locus-tag class description NHY66_00010 PF04972 BON domain NHY66_00020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY66_00035 PF01810 LysE type translocator NHY66_00045 PF13411 MerR HTH family regulatory protein NHY66_00055 PF01494 FAD binding domain NHY66_00065 PF05195 Aminopeptidase P, N-terminal domain NHY66_00065 PF00557 Metallopeptidase family M24 NHY66_00105 PF08019 Phosphoethanolamine transferase EptA/EptB NHY66_00105 PF00884 Sulfatase NHY66_00475 PF01812 5-formyltetrahydrofolate cyclo-ligase family NHY66_00480 PF00691 OmpA family NHY66_00480 PF04355 SmpA / OmlA family NHY66_00495 PF05662 Coiled stalk of trimeric autotransporter adhesin NHY66_00495 PF05658 Head domain of trimeric autotransporter adhesin NHY66_00495 PF13018 Extended Signal Peptide of Type V secretion system NHY66_00495 PF03895 YadA-like membrane anchor domain NHY66_00500 PF13018 Extended Signal Peptide of Type V secretion system NHY66_00500 PF03895 YadA-like membrane anchor domain NHY66_00500 PF05658 Head domain of trimeric autotransporter adhesin NHY66_00500 PF05662 Coiled stalk of trimeric autotransporter adhesin NHY66_00510 PF13018 Extended Signal Peptide of Type V secretion system NHY66_00510 PF03895 YadA-like membrane anchor domain NHY66_00510 PF05658 Head domain of trimeric autotransporter adhesin NHY66_00510 PF05662 Coiled stalk of trimeric autotransporter adhesin NHY66_00525 PF02590 Predicted SPOUT methyltransferase NHY66_00530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NHY66_00540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY66_00540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY66_00545 PF04060 Putative Fe-S cluster NHY66_00550 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY66_00550 PF00633 Helix-hairpin-helix motif NHY66_00550 PF10576 Iron-sulfur binding domain of endonuclease III NHY66_00560 PF05191 Adenylate kinase, active site lid NHY66_00575 PF03717 Penicillin-binding Protein dimerisation domain NHY66_00575 PF00905 Penicillin binding protein transpeptidase domain NHY66_00595 PF01730 UreF NHY66_00600 PF05194 UreE urease accessory protein, C-terminal domain NHY66_00600 PF02814 UreE urease accessory protein, N-terminal domain NHY66_00610 PF00699 Urease beta subunit NHY66_00615 PF00547 Urease, gamma subunit NHY66_00620 PF01774 UreD urease accessory protein NHY66_00635 PF00463 Isocitrate lyase family NHY66_00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_00640 PF03466 LysR substrate binding domain NHY66_00645 PF03471 Transporter associated domain NHY66_00645 PF01595 Cyclin M transmembrane N-terminal domain NHY66_00645 PF00571 CBS domain NHY66_00650 PF03600 Citrate transporter NHY66_00670 PF01507 Phosphoadenosine phosphosulfate reductase family NHY66_00680 PF14052 Capsule assembly protein Wzi NHY66_00700 PF00301 Rubredoxin NHY66_00705 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_00705 PF18113 Rubredoxin binding C-terminal domain NHY66_00710 PF00561 alpha/beta hydrolase fold NHY66_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_00715 PF03466 LysR substrate binding domain NHY66_00725 PF02503 Polyphosphate kinase middle domain NHY66_00725 PF13090 Polyphosphate kinase C-terminal domain 2 NHY66_00725 PF17941 Polyphosphate kinase C-terminal domain 1 NHY66_00725 PF13089 Polyphosphate kinase N-terminal domain NHY66_00730 PF00912 Transglycosylase NHY66_00735 PF01694 Rhomboid family NHY66_00745 PF00005 ABC transporter NHY66_00750 PF13472 GDSL-like Lipase/Acylhydrolase family NHY66_00755 PF00484 Carbonic anhydrase NHY66_00770 PF07715 TonB-dependent Receptor Plug Domain NHY66_00770 PF00593 TonB dependent receptor NHY66_00775 PF01521 Iron-sulphur cluster biosynthesis NHY66_00775 PF01106 NifU-like domain NHY66_00790 PF03781 Sulfatase-modifying factor enzyme 1 NHY66_00805 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_00810 PF01384 Phosphate transporter family NHY66_00815 PF02310 B12 binding domain NHY66_00815 PF02607 B12 binding domain NHY66_00815 PF02965 Vitamin B12 dependent methionine synthase, activation domain NHY66_00815 PF00809 Pterin binding enzyme NHY66_00815 PF02574 Homocysteine S-methyltransferase NHY66_00820 PF02780 Transketolase, C-terminal domain NHY66_00820 PF02779 Transketolase, pyrimidine binding domain NHY66_00825 PF00456 Transketolase, thiamine diphosphate binding domain NHY66_00830 PF07690 Major Facilitator Superfamily NHY66_00840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_00840 PF03466 LysR substrate binding domain NHY66_00850 PF01263 Aldose 1-epimerase NHY66_00855 PF07690 Major Facilitator Superfamily NHY66_00860 PF02311 AraC-like ligand binding domain NHY66_00860 PF12833 Helix-turn-helix domain NHY66_00865 PF04960 Glutaminase NHY66_00870 PF01327 Polypeptide deformylase NHY66_00875 PF07690 Major Facilitator Superfamily NHY66_00885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY66_00885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY66_00885 PF00205 Thiamine pyrophosphate enzyme, central domain NHY66_00890 PF00171 Aldehyde dehydrogenase family NHY66_00895 PF01958 Domain of unknown function DUF108 NHY66_00895 PF03447 Homoserine dehydrogenase, NAD binding domain NHY66_00905 PF12697 Alpha/beta hydrolase family NHY66_00920 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_00920 PF14759 Reductase C-terminal NHY66_00925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY66_00935 PF00355 Rieske [2Fe-2S] domain NHY66_00945 PF00355 Rieske [2Fe-2S] domain NHY66_00950 PF01614 Bacterial transcriptional regulator NHY66_00950 PF09339 IclR helix-turn-helix domain NHY66_00965 PF00378 Enoyl-CoA hydratase/isomerase NHY66_00985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY66_00990 PF07152 YaeQ protein NHY66_00995 PF00375 Sodium:dicarboxylate symporter family NHY66_01000 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY66_01000 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY66_01010 PF03061 Thioesterase superfamily NHY66_01020 PF02028 BCCT, betaine/carnitine/choline family transporter NHY66_01025 PF02028 BCCT, betaine/carnitine/choline family transporter NHY66_01030 PF13977 BetI-type transcriptional repressor, C-terminal NHY66_01030 PF00440 Bacterial regulatory proteins, tetR family NHY66_01040 PF05199 GMC oxidoreductase NHY66_01040 PF00732 GMC oxidoreductase NHY66_01045 PF06039 Malate:quinone oxidoreductase (Mqo) NHY66_01055 PF02574 Homocysteine S-methyltransferase NHY66_01060 PF13520 Amino acid permease NHY66_01085 PF00701 Dihydrodipicolinate synthetase family NHY66_01090 PF00083 Sugar (and other) transporter NHY66_01240 PF00712 DNA polymerase III beta subunit, N-terminal domain NHY66_01240 PF02768 DNA polymerase III beta subunit, C-terminal domain NHY66_01240 PF02767 DNA polymerase III beta subunit, central domain NHY66_01285 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NHY66_01530 PF01555 DNA methylase NHY66_01535 PF01555 DNA methylase NHY66_01565 PF01555 DNA methylase NHY66_01570 PF00145 C-5 cytosine-specific DNA methylase NHY66_01640 PF00929 Exonuclease NHY66_01680 PF07690 Major Facilitator Superfamily NHY66_01690 PF03061 Thioesterase superfamily NHY66_01695 PF00490 Delta-aminolevulinic acid dehydratase NHY66_01700 PF01266 FAD dependent oxidoreductase NHY66_01705 PF01370 NAD dependent epimerase/dehydratase family NHY66_01705 PF08338 Domain of unknown function (DUF1731) NHY66_01725 PF00149 Calcineurin-like phosphoesterase NHY66_01725 PF12320 Type 5 capsule protein repressor C-terminal domain NHY66_01735 PF01168 Alanine racemase, N-terminal domain NHY66_01740 PF00437 Type II/IV secretion system protein NHY66_01745 PF00437 Type II/IV secretion system protein NHY66_01750 PF01475 Ferric uptake regulator family NHY66_01755 PF04355 SmpA / OmlA family NHY66_01760 PF03658 RnfH family Ubiquitin NHY66_01770 PF01814 Hemerythrin HHE cation binding domain NHY66_01775 PF13230 Glutamine amidotransferases class-II NHY66_01785 PF00696 Amino acid kinase family NHY66_01790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY66_01790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY66_01790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY66_01790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY66_01795 PF00692 dUTPase NHY66_01805 PF13488 Glycine zipper NHY66_01805 PF00691 OmpA family NHY66_01810 PF01553 Acyltransferase NHY66_01820 PF03775 Septum formation inhibitor MinC, C-terminal domain NHY66_01825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NHY66_01830 PF03776 Septum formation topological specificity factor MinE NHY66_01855 PF01580 FtsK/SpoIIIE family NHY66_01855 PF09397 Ftsk gamma domain NHY66_01855 PF17854 FtsK alpha domain NHY66_01855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NHY66_01860 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_01870 PF04376 Arginine-tRNA-protein transferase, N terminus NHY66_01870 PF04377 Arginine-tRNA-protein transferase, C terminus NHY66_01875 PF00583 Acetyltransferase (GNAT) family NHY66_01895 PF00679 Elongation factor G C-terminus NHY66_01895 PF14492 Elongation Factor G, domain II NHY66_01895 PF03764 Elongation factor G, domain IV NHY66_01895 PF03144 Elongation factor Tu domain 2 NHY66_01895 PF00009 Elongation factor Tu GTP binding domain NHY66_01900 PF00177 Ribosomal protein S7p/S5e NHY66_01905 PF00164 Ribosomal protein S12/S23 NHY66_01915 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY66_01915 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY66_01920 PF03653 Uncharacterised protein family (UPF0093) NHY66_01925 PF05726 Pirin C-terminal cupin domain NHY66_01925 PF02678 Pirin NHY66_01935 PF02540 NAD synthase NHY66_01935 PF00795 Carbon-nitrogen hydrolase NHY66_01955 PF00171 Aldehyde dehydrogenase family NHY66_01960 PF00355 Rieske [2Fe-2S] domain NHY66_01960 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY66_01965 PF07859 alpha/beta hydrolase fold NHY66_01980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_01980 PF03466 LysR substrate binding domain NHY66_02000 PF00037 4Fe-4S binding domain NHY66_02005 PF01467 Cytidylyltransferase-like NHY66_02010 PF01668 SmpB protein NHY66_02015 PF03358 NADPH-dependent FMN reductase NHY66_02020 PF02578 Multi-copper polyphenol oxidoreductase laccase NHY66_02025 PF01479 S4 domain NHY66_02025 PF00849 RNA pseudouridylate synthase NHY66_02030 PF13525 Outer membrane lipoprotein NHY66_02040 PF01488 Shikimate / quinate 5-dehydrogenase NHY66_02040 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NHY66_02040 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NHY66_02050 PF03550 Outer membrane lipoprotein LolB NHY66_02055 PF08544 GHMP kinases C terminal NHY66_02055 PF00288 GHMP kinases N terminal domain NHY66_02080 PF14572 Phosphoribosyl synthetase-associated domain NHY66_02080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY66_02085 PF01386 Ribosomal L25p family NHY66_02090 PF01195 Peptidyl-tRNA hydrolase NHY66_02095 PF02261 Aspartate decarboxylase NHY66_02110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY66_02125 PF01476 LysM domain NHY66_02125 PF04972 BON domain NHY66_02130 PF00550 Phosphopantetheine attachment site NHY66_02140 PF00698 Acyl transferase domain NHY66_02145 PF01783 Ribosomal L32p protein family NHY66_02150 PF02620 Large ribosomal RNA subunit accumulation protein YceD NHY66_02155 PF04315 Elongation factor P hydroxylase NHY66_02160 PF01300 Telomere recombination NHY66_02165 PF02616 Segregation and condensation protein ScpA NHY66_02170 PF04079 Segregation and condensation complex subunit ScpB NHY66_02190 PF00155 Aminotransferase class I and II NHY66_02195 PF04055 Radical SAM superfamily NHY66_02195 PF06968 Biotin and Thiamin Synthesis associated domain NHY66_02195 PF00202 Aminotransferase class-III NHY66_02200 PF08241 Methyltransferase domain NHY66_02200 PF12697 Alpha/beta hydrolase family NHY66_02205 PF02358 Trehalose-phosphatase NHY66_02210 PF00982 Glycosyltransferase family 20 NHY66_02215 PF07690 Major Facilitator Superfamily NHY66_02220 PF00210 Ferritin-like domain NHY66_02245 PF01925 Sulfite exporter TauE/SafE NHY66_02260 PF02881 SRP54-type protein, helical bundle domain NHY66_02260 PF02978 Signal peptide binding domain NHY66_02260 PF00448 SRP54-type protein, GTPase domain NHY66_02270 PF01207 Dihydrouridine synthase (Dus) NHY66_02300 PF00692 dUTPase NHY66_02360 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_02375 PF05552 Conserved TM helix NHY66_02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_02395 PF03466 LysR substrate binding domain NHY66_02400 PF00313 'Cold-shock' DNA-binding domain NHY66_02415 PF00361 Proton-conducting membrane transporter NHY66_02425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY66_02430 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NHY66_02435 PF12838 4Fe-4S dicluster domain NHY66_02450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NHY66_02450 PF10531 SLBB domain NHY66_02450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NHY66_02465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NHY66_02470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NHY66_02475 PF17151 Periplasmic sensor domain NHY66_02475 PF00990 Diguanylate cyclase, GGDEF domain NHY66_02485 PF00672 HAMP domain NHY66_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_02485 PF00512 His Kinase A (phospho-acceptor) domain NHY66_02490 PF00072 Response regulator receiver domain NHY66_02490 PF00486 Transcriptional regulatory protein, C terminal NHY66_02500 PF03477 ATP cone domain NHY66_02500 PF00317 Ribonucleotide reductase, all-alpha domain NHY66_02500 PF02867 Ribonucleotide reductase, barrel domain NHY66_02510 PF00268 Ribonucleotide reductase, small chain NHY66_02530 PF13756 Stimulus-sensing domain NHY66_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_02530 PF00672 HAMP domain NHY66_02530 PF00512 His Kinase A (phospho-acceptor) domain NHY66_02530 PF13755 Sensor N-terminal transmembrane domain NHY66_02625 PF02567 Phenazine biosynthesis-like protein NHY66_02650 PF01613 Flavin reductase like domain NHY66_02655 PF01717 Cobalamin-independent synthase, Catalytic domain NHY66_02655 PF08267 Cobalamin-independent synthase, N-terminal domain NHY66_02665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_02665 PF03466 LysR substrate binding domain NHY66_02670 PF01810 LysE type translocator NHY66_02680 PF12833 Helix-turn-helix domain NHY66_02680 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NHY66_02685 PF07687 Peptidase dimerisation domain NHY66_02685 PF01546 Peptidase family M20/M25/M40 NHY66_02700 PF07690 Major Facilitator Superfamily NHY66_02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_02710 PF03466 LysR substrate binding domain NHY66_02715 PF00890 FAD binding domain NHY66_02715 PF14537 Cytochrome c3 NHY66_02725 PF02515 CoA-transferase family III NHY66_02730 PF07690 Major Facilitator Superfamily NHY66_02735 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_02735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_02735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_02740 PF03466 LysR substrate binding domain NHY66_02745 PF00107 Zinc-binding dehydrogenase NHY66_02745 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_02750 PF00962 Adenosine/AMP deaminase NHY66_02775 PF02445 Quinolinate synthetase A protein NHY66_02780 PF01960 ArgJ family NHY66_02785 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY66_02785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY66_02790 PF00893 Small Multidrug Resistance protein NHY66_02800 PF05275 Copper resistance protein B precursor (CopB) NHY66_02820 PF00834 Ribulose-phosphate 3 epimerase family NHY66_02840 PF04445 Putative SAM-dependent methyltransferase NHY66_02845 PF00814 Glycoprotease family NHY66_02850 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_02855 PF00293 NUDIX domain NHY66_02900 PF00155 Aminotransferase class I and II NHY66_02905 PF00815 Histidinol dehydrogenase NHY66_02910 PF01634 ATP phosphoribosyltransferase NHY66_02915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY66_02920 PF01722 BolA-like protein NHY66_02925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NHY66_02930 PF04552 Sigma-54, DNA binding domain NHY66_02930 PF04963 Sigma-54 factor, core binding domain NHY66_02930 PF00309 Sigma-54 factor, Activator interacting domain (AID) NHY66_02975 PF00795 Carbon-nitrogen hydrolase NHY66_02985 PF01047 MarR family NHY66_02990 PF02566 OsmC-like protein NHY66_02995 PF00437 Type II/IV secretion system protein NHY66_03015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NHY66_03015 PF01367 5'-3' exonuclease, C-terminal SAM fold NHY66_03015 PF00476 DNA polymerase family A NHY66_03015 PF01612 3'-5' exonuclease NHY66_03020 PF02325 YGGT family NHY66_03025 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY66_03025 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY66_03030 PF01171 PP-loop family NHY66_03030 PF11734 TilS substrate C-terminal domain NHY66_03030 PF09179 TilS substrate binding domain NHY66_03035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NHY66_03040 PF02541 Ppx/GppA phosphatase family NHY66_03045 PF00085 Thioredoxin NHY66_03065 PF00216 Bacterial DNA-binding protein NHY66_03075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NHY66_03075 PF01409 tRNA synthetases class II core domain (F) NHY66_03095 PF00453 Ribosomal protein L20 NHY66_03100 PF01632 Ribosomal protein L35 NHY66_03110 PF07690 Major Facilitator Superfamily NHY66_03115 PF09335 SNARE associated Golgi protein NHY66_03120 PF00043 Glutathione S-transferase, C-terminal domain NHY66_03120 PF02798 Glutathione S-transferase, N-terminal domain NHY66_03125 PF00707 Translation initiation factor IF-3, C-terminal domain NHY66_03125 PF05198 Translation initiation factor IF-3, N-terminal domain NHY66_03130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY66_03130 PF02824 TGS domain NHY66_03130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY66_03130 PF03129 Anticodon binding domain NHY66_03140 PF04751 Protein of unknown function (DUF615) NHY66_03145 PF00381 PTS HPr component phosphorylation site NHY66_03150 PF03668 P-loop ATPase protein family NHY66_03160 PF02548 Ketopantoate hydroxymethyltransferase NHY66_03165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NHY66_03170 PF01743 Poly A polymerase head domain NHY66_03170 PF12626 Polymerase A arginine-rich C-terminus NHY66_03170 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY66_03190 PF13291 ACT domain NHY66_03190 PF04607 Region found in RelA / SpoT proteins NHY66_03190 PF02824 TGS domain NHY66_03195 PF05958 tRNA (Uracil-5-)-methyltransferase NHY66_03205 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_03220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY66_03220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY66_03225 PF01261 Xylose isomerase-like TIM barrel NHY66_03235 PF00106 short chain dehydrogenase NHY66_03240 PF02233 NAD(P) transhydrogenase beta subunit NHY66_03245 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NHY66_03255 PF00892 EamA-like transporter family NHY66_03270 PF01207 Dihydrouridine synthase (Dus) NHY66_03290 PF00899 ThiF family NHY66_03300 PF00330 Aconitase family (aconitate hydratase) NHY66_03300 PF00694 Aconitase C-terminal domain NHY66_03305 PF01026 TatD related DNase NHY66_03320 PF03144 Elongation factor Tu domain 2 NHY66_03320 PF16658 Class II release factor RF3, C-terminal domain NHY66_03320 PF00009 Elongation factor Tu GTP binding domain NHY66_03340 PF00563 EAL domain NHY66_03340 PF00990 Diguanylate cyclase, GGDEF domain NHY66_03340 PF03707 Bacterial signalling protein N terminal repeat NHY66_03345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NHY66_03345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NHY66_03350 PF10369 Small subunit of acetolactate synthase NHY66_03385 PF02687 FtsX-like permease family NHY66_03385 PF12704 MacB-like periplasmic core domain NHY66_03385 PF00005 ABC transporter NHY66_03405 PF00929 Exonuclease NHY66_03410 PF03193 RsgA GTPase NHY66_03420 PF00462 Glutaredoxin NHY66_03425 PF02556 Preprotein translocase subunit SecB NHY66_03455 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY66_03455 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY66_03465 PF04820 Tryptophan halogenase NHY66_03510 PF00550 Phosphopantetheine attachment site NHY66_03515 PF00550 Phosphopantetheine attachment site NHY66_03530 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NHY66_03530 PF01926 50S ribosome-binding GTPase NHY66_03535 PF13360 PQQ-like domain NHY66_03545 PF03129 Anticodon binding domain NHY66_03545 PF13393 Histidyl-tRNA synthetase NHY66_03550 PF04551 GcpE protein NHY66_03555 PF13464 Domain of unknown function (DUF4115) NHY66_03565 PF04055 Radical SAM superfamily NHY66_03570 PF00334 Nucleoside diphosphate kinase NHY66_03575 PF04384 Iron-sulphur cluster assembly NHY66_03580 PF01569 PAP2 superfamily NHY66_03590 PF11818 C-terminal domain of tail specific protease (DUF3340) NHY66_03590 PF00595 PDZ domain NHY66_03590 PF03572 Peptidase family S41 NHY66_03590 PF17804 Tail specific protease N-terminal domain NHY66_03605 PF00561 alpha/beta hydrolase fold NHY66_03615 PF00171 Aldehyde dehydrogenase family NHY66_03620 PF01202 Shikimate kinase NHY66_03625 PF02447 GntP family permease NHY66_03630 PF01081 KDPG and KHG aldolase NHY66_03640 PF00871 Acetokinase family NHY66_03645 PF07085 DRTGG domain NHY66_03645 PF01515 Phosphate acetyl/butaryl transferase NHY66_03650 PF05681 Fumarate hydratase (Fumerase) NHY66_03650 PF05683 Fumarase C-terminus NHY66_03665 PF06689 ClpX C4-type zinc finger NHY66_03665 PF10431 C-terminal, D2-small domain, of ClpB protein NHY66_03665 PF07724 AAA domain (Cdc48 subfamily) NHY66_03675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY66_03675 PF05697 Bacterial trigger factor protein (TF) NHY66_03675 PF05698 Bacterial trigger factor protein (TF) C-terminus NHY66_03685 PF13640 2OG-Fe(II) oxygenase superfamily NHY66_03685 PF18331 PKHD-type hydroxylase C-terminal domain NHY66_03690 PF00682 HMGL-like NHY66_03690 PF08502 LeuA allosteric (dimerisation) domain NHY66_03695 PF00561 alpha/beta hydrolase fold NHY66_03710 PF01725 Ham1 family NHY66_03720 PF02416 mttA/Hcf106 family NHY66_03725 PF02416 mttA/Hcf106 family NHY66_03730 PF00902 Sec-independent protein translocase protein (TatC) NHY66_03750 PF01790 Prolipoprotein diacylglyceryl transferase NHY66_03765 PF00303 Thymidylate synthase NHY66_03770 PF00186 Dihydrofolate reductase NHY66_03780 PF01625 Peptide methionine sulfoxide reductase NHY66_03800 PF01842 ACT domain NHY66_03800 PF00551 Formyl transferase NHY66_03810 PF00171 Aldehyde dehydrogenase family NHY66_03815 PF00830 Ribosomal L28 family NHY66_03820 PF00471 Ribosomal protein L33 NHY66_03845 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NHY66_03865 PF08272 Topoisomerase I zinc-ribbon-like NHY66_03865 PF01751 Toprim domain NHY66_03865 PF01396 Topoisomerase DNA binding C4 zinc finger NHY66_03865 PF01131 DNA topoisomerase NHY66_03875 PF01638 HxlR-like helix-turn-helix NHY66_03880 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_03880 PF00107 Zinc-binding dehydrogenase NHY66_03885 PF04102 SlyX NHY66_03895 PF01810 LysE type translocator NHY66_03900 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY66_03910 PF00375 Sodium:dicarboxylate symporter family NHY66_03920 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY66_03920 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY66_03940 PF01416 tRNA pseudouridine synthase NHY66_03950 PF01176 Translation initiation factor 1A / IF-1 NHY66_03965 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY66_03980 PF00330 Aconitase family (aconitate hydratase) NHY66_03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_03990 PF03466 LysR substrate binding domain NHY66_04010 PF00293 NUDIX domain NHY66_04015 PF05524 PEP-utilising enzyme, N-terminal NHY66_04015 PF01590 GAF domain NHY66_04015 PF00391 PEP-utilising enzyme, mobile domain NHY66_04015 PF02896 PEP-utilising enzyme, TIM barrel domain NHY66_04020 PF00141 Peroxidase NHY66_04025 PF12706 Beta-lactamase superfamily domain NHY66_04030 PF03466 LysR substrate binding domain NHY66_04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_04045 PF13280 WYL domain NHY66_04045 PF08279 HTH domain NHY66_04055 PF01479 S4 domain NHY66_04055 PF00849 RNA pseudouridylate synthase NHY66_04065 PF00501 AMP-binding enzyme NHY66_04065 PF13193 AMP-binding enzyme C-terminal domain NHY66_04080 PF03466 LysR substrate binding domain NHY66_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_04085 PF00106 short chain dehydrogenase NHY66_04090 PF04055 Radical SAM superfamily NHY66_04090 PF06969 HemN C-terminal domain NHY66_04100 PF01554 MatE NHY66_04110 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY66_04110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_04115 PF03109 ABC1 family NHY66_04120 PF01197 Ribosomal protein L31 NHY66_04155 PF03884 DNA gyrase inhibitor YacG NHY66_04160 PF00753 Metallo-beta-lactamase superfamily NHY66_04165 PF00762 Ferrochelatase NHY66_04175 PF01177 Asp/Glu/Hydantoin racemase NHY66_04195 PF00571 CBS domain NHY66_04195 PF03471 Transporter associated domain NHY66_04220 PF07963 Prokaryotic N-terminal methylation motif NHY66_04220 PF08334 Type II secretion system (T2SS), protein G NHY66_04225 PF00482 Type II secretion system (T2SS), protein F NHY66_04235 PF00999 Sodium/hydrogen exchanger family NHY66_04235 PF02254 TrkA-N domain NHY66_04240 PF01430 Hsp33 protein NHY66_04250 PF01556 DnaJ C terminal domain NHY66_04250 PF00226 DnaJ domain NHY66_04260 PF01544 CorA-like Mg2+ transporter protein NHY66_04270 PF00312 Ribosomal protein S15 NHY66_04280 PF13538 UvrD-like helicase C-terminal domain NHY66_04300 PF03976 Polyphosphate kinase 2 (PPK2) NHY66_04310 PF01209 ubiE/COQ5 methyltransferase family NHY66_04320 PF03109 ABC1 family NHY66_04330 PF01502 Phosphoribosyl-AMP cyclohydrolase NHY66_04345 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NHY66_04345 PF00361 Proton-conducting membrane transporter NHY66_04345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NHY66_04345 PF13244 Domain of unknown function (DUF4040) NHY66_04355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY66_04360 PF00361 Proton-conducting membrane transporter NHY66_04365 PF01899 Na+/H+ ion antiporter subunit NHY66_04370 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NHY66_04375 PF03334 Na+/H+ antiporter subunit NHY66_04380 PF02033 Ribosome-binding factor A NHY66_04390 PF13184 NusA-like KH domain NHY66_04390 PF08529 NusA N-terminal domain NHY66_04390 PF00575 S1 RNA binding domain NHY66_04395 PF17384 RimP C-terminal SH3 domain NHY66_04395 PF02576 RimP N-terminal domain NHY66_04425 PF00437 Type II/IV secretion system protein NHY66_04425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NHY66_04430 PF00482 Type II secretion system (T2SS), protein F NHY66_04440 PF06750 Bacterial Peptidase A24 N-terminal domain NHY66_04440 PF01478 Type IV leader peptidase family NHY66_04445 PF01121 Dephospho-CoA kinase NHY66_04455 PF00588 SpoU rRNA Methylase family NHY66_04455 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY66_04460 PF06865 Pyrimidine/purine nucleoside phosphorylase NHY66_04470 PF02463 RecF/RecN/SMC N terminal domain NHY66_04475 PF02622 Uncharacterized ACR, COG1678 NHY66_04480 PF03652 Holliday junction resolvase NHY66_04485 PF13533 Biotin-lipoyl like NHY66_04510 PF02805 Metal binding domain of Ada NHY66_04510 PF12833 Helix-turn-helix domain NHY66_04510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY66_04510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY66_04525 PF02151 UvrB/uvrC motif NHY66_04525 PF08459 UvrC Helix-hairpin-helix N-terminal NHY66_04525 PF01541 GIY-YIG catalytic domain NHY66_04545 PF00378 Enoyl-CoA hydratase/isomerase NHY66_04545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY66_04545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY66_04550 PF02803 Thiolase, C-terminal domain NHY66_04550 PF00108 Thiolase, N-terminal domain NHY66_04570 PF09278 MerR, DNA binding NHY66_04570 PF00376 MerR family regulatory protein NHY66_04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_04595 PF00183 Hsp90 protein NHY66_04610 PF03553 Na+/H+ antiporter family NHY66_04610 PF13726 Na+-H+ antiporter family NHY66_04615 PF00561 alpha/beta hydrolase fold NHY66_04635 PF04983 RNA polymerase Rpb1, domain 3 NHY66_04635 PF05000 RNA polymerase Rpb1, domain 4 NHY66_04635 PF04998 RNA polymerase Rpb1, domain 5 NHY66_04635 PF04997 RNA polymerase Rpb1, domain 1 NHY66_04635 PF00623 RNA polymerase Rpb1, domain 2 NHY66_04640 PF00562 RNA polymerase Rpb2, domain 6 NHY66_04640 PF10385 RNA polymerase beta subunit external 1 domain NHY66_04640 PF04565 RNA polymerase Rpb2, domain 3 NHY66_04640 PF04561 RNA polymerase Rpb2, domain 2 NHY66_04640 PF04563 RNA polymerase beta subunit NHY66_04640 PF04560 RNA polymerase Rpb2, domain 7 NHY66_04645 PF16320 Ribosomal protein L7/L12 dimerisation domain NHY66_04645 PF00542 Ribosomal protein L7/L12 C-terminal domain NHY66_04650 PF00466 Ribosomal protein L10 NHY66_04655 PF00687 Ribosomal protein L1p/L10e family NHY66_04660 PF00298 Ribosomal protein L11, RNA binding domain NHY66_04660 PF03946 Ribosomal protein L11, N-terminal domain NHY66_04665 PF02357 Transcription termination factor nusG NHY66_04665 PF00467 KOW motif NHY66_04670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NHY66_04680 PF00009 Elongation factor Tu GTP binding domain NHY66_04680 PF03144 Elongation factor Tu domain 2 NHY66_04680 PF03143 Elongation factor Tu C-terminal domain NHY66_04710 PF13419 Haloacid dehalogenase-like hydrolase NHY66_04715 PF12401 Protein of unknown function (DUF2662) NHY66_04715 PF00498 FHA domain NHY66_04720 PF00263 Bacterial type II and III secretion system protein NHY66_04720 PF03958 Bacterial type II/III secretion system short domain NHY66_04735 PF00816 H-NS histone family NHY66_04760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NHY66_04760 PF03900 Porphobilinogen deaminase, C-terminal domain NHY66_04765 PF04397 LytTr DNA-binding domain NHY66_04765 PF00072 Response regulator receiver domain NHY66_04770 PF07694 5TMR of 5TMR-LYT NHY66_04770 PF06580 Histidine kinase NHY66_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_04775 PF14698 Argininosuccinate lyase C-terminal NHY66_04775 PF00206 Lyase NHY66_04780 PF04362 Bacterial Fe(2+) trafficking NHY66_04785 PF01895 PhoU domain NHY66_04790 PF02321 Outer membrane efflux protein NHY66_04810 PF01964 Radical SAM ThiC family NHY66_04810 PF13667 ThiC-associated domain NHY66_04815 PF00293 NUDIX domain NHY66_04820 PF00149 Calcineurin-like phosphoesterase NHY66_04825 PF01258 Prokaryotic dksA/traR C4-type zinc finger NHY66_04830 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY66_04835 PF01098 Cell cycle protein NHY66_04840 PF02875 Mur ligase family, glutamate ligase domain NHY66_04840 PF08245 Mur ligase middle domain NHY66_04850 PF07670 Nucleoside recognition NHY66_04850 PF07664 Ferrous iron transport protein B C terminus NHY66_04850 PF02421 Ferrous iron transport protein B NHY66_04870 PF01842 ACT domain NHY66_04870 PF00742 Homoserine dehydrogenase NHY66_04870 PF03447 Homoserine dehydrogenase, NAD binding domain NHY66_04880 PF00768 D-alanyl-D-alanine carboxypeptidase NHY66_04885 PF00196 Bacterial regulatory proteins, luxR family NHY66_04885 PF00072 Response regulator receiver domain NHY66_04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_04890 PF00512 His Kinase A (phospho-acceptor) domain NHY66_04895 PF00072 Response regulator receiver domain NHY66_04895 PF00158 Sigma-54 interaction domain NHY66_04895 PF02954 Bacterial regulatory protein, Fis family NHY66_04905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NHY66_04905 PF01676 Metalloenzyme superfamily NHY66_04910 PF03739 Lipopolysaccharide export system permease LptF/LptG NHY66_04920 PF02789 Cytosol aminopeptidase family, N-terminal domain NHY66_04920 PF00883 Cytosol aminopeptidase family, catalytic domain NHY66_04940 PF00677 Lumazine binding domain NHY66_04950 PF01872 RibD C-terminal domain NHY66_04950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY66_04955 PF03477 ATP cone domain NHY66_04960 PF00909 Ammonium Transporter Family NHY66_04965 PF00543 Nitrogen regulatory protein P-II NHY66_04990 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NHY66_05010 PF00440 Bacterial regulatory proteins, tetR family NHY66_05010 PF02909 Tetracyclin repressor-like, C-terminal domain NHY66_05015 PF07690 Major Facilitator Superfamily NHY66_05055 PF00916 Sulfate permease family NHY66_05055 PF01740 STAS domain NHY66_05060 PF00582 Universal stress protein family NHY66_05090 PF00665 Integrase core domain NHY66_05100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY66_05100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY66_05100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY66_05100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY66_05120 PF00665 Integrase core domain NHY66_05140 PF02899 Phage integrase, N-terminal SAM-like domain NHY66_05140 PF00589 Phage integrase family NHY66_05180 PF00905 Penicillin binding protein transpeptidase domain NHY66_05240 PF00665 Integrase core domain NHY66_05250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY66_05250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY66_05250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY66_05250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY66_05270 PF00665 Integrase core domain NHY66_05290 PF02899 Phage integrase, N-terminal SAM-like domain NHY66_05290 PF00589 Phage integrase family NHY66_05380 PF00665 Integrase core domain NHY66_05395 PF00392 Bacterial regulatory proteins, gntR family NHY66_05395 PF00155 Aminotransferase class I and II NHY66_05405 PF00701 Dihydrodipicolinate synthetase family NHY66_05420 PF03573 outer membrane porin, OprD family NHY66_05425 PF00719 Inorganic pyrophosphatase NHY66_05445 PF03989 DNA gyrase C-terminal domain, beta-propeller NHY66_05445 PF00521 DNA gyrase/topoisomerase IV, subunit A NHY66_05450 PF07690 Major Facilitator Superfamily NHY66_05455 PF03458 UPF0126 domain NHY66_05465 PF03471 Transporter associated domain NHY66_05465 PF03741 Integral membrane protein TerC family NHY66_05470 PF03641 Possible lysine decarboxylase NHY66_05475 PF07690 Major Facilitator Superfamily NHY66_05485 PF00817 impB/mucB/samB family NHY66_05485 PF11799 impB/mucB/samB family C-terminal domain NHY66_05485 PF11798 IMS family HHH motif NHY66_05525 PF03358 NADPH-dependent FMN reductase NHY66_05535 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_05595 PF01327 Polypeptide deformylase NHY66_05605 PF02481 DNA recombination-mediator protein A NHY66_05605 PF17782 DprA winged helix domain NHY66_05610 PF01300 Telomere recombination NHY66_05615 PF00892 EamA-like transporter family NHY66_05620 PF00440 Bacterial regulatory proteins, tetR family NHY66_05625 PF07690 Major Facilitator Superfamily NHY66_05635 PF00255 Glutathione peroxidase NHY66_05645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NHY66_05650 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY66_05650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY66_05655 PF00231 ATP synthase NHY66_05665 PF00213 ATP synthase delta (OSCP) subunit NHY66_05670 PF00430 ATP synthase B/B' CF(0) NHY66_05675 PF00137 ATP synthase subunit C NHY66_05680 PF00119 ATP synthase A chain NHY66_05710 PF01810 LysE type translocator NHY66_05715 PF04261 Dyp-type peroxidase family NHY66_05725 PF00390 Malic enzyme, N-terminal domain NHY66_05725 PF03949 Malic enzyme, NAD binding domain NHY66_05730 PF03485 Arginyl tRNA synthetase N terminal domain NHY66_05730 PF05746 DALR anticodon binding domain NHY66_05730 PF00750 tRNA synthetases class I (R) NHY66_05750 PF05726 Pirin C-terminal cupin domain NHY66_05750 PF02678 Pirin NHY66_05760 PF03551 Transcriptional regulator PadR-like family NHY66_05765 PF13427 Domain of unknown function (DUF4111) NHY66_05765 PF01909 Nucleotidyltransferase domain NHY66_05780 PF07681 DoxX NHY66_05785 PF09335 SNARE associated Golgi protein NHY66_05800 PF13614 AAA domain NHY66_05810 PF01722 BolA-like protein NHY66_05830 PF12697 Alpha/beta hydrolase family NHY66_05850 PF16197 Ketoacyl-synthetase C-terminal extension NHY66_05850 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY66_05850 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY66_05850 PF08242 Methyltransferase domain NHY66_05850 PF14765 Polyketide synthase dehydratase NHY66_05850 PF00975 Thioesterase domain NHY66_05850 PF00550 Phosphopantetheine attachment site NHY66_05860 PF00501 AMP-binding enzyme NHY66_05865 PF03472 Autoinducer binding domain NHY66_05865 PF00196 Bacterial regulatory proteins, luxR family NHY66_05875 PF00765 Autoinducer synthase NHY66_05880 PF07690 Major Facilitator Superfamily NHY66_05880 PF00083 Sugar (and other) transporter NHY66_05885 PF00378 Enoyl-CoA hydratase/isomerase NHY66_05895 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_05895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_05895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_05900 PF00501 AMP-binding enzyme NHY66_05900 PF13193 AMP-binding enzyme C-terminal domain NHY66_05905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY66_05905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY66_05910 PF00171 Aldehyde dehydrogenase family NHY66_05925 PF00324 Amino acid permease NHY66_05935 PF01042 Endoribonuclease L-PSP NHY66_05945 PF01266 FAD dependent oxidoreductase NHY66_05950 PF01037 Lrp/AsnC ligand binding domain NHY66_05960 PF07715 TonB-dependent Receptor Plug Domain NHY66_05960 PF00593 TonB dependent receptor NHY66_05975 PF00849 RNA pseudouridylate synthase NHY66_05985 PF00106 short chain dehydrogenase NHY66_06010 PF13737 Transposase DDE domain NHY66_06025 PF13737 Transposase DDE domain NHY66_06045 PF00285 Citrate synthase, C-terminal domain NHY66_06055 PF07729 FCD domain NHY66_06055 PF00392 Bacterial regulatory proteins, gntR family NHY66_06065 PF00155 Aminotransferase class I and II NHY66_06070 PF09330 D-lactate dehydrogenase, membrane binding NHY66_06070 PF01565 FAD binding domain NHY66_06075 PF01070 FMN-dependent dehydrogenase NHY66_06090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY66_06090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY66_06090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY66_06090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY66_06100 PF16363 GDP-mannose 4,6 dehydratase NHY66_06105 PF00342 Phosphoglucose isomerase NHY66_06115 PF00483 Nucleotidyl transferase NHY66_06120 PF02397 Bacterial sugar transferase NHY66_06130 PF13439 Glycosyltransferase Family 4 NHY66_06130 PF00534 Glycosyl transferases group 1 NHY66_06140 PF13439 Glycosyltransferase Family 4 NHY66_06140 PF00534 Glycosyl transferases group 1 NHY66_06150 PF00535 Glycosyl transferase family 2 NHY66_06165 PF10531 SLBB domain NHY66_06165 PF02563 Polysaccharide biosynthesis/export protein NHY66_06165 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NHY66_06170 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY66_06175 PF13614 AAA domain NHY66_06175 PF13807 G-rich domain on putative tyrosine kinase NHY66_06175 PF02706 Chain length determinant protein NHY66_06180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY66_06180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY66_06185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY66_06185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY66_06190 PF03023 Lipid II flippase MurJ NHY66_06195 PF01510 N-acetylmuramoyl-L-alanine amidase NHY66_06200 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NHY66_06200 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NHY66_06220 PF01138 3' exoribonuclease family, domain 1 NHY66_06220 PF03725 3' exoribonuclease family, domain 2 NHY66_06225 PF00487 Fatty acid desaturase NHY66_06235 PF00440 Bacterial regulatory proteins, tetR family NHY66_06240 PF08360 QacR-like protein, C-terminal region NHY66_06240 PF00440 Bacterial regulatory proteins, tetR family NHY66_06245 PF01323 DSBA-like thioredoxin domain NHY66_06260 PF00106 short chain dehydrogenase NHY66_06280 PF09084 NMT1/THI5 like NHY66_06285 PF09084 NMT1/THI5 like NHY66_06290 PF00296 Luciferase-like monooxygenase NHY66_06295 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_06300 PF00005 ABC transporter NHY66_06305 PF00440 Bacterial regulatory proteins, tetR family NHY66_06305 PF08362 YcdC-like protein, C-terminal region NHY66_06310 PF01048 Phosphorylase superfamily NHY66_06320 PF01687 Riboflavin kinase NHY66_06320 PF06574 FAD synthetase NHY66_06325 PF06827 Zinc finger found in FPG and IleRS NHY66_06325 PF00133 tRNA synthetases class I (I, L, M and V) NHY66_06325 PF08264 Anticodon-binding domain of tRNA NHY66_06330 PF01252 Signal peptidase (SPase) II NHY66_06335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY66_06375 PF00579 tRNA synthetases class I (W and Y) NHY66_06380 PF03702 Anhydro-N-acetylmuramic acid kinase NHY66_06385 PF00561 alpha/beta hydrolase fold NHY66_06390 PF01521 Iron-sulphur cluster biosynthesis NHY66_06410 PF12848 ABC transporter NHY66_06410 PF00005 ABC transporter NHY66_06430 PF02463 RecF/RecN/SMC N terminal domain NHY66_06440 PF11638 DnaA N-terminal domain NHY66_06440 PF00308 Bacterial dnaA protein NHY66_06440 PF08299 Bacterial dnaA protein helix-turn-helix NHY66_06445 PF00468 Ribosomal protein L34 NHY66_06450 PF00825 Ribonuclease P NHY66_06455 PF01809 Putative membrane protein insertion efficiency factor NHY66_06470 PF02583 Metal-sensitive transcriptional repressor NHY66_06475 PF01545 Cation efflux family NHY66_06475 PF16916 Dimerisation domain of Zinc Transporter NHY66_06480 PF10411 Disulfide bond isomerase protein N-terminus NHY66_06480 PF13098 Thioredoxin-like domain NHY66_06490 PF00156 Phosphoribosyl transferase domain NHY66_06495 PF01979 Amidohydrolase family NHY66_06500 PF00355 Rieske [2Fe-2S] domain NHY66_06505 PF03738 Glutathionylspermidine synthase preATP-grasp NHY66_06515 PF03741 Integral membrane protein TerC family NHY66_06530 PF01225 Mur ligase family, catalytic domain NHY66_06530 PF02875 Mur ligase family, glutamate ligase domain NHY66_06530 PF08245 Mur ligase middle domain NHY66_06540 PF00731 AIR carboxylase NHY66_06550 PF13406 Transglycosylase SLT domain NHY66_06575 PF01025 GrpE NHY66_06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_06580 PF03466 LysR substrate binding domain NHY66_06600 PF07859 alpha/beta hydrolase fold NHY66_06605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY66_06645 PF00209 Sodium:neurotransmitter symporter family NHY66_06655 PF01189 16S rRNA methyltransferase RsmB/F NHY66_06655 PF01029 NusB family NHY66_06660 PF02911 Formyl transferase, C-terminal domain NHY66_06660 PF00551 Formyl transferase NHY66_06685 PF00860 Permease family NHY66_06695 PF08361 MAATS-type transcriptional repressor, C-terminal region NHY66_06695 PF00440 Bacterial regulatory proteins, tetR family NHY66_06700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY66_06705 PF00873 AcrB/AcrD/AcrF family NHY66_06715 PF00226 DnaJ domain NHY66_06715 PF01556 DnaJ C terminal domain NHY66_06715 PF00684 DnaJ central domain NHY66_06725 PF05173 Dihydrodipicolinate reductase, C-terminus NHY66_06725 PF01113 Dihydrodipicolinate reductase, N-terminus NHY66_06735 PF07690 Major Facilitator Superfamily NHY66_06760 PF00392 Bacterial regulatory proteins, gntR family NHY66_06760 PF00155 Aminotransferase class I and II NHY66_06765 PF00107 Zinc-binding dehydrogenase NHY66_06765 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_06770 PF03352 Methyladenine glycosylase NHY66_06800 PF07043 Protein of unknown function (DUF1328) NHY66_06805 PF03692 Putative zinc- or iron-chelating domain NHY66_06815 PF00004 ATPase family associated with various cellular activities (AAA) NHY66_06815 PF16193 AAA C-terminal domain NHY66_06815 PF12002 MgsA AAA+ ATPase C terminal NHY66_06820 PF01226 Formate/nitrite transporter NHY66_06840 PF00701 Dihydrodipicolinate synthetase family NHY66_06845 PF00857 Isochorismatase family NHY66_06855 PF01554 MatE NHY66_06865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY66_06875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY66_06890 PF00324 Amino acid permease NHY66_06900 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY66_06900 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY66_06915 PF05962 HutD NHY66_06920 PF17391 Urocanase N-terminal domain NHY66_06920 PF17392 Urocanase C-terminal domain NHY66_06920 PF01175 Urocanase Rossmann-like domain NHY66_06925 PF00221 Aromatic amino acid lyase NHY66_06930 PF00324 Amino acid permease NHY66_06935 PF01979 Amidohydrolase family NHY66_06940 PF00491 Arginase family NHY66_06955 PF01177 Asp/Glu/Hydantoin racemase NHY66_06960 PF01380 SIS domain NHY66_06965 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_06965 PF14602 Hexapeptide repeat of succinyl-transferase NHY66_06965 PF12804 MobA-like NTP transferase domain NHY66_06970 PF04608 Phosphatidylglycerophosphatase A NHY66_06975 PF00586 AIR synthase related protein, N-terminal domain NHY66_06975 PF02769 AIR synthase related protein, C-terminal domain NHY66_06980 PF01029 NusB family NHY66_06985 PF00885 6,7-dimethyl-8-ribityllumazine synthase NHY66_06990 PF00925 GTP cyclohydrolase II NHY66_06990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY66_07015 PF02580 D-Tyr-tRNA(Tyr) deacylase NHY66_07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_07055 PF00512 His Kinase A (phospho-acceptor) domain NHY66_07055 PF00989 PAS fold NHY66_07055 PF11808 Phosphate regulon sensor protein PhoR NHY66_07060 PF00072 Response regulator receiver domain NHY66_07060 PF00486 Transcriptional regulatory protein, C terminal NHY66_07070 PF00106 short chain dehydrogenase NHY66_07075 PF01554 MatE NHY66_07080 PF00155 Aminotransferase class I and II NHY66_07100 PF04262 Glutamate-cysteine ligase NHY66_07105 PF02600 Disulfide bond formation protein DsbB NHY66_07110 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY66_07110 PF04717 Type VI secretion system, phage-baseplate injector NHY66_07110 PF13296 Putative type VI secretion system Rhs element Vgr NHY66_07130 PF05728 Uncharacterised protein family (UPF0227) NHY66_07135 PF00986 DNA gyrase B subunit, carboxyl terminus NHY66_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_07135 PF00204 DNA gyrase B NHY66_07135 PF01751 Toprim domain NHY66_07140 PF00106 short chain dehydrogenase NHY66_07145 PF04115 Ureidoglycolate lyase NHY66_07150 PF03561 Allantoicase repeat NHY66_07170 PF00576 HIUase/Transthyretin family NHY66_07200 PF11412 Disulphide bond corrector protein DsbC NHY66_07200 PF02683 Cytochrome C biogenesis protein transmembrane region NHY66_07205 PF07694 5TMR of 5TMR-LYT NHY66_07205 PF00990 Diguanylate cyclase, GGDEF domain NHY66_07210 PF07859 alpha/beta hydrolase fold NHY66_07220 PF03960 ArsC family NHY66_07225 PF03372 Endonuclease/Exonuclease/phosphatase family NHY66_07230 PF00156 Phosphoribosyl transferase domain NHY66_07235 PF07715 TonB-dependent Receptor Plug Domain NHY66_07235 PF00593 TonB dependent receptor NHY66_07245 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NHY66_07245 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NHY66_07250 PF04101 Glycosyltransferase family 28 C-terminal domain NHY66_07250 PF03033 Glycosyltransferase family 28 N-terminal domain NHY66_07255 PF01225 Mur ligase family, catalytic domain NHY66_07255 PF02875 Mur ligase family, glutamate ligase domain NHY66_07255 PF08245 Mur ligase middle domain NHY66_07260 PF07478 D-ala D-ala ligase C-terminus NHY66_07260 PF01820 D-ala D-ala ligase N-terminus NHY66_07265 PF08478 POTRA domain, FtsQ-type NHY66_07265 PF03799 Cell division protein FtsQ NHY66_07270 PF02491 SHS2 domain inserted in FTSA NHY66_07275 PF12327 FtsZ family, C-terminal domain NHY66_07275 PF00091 Tubulin/FtsZ family, GTPase domain NHY66_07290 PF01551 Peptidase family M23 NHY66_07300 PF00364 Biotin-requiring enzyme NHY66_07300 PF02817 e3 binding domain NHY66_07300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY66_07310 PF01169 Uncharacterized protein family UPF0016 NHY66_07330 PF00258 Flavodoxin NHY66_07330 PF01613 Flavin reductase like domain NHY66_07335 PF03692 Putative zinc- or iron-chelating domain NHY66_07345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY66_07345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY66_07345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY66_07345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY66_07350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NHY66_07350 PF01243 Pyridoxamine 5'-phosphate oxidase NHY66_07375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY66_07380 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NHY66_07385 PF04452 RNA methyltransferase NHY66_07390 PF00924 Mechanosensitive ion channel NHY66_07405 PF00857 Isochorismatase family NHY66_07410 PF01037 Lrp/AsnC ligand binding domain NHY66_07415 PF00872 Transposase, Mutator family NHY66_07425 PF03358 NADPH-dependent FMN reductase NHY66_07430 PF00072 Response regulator receiver domain NHY66_07430 PF00196 Bacterial regulatory proteins, luxR family NHY66_07445 PF04341 Protein of unknown function, DUF485 NHY66_07460 PF02028 BCCT, betaine/carnitine/choline family transporter NHY66_07470 PF00990 Diguanylate cyclase, GGDEF domain NHY66_07480 PF00005 ABC transporter NHY66_07480 PF17755 UvrA DNA-binding domain NHY66_07480 PF17760 UvrA interaction domain NHY66_07485 PF16925 Tetracyclin repressor-like, C-terminal domain NHY66_07485 PF00440 Bacterial regulatory proteins, tetR family NHY66_07490 PF00107 Zinc-binding dehydrogenase NHY66_07490 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_07505 PF03070 TENA/THI-4/PQQC family NHY66_07505 PF02581 Thiamine monophosphate synthase NHY66_07505 PF08543 Phosphomethylpyrimidine kinase NHY66_07515 PF07690 Major Facilitator Superfamily NHY66_07520 PF00436 Single-strand binding protein family NHY66_07530 PF03591 AzlC protein NHY66_07540 PF00324 Amino acid permease NHY66_07545 PF00155 Aminotransferase class I and II NHY66_07545 PF00392 Bacterial regulatory proteins, gntR family NHY66_07550 PF00202 Aminotransferase class-III NHY66_07555 PF00171 Aldehyde dehydrogenase family NHY66_07565 PF00857 Isochorismatase family NHY66_07570 PF05726 Pirin C-terminal cupin domain NHY66_07570 PF02678 Pirin NHY66_07595 PF07690 Major Facilitator Superfamily NHY66_07620 PF00248 Aldo/keto reductase family NHY66_07655 PF01638 HxlR-like helix-turn-helix NHY66_07660 PF02525 Flavodoxin-like fold NHY66_07705 PF00230 Major intrinsic protein NHY66_07720 PF00977 Histidine biosynthesis protein NHY66_07725 PF01636 Phosphotransferase enzyme family NHY66_07740 PF03992 Antibiotic biosynthesis monooxygenase NHY66_07755 PF00977 Histidine biosynthesis protein NHY66_07770 PF00117 Glutamine amidotransferase class-I NHY66_07775 PF00475 Imidazoleglycerol-phosphate dehydratase NHY66_07795 PF00583 Acetyltransferase (GNAT) family NHY66_07800 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NHY66_07800 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NHY66_07815 PF00072 Response regulator receiver domain NHY66_07815 PF00486 Transcriptional regulatory protein, C terminal NHY66_07820 PF17674 HHH domain NHY66_07820 PF00575 S1 RNA binding domain NHY66_07820 PF09371 Tex-like protein N-terminal domain NHY66_07820 PF16921 Tex protein YqgF-like domain NHY66_07830 PF00106 short chain dehydrogenase NHY66_07865 PF04191 Phospholipid methyltransferase NHY66_07885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY66_07885 PF00529 HlyD membrane-fusion protein of T1SS NHY66_07890 PF00873 AcrB/AcrD/AcrF family NHY66_07895 PF01545 Cation efflux family NHY66_07955 PF01795 MraW methylase family NHY66_07965 PF03717 Penicillin-binding Protein dimerisation domain NHY66_07965 PF00905 Penicillin binding protein transpeptidase domain NHY66_07970 PF02875 Mur ligase family, glutamate ligase domain NHY66_07970 PF08245 Mur ligase middle domain NHY66_07970 PF01225 Mur ligase family, catalytic domain NHY66_07975 PF01225 Mur ligase family, catalytic domain NHY66_07975 PF02875 Mur ligase family, glutamate ligase domain NHY66_07975 PF08245 Mur ligase middle domain NHY66_07980 PF00953 Glycosyl transferase family 4 NHY66_07990 PF13847 Methyltransferase domain NHY66_08000 PF11104 Type IV pilus assembly protein PilM; NHY66_08005 PF05137 Fimbrial assembly protein (PilN) NHY66_08010 PF04350 Pilus assembly protein, PilO NHY66_08020 PF11741 AMIN domain NHY66_08020 PF03958 Bacterial type II/III secretion system short domain NHY66_08020 PF07660 Secretin and TonB N terminus short domain NHY66_08020 PF00263 Bacterial type II and III secretion system protein NHY66_08025 PF01202 Shikimate kinase NHY66_08030 PF01761 3-dehydroquinate synthase NHY66_08040 PF01645 Conserved region in glutamate synthase NHY66_08040 PF00310 Glutamine amidotransferases class-II NHY66_08040 PF04898 Glutamate synthase central domain NHY66_08040 PF01493 GXGXG motif NHY66_08045 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_08045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NHY66_08055 PF04011 LemA family NHY66_08060 PF04536 TPM domain NHY66_08070 PF00114 Pilin (bacterial filament) NHY66_08070 PF07963 Prokaryotic N-terminal methylation motif NHY66_08090 PF04324 BFD-like [2Fe-2S] binding domain NHY66_08095 PF01042 Endoribonuclease L-PSP NHY66_08100 PF13291 ACT domain NHY66_08100 PF04607 Region found in RelA / SpoT proteins NHY66_08100 PF02824 TGS domain NHY66_08110 PF01192 RNA polymerase Rpb6 NHY66_08160 PF00886 Ribosomal protein S16 NHY66_08170 PF01746 tRNA (Guanine-1)-methyltransferase NHY66_08175 PF01245 Ribosomal protein L19 NHY66_08180 PF00561 alpha/beta hydrolase fold NHY66_08185 PF03280 Proteobacterial lipase chaperone protein NHY66_08190 PF01509 TruB family pseudouridylate synthase (N terminal domain) NHY66_08190 PF09157 Pseudouridine synthase II TruB, C-terminal NHY66_08190 PF16198 tRNA pseudouridylate synthase B C-terminal domain NHY66_08195 PF01925 Sulfite exporter TauE/SafE NHY66_08205 PF00892 EamA-like transporter family NHY66_08215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY66_08215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY66_08220 PF01565 FAD binding domain NHY66_08220 PF02913 FAD linked oxidases, C-terminal domain NHY66_08230 PF03992 Antibiotic biosynthesis monooxygenase NHY66_08235 PF02525 Flavodoxin-like fold NHY66_08245 PF07690 Major Facilitator Superfamily NHY66_08250 PF12805 FUSC-like inner membrane protein yccS NHY66_08255 PF00080 Copper/zinc superoxide dismutase (SODC) NHY66_08265 PF13614 AAA domain NHY66_08295 PF00324 Amino acid permease NHY66_08305 PF00202 Aminotransferase class-III NHY66_08310 PF04958 Arginine N-succinyltransferase beta subunit NHY66_08315 PF00171 Aldehyde dehydrogenase family NHY66_08320 PF04996 Succinylarginine dihydrolase NHY66_08355 PF03466 LysR substrate binding domain NHY66_08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_08360 PF00892 EamA-like transporter family NHY66_08375 PF02091 Glycyl-tRNA synthetase alpha subunit NHY66_08400 PF00571 CBS domain NHY66_08405 PF04024 PspC domain NHY66_08415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_08415 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY66_08415 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_08415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_08425 PF08501 Shikimate dehydrogenase substrate binding domain NHY66_08425 PF01488 Shikimate / quinate 5-dehydrogenase NHY66_08425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NHY66_08430 PF01218 Coproporphyrinogen III oxidase NHY66_08435 PF00925 GTP cyclohydrolase II NHY66_08440 PF02780 Transketolase, C-terminal domain NHY66_08440 PF02779 Transketolase, pyrimidine binding domain NHY66_08440 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NHY66_08445 PF00459 Inositol monophosphatase family NHY66_08450 PF12343 Cold shock protein DEAD box A NHY66_08450 PF03880 DbpA RNA binding domain NHY66_08450 PF00270 DEAD/DEAH box helicase NHY66_08450 PF00271 Helicase conserved C-terminal domain NHY66_08465 PF02405 Permease MlaE NHY66_08475 PF05494 MlaC protein NHY66_08490 PF03641 Possible lysine decarboxylase NHY66_08500 PF00156 Phosphoribosyl transferase domain NHY66_08520 PF01553 Acyltransferase NHY66_08530 PF00375 Sodium:dicarboxylate symporter family NHY66_08540 PF01926 50S ribosome-binding GTPase NHY66_08545 PF02082 Transcriptional regulator NHY66_08550 PF00970 Oxidoreductase FAD-binding domain NHY66_08550 PF00175 Oxidoreductase NAD-binding domain NHY66_08550 PF00042 Globin NHY66_08560 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY66_08565 PF00117 Glutamine amidotransferase class-I NHY66_08570 PF00338 Ribosomal protein S10p/S20e NHY66_08575 PF00297 Ribosomal protein L3 NHY66_08580 PF00573 Ribosomal protein L4/L1 family NHY66_08585 PF00276 Ribosomal protein L23 NHY66_08590 PF00181 Ribosomal Proteins L2, RNA binding domain NHY66_08590 PF03947 Ribosomal Proteins L2, C-terminal domain NHY66_08595 PF00203 Ribosomal protein S19 NHY66_08615 PF00831 Ribosomal L29 protein NHY66_08620 PF00366 Ribosomal protein S17 NHY66_08625 PF00238 Ribosomal protein L14p/L23e NHY66_08630 PF00467 KOW motif NHY66_08630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NHY66_08635 PF00281 Ribosomal protein L5 NHY66_08635 PF00673 ribosomal L5P family C-terminus NHY66_08640 PF00253 Ribosomal protein S14p/S29e NHY66_08650 PF00347 Ribosomal protein L6 NHY66_08655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NHY66_08660 PF03719 Ribosomal protein S5, C-terminal domain NHY66_08660 PF00333 Ribosomal protein S5, N-terminal domain NHY66_08665 PF00327 Ribosomal protein L30p/L7e NHY66_08670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NHY66_08675 PF00344 SecY translocase NHY66_08680 PF00444 Ribosomal protein L36 NHY66_08690 PF00411 Ribosomal protein S11 NHY66_08695 PF00163 Ribosomal protein S4/S9 N-terminal domain NHY66_08695 PF01479 S4 domain NHY66_08700 PF01000 RNA polymerase Rpb3/RpoA insert domain NHY66_08700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NHY66_08700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NHY66_08705 PF01196 Ribosomal protein L17 NHY66_08715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_08715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_08715 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_08750 PF09526 Probable metal-binding protein (DUF2387) NHY66_08755 PF01432 Peptidase family M3 NHY66_08805 PF01557 Fumarylacetoacetate (FAA) hydrolase family NHY66_08810 PF12833 Helix-turn-helix domain NHY66_08815 PF00892 EamA-like transporter family NHY66_08820 PF03631 Virulence factor BrkB NHY66_08825 PF03358 NADPH-dependent FMN reductase NHY66_08850 PF02130 Uncharacterized protein family UPF0054 NHY66_08860 PF00919 Uncharacterized protein family UPF0004 NHY66_08860 PF04055 Radical SAM superfamily NHY66_08860 PF01938 TRAM domain NHY66_08865 PF01551 Peptidase family M23 NHY66_08865 PF10145 Phage-related minor tail protein NHY66_08865 PF01464 Transglycosylase SLT domain NHY66_08875 PF00056 lactate/malate dehydrogenase, NAD binding domain NHY66_08875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NHY66_08895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NHY66_08900 PF01066 CDP-alcohol phosphatidyltransferase NHY66_08965 PF01039 Carboxyl transferase domain NHY66_08970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_08970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_08970 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_08980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY66_08980 PF00364 Biotin-requiring enzyme NHY66_08980 PF00289 Biotin carboxylase, N-terminal domain NHY66_08980 PF02785 Biotin carboxylase C-terminal domain NHY66_08990 PF04386 Stringent starvation protein B NHY66_08995 PF00043 Glutathione S-transferase, C-terminal domain NHY66_08995 PF13417 Glutathione S-transferase, N-terminal domain NHY66_09000 PF00380 Ribosomal protein S9/S16 NHY66_09005 PF00572 Ribosomal protein L13 NHY66_09010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NHY66_09015 PF00398 Ribosomal RNA adenine dimethylase NHY66_09020 PF00149 Calcineurin-like phosphoesterase NHY66_09040 PF16360 GTP-binding GTPase Middle Region NHY66_09040 PF13167 GTP-binding GTPase N-terminal NHY66_09040 PF01926 50S ribosome-binding GTPase NHY66_09055 PF00149 Calcineurin-like phosphoesterase NHY66_09055 PF10518 TAT (twin-arginine translocation) pathway signal sequence NHY66_09060 PF01389 OmpA-like transmembrane domain NHY66_09060 PF00691 OmpA family NHY66_09100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY66_09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_09110 PF00753 Metallo-beta-lactamase superfamily NHY66_09110 PF04273 Putative phosphatase (DUF442) NHY66_09115 PF00561 alpha/beta hydrolase fold NHY66_09125 PF03061 Thioesterase superfamily NHY66_09145 PF01266 FAD dependent oxidoreductase NHY66_09145 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NHY66_09155 PF03795 YCII-related domain NHY66_09165 PF02811 PHP domain NHY66_09170 PF01062 Bestrophin, RFP-TM, chloride channel NHY66_09175 PF04002 RadC-like JAB domain NHY66_09185 PF07549 SecD/SecF GG Motif NHY66_09185 PF02355 Protein export membrane protein NHY66_09190 PF02355 Protein export membrane protein NHY66_09190 PF13721 SecD export protein N-terminal TM region NHY66_09190 PF07549 SecD/SecF GG Motif NHY66_09195 PF02699 Preprotein translocase subunit NHY66_09215 PF02547 Queuosine biosynthesis protein NHY66_09245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_09245 PF00512 His Kinase A (phospho-acceptor) domain NHY66_09245 PF07689 KaiB domain NHY66_09250 PF08335 GlnD PII-uridylyltransferase NHY66_09250 PF03710 Glutamate-ammonia ligase adenylyltransferase NHY66_09255 PF01063 Amino-transferase class IV NHY66_09270 PF01522 Polysaccharide deacetylase NHY66_09275 PF00535 Glycosyl transferase family 2 NHY66_09305 PF17102 Stealth protein CR3, conserved region 3 NHY66_09305 PF17101 Stealth protein CR1, conserved region 1 NHY66_09305 PF11380 Stealth protein CR2, conserved region 2 NHY66_09310 PF00152 tRNA synthetases class II (D, K and N) NHY66_09310 PF01336 OB-fold nucleic acid binding domain NHY66_09310 PF02938 GAD domain NHY66_09340 PF06146 Phosphate-starvation-inducible E NHY66_09345 PF00043 Glutathione S-transferase, C-terminal domain NHY66_09345 PF02798 Glutathione S-transferase, N-terminal domain NHY66_09350 PF03466 LysR substrate binding domain NHY66_09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_09360 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_09360 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY66_09360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_09360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_09370 PF00672 HAMP domain NHY66_09370 PF00512 His Kinase A (phospho-acceptor) domain NHY66_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_09400 PF01923 Cobalamin adenosyltransferase NHY66_09410 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NHY66_09415 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_09440 PF00290 Tryptophan synthase alpha chain NHY66_09445 PF01039 Carboxyl transferase domain NHY66_09450 PF02875 Mur ligase family, glutamate ligase domain NHY66_09450 PF08245 Mur ligase middle domain NHY66_09470 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY66_09470 PF00578 AhpC/TSA family NHY66_09475 PF02810 SEC-C motif NHY66_09475 PF07517 SecA DEAD-like domain NHY66_09475 PF01043 SecA preprotein cross-linking domain NHY66_09475 PF07516 SecA Wing and Scaffold domain NHY66_09485 PF00083 Sugar (and other) transporter NHY66_09485 PF07690 Major Facilitator Superfamily NHY66_09520 PF02803 Thiolase, C-terminal domain NHY66_09520 PF00108 Thiolase, N-terminal domain NHY66_09525 PF12833 Helix-turn-helix domain NHY66_09525 PF02311 AraC-like ligand binding domain NHY66_09530 PF02515 CoA-transferase family III NHY66_09535 PF04966 Carbohydrate-selective porin, OprB family NHY66_09555 PF00893 Small Multidrug Resistance protein NHY66_09565 PF02803 Thiolase, C-terminal domain NHY66_09565 PF00108 Thiolase, N-terminal domain NHY66_09595 PF08468 Methyltransferase small domain N-terminal NHY66_09595 PF05175 Methyltransferase small domain NHY66_09600 PF00860 Permease family NHY66_09610 PF01741 Large-conductance mechanosensitive channel, MscL NHY66_09630 PF02245 Methylpurine-DNA glycosylase (MPG) NHY66_09655 PF03547 Membrane transport protein NHY66_09665 PF13098 Thioredoxin-like domain NHY66_09665 PF10411 Disulfide bond isomerase protein N-terminus NHY66_09670 PF01571 Aminomethyltransferase folate-binding domain NHY66_09680 PF04343 Protein of unknown function, DUF488 NHY66_09685 PF03831 PhnA domain NHY66_09685 PF08274 PhnA Zinc-Ribbon NHY66_09690 PF07411 Domain of unknown function (DUF1508) NHY66_09715 PF00072 Response regulator receiver domain NHY66_09720 PF00072 Response regulator receiver domain NHY66_09725 PF01584 CheW-like domain NHY66_09735 PF01584 CheW-like domain NHY66_09735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_09735 PF01627 Hpt domain NHY66_09735 PF00072 Response regulator receiver domain NHY66_09745 PF07687 Peptidase dimerisation domain NHY66_09745 PF01546 Peptidase family M20/M25/M40 NHY66_09750 PF08085 Entericidin EcnA/B family NHY66_09760 PF04304 Protein of unknown function (DUF454) NHY66_09765 PF17969 L,D-transpeptidase C-terminal domain NHY66_09765 PF03734 L,D-transpeptidase catalytic domain NHY66_09815 PF12805 FUSC-like inner membrane protein yccS NHY66_09820 PF07690 Major Facilitator Superfamily NHY66_09840 PF01235 Sodium:alanine symporter family NHY66_09845 PF01734 Patatin-like phospholipase NHY66_09850 PF13291 ACT domain NHY66_09850 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_09855 PF05992 SbmA/BacA-like family NHY66_09885 PF02934 GatB/GatE catalytic domain NHY66_09885 PF02637 GatB domain NHY66_09890 PF01425 Amidase NHY66_09895 PF02686 Glu-tRNAGln amidotransferase C subunit NHY66_09905 PF04085 rod shape-determining protein MreC NHY66_09915 PF02545 Maf-like protein NHY66_09920 PF10150 Ribonuclease E/G family NHY66_09920 PF00575 S1 RNA binding domain NHY66_09930 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NHY66_09930 PF06974 Protein of unknown function (DUF1298) NHY66_09935 PF01507 Phosphoadenosine phosphosulfate reductase family NHY66_09970 PF02673 Bacitracin resistance protein BacA NHY66_09975 PF06719 AraC-type transcriptional regulator N-terminus NHY66_09975 PF12833 Helix-turn-helix domain NHY66_09980 PF00550 Phosphopantetheine attachment site NHY66_09980 PF08659 KR domain NHY66_09980 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY66_09980 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY66_09980 PF16197 Ketoacyl-synthetase C-terminal extension NHY66_09980 PF09277 Erythronolide synthase, docking NHY66_09980 PF08990 Erythronolide synthase docking NHY66_09980 PF14765 Polyketide synthase dehydratase NHY66_09980 PF00698 Acyl transferase domain NHY66_09980 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_09985 PF01965 DJ-1/PfpI family NHY66_09995 PF00324 Amino acid permease NHY66_10000 PF04303 PrpF protein NHY66_10005 PF00348 Polyprenyl synthetase NHY66_10010 PF04237 YjbR NHY66_10015 PF01145 SPFH domain / Band 7 family NHY66_10025 PF01734 Patatin-like phospholipase NHY66_10065 PF00909 Ammonium Transporter Family NHY66_10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_10070 PF03466 LysR substrate binding domain NHY66_10110 PF01906 Putative heavy-metal-binding NHY66_10115 PF01906 Putative heavy-metal-binding NHY66_10130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY66_10130 PF00529 HlyD membrane-fusion protein of T1SS NHY66_10135 PF01569 PAP2 superfamily NHY66_10145 PF00348 Polyprenyl synthetase NHY66_10155 PF00829 Ribosomal prokaryotic L21 protein NHY66_10160 PF01016 Ribosomal L27 protein NHY66_10165 PF03548 Outer membrane lipoprotein carrier protein LolA NHY66_10185 PF00588 SpoU rRNA Methylase family NHY66_10190 PF01638 HxlR-like helix-turn-helix NHY66_10195 PF03358 NADPH-dependent FMN reductase NHY66_10200 PF13520 Amino acid permease NHY66_10205 PF00465 Iron-containing alcohol dehydrogenase NHY66_10215 PF03099 Biotin/lipoate A/B protein ligase family NHY66_10220 PF04359 Protein of unknown function (DUF493) NHY66_10245 PF17773 UPF0176 acylphosphatase like domain NHY66_10245 PF00581 Rhodanese-like domain NHY66_10260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY66_10265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY66_10275 PF13085 2Fe-2S iron-sulfur cluster binding domain NHY66_10290 PF02779 Transketolase, pyrimidine binding domain NHY66_10290 PF16870 2-oxoglutarate dehydrogenase C-terminal NHY66_10290 PF16078 2-oxoglutarate dehydrogenase N-terminus NHY66_10290 PF00676 Dehydrogenase E1 component NHY66_10295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY66_10295 PF00364 Biotin-requiring enzyme NHY66_10295 PF02817 e3 binding domain NHY66_10300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY66_10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_10305 PF00549 CoA-ligase NHY66_10305 PF08442 ATP-grasp domain NHY66_10310 PF02629 CoA binding domain NHY66_10310 PF00549 CoA-ligase NHY66_10320 PF05661 Protein of unknown function (DUF808) NHY66_10325 PF04228 Putative neutral zinc metallopeptidase NHY66_10330 PF00999 Sodium/hydrogen exchanger family NHY66_10355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY66_10360 PF00582 Universal stress protein family NHY66_10365 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_10370 PF03449 Transcription elongation factor, N-terminal NHY66_10370 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY66_10380 PF00117 Glutamine amidotransferase class-I NHY66_10380 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NHY66_10400 PF01728 FtsJ-like methyltransferase NHY66_10405 PF17862 AAA+ lid domain NHY66_10405 PF00004 ATPase family associated with various cellular activities (AAA) NHY66_10405 PF06480 FtsH Extracellular NHY66_10405 PF01434 Peptidase family M41 NHY66_10410 PF00809 Pterin binding enzyme NHY66_10430 PF09423 PhoD-like phosphatase NHY66_10430 PF16655 PhoD-like phosphatase, N-terminal domain NHY66_10445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NHY66_10445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NHY66_10460 PF00083 Sugar (and other) transporter NHY66_10465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NHY66_10465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NHY66_10470 PF01266 FAD dependent oxidoreductase NHY66_10470 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NHY66_10480 PF00781 Diacylglycerol kinase catalytic domain NHY66_10485 PF00149 Calcineurin-like phosphoesterase NHY66_10495 PF00166 Chaperonin 10 Kd subunit NHY66_10500 PF00118 TCP-1/cpn60 chaperonin family NHY66_10505 PF01219 Prokaryotic diacylglycerol kinase NHY66_10510 PF00753 Metallo-beta-lactamase superfamily NHY66_10540 PF01171 PP-loop family NHY66_10550 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY66_10550 PF01464 Transglycosylase SLT domain NHY66_10555 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY66_10555 PF03449 Transcription elongation factor, N-terminal NHY66_10570 PF00668 Condensation domain NHY66_10570 PF00501 AMP-binding enzyme NHY66_10570 PF13193 AMP-binding enzyme C-terminal domain NHY66_10570 PF00975 Thioesterase domain NHY66_10570 PF00550 Phosphopantetheine attachment site NHY66_10595 PF00881 Nitroreductase family NHY66_10620 PF02634 FdhD/NarQ family NHY66_10625 PF06803 Protein of unknown function (DUF1232) NHY66_10630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY66_10630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY66_10630 PF11890 Domain of unknown function (DUF3410) NHY66_10635 PF00152 tRNA synthetases class II (D, K and N) NHY66_10650 PF00324 Amino acid permease NHY66_10660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NHY66_10660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NHY66_10670 PF01810 LysE type translocator NHY66_10675 PF00589 Phage integrase family NHY66_10675 PF02899 Phage integrase, N-terminal SAM-like domain NHY66_10680 PF01012 Electron transfer flavoprotein domain NHY66_10685 PF00766 Electron transfer flavoprotein FAD-binding domain NHY66_10685 PF01012 Electron transfer flavoprotein domain NHY66_10705 PF00535 Glycosyl transferase family 2 NHY66_10725 PF13533 Biotin-lipoyl like NHY66_10735 PF00266 Aminotransferase class-V NHY66_10750 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NHY66_10760 PF02687 FtsX-like permease family NHY66_10760 PF12704 MacB-like periplasmic core domain NHY66_10765 PF00005 ABC transporter NHY66_10780 PF01343 Peptidase family S49 NHY66_10780 PF06965 Na+/H+ antiporter 1 NHY66_10790 PF00551 Formyl transferase NHY66_10795 PF02769 AIR synthase related protein, C-terminal domain NHY66_10795 PF00586 AIR synthase related protein, N-terminal domain NHY66_10800 PF01594 AI-2E family transporter NHY66_10805 PF00308 Bacterial dnaA protein NHY66_10805 PF08299 Bacterial dnaA protein helix-turn-helix NHY66_10805 PF11638 DnaA N-terminal domain NHY66_10835 PF00588 SpoU rRNA Methylase family NHY66_10835 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY66_10840 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NHY66_10850 PF00691 OmpA family NHY66_10855 PF04052 TolB amino-terminal domain NHY66_10855 PF07676 WD40-like Beta Propeller Repeat NHY66_10865 PF02472 Biopolymer transport protein ExbD/TolR NHY66_10870 PF01618 MotA/TolQ/ExbB proton channel family NHY66_10880 PF07687 Peptidase dimerisation domain NHY66_10880 PF01546 Peptidase family M20/M25/M40 NHY66_10885 PF17864 RuvB AAA lid domain NHY66_10885 PF05491 RuvB C-terminal winged helix domain NHY66_10885 PF05496 Holliday junction DNA helicase RuvB P-loop domain NHY66_10895 PF01966 HD domain NHY66_10905 PF07690 Major Facilitator Superfamily NHY66_10915 PF01784 NIF3 (NGG1p interacting factor 3) NHY66_10920 PF00378 Enoyl-CoA hydratase/isomerase NHY66_10925 PF01467 Cytidylyltransferase-like NHY66_10925 PF00293 NUDIX domain NHY66_10935 PF00578 AhpC/TSA family NHY66_10950 PF06508 Queuosine biosynthesis protein QueC NHY66_10970 PF03466 LysR substrate binding domain NHY66_10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_10980 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_10985 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_11000 PF01063 Amino-transferase class IV NHY66_11005 PF02618 YceG-like family NHY66_11020 PF02910 Fumarate reductase flavoprotein C-term NHY66_11020 PF00890 FAD binding domain NHY66_11025 PF13180 PDZ domain NHY66_11035 PF03144 Elongation factor Tu domain 2 NHY66_11035 PF00679 Elongation factor G C-terminus NHY66_11035 PF00009 Elongation factor Tu GTP binding domain NHY66_11035 PF06421 GTP-binding protein LepA C-terminus NHY66_11040 PF10502 Signal peptidase, peptidase S26 NHY66_11050 PF00035 Double-stranded RNA binding motif NHY66_11050 PF14622 Ribonuclease-III-like NHY66_11065 PF11967 Recombination protein O N terminal NHY66_11065 PF02565 Recombination protein O C terminal NHY66_11070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NHY66_11075 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NHY66_11080 PF00106 short chain dehydrogenase NHY66_11110 PF00155 Aminotransferase class I and II NHY66_11120 PF17151 Periplasmic sensor domain NHY66_11120 PF00990 Diguanylate cyclase, GGDEF domain NHY66_11130 PF00271 Helicase conserved C-terminal domain NHY66_11130 PF04851 Type III restriction enzyme, res subunit NHY66_11130 PF02151 UvrB/uvrC motif NHY66_11130 PF17757 UvrB interaction domain NHY66_11130 PF12344 Ultra-violet resistance protein B NHY66_11145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY66_11145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY66_11160 PF01018 GTP1/OBG NHY66_11160 PF01926 50S ribosome-binding GTPase NHY66_11175 PF07759 Protein of unknown function (DUF1615) NHY66_11180 PF01207 Dihydrouridine synthase (Dus) NHY66_11185 PF03060 Nitronate monooxygenase NHY66_11200 PF02350 UDP-N-acetylglucosamine 2-epimerase NHY66_11230 PF00875 DNA photolyase NHY66_11230 PF03441 FAD binding domain of DNA photolyase NHY66_11235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY66_11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_11255 PF03971 Monomeric isocitrate dehydrogenase NHY66_11260 PF00849 RNA pseudouridylate synthase NHY66_11265 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY66_11285 PF06779 Uncharacterised MFS-type transporter YbfB NHY66_11290 PF03466 LysR substrate binding domain NHY66_11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_11295 PF00375 Sodium:dicarboxylate symporter family NHY66_11300 PF02567 Phenazine biosynthesis-like protein NHY66_11330 PF02581 Thiamine monophosphate synthase NHY66_11335 PF00202 Aminotransferase class-III NHY66_11345 PF00849 RNA pseudouridylate synthase NHY66_11360 PF00440 Bacterial regulatory proteins, tetR family NHY66_11365 PF00970 Oxidoreductase FAD-binding domain NHY66_11365 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY66_11365 PF00175 Oxidoreductase NAD-binding domain NHY66_11370 PF00487 Fatty acid desaturase NHY66_11380 PF17754 MftR C-terminal domain NHY66_11380 PF00440 Bacterial regulatory proteins, tetR family NHY66_11390 PF00202 Aminotransferase class-III NHY66_11395 PF00282 Pyridoxal-dependent decarboxylase conserved domain NHY66_11405 PF01037 Lrp/AsnC ligand binding domain NHY66_11415 PF00324 Amino acid permease NHY66_11420 PF12849 PBP superfamily domain NHY66_11425 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_11435 PF00005 ABC transporter NHY66_11450 PF08328 Adenylosuccinate lyase C-terminal NHY66_11450 PF00206 Lyase NHY66_11455 PF04356 Protein of unknown function (DUF489) NHY66_11465 PF00293 NUDIX domain NHY66_11465 PF13344 Haloacid dehalogenase-like hydrolase NHY66_11470 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_11475 PF07943 Penicillin-binding protein 5, C-terminal domain NHY66_11475 PF00768 D-alanyl-D-alanine carboxypeptidase NHY66_11490 PF01975 Survival protein SurE NHY66_11495 PF01476 LysM domain NHY66_11495 PF01551 Peptidase family M23 NHY66_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_11500 PF03466 LysR substrate binding domain NHY66_11515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY66_11520 PF13593 SBF-like CPA transporter family (DUF4137) NHY66_11525 PF01197 Ribosomal protein L31 NHY66_11540 PF04055 Radical SAM superfamily NHY66_11550 PF02554 Carbon starvation protein CstA NHY66_11550 PF13722 5TM C-terminal transporter carbon starvation CstA NHY66_11555 PF04328 Selenoprotein, putative NHY66_11590 PF17853 GGDEF-like domain NHY66_11590 PF06018 CodY GAF-like domain NHY66_11590 PF13556 PucR C-terminal helix-turn-helix domain NHY66_11605 PF00171 Aldehyde dehydrogenase family NHY66_11610 PF00324 Amino acid permease NHY66_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_11615 PF03466 LysR substrate binding domain NHY66_11620 PF02028 BCCT, betaine/carnitine/choline family transporter NHY66_11625 PF02028 BCCT, betaine/carnitine/choline family transporter NHY66_11630 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY66_11630 PF00355 Rieske [2Fe-2S] domain NHY66_11635 PF00171 Aldehyde dehydrogenase family NHY66_11645 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_11645 PF18113 Rubredoxin binding C-terminal domain NHY66_11655 PF01266 FAD dependent oxidoreductase NHY66_11655 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NHY66_11675 PF00892 EamA-like transporter family NHY66_11685 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NHY66_11690 PF00083 Sugar (and other) transporter NHY66_11695 PF13378 Enolase C-terminal domain-like NHY66_11695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY66_11700 PF14765 Polyketide synthase dehydratase NHY66_11700 PF00550 Phosphopantetheine attachment site NHY66_11700 PF08659 KR domain NHY66_11700 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY66_11700 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY66_11700 PF16197 Ketoacyl-synthetase C-terminal extension NHY66_11700 PF09277 Erythronolide synthase, docking NHY66_11700 PF08990 Erythronolide synthase docking NHY66_11700 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_11700 PF00698 Acyl transferase domain NHY66_11705 PF00440 Bacterial regulatory proteins, tetR family NHY66_11725 PF17954 Quercetinase C-terminal cupin domain NHY66_11725 PF02678 Pirin NHY66_11735 PF13309 HTH domain NHY66_11735 PF08348 YheO-like PAS domain NHY66_11745 PF00501 AMP-binding enzyme NHY66_11745 PF13193 AMP-binding enzyme C-terminal domain NHY66_11745 PF00668 Condensation domain NHY66_11745 PF00550 Phosphopantetheine attachment site NHY66_11750 PF00668 Condensation domain NHY66_11750 PF13193 AMP-binding enzyme C-terminal domain NHY66_11750 PF00501 AMP-binding enzyme NHY66_11750 PF00975 Thioesterase domain NHY66_11750 PF00550 Phosphopantetheine attachment site NHY66_11755 PF01032 FecCD transport family NHY66_11760 PF01032 FecCD transport family NHY66_11765 PF00005 ABC transporter NHY66_11770 PF01497 Periplasmic binding protein NHY66_11780 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY66_11795 PF00857 Isochorismatase family NHY66_11795 PF00550 Phosphopantetheine attachment site NHY66_11810 PF00005 ABC transporter NHY66_11815 PF00975 Thioesterase domain NHY66_11825 PF00425 chorismate binding enzyme NHY66_11840 PF05675 Protein of unknown function (DUF817) NHY66_11855 PF00144 Beta-lactamase NHY66_11865 PF01227 GTP cyclohydrolase I NHY66_11870 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY66_11870 PF01799 [2Fe-2S] binding domain NHY66_11895 PF00591 Glycosyl transferase family, a/b domain NHY66_11895 PF02885 Glycosyl transferase family, helical bundle domain NHY66_11900 PF00593 TonB dependent receptor NHY66_11900 PF07715 TonB-dependent Receptor Plug Domain NHY66_11905 PF11838 ERAP1-like C-terminal domain NHY66_11905 PF01433 Peptidase family M1 domain NHY66_11910 PF00117 Glutamine amidotransferase class-I NHY66_11920 PF00854 POT family NHY66_11925 PF03951 Glutamine synthetase, beta-Grasp domain NHY66_11925 PF00120 Glutamine synthetase, catalytic domain NHY66_11930 PF04345 Chorismate lyase NHY66_11935 PF01040 UbiA prenyltransferase family NHY66_11970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NHY66_11970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NHY66_11975 PF01784 NIF3 (NGG1p interacting factor 3) NHY66_11980 PF13180 PDZ domain NHY66_12000 PF04452 RNA methyltransferase NHY66_12005 PF02219 Methylenetetrahydrofolate reductase NHY66_12025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_12025 PF09317 Domain of unknown function (DUF1974) NHY66_12025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_12030 PF04055 Radical SAM superfamily NHY66_12055 PF00557 Metallopeptidase family M24 NHY66_12060 PF00318 Ribosomal protein S2 NHY66_12065 PF00889 Elongation factor TS NHY66_12075 PF12833 Helix-turn-helix domain NHY66_12095 PF03330 Lytic transglycolase NHY66_12095 PF05036 Sporulation related domain NHY66_12105 PF01098 Cell cycle protein NHY66_12115 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NHY66_12115 PF14489 QueF-like protein NHY66_12120 PF01061 ABC-2 type transporter NHY66_12125 PF00005 ABC transporter NHY66_12155 PF00464 Serine hydroxymethyltransferase NHY66_12160 PF02321 Outer membrane efflux protein NHY66_12165 PF00873 AcrB/AcrD/AcrF family NHY66_12170 PF13533 Biotin-lipoyl like NHY66_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_12175 PF03466 LysR substrate binding domain NHY66_12180 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY66_12185 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_12190 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_12200 PF00893 Small Multidrug Resistance protein NHY66_12205 PF00037 4Fe-4S binding domain NHY66_12215 PF00392 Bacterial regulatory proteins, gntR family NHY66_12215 PF00155 Aminotransferase class I and II NHY66_12220 PF02567 Phenazine biosynthesis-like protein NHY66_12225 PF00970 Oxidoreductase FAD-binding domain NHY66_12225 PF00175 Oxidoreductase NAD-binding domain NHY66_12230 PF01980 tRNA-methyltransferase O NHY66_12230 PF18389 TrmO C-terminal domain NHY66_12240 PF00437 Type II/IV secretion system protein NHY66_12240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NHY66_12250 PF00072 Response regulator receiver domain NHY66_12250 PF00486 Transcriptional regulatory protein, C terminal NHY66_12265 PF00293 NUDIX domain NHY66_12275 PF00905 Penicillin binding protein transpeptidase domain NHY66_12275 PF00912 Transglycosylase NHY66_12275 PF14814 Bifunctional transglycosylase second domain NHY66_12280 PF01513 ATP-NAD kinase NHY66_12285 PF07023 Protein of unknown function (DUF1315) NHY66_12290 PF02885 Glycosyl transferase family, helical bundle domain NHY66_12290 PF00591 Glycosyl transferase family, a/b domain NHY66_12295 PF00375 Sodium:dicarboxylate symporter family NHY66_12300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_12300 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_12300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_12310 PF01842 ACT domain NHY66_12310 PF01817 Chorismate mutase type II NHY66_12310 PF00800 Prephenate dehydratase NHY66_12315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY66_12325 PF01546 Peptidase family M20/M25/M40 NHY66_12325 PF07687 Peptidase dimerisation domain NHY66_12330 PF12706 Beta-lactamase superfamily domain NHY66_12340 PF03883 Peroxide stress protein YaaA NHY66_12350 PF05690 Thiazole biosynthesis protein ThiG NHY66_12365 PF04545 Sigma-70, region 4 NHY66_12365 PF00140 Sigma-70 factor, region 1.2 NHY66_12365 PF04542 Sigma-70 region 2 NHY66_12380 PF00313 'Cold-shock' DNA-binding domain NHY66_12395 PF00881 Nitroreductase family NHY66_12400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NHY66_12400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NHY66_12420 PF01180 Dihydroorotate dehydrogenase NHY66_12425 PF02674 Colicin V production protein NHY66_12430 PF00156 Phosphoribosyl transferase domain NHY66_12445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY66_12445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY66_12450 PF01435 Peptidase family M48 NHY66_12455 PF09424 Yqey-like protein NHY66_12485 PF00069 Protein kinase domain NHY66_12520 PF00171 Aldehyde dehydrogenase family NHY66_12570 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_12580 PF00893 Small Multidrug Resistance protein NHY66_12585 PF00809 Pterin binding enzyme NHY66_12600 PF07091 Ribosomal RNA methyltransferase (FmrO) NHY66_12615 PF00005 ABC transporter NHY66_12615 PF12848 ABC transporter NHY66_12620 PF01636 Phosphotransferase enzyme family NHY66_12630 PF13817 IS66 C-terminal element NHY66_12630 PF03050 Transposase IS66 family NHY66_12630 PF13005 zinc-finger binding domain of transposase IS66 NHY66_12630 PF13007 Transposase C of IS166 homeodomain NHY66_12670 PF00375 Sodium:dicarboxylate symporter family NHY66_12680 PF16123 Hydroxyacylglutathione hydrolase C-terminus NHY66_12680 PF00753 Metallo-beta-lactamase superfamily NHY66_12690 PF00005 ABC transporter NHY66_12690 PF09383 NIL domain NHY66_12695 PF03180 NLPA lipoprotein NHY66_12700 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NHY66_12700 PF02843 Phosphoribosylglycinamide synthetase, C domain NHY66_12700 PF02844 Phosphoribosylglycinamide synthetase, N domain NHY66_12705 PF01808 AICARFT/IMPCHase bienzyme NHY66_12705 PF02142 MGS-like domain NHY66_12710 PF02954 Bacterial regulatory protein, Fis family NHY66_12730 PF13932 GidA associated domain NHY66_12730 PF01134 Glucose inhibited division protein A NHY66_12740 PF14403 Circularly permuted ATP-grasp type 2 NHY66_12750 PF08379 Bacterial transglutaminase-like N-terminal region NHY66_12750 PF01841 Transglutaminase-like superfamily NHY66_12760 PF00842 Alanine racemase, C-terminal domain NHY66_12760 PF01168 Alanine racemase, N-terminal domain NHY66_12770 PF03948 Ribosomal protein L9, C-terminal domain NHY66_12770 PF01281 Ribosomal protein L9, N-terminal domain NHY66_12775 PF01084 Ribosomal protein S18 NHY66_12780 PF01250 Ribosomal protein S6 NHY66_12785 PF01040 UbiA prenyltransferase family NHY66_12790 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NHY66_12795 PF00510 Cytochrome c oxidase subunit III NHY66_12815 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NHY66_12815 PF00391 PEP-utilising enzyme, mobile domain NHY66_12815 PF02896 PEP-utilising enzyme, TIM barrel domain NHY66_12820 PF03618 Kinase/pyrophosphorylase NHY66_12830 PF14883 Hypothetical glycosyl hydrolase family 13 NHY66_12830 PF01522 Polysaccharide deacetylase NHY66_12840 PF13994 PgaD-like protein NHY66_12850 PF00296 Luciferase-like monooxygenase NHY66_12875 PF00472 RF-1 domain NHY66_12875 PF03462 PCRF domain NHY66_12880 PF17827 PrmC N-terminal domain NHY66_12880 PF13847 Methyltransferase domain NHY66_12885 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_12890 PF09084 NMT1/THI5 like NHY66_12895 PF12833 Helix-turn-helix domain NHY66_12905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_12905 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_12905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_12910 PF13193 AMP-binding enzyme C-terminal domain NHY66_12910 PF00501 AMP-binding enzyme NHY66_12920 PF00899 ThiF family NHY66_12940 PF03814 Potassium-transporting ATPase A subunit NHY66_12955 PF13493 Domain of unknown function (DUF4118) NHY66_12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_12955 PF00512 His Kinase A (phospho-acceptor) domain NHY66_12955 PF02702 Osmosensitive K+ channel His kinase sensor domain NHY66_12965 PF00120 Glutamine synthetase, catalytic domain NHY66_13010 PF00027 Cyclic nucleotide-binding domain NHY66_13010 PF00520 Ion transport protein NHY66_13015 PF07690 Major Facilitator Superfamily NHY66_13030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_13030 PF03466 LysR substrate binding domain NHY66_13035 PF04284 Protein of unknown function (DUF441) NHY66_13045 PF01479 S4 domain NHY66_13045 PF00849 RNA pseudouridylate synthase NHY66_13060 PF00849 RNA pseudouridylate synthase NHY66_13060 PF01479 S4 domain NHY66_13065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NHY66_13070 PF01119 DNA mismatch repair protein, C-terminal domain NHY66_13070 PF08676 MutL C terminal dimerisation domain NHY66_13080 PF17209 Hfq protein NHY66_13090 PF00881 Nitroreductase family NHY66_13100 PF00149 Calcineurin-like phosphoesterase NHY66_13105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY66_13110 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY66_13110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NHY66_13115 PF02540 NAD synthase NHY66_13115 PF00958 GMP synthase C terminal domain NHY66_13115 PF00117 Glutamine amidotransferase class-I NHY66_13130 PF13520 Amino acid permease NHY66_13135 PF00171 Aldehyde dehydrogenase family NHY66_13150 PF00465 Iron-containing alcohol dehydrogenase NHY66_13155 PF14493 Helix-turn-helix domain NHY66_13155 PF05970 PIF1-like helicase NHY66_13165 PF06445 GyrI-like small molecule binding domain NHY66_13170 PF02110 Hydroxyethylthiazole kinase family NHY66_13185 PF01433 Peptidase family M1 domain NHY66_13185 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NHY66_13185 PF11940 Domain of unknown function (DUF3458) Ig-like fold NHY66_13195 PF00106 short chain dehydrogenase NHY66_13205 PF01817 Chorismate mutase type II NHY66_13210 PF01037 Lrp/AsnC ligand binding domain NHY66_13225 PF00440 Bacterial regulatory proteins, tetR family NHY66_13235 PF00924 Mechanosensitive ion channel NHY66_13270 PF07715 TonB-dependent Receptor Plug Domain NHY66_13270 PF00593 TonB dependent receptor NHY66_13290 PF00005 ABC transporter NHY66_13290 PF12848 ABC transporter NHY66_13295 PF00582 Universal stress protein family NHY66_13320 PF00689 Cation transporting ATPase, C-terminus NHY66_13320 PF00690 Cation transporter/ATPase, N-terminus NHY66_13325 PF02308 MgtC family NHY66_13330 PF03594 Benzoate membrane transport protein NHY66_13335 PF01037 Lrp/AsnC ligand binding domain NHY66_13340 PF01810 LysE type translocator NHY66_13345 PF00923 Transaldolase/Fructose-6-phosphate aldolase NHY66_13350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_13350 PF03466 LysR substrate binding domain NHY66_13390 PF12170 DNA polymerase III tau subunit V interacting with alpha NHY66_13390 PF12169 DNA polymerase III subunits gamma and tau domain III NHY66_13390 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NHY66_13405 PF00465 Iron-containing alcohol dehydrogenase NHY66_13415 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY66_13435 PF01645 Conserved region in glutamate synthase NHY66_13455 PF12832 MFS_1 like family NHY66_13465 PF02785 Biotin carboxylase C-terminal domain NHY66_13465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY66_13465 PF00289 Biotin carboxylase, N-terminal domain NHY66_13470 PF00364 Biotin-requiring enzyme NHY66_13475 PF01220 Dehydroquinase class II NHY66_13490 PF00005 ABC transporter NHY66_13495 PF00072 Response regulator receiver domain NHY66_13495 PF00486 Transcriptional regulatory protein, C terminal NHY66_13505 PF04324 BFD-like [2Fe-2S] binding domain NHY66_13505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY66_13505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY66_13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_13505 PF13806 Rieske-like [2Fe-2S] domain NHY66_13505 PF18267 Rubredoxin NAD+ reductase C-terminal domain NHY66_13510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY66_13510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_13510 PF18267 Rubredoxin NAD+ reductase C-terminal domain NHY66_13510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY66_13510 PF04324 BFD-like [2Fe-2S] binding domain NHY66_13515 PF04324 BFD-like [2Fe-2S] binding domain NHY66_13515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY66_13515 PF00384 Molybdopterin oxidoreductase NHY66_13515 PF01568 Molydopterin dinucleotide binding domain NHY66_13520 PF12804 MobA-like NTP transferase domain NHY66_13530 PF06463 Molybdenum Cofactor Synthesis C NHY66_13530 PF04055 Radical SAM superfamily NHY66_13540 PF02391 MoaE protein NHY66_13545 PF00994 Probable molybdopterin binding domain NHY66_13545 PF01967 MoaC family NHY66_13550 PF03453 MoeA N-terminal region (domain I and II) NHY66_13550 PF00994 Probable molybdopterin binding domain NHY66_13550 PF03454 MoeA C-terminal region (domain IV) NHY66_13555 PF01638 HxlR-like helix-turn-helix NHY66_13560 PF00392 Bacterial regulatory proteins, gntR family NHY66_13560 PF00155 Aminotransferase class I and II NHY66_13565 PF00892 EamA-like transporter family NHY66_13585 PF02635 DsrE/DsrF-like family NHY66_13590 PF16363 GDP-mannose 4,6 dehydratase NHY66_13615 PF01266 FAD dependent oxidoreductase NHY66_13625 PF02542 YgbB family NHY66_13640 PF00440 Bacterial regulatory proteins, tetR family NHY66_13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_13650 PF00512 His Kinase A (phospho-acceptor) domain NHY66_13650 PF00989 PAS fold NHY66_13655 PF04055 Radical SAM superfamily NHY66_13655 PF00919 Uncharacterized protein family UPF0004 NHY66_13655 PF18693 TRAM domain NHY66_13660 PF00696 Amino acid kinase family NHY66_13665 PF01765 Ribosome recycling factor NHY66_13670 PF01255 Putative undecaprenyl diphosphate synthase NHY66_13685 PF13180 PDZ domain NHY66_13685 PF17820 PDZ domain NHY66_13685 PF02163 Peptidase family M50 NHY66_13700 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_13700 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NHY66_13705 PF07977 FabA-like domain NHY66_13710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NHY66_13710 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_13730 PF00154 recA bacterial DNA recombination protein NHY66_13735 PF01479 S4 domain NHY66_13740 PF13419 Haloacid dehalogenase-like hydrolase NHY66_13765 PF01037 Lrp/AsnC ligand binding domain NHY66_13770 PF00266 Aminotransferase class-V NHY66_13775 PF00324 Amino acid permease NHY66_13795 PF01740 STAS domain NHY66_13795 PF00916 Sulfate permease family NHY66_13800 PF02586 SOS response associated peptidase (SRAP) NHY66_13805 PF07995 Glucose / Sorbosone dehydrogenase NHY66_13815 PF00563 EAL domain NHY66_13815 PF00990 Diguanylate cyclase, GGDEF domain NHY66_13815 PF03707 Bacterial signalling protein N terminal repeat NHY66_13835 PF02378 Phosphotransferase system, EIIC NHY66_13835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NHY66_13840 PF00294 pfkB family carbohydrate kinase NHY66_13850 PF00381 PTS HPr component phosphorylation site NHY66_13850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NHY66_13850 PF00391 PEP-utilising enzyme, mobile domain NHY66_13850 PF05524 PEP-utilising enzyme, N-terminal NHY66_13850 PF02896 PEP-utilising enzyme, TIM barrel domain NHY66_13880 PF05525 Branched-chain amino acid transport protein NHY66_13885 PF00557 Metallopeptidase family M24 NHY66_13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_13890 PF03466 LysR substrate binding domain NHY66_13900 PF00462 Glutaredoxin NHY66_13905 PF00202 Aminotransferase class-III NHY66_13910 PF00571 CBS domain NHY66_13910 PF00478 IMP dehydrogenase / GMP reductase domain NHY66_13935 PF00448 SRP54-type protein, GTPase domain NHY66_13935 PF02881 SRP54-type protein, helical bundle domain NHY66_13945 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NHY66_13960 PF08173 Membrane bound YbgT-like protein NHY66_13965 PF02322 Cytochrome bd terminal oxidase subunit II NHY66_13970 PF01654 Cytochrome bd terminal oxidase subunit I NHY66_13980 PF07290 Protein of unknown function (DUF1449) NHY66_13995 PF00593 TonB dependent receptor NHY66_13995 PF07715 TonB-dependent Receptor Plug Domain NHY66_14000 PF08367 Peptidase M16C associated NHY66_14000 PF00675 Insulinase (Peptidase family M16) NHY66_14000 PF05193 Peptidase M16 inactive domain NHY66_14005 PF02253 Phospholipase A1 NHY66_14010 PF02386 Cation transport protein NHY66_14020 PF00585 C-terminal regulatory domain of Threonine dehydratase NHY66_14020 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_14025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NHY66_14040 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY66_14040 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY66_14050 PF02617 ATP-dependent Clp protease adaptor protein ClpS NHY66_14055 PF17871 AAA lid domain NHY66_14055 PF07724 AAA domain (Cdc48 subfamily) NHY66_14055 PF02861 Clp amino terminal domain, pathogenicity island component NHY66_14055 PF10431 C-terminal, D2-small domain, of ClpB protein NHY66_14055 PF00004 ATPase family associated with various cellular activities (AAA) NHY66_14060 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NHY66_14065 PF00793 DAHP synthetase I family NHY66_14080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY66_14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_14115 PF06418 CTP synthase N-terminus NHY66_14115 PF00117 Glutamine amidotransferase class-I NHY66_14120 PF00793 DAHP synthetase I family NHY66_14125 PF00113 Enolase, C-terminal TIM barrel domain NHY66_14125 PF03952 Enolase, N-terminal domain NHY66_14130 PF04239 Protein of unknown function (DUF421) NHY66_14135 PF04977 Septum formation initiator NHY66_14140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NHY66_14145 PF01144 Coenzyme A transferase NHY66_14150 PF01144 Coenzyme A transferase NHY66_14160 PF00206 Lyase NHY66_14160 PF10397 Adenylosuccinate lyase C-terminus NHY66_14165 PF00561 alpha/beta hydrolase fold NHY66_14175 PF02627 Carboxymuconolactone decarboxylase family NHY66_14185 PF00775 Dioxygenase NHY66_14190 PF01487 Type I 3-dehydroquinase NHY66_14195 PF05048 Periplasmic copper-binding protein (NosD) NHY66_14205 PF01011 PQQ enzyme repeat NHY66_14205 PF13360 PQQ-like domain NHY66_14225 PF00753 Metallo-beta-lactamase superfamily NHY66_14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_14235 PF03466 LysR substrate binding domain NHY66_14240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_14240 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_14240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_14255 PF00106 short chain dehydrogenase NHY66_14275 PF01425 Amidase NHY66_14295 PF00355 Rieske [2Fe-2S] domain NHY66_14295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY66_14310 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY66_14310 PF00175 Oxidoreductase NAD-binding domain NHY66_14315 PF01613 Flavin reductase like domain NHY66_14320 PF12833 Helix-turn-helix domain NHY66_14320 PF02311 AraC-like ligand binding domain NHY66_14325 PF02728 Copper amine oxidase, N3 domain NHY66_14325 PF07833 Copper amine oxidase N-terminal domain NHY66_14325 PF01179 Copper amine oxidase, enzyme domain NHY66_14325 PF02727 Copper amine oxidase, N2 domain NHY66_14335 PF00171 Aldehyde dehydrogenase family NHY66_14340 PF01804 Penicillin amidase NHY66_14345 PF12146 Serine aminopeptidase, S33 NHY66_14350 PF00108 Thiolase, N-terminal domain NHY66_14350 PF02803 Thiolase, C-terminal domain NHY66_14355 PF01144 Coenzyme A transferase NHY66_14360 PF01144 Coenzyme A transferase NHY66_14365 PF00775 Dioxygenase NHY66_14365 PF04444 Catechol dioxygenase N terminus NHY66_14370 PF02426 Muconolactone delta-isomerase NHY66_14375 PF13378 Enolase C-terminal domain-like NHY66_14375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY66_14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_14380 PF03466 LysR substrate binding domain NHY66_14390 PF00392 Bacterial regulatory proteins, gntR family NHY66_14390 PF07729 FCD domain NHY66_14400 PF07690 Major Facilitator Superfamily NHY66_14410 PF00171 Aldehyde dehydrogenase family NHY66_14430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_14430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_14430 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_14440 PF02954 Bacterial regulatory protein, Fis family NHY66_14440 PF06506 Propionate catabolism activator NHY66_14440 PF00158 Sigma-54 interaction domain NHY66_14450 PF04341 Protein of unknown function, DUF485 NHY66_14455 PF00474 Sodium:solute symporter family NHY66_14460 PF00107 Zinc-binding dehydrogenase NHY66_14460 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_14465 PF00171 Aldehyde dehydrogenase family NHY66_14475 PF00561 alpha/beta hydrolase fold NHY66_14480 PF00199 Catalase NHY66_14480 PF06628 Catalase-related immune-responsive NHY66_14495 PF07859 alpha/beta hydrolase fold NHY66_14505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY66_14505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_14510 PF00106 short chain dehydrogenase NHY66_14515 PF01872 RibD C-terminal domain NHY66_14520 PF09278 MerR, DNA binding NHY66_14520 PF00376 MerR family regulatory protein NHY66_14545 PF00440 Bacterial regulatory proteins, tetR family NHY66_14545 PF08359 YsiA-like protein, C-terminal region NHY66_14555 PF00857 Isochorismatase family NHY66_14560 PF03466 LysR substrate binding domain NHY66_14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_14580 PF01546 Peptidase family M20/M25/M40 NHY66_14580 PF07687 Peptidase dimerisation domain NHY66_14590 PF08479 POTRA domain, ShlB-type NHY66_14590 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NHY66_14590 PF17287 POTRA domain NHY66_14595 PF05860 haemagglutination activity domain NHY66_14595 PF04829 Pre-toxin domain with VENN motif NHY66_14595 PF13018 Extended Signal Peptide of Type V secretion system NHY66_14595 PF13332 Hemagglutinin repeat NHY66_14610 PF07690 Major Facilitator Superfamily NHY66_14615 PF04909 Amidohydrolase NHY66_14625 PF07702 UTRA domain NHY66_14625 PF00392 Bacterial regulatory proteins, gntR family NHY66_14630 PF08450 SMP-30/Gluconolactonase/LRE-like region NHY66_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_14640 PF03466 LysR substrate binding domain NHY66_14660 PF07690 Major Facilitator Superfamily NHY66_14670 PF03737 Aldolase/RraA NHY66_14705 PF00529 HlyD membrane-fusion protein of T1SS NHY66_14705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY66_14720 PF00171 Aldehyde dehydrogenase family NHY66_14725 PF00171 Aldehyde dehydrogenase family NHY66_14730 PF00920 Dehydratase family NHY66_14740 PF03466 LysR substrate binding domain NHY66_14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_14745 PF01370 NAD dependent epimerase/dehydratase family NHY66_14755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY66_14755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY66_14760 PF12833 Helix-turn-helix domain NHY66_14760 PF06719 AraC-type transcriptional regulator N-terminus NHY66_14775 PF00107 Zinc-binding dehydrogenase NHY66_14775 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_14785 PF01032 FecCD transport family NHY66_14790 PF00005 ABC transporter NHY66_14810 PF14572 Phosphoribosyl synthetase-associated domain NHY66_14810 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY66_14890 PF00196 Bacterial regulatory proteins, luxR family NHY66_14895 PF01425 Amidase NHY66_14900 PF13533 Biotin-lipoyl like NHY66_14905 PF07690 Major Facilitator Superfamily NHY66_14930 PF01975 Survival protein SurE NHY66_14940 PF02824 TGS domain NHY66_14940 PF13291 ACT domain NHY66_14940 PF04607 Region found in RelA / SpoT proteins NHY66_14990 PF12146 Serine aminopeptidase, S33 NHY66_15005 PF00672 HAMP domain NHY66_15005 PF16527 Two-component sensor protein CpxA, periplasmic domain NHY66_15005 PF00512 His Kinase A (phospho-acceptor) domain NHY66_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_15010 PF00072 Response regulator receiver domain NHY66_15010 PF00486 Transcriptional regulatory protein, C terminal NHY66_15015 PF00529 HlyD membrane-fusion protein of T1SS NHY66_15015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY66_15040 PF01593 Flavin containing amine oxidoreductase NHY66_15055 PF01266 FAD dependent oxidoreductase NHY66_15075 PF16970 Type-1 fimbrial protein, A NHY66_15085 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY66_15085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY66_15090 PF13954 PapC N-terminal domain NHY66_15090 PF13953 PapC C-terminal domain NHY66_15090 PF00577 Outer membrane usher protein NHY66_15095 PF00419 Fimbrial protein NHY66_15105 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_15105 PF00107 Zinc-binding dehydrogenase NHY66_15115 PF00199 Catalase NHY66_15130 PF13091 PLD-like domain NHY66_15145 PF01244 Membrane dipeptidase (Peptidase family M19) NHY66_15150 PF04055 Radical SAM superfamily NHY66_15150 PF13186 Iron-sulfur cluster-binding domain NHY66_15155 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NHY66_15160 PF03070 TENA/THI-4/PQQC family NHY66_15170 PF08042 PqqA family NHY66_15195 PF00857 Isochorismatase family NHY66_15195 PF00550 Phosphopantetheine attachment site NHY66_15200 PF00106 short chain dehydrogenase NHY66_15205 PF00005 ABC transporter NHY66_15205 PF03459 TOBE domain NHY66_15210 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_15220 PF03459 TOBE domain NHY66_15225 PF00355 Rieske [2Fe-2S] domain NHY66_15225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY66_15230 PF00866 Ring hydroxylating beta subunit NHY66_15235 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY66_15235 PF00970 Oxidoreductase FAD-binding domain NHY66_15235 PF00175 Oxidoreductase NAD-binding domain NHY66_15250 PF01613 Flavin reductase like domain NHY66_15265 PF01738 Dienelactone hydrolase family NHY66_15270 PF07690 Major Facilitator Superfamily NHY66_15275 PF12833 Helix-turn-helix domain NHY66_15275 PF06719 AraC-type transcriptional regulator N-terminus NHY66_15300 PF03466 LysR substrate binding domain NHY66_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_15310 PF01144 Coenzyme A transferase NHY66_15315 PF02667 Short chain fatty acid transporter NHY66_15320 PF00108 Thiolase, N-terminal domain NHY66_15320 PF02803 Thiolase, C-terminal domain NHY66_15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_15325 PF03466 LysR substrate binding domain NHY66_15330 PF03466 LysR substrate binding domain NHY66_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_15350 PF00872 Transposase, Mutator family NHY66_15390 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY66_15415 PF02525 Flavodoxin-like fold NHY66_15420 PF01638 HxlR-like helix-turn-helix NHY66_15425 PF06445 GyrI-like small molecule binding domain NHY66_15425 PF12833 Helix-turn-helix domain NHY66_15445 PF01925 Sulfite exporter TauE/SafE NHY66_15470 PF00753 Metallo-beta-lactamase superfamily NHY66_15470 PF04273 Putative phosphatase (DUF442) NHY66_15475 PF00158 Sigma-54 interaction domain NHY66_15475 PF00072 Response regulator receiver domain NHY66_15475 PF02954 Bacterial regulatory protein, Fis family NHY66_15485 PF08240 Alcohol dehydrogenase GroES-like domain NHY66_15485 PF00107 Zinc-binding dehydrogenase NHY66_15490 PF00106 short chain dehydrogenase NHY66_15495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY66_15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_15500 PF00364 Biotin-requiring enzyme NHY66_15500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY66_15500 PF02817 e3 binding domain NHY66_15505 PF02779 Transketolase, pyrimidine binding domain NHY66_15505 PF02780 Transketolase, C-terminal domain NHY66_15510 PF00676 Dehydrogenase E1 component NHY66_15515 PF04055 Radical SAM superfamily NHY66_15530 PF08448 PAS fold NHY66_15530 PF00990 Diguanylate cyclase, GGDEF domain NHY66_15540 PF05175 Methyltransferase small domain NHY66_15545 PF00291 Pyridoxal-phosphate dependent enzyme NHY66_15555 PF00004 ATPase family associated with various cellular activities (AAA) NHY66_15555 PF17862 AAA+ lid domain NHY66_15555 PF01434 Peptidase family M41 NHY66_15565 PF05166 YcgL domain NHY66_15600 PF02132 RecR protein NHY66_15600 PF13662 Toprim domain NHY66_15605 PF02575 YbaB/EbfC DNA-binding family NHY66_15615 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY66_15620 PF00561 alpha/beta hydrolase fold NHY66_15655 PF01230 HIT domain NHY66_15695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY66_15705 PF02684 Lipid-A-disaccharide synthetase NHY66_15735 PF00793 DAHP synthetase I family NHY66_15740 PF02654 Cobalamin-5-phosphate synthase NHY66_15755 PF02277 Phosphoribosyltransferase NHY66_15760 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NHY66_15770 PF13419 Haloacid dehalogenase-like hydrolase NHY66_15795 PF07715 TonB-dependent Receptor Plug Domain NHY66_15795 PF00593 TonB dependent receptor NHY66_15810 PF06276 Ferric iron reductase FhuF-like transporter NHY66_15810 PF04183 IucA / IucC family NHY66_15830 PF04183 IucA / IucC family NHY66_15830 PF06276 Ferric iron reductase FhuF-like transporter NHY66_15835 PF04073 Aminoacyl-tRNA editing domain NHY66_15845 PF03109 ABC1 family NHY66_15850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_15850 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_15850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_15855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_15855 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_15855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_15860 PF00487 Fatty acid desaturase NHY66_15865 PF12852 Cupin NHY66_15865 PF12833 Helix-turn-helix domain NHY66_15875 PF00216 Bacterial DNA-binding protein NHY66_15890 PF02082 Transcriptional regulator NHY66_15895 PF00266 Aminotransferase class-V NHY66_15900 PF01592 NifU-like N terminal domain NHY66_15905 PF01521 Iron-sulphur cluster biosynthesis NHY66_15910 PF07743 HSCB C-terminal oligomerisation domain NHY66_15910 PF00226 DnaJ domain NHY66_15915 PF00012 Hsp70 protein NHY66_15920 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY66_15955 PF03737 Aldolase/RraA NHY66_15960 PF13460 NAD(P)H-binding NHY66_15965 PF01649 Ribosomal protein S20 NHY66_15990 PF00005 ABC transporter NHY66_15990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY66_15995 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_16025 PF00593 TonB dependent receptor NHY66_16025 PF07715 TonB-dependent Receptor Plug Domain NHY66_16035 PF01618 MotA/TolQ/ExbB proton channel family NHY66_16040 PF02472 Biopolymer transport protein ExbD/TolR NHY66_16045 PF02472 Biopolymer transport protein ExbD/TolR NHY66_16060 PF03969 AFG1-like ATPase NHY66_16070 PF00743 Flavin-binding monooxygenase-like NHY66_16080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NHY66_16100 PF02224 Cytidylate kinase NHY66_16110 PF14437 MafB19-like deaminase NHY66_16120 PF03167 Uracil DNA glycosylase superfamily NHY66_16135 PF07963 Prokaryotic N-terminal methylation motif NHY66_16135 PF11612 Type II secretion system (T2SS), protein J NHY66_16140 PF07963 Prokaryotic N-terminal methylation motif NHY66_16140 PF02501 Type II secretion system (T2SS), protein I NHY66_16155 PF01026 TatD related DNase NHY66_16165 PF09115 DNA polymerase III, delta subunit, C terminal NHY66_16170 PF02348 Cytidylyltransferase NHY66_16175 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NHY66_16180 PF00005 ABC transporter NHY66_16180 PF00664 ABC transporter transmembrane region NHY66_16190 PF01618 MotA/TolQ/ExbB proton channel family NHY66_16200 PF13614 AAA domain NHY66_16205 PF02527 rRNA small subunit methyltransferase G NHY66_16210 PF00483 Nucleotidyl transferase NHY66_16215 PF01636 Phosphotransferase enzyme family NHY66_16225 PF00639 PPIC-type PPIASE domain NHY66_16225 PF09312 SurA N-terminal domain NHY66_16230 PF01116 Fructose-bisphosphate aldolase class-II NHY66_16240 PF00162 Phosphoglycerate kinase NHY66_16250 PF02545 Maf-like protein NHY66_16270 PF00375 Sodium:dicarboxylate symporter family NHY66_16280 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NHY66_16300 PF01597 Glycine cleavage H-protein NHY66_16305 PF02146 Sir2 family NHY66_16315 PF01037 Lrp/AsnC ligand binding domain NHY66_16320 PF00171 Aldehyde dehydrogenase family NHY66_16320 PF14850 DNA-binding domain of Proline dehydrogenase NHY66_16320 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NHY66_16320 PF01619 Proline dehydrogenase NHY66_16325 PF04229 GrpB protein NHY66_16340 PF09992 Phosphodiester glycosidase NHY66_16350 PF04264 YceI-like domain NHY66_16365 PF02773 S-adenosylmethionine synthetase, C-terminal domain NHY66_16365 PF02772 S-adenosylmethionine synthetase, central domain NHY66_16365 PF00438 S-adenosylmethionine synthetase, N-terminal domain NHY66_16400 PF02075 Crossover junction endodeoxyribonuclease RuvC NHY66_16405 PF01256 Carbohydrate kinase NHY66_16405 PF03853 YjeF-related protein N-terminus NHY66_16410 PF08331 Domain of unknown function (DUF1730) NHY66_16415 PF04055 Radical SAM superfamily NHY66_16415 PF06968 Biotin and Thiamin Synthesis associated domain NHY66_16430 PF16970 Type-1 fimbrial protein, A NHY66_16460 PF00892 EamA-like transporter family NHY66_16470 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY66_16480 PF03466 LysR substrate binding domain NHY66_16480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_16500 PF00440 Bacterial regulatory proteins, tetR family NHY66_16510 PF01709 Transcriptional regulator NHY66_16515 PF01037 Lrp/AsnC ligand binding domain NHY66_16525 PF00005 ABC transporter NHY66_16530 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_16560 PF00296 Luciferase-like monooxygenase NHY66_16570 PF03180 NLPA lipoprotein NHY66_16575 PF00005 ABC transporter NHY66_16575 PF09383 NIL domain NHY66_16580 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_16585 PF01926 50S ribosome-binding GTPase NHY66_16585 PF06071 Protein of unknown function (DUF933) NHY66_16610 PF03591 AzlC protein NHY66_16615 PF05437 Branched-chain amino acid transport protein (AzlD) NHY66_16625 PF02222 ATP-grasp domain NHY66_16635 PF00155 Aminotransferase class I and II NHY66_16645 PF12852 Cupin NHY66_16645 PF12833 Helix-turn-helix domain NHY66_16650 PF00255 Glutathione peroxidase NHY66_16655 PF01641 SelR domain NHY66_16660 PF00155 Aminotransferase class I and II NHY66_16670 PF00710 Asparaginase, N-terminal NHY66_16670 PF17763 Glutaminase/Asparaginase C-terminal domain NHY66_16680 PF00588 SpoU rRNA Methylase family NHY66_16685 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_16700 PF13192 Thioredoxin domain NHY66_16700 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_16715 PF03466 LysR substrate binding domain NHY66_16720 PF01758 Sodium Bile acid symporter family NHY66_16725 PF01022 Bacterial regulatory protein, arsR family NHY66_16730 PF03960 ArsC family NHY66_16740 PF01979 Amidohydrolase family NHY66_16740 PF13382 Adenine deaminase C-terminal domain NHY66_16750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_16750 PF03466 LysR substrate binding domain NHY66_16760 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY66_16765 PF01177 Asp/Glu/Hydantoin racemase NHY66_16770 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NHY66_16775 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_16780 PF00005 ABC transporter NHY66_16785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY66_16805 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY66_16805 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_16805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_16820 PF02322 Cytochrome bd terminal oxidase subunit II NHY66_16830 PF00392 Bacterial regulatory proteins, gntR family NHY66_16830 PF00155 Aminotransferase class I and II NHY66_16835 PF03466 LysR substrate binding domain NHY66_16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_16850 PF00698 Acyl transferase domain NHY66_16855 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NHY66_16870 PF06857 Malonate decarboxylase delta subunit (MdcD) NHY66_16880 PF16957 Malonate decarboxylase, alpha subunit, transporter NHY66_16885 PF07690 Major Facilitator Superfamily NHY66_16900 PF00392 Bacterial regulatory proteins, gntR family NHY66_16900 PF00155 Aminotransferase class I and II NHY66_16905 PF04172 LrgB-like family NHY66_16910 PF03788 LrgA family NHY66_16920 PF14834 Glutathione S-transferase, C-terminal domain NHY66_16920 PF02798 Glutathione S-transferase, N-terminal domain NHY66_16925 PF02798 Glutathione S-transferase, N-terminal domain NHY66_16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_16930 PF03466 LysR substrate binding domain NHY66_16940 PF00581 Rhodanese-like domain NHY66_16945 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_16955 PF00266 Aminotransferase class-V NHY66_16965 PF01810 LysE type translocator NHY66_16980 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY66_16985 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY66_16990 PF00005 ABC transporter NHY66_16995 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_17000 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_17015 PF00072 Response regulator receiver domain NHY66_17020 PF09308 LuxQ, periplasmic NHY66_17020 PF00512 His Kinase A (phospho-acceptor) domain NHY66_17020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY66_17020 PF00072 Response regulator receiver domain NHY66_17030 PF01037 Lrp/AsnC ligand binding domain NHY66_17030 PF13404 AsnC-type helix-turn-helix domain NHY66_17040 PF00717 Peptidase S24-like NHY66_17085 PF00994 Probable molybdopterin binding domain NHY66_17085 PF02464 Competence-damaged protein NHY66_17085 PF18146 Damage-inducible protein CinA KH domain NHY66_17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_17120 PF03466 LysR substrate binding domain NHY66_17140 PF13193 AMP-binding enzyme C-terminal domain NHY66_17140 PF00501 AMP-binding enzyme NHY66_17145 PF00440 Bacterial regulatory proteins, tetR family NHY66_17150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_17150 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_17150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_17155 PF01039 Carboxyl transferase domain NHY66_17160 PF00378 Enoyl-CoA hydratase/isomerase NHY66_17175 PF03466 LysR substrate binding domain NHY66_17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_17200 PF07690 Major Facilitator Superfamily NHY66_17210 PF01144 Coenzyme A transferase NHY66_17225 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_17225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_17225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_17230 PF00378 Enoyl-CoA hydratase/isomerase NHY66_17240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY66_17240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY66_17240 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY66_17245 PF02803 Thiolase, C-terminal domain NHY66_17245 PF00108 Thiolase, N-terminal domain NHY66_17260 PF03060 Nitronate monooxygenase NHY66_17265 PF00378 Enoyl-CoA hydratase/isomerase NHY66_17270 PF09339 IclR helix-turn-helix domain NHY66_17275 PF02515 CoA-transferase family III NHY66_17280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY66_17280 PF02770 Acyl-CoA dehydrogenase, middle domain NHY66_17280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY66_17285 PF07690 Major Facilitator Superfamily NHY66_17290 PF13419 Haloacid dehalogenase-like hydrolase NHY66_17295 PF00266 Aminotransferase class-V NHY66_17300 PF01266 FAD dependent oxidoreductase NHY66_17310 PF00005 ABC transporter NHY66_17310 PF08402 TOBE domain NHY66_17320 PF00392 Bacterial regulatory proteins, gntR family NHY66_17320 PF07702 UTRA domain NHY66_17325 PF01494 FAD binding domain NHY66_17330 PF09339 IclR helix-turn-helix domain NHY66_17330 PF01614 Bacterial transcriptional regulator NHY66_17340 PF03466 LysR substrate binding domain NHY66_17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_17345 PF02627 Carboxymuconolactone decarboxylase family NHY66_17360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY66_17370 PF00171 Aldehyde dehydrogenase family NHY66_17375 PF00296 Luciferase-like monooxygenase NHY66_17380 PF01613 Flavin reductase like domain NHY66_17385 PF12697 Alpha/beta hydrolase family NHY66_17405 PF01292 Prokaryotic cytochrome b561 NHY66_17410 PF00199 Catalase NHY66_17445 PF03061 Thioesterase superfamily NHY66_17450 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_17455 PF07848 PaaX-like protein NHY66_17455 PF08223 PaaX-like protein C-terminal domain NHY66_17460 PF00501 AMP-binding enzyme NHY66_17460 PF14535 AMP-binding enzyme C-terminal domain NHY66_17465 PF00108 Thiolase, N-terminal domain NHY66_17465 PF02803 Thiolase, C-terminal domain NHY66_17475 PF00378 Enoyl-CoA hydratase/isomerase NHY66_17490 PF01883 Iron-sulfur cluster assembly protein NHY66_17495 PF05138 Phenylacetic acid catabolic protein NHY66_17500 PF06243 Phenylacetic acid degradation B NHY66_17510 PF00171 Aldehyde dehydrogenase family NHY66_17510 PF01575 MaoC like domain NHY66_17515 PF03313 Serine dehydratase alpha chain NHY66_17515 PF03315 Serine dehydratase beta chain NHY66_17520 PF13520 Amino acid permease NHY66_17525 PF00171 Aldehyde dehydrogenase family NHY66_17530 PF00083 Sugar (and other) transporter NHY66_17535 PF00083 Sugar (and other) transporter NHY66_17545 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_17545 PF04324 BFD-like [2Fe-2S] binding domain NHY66_17565 PF00392 Bacterial regulatory proteins, gntR family NHY66_17575 PF00701 Dihydrodipicolinate synthetase family NHY66_17600 PF02677 Epoxyqueuosine reductase QueH NHY66_17615 PF07690 Major Facilitator Superfamily NHY66_17620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY66_17630 PF03466 LysR substrate binding domain NHY66_17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_17650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NHY66_17655 PF06812 ImpA, N-terminal, type VI secretion system NHY66_17675 PF01389 OmpA-like transmembrane domain NHY66_17675 PF00691 OmpA family NHY66_17700 PF05947 Type VI secretion system, TssF NHY66_17715 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NHY66_17740 PF00005 ABC transporter NHY66_17745 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY66_17750 PF01425 Amidase NHY66_17755 PF01402 Ribbon-helix-helix protein, copG family NHY66_17755 PF08753 NikR C terminal nickel binding domain NHY66_17775 PF02525 Flavodoxin-like fold NHY66_17825 PF00654 Voltage gated chloride channel NHY66_17840 PF07286 Protein of unknown function (DUF1445) NHY66_17845 PF03746 LamB/YcsF family NHY66_17850 PF01566 Natural resistance-associated macrophage protein NHY66_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_17855 PF03466 LysR substrate binding domain NHY66_17940 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY66_17960 PF01037 Lrp/AsnC ligand binding domain NHY66_17965 PF00488 MutS domain V NHY66_17965 PF05190 MutS family domain IV NHY66_17965 PF05192 MutS domain III NHY66_17965 PF05188 MutS domain II NHY66_17965 PF01624 MutS domain I NHY66_17975 PF11953 Domain of unknown function (DUF3470) NHY66_17975 PF00037 4Fe-4S binding domain NHY66_17985 PF01596 O-methyltransferase NHY66_17995 PF00132 Bacterial transferase hexapeptide (six repeats) NHY66_18000 PF01205 Uncharacterized protein family UPF0029 NHY66_18015 PF02321 Outer membrane efflux protein NHY66_18020 PF00005 ABC transporter NHY66_18020 PF12399 Branched-chain amino acid ATP-binding cassette transporter NHY66_18025 PF03968 OstA-like protein NHY66_18040 PF00571 CBS domain NHY66_18040 PF01380 SIS domain NHY66_18045 PF09190 DALR domain NHY66_18045 PF01406 tRNA synthetases class I (C) catalytic domain NHY66_18070 PF01638 HxlR-like helix-turn-helix NHY66_18100 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY66_18100 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY66_18110 PF00313 'Cold-shock' DNA-binding domain NHY66_18115 PF01810 LysE type translocator NHY66_18145 PF13742 OB-fold nucleic acid binding domain NHY66_18145 PF02601 Exonuclease VII, large subunit NHY66_18180 PF00376 MerR family regulatory protein NHY66_18180 PF09278 MerR, DNA binding NHY66_18185 PF00403 Heavy-metal-associated domain NHY66_18190 PF00403 Heavy-metal-associated domain NHY66_18195 PF03466 LysR substrate binding domain NHY66_18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY66_18205 PF00355 Rieske [2Fe-2S] domain NHY66_18205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY66_18210 PF00866 Ring hydroxylating beta subunit NHY66_18215 PF00175 Oxidoreductase NAD-binding domain NHY66_18215 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY66_18215 PF00970 Oxidoreductase FAD-binding domain NHY66_18225 PF03594 Benzoate membrane transport protein NHY66_18240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NHY66_18240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NHY66_18245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NHY66_18245 PF00271 Helicase conserved C-terminal domain NHY66_18245 PF04408 Helicase associated domain (HA2) NHY66_18245 PF11898 Domain of unknown function (DUF3418) NHY66_18245 PF00270 DEAD/DEAH box helicase NHY66_18250 PF00578 AhpC/TSA family NHY66_18250 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY66_18270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_18270 PF13192 Thioredoxin domain NHY66_18280 PF02798 Glutathione S-transferase, N-terminal domain NHY66_18280 PF00043 Glutathione S-transferase, C-terminal domain NHY66_18290 PF02390 Putative methyltransferase NHY66_18295 PF00043 Glutathione S-transferase, C-terminal domain NHY66_18295 PF13417 Glutathione S-transferase, N-terminal domain NHY66_18305 PF00691 OmpA family NHY66_18305 PF13488 Glycine zipper NHY66_18325 PF10672 S-adenosylmethionine-dependent methyltransferase NHY66_18325 PF02926 THUMP domain NHY66_18325 PF01170 Putative RNA methylase family UPF0020 NHY66_18360 PF02566 OsmC-like protein NHY66_18370 PF13545 Crp-like helix-turn-helix domain NHY66_18370 PF00027 Cyclic nucleotide-binding domain NHY66_18380 PF00248 Aldo/keto reductase family NHY66_18395 PF00709 Adenylosuccinate synthetase NHY66_18405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY66_18405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY66_18420 PF02599 Global regulator protein family NHY66_18425 PF01351 Ribonuclease HII NHY66_18435 PF01292 Prokaryotic cytochrome b561 NHY66_18440 PF00962 Adenosine/AMP deaminase NHY66_18445 PF00860 Permease family NHY66_18455 PF00743 Flavin-binding monooxygenase-like NHY66_18460 PF00106 short chain dehydrogenase NHY66_18470 PF17954 Quercetinase C-terminal cupin domain NHY66_18470 PF02678 Pirin NHY66_18475 PF17932 Tetracyclin repressor-like, C-terminal domain NHY66_18475 PF00440 Bacterial regulatory proteins, tetR family NHY66_18485 PF00106 short chain dehydrogenase NHY66_18495 PF13610 DDE domain NHY66_18505 PF02796 Helix-turn-helix domain of resolvase NHY66_18505 PF00239 Resolvase, N terminal domain NHY66_18515 PF13610 DDE domain NHY66_18525 PF02796 Helix-turn-helix domain of resolvase NHY66_18525 PF00239 Resolvase, N terminal domain NHY66_18540 PF04958 Arginine N-succinyltransferase beta subunit NHY66_18565 PF00392 Bacterial regulatory proteins, gntR family NHY66_18565 PF07729 FCD domain NHY66_18575 PF00324 Amino acid permease NHY66_18580 PF01266 FAD dependent oxidoreductase NHY66_18625 PF03527 RHS protein NHY66_18625 PF05593 RHS Repeat NHY66_18630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY66_18630 PF04717 Type VI secretion system, phage-baseplate injector NHY66_18630 PF13296 Putative type VI secretion system Rhs element Vgr NHY66_18655 PF05987 Bacterial protein of unknown function (DUF898) NHY66_18675 PF00764 Arginosuccinate synthase NHY66_18680 PF00563 EAL domain NHY66_18680 PF01590 GAF domain NHY66_18680 PF00990 Diguanylate cyclase, GGDEF domain NHY66_18680 PF00360 Phytochrome region NHY66_18685 PF01979 Amidohydrolase family NHY66_18690 PF00929 Exonuclease NHY66_18700 PF07715 TonB-dependent Receptor Plug Domain NHY66_18700 PF00593 TonB dependent receptor NHY66_18705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY66_18705 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY66_18710 PF00005 ABC transporter NHY66_18710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY66_18720 PF00528 Binding-protein-dependent transport system inner membrane component NHY66_18725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NHY66_18745 PF00293 NUDIX domain NHY66_18745 PF09297 NADH pyrophosphatase zinc ribbon domain