methyltransferase O NHY65_10325 PF18389 TrmO C-terminal domain NHY65_10345 PF00486 Transcriptional regulatory protein, C terminal NHY65_10345 PF00072 Response regulator receiver domain NHY65_10350 PF08521 Two-component sensor kinase N-terminal NHY65_10350 PF00512 His Kinase A (phospho-acceptor) domain NHY65_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_10360 PF00293 NUDIX domain NHY65_10370 PF00905 Penicillin binding protein transpeptidase domain NHY65_10370 PF00912 Transglycosylase NHY65_10370 PF14814 Bifunctional transglycosylase second domain NHY65_10375 PF01513 ATP-NAD kinase NHY65_10380 PF07023 Protein of unknown function (DUF1315) NHY65_10385 PF00591 Glycosyl transferase family, a/b domain NHY65_10385 PF02885 Glycosyl transferase family, helical bundle domain NHY65_10390 PF00375 Sodium:dicarboxylate symporter family NHY65_10400 PF00756 Putative esterase NHY65_10410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY65_10420 PF07687 Peptidase dimerisation domain NHY65_10420 PF01546 Peptidase family M20/M25/M40 NHY65_10425 PF12706 Beta-lactamase superfamily domain NHY65_10435 PF03883 Peroxide stress protein YaaA NHY65_10445 PF05690 Thiazole biosynthesis protein ThiG NHY65_10455 PF04241 Protein of unknown function (DUF423) NHY65_10460 PF04542 Sigma-70 region 2 NHY65_10460 PF00140 Sigma-70 factor, region 1.2 NHY65_10460 PF04545 Sigma-70, region 4 NHY65_10475 PF00313 'Cold-shock' DNA-binding domain NHY65_10480 PF00270 DEAD/DEAH box helicase NHY65_10480 PF00271 Helicase conserved C-terminal domain NHY65_10490 PF00881 Nitroreductase family NHY65_10495 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NHY65_10495 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NHY65_10515 PF01180 Dihydroorotate dehydrogenase NHY65_10520 PF02674 Colicin V production protein NHY65_10525 PF00156 Phosphoribosyl transferase domain NHY65_10540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY65_10540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY65_10550 PF09424 Yqey-like protein NHY65_10555 PF01165 Ribosomal protein S21 NHY65_10560 PF00814 Glycoprotease family NHY65_10580 PF00069 Protein kinase domain NHY65_10605 PF03466 LysR substrate binding domain NHY65_10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_10610 PF00202 Aminotransferase class-III NHY65_10615 PF00171 Aldehyde dehydrogenase family NHY65_10620 PF00324 Amino acid permease NHY65_10635 PF13610 DDE domain NHY65_10670 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_10680 PF00893 Small Multidrug Resistance protein NHY65_10685 PF00809 Pterin binding enzyme NHY65_10700 PF07091 Ribosomal RNA methyltransferase (FmrO) NHY65_10715 PF12848 ABC transporter NHY65_10715 PF00005 ABC transporter NHY65_10720 PF01636 Phosphotransferase enzyme family NHY65_10730 PF13817 IS66 C-terminal element NHY65_10730 PF13005 zinc-finger binding domain of transposase IS66 NHY65_10730 PF13007 Transposase C of IS166 homeodomain NHY65_10730 PF03050 Transposase IS66 family NHY65_10735 PF13610 DDE domain NHY65_10750 PF00375 Sodium:dicarboxylate symporter family NHY65_10760 PF00753 Metallo-beta-lactamase superfamily NHY65_10760 PF16123 Hydroxyacylglutathione hydrolase C-terminus NHY65_10765 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_10770 PF09383 NIL domain NHY65_10770 PF00005 ABC transporter NHY65_10775 PF03180 NLPA lipoprotein NHY65_10785 PF02142 MGS-like domain NHY65_10785 PF01808 AICARFT/IMPCHase bienzyme NHY65_10790 PF02954 Bacterial regulatory protein, Fis family NHY65_10840 PF00842 Alanine racemase, C-terminal domain NHY65_10840 PF01168 Alanine racemase, N-terminal domain NHY65_10845 PF00772 DnaB-like helicase N terminal domain NHY65_10845 PF03796 DnaB-like helicase C terminal domain NHY65_10850 PF03948 Ribosomal protein L9, C-terminal domain NHY65_10850 PF01281 Ribosomal protein L9, N-terminal domain NHY65_10855 PF01084 Ribosomal protein S18 NHY65_10860 PF01250 Ribosomal protein S6 NHY65_10865 PF01040 UbiA prenyltransferase family NHY65_10870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NHY65_10875 PF00510 Cytochrome c oxidase subunit III NHY65_10880 PF00115 Cytochrome C and Quinol oxidase polypeptide I NHY65_10885 PF06481 COX Aromatic Rich Motif NHY65_10885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NHY65_10900 PF03618 Kinase/pyrophosphorylase NHY65_10915 PF00535 Glycosyl transferase family 2 NHY65_10920 PF13994 PgaD-like protein NHY65_10930 PF00296 Luciferase-like monooxygenase NHY65_10955 PF03462 PCRF domain NHY65_10955 PF00472 RF-1 domain NHY65_10960 PF13847 Methyltransferase domain NHY65_10960 PF17827 PrmC N-terminal domain NHY65_10970 PF09084 NMT1/THI5 like NHY65_10975 PF12833 Helix-turn-helix domain NHY65_10980 PF00106 short chain dehydrogenase NHY65_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_10985 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_10990 PF13193 AMP-binding enzyme C-terminal domain NHY65_10990 PF00501 AMP-binding enzyme NHY65_10995 PF01613 Flavin reductase like domain NHY65_11000 PF00899 ThiF family NHY65_11005 PF03109 ABC1 family NHY65_11030 PF02669 K+-transporting ATPase, c chain NHY65_11035 PF02702 Osmosensitive K+ channel His kinase sensor domain NHY65_11035 PF00512 His Kinase A (phospho-acceptor) domain NHY65_11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_11035 PF13493 Domain of unknown function (DUF4118) NHY65_11040 PF00486 Transcriptional regulatory protein, C terminal NHY65_11040 PF00072 Response regulator receiver domain NHY65_11045 PF00120 Glutamine synthetase, catalytic domain NHY65_11060 PF07690 Major Facilitator Superfamily NHY65_11065 PF01103 Surface antigen NHY65_11065 PF07244 Surface antigen variable number repeat NHY65_11065 PF17243 POTRA domain TamA domain 1 NHY65_11080 PF11791 Aconitate B N-terminal domain NHY65_11080 PF00330 Aconitase family (aconitate hydratase) NHY65_11080 PF06434 Aconitate hydratase 2 N-terminus NHY65_11090 PF00520 Ion transport protein NHY65_11090 PF00027 Cyclic nucleotide-binding domain NHY65_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_11110 PF03466 LysR substrate binding domain NHY65_11115 PF04284 Protein of unknown function (DUF441) NHY65_11125 PF01479 S4 domain NHY65_11125 PF00849 RNA pseudouridylate synthase NHY65_11140 PF01479 S4 domain NHY65_11140 PF00849 RNA pseudouridylate synthase NHY65_11145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NHY65_11150 PF01119 DNA mismatch repair protein, C-terminal domain NHY65_11150 PF08676 MutL C terminal dimerisation domain NHY65_11160 PF17209 Hfq protein NHY65_11170 PF00881 Nitroreductase family NHY65_11185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY65_11190 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY65_11190 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NHY65_11195 PF02540 NAD synthase NHY65_11195 PF00958 GMP synthase C terminal domain NHY65_11195 PF00117 Glutamine amidotransferase class-I NHY65_11200 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NHY65_11205 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NHY65_11210 PF13520 Amino acid permease NHY65_11215 PF00171 Aldehyde dehydrogenase family NHY65_11230 PF00465 Iron-containing alcohol dehydrogenase NHY65_11265 PF11940 Domain of unknown function (DUF3458) Ig-like fold NHY65_11265 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NHY65_11265 PF01433 Peptidase family M1 domain NHY65_11275 PF00106 short chain dehydrogenase NHY65_11285 PF01817 Chorismate mutase type II NHY65_11305 PF00440 Bacterial regulatory proteins, tetR family NHY65_11310 PF00593 TonB dependent receptor NHY65_11310 PF07715 TonB-dependent Receptor Plug Domain NHY65_11350 PF00593 TonB dependent receptor NHY65_11350 PF07715 TonB-dependent Receptor Plug Domain NHY65_11370 PF12848 ABC transporter NHY65_11370 PF00005 ABC transporter NHY65_11375 PF00582 Universal stress protein family NHY65_11400 PF00689 Cation transporting ATPase, C-terminus NHY65_11400 PF00690 Cation transporter/ATPase, N-terminus NHY65_11410 PF03594 Benzoate membrane transport protein NHY65_11415 PF01037 Lrp/AsnC ligand binding domain NHY65_11420 PF01810 LysE type translocator NHY65_11425 PF00923 Transaldolase/Fructose-6-phosphate aldolase NHY65_11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_11430 PF03466 LysR substrate binding domain NHY65_11440 PF02803 Thiolase, C-terminal domain NHY65_11440 PF00108 Thiolase, N-terminal domain NHY65_11455 PF00144 Beta-lactamase NHY65_11465 PF07690 Major Facilitator Superfamily NHY65_11470 PF12169 DNA polymerase III subunits gamma and tau domain III NHY65_11470 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NHY65_11470 PF12170 DNA polymerase III tau subunit V interacting with alpha NHY65_11475 PF05506 Domain of unknown function (DUF756) NHY65_11475 PF04185 Phosphoesterase family NHY65_11480 PF03061 Thioesterase superfamily NHY65_11485 PF00465 Iron-containing alcohol dehydrogenase NHY65_11495 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY65_11500 PF01565 FAD binding domain NHY65_11500 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NHY65_11515 PF01645 Conserved region in glutamate synthase NHY65_11535 PF12832 MFS_1 like family NHY65_11550 PF00364 Biotin-requiring enzyme NHY65_11555 PF01220 Dehydroquinase class II NHY65_11570 PF00005 ABC transporter NHY65_11575 PF00486 Transcriptional regulatory protein, C terminal NHY65_11575 PF00072 Response regulator receiver domain NHY65_11595 PF04324 BFD-like [2Fe-2S] binding domain NHY65_11595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY65_11595 PF00384 Molybdopterin oxidoreductase NHY65_11595 PF01568 Molydopterin dinucleotide binding domain NHY65_11600 PF12804 MobA-like NTP transferase domain NHY65_11605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY65_11605 PF01568 Molydopterin dinucleotide binding domain NHY65_11605 PF00384 Molybdopterin oxidoreductase NHY65_11610 PF06463 Molybdenum Cofactor Synthesis C NHY65_11610 PF04055 Radical SAM superfamily NHY65_11620 PF02391 MoaE protein NHY65_11625 PF01967 MoaC family NHY65_11625 PF00994 Probable molybdopterin binding domain NHY65_11640 PF00155 Aminotransferase class I and II NHY65_11640 PF00392 Bacterial regulatory proteins, gntR family NHY65_11645 PF00892 EamA-like transporter family NHY65_11665 PF02635 DsrE/DsrF-like family NHY65_11670 PF16363 GDP-mannose 4,6 dehydratase NHY65_11675 PF10415 Fumarase C C-terminus NHY65_11675 PF00206 Lyase NHY65_11695 PF01266 FAD dependent oxidoreductase NHY65_11705 PF02542 YgbB family NHY65_11715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NHY65_11715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NHY65_11720 PF00440 Bacterial regulatory proteins, tetR family NHY65_11725 PF00072 Response regulator receiver domain NHY65_11725 PF02954 Bacterial regulatory protein, Fis family NHY65_11725 PF00158 Sigma-54 interaction domain NHY65_11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY65_11730 PF00989 PAS fold NHY65_11730 PF00512 His Kinase A (phospho-acceptor) domain NHY65_11735 PF18693 TRAM domain NHY65_11735 PF00919 Uncharacterized protein family UPF0004 NHY65_11735 PF04055 Radical SAM superfamily NHY65_11740 PF00696 Amino acid kinase family NHY65_11745 PF01765 Ribosome recycling factor NHY65_11760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NHY65_11760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NHY65_11760 PF13288 DXP reductoisomerase C-terminal domain NHY65_11765 PF13180 PDZ domain NHY65_11765 PF02163 Peptidase family M50 NHY65_11765 PF17820 PDZ domain NHY65_11770 PF07244 Surface antigen variable number repeat NHY65_11770 PF01103 Surface antigen NHY65_11785 PF07977 FabA-like domain NHY65_11790 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NHY65_11790 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_11805 PF02631 RecX family NHY65_11810 PF00154 recA bacterial DNA recombination protein NHY65_11815 PF01479 S4 domain NHY65_11820 PF13419 Haloacid dehalogenase-like hydrolase NHY65_11845 PF01037 Lrp/AsnC ligand binding domain NHY65_11850 PF00266 Aminotransferase class-V NHY65_11855 PF00324 Amino acid permease NHY65_11875 PF01740 STAS domain NHY65_11875 PF00916 Sulfate permease family NHY65_11880 PF02586 SOS response associated peptidase (SRAP) NHY65_11885 PF07995 Glucose / Sorbosone dehydrogenase NHY65_11895 PF00563 EAL domain NHY65_11895 PF03707 Bacterial signalling protein N terminal repeat NHY65_11895 PF00990 Diguanylate cyclase, GGDEF domain NHY65_11930 PF05524 PEP-utilising enzyme, N-terminal NHY65_11930 PF00391 PEP-utilising enzyme, mobile domain NHY65_11930 PF02896 PEP-utilising enzyme, TIM barrel domain NHY65_11930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NHY65_11930 PF00381 PTS HPr component phosphorylation site NHY65_11960 PF05525 Branched-chain amino acid transport protein NHY65_11965 PF00557 Metallopeptidase family M24 NHY65_11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_11970 PF03466 LysR substrate binding domain NHY65_11980 PF00462 Glutaredoxin NHY65_11985 PF00202 Aminotransferase class-III NHY65_11990 PF00571 CBS domain NHY65_11990 PF00478 IMP dehydrogenase / GMP reductase domain NHY65_12015 PF02881 SRP54-type protein, helical bundle domain NHY65_12015 PF00448 SRP54-type protein, GTPase domain NHY65_12025 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NHY65_12040 PF08173 Membrane bound YbgT-like protein NHY65_12045 PF02322 Cytochrome bd terminal oxidase subunit II NHY65_12050 PF01654 Cytochrome bd terminal oxidase subunit I NHY65_12060 PF07290 Protein of unknown function (DUF1449) NHY65_12075 PF07715 TonB-dependent Receptor Plug Domain NHY65_12075 PF00593 TonB dependent receptor NHY65_12080 PF08367 Peptidase M16C associated NHY65_12080 PF00675 Insulinase (Peptidase family M16) NHY65_12080 PF05193 Peptidase M16 inactive domain NHY65_12090 PF02386 Cation transport protein NHY65_12095 PF02254 TrkA-N domain NHY65_12095 PF02080 TrkA-C domain NHY65_12100 PF00585 C-terminal regulatory domain of Threonine dehydratase NHY65_12100 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_12105 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NHY65_12120 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY65_12120 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY65_12130 PF02617 ATP-dependent Clp protease adaptor protein ClpS NHY65_12135 PF10431 C-terminal, D2-small domain, of ClpB protein NHY65_12135 PF07724 AAA domain (Cdc48 subfamily) NHY65_12135 PF17871 AAA lid domain NHY65_12135 PF02861 Clp amino terminal domain, pathogenicity island component NHY65_12135 PF00004 ATPase family associated with various cellular activities (AAA) NHY65_12140 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NHY65_12145 PF00793 DAHP synthetase I family NHY65_12160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY65_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_12195 PF06418 CTP synthase N-terminus NHY65_12195 PF00117 Glutamine amidotransferase class-I NHY65_12200 PF00793 DAHP synthetase I family NHY65_12205 PF00113 Enolase, C-terminal TIM barrel domain NHY65_12205 PF03952 Enolase, N-terminal domain NHY65_12210 PF04239 Protein of unknown function (DUF421) NHY65_12215 PF04977 Septum formation initiator NHY65_12220 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NHY65_12225 PF01144 Coenzyme A transferase NHY65_12230 PF01144 Coenzyme A transferase NHY65_12235 PF02803 Thiolase, C-terminal domain NHY65_12235 PF00108 Thiolase, N-terminal domain NHY65_12240 PF10397 Adenylosuccinate lyase C-terminus NHY65_12240 PF00206 Lyase NHY65_12245 PF00561 alpha/beta hydrolase fold NHY65_12255 PF02627 Carboxymuconolactone decarboxylase family NHY65_12265 PF00775 Dioxygenase NHY65_12270 PF01487 Type I 3-dehydroquinase NHY65_12275 PF05048 Periplasmic copper-binding protein (NosD) NHY65_12285 PF01011 PQQ enzyme repeat NHY65_12285 PF13360 PQQ-like domain NHY65_12295 PF04143 Sulphur transport NHY65_12305 PF00753 Metallo-beta-lactamase superfamily NHY65_12310 PF01614 Bacterial transcriptional regulator NHY65_12310 PF09339 IclR helix-turn-helix domain NHY65_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_12315 PF03466 LysR substrate binding domain NHY65_12320 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_12320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_12320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_12335 PF00106 short chain dehydrogenase NHY65_12345 PF07690 Major Facilitator Superfamily NHY65_12355 PF01425 Amidase NHY65_12360 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY65_12390 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY65_12390 PF00175 Oxidoreductase NAD-binding domain NHY65_12395 PF01613 Flavin reductase like domain NHY65_12400 PF02311 AraC-like ligand binding domain NHY65_12400 PF12833 Helix-turn-helix domain NHY65_12405 PF01179 Copper amine oxidase, enzyme domain NHY65_12405 PF07833 Copper amine oxidase N-terminal domain NHY65_12405 PF02727 Copper amine oxidase, N2 domain NHY65_12405 PF02728 Copper amine oxidase, N3 domain NHY65_12415 PF00171 Aldehyde dehydrogenase family NHY65_12420 PF01804 Penicillin amidase NHY65_12425 PF12146 Serine aminopeptidase, S33 NHY65_12430 PF02803 Thiolase, C-terminal domain NHY65_12430 PF00108 Thiolase, N-terminal domain NHY65_12435 PF01144 Coenzyme A transferase NHY65_12440 PF01144 Coenzyme A transferase NHY65_12445 PF00775 Dioxygenase NHY65_12445 PF04444 Catechol dioxygenase N terminus NHY65_12450 PF02426 Muconolactone delta-isomerase NHY65_12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_12460 PF03466 LysR substrate binding domain NHY65_12470 PF00392 Bacterial regulatory proteins, gntR family NHY65_12470 PF07729 FCD domain NHY65_12480 PF07690 Major Facilitator Superfamily NHY65_12490 PF00171 Aldehyde dehydrogenase family NHY65_12510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_12510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_12510 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_12520 PF02954 Bacterial regulatory protein, Fis family NHY65_12520 PF00158 Sigma-54 interaction domain NHY65_12520 PF06506 Propionate catabolism activator NHY65_12525 PF13193 AMP-binding enzyme C-terminal domain NHY65_12525 PF00501 AMP-binding enzyme NHY65_12530 PF04341 Protein of unknown function, DUF485 NHY65_12535 PF00474 Sodium:solute symporter family NHY65_12540 PF00107 Zinc-binding dehydrogenase NHY65_12540 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_12545 PF00171 Aldehyde dehydrogenase family NHY65_12555 PF00561 alpha/beta hydrolase fold NHY65_12575 PF07859 alpha/beta hydrolase fold NHY65_12580 PF01047 MarR family NHY65_12585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY65_12585 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_12590 PF00106 short chain dehydrogenase NHY65_12595 PF01872 RibD C-terminal domain NHY65_12600 PF00376 MerR family regulatory protein NHY65_12600 PF09278 MerR, DNA binding NHY65_12620 PF12706 Beta-lactamase superfamily domain NHY65_12625 PF08359 YsiA-like protein, C-terminal region NHY65_12625 PF00440 Bacterial regulatory proteins, tetR family NHY65_12635 PF00857 Isochorismatase family NHY65_12640 PF03466 LysR substrate binding domain NHY65_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_12645 PF07995 Glucose / Sorbosone dehydrogenase NHY65_12650 PF00999 Sodium/hydrogen exchanger family NHY65_12650 PF02254 TrkA-N domain NHY65_12675 PF13018 Extended Signal Peptide of Type V secretion system NHY65_12675 PF13332 Hemagglutinin repeat NHY65_12675 PF05860 haemagglutination activity domain NHY65_12675 PF04829 Pre-toxin domain with VENN motif NHY65_12690 PF07690 Major Facilitator Superfamily NHY65_12695 PF04909 Amidohydrolase NHY65_12705 PF00392 Bacterial regulatory proteins, gntR family NHY65_12705 PF07702 UTRA domain NHY65_12710 PF08450 SMP-30/Gluconolactonase/LRE-like region NHY65_12720 PF03466 LysR substrate binding domain NHY65_12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_12740 PF07690 Major Facilitator Superfamily NHY65_12745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY65_12745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY65_12745 PF01842 ACT domain NHY65_12750 PF03737 Aldolase/RraA NHY65_12790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY65_12790 PF00529 HlyD membrane-fusion protein of T1SS NHY65_12805 PF00171 Aldehyde dehydrogenase family NHY65_12810 PF00920 Dehydratase family NHY65_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_12820 PF03466 LysR substrate binding domain NHY65_12825 PF01370 NAD dependent epimerase/dehydratase family NHY65_12855 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_12855 PF00107 Zinc-binding dehydrogenase NHY65_12865 PF01032 FecCD transport family NHY65_12870 PF00005 ABC transporter NHY65_12890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY65_12890 PF14572 Phosphoribosyl synthetase-associated domain NHY65_12895 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY65_12975 PF00196 Bacterial regulatory proteins, luxR family NHY65_12980 PF01425 Amidase NHY65_12990 PF07690 Major Facilitator Superfamily NHY65_13015 PF01975 Survival protein SurE NHY65_13025 PF04607 Region found in RelA / SpoT proteins NHY65_13025 PF02824 TGS domain NHY65_13025 PF13291 ACT domain NHY65_13075 PF12146 Serine aminopeptidase, S33 NHY65_13080 PF02311 AraC-like ligand binding domain NHY65_13080 PF12833 Helix-turn-helix domain NHY65_13095 PF00072 Response regulator receiver domain NHY65_13095 PF00486 Transcriptional regulatory protein, C terminal NHY65_13100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY65_13100 PF00529 HlyD membrane-fusion protein of T1SS NHY65_13105 PF00873 AcrB/AcrD/AcrF family NHY65_13110 PF02321 Outer membrane efflux protein NHY65_13115 PF12146 Serine aminopeptidase, S33 NHY65_13125 PF01593 Flavin containing amine oxidoreductase NHY65_13140 PF01266 FAD dependent oxidoreductase NHY65_13165 PF16970 Type-1 fimbrial protein, A NHY65_13175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY65_13175 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY65_13180 PF13954 PapC N-terminal domain NHY65_13180 PF13953 PapC C-terminal domain NHY65_13180 PF00577 Outer membrane usher protein NHY65_13185 PF00419 Fimbrial protein NHY65_13195 PF00107 Zinc-binding dehydrogenase NHY65_13195 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_13205 PF00199 Catalase NHY65_13220 PF13091 PLD-like domain NHY65_13235 PF01244 Membrane dipeptidase (Peptidase family M19) NHY65_13245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NHY65_13250 PF03070 TENA/THI-4/PQQC family NHY65_13255 PF12706 Beta-lactamase superfamily domain NHY65_13260 PF08042 PqqA family NHY65_13270 PF00149 Calcineurin-like phosphoesterase NHY65_13280 PF00550 Phosphopantetheine attachment site NHY65_13280 PF00857 Isochorismatase family NHY65_13285 PF00106 short chain dehydrogenase NHY65_13290 PF00005 ABC transporter NHY65_13290 PF03459 TOBE domain NHY65_13295 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_13305 PF03459 TOBE domain NHY65_13315 PF00866 Ring hydroxylating beta subunit NHY65_13335 PF01613 Flavin reductase like domain NHY65_13350 PF01738 Dienelactone hydrolase family NHY65_13355 PF07690 Major Facilitator Superfamily NHY65_13360 PF12833 Helix-turn-helix domain NHY65_13360 PF06719 AraC-type transcriptional regulator N-terminus NHY65_13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_13385 PF03466 LysR substrate binding domain NHY65_13390 PF01144 Coenzyme A transferase NHY65_13395 PF01144 Coenzyme A transferase NHY65_13405 PF00108 Thiolase, N-terminal domain NHY65_13405 PF02803 Thiolase, C-terminal domain NHY65_13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_13415 PF03466 LysR substrate binding domain NHY65_13435 PF07715 TonB-dependent Receptor Plug Domain NHY65_13435 PF00593 TonB dependent receptor NHY65_13440 PF00083 Sugar (and other) transporter NHY65_13455 PF00005 ABC transporter NHY65_13460 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_13465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY65_13480 PF00392 Bacterial regulatory proteins, gntR family NHY65_13480 PF07702 UTRA domain NHY65_13490 PF02525 Flavodoxin-like fold NHY65_13495 PF01638 HxlR-like helix-turn-helix NHY65_13515 PF01925 Sulfite exporter TauE/SafE NHY65_13530 PF00753 Metallo-beta-lactamase superfamily NHY65_13530 PF04273 Putative phosphatase (DUF442) NHY65_13535 PF02954 Bacterial regulatory protein, Fis family NHY65_13535 PF00072 Response regulator receiver domain NHY65_13535 PF00158 Sigma-54 interaction domain NHY65_13540 PF01062 Bestrophin, RFP-TM, chloride channel NHY65_13545 PF00107 Zinc-binding dehydrogenase NHY65_13545 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_13550 PF00106 short chain dehydrogenase NHY65_13560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY65_13560 PF00364 Biotin-requiring enzyme NHY65_13560 PF02817 e3 binding domain NHY65_13570 PF00676 Dehydrogenase E1 component NHY65_13575 PF04055 Radical SAM superfamily NHY65_13590 PF00990 Diguanylate cyclase, GGDEF domain NHY65_13590 PF08448 PAS fold NHY65_13600 PF05175 Methyltransferase small domain NHY65_13605 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_13615 PF17862 AAA+ lid domain NHY65_13615 PF01434 Peptidase family M41 NHY65_13615 PF00004 ATPase family associated with various cellular activities (AAA) NHY65_13625 PF05166 YcgL domain NHY65_13650 PF02132 RecR protein NHY65_13650 PF13662 Toprim domain NHY65_13655 PF02575 YbaB/EbfC DNA-binding family NHY65_13675 PF00561 alpha/beta hydrolase fold NHY65_13760 PF02684 Lipid-A-disaccharide synthetase NHY65_13785 PF01925 Sulfite exporter TauE/SafE NHY65_13790 PF00793 DAHP synthetase I family NHY65_13795 PF02654 Cobalamin-5-phosphate synthase NHY65_13810 PF02277 Phosphoribosyltransferase NHY65_13815 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NHY65_13825 PF13419 Haloacid dehalogenase-like hydrolase NHY65_13850 PF07715 TonB-dependent Receptor Plug Domain NHY65_13850 PF00593 TonB dependent receptor NHY65_13870 PF06276 Ferric iron reductase FhuF-like transporter NHY65_13870 PF04183 IucA / IucC family NHY65_13875 PF07690 Major Facilitator Superfamily NHY65_13880 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY65_13885 PF06276 Ferric iron reductase FhuF-like transporter NHY65_13885 PF04183 IucA / IucC family NHY65_13890 PF04073 Aminoacyl-tRNA editing domain NHY65_13900 PF03109 ABC1 family NHY65_13905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_13905 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_13905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_13910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_13910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_13910 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_13920 PF12852 Cupin NHY65_13920 PF12833 Helix-turn-helix domain NHY65_13925 PF00639 PPIC-type PPIASE domain NHY65_13925 PF09312 SurA N-terminal domain NHY65_13930 PF00216 Bacterial DNA-binding protein NHY65_13950 PF00266 Aminotransferase class-V NHY65_13955 PF01592 NifU-like N terminal domain NHY65_13965 PF07743 HSCB C-terminal oligomerisation domain NHY65_13965 PF00226 DnaJ domain NHY65_13970 PF00012 Hsp70 protein NHY65_13980 PF00211 Adenylate and Guanylate cyclase catalytic domain NHY65_13990 PF02559 CarD-like/TRCF domain NHY65_13990 PF00270 DEAD/DEAH box helicase NHY65_13990 PF00271 Helicase conserved C-terminal domain NHY65_13990 PF03461 TRCF domain NHY65_13990 PF17757 UvrB interaction domain NHY65_14010 PF03737 Aldolase/RraA NHY65_14015 PF13460 NAD(P)H-binding NHY65_14020 PF01649 Ribosomal protein S20 NHY65_14030 PF00459 Inositol monophosphatase family NHY65_14045 PF00005 ABC transporter NHY65_14045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY65_14050 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_14055 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_14060 PF01432 Peptidase family M3 NHY65_14090 PF01618 MotA/TolQ/ExbB proton channel family NHY65_14095 PF02472 Biopolymer transport protein ExbD/TolR NHY65_14110 PF01274 Malate synthase NHY65_14115 PF03969 AFG1-like ATPase NHY65_14125 PF00743 Flavin-binding monooxygenase-like NHY65_14135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NHY65_14145 PF00216 Bacterial DNA-binding protein NHY65_14150 PF00575 S1 RNA binding domain NHY65_14155 PF02224 Cytidylate kinase NHY65_14175 PF03167 Uracil DNA glycosylase superfamily NHY65_14185 PF03934 Type II secretion system (T2SS), protein K NHY65_14190 PF07963 Prokaryotic N-terminal methylation motif NHY65_14190 PF11612 Type II secretion system (T2SS), protein J NHY65_14195 PF07963 Prokaryotic N-terminal methylation motif NHY65_14195 PF02501 Type II secretion system (T2SS), protein I NHY65_14210 PF01026 TatD related DNase NHY65_14220 PF09115 DNA polymerase III, delta subunit, C terminal NHY65_14225 PF02348 Cytidylyltransferase NHY65_14230 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NHY65_14235 PF00664 ABC transporter transmembrane region NHY65_14235 PF00005 ABC transporter NHY65_14250 PF02195 ParB-like nuclease domain NHY65_14250 PF17762 HTH domain found in ParB protein NHY65_14255 PF13614 AAA domain NHY65_14270 PF01636 Phosphotransferase enzyme family NHY65_14280 PF00639 PPIC-type PPIASE domain NHY65_14280 PF09312 SurA N-terminal domain NHY65_14285 PF01116 Fructose-bisphosphate aldolase class-II NHY65_14295 PF00162 Phosphoglycerate kinase NHY65_14310 PF08007 Cupin superfamily protein NHY65_14325 PF00375 Sodium:dicarboxylate symporter family NHY65_14330 PF06912 Protein of unknown function (DUF1275) NHY65_14335 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NHY65_14340 PF00664 ABC transporter transmembrane region NHY65_14340 PF00005 ABC transporter NHY65_14355 PF01597 Glycine cleavage H-protein NHY65_14360 PF02146 Sir2 family NHY65_14365 PF00474 Sodium:solute symporter family NHY65_14375 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NHY65_14375 PF00171 Aldehyde dehydrogenase family NHY65_14375 PF14850 DNA-binding domain of Proline dehydrogenase NHY65_14375 PF01619 Proline dehydrogenase NHY65_14380 PF04229 GrpB protein NHY65_14385 PF05958 tRNA (Uracil-5-)-methyltransferase NHY65_14395 PF09992 Phosphodiester glycosidase NHY65_14405 PF04264 YceI-like domain NHY65_14420 PF02773 S-adenosylmethionine synthetase, C-terminal domain NHY65_14420 PF02772 S-adenosylmethionine synthetase, central domain NHY65_14420 PF00438 S-adenosylmethionine synthetase, N-terminal domain NHY65_14440 PF00905 Penicillin binding protein transpeptidase domain NHY65_14460 PF03853 YjeF-related protein N-terminus NHY65_14460 PF01256 Carbohydrate kinase NHY65_14465 PF08331 Domain of unknown function (DUF1730) NHY65_14470 PF04055 Radical SAM superfamily NHY65_14470 PF06968 Biotin and Thiamin Synthesis associated domain NHY65_14485 PF16970 Type-1 fimbrial protein, A NHY65_14495 PF00577 Outer membrane usher protein NHY65_14495 PF13953 PapC C-terminal domain NHY65_14495 PF13954 PapC N-terminal domain NHY65_14515 PF00892 EamA-like transporter family NHY65_14535 PF03466 LysR substrate binding domain NHY65_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_14555 PF00440 Bacterial regulatory proteins, tetR family NHY65_14565 PF01709 Transcriptional regulator NHY65_14570 PF01037 Lrp/AsnC ligand binding domain NHY65_14585 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_14590 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_14605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY65_14605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_14615 PF00296 Luciferase-like monooxygenase NHY65_14625 PF03180 NLPA lipoprotein NHY65_14630 PF00005 ABC transporter NHY65_14630 PF09383 NIL domain NHY65_14635 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_14640 PF01926 50S ribosome-binding GTPase NHY65_14640 PF06071 Protein of unknown function (DUF933) NHY65_14670 PF05437 Branched-chain amino acid transport protein (AzlD) NHY65_14680 PF02222 ATP-grasp domain NHY65_14685 PF08335 GlnD PII-uridylyltransferase NHY65_14685 PF01966 HD domain NHY65_14685 PF01909 Nucleotidyltransferase domain NHY65_14700 PF12833 Helix-turn-helix domain NHY65_14700 PF12852 Cupin NHY65_14705 PF00255 Glutathione peroxidase NHY65_14710 PF01641 SelR domain NHY65_14715 PF00155 Aminotransferase class I and II NHY65_14720 PF00375 Sodium:dicarboxylate symporter family NHY65_14730 PF07733 Bacterial DNA polymerase III alpha NTPase domain NHY65_14730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NHY65_14730 PF14579 Helix-hairpin-helix motif NHY65_14730 PF02811 PHP domain NHY65_14730 PF01336 OB-fold nucleic acid binding domain NHY65_14735 PF00588 SpoU rRNA Methylase family NHY65_14740 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_14755 PF13192 Thioredoxin domain NHY65_14770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_14770 PF03466 LysR substrate binding domain NHY65_14775 PF01758 Sodium Bile acid symporter family NHY65_14780 PF01022 Bacterial regulatory protein, arsR family NHY65_14785 PF03960 ArsC family NHY65_14795 PF13382 Adenine deaminase C-terminal domain NHY65_14795 PF01979 Amidohydrolase family NHY65_14805 PF03466 LysR substrate binding domain NHY65_14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_14815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY65_14820 PF01177 Asp/Glu/Hydantoin racemase NHY65_14835 PF00005 ABC transporter NHY65_14840 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY65_14855 PF00296 Luciferase-like monooxygenase NHY65_14860 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_14860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY65_14860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_14870 PF01654 Cytochrome bd terminal oxidase subunit I NHY65_14875 PF02322 Cytochrome bd terminal oxidase subunit II NHY65_14890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_14890 PF03466 LysR substrate binding domain NHY65_14905 PF00698 Acyl transferase domain NHY65_14910 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NHY65_14920 PF01039 Carboxyl transferase domain NHY65_14925 PF06857 Malonate decarboxylase delta subunit (MdcD) NHY65_14935 PF16957 Malonate decarboxylase, alpha subunit, transporter NHY65_14940 PF07690 Major Facilitator Superfamily NHY65_14955 PF00155 Aminotransferase class I and II NHY65_14955 PF00392 Bacterial regulatory proteins, gntR family NHY65_14960 PF04172 LrgB-like family NHY65_14965 PF03788 LrgA family NHY65_14970 PF03466 LysR substrate binding domain NHY65_14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_14975 PF02798 Glutathione S-transferase, N-terminal domain NHY65_14975 PF14834 Glutathione S-transferase, C-terminal domain NHY65_14980 PF02798 Glutathione S-transferase, N-terminal domain NHY65_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_14985 PF03466 LysR substrate binding domain NHY65_14995 PF00581 Rhodanese-like domain NHY65_15000 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_15020 PF01810 LysE type translocator NHY65_15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_15025 PF03466 LysR substrate binding domain NHY65_15045 PF00005 ABC transporter NHY65_15050 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_15055 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_15080 PF00872 Transposase, Mutator family NHY65_15095 PF01037 Lrp/AsnC ligand binding domain NHY65_15095 PF13404 AsnC-type helix-turn-helix domain NHY65_15105 PF00717 Peptidase S24-like NHY65_15140 PF00994 Probable molybdopterin binding domain NHY65_15140 PF18146 Damage-inducible protein CinA KH domain NHY65_15140 PF02464 Competence-damaged protein NHY65_15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_15175 PF03466 LysR substrate binding domain NHY65_15200 PF00440 Bacterial regulatory proteins, tetR family NHY65_15205 PF02770 Acyl-CoA dehydrogenase, middle domain NHY65_15205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY65_15205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY65_15210 PF01039 Carboxyl transferase domain NHY65_15215 PF00378 Enoyl-CoA hydratase/isomerase NHY65_15220 PF00364 Biotin-requiring enzyme NHY65_15220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY65_15220 PF00289 Biotin carboxylase, N-terminal domain NHY65_15220 PF02785 Biotin carboxylase C-terminal domain NHY65_15220 PF18140 Propionyl-coenzyme A carboxylase BT domain NHY65_15225 PF00682 HMGL-like NHY65_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_15230 PF03466 LysR substrate binding domain NHY65_15255 PF07690 Major Facilitator Superfamily NHY65_15265 PF01144 Coenzyme A transferase NHY65_15275 PF07690 Major Facilitator Superfamily NHY65_15285 PF00378 Enoyl-CoA hydratase/isomerase NHY65_15295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY65_15295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY65_15295 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY65_15300 PF02803 Thiolase, C-terminal domain NHY65_15300 PF00108 Thiolase, N-terminal domain NHY65_15305 PF09339 IclR helix-turn-helix domain NHY65_15310 PF07690 Major Facilitator Superfamily NHY65_15315 PF03060 Nitronate monooxygenase NHY65_15320 PF00378 Enoyl-CoA hydratase/isomerase NHY65_15325 PF09339 IclR helix-turn-helix domain NHY65_15330 PF02515 CoA-transferase family III NHY65_15340 PF07690 Major Facilitator Superfamily NHY65_15345 PF13419 Haloacid dehalogenase-like hydrolase NHY65_15360 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_15365 PF08402 TOBE domain NHY65_15365 PF00005 ABC transporter NHY65_15375 PF07702 UTRA domain NHY65_15375 PF00392 Bacterial regulatory proteins, gntR family NHY65_15380 PF01494 FAD binding domain NHY65_15385 PF01614 Bacterial transcriptional regulator NHY65_15385 PF09339 IclR helix-turn-helix domain NHY65_15390 PF02525 Flavodoxin-like fold NHY65_15395 PF03466 LysR substrate binding domain NHY65_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_15400 PF02627 Carboxymuconolactone decarboxylase family NHY65_15415 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY65_15430 PF00296 Luciferase-like monooxygenase NHY65_15435 PF01613 Flavin reductase like domain NHY65_15440 PF12697 Alpha/beta hydrolase family NHY65_15460 PF01292 Prokaryotic cytochrome b561 NHY65_15465 PF00199 Catalase NHY65_15500 PF03061 Thioesterase superfamily NHY65_15505 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_15510 PF07848 PaaX-like protein NHY65_15510 PF08223 PaaX-like protein C-terminal domain NHY65_15515 PF14535 AMP-binding enzyme C-terminal domain NHY65_15515 PF00501 AMP-binding enzyme NHY65_15520 PF02803 Thiolase, C-terminal domain NHY65_15520 PF00108 Thiolase, N-terminal domain NHY65_15525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY65_15525 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY65_15525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY65_15530 PF00378 Enoyl-CoA hydratase/isomerase NHY65_15540 PF00970 Oxidoreductase FAD-binding domain NHY65_15540 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY65_15540 PF00175 Oxidoreductase NAD-binding domain NHY65_15545 PF01883 Iron-sulfur cluster assembly protein NHY65_15550 PF05138 Phenylacetic acid catabolic protein NHY65_15555 PF06243 Phenylacetic acid degradation B NHY65_15560 PF05138 Phenylacetic acid catabolic protein NHY65_15570 PF03313 Serine dehydratase alpha chain NHY65_15570 PF03315 Serine dehydratase beta chain NHY65_15575 PF13520 Amino acid permease NHY65_15580 PF00171 Aldehyde dehydrogenase family NHY65_15585 PF00083 Sugar (and other) transporter NHY65_15610 PF05544 Proline racemase NHY65_15615 PF00392 Bacterial regulatory proteins, gntR family NHY65_15625 PF00701 Dihydrodipicolinate synthetase family NHY65_15635 PF09278 MerR, DNA binding NHY65_15635 PF00376 MerR family regulatory protein NHY65_15650 PF02677 Epoxyqueuosine reductase QueH NHY65_15665 PF07690 Major Facilitator Superfamily NHY65_15670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY65_15680 PF03466 LysR substrate binding domain NHY65_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_15700 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NHY65_15710 PF00004 ATPase family associated with various cellular activities (AAA) NHY65_15710 PF17871 AAA lid domain NHY65_15710 PF10431 C-terminal, D2-small domain, of ClpB protein NHY65_15710 PF07724 AAA domain (Cdc48 subfamily) NHY65_15725 PF00691 OmpA family NHY65_15725 PF01389 OmpA-like transmembrane domain NHY65_15750 PF05947 Type VI secretion system, TssF NHY65_15765 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NHY65_15790 PF00005 ABC transporter NHY65_15795 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY65_15800 PF01425 Amidase NHY65_15805 PF08753 NikR C terminal nickel binding domain NHY65_15805 PF01402 Ribbon-helix-helix protein, copG family NHY65_15825 PF02525 Flavodoxin-like fold NHY65_15830 PF02785 Biotin carboxylase C-terminal domain NHY65_15830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY65_15830 PF00289 Biotin carboxylase, N-terminal domain NHY65_15845 PF08240 Alcohol dehydrogenase GroES-like domain NHY65_15845 PF13823 Alcohol dehydrogenase GroES-associated NHY65_15845 PF00107 Zinc-binding dehydrogenase NHY65_15855 PF00440 Bacterial regulatory proteins, tetR family NHY65_15875 PF00654 Voltage gated chloride channel NHY65_15890 PF07286 Protein of unknown function (DUF1445) NHY65_15895 PF03746 LamB/YcsF family NHY65_15900 PF01566 Natural resistance-associated macrophage protein NHY65_15905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_15905 PF03466 LysR substrate binding domain NHY65_15925 PF13296 Putative type VI secretion system Rhs element Vgr NHY65_15925 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY65_15925 PF04717 Type VI secretion system, phage-baseplate injector NHY65_15935 PF13419 Haloacid dehalogenase-like hydrolase NHY65_15955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY65_15955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY65_15975 PF07690 Major Facilitator Superfamily NHY65_15990 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY65_16000 PF00892 EamA-like transporter family NHY65_16005 PF01037 Lrp/AsnC ligand binding domain NHY65_16010 PF01624 MutS domain I NHY65_16010 PF05188 MutS domain II NHY65_16010 PF05192 MutS domain III NHY65_16010 PF05190 MutS family domain IV NHY65_16010 PF00488 MutS domain V NHY65_16020 PF00037 4Fe-4S binding domain NHY65_16020 PF11953 Domain of unknown function (DUF3470) NHY65_16030 PF01596 O-methyltransferase NHY65_16040 PF00132 Bacterial transferase hexapeptide (six repeats) NHY65_16045 PF01205 Uncharacterized protein family UPF0029 NHY65_16055 PF00664 ABC transporter transmembrane region NHY65_16055 PF03412 Peptidase C39 family NHY65_16055 PF00005 ABC transporter NHY65_16060 PF02321 Outer membrane efflux protein NHY65_16070 PF00005 ABC transporter NHY65_16070 PF12399 Branched-chain amino acid ATP-binding cassette transporter NHY65_16075 PF03968 OstA-like protein NHY65_16090 PF01380 SIS domain NHY65_16090 PF00571 CBS domain NHY65_16095 PF09190 DALR domain NHY65_16095 PF01406 tRNA synthetases class I (C) catalytic domain NHY65_16120 PF01638 HxlR-like helix-turn-helix NHY65_16125 PF07690 Major Facilitator Superfamily NHY65_16150 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY65_16150 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY65_16160 PF00313 'Cold-shock' DNA-binding domain NHY65_16165 PF01810 LysE type translocator NHY65_16195 PF02601 Exonuclease VII, large subunit NHY65_16195 PF13742 OB-fold nucleic acid binding domain NHY65_16230 PF09278 MerR, DNA binding NHY65_16230 PF00376 MerR family regulatory protein NHY65_16235 PF00403 Heavy-metal-associated domain NHY65_16240 PF00403 Heavy-metal-associated domain NHY65_16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_16245 PF03466 LysR substrate binding domain NHY65_16255 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY65_16255 PF00355 Rieske [2Fe-2S] domain NHY65_16260 PF00866 Ring hydroxylating beta subunit NHY65_16265 PF00970 Oxidoreductase FAD-binding domain NHY65_16265 PF00175 Oxidoreductase NAD-binding domain NHY65_16265 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY65_16270 PF00106 short chain dehydrogenase NHY65_16290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NHY65_16290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NHY65_16300 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY65_16300 PF00578 AhpC/TSA family NHY65_16320 PF13192 Thioredoxin domain NHY65_16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_16330 PF00043 Glutathione S-transferase, C-terminal domain NHY65_16330 PF02798 Glutathione S-transferase, N-terminal domain NHY65_16340 PF02390 Putative methyltransferase NHY65_16345 PF00043 Glutathione S-transferase, C-terminal domain NHY65_16345 PF13417 Glutathione S-transferase, N-terminal domain NHY65_16355 PF00691 OmpA family NHY65_16355 PF13488 Glycine zipper NHY65_16360 PF01979 Amidohydrolase family NHY65_16375 PF01170 Putative RNA methylase family UPF0020 NHY65_16375 PF02926 THUMP domain NHY65_16375 PF10672 S-adenosylmethionine-dependent methyltransferase NHY65_16390 PF00004 ATPase family associated with various cellular activities (AAA) NHY65_16390 PF07724 AAA domain (Cdc48 subfamily) NHY65_16390 PF10431 C-terminal, D2-small domain, of ClpB protein NHY65_16390 PF17871 AAA lid domain NHY65_16390 PF02861 Clp amino terminal domain, pathogenicity island component NHY65_16410 PF02566 OsmC-like protein NHY65_16420 PF13545 Crp-like helix-turn-helix domain NHY65_16420 PF00027 Cyclic nucleotide-binding domain NHY65_16430 PF00248 Aldo/keto reductase family NHY65_16445 PF00709 Adenylosuccinate synthetase NHY65_16455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY65_16455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY65_16460 PF01411 tRNA synthetases class II (A) NHY65_16460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY65_16460 PF02272 DHHA1 domain NHY65_16465 PF00696 Amino acid kinase family NHY65_16465 PF01842 ACT domain NHY65_16465 PF13840 ACT domain NHY65_16470 PF02599 Global regulator protein family NHY65_16475 PF01351 Ribonuclease HII NHY65_16485 PF01292 Prokaryotic cytochrome b561 NHY65_16490 PF00962 Adenosine/AMP deaminase NHY65_16495 PF00860 Permease family NHY65_16505 PF00743 Flavin-binding monooxygenase-like NHY65_16510 PF00106 short chain dehydrogenase NHY65_16520 PF17954 Quercetinase C-terminal cupin domain NHY65_16520 PF02678 Pirin NHY65_16525 PF00440 Bacterial regulatory proteins, tetR family NHY65_16525 PF17932 Tetracyclin repressor-like, C-terminal domain NHY65_16535 PF00106 short chain dehydrogenase NHY65_16545 PF13610 DDE domain NHY65_16565 PF13610 DDE domain NHY65_16570 PF02796 Helix-turn-helix domain of resolvase NHY65_16570 PF00239 Resolvase, N terminal domain NHY65_16580 PF13610 DDE domain NHY65_16600 PF02796 Helix-turn-helix domain of resolvase NHY65_16600 PF00239 Resolvase, N terminal domain NHY65_16615 PF04958 Arginine N-succinyltransferase beta subunit NHY65_16630 PF00171 Aldehyde dehydrogenase family NHY65_16640 PF07729 FCD domain NHY65_16640 PF00392 Bacterial regulatory proteins, gntR family NHY65_16650 PF00324 Amino acid permease NHY65_16660 PF00324 Amino acid permease NHY65_16700 PF05593 RHS Repeat NHY65_16700 PF03527 RHS protein NHY65_16735 PF03180 NLPA lipoprotein NHY65_16740 PF05987 Bacterial protein of unknown function (DUF898) NHY65_16760 PF00764 Arginosuccinate synthase NHY65_16765 PF01590 GAF domain NHY65_16765 PF00360 Phytochrome region NHY65_16765 PF00990 Diguanylate cyclase, GGDEF domain NHY65_16765 PF00563 EAL domain NHY65_16770 PF01979 Amidohydrolase family NHY65_16785 PF07715 TonB-dependent Receptor Plug Domain NHY65_16785 PF00593 TonB dependent receptor NHY65_16790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY65_16790 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_16795 PF00005 ABC transporter NHY65_16795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY65_16800 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_16800 PF12911 N-terminal TM domain of oligopeptide transport permease C NHY65_16805 PF00528 Binding-protein-dependent transport system inner membrane component NHY65_16810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NHY65_16820 PF00929 Exonuclease NHY65_16830 PF00293 NUDIX domain NHY65_16830 PF09297 NADH pyrophosphatase zinc ribbon domain NHY65_16840 PF04972 BON domain NHY65_16845 PF02021 Uncharacterised protein family UPF0102 NHY65_16850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY65_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_16860 PF03466 LysR substrate binding domain NHY65_16865 PF01810 LysE type translocator NHY65_16885 PF01494 FAD binding domain NHY65_16890 PF01494 FAD binding domain NHY65_16980 PF01551 Peptidase family M23 NHY65_16980 PF10145 Phage-related minor tail protein NHY65_16980 PF01464 Transglycosylase SLT domain NHY65_17040 PF04860 Phage portal protein NHY65_17140 PF00772 DnaB-like helicase N terminal domain NHY65_17140 PF03796 DnaB-like helicase C terminal domain NHY65_17145 PF00772 DnaB-like helicase N terminal domain NHY65_17145 PF03796 DnaB-like helicase C terminal domain NHY65_17215 PF08019 Phosphoethanolamine transferase EptA/EptB NHY65_17215 PF00884 Sulfatase NHY65_17260 PF01551 Peptidase family M23 NHY65_17260 PF08525 Opacity-associated protein A N-terminal motif NHY65_17260 PF01476 LysM domain NHY65_17585 PF01812 5-formyltetrahydrofolate cyclo-ligase family NHY65_17590 PF00691 OmpA family NHY65_17590 PF04355 SmpA / OmlA family NHY65_17600 PF00004 ATPase family associated with various cellular activities (AAA) NHY65_17600 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY65_17600 PF02190 ATP-dependent protease La (LON) substrate-binding domain NHY65_17605 PF02590 Predicted SPOUT methyltransferase NHY65_17625 PF04060 Putative Fe-S cluster NHY65_17630 PF00633 Helix-hairpin-helix motif NHY65_17630 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY65_17630 PF10576 Iron-sulfur binding domain of endonuclease III NHY65_17640 PF05191 Adenylate kinase, active site lid NHY65_17670 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY65_17675 PF01730 UreF NHY65_17685 PF00449 Urease alpha-subunit, N-terminal domain NHY65_17685 PF01979 Amidohydrolase family NHY65_17690 PF00699 Urease beta subunit NHY65_17695 PF00547 Urease, gamma subunit NHY65_17715 PF00463 Isocitrate lyase family NHY65_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_17720 PF03466 LysR substrate binding domain NHY65_17730 PF03600 Citrate transporter NHY65_17750 PF01507 Phosphoadenosine phosphosulfate reductase family NHY65_17765 PF01336 OB-fold nucleic acid binding domain NHY65_17765 PF00152 tRNA synthetases class II (D, K and N) NHY65_17780 PF00301 Rubredoxin NHY65_17785 PF18113 Rubredoxin binding C-terminal domain NHY65_17785 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_17795 PF03466 LysR substrate binding domain NHY65_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_17805 PF13090 Polyphosphate kinase C-terminal domain 2 NHY65_17805 PF02503 Polyphosphate kinase middle domain NHY65_17805 PF17941 Polyphosphate kinase C-terminal domain 1 NHY65_17805 PF13089 Polyphosphate kinase N-terminal domain NHY65_17810 PF00912 Transglycosylase NHY65_17815 PF01694 Rhomboid family NHY65_17825 PF00005 ABC transporter NHY65_17835 PF00484 Carbonic anhydrase NHY65_17840 PF00561 alpha/beta hydrolase fold NHY65_17850 PF00593 TonB dependent receptor NHY65_17850 PF07715 TonB-dependent Receptor Plug Domain NHY65_17870 PF03781 Sulfatase-modifying factor enzyme 1 NHY65_17885 PF00291 Pyridoxal-phosphate dependent enzyme NHY65_17890 PF01384 Phosphate transporter family NHY65_17895 PF02310 B12 binding domain NHY65_17895 PF02607 B12 binding domain NHY65_17895 PF02965 Vitamin B12 dependent methionine synthase, activation domain NHY65_17895 PF00809 Pterin binding enzyme NHY65_17895 PF02574 Homocysteine S-methyltransferase NHY65_17900 PF02779 Transketolase, pyrimidine binding domain NHY65_17900 PF02780 Transketolase, C-terminal domain NHY65_17905 PF00456 Transketolase, thiamine diphosphate binding domain NHY65_17910 PF07690 Major Facilitator Superfamily NHY65_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_17920 PF03466 LysR substrate binding domain NHY65_17945 PF04960 Glutaminase NHY65_17950 PF01327 Polypeptide deformylase NHY65_17955 PF07690 Major Facilitator Superfamily NHY65_17965 PF00205 Thiamine pyrophosphate enzyme, central domain NHY65_17965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY65_17965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY65_17975 PF01958 Domain of unknown function DUF108 NHY65_17975 PF03447 Homoserine dehydrogenase, NAD binding domain NHY65_17985 PF12697 Alpha/beta hydrolase family NHY65_17995 PF07690 Major Facilitator Superfamily NHY65_18000 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_18000 PF14759 Reductase C-terminal NHY65_18005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY65_18015 PF00355 Rieske [2Fe-2S] domain NHY65_18025 PF00355 Rieske [2Fe-2S] domain NHY65_18030 PF09339 IclR helix-turn-helix domain NHY65_18030 PF01614 Bacterial transcriptional regulator NHY65_18045 PF00378 Enoyl-CoA hydratase/isomerase NHY65_18055 PF00535 Glycosyl transferase family 2 NHY65_18060 PF14883 Hypothetical glycosyl hydrolase family 13 NHY65_18060 PF01522 Polysaccharide deacetylase NHY65_18065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY65_18070 PF07152 YaeQ protein NHY65_18090 PF03061 Thioesterase superfamily NHY65_18100 PF02028 BCCT, betaine/carnitine/choline family transporter NHY65_18105 PF02028 BCCT, betaine/carnitine/choline family transporter NHY65_18110 PF00440 Bacterial regulatory proteins, tetR family NHY65_18110 PF13977 BetI-type transcriptional repressor, C-terminal NHY65_18115 PF00171 Aldehyde dehydrogenase family NHY65_18125 PF06039 Malate:quinone oxidoreductase (Mqo) NHY65_18135 PF02574 Homocysteine S-methyltransferase NHY65_18140 PF13520 Amino acid permease NHY65_18165 PF01126 Heme oxygenase NHY65_18175 PF04575 Protein of unknown function (DUF560) NHY65_18195 PF04542 Sigma-70 region 2 NHY65_18195 PF08281 Sigma-70, region 4 NHY65_18210 PF00083 Sugar (and other) transporter NHY65_18255 PF00717 Peptidase S24-like NHY65_18260 PF11799 impB/mucB/samB family C-terminal domain NHY65_18260 PF11798 IMS family HHH motif NHY65_18260 PF13438 Domain of unknown function (DUF4113) NHY65_18260 PF00817 impB/mucB/samB family NHY65_18390 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NHY65_18585 PF00872 Transposase, Mutator family NHY65_18620 PF01695 IstB-like ATP binding protein NHY65_18630 PF01555 DNA methylase NHY65_18660 PF01555 DNA methylase NHY65_18665 PF00145 C-5 cytosine-specific DNA methylase NHY65_18735 PF00929 Exonuclease NHY65_18775 PF07690 Major Facilitator Superfamily NHY65_18780 PF13533 Biotin-lipoyl like NHY65_18785 PF03061 Thioesterase superfamily NHY65_18790 PF00490 Delta-aminolevulinic acid dehydratase NHY65_18795 PF01266 FAD dependent oxidoreductase NHY65_18800 PF01370 NAD dependent epimerase/dehydratase family NHY65_18800 PF08338 Domain of unknown function (DUF1731) NHY65_18820 PF00149 Calcineurin-like phosphoesterase NHY65_18820 PF12320 Type 5 capsule protein repressor C-terminal domain NHY65_18830 PF01168 Alanine racemase, N-terminal domain NHY65_18835 PF00437 Type II/IV secretion system protein NHY65_18840 PF00437 Type II/IV secretion system protein NHY65_18845 PF01475 Ferric uptake regulator family NHY65_18850 PF04355 SmpA / OmlA family NHY65_18865 PF01814 Hemerythrin HHE cation binding domain NHY65_18885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY65_18885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY65_18885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY65_18885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY65_18890 PF00692 dUTPase NHY65_18900 PF13488 Glycine zipper NHY65_18900 PF00691 OmpA family NHY65_18915 PF03775 Septum formation inhibitor MinC, C-terminal domain NHY65_18925 PF03776 Septum formation topological specificity factor MinE NHY65_18940 PF01810 LysE type translocator NHY65_18945 PF01580 FtsK/SpoIIIE family NHY65_18945 PF17854 FtsK alpha domain NHY65_18945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NHY65_18945 PF09397 Ftsk gamma domain NHY65_18950 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY65_18960 PF04376 Arginine-tRNA-protein transferase, N terminus NHY65_18960 PF04377 Arginine-tRNA-protein transferase, C terminus NHY65_18965 PF00583 Acetyltransferase (GNAT) family NHY65_18980 PF00009 Elongation factor Tu GTP binding domain NHY65_18980 PF03144 Elongation factor Tu domain 2 NHY65_18980 PF03143 Elongation factor Tu C-terminal domain NHY65_18985 PF03764 Elongation factor G, domain IV NHY65_18985 PF03144 Elongation factor Tu domain 2 NHY65_18985 PF00009 Elongation factor Tu GTP binding domain NHY65_18985 PF14492 Elongation Factor G, domain II NHY65_18985 PF00679 Elongation factor G C-terminus NHY65_18990 PF00177 Ribosomal protein S7p/S5e NHY65_18995 PF00164 Ribosomal protein S12/S23 NHY65_19005 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY65_19005 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY65_19010 PF03653 Uncharacterised protein family (UPF0093) NHY65_19015 PF05726 Pirin C-terminal cupin domain NHY65_19015 PF02678 Pirin NHY65_19025 PF02540 NAD synthase NHY65_19025 PF00795 Carbon-nitrogen hydrolase NHY65_19045 PF00171 Aldehyde dehydrogenase family NHY65_19050 PF00355 Rieske [2Fe-2S] domain NHY65_19050 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY65_19055 PF07859 alpha/beta hydrolase fold NHY65_19060 PF02028 BCCT, betaine/carnitine/choline family transporter NHY65_19070 PF03466 LysR substrate binding domain NHY65_19070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY65_19090 PF00037 4Fe-4S binding domain NHY65_19095 PF01467 Cytidylyltransferase-like NHY65_19100 PF01668 SmpB protein NHY65_19105 PF03358 NADPH-dependent FMN reductase NHY65_19110 PF02578 Multi-copper polyphenol oxidoreductase laccase NHY65_19115 PF00849 RNA pseudouridylate synthase NHY65_19115 PF01479 S4 domain NHY65_19120 PF13525 Outer membrane lipoprotein NHY65_19125 PF10410 DnaB-helicase binding domain of primase NHY65_19125 PF08278 DNA primase DnaG DnaB-binding NHY65_19125 PF08275 DNA primase catalytic core, N-terminal domain NHY65_19125 PF01807 CHC2 zinc finger NHY65_19130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NHY65_19130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NHY65_19130 PF01488 Shikimate / quinate 5-dehydrogenase NHY65_19140 PF03550 Outer membrane lipoprotein LolB NHY65_19195 PF01556 DnaJ C terminal domain NHY65_19195 PF00684 DnaJ central domain NHY65_19195 PF00226 DnaJ domain NHY65_19290 PF05816 Toxic anion resistance protein (TelA) NHY65_19305 PF17762 HTH domain found in ParB protein NHY65_19305 PF02195 ParB-like nuclease domain NHY65_19310 PF13614 AAA domain NHY65_19375 PF00816 H-NS histone family NHY65_19380 PF00565 Staphylococcal nuclease homologue NHY65_19470 PF11799 impB/mucB/samB family C-terminal domain NHY65_19470 PF13438 Domain of unknown function (DUF4113) NHY65_19470 PF00817 impB/mucB/samB family NHY65_19495 PF06122 Conjugative relaxosome accessory transposon protein NHY65_19510 PF06986 Type-1V conjugative transfer system mating pair stabilisation NHY65_19525 PF06834 TraU protein NHY65_19560 PF10411 Disulfide bond isomerase protein N-terminus NHY65_19560 PF13098 Thioredoxin-like domain NHY65_19600 PF01464 Transglycosylase SLT domain NHY65_19615 PF02796 Helix-turn-helix domain of resolvase NHY65_19615 PF00239 Resolvase, N terminal domain NHY65_19655 PF07057 DNA helicase TraI NHY65_19655 PF18340 DNA relaxase TraI 2B/2B-like domain NHY65_19655 PF18272 single-stranded DNA binding TraI N-terminal subdomain NHY65_19655 PF08751 TrwC relaxase