locus-tag class description NHY67_00010 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_00015 PF01205 Uncharacterized protein family UPF0029 NHY67_00025 PF00664 ABC transporter transmembrane region NHY67_00025 PF00005 ABC transporter NHY67_00025 PF03412 Peptidase C39 family NHY67_00030 PF02321 Outer membrane efflux protein NHY67_00035 PF00005 ABC transporter NHY67_00035 PF12399 Branched-chain amino acid ATP-binding cassette transporter NHY67_00040 PF03968 OstA-like protein NHY67_00055 PF00571 CBS domain NHY67_00055 PF01380 SIS domain NHY67_00085 PF01638 HxlR-like helix-turn-helix NHY67_00090 PF07690 Major Facilitator Superfamily NHY67_00100 PF13737 Transposase DDE domain NHY67_00120 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY67_00120 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY67_00130 PF00313 'Cold-shock' DNA-binding domain NHY67_00135 PF01810 LysE type translocator NHY67_00165 PF02601 Exonuclease VII, large subunit NHY67_00165 PF13742 OB-fold nucleic acid binding domain NHY67_00200 PF09278 MerR, DNA binding NHY67_00200 PF00376 MerR family regulatory protein NHY67_00205 PF00403 Heavy-metal-associated domain NHY67_00210 PF00403 Heavy-metal-associated domain NHY67_00215 PF03466 LysR substrate binding domain NHY67_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_00225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY67_00225 PF00355 Rieske [2Fe-2S] domain NHY67_00230 PF00866 Ring hydroxylating beta subunit NHY67_00235 PF00175 Oxidoreductase NAD-binding domain NHY67_00235 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_00235 PF00970 Oxidoreductase FAD-binding domain NHY67_00240 PF00106 short chain dehydrogenase NHY67_00245 PF03594 Benzoate membrane transport protein NHY67_00260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NHY67_00260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NHY67_00270 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY67_00270 PF00578 AhpC/TSA family NHY67_00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_00290 PF13192 Thioredoxin domain NHY67_00300 PF00043 Glutathione S-transferase, C-terminal domain NHY67_00300 PF02798 Glutathione S-transferase, N-terminal domain NHY67_00310 PF02390 Putative methyltransferase NHY67_00315 PF13417 Glutathione S-transferase, N-terminal domain NHY67_00315 PF00043 Glutathione S-transferase, C-terminal domain NHY67_00325 PF13488 Glycine zipper NHY67_00325 PF00691 OmpA family NHY67_00330 PF01979 Amidohydrolase family NHY67_00345 PF10672 S-adenosylmethionine-dependent methyltransferase NHY67_00345 PF02926 THUMP domain NHY67_00345 PF01170 Putative RNA methylase family UPF0020 NHY67_00360 PF00004 ATPase family associated with various cellular activities (AAA) NHY67_00360 PF02861 Clp amino terminal domain, pathogenicity island component NHY67_00360 PF10431 C-terminal, D2-small domain, of ClpB protein NHY67_00360 PF17871 AAA lid domain NHY67_00360 PF07724 AAA domain (Cdc48 subfamily) NHY67_00375 PF02566 OsmC-like protein NHY67_00385 PF00027 Cyclic nucleotide-binding domain NHY67_00385 PF13545 Crp-like helix-turn-helix domain NHY67_00395 PF00248 Aldo/keto reductase family NHY67_00410 PF00709 Adenylosuccinate synthetase NHY67_00415 PF13393 Histidyl-tRNA synthetase NHY67_00420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY67_00420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY67_00430 PF13840 ACT domain NHY67_00430 PF01842 ACT domain NHY67_00430 PF00696 Amino acid kinase family NHY67_00435 PF02599 Global regulator protein family NHY67_00450 PF01292 Prokaryotic cytochrome b561 NHY67_00455 PF00962 Adenosine/AMP deaminase NHY67_00460 PF00860 Permease family NHY67_00470 PF00743 Flavin-binding monooxygenase-like NHY67_00480 PF00106 short chain dehydrogenase NHY67_00490 PF17954 Quercetinase C-terminal cupin domain NHY67_00490 PF02678 Pirin NHY67_00495 PF00440 Bacterial regulatory proteins, tetR family NHY67_00495 PF17932 Tetracyclin repressor-like, C-terminal domain NHY67_00500 PF13610 DDE domain NHY67_00505 PF01636 Phosphotransferase enzyme family NHY67_00515 PF13610 DDE domain NHY67_00520 PF00239 Resolvase, N terminal domain NHY67_00520 PF02796 Helix-turn-helix domain of resolvase NHY67_00530 PF13610 DDE domain NHY67_00540 PF00239 Resolvase, N terminal domain NHY67_00540 PF02796 Helix-turn-helix domain of resolvase NHY67_00545 PF13610 DDE domain NHY67_00560 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_00560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY67_00565 PF00764 Arginosuccinate synthase NHY67_00570 PF00360 Phytochrome region NHY67_00570 PF00990 Diguanylate cyclase, GGDEF domain NHY67_00570 PF01590 GAF domain NHY67_00570 PF00563 EAL domain NHY67_00575 PF01979 Amidohydrolase family NHY67_00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_00595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY67_00600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY67_00600 PF00005 ABC transporter NHY67_00610 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_00615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NHY67_00635 PF09297 NADH pyrophosphatase zinc ribbon domain NHY67_00635 PF00293 NUDIX domain NHY67_00645 PF04972 BON domain NHY67_00650 PF02021 Uncharacterised protein family UPF0102 NHY67_00655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY67_00665 PF03466 LysR substrate binding domain NHY67_00665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_00670 PF01810 LysE type translocator NHY67_00680 PF13411 MerR HTH family regulatory protein NHY67_00695 PF01494 FAD binding domain NHY67_00740 PF00884 Sulfatase NHY67_00740 PF08019 Phosphoethanolamine transferase EptA/EptB NHY67_00790 PF01551 Peptidase family M23 NHY67_00790 PF08525 Opacity-associated protein A N-terminal motif NHY67_00790 PF01476 LysM domain NHY67_01115 PF04355 SmpA / OmlA family NHY67_01115 PF00691 OmpA family NHY67_01125 PF02190 ATP-dependent protease La (LON) substrate-binding domain NHY67_01125 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY67_01125 PF00004 ATPase family associated with various cellular activities (AAA) NHY67_01130 PF02590 Predicted SPOUT methyltransferase NHY67_01135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NHY67_01145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY67_01145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY67_01150 PF04060 Putative Fe-S cluster NHY67_01155 PF10576 Iron-sulfur binding domain of endonuclease III NHY67_01155 PF00633 Helix-hairpin-helix motif NHY67_01155 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY67_01165 PF05191 Adenylate kinase, active site lid NHY67_01180 PF00905 Penicillin binding protein transpeptidase domain NHY67_01180 PF03717 Penicillin-binding Protein dimerisation domain NHY67_01195 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY67_01200 PF01730 UreF NHY67_01205 PF05194 UreE urease accessory protein, C-terminal domain NHY67_01205 PF02814 UreE urease accessory protein, N-terminal domain NHY67_01215 PF00699 Urease beta subunit NHY67_01220 PF00547 Urease, gamma subunit NHY67_01225 PF01774 UreD urease accessory protein NHY67_01240 PF00463 Isocitrate lyase family NHY67_01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_01245 PF03466 LysR substrate binding domain NHY67_01250 PF00571 CBS domain NHY67_01250 PF03471 Transporter associated domain NHY67_01250 PF01595 Cyclin M transmembrane N-terminal domain NHY67_01255 PF03600 Citrate transporter NHY67_01270 PF00009 Elongation factor Tu GTP binding domain NHY67_01275 PF01507 Phosphoadenosine phosphosulfate reductase family NHY67_01290 PF14052 Capsule assembly protein Wzi NHY67_01310 PF00301 Rubredoxin NHY67_01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_01315 PF18113 Rubredoxin binding C-terminal domain NHY67_01320 PF00561 alpha/beta hydrolase fold NHY67_01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_01325 PF03466 LysR substrate binding domain NHY67_01335 PF13089 Polyphosphate kinase N-terminal domain NHY67_01335 PF02503 Polyphosphate kinase middle domain NHY67_01335 PF17941 Polyphosphate kinase C-terminal domain 1 NHY67_01335 PF13090 Polyphosphate kinase C-terminal domain 2 NHY67_01340 PF00912 Transglycosylase NHY67_01345 PF01694 Rhomboid family NHY67_01355 PF00005 ABC transporter NHY67_01360 PF13472 GDSL-like Lipase/Acylhydrolase family NHY67_01365 PF00484 Carbonic anhydrase NHY67_01370 PF00561 alpha/beta hydrolase fold NHY67_01380 PF07715 TonB-dependent Receptor Plug Domain NHY67_01380 PF00593 TonB dependent receptor NHY67_01385 PF01106 NifU-like domain NHY67_01385 PF01521 Iron-sulphur cluster biosynthesis NHY67_01415 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_01420 PF01384 Phosphate transporter family NHY67_01430 PF02780 Transketolase, C-terminal domain NHY67_01430 PF02779 Transketolase, pyrimidine binding domain NHY67_01435 PF00456 Transketolase, thiamine diphosphate binding domain NHY67_01440 PF07690 Major Facilitator Superfamily NHY67_01450 PF03466 LysR substrate binding domain NHY67_01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_01460 PF01263 Aldose 1-epimerase NHY67_01465 PF07690 Major Facilitator Superfamily NHY67_01470 PF12833 Helix-turn-helix domain NHY67_01470 PF02311 AraC-like ligand binding domain NHY67_01475 PF04960 Glutaminase NHY67_01480 PF01327 Polypeptide deformylase NHY67_01485 PF07690 Major Facilitator Superfamily NHY67_01495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY67_01495 PF00205 Thiamine pyrophosphate enzyme, central domain NHY67_01495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY67_01500 PF00171 Aldehyde dehydrogenase family NHY67_01505 PF03447 Homoserine dehydrogenase, NAD binding domain NHY67_01505 PF01958 Domain of unknown function DUF108 NHY67_01515 PF12697 Alpha/beta hydrolase family NHY67_01530 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_01530 PF14759 Reductase C-terminal NHY67_01535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY67_01545 PF00355 Rieske [2Fe-2S] domain NHY67_01555 PF00355 Rieske [2Fe-2S] domain NHY67_01560 PF01614 Bacterial transcriptional regulator NHY67_01560 PF09339 IclR helix-turn-helix domain NHY67_01575 PF00378 Enoyl-CoA hydratase/isomerase NHY67_01590 PF14883 Hypothetical glycosyl hydrolase family 13 NHY67_01590 PF01522 Polysaccharide deacetylase NHY67_01595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY67_01600 PF07152 YaeQ protein NHY67_01610 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY67_01610 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY67_01620 PF03061 Thioesterase superfamily NHY67_01630 PF02028 BCCT, betaine/carnitine/choline family transporter NHY67_01635 PF02028 BCCT, betaine/carnitine/choline family transporter NHY67_01640 PF00440 Bacterial regulatory proteins, tetR family NHY67_01640 PF13977 BetI-type transcriptional repressor, C-terminal NHY67_01650 PF05199 GMC oxidoreductase NHY67_01650 PF00732 GMC oxidoreductase NHY67_01655 PF06039 Malate:quinone oxidoreductase (Mqo) NHY67_01665 PF02574 Homocysteine S-methyltransferase NHY67_01670 PF13520 Amino acid permease NHY67_01695 PF01126 Heme oxygenase NHY67_01715 PF07715 TonB-dependent Receptor Plug Domain NHY67_01715 PF00593 TonB dependent receptor NHY67_01725 PF08281 Sigma-70, region 4 NHY67_01725 PF04542 Sigma-70 region 2 NHY67_01735 PF00701 Dihydrodipicolinate synthetase family NHY67_01740 PF00083 Sugar (and other) transporter NHY67_01760 PF01026 TatD related DNase NHY67_01780 PF07693 KAP family P-loop domain NHY67_01805 PF00436 Single-strand binding protein family NHY67_01860 PF13356 Arm DNA-binding domain NHY67_01860 PF00589 Phage integrase family NHY67_02015 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NHY67_02225 PF01695 IstB-like ATP binding protein NHY67_02235 PF00145 C-5 cytosine-specific DNA methylase NHY67_02315 PF00929 Exonuclease NHY67_02390 PF07690 Major Facilitator Superfamily NHY67_02395 PF13533 Biotin-lipoyl like NHY67_02400 PF03061 Thioesterase superfamily NHY67_02405 PF00490 Delta-aminolevulinic acid dehydratase NHY67_02410 PF01266 FAD dependent oxidoreductase NHY67_02415 PF08338 Domain of unknown function (DUF1731) NHY67_02415 PF01370 NAD dependent epimerase/dehydratase family NHY67_02450 PF00437 Type II/IV secretion system protein NHY67_02455 PF00437 Type II/IV secretion system protein NHY67_02460 PF01475 Ferric uptake regulator family NHY67_02465 PF04355 SmpA / OmlA family NHY67_02470 PF03658 RnfH family Ubiquitin NHY67_02480 PF01814 Hemerythrin HHE cation binding domain NHY67_02500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY67_02500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY67_02500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY67_02500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY67_02505 PF00692 dUTPase NHY67_02515 PF13488 Glycine zipper NHY67_02515 PF00691 OmpA family NHY67_02520 PF01553 Acyltransferase NHY67_02530 PF03775 Septum formation inhibitor MinC, C-terminal domain NHY67_02535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NHY67_02540 PF03776 Septum formation topological specificity factor MinE NHY67_02560 PF01810 LysE type translocator NHY67_02565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NHY67_02565 PF09397 Ftsk gamma domain NHY67_02565 PF01580 FtsK/SpoIIIE family NHY67_02565 PF17854 FtsK alpha domain NHY67_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_02580 PF04376 Arginine-tRNA-protein transferase, N terminus NHY67_02580 PF04377 Arginine-tRNA-protein transferase, C terminus NHY67_02585 PF00583 Acetyltransferase (GNAT) family NHY67_02600 PF00009 Elongation factor Tu GTP binding domain NHY67_02600 PF03144 Elongation factor Tu domain 2 NHY67_02600 PF03143 Elongation factor Tu C-terminal domain NHY67_02605 PF00679 Elongation factor G C-terminus NHY67_02605 PF14492 Elongation Factor G, domain II NHY67_02605 PF03764 Elongation factor G, domain IV NHY67_02605 PF00009 Elongation factor Tu GTP binding domain NHY67_02605 PF03144 Elongation factor Tu domain 2 NHY67_02610 PF00177 Ribosomal protein S7p/S5e NHY67_02615 PF00164 Ribosomal protein S12/S23 NHY67_02625 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY67_02625 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY67_02630 PF03653 Uncharacterised protein family (UPF0093) NHY67_02635 PF02678 Pirin NHY67_02635 PF05726 Pirin C-terminal cupin domain NHY67_02645 PF00795 Carbon-nitrogen hydrolase NHY67_02645 PF02540 NAD synthase NHY67_02660 PF00970 Oxidoreductase FAD-binding domain NHY67_02660 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_02660 PF00175 Oxidoreductase NAD-binding domain NHY67_02665 PF00171 Aldehyde dehydrogenase family NHY67_02670 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY67_02670 PF00355 Rieske [2Fe-2S] domain NHY67_02675 PF07859 alpha/beta hydrolase fold NHY67_02685 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY67_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_02690 PF03466 LysR substrate binding domain NHY67_02710 PF00037 4Fe-4S binding domain NHY67_02715 PF01467 Cytidylyltransferase-like NHY67_02720 PF01668 SmpB protein NHY67_02725 PF03358 NADPH-dependent FMN reductase NHY67_02735 PF00849 RNA pseudouridylate synthase NHY67_02735 PF01479 S4 domain NHY67_02740 PF13525 Outer membrane lipoprotein NHY67_02745 PF08278 DNA primase DnaG DnaB-binding NHY67_02745 PF08275 DNA primase catalytic core, N-terminal domain NHY67_02745 PF10410 DnaB-helicase binding domain of primase NHY67_02745 PF01807 CHC2 zinc finger NHY67_02760 PF03550 Outer membrane lipoprotein LolB NHY67_02765 PF08544 GHMP kinases C terminal NHY67_02765 PF00288 GHMP kinases N terminal domain NHY67_02790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY67_02790 PF14572 Phosphoribosyl synthetase-associated domain NHY67_02795 PF01386 Ribosomal L25p family NHY67_02800 PF01195 Peptidyl-tRNA hydrolase NHY67_02805 PF02261 Aspartate decarboxylase NHY67_02820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY67_02830 PF02581 Thiamine monophosphate synthase NHY67_02830 PF03070 TENA/THI-4/PQQC family NHY67_02830 PF08543 Phosphomethylpyrimidine kinase NHY67_02835 PF01476 LysM domain NHY67_02835 PF04972 BON domain NHY67_02840 PF00550 Phosphopantetheine attachment site NHY67_02850 PF00698 Acyl transferase domain NHY67_02855 PF01783 Ribosomal L32p protein family NHY67_02860 PF02620 Large ribosomal RNA subunit accumulation protein YceD NHY67_02865 PF04315 Elongation factor P hydroxylase NHY67_02870 PF01300 Telomere recombination NHY67_02875 PF02616 Segregation and condensation protein ScpA NHY67_02880 PF04079 Segregation and condensation complex subunit ScpB NHY67_02885 PF00849 RNA pseudouridylate synthase NHY67_02885 PF01479 S4 domain NHY67_02900 PF00155 Aminotransferase class I and II NHY67_02910 PF08241 Methyltransferase domain NHY67_02910 PF12697 Alpha/beta hydrolase family NHY67_02920 PF00982 Glycosyltransferase family 20 NHY67_02930 PF00210 Ferritin-like domain NHY67_02935 PF00533 BRCA1 C Terminus (BRCT) domain NHY67_02935 PF01653 NAD-dependent DNA ligase adenylation domain NHY67_02935 PF03120 NAD-dependent DNA ligase OB-fold domain NHY67_02935 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NHY67_02935 PF12826 Helix-hairpin-helix motif NHY67_02955 PF01925 Sulfite exporter TauE/SafE NHY67_02965 PF03309 Type III pantothenate kinase NHY67_02970 PF02881 SRP54-type protein, helical bundle domain NHY67_02970 PF00448 SRP54-type protein, GTPase domain NHY67_02970 PF02978 Signal peptide binding domain NHY67_02980 PF01207 Dihydrouridine synthase (Dus) NHY67_03010 PF00692 dUTPase NHY67_03025 PF01048 Phosphorylase superfamily NHY67_03030 PF10609 NUBPL iron-transfer P-loop NTPase NHY67_03065 PF13533 Biotin-lipoyl like NHY67_03070 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_03085 PF05552 Conserved TM helix NHY67_03100 PF00970 Oxidoreductase FAD-binding domain NHY67_03100 PF00175 Oxidoreductase NAD-binding domain NHY67_03105 PF03466 LysR substrate binding domain NHY67_03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_03110 PF00313 'Cold-shock' DNA-binding domain NHY67_03120 PF00361 Proton-conducting membrane transporter NHY67_03125 PF00361 Proton-conducting membrane transporter NHY67_03130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NHY67_03130 PF00361 Proton-conducting membrane transporter NHY67_03140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NHY67_03145 PF12838 4Fe-4S dicluster domain NHY67_03150 PF00146 NADH dehydrogenase NHY67_03155 PF00384 Molybdopterin oxidoreductase NHY67_03155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY67_03155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NHY67_03160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NHY67_03160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NHY67_03160 PF10531 SLBB domain NHY67_03170 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NHY67_03170 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NHY67_03175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NHY67_03180 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NHY67_03185 PF17151 Periplasmic sensor domain NHY67_03185 PF00990 Diguanylate cyclase, GGDEF domain NHY67_03195 PF00672 HAMP domain NHY67_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_03195 PF00512 His Kinase A (phospho-acceptor) domain NHY67_03200 PF00486 Transcriptional regulatory protein, C terminal NHY67_03200 PF00072 Response regulator receiver domain NHY67_03210 PF02867 Ribonucleotide reductase, barrel domain NHY67_03210 PF00317 Ribonucleotide reductase, all-alpha domain NHY67_03210 PF03477 ATP cone domain NHY67_03220 PF00268 Ribonucleotide reductase, small chain NHY67_03230 PF00672 HAMP domain NHY67_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_03230 PF00512 His Kinase A (phospho-acceptor) domain NHY67_03230 PF13755 Sensor N-terminal transmembrane domain NHY67_03230 PF13756 Stimulus-sensing domain NHY67_03300 PF01011 PQQ enzyme repeat NHY67_03300 PF13360 PQQ-like domain NHY67_03325 PF02567 Phenazine biosynthesis-like protein NHY67_03350 PF01613 Flavin reductase like domain NHY67_03355 PF08267 Cobalamin-independent synthase, N-terminal domain NHY67_03355 PF01717 Cobalamin-independent synthase, Catalytic domain NHY67_03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_03365 PF03466 LysR substrate binding domain NHY67_03370 PF01810 LysE type translocator NHY67_03380 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NHY67_03380 PF12833 Helix-turn-helix domain NHY67_03385 PF07687 Peptidase dimerisation domain NHY67_03385 PF01546 Peptidase family M20/M25/M40 NHY67_03395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_03395 PF03466 LysR substrate binding domain NHY67_03400 PF07690 Major Facilitator Superfamily NHY67_03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_03410 PF03466 LysR substrate binding domain NHY67_03415 PF00890 FAD binding domain NHY67_03415 PF14537 Cytochrome c3 NHY67_03425 PF02515 CoA-transferase family III NHY67_03430 PF07690 Major Facilitator Superfamily NHY67_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_03440 PF03466 LysR substrate binding domain NHY67_03445 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_03445 PF00107 Zinc-binding dehydrogenase NHY67_03450 PF00962 Adenosine/AMP deaminase NHY67_03475 PF02445 Quinolinate synthetase A protein NHY67_03480 PF01960 ArgJ family NHY67_03485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY67_03485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY67_03490 PF00893 Small Multidrug Resistance protein NHY67_03500 PF05275 Copper resistance protein B precursor (CopB) NHY67_03520 PF00834 Ribulose-phosphate 3 epimerase family NHY67_03530 PF00756 Putative esterase NHY67_03540 PF04445 Putative SAM-dependent methyltransferase NHY67_03545 PF00814 Glycoprotease family NHY67_03550 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_03555 PF00293 NUDIX domain NHY67_03595 PF00425 chorismate binding enzyme NHY67_03595 PF04715 Anthranilate synthase component I, N terminal region NHY67_03600 PF00155 Aminotransferase class I and II NHY67_03610 PF01634 ATP phosphoribosyltransferase NHY67_03615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY67_03620 PF01722 BolA-like protein NHY67_03675 PF00795 Carbon-nitrogen hydrolase NHY67_03685 PF01047 MarR family NHY67_03690 PF02566 OsmC-like protein NHY67_03695 PF00437 Type II/IV secretion system protein NHY67_03725 PF01612 3'-5' exonuclease NHY67_03725 PF00476 DNA polymerase family A NHY67_03725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NHY67_03725 PF01367 5'-3' exonuclease, C-terminal SAM fold NHY67_03730 PF02325 YGGT family NHY67_03735 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY67_03735 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY67_03740 PF01171 PP-loop family NHY67_03740 PF09179 TilS substrate binding domain NHY67_03740 PF11734 TilS substrate C-terminal domain NHY67_03745 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NHY67_03755 PF00085 Thioredoxin NHY67_03760 PF07497 Rho termination factor, RNA-binding domain NHY67_03760 PF07498 Rho termination factor, N-terminal domain NHY67_03760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY67_03775 PF00216 Bacterial DNA-binding protein NHY67_03780 PF01588 Putative tRNA binding domain NHY67_03780 PF03484 tRNA synthetase B5 domain NHY67_03780 PF03147 Ferredoxin-fold anticodon binding domain NHY67_03780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NHY67_03780 PF03483 B3/4 domain NHY67_03785 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NHY67_03785 PF01409 tRNA synthetases class II core domain (F) NHY67_03805 PF00453 Ribosomal protein L20 NHY67_03810 PF01632 Ribosomal protein L35 NHY67_03820 PF07690 Major Facilitator Superfamily NHY67_03825 PF09335 SNARE associated Golgi protein NHY67_03830 PF02798 Glutathione S-transferase, N-terminal domain NHY67_03830 PF00043 Glutathione S-transferase, C-terminal domain NHY67_03835 PF00707 Translation initiation factor IF-3, C-terminal domain NHY67_03835 PF05198 Translation initiation factor IF-3, N-terminal domain NHY67_03840 PF03129 Anticodon binding domain NHY67_03840 PF02824 TGS domain NHY67_03840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY67_03840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY67_03845 PF00501 AMP-binding enzyme NHY67_03845 PF13193 AMP-binding enzyme C-terminal domain NHY67_03850 PF04751 Protein of unknown function (DUF615) NHY67_03855 PF00381 PTS HPr component phosphorylation site NHY67_03860 PF03668 P-loop ATPase protein family NHY67_03865 PF02569 Pantoate-beta-alanine ligase NHY67_03870 PF02548 Ketopantoate hydroxymethyltransferase NHY67_03875 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NHY67_03880 PF01743 Poly A polymerase head domain NHY67_03880 PF12626 Polymerase A arginine-rich C-terminus NHY67_03880 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY67_03890 PF03819 MazG nucleotide pyrophosphohydrolase domain NHY67_03905 PF05958 tRNA (Uracil-5-)-methyltransferase NHY67_03915 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_03920 PF00512 His Kinase A (phospho-acceptor) domain NHY67_03920 PF01627 Hpt domain NHY67_03920 PF00072 Response regulator receiver domain NHY67_03920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NHY67_03920 PF00672 HAMP domain NHY67_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_03925 PF00378 Enoyl-CoA hydratase/isomerase NHY67_03930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY67_03930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY67_03935 PF01261 Xylose isomerase-like TIM barrel NHY67_03950 PF02233 NAD(P) transhydrogenase beta subunit NHY67_03955 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NHY67_03960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NHY67_03960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NHY67_03965 PF00892 EamA-like transporter family NHY67_03975 PF07690 Major Facilitator Superfamily NHY67_03980 PF01207 Dihydrouridine synthase (Dus) NHY67_03990 PF03466 LysR substrate binding domain NHY67_03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_04000 PF00899 ThiF family NHY67_04010 PF00330 Aconitase family (aconitate hydratase) NHY67_04010 PF00694 Aconitase C-terminal domain NHY67_04015 PF01026 TatD related DNase NHY67_04030 PF03144 Elongation factor Tu domain 2 NHY67_04030 PF16658 Class II release factor RF3, C-terminal domain NHY67_04030 PF00009 Elongation factor Tu GTP binding domain NHY67_04050 PF00563 EAL domain NHY67_04050 PF00990 Diguanylate cyclase, GGDEF domain NHY67_04050 PF03707 Bacterial signalling protein N terminal repeat NHY67_04055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NHY67_04055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NHY67_04060 PF10369 Small subunit of acetolactate synthase NHY67_04065 PF00205 Thiamine pyrophosphate enzyme, central domain NHY67_04065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY67_04065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY67_04075 PF08264 Anticodon-binding domain of tRNA NHY67_04075 PF00133 tRNA synthetases class I (I, L, M and V) NHY67_04075 PF13603 Leucyl-tRNA synthetase, Domain 2 NHY67_04075 PF09334 tRNA synthetases class I (M) NHY67_04095 PF00005 ABC transporter NHY67_04095 PF12704 MacB-like periplasmic core domain NHY67_04095 PF02687 FtsX-like permease family NHY67_04100 PF02321 Outer membrane efflux protein NHY67_04115 PF00929 Exonuclease NHY67_04120 PF03193 RsgA GTPase NHY67_04130 PF00462 Glutaredoxin NHY67_04135 PF02556 Preprotein translocase subunit SecB NHY67_04165 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY67_04165 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY67_04175 PF04820 Tryptophan halogenase NHY67_04195 PF00221 Aromatic amino acid lyase NHY67_04210 PF00501 AMP-binding enzyme NHY67_04210 PF13193 AMP-binding enzyme C-terminal domain NHY67_04220 PF00550 Phosphopantetheine attachment site NHY67_04225 PF00550 Phosphopantetheine attachment site NHY67_04240 PF01926 50S ribosome-binding GTPase NHY67_04240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NHY67_04255 PF03129 Anticodon binding domain NHY67_04255 PF13393 Histidyl-tRNA synthetase NHY67_04260 PF04551 GcpE protein NHY67_04280 PF00334 Nucleoside diphosphate kinase NHY67_04285 PF04384 Iron-sulphur cluster assembly NHY67_04290 PF01569 PAP2 superfamily NHY67_04295 PF00534 Glycosyl transferases group 1 NHY67_04295 PF13439 Glycosyltransferase Family 4 NHY67_04300 PF00595 PDZ domain NHY67_04300 PF17804 Tail specific protease N-terminal domain NHY67_04300 PF03572 Peptidase family S41 NHY67_04300 PF11818 C-terminal domain of tail specific protease (DUF3340) NHY67_04315 PF00561 alpha/beta hydrolase fold NHY67_04320 PF00171 Aldehyde dehydrogenase family NHY67_04325 PF00171 Aldehyde dehydrogenase family NHY67_04330 PF01202 Shikimate kinase NHY67_04340 PF01081 KDPG and KHG aldolase NHY67_04345 PF00920 Dehydratase family NHY67_04355 PF00871 Acetokinase family NHY67_04365 PF05681 Fumarate hydratase (Fumerase) NHY67_04365 PF05683 Fumarase C-terminus NHY67_04385 PF00574 Clp protease NHY67_04390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY67_04390 PF05697 Bacterial trigger factor protein (TF) NHY67_04390 PF05698 Bacterial trigger factor protein (TF) C-terminus NHY67_04395 PF07715 TonB-dependent Receptor Plug Domain NHY67_04395 PF00593 TonB dependent receptor NHY67_04405 PF00682 HMGL-like NHY67_04405 PF08502 LeuA allosteric (dimerisation) domain NHY67_04410 PF00561 alpha/beta hydrolase fold NHY67_04415 PF00561 alpha/beta hydrolase fold NHY67_04415 PF07021 Methionine biosynthesis protein MetW NHY67_04435 PF02416 mttA/Hcf106 family NHY67_04440 PF02416 mttA/Hcf106 family NHY67_04445 PF00902 Sec-independent protein translocase protein (TatC) NHY67_04485 PF00186 Dihydrofolate reductase NHY67_04495 PF01625 Peptide methionine sulfoxide reductase NHY67_04505 PF01618 MotA/TolQ/ExbB proton channel family NHY67_04515 PF00551 Formyl transferase NHY67_04515 PF01842 ACT domain NHY67_04525 PF00171 Aldehyde dehydrogenase family NHY67_04530 PF00830 Ribosomal L28 family NHY67_04535 PF00471 Ribosomal protein L33 NHY67_04540 PF00999 Sodium/hydrogen exchanger family NHY67_04540 PF02254 TrkA-N domain NHY67_04560 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NHY67_04565 PF00580 UvrD/REP helicase N-terminal domain NHY67_04565 PF13361 UvrD-like helicase C-terminal domain NHY67_04590 PF01638 HxlR-like helix-turn-helix NHY67_04595 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_04595 PF00107 Zinc-binding dehydrogenase NHY67_04600 PF04102 SlyX NHY67_04615 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY67_04625 PF00375 Sodium:dicarboxylate symporter family NHY67_04635 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY67_04635 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY67_04655 PF01416 tRNA pseudouridine synthase NHY67_04665 PF01176 Translation initiation factor 1A / IF-1 NHY67_04690 PF00694 Aconitase C-terminal domain NHY67_04695 PF00330 Aconitase family (aconitate hydratase) NHY67_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_04705 PF03466 LysR substrate binding domain NHY67_04725 PF00293 NUDIX domain NHY67_04730 PF00391 PEP-utilising enzyme, mobile domain NHY67_04730 PF02896 PEP-utilising enzyme, TIM barrel domain NHY67_04730 PF05524 PEP-utilising enzyme, N-terminal NHY67_04730 PF01590 GAF domain NHY67_04735 PF00141 Peroxidase NHY67_04745 PF03466 LysR substrate binding domain NHY67_04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_04755 PF02798 Glutathione S-transferase, N-terminal domain NHY67_04760 PF13280 WYL domain NHY67_04760 PF08279 HTH domain NHY67_04765 PF13419 Haloacid dehalogenase-like hydrolase NHY67_04770 PF01479 S4 domain NHY67_04770 PF00849 RNA pseudouridylate synthase NHY67_04775 PF10150 Ribonuclease E/G family NHY67_04775 PF12111 Polyribonucleotide phosphorylase C terminal NHY67_04775 PF00575 S1 RNA binding domain NHY67_04800 PF00106 short chain dehydrogenase NHY67_04805 PF06969 HemN C-terminal domain NHY67_04805 PF04055 Radical SAM superfamily NHY67_04815 PF01554 MatE NHY67_04820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_04820 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_04820 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY67_04825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_04825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY67_04830 PF03109 ABC1 family NHY67_04835 PF01197 Ribosomal protein L31 NHY67_04850 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NHY67_04870 PF03884 DNA gyrase inhibitor YacG NHY67_04875 PF00753 Metallo-beta-lactamase superfamily NHY67_04880 PF00762 Ferrochelatase NHY67_04890 PF01177 Asp/Glu/Hydantoin racemase NHY67_04905 PF01206 Sulfurtransferase TusA NHY67_04910 PF00571 CBS domain NHY67_04910 PF03471 Transporter associated domain NHY67_04915 PF00795 Carbon-nitrogen hydrolase NHY67_04920 PF01588 Putative tRNA binding domain NHY67_04930 PF08334 Type II secretion system (T2SS), protein G NHY67_04930 PF07963 Prokaryotic N-terminal methylation motif NHY67_04935 PF00482 Type II secretion system (T2SS), protein F NHY67_04945 PF00999 Sodium/hydrogen exchanger family NHY67_04945 PF02254 TrkA-N domain NHY67_04950 PF01430 Hsp33 protein NHY67_04960 PF00226 DnaJ domain NHY67_04960 PF01556 DnaJ C terminal domain NHY67_04980 PF00312 Ribosomal protein S15 NHY67_04985 PF00144 Beta-lactamase NHY67_04990 PF13538 UvrD-like helicase C-terminal domain NHY67_05030 PF03109 ABC1 family NHY67_05035 PF01494 FAD binding domain NHY67_05040 PF01502 Phosphoribosyl-AMP cyclohydrolase NHY67_05055 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NHY67_05055 PF00361 Proton-conducting membrane transporter NHY67_05055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NHY67_05055 PF13244 Domain of unknown function (DUF4040) NHY67_05060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY67_05065 PF00361 Proton-conducting membrane transporter NHY67_05070 PF01899 Na+/H+ ion antiporter subunit NHY67_05075 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NHY67_05080 PF03334 Na+/H+ antiporter subunit NHY67_05085 PF02033 Ribosome-binding factor A NHY67_05100 PF17384 RimP C-terminal SH3 domain NHY67_05100 PF02576 RimP N-terminal domain NHY67_05120 PF03840 Preprotein translocase SecG subunit NHY67_05125 PF00121 Triosephosphate isomerase NHY67_05135 PF00482 Type II secretion system (T2SS), protein F NHY67_05145 PF06750 Bacterial Peptidase A24 N-terminal domain NHY67_05145 PF01478 Type IV leader peptidase family NHY67_05150 PF01121 Dephospho-CoA kinase NHY67_05160 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY67_05160 PF00588 SpoU rRNA Methylase family NHY67_05165 PF06865 Pyrimidine/purine nucleoside phosphorylase NHY67_05175 PF02463 RecF/RecN/SMC N terminal domain NHY67_05180 PF02622 Uncharacterized ACR, COG1678 NHY67_05185 PF03652 Holliday junction resolvase NHY67_05215 PF12833 Helix-turn-helix domain NHY67_05215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY67_05215 PF02805 Metal binding domain of Ada NHY67_05215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY67_05220 PF01066 CDP-alcohol phosphatidyltransferase NHY67_05255 PF00108 Thiolase, N-terminal domain NHY67_05255 PF02803 Thiolase, C-terminal domain NHY67_05275 PF09278 MerR, DNA binding NHY67_05275 PF00376 MerR family regulatory protein NHY67_05285 PF01323 DSBA-like thioredoxin domain NHY67_05300 PF00183 Hsp90 protein NHY67_05300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_05315 PF13726 Na+-H+ antiporter family NHY67_05315 PF03553 Na+/H+ antiporter family NHY67_05345 PF04565 RNA polymerase Rpb2, domain 3 NHY67_05345 PF10385 RNA polymerase beta subunit external 1 domain NHY67_05345 PF00562 RNA polymerase Rpb2, domain 6 NHY67_05345 PF04560 RNA polymerase Rpb2, domain 7 NHY67_05345 PF04563 RNA polymerase beta subunit NHY67_05345 PF04561 RNA polymerase Rpb2, domain 2 NHY67_05350 PF00542 Ribosomal protein L7/L12 C-terminal domain NHY67_05350 PF16320 Ribosomal protein L7/L12 dimerisation domain NHY67_05355 PF00466 Ribosomal protein L10 NHY67_05360 PF00687 Ribosomal protein L1p/L10e family NHY67_05365 PF03946 Ribosomal protein L11, N-terminal domain NHY67_05365 PF00298 Ribosomal protein L11, RNA binding domain NHY67_05370 PF02357 Transcription termination factor nusG NHY67_05370 PF00467 KOW motif NHY67_05375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NHY67_05385 PF03143 Elongation factor Tu C-terminal domain NHY67_05385 PF03144 Elongation factor Tu domain 2 NHY67_05385 PF00009 Elongation factor Tu GTP binding domain NHY67_05410 PF00425 chorismate binding enzyme NHY67_05410 PF04715 Anthranilate synthase component I, N terminal region NHY67_05415 PF13419 Haloacid dehalogenase-like hydrolase NHY67_05420 PF00498 FHA domain NHY67_05420 PF12401 Protein of unknown function (DUF2662) NHY67_05425 PF03958 Bacterial type II/III secretion system short domain NHY67_05425 PF00263 Bacterial type II and III secretion system protein NHY67_05465 PF03900 Porphobilinogen deaminase, C-terminal domain NHY67_05465 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NHY67_05470 PF04397 LytTr DNA-binding domain NHY67_05470 PF00072 Response regulator receiver domain NHY67_05475 PF06580 Histidine kinase NHY67_05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_05475 PF07694 5TMR of 5TMR-LYT NHY67_05480 PF00206 Lyase NHY67_05480 PF14698 Argininosuccinate lyase C-terminal NHY67_05485 PF04362 Bacterial Fe(2+) trafficking NHY67_05490 PF01895 PhoU domain NHY67_05515 PF13667 ThiC-associated domain NHY67_05515 PF01964 Radical SAM ThiC family NHY67_05520 PF00293 NUDIX domain NHY67_05530 PF01258 Prokaryotic dksA/traR C4-type zinc finger NHY67_05535 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY67_05555 PF07664 Ferrous iron transport protein B C terminus NHY67_05555 PF02421 Ferrous iron transport protein B NHY67_05555 PF07670 Nucleoside recognition NHY67_05565 PF02899 Phage integrase, N-terminal SAM-like domain NHY67_05565 PF00589 Phage integrase family NHY67_05570 PF10411 Disulfide bond isomerase protein N-terminus NHY67_05570 PF13098 Thioredoxin-like domain NHY67_05580 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_05585 PF00768 D-alanyl-D-alanine carboxypeptidase NHY67_05590 PF00196 Bacterial regulatory proteins, luxR family NHY67_05590 PF00072 Response regulator receiver domain NHY67_05595 PF00512 His Kinase A (phospho-acceptor) domain NHY67_05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_05600 PF02954 Bacterial regulatory protein, Fis family NHY67_05600 PF00072 Response regulator receiver domain NHY67_05600 PF00158 Sigma-54 interaction domain NHY67_05605 PF00595 PDZ domain NHY67_05605 PF03572 Peptidase family S41 NHY67_05645 PF00677 Lumazine binding domain NHY67_05655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY67_05655 PF01872 RibD C-terminal domain NHY67_05660 PF03477 ATP cone domain NHY67_05665 PF00909 Ammonium Transporter Family NHY67_05670 PF00543 Nitrogen regulatory protein P-II NHY67_05690 PF01636 Phosphotransferase enzyme family NHY67_05695 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NHY67_05715 PF00440 Bacterial regulatory proteins, tetR family NHY67_05715 PF02909 Tetracyclin repressor-like, C-terminal domain NHY67_05720 PF07690 Major Facilitator Superfamily NHY67_05760 PF01740 STAS domain NHY67_05760 PF00916 Sulfate permease family NHY67_05765 PF00582 Universal stress protein family NHY67_05795 PF00665 Integrase core domain NHY67_05815 PF00701 Dihydrodipicolinate synthetase family NHY67_05830 PF03573 outer membrane porin, OprD family NHY67_05835 PF00719 Inorganic pyrophosphatase NHY67_05855 PF03989 DNA gyrase C-terminal domain, beta-propeller NHY67_05855 PF00521 DNA gyrase/topoisomerase IV, subunit A NHY67_05860 PF07690 Major Facilitator Superfamily NHY67_05865 PF03458 UPF0126 domain NHY67_05875 PF03741 Integral membrane protein TerC family NHY67_05875 PF03471 Transporter associated domain NHY67_05880 PF03641 Possible lysine decarboxylase NHY67_05895 PF00817 impB/mucB/samB family NHY67_05895 PF11799 impB/mucB/samB family C-terminal domain NHY67_05895 PF11798 IMS family HHH motif NHY67_05935 PF03358 NADPH-dependent FMN reductase NHY67_05945 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_06005 PF01327 Polypeptide deformylase NHY67_06020 PF01300 Telomere recombination NHY67_06030 PF00440 Bacterial regulatory proteins, tetR family NHY67_06035 PF07690 Major Facilitator Superfamily NHY67_06045 PF00255 Glutathione peroxidase NHY67_06060 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY67_06060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY67_06065 PF00231 ATP synthase NHY67_06075 PF00213 ATP synthase delta (OSCP) subunit NHY67_06080 PF00430 ATP synthase B/B' CF(0) NHY67_06085 PF00137 ATP synthase subunit C NHY67_06090 PF00119 ATP synthase A chain NHY67_06110 PF00005 ABC transporter NHY67_06115 PF00950 ABC 3 transport family NHY67_06120 PF01810 LysE type translocator NHY67_06125 PF04261 Dyp-type peroxidase family NHY67_06135 PF03949 Malic enzyme, NAD binding domain NHY67_06135 PF00390 Malic enzyme, N-terminal domain NHY67_06140 PF03485 Arginyl tRNA synthetase N terminal domain NHY67_06140 PF05746 DALR anticodon binding domain NHY67_06140 PF00750 tRNA synthetases class I (R) NHY67_06170 PF03551 Transcriptional regulator PadR-like family NHY67_06175 PF13427 Domain of unknown function (DUF4111) NHY67_06175 PF01909 Nucleotidyltransferase domain NHY67_06180 PF00958 GMP synthase C terminal domain NHY67_06180 PF00117 Glutamine amidotransferase class-I NHY67_06180 PF02540 NAD synthase NHY67_06185 PF04286 Protein of unknown function (DUF445) NHY67_06190 PF07681 DoxX NHY67_06195 PF09335 SNARE associated Golgi protein NHY67_06210 PF13614 AAA domain NHY67_06220 PF01722 BolA-like protein NHY67_06240 PF12697 Alpha/beta hydrolase family NHY67_06260 PF00975 Thioesterase domain NHY67_06260 PF08242 Methyltransferase domain NHY67_06260 PF00550 Phosphopantetheine attachment site NHY67_06260 PF16197 Ketoacyl-synthetase C-terminal extension NHY67_06260 PF14765 Polyketide synthase dehydratase NHY67_06260 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY67_06260 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY67_06270 PF00501 AMP-binding enzyme NHY67_06280 PF00196 Bacterial regulatory proteins, luxR family NHY67_06280 PF03472 Autoinducer binding domain NHY67_06290 PF00765 Autoinducer synthase NHY67_06295 PF07690 Major Facilitator Superfamily NHY67_06295 PF00083 Sugar (and other) transporter NHY67_06300 PF00378 Enoyl-CoA hydratase/isomerase NHY67_06310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_06310 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_06310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_06315 PF00501 AMP-binding enzyme NHY67_06315 PF13193 AMP-binding enzyme C-terminal domain NHY67_06320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY67_06320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY67_06335 PF00324 Amino acid permease NHY67_06340 PF00324 Amino acid permease NHY67_06345 PF01042 Endoribonuclease L-PSP NHY67_06350 PF00842 Alanine racemase, C-terminal domain NHY67_06350 PF01168 Alanine racemase, N-terminal domain NHY67_06355 PF01266 FAD dependent oxidoreductase NHY67_06360 PF01037 Lrp/AsnC ligand binding domain NHY67_06370 PF07715 TonB-dependent Receptor Plug Domain NHY67_06370 PF00593 TonB dependent receptor NHY67_06385 PF00849 RNA pseudouridylate synthase NHY67_06400 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY67_06400 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY67_06420 PF00293 NUDIX domain NHY67_06440 PF00330 Aconitase family (aconitate hydratase) NHY67_06440 PF00694 Aconitase C-terminal domain NHY67_06445 PF00285 Citrate synthase, C-terminal domain NHY67_06455 PF07729 FCD domain NHY67_06455 PF00392 Bacterial regulatory proteins, gntR family NHY67_06470 PF09330 D-lactate dehydrogenase, membrane binding NHY67_06470 PF01565 FAD binding domain NHY67_06475 PF01070 FMN-dependent dehydrogenase NHY67_06485 PF02652 L-lactate permease NHY67_06495 PF16363 GDP-mannose 4,6 dehydratase NHY67_06500 PF00342 Phosphoglucose isomerase NHY67_06505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY67_06505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY67_06505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY67_06510 PF00483 Nucleotidyl transferase NHY67_06515 PF02397 Bacterial sugar transferase NHY67_06535 PF07922 Glycosyltransferase family 52 NHY67_06540 PF01943 Polysaccharide biosynthesis protein NHY67_06560 PF02348 Cytidylyltransferase NHY67_06565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NHY67_06575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY67_06575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY67_06575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY67_06580 PF02563 Polysaccharide biosynthesis/export protein NHY67_06580 PF10531 SLBB domain NHY67_06580 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NHY67_06585 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY67_06590 PF13614 AAA domain NHY67_06590 PF13807 G-rich domain on putative tyrosine kinase NHY67_06590 PF02706 Chain length determinant protein NHY67_06595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY67_06595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY67_06605 PF03023 Lipid II flippase MurJ NHY67_06610 PF01510 N-acetylmuramoyl-L-alanine amidase NHY67_06625 PF05506 Domain of unknown function (DUF756) NHY67_06625 PF04185 Phosphoesterase family NHY67_06635 PF01138 3' exoribonuclease family, domain 1 NHY67_06635 PF03725 3' exoribonuclease family, domain 2 NHY67_06640 PF00487 Fatty acid desaturase NHY67_06645 PF00175 Oxidoreductase NAD-binding domain NHY67_06650 PF00440 Bacterial regulatory proteins, tetR family NHY67_06660 PF01323 DSBA-like thioredoxin domain NHY67_06670 PF13419 Haloacid dehalogenase-like hydrolase NHY67_06675 PF00106 short chain dehydrogenase NHY67_06690 PF00696 Amino acid kinase family NHY67_06690 PF00583 Acetyltransferase (GNAT) family NHY67_06695 PF09084 NMT1/THI5 like NHY67_06700 PF09084 NMT1/THI5 like NHY67_06705 PF00296 Luciferase-like monooxygenase NHY67_06715 PF00005 ABC transporter NHY67_06720 PF08362 YcdC-like protein, C-terminal region NHY67_06720 PF00440 Bacterial regulatory proteins, tetR family NHY67_06740 PF08264 Anticodon-binding domain of tRNA NHY67_06740 PF00133 tRNA synthetases class I (I, L, M and V) NHY67_06740 PF06827 Zinc finger found in FPG and IleRS NHY67_06745 PF01252 Signal peptidase (SPase) II NHY67_06750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY67_06790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY67_06795 PF07859 alpha/beta hydrolase fold NHY67_06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_06815 PF03466 LysR substrate binding domain NHY67_06820 PF01025 GrpE NHY67_06825 PF00012 Hsp70 protein NHY67_06845 PF13406 Transglycosylase SLT domain NHY67_06850 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NHY67_06850 PF02222 ATP-grasp domain NHY67_06855 PF00731 AIR carboxylase NHY67_06865 PF01225 Mur ligase family, catalytic domain NHY67_06865 PF02875 Mur ligase family, glutamate ligase domain NHY67_06865 PF08245 Mur ligase middle domain NHY67_06880 PF03741 Integral membrane protein TerC family NHY67_06895 PF00355 Rieske [2Fe-2S] domain NHY67_06915 PF10411 Disulfide bond isomerase protein N-terminus NHY67_06915 PF13098 Thioredoxin-like domain NHY67_06920 PF01545 Cation efflux family NHY67_06920 PF16916 Dimerisation domain of Zinc Transporter NHY67_06925 PF02583 Metal-sensitive transcriptional repressor NHY67_06930 PF01926 50S ribosome-binding GTPase NHY67_06930 PF12631 MnmE helical domain NHY67_06930 PF10396 GTP-binding protein TrmE N-terminus NHY67_06940 PF01809 Putative membrane protein insertion efficiency factor NHY67_06945 PF00825 Ribonuclease P NHY67_06950 PF00468 Ribosomal protein L34 NHY67_06955 PF00308 Bacterial dnaA protein NHY67_06955 PF11638 DnaA N-terminal domain NHY67_06955 PF08299 Bacterial dnaA protein helix-turn-helix NHY67_06960 PF02768 DNA polymerase III beta subunit, C-terminal domain NHY67_06960 PF02767 DNA polymerase III beta subunit, central domain NHY67_06960 PF00712 DNA polymerase III beta subunit, N-terminal domain NHY67_06965 PF02463 RecF/RecN/SMC N terminal domain NHY67_06970 PF18053 DNA gyrase B subunit insert domain NHY67_06970 PF00204 DNA gyrase B NHY67_06970 PF01751 Toprim domain NHY67_06970 PF00986 DNA gyrase B subunit, carboxyl terminus NHY67_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_06975 PF00204 DNA gyrase B NHY67_06975 PF00986 DNA gyrase B subunit, carboxyl terminus NHY67_06975 PF18053 DNA gyrase B subunit insert domain NHY67_06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_06975 PF01751 Toprim domain NHY67_06985 PF09335 SNARE associated Golgi protein NHY67_06990 PF00005 ABC transporter NHY67_06990 PF12848 ABC transporter NHY67_07010 PF01521 Iron-sulphur cluster biosynthesis NHY67_07015 PF00561 alpha/beta hydrolase fold NHY67_07020 PF03702 Anhydro-N-acetylmuramic acid kinase NHY67_07065 PF00209 Sodium:neurotransmitter symporter family NHY67_07075 PF01029 NusB family NHY67_07075 PF01189 16S rRNA methyltransferase RsmB/F NHY67_07080 PF00551 Formyl transferase NHY67_07080 PF02911 Formyl transferase, C-terminal domain NHY67_07085 PF00920 Dehydratase family NHY67_07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_07100 PF03466 LysR substrate binding domain NHY67_07105 PF00860 Permease family NHY67_07110 PF00311 Phosphoenolpyruvate carboxylase NHY67_07115 PF08361 MAATS-type transcriptional repressor, C-terminal region NHY67_07115 PF00440 Bacterial regulatory proteins, tetR family NHY67_07120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY67_07135 PF00226 DnaJ domain NHY67_07135 PF01556 DnaJ C terminal domain NHY67_07135 PF00684 DnaJ central domain NHY67_07145 PF01113 Dihydrodipicolinate reductase, N-terminus NHY67_07145 PF05173 Dihydrodipicolinate reductase, C-terminus NHY67_07155 PF07690 Major Facilitator Superfamily NHY67_07160 PF00248 Aldo/keto reductase family NHY67_07165 PF03466 LysR substrate binding domain NHY67_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_07180 PF00155 Aminotransferase class I and II NHY67_07180 PF00392 Bacterial regulatory proteins, gntR family NHY67_07185 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_07185 PF00107 Zinc-binding dehydrogenase NHY67_07190 PF03352 Methyladenine glycosylase NHY67_07205 PF00633 Helix-hairpin-helix motif NHY67_07205 PF10576 Iron-sulfur binding domain of endonuclease III NHY67_07205 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY67_07205 PF14815 NUDIX domain NHY67_07220 PF07043 Protein of unknown function (DUF1328) NHY67_07230 PF03692 Putative zinc- or iron-chelating domain NHY67_07235 PF07995 Glucose / Sorbosone dehydrogenase NHY67_07245 PF01226 Formate/nitrite transporter NHY67_07255 PF01259 SAICAR synthetase NHY67_07265 PF00701 Dihydrodipicolinate synthetase family NHY67_07270 PF00857 Isochorismatase family NHY67_07275 PF01758 Sodium Bile acid symporter family NHY67_07280 PF01554 MatE NHY67_07285 PF04463 Protein of unknown function (DUF523) NHY67_07290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY67_07305 PF14497 Glutathione S-transferase, C-terminal domain NHY67_07305 PF02798 Glutathione S-transferase, N-terminal domain NHY67_07315 PF00324 Amino acid permease NHY67_07325 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY67_07325 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY67_07335 PF07702 UTRA domain NHY67_07335 PF00392 Bacterial regulatory proteins, gntR family NHY67_07340 PF05962 HutD NHY67_07345 PF17391 Urocanase N-terminal domain NHY67_07345 PF17392 Urocanase C-terminal domain NHY67_07345 PF01175 Urocanase Rossmann-like domain NHY67_07350 PF00221 Aromatic amino acid lyase NHY67_07355 PF00324 Amino acid permease NHY67_07365 PF00491 Arginase family NHY67_07375 PF13419 Haloacid dehalogenase-like hydrolase NHY67_07380 PF01177 Asp/Glu/Hydantoin racemase NHY67_07385 PF01380 SIS domain NHY67_07390 PF12804 MobA-like NTP transferase domain NHY67_07390 PF14602 Hexapeptide repeat of succinyl-transferase NHY67_07390 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_07395 PF04608 Phosphatidylglycerophosphatase A NHY67_07400 PF00586 AIR synthase related protein, N-terminal domain NHY67_07400 PF02769 AIR synthase related protein, C-terminal domain NHY67_07405 PF01029 NusB family NHY67_07410 PF00885 6,7-dimethyl-8-ribityllumazine synthase NHY67_07440 PF02580 D-Tyr-tRNA(Tyr) deacylase NHY67_07445 PF00199 Catalase NHY67_07445 PF06628 Catalase-related immune-responsive NHY67_07455 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY67_07455 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NHY67_07460 PF00581 Rhodanese-like domain NHY67_07465 PF02666 Phosphatidylserine decarboxylase NHY67_07470 PF03069 Acetamidase/Formamidase family NHY67_07485 PF00989 PAS fold NHY67_07485 PF00512 His Kinase A (phospho-acceptor) domain NHY67_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_07485 PF11808 Phosphate regulon sensor protein PhoR NHY67_07490 PF00072 Response regulator receiver domain NHY67_07490 PF00486 Transcriptional regulatory protein, C terminal NHY67_07505 PF01554 MatE NHY67_07510 PF00155 Aminotransferase class I and II NHY67_07515 PF04286 Protein of unknown function (DUF445) NHY67_07530 PF04262 Glutamate-cysteine ligase NHY67_07535 PF02600 Disulfide bond formation protein DsbB NHY67_07540 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY67_07540 PF13296 Putative type VI secretion system Rhs element Vgr NHY67_07540 PF04717 Type VI secretion system, phage-baseplate injector NHY67_07575 PF05728 Uncharacterised protein family (UPF0227) NHY67_07585 PF04115 Ureidoglycolate lyase NHY67_07590 PF03561 Allantoicase repeat NHY67_07595 PF01494 FAD binding domain NHY67_07605 PF00860 Permease family NHY67_07610 PF00576 HIUase/Transthyretin family NHY67_07640 PF02683 Cytochrome C biogenesis protein transmembrane region NHY67_07640 PF11412 Disulphide bond corrector protein DsbC NHY67_07650 PF07859 alpha/beta hydrolase fold NHY67_07665 PF03372 Endonuclease/Exonuclease/phosphatase family NHY67_07670 PF00156 Phosphoribosyl transferase domain NHY67_07685 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NHY67_07685 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NHY67_07690 PF04101 Glycosyltransferase family 28 C-terminal domain NHY67_07690 PF03033 Glycosyltransferase family 28 N-terminal domain NHY67_07695 PF08245 Mur ligase middle domain NHY67_07695 PF02875 Mur ligase family, glutamate ligase domain NHY67_07695 PF01225 Mur ligase family, catalytic domain NHY67_07700 PF01820 D-ala D-ala ligase N-terminus NHY67_07700 PF07478 D-ala D-ala ligase C-terminus NHY67_07705 PF03799 Cell division protein FtsQ NHY67_07705 PF08478 POTRA domain, FtsQ-type NHY67_07710 PF02491 SHS2 domain inserted in FTSA NHY67_07715 PF12327 FtsZ family, C-terminal domain NHY67_07715 PF00091 Tubulin/FtsZ family, GTPase domain NHY67_07720 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NHY67_07730 PF01551 Peptidase family M23 NHY67_07735 PF17831 Pyruvate dehydrogenase E1 component middle domain NHY67_07735 PF00456 Transketolase, thiamine diphosphate binding domain NHY67_07740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY67_07740 PF00364 Biotin-requiring enzyme NHY67_07740 PF02817 e3 binding domain NHY67_07750 PF01169 Uncharacterized protein family UPF0016 NHY67_07765 PF00258 Flavodoxin NHY67_07765 PF01613 Flavin reductase like domain NHY67_07770 PF03692 Putative zinc- or iron-chelating domain NHY67_07775 PF00571 CBS domain NHY67_07775 PF00478 IMP dehydrogenase / GMP reductase domain NHY67_07780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY67_07780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY67_07780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY67_07780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY67_07785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NHY67_07785 PF01243 Pyridoxamine 5'-phosphate oxidase NHY67_07815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NHY67_07820 PF04452 RNA methyltransferase NHY67_07835 PF16177 Acetyl-coenzyme A synthetase N-terminus NHY67_07835 PF00501 AMP-binding enzyme NHY67_07835 PF13193 AMP-binding enzyme C-terminal domain NHY67_07840 PF00857 Isochorismatase family NHY67_07845 PF01037 Lrp/AsnC ligand binding domain NHY67_07850 PF00296 Luciferase-like monooxygenase NHY67_07855 PF03358 NADPH-dependent FMN reductase NHY67_07860 PF00196 Bacterial regulatory proteins, luxR family NHY67_07860 PF00072 Response regulator receiver domain NHY67_07870 PF00672 HAMP domain NHY67_07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_07870 PF00512 His Kinase A (phospho-acceptor) domain NHY67_07870 PF01627 Hpt domain NHY67_07870 PF00072 Response regulator receiver domain NHY67_07875 PF04341 Protein of unknown function, DUF485 NHY67_07890 PF02028 BCCT, betaine/carnitine/choline family transporter NHY67_07900 PF00990 Diguanylate cyclase, GGDEF domain NHY67_07905 PF00005 ABC transporter NHY67_07905 PF17755 UvrA DNA-binding domain NHY67_07905 PF17760 UvrA interaction domain NHY67_07910 PF00440 Bacterial regulatory proteins, tetR family NHY67_07910 PF16925 Tetracyclin repressor-like, C-terminal domain NHY67_07915 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_07915 PF00107 Zinc-binding dehydrogenase NHY67_07925 PF06942 GlpM protein NHY67_07930 PF02581 Thiamine monophosphate synthase NHY67_07930 PF03070 TENA/THI-4/PQQC family NHY67_07930 PF08543 Phosphomethylpyrimidine kinase NHY67_07945 PF00436 Single-strand binding protein family NHY67_07955 PF03591 AzlC protein NHY67_07965 PF00324 Amino acid permease NHY67_07970 PF00155 Aminotransferase class I and II NHY67_07970 PF00392 Bacterial regulatory proteins, gntR family NHY67_07975 PF00202 Aminotransferase class-III NHY67_07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_07990 PF00857 Isochorismatase family NHY67_07995 PF05726 Pirin C-terminal cupin domain NHY67_07995 PF02678 Pirin NHY67_08020 PF07690 Major Facilitator Superfamily NHY67_08025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_08025 PF03466 LysR substrate binding domain NHY67_08055 PF00248 Aldo/keto reductase family NHY67_08060 PF02311 AraC-like ligand binding domain NHY67_08060 PF12833 Helix-turn-helix domain NHY67_08075 PF01638 HxlR-like helix-turn-helix NHY67_08090 PF01638 HxlR-like helix-turn-helix NHY67_08095 PF02525 Flavodoxin-like fold NHY67_08125 PF02705 K+ potassium transporter NHY67_08150 PF00230 Major intrinsic protein NHY67_08165 PF00977 Histidine biosynthesis protein NHY67_08170 PF01636 Phosphotransferase enzyme family NHY67_08195 PF00977 Histidine biosynthesis protein NHY67_08215 PF00475 Imidazoleglycerol-phosphate dehydratase NHY67_08235 PF00583 Acetyltransferase (GNAT) family NHY67_08240 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NHY67_08240 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NHY67_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_08250 PF00672 HAMP domain NHY67_08250 PF00512 His Kinase A (phospho-acceptor) domain NHY67_08255 PF00072 Response regulator receiver domain NHY67_08255 PF00486 Transcriptional regulatory protein, C terminal NHY67_08260 PF17674 HHH domain NHY67_08260 PF09371 Tex-like protein N-terminal domain NHY67_08260 PF16921 Tex protein YqgF-like domain NHY67_08260 PF00575 S1 RNA binding domain NHY67_08265 PF01740 STAS domain NHY67_08265 PF00916 Sulfate permease family NHY67_08270 PF00106 short chain dehydrogenase NHY67_08275 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY67_08305 PF04191 Phospholipid methyltransferase NHY67_08325 PF00529 HlyD membrane-fusion protein of T1SS NHY67_08325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY67_08330 PF00873 AcrB/AcrD/AcrF family NHY67_08335 PF01545 Cation efflux family NHY67_08365 PF00324 Amino acid permease NHY67_08380 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY67_08395 PF01795 MraW methylase family NHY67_08410 PF02875 Mur ligase family, glutamate ligase domain NHY67_08410 PF08245 Mur ligase middle domain NHY67_08410 PF01225 Mur ligase family, catalytic domain NHY67_08415 PF08245 Mur ligase middle domain NHY67_08415 PF02875 Mur ligase family, glutamate ligase domain NHY67_08415 PF01225 Mur ligase family, catalytic domain NHY67_08420 PF00953 Glycosyl transferase family 4 NHY67_08440 PF11104 Type IV pilus assembly protein PilM; NHY67_08445 PF05137 Fimbrial assembly protein (PilN) NHY67_08450 PF04350 Pilus assembly protein, PilO NHY67_08470 PF01761 3-dehydroquinate synthase NHY67_08480 PF00310 Glutamine amidotransferases class-II NHY67_08480 PF01645 Conserved region in glutamate synthase NHY67_08480 PF04898 Glutamate synthase central domain NHY67_08480 PF01493 GXGXG motif NHY67_08495 PF13737 Transposase DDE domain NHY67_08505 PF04011 LemA family NHY67_08510 PF04536 TPM domain NHY67_08530 PF15864 Protein glycosylation ligase NHY67_08530 PF11846 Virulence factor membrane-bound polymerase, C-terminal NHY67_08530 PF04932 O-Antigen ligase NHY67_08535 PF00210 Ferritin-like domain NHY67_08540 PF04324 BFD-like [2Fe-2S] binding domain NHY67_08545 PF01042 Endoribonuclease L-PSP NHY67_08560 PF01192 RNA polymerase Rpb6 NHY67_08565 PF00625 Guanylate kinase NHY67_08570 PF02401 LytB protein NHY67_08615 PF01782 RimM N-terminal domain NHY67_08615 PF05239 PRC-barrel domain NHY67_08620 PF01746 tRNA (Guanine-1)-methyltransferase NHY67_08625 PF01245 Ribosomal protein L19 NHY67_08630 PF00561 alpha/beta hydrolase fold NHY67_08635 PF03280 Proteobacterial lipase chaperone protein NHY67_08645 PF01925 Sulfite exporter TauE/SafE NHY67_08655 PF00892 EamA-like transporter family NHY67_08660 PF00892 EamA-like transporter family NHY67_08665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY67_08665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY67_08670 PF02913 FAD linked oxidases, C-terminal domain NHY67_08670 PF01565 FAD binding domain NHY67_08680 PF03992 Antibiotic biosynthesis monooxygenase NHY67_08685 PF02525 Flavodoxin-like fold NHY67_08695 PF07690 Major Facilitator Superfamily NHY67_08705 PF00080 Copper/zinc superoxide dismutase (SODC) NHY67_08710 PF01594 AI-2E family transporter NHY67_08745 PF00324 Amino acid permease NHY67_08750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY67_08750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY67_08755 PF00202 Aminotransferase class-III NHY67_08760 PF04958 Arginine N-succinyltransferase beta subunit NHY67_08765 PF00171 Aldehyde dehydrogenase family NHY67_08770 PF04996 Succinylarginine dihydrolase NHY67_08790 PF00082 Subtilase family NHY67_08790 PF05922 Peptidase inhibitor I9 NHY67_08810 PF00892 EamA-like transporter family NHY67_08825 PF02091 Glycyl-tRNA synthetase alpha subunit NHY67_08850 PF00571 CBS domain NHY67_08855 PF04024 PspC domain NHY67_08865 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY67_08865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_08865 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_08865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_08875 PF01488 Shikimate / quinate 5-dehydrogenase NHY67_08875 PF08501 Shikimate dehydrogenase substrate binding domain NHY67_08875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NHY67_08880 PF01218 Coproporphyrinogen III oxidase NHY67_08885 PF00925 GTP cyclohydrolase II NHY67_08890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NHY67_08890 PF02779 Transketolase, pyrimidine binding domain NHY67_08890 PF02780 Transketolase, C-terminal domain NHY67_08895 PF00459 Inositol monophosphatase family NHY67_08910 PF00005 ABC transporter NHY67_08915 PF02405 Permease MlaE NHY67_08925 PF05494 MlaC protein NHY67_08935 PF01544 CorA-like Mg2+ transporter protein NHY67_08940 PF03641 Possible lysine decarboxylase NHY67_08945 PF00293 NUDIX domain NHY67_08950 PF00156 Phosphoribosyl transferase domain NHY67_08955 PF00270 DEAD/DEAH box helicase NHY67_08955 PF17191 RecG wedge domain NHY67_08955 PF00271 Helicase conserved C-terminal domain NHY67_08970 PF01553 Acyltransferase NHY67_08980 PF00375 Sodium:dicarboxylate symporter family NHY67_08990 PF01926 50S ribosome-binding GTPase NHY67_08995 PF02082 Transcriptional regulator NHY67_09000 PF00970 Oxidoreductase FAD-binding domain NHY67_09000 PF00042 Globin NHY67_09000 PF00175 Oxidoreductase NAD-binding domain NHY67_09005 PF05872 Bacterial protein of unknown function (DUF853) NHY67_09010 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY67_09015 PF00117 Glutamine amidotransferase class-I NHY67_09020 PF00338 Ribosomal protein S10p/S20e NHY67_09025 PF00297 Ribosomal protein L3 NHY67_09030 PF00573 Ribosomal protein L4/L1 family NHY67_09035 PF00276 Ribosomal protein L23 NHY67_09040 PF00181 Ribosomal Proteins L2, RNA binding domain NHY67_09040 PF03947 Ribosomal Proteins L2, C-terminal domain NHY67_09045 PF00203 Ribosomal protein S19 NHY67_09050 PF00237 Ribosomal protein L22p/L17e NHY67_09060 PF00252 Ribosomal protein L16p/L10e NHY67_09065 PF00831 Ribosomal L29 protein NHY67_09070 PF00366 Ribosomal protein S17 NHY67_09075 PF00238 Ribosomal protein L14p/L23e NHY67_09080 PF00467 KOW motif NHY67_09080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NHY67_09085 PF00281 Ribosomal protein L5 NHY67_09085 PF00673 ribosomal L5P family C-terminus NHY67_09090 PF00253 Ribosomal protein S14p/S29e NHY67_09095 PF00410 Ribosomal protein S8 NHY67_09105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NHY67_09110 PF00333 Ribosomal protein S5, N-terminal domain NHY67_09110 PF03719 Ribosomal protein S5, C-terminal domain NHY67_09115 PF00327 Ribosomal protein L30p/L7e NHY67_09120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NHY67_09125 PF00344 SecY translocase NHY67_09130 PF00444 Ribosomal protein L36 NHY67_09135 PF00416 Ribosomal protein S13/S18 NHY67_09140 PF00411 Ribosomal protein S11 NHY67_09155 PF01196 Ribosomal protein L17 NHY67_09160 PF00743 Flavin-binding monooxygenase-like NHY67_09165 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_09165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_09165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_09170 PF03937 Flavinator of succinate dehydrogenase NHY67_09200 PF09526 Probable metal-binding protein (DUF2387) NHY67_09205 PF01432 Peptidase family M3 NHY67_09255 PF01557 Fumarylacetoacetate (FAA) hydrolase family NHY67_09260 PF12833 Helix-turn-helix domain NHY67_09270 PF03631 Virulence factor BrkB NHY67_09300 PF02130 Uncharacterized protein family UPF0054 NHY67_09305 PF02562 PhoH-like protein NHY67_09310 PF04055 Radical SAM superfamily NHY67_09310 PF01938 TRAM domain NHY67_09310 PF00919 Uncharacterized protein family UPF0004 NHY67_09315 PF01464 Transglycosylase SLT domain NHY67_09315 PF10145 Phage-related minor tail protein NHY67_09315 PF01551 Peptidase family M23 NHY67_09325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NHY67_09325 PF00056 lactate/malate dehydrogenase, NAD binding domain NHY67_09350 PF01066 CDP-alcohol phosphatidyltransferase NHY67_09410 PF17932 Tetracyclin repressor-like, C-terminal domain NHY67_09410 PF00440 Bacterial regulatory proteins, tetR family NHY67_09425 PF01039 Carboxyl transferase domain NHY67_09430 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_09430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_09430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_09445 PF02436 Conserved carboxylase domain NHY67_09445 PF00364 Biotin-requiring enzyme NHY67_09445 PF00682 HMGL-like NHY67_09455 PF04386 Stringent starvation protein B NHY67_09460 PF00043 Glutathione S-transferase, C-terminal domain NHY67_09460 PF13417 Glutathione S-transferase, N-terminal domain NHY67_09465 PF00380 Ribosomal protein S9/S16 NHY67_09470 PF00572 Ribosomal protein L13 NHY67_09475 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NHY67_09480 PF00398 Ribosomal RNA adenine dimethylase NHY67_09485 PF00149 Calcineurin-like phosphoesterase NHY67_09505 PF01926 50S ribosome-binding GTPase NHY67_09505 PF13167 GTP-binding GTPase N-terminal NHY67_09505 PF16360 GTP-binding GTPase Middle Region NHY67_09515 PF13091 PLD-like domain NHY67_09520 PF10518 TAT (twin-arginine translocation) pathway signal sequence NHY67_09520 PF00149 Calcineurin-like phosphoesterase NHY67_09525 PF01389 OmpA-like transmembrane domain NHY67_09525 PF00691 OmpA family NHY67_09530 PF00990 Diguanylate cyclase, GGDEF domain NHY67_09530 PF17152 Periplasmic sensor domain NHY67_09565 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_09565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY67_09575 PF04273 Putative phosphatase (DUF442) NHY67_09575 PF00753 Metallo-beta-lactamase superfamily NHY67_09585 PF00085 Thioredoxin NHY67_09590 PF03061 Thioesterase superfamily NHY67_09620 PF03795 YCII-related domain NHY67_09635 PF01062 Bestrophin, RFP-TM, chloride channel NHY67_09640 PF04002 RadC-like JAB domain NHY67_09650 PF07549 SecD/SecF GG Motif NHY67_09650 PF02355 Protein export membrane protein NHY67_09655 PF02355 Protein export membrane protein NHY67_09655 PF13721 SecD export protein N-terminal TM region NHY67_09655 PF07549 SecD/SecF GG Motif NHY67_09660 PF02699 Preprotein translocase subunit NHY67_09680 PF02547 Queuosine biosynthesis protein NHY67_09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_09690 PF00512 His Kinase A (phospho-acceptor) domain NHY67_09690 PF07689 KaiB domain NHY67_09700 PF01063 Amino-transferase class IV NHY67_09715 PF01522 Polysaccharide deacetylase NHY67_09720 PF00535 Glycosyl transferase family 2 NHY67_09725 PF13439 Glycosyltransferase Family 4 NHY67_09725 PF00534 Glycosyl transferases group 1 NHY67_09750 PF17101 Stealth protein CR1, conserved region 1 NHY67_09750 PF11380 Stealth protein CR2, conserved region 2 NHY67_09750 PF17102 Stealth protein CR3, conserved region 3 NHY67_09755 PF01336 OB-fold nucleic acid binding domain NHY67_09755 PF00152 tRNA synthetases class II (D, K and N) NHY67_09755 PF02938 GAD domain NHY67_09765 PF00593 TonB dependent receptor NHY67_09765 PF07715 TonB-dependent Receptor Plug Domain NHY67_09785 PF06146 Phosphate-starvation-inducible E NHY67_09790 PF00043 Glutathione S-transferase, C-terminal domain NHY67_09790 PF02798 Glutathione S-transferase, N-terminal domain NHY67_09795 PF03466 LysR substrate binding domain NHY67_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_09800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_09800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_09800 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_09800 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY67_09820 PF00072 Response regulator receiver domain NHY67_09820 PF00486 Transcriptional regulatory protein, C terminal NHY67_09845 PF01923 Cobalamin adenosyltransferase NHY67_09855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NHY67_09860 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_09885 PF00290 Tryptophan synthase alpha chain NHY67_09890 PF01039 Carboxyl transferase domain NHY67_09915 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY67_09915 PF00578 AhpC/TSA family NHY67_09920 PF01043 SecA preprotein cross-linking domain NHY67_09920 PF07517 SecA DEAD-like domain NHY67_09920 PF07516 SecA Wing and Scaffold domain NHY67_09920 PF02810 SEC-C motif NHY67_09930 PF07690 Major Facilitator Superfamily NHY67_09930 PF00083 Sugar (and other) transporter NHY67_09970 PF02311 AraC-like ligand binding domain NHY67_09970 PF12833 Helix-turn-helix domain NHY67_09975 PF02515 CoA-transferase family III NHY67_09985 PF01011 PQQ enzyme repeat NHY67_09990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY67_09990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY67_10000 PF00893 Small Multidrug Resistance protein NHY67_10010 PF00108 Thiolase, N-terminal domain NHY67_10010 PF02803 Thiolase, C-terminal domain NHY67_10020 PF13505 Outer membrane protein beta-barrel domain NHY67_10020 PF00691 OmpA family NHY67_10030 PF01139 tRNA-splicing ligase RtcB NHY67_10035 PF00324 Amino acid permease NHY67_10040 PF05175 Methyltransferase small domain NHY67_10040 PF08468 Methyltransferase small domain N-terminal NHY67_10045 PF00860 Permease family NHY67_10050 PF03144 Elongation factor Tu domain 2 NHY67_10050 PF00679 Elongation factor G C-terminus NHY67_10050 PF00009 Elongation factor Tu GTP binding domain NHY67_10055 PF01741 Large-conductance mechanosensitive channel, MscL NHY67_10070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NHY67_10070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NHY67_10070 PF06827 Zinc finger found in FPG and IleRS NHY67_10075 PF02245 Methylpurine-DNA glycosylase (MPG) NHY67_10115 PF01571 Aminomethyltransferase folate-binding domain NHY67_10135 PF03831 PhnA domain NHY67_10135 PF08274 PhnA Zinc-Ribbon NHY67_10140 PF07411 Domain of unknown function (DUF1508) NHY67_10145 PF03129 Anticodon binding domain NHY67_10145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY67_10145 PF04073 Aminoacyl-tRNA editing domain NHY67_10165 PF00072 Response regulator receiver domain NHY67_10170 PF00072 Response regulator receiver domain NHY67_10175 PF01584 CheW-like domain NHY67_10180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NHY67_10180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NHY67_10185 PF01584 CheW-like domain NHY67_10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_10185 PF01627 Hpt domain NHY67_10185 PF00072 Response regulator receiver domain NHY67_10195 PF07687 Peptidase dimerisation domain NHY67_10195 PF01546 Peptidase family M20/M25/M40 NHY67_10200 PF08085 Entericidin EcnA/B family NHY67_10210 PF04304 Protein of unknown function (DUF454) NHY67_10215 PF03734 L,D-transpeptidase catalytic domain NHY67_10215 PF17969 L,D-transpeptidase C-terminal domain NHY67_10270 PF07690 Major Facilitator Superfamily NHY67_10275 PF00881 Nitroreductase family NHY67_10290 PF01235 Sodium:alanine symporter family NHY67_10295 PF01734 Patatin-like phospholipase NHY67_10305 PF05992 SbmA/BacA-like family NHY67_10345 PF02934 GatB/GatE catalytic domain NHY67_10345 PF02637 GatB domain NHY67_10350 PF01425 Amidase NHY67_10355 PF02686 Glu-tRNAGln amidotransferase C subunit NHY67_10365 PF04085 rod shape-determining protein MreC NHY67_10370 PF04093 rod shape-determining protein MreD NHY67_10375 PF02545 Maf-like protein NHY67_10380 PF00575 S1 RNA binding domain NHY67_10380 PF10150 Ribonuclease E/G family NHY67_10390 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NHY67_10390 PF06974 Protein of unknown function (DUF1298) NHY67_10395 PF01507 Phosphoadenosine phosphosulfate reductase family NHY67_10410 PF02525 Flavodoxin-like fold NHY67_10430 PF02673 Bacitracin resistance protein BacA NHY67_10435 PF06719 AraC-type transcriptional regulator N-terminus NHY67_10435 PF12833 Helix-turn-helix domain NHY67_10445 PF01965 DJ-1/PfpI family NHY67_10460 PF04303 PrpF protein NHY67_10465 PF00348 Polyprenyl synthetase NHY67_10470 PF04237 YjbR NHY67_10510 PF00486 Transcriptional regulatory protein, C terminal NHY67_10510 PF00072 Response regulator receiver domain NHY67_10515 PF00512 His Kinase A (phospho-acceptor) domain NHY67_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_10515 PF08521 Two-component sensor kinase N-terminal NHY67_10525 PF00909 Ammonium Transporter Family NHY67_10555 PF10458 Valyl tRNA synthetase tRNA binding arm NHY67_10555 PF08264 Anticodon-binding domain of tRNA NHY67_10555 PF00133 tRNA synthetases class I (I, L, M and V) NHY67_10575 PF01906 Putative heavy-metal-binding NHY67_10580 PF01906 Putative heavy-metal-binding NHY67_10585 PF02321 Outer membrane efflux protein NHY67_10590 PF00873 AcrB/AcrD/AcrF family NHY67_10595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY67_10595 PF00529 HlyD membrane-fusion protein of T1SS NHY67_10600 PF01569 PAP2 superfamily NHY67_10610 PF00348 Polyprenyl synthetase NHY67_10620 PF00829 Ribosomal prokaryotic L21 protein NHY67_10625 PF01016 Ribosomal L27 protein NHY67_10630 PF03548 Outer membrane lipoprotein carrier protein LolA NHY67_10640 PF02403 Seryl-tRNA synthetase N-terminal domain NHY67_10640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY67_10645 PF14824 Sirohaem biosynthesis protein central NHY67_10645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY67_10645 PF10414 Sirohaem synthase dimerisation region NHY67_10650 PF00588 SpoU rRNA Methylase family NHY67_10655 PF01638 HxlR-like helix-turn-helix NHY67_10660 PF03358 NADPH-dependent FMN reductase NHY67_10665 PF13520 Amino acid permease NHY67_10680 PF03099 Biotin/lipoate A/B protein ligase family NHY67_10685 PF04359 Protein of unknown function (DUF493) NHY67_10690 PF04546 Sigma-70, non-essential region NHY67_10690 PF03979 Sigma-70 factor, region 1.1 NHY67_10690 PF00140 Sigma-70 factor, region 1.2 NHY67_10690 PF04542 Sigma-70 region 2 NHY67_10690 PF04539 Sigma-70 region 3 NHY67_10690 PF04545 Sigma-70, region 4 NHY67_10710 PF17773 UPF0176 acylphosphatase like domain NHY67_10710 PF00581 Rhodanese-like domain NHY67_10720 PF00285 Citrate synthase, C-terminal domain NHY67_10725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY67_10730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY67_10735 PF00890 FAD binding domain NHY67_10735 PF02910 Fumarate reductase flavoprotein C-term NHY67_10740 PF13085 2Fe-2S iron-sulfur cluster binding domain NHY67_10760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY67_10760 PF00364 Biotin-requiring enzyme NHY67_10760 PF02817 e3 binding domain NHY67_10765 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_10765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY67_10775 PF00549 CoA-ligase NHY67_10775 PF02629 CoA binding domain NHY67_10780 PF00579 tRNA synthetases class I (W and Y) NHY67_10785 PF05661 Protein of unknown function (DUF808) NHY67_10790 PF04228 Putative neutral zinc metallopeptidase NHY67_10810 PF09587 Bacterial capsule synthesis protein PGA_cap NHY67_10820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY67_10825 PF00582 Universal stress protein family NHY67_10830 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_10835 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY67_10835 PF03449 Transcription elongation factor, N-terminal NHY67_10840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY67_10840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NHY67_10840 PF02142 MGS-like domain NHY67_10860 PF01985 CRS1 / YhbY (CRM) domain NHY67_10865 PF01728 FtsJ-like methyltransferase NHY67_10875 PF00809 Pterin binding enzyme NHY67_10895 PF09423 PhoD-like phosphatase NHY67_10895 PF16655 PhoD-like phosphatase, N-terminal domain NHY67_10910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NHY67_10910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NHY67_10925 PF00083 Sugar (and other) transporter NHY67_10930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NHY67_10930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NHY67_10940 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NHY67_10940 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NHY67_10945 PF00781 Diacylglycerol kinase catalytic domain NHY67_10950 PF00149 Calcineurin-like phosphoesterase NHY67_10960 PF00166 Chaperonin 10 Kd subunit NHY67_10965 PF00118 TCP-1/cpn60 chaperonin family NHY67_10970 PF01219 Prokaryotic diacylglycerol kinase NHY67_10980 PF03009 Glycerophosphoryl diester phosphodiesterase family NHY67_10995 PF01435 Peptidase family M48 NHY67_11000 PF01464 Transglycosylase SLT domain NHY67_11005 PF01171 PP-loop family NHY67_11015 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY67_11015 PF01464 Transglycosylase SLT domain NHY67_11020 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY67_11020 PF03449 Transcription elongation factor, N-terminal NHY67_11065 PF00881 Nitroreductase family NHY67_11080 PF02595 Glycerate kinase family NHY67_11085 PF00384 Molybdopterin oxidoreductase NHY67_11090 PF02634 FdhD/NarQ family NHY67_11095 PF06803 Protein of unknown function (DUF1232) NHY67_11105 PF00152 tRNA synthetases class II (D, K and N) NHY67_11115 PF18073 Rubredoxin metal binding domain NHY67_11120 PF00324 Amino acid permease NHY67_11130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NHY67_11130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NHY67_11135 PF01678 Diaminopimelate epimerase NHY67_11140 PF01810 LysE type translocator NHY67_11145 PF02899 Phage integrase, N-terminal SAM-like domain NHY67_11145 PF00589 Phage integrase family NHY67_11150 PF01012 Electron transfer flavoprotein domain NHY67_11155 PF01012 Electron transfer flavoprotein domain NHY67_11155 PF00766 Electron transfer flavoprotein FAD-binding domain NHY67_11175 PF00535 Glycosyl transferase family 2 NHY67_11195 PF13533 Biotin-lipoyl like NHY67_11205 PF00266 Aminotransferase class-V NHY67_11235 PF00005 ABC transporter NHY67_11240 PF00753 Metallo-beta-lactamase superfamily NHY67_11240 PF03772 Competence protein NHY67_11240 PF13567 Domain of unknown function (DUF4131) NHY67_11255 PF12697 Alpha/beta hydrolase family NHY67_11260 PF00551 Formyl transferase NHY67_11265 PF00586 AIR synthase related protein, N-terminal domain NHY67_11265 PF02769 AIR synthase related protein, C-terminal domain NHY67_11270 PF01594 AI-2E family transporter NHY67_11275 PF00308 Bacterial dnaA protein NHY67_11275 PF08299 Bacterial dnaA protein helix-turn-helix NHY67_11275 PF11638 DnaA N-terminal domain NHY67_11305 PF00588 SpoU rRNA Methylase family NHY67_11305 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY67_11320 PF00691 OmpA family NHY67_11325 PF07676 WD40-like Beta Propeller Repeat NHY67_11325 PF04052 TolB amino-terminal domain NHY67_11340 PF02472 Biopolymer transport protein ExbD/TolR NHY67_11345 PF01618 MotA/TolQ/ExbB proton channel family NHY67_11350 PF03061 Thioesterase superfamily NHY67_11355 PF07687 Peptidase dimerisation domain NHY67_11355 PF01546 Peptidase family M20/M25/M40 NHY67_11360 PF17864 RuvB AAA lid domain NHY67_11360 PF05491 RuvB C-terminal winged helix domain NHY67_11360 PF05496 Holliday junction DNA helicase RuvB P-loop domain NHY67_11370 PF01966 HD domain NHY67_11380 PF07690 Major Facilitator Superfamily NHY67_11390 PF01784 NIF3 (NGG1p interacting factor 3) NHY67_11395 PF00378 Enoyl-CoA hydratase/isomerase NHY67_11400 PF01467 Cytidylyltransferase-like NHY67_11400 PF00293 NUDIX domain NHY67_11410 PF00578 AhpC/TSA family NHY67_11425 PF06508 Queuosine biosynthesis protein QueC NHY67_11435 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_11435 PF14602 Hexapeptide repeat of succinyl-transferase NHY67_11435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NHY67_11450 PF12857 TOBE-like domain NHY67_11450 PF00005 ABC transporter NHY67_11455 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_11460 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_11480 PF02618 YceG-like family NHY67_11500 PF13180 PDZ domain NHY67_11510 PF00679 Elongation factor G C-terminus NHY67_11510 PF00009 Elongation factor Tu GTP binding domain NHY67_11510 PF03144 Elongation factor Tu domain 2 NHY67_11510 PF06421 GTP-binding protein LepA C-terminus NHY67_11515 PF10502 Signal peptidase, peptidase S26 NHY67_11540 PF02565 Recombination protein O C terminal NHY67_11540 PF11967 Recombination protein O N terminal NHY67_11545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NHY67_11550 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NHY67_11585 PF00155 Aminotransferase class I and II NHY67_11605 PF00271 Helicase conserved C-terminal domain NHY67_11605 PF04851 Type III restriction enzyme, res subunit NHY67_11605 PF12344 Ultra-violet resistance protein B NHY67_11605 PF02151 UvrB/uvrC motif NHY67_11605 PF17757 UvrB interaction domain NHY67_11615 PF00892 EamA-like transporter family NHY67_11620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY67_11620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY67_11650 PF07759 Protein of unknown function (DUF1615) NHY67_11660 PF03060 Nitronate monooxygenase NHY67_11675 PF02350 UDP-N-acetylglucosamine 2-epimerase NHY67_11705 PF00875 DNA photolyase NHY67_11705 PF03441 FAD binding domain of DNA photolyase NHY67_11710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY67_11720 PF00768 D-alanyl-D-alanine carboxypeptidase NHY67_11720 PF07943 Penicillin-binding protein 5, C-terminal domain NHY67_11730 PF03971 Monomeric isocitrate dehydrogenase NHY67_11735 PF00849 RNA pseudouridylate synthase NHY67_11740 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY67_11760 PF06779 Uncharacterised MFS-type transporter YbfB NHY67_11765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_11765 PF03466 LysR substrate binding domain NHY67_11770 PF00375 Sodium:dicarboxylate symporter family NHY67_11815 PF02581 Thiamine monophosphate synthase NHY67_11820 PF00202 Aminotransferase class-III NHY67_11830 PF00849 RNA pseudouridylate synthase NHY67_11835 PF00271 Helicase conserved C-terminal domain NHY67_11835 PF12137 RNA polymerase recycling family C-terminal NHY67_11835 PF00176 SNF2 family N-terminal domain NHY67_11835 PF18339 RapA N-terminal Tudor like domain 1 NHY67_11835 PF18337 RapA N-terminal Tudor like domain NHY67_11850 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_11850 PF00175 Oxidoreductase NAD-binding domain NHY67_11850 PF00970 Oxidoreductase FAD-binding domain NHY67_11855 PF00487 Fatty acid desaturase NHY67_11865 PF17754 MftR C-terminal domain NHY67_11865 PF00440 Bacterial regulatory proteins, tetR family NHY67_11875 PF00202 Aminotransferase class-III NHY67_11880 PF00282 Pyridoxal-dependent decarboxylase conserved domain NHY67_11885 PF00171 Aldehyde dehydrogenase family NHY67_11890 PF01037 Lrp/AsnC ligand binding domain NHY67_11895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY67_11895 PF00205 Thiamine pyrophosphate enzyme, central domain NHY67_11895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY67_11900 PF00324 Amino acid permease NHY67_11910 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_11915 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_11920 PF00005 ABC transporter NHY67_11925 PF01343 Peptidase family S49 NHY67_11925 PF08496 Peptidase family S49 N-terminal NHY67_11935 PF00872 Transposase, Mutator family NHY67_11945 PF00206 Lyase NHY67_11945 PF08328 Adenylosuccinate lyase C-terminal NHY67_11950 PF04356 Protein of unknown function (DUF489) NHY67_11960 PF13344 Haloacid dehalogenase-like hydrolase NHY67_11960 PF00293 NUDIX domain NHY67_11965 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_11970 PF07943 Penicillin-binding protein 5, C-terminal domain NHY67_11970 PF00768 D-alanyl-D-alanine carboxypeptidase NHY67_11985 PF01975 Survival protein SurE NHY67_11995 PF03466 LysR substrate binding domain NHY67_11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_12000 PF13654 AAA domain NHY67_12000 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY67_12005 PF07690 Major Facilitator Superfamily NHY67_12010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY67_12015 PF13593 SBF-like CPA transporter family (DUF4137) NHY67_12020 PF01197 Ribosomal protein L31 NHY67_12035 PF04055 Radical SAM superfamily NHY67_12045 PF02554 Carbon starvation protein CstA NHY67_12045 PF13722 5TM C-terminal transporter carbon starvation CstA NHY67_12050 PF04328 Selenoprotein, putative NHY67_12085 PF06018 CodY GAF-like domain NHY67_12085 PF17853 GGDEF-like domain NHY67_12085 PF13556 PucR C-terminal helix-turn-helix domain NHY67_12100 PF00171 Aldehyde dehydrogenase family NHY67_12105 PF00324 Amino acid permease NHY67_12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_12110 PF03466 LysR substrate binding domain NHY67_12120 PF02028 BCCT, betaine/carnitine/choline family transporter NHY67_12125 PF00355 Rieske [2Fe-2S] domain NHY67_12125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY67_12130 PF00171 Aldehyde dehydrogenase family NHY67_12140 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_12140 PF18113 Rubredoxin binding C-terminal domain NHY67_12145 PF01266 FAD dependent oxidoreductase NHY67_12145 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NHY67_12165 PF00892 EamA-like transporter family NHY67_12175 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NHY67_12180 PF00083 Sugar (and other) transporter NHY67_12185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY67_12185 PF13378 Enolase C-terminal domain-like NHY67_12190 PF08990 Erythronolide synthase docking NHY67_12190 PF09277 Erythronolide synthase, docking NHY67_12190 PF16197 Ketoacyl-synthetase C-terminal extension NHY67_12190 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY67_12190 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY67_12190 PF08659 KR domain NHY67_12190 PF00550 Phosphopantetheine attachment site NHY67_12190 PF14765 Polyketide synthase dehydratase NHY67_12190 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_12190 PF00698 Acyl transferase domain NHY67_12195 PF00440 Bacterial regulatory proteins, tetR family NHY67_12220 PF02678 Pirin NHY67_12220 PF17954 Quercetinase C-terminal cupin domain NHY67_12230 PF13309 HTH domain NHY67_12230 PF08348 YheO-like PAS domain NHY67_12240 PF00668 Condensation domain NHY67_12240 PF00501 AMP-binding enzyme NHY67_12240 PF13193 AMP-binding enzyme C-terminal domain NHY67_12240 PF00550 Phosphopantetheine attachment site NHY67_12245 PF00975 Thioesterase domain NHY67_12245 PF00550 Phosphopantetheine attachment site NHY67_12245 PF00668 Condensation domain NHY67_12245 PF00501 AMP-binding enzyme NHY67_12245 PF13193 AMP-binding enzyme C-terminal domain NHY67_12250 PF01032 FecCD transport family NHY67_12255 PF01032 FecCD transport family NHY67_12260 PF00005 ABC transporter NHY67_12265 PF01497 Periplasmic binding protein NHY67_12270 PF00593 TonB dependent receptor NHY67_12270 PF07715 TonB-dependent Receptor Plug Domain NHY67_12275 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY67_12285 PF13193 AMP-binding enzyme C-terminal domain NHY67_12285 PF00501 AMP-binding enzyme NHY67_12290 PF00550 Phosphopantetheine attachment site NHY67_12290 PF00857 Isochorismatase family NHY67_12325 PF00425 chorismate binding enzyme NHY67_12335 PF01208 Uroporphyrinogen decarboxylase (URO-D) NHY67_12340 PF05675 Protein of unknown function (DUF817) NHY67_12355 PF00144 Beta-lactamase NHY67_12365 PF01227 GTP cyclohydrolase I NHY67_12370 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_12370 PF01799 [2Fe-2S] binding domain NHY67_12375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NHY67_12375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NHY67_12390 PF00218 Indole-3-glycerol phosphate synthase NHY67_12395 PF02885 Glycosyl transferase family, helical bundle domain NHY67_12395 PF00591 Glycosyl transferase family, a/b domain NHY67_12410 PF00117 Glutamine amidotransferase class-I NHY67_12420 PF00854 POT family NHY67_12425 PF00120 Glutamine synthetase, catalytic domain NHY67_12425 PF03951 Glutamine synthetase, beta-Grasp domain NHY67_12435 PF01040 UbiA prenyltransferase family NHY67_12470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NHY67_12470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NHY67_12475 PF01784 NIF3 (NGG1p interacting factor 3) NHY67_12480 PF13180 PDZ domain NHY67_12485 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY67_12485 PF01743 Poly A polymerase head domain NHY67_12490 PF01515 Phosphate acetyl/butaryl transferase NHY67_12490 PF00390 Malic enzyme, N-terminal domain NHY67_12490 PF03949 Malic enzyme, NAD binding domain NHY67_12495 PF00563 EAL domain NHY67_12495 PF00990 Diguanylate cyclase, GGDEF domain NHY67_12495 PF03707 Bacterial signalling protein N terminal repeat NHY67_12530 PF04055 Radical SAM superfamily NHY67_12535 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_12535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY67_12545 PF07690 Major Facilitator Superfamily NHY67_12555 PF00557 Metallopeptidase family M24 NHY67_12565 PF00889 Elongation factor TS NHY67_12575 PF12833 Helix-turn-helix domain NHY67_12595 PF05036 Sporulation related domain NHY67_12595 PF03330 Lytic transglycolase NHY67_12600 PF13406 Transglycosylase SLT domain NHY67_12605 PF01098 Cell cycle protein NHY67_12620 PF01061 ABC-2 type transporter NHY67_12625 PF00005 ABC transporter NHY67_12665 PF00873 AcrB/AcrD/AcrF family NHY67_12675 PF03466 LysR substrate binding domain NHY67_12675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_12680 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY67_12685 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_12690 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_12695 PF00005 ABC transporter NHY67_12700 PF00893 Small Multidrug Resistance protein NHY67_12705 PF00037 4Fe-4S binding domain NHY67_12710 PF16325 Peptidase family U32 C-terminal domain NHY67_12710 PF01136 Peptidase family U32 NHY67_12715 PF00155 Aminotransferase class I and II NHY67_12715 PF00392 Bacterial regulatory proteins, gntR family NHY67_12720 PF02567 Phenazine biosynthesis-like protein NHY67_12725 PF00970 Oxidoreductase FAD-binding domain NHY67_12725 PF00175 Oxidoreductase NAD-binding domain NHY67_12740 PF00437 Type II/IV secretion system protein NHY67_12740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NHY67_12750 PF00486 Transcriptional regulatory protein, C terminal NHY67_12750 PF00072 Response regulator receiver domain NHY67_12755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_12755 PF08521 Two-component sensor kinase N-terminal NHY67_12755 PF00512 His Kinase A (phospho-acceptor) domain NHY67_12765 PF00293 NUDIX domain NHY67_12780 PF01513 ATP-NAD kinase NHY67_12785 PF07023 Protein of unknown function (DUF1315) NHY67_12790 PF00591 Glycosyl transferase family, a/b domain NHY67_12790 PF02885 Glycosyl transferase family, helical bundle domain NHY67_12795 PF00375 Sodium:dicarboxylate symporter family NHY67_12800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_12800 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_12800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_12805 PF00756 Putative esterase NHY67_12810 PF01842 ACT domain NHY67_12810 PF01817 Chorismate mutase type II NHY67_12810 PF00800 Prephenate dehydratase NHY67_12825 PF07687 Peptidase dimerisation domain NHY67_12825 PF01546 Peptidase family M20/M25/M40 NHY67_12830 PF12706 Beta-lactamase superfamily domain NHY67_12840 PF03883 Peroxide stress protein YaaA NHY67_12860 PF04241 Protein of unknown function (DUF423) NHY67_12865 PF00140 Sigma-70 factor, region 1.2 NHY67_12865 PF04542 Sigma-70 region 2 NHY67_12865 PF04545 Sigma-70, region 4 NHY67_12880 PF00313 'Cold-shock' DNA-binding domain NHY67_12885 PF00271 Helicase conserved C-terminal domain NHY67_12885 PF00270 DEAD/DEAH box helicase NHY67_12895 PF00881 Nitroreductase family NHY67_12900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NHY67_12900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NHY67_12920 PF01180 Dihydroorotate dehydrogenase NHY67_12925 PF02674 Colicin V production protein NHY67_12930 PF00156 Phosphoribosyl transferase domain NHY67_12950 PF01435 Peptidase family M48 NHY67_12955 PF09424 Yqey-like protein NHY67_12960 PF01165 Ribosomal protein S21 NHY67_12965 PF00814 Glycoprotease family NHY67_12985 PF00069 Protein kinase domain NHY67_13015 PF00202 Aminotransferase class-III NHY67_13020 PF00171 Aldehyde dehydrogenase family NHY67_13025 PF00324 Amino acid permease NHY67_13055 PF04076 Bacterial OB fold (BOF) protein NHY67_13085 PF03616 Sodium/glutamate symporter NHY67_13095 PF07729 FCD domain NHY67_13095 PF00392 Bacterial regulatory proteins, gntR family NHY67_13170 PF06826 Predicted Permease Membrane Region NHY67_13170 PF02080 TrkA-C domain NHY67_13180 PF04403 Paraquat-inducible protein A NHY67_13215 PF00005 ABC transporter NHY67_13215 PF12848 ABC transporter NHY67_13220 PF01636 Phosphotransferase enzyme family NHY67_13255 PF13610 DDE domain NHY67_13270 PF00375 Sodium:dicarboxylate symporter family NHY67_13285 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_13300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NHY67_13300 PF02843 Phosphoribosylglycinamide synthetase, C domain NHY67_13300 PF02844 Phosphoribosylglycinamide synthetase, N domain NHY67_13305 PF01808 AICARFT/IMPCHase bienzyme NHY67_13305 PF02142 MGS-like domain NHY67_13310 PF02954 Bacterial regulatory protein, Fis family NHY67_13330 PF01134 Glucose inhibited division protein A NHY67_13330 PF13932 GidA associated domain NHY67_13340 PF14403 Circularly permuted ATP-grasp type 2 NHY67_13350 PF01841 Transglutaminase-like superfamily NHY67_13350 PF08379 Bacterial transglutaminase-like N-terminal region NHY67_13360 PF01168 Alanine racemase, N-terminal domain NHY67_13360 PF00842 Alanine racemase, C-terminal domain NHY67_13370 PF01281 Ribosomal protein L9, N-terminal domain NHY67_13370 PF03948 Ribosomal protein L9, C-terminal domain NHY67_13375 PF01084 Ribosomal protein S18 NHY67_13380 PF01250 Ribosomal protein S6 NHY67_13385 PF01040 UbiA prenyltransferase family NHY67_13390 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NHY67_13395 PF00510 Cytochrome c oxidase subunit III NHY67_13400 PF00115 Cytochrome C and Quinol oxidase polypeptide I NHY67_13405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NHY67_13405 PF06481 COX Aromatic Rich Motif NHY67_13415 PF00391 PEP-utilising enzyme, mobile domain NHY67_13415 PF02896 PEP-utilising enzyme, TIM barrel domain NHY67_13415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NHY67_13420 PF03618 Kinase/pyrophosphorylase NHY67_13430 PF14883 Hypothetical glycosyl hydrolase family 13 NHY67_13430 PF01522 Polysaccharide deacetylase NHY67_13435 PF00535 Glycosyl transferase family 2 NHY67_13440 PF13994 PgaD-like protein NHY67_13450 PF00296 Luciferase-like monooxygenase NHY67_13465 PF03466 LysR substrate binding domain NHY67_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_13475 PF03462 PCRF domain NHY67_13475 PF00472 RF-1 domain NHY67_13480 PF13847 Methyltransferase domain NHY67_13480 PF17827 PrmC N-terminal domain NHY67_13485 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_13490 PF09084 NMT1/THI5 like NHY67_13495 PF12833 Helix-turn-helix domain NHY67_13500 PF00106 short chain dehydrogenase NHY67_13505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_13505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_13505 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_13510 PF13193 AMP-binding enzyme C-terminal domain NHY67_13510 PF00501 AMP-binding enzyme NHY67_13515 PF01613 Flavin reductase like domain NHY67_13520 PF00899 ThiF family NHY67_13525 PF03109 ABC1 family NHY67_13540 PF03814 Potassium-transporting ATPase A subunit NHY67_13550 PF02669 K+-transporting ATPase, c chain NHY67_13555 PF13493 Domain of unknown function (DUF4118) NHY67_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_13555 PF00512 His Kinase A (phospho-acceptor) domain NHY67_13555 PF02702 Osmosensitive K+ channel His kinase sensor domain NHY67_13560 PF00486 Transcriptional regulatory protein, C terminal NHY67_13560 PF00072 Response regulator receiver domain NHY67_13565 PF00120 Glutamine synthetase, catalytic domain NHY67_13580 PF07690 Major Facilitator Superfamily NHY67_13600 PF00330 Aconitase family (aconitate hydratase) NHY67_13600 PF06434 Aconitate hydratase 2 N-terminus NHY67_13600 PF11791 Aconitate B N-terminal domain NHY67_13610 PF00027 Cyclic nucleotide-binding domain NHY67_13610 PF00520 Ion transport protein NHY67_13615 PF07690 Major Facilitator Superfamily NHY67_13630 PF03466 LysR substrate binding domain NHY67_13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_13635 PF04284 Protein of unknown function (DUF441) NHY67_13645 PF00849 RNA pseudouridylate synthase NHY67_13645 PF01479 S4 domain NHY67_13660 PF01479 S4 domain NHY67_13660 PF00849 RNA pseudouridylate synthase NHY67_13665 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NHY67_13670 PF08676 MutL C terminal dimerisation domain NHY67_13670 PF01119 DNA mismatch repair protein, C-terminal domain NHY67_13680 PF17209 Hfq protein NHY67_13690 PF00881 Nitroreductase family NHY67_13700 PF00149 Calcineurin-like phosphoesterase NHY67_13705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY67_13710 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY67_13710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NHY67_13725 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NHY67_13730 PF13520 Amino acid permease NHY67_13750 PF00465 Iron-containing alcohol dehydrogenase NHY67_13765 PF06445 GyrI-like small molecule binding domain NHY67_13770 PF02110 Hydroxyethylthiazole kinase family NHY67_13785 PF01433 Peptidase family M1 domain NHY67_13785 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NHY67_13785 PF11940 Domain of unknown function (DUF3458) Ig-like fold NHY67_13815 PF01817 Chorismate mutase type II NHY67_13820 PF01037 Lrp/AsnC ligand binding domain NHY67_13835 PF00440 Bacterial regulatory proteins, tetR family NHY67_13840 PF07715 TonB-dependent Receptor Plug Domain NHY67_13840 PF00593 TonB dependent receptor NHY67_13845 PF00924 Mechanosensitive ion channel NHY67_13880 PF07715 TonB-dependent Receptor Plug Domain NHY67_13880 PF00593 TonB dependent receptor NHY67_13900 PF00005 ABC transporter NHY67_13900 PF12848 ABC transporter NHY67_13935 PF02308 MgtC family NHY67_13945 PF01037 Lrp/AsnC ligand binding domain NHY67_13950 PF01810 LysE type translocator NHY67_13955 PF00923 Transaldolase/Fructose-6-phosphate aldolase NHY67_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_13960 PF03466 LysR substrate binding domain NHY67_13970 PF00108 Thiolase, N-terminal domain NHY67_13970 PF02803 Thiolase, C-terminal domain NHY67_13980 PF01575 MaoC like domain NHY67_13995 PF07690 Major Facilitator Superfamily NHY67_14005 PF05506 Domain of unknown function (DUF756) NHY67_14005 PF04185 Phosphoesterase family NHY67_14010 PF03061 Thioesterase superfamily NHY67_14015 PF00465 Iron-containing alcohol dehydrogenase NHY67_14025 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY67_14030 PF01565 FAD binding domain NHY67_14030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NHY67_14045 PF01645 Conserved region in glutamate synthase NHY67_14120 PF12161 HsdM N-terminal domain NHY67_14120 PF02384 N-6 DNA Methylase NHY67_14150 PF01555 DNA methylase NHY67_14155 PF01555 DNA methylase NHY67_14405 PF12832 MFS_1 like family NHY67_14415 PF02785 Biotin carboxylase C-terminal domain NHY67_14415 PF00289 Biotin carboxylase, N-terminal domain NHY67_14415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY67_14420 PF00364 Biotin-requiring enzyme NHY67_14425 PF01220 Dehydroquinase class II NHY67_14445 PF00072 Response regulator receiver domain NHY67_14445 PF00486 Transcriptional regulatory protein, C terminal NHY67_14465 PF04324 BFD-like [2Fe-2S] binding domain NHY67_14465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY67_14465 PF00384 Molybdopterin oxidoreductase NHY67_14465 PF01568 Molydopterin dinucleotide binding domain NHY67_14470 PF12804 MobA-like NTP transferase domain NHY67_14475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY67_14475 PF00384 Molybdopterin oxidoreductase NHY67_14475 PF01568 Molydopterin dinucleotide binding domain NHY67_14480 PF06463 Molybdenum Cofactor Synthesis C NHY67_14480 PF04055 Radical SAM superfamily NHY67_14490 PF02391 MoaE protein NHY67_14495 PF01967 MoaC family NHY67_14495 PF00994 Probable molybdopterin binding domain NHY67_14500 PF00994 Probable molybdopterin binding domain NHY67_14500 PF03453 MoeA N-terminal region (domain I and II) NHY67_14500 PF03454 MoeA C-terminal region (domain IV) NHY67_14505 PF01638 HxlR-like helix-turn-helix NHY67_14510 PF00155 Aminotransferase class I and II NHY67_14510 PF00392 Bacterial regulatory proteins, gntR family NHY67_14515 PF00892 EamA-like transporter family NHY67_14540 PF16363 GDP-mannose 4,6 dehydratase NHY67_14545 PF00206 Lyase NHY67_14545 PF10415 Fumarase C C-terminus NHY67_14565 PF01266 FAD dependent oxidoreductase NHY67_14575 PF02542 YgbB family NHY67_14585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NHY67_14585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NHY67_14590 PF00440 Bacterial regulatory proteins, tetR family NHY67_14595 PF02954 Bacterial regulatory protein, Fis family NHY67_14595 PF00072 Response regulator receiver domain NHY67_14595 PF00158 Sigma-54 interaction domain NHY67_14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_14600 PF00512 His Kinase A (phospho-acceptor) domain NHY67_14600 PF00989 PAS fold NHY67_14605 PF04055 Radical SAM superfamily NHY67_14605 PF18693 TRAM domain NHY67_14605 PF00919 Uncharacterized protein family UPF0004 NHY67_14610 PF00696 Amino acid kinase family NHY67_14615 PF01765 Ribosome recycling factor NHY67_14620 PF01255 Putative undecaprenyl diphosphate synthase NHY67_14630 PF13288 DXP reductoisomerase C-terminal domain NHY67_14630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NHY67_14630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NHY67_14635 PF02163 Peptidase family M50 NHY67_14635 PF13180 PDZ domain NHY67_14635 PF17820 PDZ domain NHY67_14640 PF07244 Surface antigen variable number repeat NHY67_14640 PF01103 Surface antigen NHY67_14650 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_14650 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NHY67_14655 PF07977 FabA-like domain NHY67_14660 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NHY67_14660 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_14675 PF02631 RecX family NHY67_14690 PF13419 Haloacid dehalogenase-like hydrolase NHY67_14720 PF00266 Aminotransferase class-V NHY67_14725 PF00324 Amino acid permease NHY67_14740 PF05922 Peptidase inhibitor I9 NHY67_14740 PF00082 Subtilase family NHY67_14745 PF01740 STAS domain NHY67_14745 PF00916 Sulfate permease family NHY67_14750 PF02586 SOS response associated peptidase (SRAP) NHY67_14755 PF07995 Glucose / Sorbosone dehydrogenase NHY67_14765 PF03707 Bacterial signalling protein N terminal repeat NHY67_14765 PF00563 EAL domain NHY67_14765 PF00990 Diguanylate cyclase, GGDEF domain NHY67_14785 PF02378 Phosphotransferase system, EIIC NHY67_14785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NHY67_14790 PF00294 pfkB family carbohydrate kinase NHY67_14795 PF05524 PEP-utilising enzyme, N-terminal NHY67_14795 PF02896 PEP-utilising enzyme, TIM barrel domain NHY67_14795 PF00381 PTS HPr component phosphorylation site NHY67_14795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NHY67_14795 PF00391 PEP-utilising enzyme, mobile domain NHY67_14820 PF05525 Branched-chain amino acid transport protein NHY67_14825 PF00557 Metallopeptidase family M24 NHY67_14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_14830 PF03466 LysR substrate binding domain NHY67_14840 PF00462 Glutaredoxin NHY67_14845 PF00202 Aminotransferase class-III NHY67_14850 PF00571 CBS domain NHY67_14850 PF00478 IMP dehydrogenase / GMP reductase domain NHY67_14875 PF00448 SRP54-type protein, GTPase domain NHY67_14875 PF02881 SRP54-type protein, helical bundle domain NHY67_14900 PF08173 Membrane bound YbgT-like protein NHY67_14905 PF02322 Cytochrome bd terminal oxidase subunit II NHY67_14920 PF07290 Protein of unknown function (DUF1449) NHY67_14930 PF00294 pfkB family carbohydrate kinase NHY67_14945 PF02253 Phospholipase A1 NHY67_14950 PF02386 Cation transport protein NHY67_14955 PF02080 TrkA-C domain NHY67_14955 PF02254 TrkA-N domain NHY67_14965 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NHY67_14980 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY67_14980 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY67_14990 PF02617 ATP-dependent Clp protease adaptor protein ClpS NHY67_15000 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NHY67_15005 PF00793 DAHP synthetase I family NHY67_15050 PF06418 CTP synthase N-terminus NHY67_15050 PF00117 Glutamine amidotransferase class-I NHY67_15055 PF00793 DAHP synthetase I family NHY67_15060 PF00113 Enolase, C-terminal TIM barrel domain NHY67_15060 PF03952 Enolase, N-terminal domain NHY67_15065 PF04239 Protein of unknown function (DUF421) NHY67_15070 PF04977 Septum formation initiator NHY67_15075 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NHY67_15080 PF01144 Coenzyme A transferase NHY67_15090 PF02803 Thiolase, C-terminal domain NHY67_15090 PF00108 Thiolase, N-terminal domain NHY67_15095 PF10397 Adenylosuccinate lyase C-terminus NHY67_15095 PF00206 Lyase NHY67_15100 PF00561 alpha/beta hydrolase fold NHY67_15105 PF07690 Major Facilitator Superfamily NHY67_15110 PF02627 Carboxymuconolactone decarboxylase family NHY67_15115 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NHY67_15115 PF00775 Dioxygenase NHY67_15120 PF00775 Dioxygenase NHY67_15125 PF01487 Type I 3-dehydroquinase NHY67_15140 PF01011 PQQ enzyme repeat NHY67_15140 PF13360 PQQ-like domain NHY67_15150 PF04143 Sulphur transport NHY67_15160 PF00753 Metallo-beta-lactamase superfamily NHY67_15165 PF01614 Bacterial transcriptional regulator NHY67_15165 PF09339 IclR helix-turn-helix domain NHY67_15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_15170 PF03466 LysR substrate binding domain NHY67_15175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_15175 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_15175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_15200 PF07690 Major Facilitator Superfamily NHY67_15210 PF01425 Amidase NHY67_15215 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY67_15230 PF00355 Rieske [2Fe-2S] domain NHY67_15230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY67_15245 PF00175 Oxidoreductase NAD-binding domain NHY67_15245 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_15250 PF01613 Flavin reductase like domain NHY67_15260 PF02727 Copper amine oxidase, N2 domain NHY67_15260 PF01179 Copper amine oxidase, enzyme domain NHY67_15260 PF07833 Copper amine oxidase N-terminal domain NHY67_15260 PF02728 Copper amine oxidase, N3 domain NHY67_15280 PF12146 Serine aminopeptidase, S33 NHY67_15295 PF01144 Coenzyme A transferase NHY67_15300 PF04444 Catechol dioxygenase N terminus NHY67_15300 PF00775 Dioxygenase NHY67_15305 PF02426 Muconolactone delta-isomerase NHY67_15310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY67_15310 PF13378 Enolase C-terminal domain-like NHY67_15315 PF03466 LysR substrate binding domain NHY67_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_15335 PF07690 Major Facilitator Superfamily NHY67_15345 PF00171 Aldehyde dehydrogenase family NHY67_15365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_15365 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_15365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_15375 PF02954 Bacterial regulatory protein, Fis family NHY67_15375 PF06506 Propionate catabolism activator NHY67_15375 PF00158 Sigma-54 interaction domain NHY67_15380 PF13193 AMP-binding enzyme C-terminal domain NHY67_15380 PF00501 AMP-binding enzyme NHY67_15385 PF04341 Protein of unknown function, DUF485 NHY67_15395 PF00107 Zinc-binding dehydrogenase NHY67_15395 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_15400 PF00171 Aldehyde dehydrogenase family NHY67_15410 PF00561 alpha/beta hydrolase fold NHY67_15415 PF06628 Catalase-related immune-responsive NHY67_15415 PF00199 Catalase NHY67_15435 PF01047 MarR family NHY67_15445 PF00106 short chain dehydrogenase NHY67_15450 PF01872 RibD C-terminal domain NHY67_15455 PF09278 MerR, DNA binding NHY67_15455 PF00376 MerR family regulatory protein NHY67_15475 PF12706 Beta-lactamase superfamily domain NHY67_15480 PF08359 YsiA-like protein, C-terminal region NHY67_15480 PF00440 Bacterial regulatory proteins, tetR family NHY67_15490 PF00857 Isochorismatase family NHY67_15495 PF03466 LysR substrate binding domain NHY67_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_15500 PF07995 Glucose / Sorbosone dehydrogenase NHY67_15505 PF00999 Sodium/hydrogen exchanger family NHY67_15505 PF02254 TrkA-N domain NHY67_15515 PF07687 Peptidase dimerisation domain NHY67_15515 PF01546 Peptidase family M20/M25/M40 NHY67_15525 PF08479 POTRA domain, ShlB-type NHY67_15525 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NHY67_15525 PF17287 POTRA domain NHY67_15535 PF13737 Transposase DDE domain NHY67_15555 PF07690 Major Facilitator Superfamily NHY67_15560 PF04909 Amidohydrolase NHY67_15570 PF00392 Bacterial regulatory proteins, gntR family NHY67_15570 PF07702 UTRA domain NHY67_15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_15585 PF03466 LysR substrate binding domain NHY67_15610 PF01842 ACT domain NHY67_15610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY67_15610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY67_15615 PF03737 Aldolase/RraA NHY67_15665 PF00920 Dehydratase family NHY67_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_15675 PF03466 LysR substrate binding domain NHY67_15680 PF01370 NAD dependent epimerase/dehydratase family NHY67_15685 PF07690 Major Facilitator Superfamily NHY67_15690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY67_15690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY67_15710 PF00107 Zinc-binding dehydrogenase NHY67_15710 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_15720 PF01032 FecCD transport family NHY67_15745 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY67_15745 PF14572 Phosphoribosyl synthetase-associated domain NHY67_15750 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY67_15825 PF00196 Bacterial regulatory proteins, luxR family NHY67_15830 PF01425 Amidase NHY67_15840 PF07690 Major Facilitator Superfamily NHY67_15865 PF01975 Survival protein SurE NHY67_15875 PF13291 ACT domain NHY67_15875 PF04607 Region found in RelA / SpoT proteins NHY67_15875 PF02824 TGS domain NHY67_15930 PF12146 Serine aminopeptidase, S33 NHY67_15935 PF12833 Helix-turn-helix domain NHY67_15935 PF02311 AraC-like ligand binding domain NHY67_15945 PF00672 HAMP domain NHY67_15945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_15945 PF00512 His Kinase A (phospho-acceptor) domain NHY67_15945 PF16527 Two-component sensor protein CpxA, periplasmic domain NHY67_15950 PF00486 Transcriptional regulatory protein, C terminal NHY67_15950 PF00072 Response regulator receiver domain NHY67_15955 PF00529 HlyD membrane-fusion protein of T1SS NHY67_15955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY67_15960 PF00873 AcrB/AcrD/AcrF family NHY67_15970 PF12146 Serine aminopeptidase, S33 NHY67_15975 PF00743 Flavin-binding monooxygenase-like NHY67_15980 PF01593 Flavin containing amine oxidoreductase NHY67_15995 PF01266 FAD dependent oxidoreductase NHY67_16015 PF16970 Type-1 fimbrial protein, A NHY67_16025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY67_16025 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY67_16035 PF00419 Fimbrial protein NHY67_16055 PF00199 Catalase NHY67_16085 PF01244 Membrane dipeptidase (Peptidase family M19) NHY67_16090 PF04055 Radical SAM superfamily NHY67_16090 PF13186 Iron-sulfur cluster-binding domain NHY67_16095 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NHY67_16100 PF03070 TENA/THI-4/PQQC family NHY67_16105 PF12706 Beta-lactamase superfamily domain NHY67_16110 PF08042 PqqA family NHY67_16115 PF02503 Polyphosphate kinase middle domain NHY67_16115 PF17941 Polyphosphate kinase C-terminal domain 1 NHY67_16115 PF13089 Polyphosphate kinase N-terminal domain NHY67_16115 PF13090 Polyphosphate kinase C-terminal domain 2 NHY67_16120 PF00149 Calcineurin-like phosphoesterase NHY67_16135 PF00106 short chain dehydrogenase NHY67_16140 PF00005 ABC transporter NHY67_16140 PF03459 TOBE domain NHY67_16145 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_16155 PF03459 TOBE domain NHY67_16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_16160 PF00355 Rieske [2Fe-2S] domain NHY67_16160 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY67_16165 PF00866 Ring hydroxylating beta subunit NHY67_16170 PF00970 Oxidoreductase FAD-binding domain NHY67_16170 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_16170 PF00175 Oxidoreductase NAD-binding domain NHY67_16175 PF12833 Helix-turn-helix domain NHY67_16175 PF14525 AraC-binding-like domain NHY67_16185 PF01613 Flavin reductase like domain NHY67_16200 PF01738 Dienelactone hydrolase family NHY67_16210 PF06719 AraC-type transcriptional regulator N-terminus NHY67_16210 PF12833 Helix-turn-helix domain NHY67_16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_16235 PF03466 LysR substrate binding domain NHY67_16240 PF01144 Coenzyme A transferase NHY67_16245 PF01144 Coenzyme A transferase NHY67_16255 PF02803 Thiolase, C-terminal domain NHY67_16255 PF00108 Thiolase, N-terminal domain NHY67_16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_16265 PF03466 LysR substrate binding domain NHY67_16280 PF00206 Lyase NHY67_16280 PF10415 Fumarase C C-terminus NHY67_16305 PF00005 ABC transporter NHY67_16315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY67_16330 PF07702 UTRA domain NHY67_16330 PF00392 Bacterial regulatory proteins, gntR family NHY67_16340 PF02525 Flavodoxin-like fold NHY67_16345 PF01638 HxlR-like helix-turn-helix NHY67_16365 PF01925 Sulfite exporter TauE/SafE NHY67_16380 PF04273 Putative phosphatase (DUF442) NHY67_16380 PF00753 Metallo-beta-lactamase superfamily NHY67_16385 PF00072 Response regulator receiver domain NHY67_16385 PF02954 Bacterial regulatory protein, Fis family NHY67_16385 PF00158 Sigma-54 interaction domain NHY67_16390 PF01062 Bestrophin, RFP-TM, chloride channel NHY67_16415 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_16415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY67_16420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY67_16420 PF00364 Biotin-requiring enzyme NHY67_16420 PF02817 e3 binding domain NHY67_16425 PF02779 Transketolase, pyrimidine binding domain NHY67_16425 PF02780 Transketolase, C-terminal domain NHY67_16435 PF04055 Radical SAM superfamily NHY67_16450 PF00990 Diguanylate cyclase, GGDEF domain NHY67_16450 PF08448 PAS fold NHY67_16455 PF01264 Chorismate synthase NHY67_16460 PF05175 Methyltransferase small domain NHY67_16465 PF00291 Pyridoxal-phosphate dependent enzyme NHY67_16475 PF17862 AAA+ lid domain NHY67_16475 PF01434 Peptidase family M41 NHY67_16475 PF00004 ATPase family associated with various cellular activities (AAA) NHY67_16485 PF05166 YcgL domain NHY67_16505 PF00570 HRDC domain NHY67_16505 PF01612 3'-5' exonuclease NHY67_16510 PF02132 RecR protein NHY67_16510 PF13662 Toprim domain NHY67_16515 PF02575 YbaB/EbfC DNA-binding family NHY67_16525 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY67_16530 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY67_16535 PF00561 alpha/beta hydrolase fold NHY67_16540 PF08241 Methyltransferase domain NHY67_16570 PF01230 HIT domain NHY67_16610 PF00005 ABC transporter NHY67_16615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY67_16625 PF02684 Lipid-A-disaccharide synthetase NHY67_16650 PF01925 Sulfite exporter TauE/SafE NHY67_16655 PF00793 DAHP synthetase I family NHY67_16660 PF02654 Cobalamin-5-phosphate synthase NHY67_16675 PF02277 Phosphoribosyltransferase NHY67_16680 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NHY67_16690 PF13419 Haloacid dehalogenase-like hydrolase NHY67_16715 PF07715 TonB-dependent Receptor Plug Domain NHY67_16715 PF00593 TonB dependent receptor NHY67_16735 PF04183 IucA / IucC family NHY67_16735 PF06276 Ferric iron reductase FhuF-like transporter NHY67_16745 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY67_16755 PF04073 Aminoacyl-tRNA editing domain NHY67_16765 PF03109 ABC1 family NHY67_16770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_16770 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_16770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_16785 PF12852 Cupin NHY67_16785 PF12833 Helix-turn-helix domain NHY67_16810 PF02082 Transcriptional regulator NHY67_16815 PF00266 Aminotransferase class-V NHY67_16820 PF01592 NifU-like N terminal domain NHY67_16830 PF07743 HSCB C-terminal oligomerisation domain NHY67_16830 PF00226 DnaJ domain NHY67_16835 PF00012 Hsp70 protein NHY67_16840 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_16855 PF03461 TRCF domain NHY67_16855 PF02559 CarD-like/TRCF domain NHY67_16855 PF00270 DEAD/DEAH box helicase NHY67_16855 PF17757 UvrB interaction domain NHY67_16855 PF00271 Helicase conserved C-terminal domain NHY67_16875 PF03737 Aldolase/RraA NHY67_16880 PF13460 NAD(P)H-binding NHY67_16885 PF01649 Ribosomal protein S20 NHY67_16895 PF00459 Inositol monophosphatase family NHY67_16910 PF00005 ABC transporter NHY67_16910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY67_16915 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_16920 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_16945 PF07715 TonB-dependent Receptor Plug Domain NHY67_16945 PF00593 TonB dependent receptor NHY67_16955 PF01618 MotA/TolQ/ExbB proton channel family NHY67_16960 PF02472 Biopolymer transport protein ExbD/TolR NHY67_16965 PF02472 Biopolymer transport protein ExbD/TolR NHY67_16975 PF01274 Malate synthase NHY67_16980 PF03969 AFG1-like ATPase NHY67_16990 PF00743 Flavin-binding monooxygenase-like NHY67_17000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NHY67_17010 PF00216 Bacterial DNA-binding protein NHY67_17015 PF00575 S1 RNA binding domain NHY67_17020 PF02224 Cytidylate kinase NHY67_17030 PF14437 MafB19-like deaminase NHY67_17040 PF03167 Uracil DNA glycosylase superfamily NHY67_17055 PF07963 Prokaryotic N-terminal methylation motif NHY67_17055 PF11612 Type II secretion system (T2SS), protein J NHY67_17060 PF02501 Type II secretion system (T2SS), protein I NHY67_17060 PF07963 Prokaryotic N-terminal methylation motif NHY67_17075 PF01026 TatD related DNase NHY67_17085 PF09115 DNA polymerase III, delta subunit, C terminal NHY67_17090 PF02348 Cytidylyltransferase NHY67_17095 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NHY67_17100 PF00664 ABC transporter transmembrane region NHY67_17100 PF00005 ABC transporter NHY67_17110 PF01618 MotA/TolQ/ExbB proton channel family NHY67_17120 PF13614 AAA domain NHY67_17125 PF02527 rRNA small subunit methyltransferase G NHY67_17130 PF00483 Nucleotidyl transferase NHY67_17135 PF01636 Phosphotransferase enzyme family NHY67_17145 PF00639 PPIC-type PPIASE domain NHY67_17145 PF09312 SurA N-terminal domain NHY67_17150 PF01116 Fructose-bisphosphate aldolase class-II NHY67_17160 PF00162 Phosphoglycerate kinase NHY67_17170 PF02545 Maf-like protein NHY67_17175 PF08007 Cupin superfamily protein NHY67_17195 PF00375 Sodium:dicarboxylate symporter family NHY67_17200 PF06912 Protein of unknown function (DUF1275) NHY67_17205 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NHY67_17210 PF00005 ABC transporter NHY67_17210 PF00664 ABC transporter transmembrane region NHY67_17220 PF12833 Helix-turn-helix domain NHY67_17220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NHY67_17225 PF01597 Glycine cleavage H-protein NHY67_17230 PF02146 Sir2 family NHY67_17235 PF00474 Sodium:solute symporter family NHY67_17240 PF01037 Lrp/AsnC ligand binding domain NHY67_17275 PF04264 YceI-like domain NHY67_17310 PF00905 Penicillin binding protein transpeptidase domain NHY67_17325 PF02075 Crossover junction endodeoxyribonuclease RuvC NHY67_17330 PF01256 Carbohydrate kinase NHY67_17330 PF03853 YjeF-related protein N-terminus NHY67_17335 PF08331 Domain of unknown function (DUF1730) NHY67_17340 PF06968 Biotin and Thiamin Synthesis associated domain NHY67_17340 PF04055 Radical SAM superfamily NHY67_17355 PF16970 Type-1 fimbrial protein, A NHY67_17360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY67_17360 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY67_17365 PF13953 PapC C-terminal domain NHY67_17365 PF13954 PapC N-terminal domain NHY67_17365 PF00577 Outer membrane usher protein NHY67_17395 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY67_17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_17405 PF03466 LysR substrate binding domain NHY67_17425 PF00440 Bacterial regulatory proteins, tetR family NHY67_17435 PF01709 Transcriptional regulator NHY67_17440 PF01037 Lrp/AsnC ligand binding domain NHY67_17450 PF00005 ABC transporter NHY67_17455 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_17460 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_17475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_17475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY67_17485 PF00296 Luciferase-like monooxygenase NHY67_17490 PF03180 NLPA lipoprotein NHY67_17495 PF03180 NLPA lipoprotein NHY67_17500 PF00005 ABC transporter NHY67_17500 PF09383 NIL domain NHY67_17505 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_17510 PF06071 Protein of unknown function (DUF933) NHY67_17510 PF01926 50S ribosome-binding GTPase NHY67_17535 PF03591 AzlC protein NHY67_17540 PF05437 Branched-chain amino acid transport protein (AzlD) NHY67_17550 PF02222 ATP-grasp domain NHY67_17570 PF12852 Cupin NHY67_17570 PF12833 Helix-turn-helix domain NHY67_17575 PF00255 Glutathione peroxidase NHY67_17580 PF01641 SelR domain NHY67_17585 PF00155 Aminotransferase class I and II NHY67_17590 PF00375 Sodium:dicarboxylate symporter family NHY67_17595 PF00710 Asparaginase, N-terminal NHY67_17595 PF17763 Glutaminase/Asparaginase C-terminal domain NHY67_17605 PF00588 SpoU rRNA Methylase family NHY67_17610 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_17625 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_17625 PF13192 Thioredoxin domain NHY67_17645 PF01758 Sodium Bile acid symporter family NHY67_17650 PF01022 Bacterial regulatory protein, arsR family NHY67_17655 PF03960 ArsC family NHY67_17665 PF13382 Adenine deaminase C-terminal domain NHY67_17665 PF01979 Amidohydrolase family NHY67_17675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_17675 PF03466 LysR substrate binding domain NHY67_17690 PF01177 Asp/Glu/Hydantoin racemase NHY67_17700 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_17705 PF00005 ABC transporter NHY67_17710 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY67_17720 PF00083 Sugar (and other) transporter NHY67_17730 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_17730 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY67_17730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_17740 PF01654 Cytochrome bd terminal oxidase subunit I NHY67_17745 PF02322 Cytochrome bd terminal oxidase subunit II NHY67_17755 PF00155 Aminotransferase class I and II NHY67_17755 PF00392 Bacterial regulatory proteins, gntR family NHY67_17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_17760 PF03466 LysR substrate binding domain NHY67_17775 PF00698 Acyl transferase domain NHY67_17780 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NHY67_17795 PF06857 Malonate decarboxylase delta subunit (MdcD) NHY67_17800 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NHY67_17805 PF16957 Malonate decarboxylase, alpha subunit, transporter NHY67_17810 PF07690 Major Facilitator Superfamily NHY67_17825 PF00392 Bacterial regulatory proteins, gntR family NHY67_17825 PF00155 Aminotransferase class I and II NHY67_17830 PF04172 LrgB-like family NHY67_17835 PF03788 LrgA family NHY67_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_17840 PF03466 LysR substrate binding domain NHY67_17845 PF14834 Glutathione S-transferase, C-terminal domain NHY67_17845 PF02798 Glutathione S-transferase, N-terminal domain NHY67_17850 PF02798 Glutathione S-transferase, N-terminal domain NHY67_17855 PF03466 LysR substrate binding domain NHY67_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_17870 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_17880 PF00266 Aminotransferase class-V NHY67_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_17895 PF03466 LysR substrate binding domain NHY67_17905 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY67_17910 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY67_17915 PF00005 ABC transporter NHY67_17920 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_17925 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_17940 PF00072 Response regulator receiver domain NHY67_17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY67_17945 PF00512 His Kinase A (phospho-acceptor) domain NHY67_17945 PF09308 LuxQ, periplasmic NHY67_17945 PF00072 Response regulator receiver domain NHY67_17955 PF01037 Lrp/AsnC ligand binding domain NHY67_17955 PF13404 AsnC-type helix-turn-helix domain NHY67_17965 PF00717 Peptidase S24-like NHY67_18005 PF18011 C-terminal domain found in long catalases NHY67_18005 PF06628 Catalase-related immune-responsive NHY67_18005 PF00199 Catalase NHY67_18015 PF00994 Probable molybdopterin binding domain NHY67_18015 PF18146 Damage-inducible protein CinA KH domain NHY67_18015 PF02464 Competence-damaged protein NHY67_18050 PF03466 LysR substrate binding domain NHY67_18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_18070 PF00501 AMP-binding enzyme NHY67_18070 PF13193 AMP-binding enzyme C-terminal domain NHY67_18090 PF00378 Enoyl-CoA hydratase/isomerase NHY67_18100 PF00682 HMGL-like NHY67_18105 PF03466 LysR substrate binding domain NHY67_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_18120 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_18120 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY67_18120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_18120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_18140 PF01144 Coenzyme A transferase NHY67_18145 PF01144 Coenzyme A transferase NHY67_18150 PF07690 Major Facilitator Superfamily NHY67_18155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_18155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_18155 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_18170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY67_18170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY67_18170 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY67_18175 PF00108 Thiolase, N-terminal domain NHY67_18175 PF02803 Thiolase, C-terminal domain NHY67_18180 PF09339 IclR helix-turn-helix domain NHY67_18185 PF07690 Major Facilitator Superfamily NHY67_18195 PF00378 Enoyl-CoA hydratase/isomerase NHY67_18200 PF09339 IclR helix-turn-helix domain NHY67_18210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY67_18210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY67_18210 PF02770 Acyl-CoA dehydrogenase, middle domain NHY67_18215 PF07690 Major Facilitator Superfamily NHY67_18220 PF13419 Haloacid dehalogenase-like hydrolase NHY67_18230 PF01266 FAD dependent oxidoreductase NHY67_18235 PF00528 Binding-protein-dependent transport system inner membrane component NHY67_18240 PF00005 ABC transporter NHY67_18240 PF08402 TOBE domain NHY67_18250 PF00392 Bacterial regulatory proteins, gntR family NHY67_18250 PF07702 UTRA domain NHY67_18255 PF01494 FAD binding domain NHY67_18260 PF09339 IclR helix-turn-helix domain NHY67_18260 PF01614 Bacterial transcriptional regulator NHY67_18265 PF02525 Flavodoxin-like fold NHY67_18270 PF03466 LysR substrate binding domain NHY67_18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_18275 PF02627 Carboxymuconolactone decarboxylase family NHY67_18290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY67_18315 PF00296 Luciferase-like monooxygenase NHY67_18320 PF01613 Flavin reductase like domain NHY67_18325 PF12697 Alpha/beta hydrolase family NHY67_18345 PF01292 Prokaryotic cytochrome b561 NHY67_18385 PF03061 Thioesterase superfamily NHY67_18390 PF00132 Bacterial transferase hexapeptide (six repeats) NHY67_18400 PF14535 AMP-binding enzyme C-terminal domain NHY67_18400 PF00501 AMP-binding enzyme NHY67_18405 PF00108 Thiolase, N-terminal domain NHY67_18405 PF02803 Thiolase, C-terminal domain NHY67_18410 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY67_18410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY67_18410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY67_18415 PF00378 Enoyl-CoA hydratase/isomerase NHY67_18420 PF00378 Enoyl-CoA hydratase/isomerase NHY67_18425 PF00970 Oxidoreductase FAD-binding domain NHY67_18425 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY67_18425 PF00175 Oxidoreductase NAD-binding domain NHY67_18430 PF01883 Iron-sulfur cluster assembly protein NHY67_18440 PF06243 Phenylacetic acid degradation B NHY67_18445 PF05138 Phenylacetic acid catabolic protein NHY67_18450 PF00171 Aldehyde dehydrogenase family NHY67_18450 PF01575 MaoC like domain NHY67_18460 PF13520 Amino acid permease NHY67_18465 PF00171 Aldehyde dehydrogenase family NHY67_18470 PF00083 Sugar (and other) transporter NHY67_18480 PF04324 BFD-like [2Fe-2S] binding domain NHY67_18480 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY67_18490 PF01266 FAD dependent oxidoreductase NHY67_18495 PF05544 Proline racemase NHY67_18500 PF00392 Bacterial regulatory proteins, gntR family NHY67_18510 PF00701 Dihydrodipicolinate synthetase family NHY67_18520 PF09278 MerR, DNA binding NHY67_18520 PF00376 MerR family regulatory protein NHY67_18535 PF02677 Epoxyqueuosine reductase QueH NHY67_18550 PF07690 Major Facilitator Superfamily NHY67_18555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY67_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_18565 PF03466 LysR substrate binding domain NHY67_18590 PF06812 ImpA, N-terminal, type VI secretion system NHY67_18620 PF01389 OmpA-like transmembrane domain NHY67_18620 PF00691 OmpA family NHY67_18645 PF05947 Type VI secretion system, TssF NHY67_18660 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NHY67_18685 PF00005 ABC transporter NHY67_18690 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY67_18695 PF01425 Amidase NHY67_18700 PF08753 NikR C terminal nickel binding domain NHY67_18700 PF01402 Ribbon-helix-helix protein, copG family NHY67_18720 PF02525 Flavodoxin-like fold NHY67_18740 PF13823 Alcohol dehydrogenase GroES-associated NHY67_18740 PF00107 Zinc-binding dehydrogenase NHY67_18740 PF08240 Alcohol dehydrogenase GroES-like domain NHY67_18770 PF00654 Voltage gated chloride channel NHY67_18775 PF02785 Biotin carboxylase C-terminal domain NHY67_18775 PF00289 Biotin carboxylase, N-terminal domain NHY67_18775 PF00364 Biotin-requiring enzyme NHY67_18775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY67_18785 PF07286 Protein of unknown function (DUF1445) NHY67_18790 PF03746 LamB/YcsF family NHY67_18795 PF01566 Natural resistance-associated macrophage protein NHY67_18800 PF03466 LysR substrate binding domain NHY67_18800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY67_18815 PF03527 RHS protein NHY67_18815 PF05593 RHS Repeat NHY67_18820 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY67_18820 PF04717 Type VI secretion system, phage-baseplate injector NHY67_18820 PF13296 Putative type VI secretion system Rhs element Vgr NHY67_18830 PF13419 Haloacid dehalogenase-like hydrolase NHY67_18850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY67_18850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY67_18870 PF07690 Major Facilitator Superfamily NHY67_18885 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY67_18895 PF00892 EamA-like transporter family NHY67_18900 PF01037 Lrp/AsnC ligand binding domain NHY67_18905 PF01624 MutS domain I NHY67_18905 PF05188 MutS domain II NHY67_18905 PF05192 MutS domain III NHY67_18905 PF05190 MutS family domain IV NHY67_18905 PF00488 MutS domain V NHY67_18925 PF01596 O-methyltransferase NHY67_18935 PF18272 single-stranded DNA binding TraI N-terminal subdomain NHY67_18935 PF07057 DNA helicase TraI NHY67_18935 PF18340 DNA relaxase TraI 2B/2B-like domain NHY67_18935 PF08751 TrwC relaxase NHY67_18985 PF02796 Helix-turn-helix domain of resolvase NHY67_18985 PF00239 Resolvase, N terminal domain NHY67_18995 PF01464 Transglycosylase SLT domain NHY67_19040 PF13098 Thioredoxin-like domain NHY67_19040 PF10411 Disulfide bond isomerase protein N-terminus NHY67_19080 PF06834 TraU protein NHY67_19100 PF06986 Type-1V conjugative transfer system mating pair stabilisation NHY67_19115 PF06122 Conjugative relaxosome accessory transposon protein NHY67_19235 PF00565 Staphylococcal nuclease homologue NHY67_19245 PF00816 H-NS histone family NHY67_19295 PF13614 AAA domain NHY67_19300 PF02195 ParB-like nuclease domain NHY67_19300 PF17762 HTH domain found in ParB protein NHY67_19315 PF05816 Toxic anion resistance protein (TelA)