locus-tag class description NHY68_00020 PF13419 Haloacid dehalogenase-like hydrolase NHY68_00040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY68_00040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY68_00075 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY68_00080 PF00563 EAL domain NHY68_00080 PF00990 Diguanylate cyclase, GGDEF domain NHY68_00080 PF03707 Bacterial signalling protein N terminal repeat NHY68_00085 PF00892 EamA-like transporter family NHY68_00090 PF01037 Lrp/AsnC ligand binding domain NHY68_00105 PF11953 Domain of unknown function (DUF3470) NHY68_00105 PF00037 4Fe-4S binding domain NHY68_00115 PF01596 O-methyltransferase NHY68_00125 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_00130 PF01205 Uncharacterized protein family UPF0029 NHY68_00145 PF02321 Outer membrane efflux protein NHY68_00150 PF00005 ABC transporter NHY68_00150 PF12399 Branched-chain amino acid ATP-binding cassette transporter NHY68_00170 PF00571 CBS domain NHY68_00170 PF01380 SIS domain NHY68_00175 PF09190 DALR domain NHY68_00175 PF01406 tRNA synthetases class I (C) catalytic domain NHY68_00200 PF01638 HxlR-like helix-turn-helix NHY68_00230 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY68_00230 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY68_00240 PF00313 'Cold-shock' DNA-binding domain NHY68_00275 PF13742 OB-fold nucleic acid binding domain NHY68_00275 PF02601 Exonuclease VII, large subunit NHY68_00310 PF09278 MerR, DNA binding NHY68_00310 PF00376 MerR family regulatory protein NHY68_00340 PF00866 Ring hydroxylating beta subunit NHY68_00345 PF00970 Oxidoreductase FAD-binding domain NHY68_00345 PF00175 Oxidoreductase NAD-binding domain NHY68_00345 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_00350 PF00106 short chain dehydrogenase NHY68_00355 PF03594 Benzoate membrane transport protein NHY68_00370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NHY68_00370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NHY68_00375 PF00270 DEAD/DEAH box helicase NHY68_00375 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NHY68_00375 PF00271 Helicase conserved C-terminal domain NHY68_00375 PF04408 Helicase associated domain (HA2) NHY68_00375 PF11898 Domain of unknown function (DUF3418) NHY68_00380 PF00578 AhpC/TSA family NHY68_00380 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY68_00410 PF02798 Glutathione S-transferase, N-terminal domain NHY68_00410 PF00043 Glutathione S-transferase, C-terminal domain NHY68_00420 PF02390 Putative methyltransferase NHY68_00425 PF00043 Glutathione S-transferase, C-terminal domain NHY68_00425 PF13417 Glutathione S-transferase, N-terminal domain NHY68_00435 PF00691 OmpA family NHY68_00435 PF13488 Glycine zipper NHY68_00440 PF01979 Amidohydrolase family NHY68_00455 PF02926 THUMP domain NHY68_00455 PF01170 Putative RNA methylase family UPF0020 NHY68_00455 PF10672 S-adenosylmethionine-dependent methyltransferase NHY68_00470 PF00004 ATPase family associated with various cellular activities (AAA) NHY68_00470 PF07724 AAA domain (Cdc48 subfamily) NHY68_00470 PF02861 Clp amino terminal domain, pathogenicity island component NHY68_00470 PF10431 C-terminal, D2-small domain, of ClpB protein NHY68_00470 PF17871 AAA lid domain NHY68_00490 PF02566 OsmC-like protein NHY68_00500 PF13545 Crp-like helix-turn-helix domain NHY68_00500 PF00027 Cyclic nucleotide-binding domain NHY68_00510 PF00248 Aldo/keto reductase family NHY68_00530 PF13393 Histidyl-tRNA synthetase NHY68_00535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY68_00535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY68_00550 PF02599 Global regulator protein family NHY68_00565 PF01292 Prokaryotic cytochrome b561 NHY68_00570 PF00962 Adenosine/AMP deaminase NHY68_00590 PF00106 short chain dehydrogenase NHY68_00600 PF17954 Quercetinase C-terminal cupin domain NHY68_00600 PF02678 Pirin NHY68_00605 PF17932 Tetracyclin repressor-like, C-terminal domain NHY68_00605 PF00440 Bacterial regulatory proteins, tetR family NHY68_00615 PF00106 short chain dehydrogenase NHY68_00635 PF00239 Resolvase, N terminal domain NHY68_00635 PF02796 Helix-turn-helix domain of resolvase NHY68_00645 PF13610 DDE domain NHY68_00655 PF02796 Helix-turn-helix domain of resolvase NHY68_00655 PF00239 Resolvase, N terminal domain NHY68_00660 PF13610 DDE domain NHY68_00670 PF04958 Arginine N-succinyltransferase beta subunit NHY68_00675 PF00202 Aminotransferase class-III NHY68_00685 PF00171 Aldehyde dehydrogenase family NHY68_00695 PF00392 Bacterial regulatory proteins, gntR family NHY68_00695 PF07729 FCD domain NHY68_00710 PF01266 FAD dependent oxidoreductase NHY68_00715 PF00324 Amino acid permease NHY68_00755 PF05593 RHS Repeat NHY68_00755 PF03527 RHS protein NHY68_00780 PF03180 NLPA lipoprotein NHY68_00785 PF05987 Bacterial protein of unknown function (DUF898) NHY68_00800 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_00800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY68_00805 PF00764 Arginosuccinate synthase NHY68_00810 PF00990 Diguanylate cyclase, GGDEF domain NHY68_00810 PF01590 GAF domain NHY68_00810 PF00563 EAL domain NHY68_00810 PF00360 Phytochrome region NHY68_00820 PF00929 Exonuclease NHY68_00830 PF00593 TonB dependent receptor NHY68_00830 PF07715 TonB-dependent Receptor Plug Domain NHY68_00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_00835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY68_00855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NHY68_00865 PF00929 Exonuclease NHY68_00875 PF00293 NUDIX domain NHY68_00875 PF09297 NADH pyrophosphatase zinc ribbon domain NHY68_00885 PF04972 BON domain NHY68_00890 PF02021 Uncharacterised protein family UPF0102 NHY68_00915 PF00324 Amino acid permease NHY68_00920 PF00171 Aldehyde dehydrogenase family NHY68_00925 PF00202 Aminotransferase class-III NHY68_00930 PF03466 LysR substrate binding domain NHY68_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_00980 PF01165 Ribosomal protein S21 NHY68_00985 PF09424 Yqey-like protein NHY68_00990 PF01435 Peptidase family M48 NHY68_00995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY68_00995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY68_01010 PF00156 Phosphoribosyl transferase domain NHY68_01015 PF02674 Colicin V production protein NHY68_01020 PF01180 Dihydroorotate dehydrogenase NHY68_01040 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NHY68_01040 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NHY68_01045 PF00881 Nitroreductase family NHY68_01055 PF00270 DEAD/DEAH box helicase NHY68_01055 PF00271 Helicase conserved C-terminal domain NHY68_01060 PF00313 'Cold-shock' DNA-binding domain NHY68_01075 PF04542 Sigma-70 region 2 NHY68_01075 PF04545 Sigma-70, region 4 NHY68_01075 PF00140 Sigma-70 factor, region 1.2 NHY68_01080 PF04241 Protein of unknown function (DUF423) NHY68_01090 PF05690 Thiazole biosynthesis protein ThiG NHY68_01100 PF03883 Peroxide stress protein YaaA NHY68_01115 PF01546 Peptidase family M20/M25/M40 NHY68_01115 PF07687 Peptidase dimerisation domain NHY68_01125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NHY68_01135 PF00756 Putative esterase NHY68_01140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_01140 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_01140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_01145 PF00375 Sodium:dicarboxylate symporter family NHY68_01150 PF02885 Glycosyl transferase family, helical bundle domain NHY68_01150 PF00591 Glycosyl transferase family, a/b domain NHY68_01155 PF07023 Protein of unknown function (DUF1315) NHY68_01160 PF01513 ATP-NAD kinase NHY68_01165 PF00912 Transglycosylase NHY68_01165 PF00905 Penicillin binding protein transpeptidase domain NHY68_01165 PF14814 Bifunctional transglycosylase second domain NHY68_01175 PF00293 NUDIX domain NHY68_01185 PF08521 Two-component sensor kinase N-terminal NHY68_01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_01185 PF00512 His Kinase A (phospho-acceptor) domain NHY68_01190 PF00072 Response regulator receiver domain NHY68_01190 PF00486 Transcriptional regulatory protein, C terminal NHY68_01200 PF00437 Type II/IV secretion system protein NHY68_01200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NHY68_01210 PF18389 TrmO C-terminal domain NHY68_01210 PF01980 tRNA-methyltransferase O NHY68_01215 PF00175 Oxidoreductase NAD-binding domain NHY68_01215 PF00970 Oxidoreductase FAD-binding domain NHY68_01220 PF02567 Phenazine biosynthesis-like protein NHY68_01225 PF00392 Bacterial regulatory proteins, gntR family NHY68_01225 PF00155 Aminotransferase class I and II NHY68_01230 PF16325 Peptidase family U32 C-terminal domain NHY68_01230 PF01136 Peptidase family U32 NHY68_01235 PF00037 4Fe-4S binding domain NHY68_01240 PF00893 Small Multidrug Resistance protein NHY68_01250 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_01255 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_01260 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY68_01265 PF03466 LysR substrate binding domain NHY68_01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_01270 PF13533 Biotin-lipoyl like NHY68_01275 PF00873 AcrB/AcrD/AcrF family NHY68_01280 PF02321 Outer membrane efflux protein NHY68_01285 PF00464 Serine hydroxymethyltransferase NHY68_01315 PF00005 ABC transporter NHY68_01320 PF01061 ABC-2 type transporter NHY68_01325 PF14489 QueF-like protein NHY68_01325 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NHY68_01335 PF01098 Cell cycle protein NHY68_01345 PF03330 Lytic transglycolase NHY68_01345 PF05036 Sporulation related domain NHY68_01365 PF12833 Helix-turn-helix domain NHY68_01375 PF00889 Elongation factor TS NHY68_01380 PF00318 Ribosomal protein S2 NHY68_01385 PF00557 Metallopeptidase family M24 NHY68_01410 PF04055 Radical SAM superfamily NHY68_01430 PF05221 S-adenosyl-L-homocysteine hydrolase NHY68_01430 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NHY68_01440 PF04452 RNA methyltransferase NHY68_01445 PF03707 Bacterial signalling protein N terminal repeat NHY68_01445 PF00563 EAL domain NHY68_01445 PF00990 Diguanylate cyclase, GGDEF domain NHY68_01450 PF03949 Malic enzyme, NAD binding domain NHY68_01450 PF01515 Phosphate acetyl/butaryl transferase NHY68_01450 PF00390 Malic enzyme, N-terminal domain NHY68_01455 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY68_01455 PF01743 Poly A polymerase head domain NHY68_01460 PF13180 PDZ domain NHY68_01465 PF01784 NIF3 (NGG1p interacting factor 3) NHY68_01470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NHY68_01470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NHY68_01505 PF01040 UbiA prenyltransferase family NHY68_01510 PF04345 Chorismate lyase NHY68_01515 PF00120 Glutamine synthetase, catalytic domain NHY68_01515 PF03951 Glutamine synthetase, beta-Grasp domain NHY68_01530 PF00117 Glutamine amidotransferase class-I NHY68_01535 PF01433 Peptidase family M1 domain NHY68_01535 PF11838 ERAP1-like C-terminal domain NHY68_01540 PF07715 TonB-dependent Receptor Plug Domain NHY68_01540 PF00593 TonB dependent receptor NHY68_01545 PF02885 Glycosyl transferase family, helical bundle domain NHY68_01545 PF00591 Glycosyl transferase family, a/b domain NHY68_01550 PF00218 Indole-3-glycerol phosphate synthase NHY68_01570 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_01570 PF01799 [2Fe-2S] binding domain NHY68_01575 PF01227 GTP cyclohydrolase I NHY68_01585 PF00144 Beta-lactamase NHY68_01600 PF05675 Protein of unknown function (DUF817) NHY68_01605 PF01208 Uroporphyrinogen decarboxylase (URO-D) NHY68_01615 PF00425 chorismate binding enzyme NHY68_01625 PF00975 Thioesterase domain NHY68_01630 PF00005 ABC transporter NHY68_01645 PF00282 Pyridoxal-dependent decarboxylase conserved domain NHY68_01655 PF00501 AMP-binding enzyme NHY68_01655 PF13193 AMP-binding enzyme C-terminal domain NHY68_01660 PF00501 AMP-binding enzyme NHY68_01660 PF00550 Phosphopantetheine attachment site NHY68_01660 PF00668 Condensation domain NHY68_01665 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY68_01670 PF07715 TonB-dependent Receptor Plug Domain NHY68_01670 PF00593 TonB dependent receptor NHY68_01675 PF01497 Periplasmic binding protein NHY68_01680 PF00005 ABC transporter NHY68_01685 PF01032 FecCD transport family NHY68_01690 PF01032 FecCD transport family NHY68_01710 PF08348 YheO-like PAS domain NHY68_01710 PF13309 HTH domain NHY68_01720 PF17954 Quercetinase C-terminal cupin domain NHY68_01720 PF02678 Pirin NHY68_01740 PF00440 Bacterial regulatory proteins, tetR family NHY68_01745 PF00698 Acyl transferase domain NHY68_01745 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_01745 PF08990 Erythronolide synthase docking NHY68_01745 PF16197 Ketoacyl-synthetase C-terminal extension NHY68_01745 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY68_01745 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY68_01745 PF08659 KR domain NHY68_01745 PF00550 Phosphopantetheine attachment site NHY68_01745 PF14765 Polyketide synthase dehydratase NHY68_01745 PF09277 Erythronolide synthase, docking NHY68_01750 PF13378 Enolase C-terminal domain-like NHY68_01750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY68_01755 PF00083 Sugar (and other) transporter NHY68_01760 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NHY68_01770 PF00892 EamA-like transporter family NHY68_01790 PF01266 FAD dependent oxidoreductase NHY68_01790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NHY68_01795 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_01795 PF18113 Rubredoxin binding C-terminal domain NHY68_01805 PF00171 Aldehyde dehydrogenase family NHY68_01810 PF00355 Rieske [2Fe-2S] domain NHY68_01810 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY68_01815 PF02028 BCCT, betaine/carnitine/choline family transporter NHY68_01820 PF02028 BCCT, betaine/carnitine/choline family transporter NHY68_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_01825 PF03466 LysR substrate binding domain NHY68_01830 PF00324 Amino acid permease NHY68_01835 PF00171 Aldehyde dehydrogenase family NHY68_01850 PF06018 CodY GAF-like domain NHY68_01850 PF17853 GGDEF-like domain NHY68_01850 PF13556 PucR C-terminal helix-turn-helix domain NHY68_01885 PF04328 Selenoprotein, putative NHY68_01890 PF02554 Carbon starvation protein CstA NHY68_01890 PF13722 5TM C-terminal transporter carbon starvation CstA NHY68_01895 PF01132 Elongation factor P (EF-P) OB domain NHY68_01895 PF08207 Elongation factor P (EF-P) KOW-like domain NHY68_01895 PF09285 Elongation factor P, C-terminal NHY68_01915 PF01197 Ribosomal protein L31 NHY68_01920 PF13593 SBF-like CPA transporter family (DUF4137) NHY68_01925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY68_01930 PF07690 Major Facilitator Superfamily NHY68_01940 PF03466 LysR substrate binding domain NHY68_01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_01950 PF01975 Survival protein SurE NHY68_01965 PF00768 D-alanyl-D-alanine carboxypeptidase NHY68_01965 PF07943 Penicillin-binding protein 5, C-terminal domain NHY68_01975 PF13344 Haloacid dehalogenase-like hydrolase NHY68_01975 PF00293 NUDIX domain NHY68_01985 PF04356 Protein of unknown function (DUF489) NHY68_01990 PF08328 Adenylosuccinate lyase C-terminal NHY68_01990 PF00206 Lyase NHY68_02015 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_02025 PF00324 Amino acid permease NHY68_02030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY68_02030 PF00205 Thiamine pyrophosphate enzyme, central domain NHY68_02030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY68_02035 PF01037 Lrp/AsnC ligand binding domain NHY68_02040 PF00171 Aldehyde dehydrogenase family NHY68_02050 PF00202 Aminotransferase class-III NHY68_02060 PF00440 Bacterial regulatory proteins, tetR family NHY68_02060 PF17754 MftR C-terminal domain NHY68_02080 PF00440 Bacterial regulatory proteins, tetR family NHY68_02090 PF18337 RapA N-terminal Tudor like domain NHY68_02090 PF12137 RNA polymerase recycling family C-terminal NHY68_02090 PF00271 Helicase conserved C-terminal domain NHY68_02090 PF00176 SNF2 family N-terminal domain NHY68_02090 PF18339 RapA N-terminal Tudor like domain 1 NHY68_02095 PF00849 RNA pseudouridylate synthase NHY68_02105 PF00202 Aminotransferase class-III NHY68_02110 PF02581 Thiamine monophosphate synthase NHY68_02135 PF05193 Peptidase M16 inactive domain NHY68_02135 PF00675 Insulinase (Peptidase family M16) NHY68_02150 PF03466 LysR substrate binding domain NHY68_02150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_02175 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY68_02180 PF00849 RNA pseudouridylate synthase NHY68_02185 PF03971 Monomeric isocitrate dehydrogenase NHY68_02195 PF00768 D-alanyl-D-alanine carboxypeptidase NHY68_02195 PF07943 Penicillin-binding protein 5, C-terminal domain NHY68_02200 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_02205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY68_02240 PF02350 UDP-N-acetylglucosamine 2-epimerase NHY68_02255 PF03060 Nitronate monooxygenase NHY68_02280 PF01018 GTP1/OBG NHY68_02280 PF01926 50S ribosome-binding GTPase NHY68_02295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NHY68_02295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NHY68_02300 PF00892 EamA-like transporter family NHY68_02310 PF00271 Helicase conserved C-terminal domain NHY68_02310 PF02151 UvrB/uvrC motif NHY68_02310 PF12344 Ultra-violet resistance protein B NHY68_02310 PF17757 UvrB interaction domain NHY68_02310 PF04851 Type III restriction enzyme, res subunit NHY68_02320 PF17151 Periplasmic sensor domain NHY68_02320 PF00990 Diguanylate cyclase, GGDEF domain NHY68_02330 PF00155 Aminotransferase class I and II NHY68_02360 PF00106 short chain dehydrogenase NHY68_02365 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NHY68_02375 PF02565 Recombination protein O C terminal NHY68_02375 PF11967 Recombination protein O N terminal NHY68_02385 PF01926 50S ribosome-binding GTPase NHY68_02385 PF07650 KH domain NHY68_02390 PF00035 Double-stranded RNA binding motif NHY68_02390 PF14622 Ribonuclease-III-like NHY68_02400 PF10502 Signal peptidase, peptidase S26 NHY68_02415 PF13180 PDZ domain NHY68_02420 PF00890 FAD binding domain NHY68_02420 PF02910 Fumarate reductase flavoprotein C-term NHY68_02430 PF02223 Thymidylate kinase NHY68_02440 PF01063 Amino-transferase class IV NHY68_02455 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_02465 PF00005 ABC transporter NHY68_02465 PF12857 TOBE-like domain NHY68_02470 PF03466 LysR substrate binding domain NHY68_02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_02480 PF14602 Hexapeptide repeat of succinyl-transferase NHY68_02480 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NHY68_02480 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_02490 PF06508 Queuosine biosynthesis protein QueC NHY68_02505 PF00578 AhpC/TSA family NHY68_02515 PF01467 Cytidylyltransferase-like NHY68_02515 PF00293 NUDIX domain NHY68_02520 PF00378 Enoyl-CoA hydratase/isomerase NHY68_02525 PF01784 NIF3 (NGG1p interacting factor 3) NHY68_02535 PF07690 Major Facilitator Superfamily NHY68_02545 PF01966 HD domain NHY68_02555 PF17864 RuvB AAA lid domain NHY68_02555 PF05491 RuvB C-terminal winged helix domain NHY68_02555 PF05496 Holliday junction DNA helicase RuvB P-loop domain NHY68_02560 PF07687 Peptidase dimerisation domain NHY68_02560 PF01546 Peptidase family M20/M25/M40 NHY68_02565 PF03061 Thioesterase superfamily NHY68_02570 PF01618 MotA/TolQ/ExbB proton channel family NHY68_02575 PF02472 Biopolymer transport protein ExbD/TolR NHY68_02585 PF04052 TolB amino-terminal domain NHY68_02585 PF07676 WD40-like Beta Propeller Repeat NHY68_02590 PF00691 OmpA family NHY68_02600 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NHY68_02605 PF00588 SpoU rRNA Methylase family NHY68_02605 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY68_02635 PF00308 Bacterial dnaA protein NHY68_02635 PF08299 Bacterial dnaA protein helix-turn-helix NHY68_02635 PF11638 DnaA N-terminal domain NHY68_02640 PF01594 AI-2E family transporter NHY68_02650 PF00551 Formyl transferase NHY68_02655 PF12697 Alpha/beta hydrolase family NHY68_02660 PF06965 Na+/H+ antiporter 1 NHY68_02660 PF01343 Peptidase family S49 NHY68_02670 PF03772 Competence protein NHY68_02670 PF13567 Domain of unknown function (DUF4131) NHY68_02670 PF00753 Metallo-beta-lactamase superfamily NHY68_02675 PF00005 ABC transporter NHY68_02690 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NHY68_02705 PF00266 Aminotransferase class-V NHY68_02715 PF13533 Biotin-lipoyl like NHY68_02735 PF00535 Glycosyl transferase family 2 NHY68_02750 PF03989 DNA gyrase C-terminal domain, beta-propeller NHY68_02750 PF00521 DNA gyrase/topoisomerase IV, subunit A NHY68_02755 PF01012 Electron transfer flavoprotein domain NHY68_02755 PF00766 Electron transfer flavoprotein FAD-binding domain NHY68_02760 PF01012 Electron transfer flavoprotein domain NHY68_02765 PF02899 Phage integrase, N-terminal SAM-like domain NHY68_02765 PF00589 Phage integrase family NHY68_02770 PF01810 LysE type translocator NHY68_02775 PF01678 Diaminopimelate epimerase NHY68_02780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NHY68_02780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NHY68_02795 PF18073 Rubredoxin metal binding domain NHY68_02805 PF00152 tRNA synthetases class II (D, K and N) NHY68_02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY68_02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY68_02810 PF11890 Domain of unknown function (DUF3410) NHY68_02815 PF06803 Protein of unknown function (DUF1232) NHY68_02820 PF02634 FdhD/NarQ family NHY68_02830 PF02595 Glycerate kinase family NHY68_02845 PF00881 Nitroreductase family NHY68_02890 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY68_02890 PF03449 Transcription elongation factor, N-terminal NHY68_02895 PF01464 Transglycosylase SLT domain NHY68_02895 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY68_02930 PF03009 Glycerophosphoryl diester phosphodiesterase family NHY68_02940 PF01219 Prokaryotic diacylglycerol kinase NHY68_02945 PF00118 TCP-1/cpn60 chaperonin family NHY68_02950 PF00166 Chaperonin 10 Kd subunit NHY68_02960 PF00149 Calcineurin-like phosphoesterase NHY68_02965 PF00781 Diacylglycerol kinase catalytic domain NHY68_02970 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NHY68_02970 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NHY68_02975 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NHY68_02975 PF01266 FAD dependent oxidoreductase NHY68_02980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NHY68_02980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NHY68_02985 PF00083 Sugar (and other) transporter NHY68_03000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NHY68_03000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NHY68_03035 PF00809 Pterin binding enzyme NHY68_03045 PF01728 FtsJ-like methyltransferase NHY68_03065 PF00117 Glutamine amidotransferase class-I NHY68_03065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NHY68_03070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NHY68_03070 PF02142 MGS-like domain NHY68_03070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY68_03075 PF01272 Transcription elongation factor, GreA/GreB, C-term NHY68_03075 PF03449 Transcription elongation factor, N-terminal NHY68_03080 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_03085 PF00582 Universal stress protein family NHY68_03090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY68_03100 PF09587 Bacterial capsule synthesis protein PGA_cap NHY68_03115 PF00999 Sodium/hydrogen exchanger family NHY68_03120 PF04228 Putative neutral zinc metallopeptidase NHY68_03125 PF05661 Protein of unknown function (DUF808) NHY68_03135 PF00549 CoA-ligase NHY68_03135 PF02629 CoA binding domain NHY68_03140 PF08442 ATP-grasp domain NHY68_03140 PF00549 CoA-ligase NHY68_03145 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_03145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY68_03150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY68_03150 PF02817 e3 binding domain NHY68_03150 PF00364 Biotin-requiring enzyme NHY68_03170 PF13085 2Fe-2S iron-sulfur cluster binding domain NHY68_03175 PF00890 FAD binding domain NHY68_03175 PF02910 Fumarate reductase flavoprotein C-term NHY68_03185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NHY68_03190 PF00285 Citrate synthase, C-terminal domain NHY68_03200 PF00581 Rhodanese-like domain NHY68_03200 PF17773 UPF0176 acylphosphatase like domain NHY68_03220 PF04546 Sigma-70, non-essential region NHY68_03220 PF04545 Sigma-70, region 4 NHY68_03220 PF03979 Sigma-70 factor, region 1.1 NHY68_03220 PF04542 Sigma-70 region 2 NHY68_03220 PF00140 Sigma-70 factor, region 1.2 NHY68_03220 PF04539 Sigma-70 region 3 NHY68_03225 PF04359 Protein of unknown function (DUF493) NHY68_03230 PF03099 Biotin/lipoate A/B protein ligase family NHY68_03240 PF00465 Iron-containing alcohol dehydrogenase NHY68_03255 PF01638 HxlR-like helix-turn-helix NHY68_03260 PF00588 SpoU rRNA Methylase family NHY68_03265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NHY68_03265 PF14824 Sirohaem biosynthesis protein central NHY68_03265 PF10414 Sirohaem synthase dimerisation region NHY68_03270 PF02403 Seryl-tRNA synthetase N-terminal domain NHY68_03270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY68_03280 PF03548 Outer membrane lipoprotein carrier protein LolA NHY68_03285 PF01016 Ribosomal L27 protein NHY68_03290 PF00829 Ribosomal prokaryotic L21 protein NHY68_03300 PF00348 Polyprenyl synthetase NHY68_03325 PF02321 Outer membrane efflux protein NHY68_03330 PF01906 Putative heavy-metal-binding NHY68_03335 PF01906 Putative heavy-metal-binding NHY68_03355 PF08264 Anticodon-binding domain of tRNA NHY68_03355 PF10458 Valyl tRNA synthetase tRNA binding arm NHY68_03355 PF00133 tRNA synthetases class I (I, L, M and V) NHY68_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_03375 PF03466 LysR substrate binding domain NHY68_03380 PF00909 Ammonium Transporter Family NHY68_03390 PF08521 Two-component sensor kinase N-terminal NHY68_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_03390 PF00512 His Kinase A (phospho-acceptor) domain NHY68_03395 PF00072 Response regulator receiver domain NHY68_03395 PF00486 Transcriptional regulatory protein, C terminal NHY68_03420 PF01734 Patatin-like phospholipase NHY68_03430 PF01145 SPFH domain / Band 7 family NHY68_03435 PF04237 YjbR NHY68_03440 PF00348 Polyprenyl synthetase NHY68_03445 PF04303 PrpF protein NHY68_03450 PF00324 Amino acid permease NHY68_03460 PF01965 DJ-1/PfpI family NHY68_03470 PF00698 Acyl transferase domain NHY68_03470 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_03470 PF08990 Erythronolide synthase docking NHY68_03470 PF09277 Erythronolide synthase, docking NHY68_03470 PF16197 Ketoacyl-synthetase C-terminal extension NHY68_03470 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY68_03470 PF00550 Phosphopantetheine attachment site NHY68_03470 PF08659 KR domain NHY68_03470 PF14765 Polyketide synthase dehydratase NHY68_03470 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY68_03475 PF12833 Helix-turn-helix domain NHY68_03475 PF06719 AraC-type transcriptional regulator N-terminus NHY68_03480 PF02673 Bacitracin resistance protein BacA NHY68_03500 PF02525 Flavodoxin-like fold NHY68_03520 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NHY68_03520 PF06974 Protein of unknown function (DUF1298) NHY68_03530 PF00575 S1 RNA binding domain NHY68_03530 PF10150 Ribonuclease E/G family NHY68_03535 PF02545 Maf-like protein NHY68_03540 PF04093 rod shape-determining protein MreD NHY68_03545 PF04085 rod shape-determining protein MreC NHY68_03555 PF02686 Glu-tRNAGln amidotransferase C subunit NHY68_03560 PF01425 Amidase NHY68_03565 PF02934 GatB/GatE catalytic domain NHY68_03565 PF02637 GatB domain NHY68_03595 PF05992 SbmA/BacA-like family NHY68_03600 PF13291 ACT domain NHY68_03600 PF00291 Pyridoxal-phosphate dependent enzyme NHY68_03605 PF01734 Patatin-like phospholipase NHY68_03625 PF00881 Nitroreductase family NHY68_03630 PF07690 Major Facilitator Superfamily NHY68_03690 PF04304 Protein of unknown function (DUF454) NHY68_03700 PF08085 Entericidin EcnA/B family NHY68_03705 PF07687 Peptidase dimerisation domain NHY68_03705 PF01546 Peptidase family M20/M25/M40 NHY68_03715 PF01584 CheW-like domain NHY68_03715 PF00072 Response regulator receiver domain NHY68_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_03715 PF01627 Hpt domain NHY68_03725 PF01584 CheW-like domain NHY68_03730 PF00072 Response regulator receiver domain NHY68_03735 PF00072 Response regulator receiver domain NHY68_03755 PF04073 Aminoacyl-tRNA editing domain NHY68_03755 PF03129 Anticodon binding domain NHY68_03755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY68_03760 PF07411 Domain of unknown function (DUF1508) NHY68_03765 PF03831 PhnA domain NHY68_03765 PF08274 PhnA Zinc-Ribbon NHY68_03780 PF01571 Aminomethyltransferase folate-binding domain NHY68_03785 PF10411 Disulfide bond isomerase protein N-terminus NHY68_03785 PF13098 Thioredoxin-like domain NHY68_03795 PF03547 Membrane transport protein NHY68_03800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY68_03820 PF02245 Methylpurine-DNA glycosylase (MPG) NHY68_03825 PF06827 Zinc finger found in FPG and IleRS NHY68_03825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NHY68_03825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NHY68_03845 PF03144 Elongation factor Tu domain 2 NHY68_03845 PF00009 Elongation factor Tu GTP binding domain NHY68_03845 PF00679 Elongation factor G C-terminus NHY68_03850 PF00860 Permease family NHY68_03855 PF05175 Methyltransferase small domain NHY68_03855 PF08468 Methyltransferase small domain N-terminal NHY68_03860 PF00324 Amino acid permease NHY68_03865 PF01139 tRNA-splicing ligase RtcB NHY68_03875 PF13505 Outer membrane protein beta-barrel domain NHY68_03875 PF00691 OmpA family NHY68_03885 PF02803 Thiolase, C-terminal domain NHY68_03885 PF00108 Thiolase, N-terminal domain NHY68_03895 PF00893 Small Multidrug Resistance protein NHY68_03905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY68_03905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY68_03910 PF01011 PQQ enzyme repeat NHY68_03915 PF04966 Carbohydrate-selective porin, OprB family NHY68_03930 PF00108 Thiolase, N-terminal domain NHY68_03930 PF02803 Thiolase, C-terminal domain NHY68_03935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY68_03935 PF00378 Enoyl-CoA hydratase/isomerase NHY68_03935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY68_03960 PF03006 Haemolysin-III related NHY68_03965 PF07690 Major Facilitator Superfamily NHY68_03965 PF00083 Sugar (and other) transporter NHY68_03975 PF02810 SEC-C motif NHY68_03975 PF07517 SecA DEAD-like domain NHY68_03975 PF01043 SecA preprotein cross-linking domain NHY68_03975 PF07516 SecA Wing and Scaffold domain NHY68_03980 PF10417 C-terminal domain of 1-Cys peroxiredoxin NHY68_03980 PF00578 AhpC/TSA family NHY68_03985 PF00753 Metallo-beta-lactamase superfamily NHY68_04000 PF08245 Mur ligase middle domain NHY68_04000 PF02875 Mur ligase family, glutamate ligase domain NHY68_04005 PF01039 Carboxyl transferase domain NHY68_04010 PF00290 Tryptophan synthase alpha chain NHY68_04040 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NHY68_04045 PF00593 TonB dependent receptor NHY68_04045 PF07715 TonB-dependent Receptor Plug Domain NHY68_04050 PF01923 Cobalamin adenosyltransferase NHY68_04070 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NHY68_04075 PF00072 Response regulator receiver domain NHY68_04075 PF00486 Transcriptional regulatory protein, C terminal NHY68_04080 PF00672 HAMP domain NHY68_04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_04080 PF00512 His Kinase A (phospho-acceptor) domain NHY68_04090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_04090 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY68_04090 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_04090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_04095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_04095 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_04095 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY68_04095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_04100 PF03466 LysR substrate binding domain NHY68_04105 PF00043 Glutathione S-transferase, C-terminal domain NHY68_04105 PF02798 Glutathione S-transferase, N-terminal domain NHY68_04110 PF06146 Phosphate-starvation-inducible E NHY68_04130 PF07715 TonB-dependent Receptor Plug Domain NHY68_04130 PF00593 TonB dependent receptor NHY68_04170 PF13439 Glycosyltransferase Family 4 NHY68_04170 PF00534 Glycosyl transferases group 1 NHY68_04175 PF00535 Glycosyl transferase family 2 NHY68_04180 PF01522 Polysaccharide deacetylase NHY68_04195 PF01063 Amino-transferase class IV NHY68_04235 PF02547 Queuosine biosynthesis protein NHY68_04250 PF01702 Queuine tRNA-ribosyltransferase NHY68_04255 PF02699 Preprotein translocase subunit NHY68_04260 PF02355 Protein export membrane protein NHY68_04260 PF13721 SecD export protein N-terminal TM region NHY68_04260 PF07549 SecD/SecF GG Motif NHY68_04265 PF02355 Protein export membrane protein NHY68_04265 PF07549 SecD/SecF GG Motif NHY68_04275 PF04002 RadC-like JAB domain NHY68_04280 PF01062 Bestrophin, RFP-TM, chloride channel NHY68_04285 PF02811 PHP domain NHY68_04295 PF03795 YCII-related domain NHY68_04315 PF04461 Protein of unknown function (DUF520) NHY68_04325 PF03061 Thioesterase superfamily NHY68_04330 PF00085 Thioredoxin NHY68_04335 PF00561 alpha/beta hydrolase fold NHY68_04340 PF04273 Putative phosphatase (DUF442) NHY68_04340 PF00753 Metallo-beta-lactamase superfamily NHY68_04350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_04350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY68_04385 PF17152 Periplasmic sensor domain NHY68_04385 PF00990 Diguanylate cyclase, GGDEF domain NHY68_04390 PF01389 OmpA-like transmembrane domain NHY68_04390 PF00691 OmpA family NHY68_04395 PF10518 TAT (twin-arginine translocation) pathway signal sequence NHY68_04395 PF00149 Calcineurin-like phosphoesterase NHY68_04400 PF13091 PLD-like domain NHY68_04410 PF16360 GTP-binding GTPase Middle Region NHY68_04410 PF01926 50S ribosome-binding GTPase NHY68_04410 PF13167 GTP-binding GTPase N-terminal NHY68_04430 PF00149 Calcineurin-like phosphoesterase NHY68_04435 PF00398 Ribosomal RNA adenine dimethylase NHY68_04440 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NHY68_04445 PF00572 Ribosomal protein L13 NHY68_04450 PF00380 Ribosomal protein S9/S16 NHY68_04455 PF13417 Glutathione S-transferase, N-terminal domain NHY68_04455 PF00043 Glutathione S-transferase, C-terminal domain NHY68_04460 PF04386 Stringent starvation protein B NHY68_04480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_04480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_04480 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_04485 PF01039 Carboxyl transferase domain NHY68_04500 PF17932 Tetracyclin repressor-like, C-terminal domain NHY68_04500 PF00440 Bacterial regulatory proteins, tetR family NHY68_04505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_04505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_04505 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_04555 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NHY68_04575 PF00056 lactate/malate dehydrogenase, NAD binding domain NHY68_04575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NHY68_04585 PF10145 Phage-related minor tail protein NHY68_04585 PF01551 Peptidase family M23 NHY68_04585 PF01464 Transglycosylase SLT domain NHY68_04590 PF00919 Uncharacterized protein family UPF0004 NHY68_04590 PF01938 TRAM domain NHY68_04590 PF04055 Radical SAM superfamily NHY68_04595 PF02562 PhoH-like protein NHY68_04600 PF02130 Uncharacterized protein family UPF0054 NHY68_04625 PF03358 NADPH-dependent FMN reductase NHY68_04630 PF03631 Virulence factor BrkB NHY68_04635 PF00892 EamA-like transporter family NHY68_04640 PF12833 Helix-turn-helix domain NHY68_04645 PF01557 Fumarylacetoacetate (FAA) hydrolase family NHY68_04690 PF08206 Ribonuclease B OB domain NHY68_04690 PF17876 Cold shock domain NHY68_04690 PF00773 RNB domain NHY68_04690 PF00575 S1 RNA binding domain NHY68_04690 PF08461 Ribonuclease R winged-helix domain NHY68_04695 PF01432 Peptidase family M3 NHY68_04700 PF09526 Probable metal-binding protein (DUF2387) NHY68_04730 PF03937 Flavinator of succinate dehydrogenase NHY68_04735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_04735 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_04735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_04740 PF00743 Flavin-binding monooxygenase-like NHY68_04745 PF01196 Ribosomal protein L17 NHY68_04750 PF01000 RNA polymerase Rpb3/RpoA insert domain NHY68_04750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NHY68_04750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NHY68_04755 PF01479 S4 domain NHY68_04755 PF00163 Ribosomal protein S4/S9 N-terminal domain NHY68_04760 PF00411 Ribosomal protein S11 NHY68_04765 PF00416 Ribosomal protein S13/S18 NHY68_04770 PF00444 Ribosomal protein L36 NHY68_04775 PF00344 SecY translocase NHY68_04780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NHY68_04785 PF00327 Ribosomal protein L30p/L7e NHY68_04790 PF00333 Ribosomal protein S5, N-terminal domain NHY68_04790 PF03719 Ribosomal protein S5, C-terminal domain NHY68_04795 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NHY68_04800 PF00347 Ribosomal protein L6 NHY68_04805 PF00410 Ribosomal protein S8 NHY68_04810 PF00253 Ribosomal protein S14p/S29e NHY68_04815 PF00281 Ribosomal protein L5 NHY68_04815 PF00673 ribosomal L5P family C-terminus NHY68_04820 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NHY68_04820 PF00467 KOW motif NHY68_04825 PF00238 Ribosomal protein L14p/L23e NHY68_04830 PF00366 Ribosomal protein S17 NHY68_04850 PF00189 Ribosomal protein S3, C-terminal domain NHY68_04850 PF07650 KH domain NHY68_04855 PF00237 Ribosomal protein L22p/L17e NHY68_04860 PF00203 Ribosomal protein S19 NHY68_04865 PF00181 Ribosomal Proteins L2, RNA binding domain NHY68_04865 PF03947 Ribosomal Proteins L2, C-terminal domain NHY68_04870 PF00276 Ribosomal protein L23 NHY68_04875 PF00573 Ribosomal protein L4/L1 family NHY68_04880 PF00297 Ribosomal protein L3 NHY68_04890 PF00117 Glutamine amidotransferase class-I NHY68_04895 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY68_04905 PF00042 Globin NHY68_04905 PF00175 Oxidoreductase NAD-binding domain NHY68_04905 PF00970 Oxidoreductase FAD-binding domain NHY68_04910 PF02082 Transcriptional regulator NHY68_04915 PF01926 50S ribosome-binding GTPase NHY68_04925 PF00375 Sodium:dicarboxylate symporter family NHY68_04935 PF01553 Acyltransferase NHY68_04955 PF00156 Phosphoribosyl transferase domain NHY68_04960 PF00293 NUDIX domain NHY68_04965 PF03641 Possible lysine decarboxylase NHY68_04970 PF01544 CorA-like Mg2+ transporter protein NHY68_04980 PF05494 MlaC protein NHY68_04990 PF02405 Permease MlaE NHY68_04995 PF00005 ABC transporter NHY68_05005 PF00270 DEAD/DEAH box helicase NHY68_05005 PF03880 DbpA RNA binding domain NHY68_05005 PF00271 Helicase conserved C-terminal domain NHY68_05005 PF12343 Cold shock protein DEAD box A NHY68_05020 PF00925 GTP cyclohydrolase II NHY68_05025 PF01218 Coproporphyrinogen III oxidase NHY68_05030 PF01488 Shikimate / quinate 5-dehydrogenase NHY68_05030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NHY68_05030 PF08501 Shikimate dehydrogenase substrate binding domain NHY68_05040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_05040 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_05040 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY68_05040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_05050 PF04024 PspC domain NHY68_05055 PF00571 CBS domain NHY68_05080 PF02091 Glycyl-tRNA synthetase alpha subunit NHY68_05085 PF05746 DALR anticodon binding domain NHY68_05085 PF02092 Glycyl-tRNA synthetase beta subunit NHY68_05095 PF00892 EamA-like transporter family NHY68_05130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NHY68_05135 PF04996 Succinylarginine dihydrolase NHY68_05140 PF00171 Aldehyde dehydrogenase family NHY68_05150 PF00202 Aminotransferase class-III NHY68_05155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY68_05155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY68_05190 PF13614 AAA domain NHY68_05195 PF01594 AI-2E family transporter NHY68_05200 PF00080 Copper/zinc superoxide dismutase (SODC) NHY68_05205 PF12805 FUSC-like inner membrane protein yccS NHY68_05225 PF03992 Antibiotic biosynthesis monooxygenase NHY68_05240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY68_05240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY68_05245 PF00892 EamA-like transporter family NHY68_05250 PF00892 EamA-like transporter family NHY68_05260 PF01925 Sulfite exporter TauE/SafE NHY68_05265 PF09157 Pseudouridine synthase II TruB, C-terminal NHY68_05265 PF16198 tRNA pseudouridylate synthase B C-terminal domain NHY68_05265 PF01509 TruB family pseudouridylate synthase (N terminal domain) NHY68_05270 PF03280 Proteobacterial lipase chaperone protein NHY68_05275 PF00561 alpha/beta hydrolase fold NHY68_05280 PF01245 Ribosomal protein L19 NHY68_05285 PF01746 tRNA (Guanine-1)-methyltransferase NHY68_05290 PF05239 PRC-barrel domain NHY68_05290 PF01782 RimM N-terminal domain NHY68_05295 PF00886 Ribosomal protein S16 NHY68_05335 PF02401 LytB protein NHY68_05340 PF00625 Guanylate kinase NHY68_05345 PF01192 RNA polymerase Rpb6 NHY68_05355 PF02824 TGS domain NHY68_05355 PF13291 ACT domain NHY68_05355 PF04607 Region found in RelA / SpoT proteins NHY68_05360 PF01042 Endoribonuclease L-PSP NHY68_05365 PF04324 BFD-like [2Fe-2S] binding domain NHY68_05370 PF00210 Ferritin-like domain NHY68_05375 PF04932 O-Antigen ligase NHY68_05375 PF11846 Virulence factor membrane-bound polymerase, C-terminal NHY68_05375 PF15864 Protein glycosylation ligase NHY68_05385 PF07963 Prokaryotic N-terminal methylation motif NHY68_05385 PF00114 Pilin (bacterial filament) NHY68_05395 PF04536 TPM domain NHY68_05400 PF04011 LemA family NHY68_05410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NHY68_05410 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_05425 PF01761 3-dehydroquinate synthase NHY68_05430 PF01202 Shikimate kinase NHY68_05435 PF00263 Bacterial type II and III secretion system protein NHY68_05435 PF11741 AMIN domain NHY68_05435 PF07660 Secretin and TonB N terminus short domain NHY68_05435 PF03958 Bacterial type II/III secretion system short domain NHY68_05445 PF04350 Pilus assembly protein, PilO NHY68_05450 PF05137 Fimbrial assembly protein (PilN) NHY68_05455 PF11104 Type IV pilus assembly protein PilM; NHY68_05460 PF17092 Penicillin-binding protein OB-like domain NHY68_05460 PF00912 Transglycosylase NHY68_05460 PF00905 Penicillin binding protein transpeptidase domain NHY68_05465 PF13847 Methyltransferase domain NHY68_05475 PF00953 Glycosyl transferase family 4 NHY68_05480 PF01225 Mur ligase family, catalytic domain NHY68_05480 PF02875 Mur ligase family, glutamate ligase domain NHY68_05480 PF08245 Mur ligase middle domain NHY68_05490 PF00905 Penicillin binding protein transpeptidase domain NHY68_05490 PF03717 Penicillin-binding Protein dimerisation domain NHY68_05500 PF01795 MraW methylase family NHY68_05515 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY68_05530 PF00324 Amino acid permease NHY68_05560 PF01545 Cation efflux family NHY68_05565 PF00873 AcrB/AcrD/AcrF family NHY68_05570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY68_05570 PF00529 HlyD membrane-fusion protein of T1SS NHY68_05590 PF04191 Phospholipid methyltransferase NHY68_05620 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY68_05625 PF00106 short chain dehydrogenase NHY68_05630 PF00916 Sulfate permease family NHY68_05630 PF01740 STAS domain NHY68_05640 PF00072 Response regulator receiver domain NHY68_05640 PF00486 Transcriptional regulatory protein, C terminal NHY68_05660 PF00583 Acetyltransferase (GNAT) family NHY68_05700 PF00977 Histidine biosynthesis protein NHY68_05715 PF03992 Antibiotic biosynthesis monooxygenase NHY68_05730 PF01636 Phosphotransferase enzyme family NHY68_05735 PF00977 Histidine biosynthesis protein NHY68_05750 PF00230 Major intrinsic protein NHY68_05775 PF02705 K+ potassium transporter NHY68_05780 PF02705 K+ potassium transporter NHY68_05800 PF02525 Flavodoxin-like fold NHY68_05805 PF01638 HxlR-like helix-turn-helix NHY68_05840 PF00248 Aldo/keto reductase family NHY68_05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_05860 PF03466 LysR substrate binding domain NHY68_05865 PF07690 Major Facilitator Superfamily NHY68_05885 PF01593 Flavin containing amine oxidoreductase NHY68_05890 PF05726 Pirin C-terminal cupin domain NHY68_05890 PF02678 Pirin NHY68_05895 PF00857 Isochorismatase family NHY68_05900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_05905 PF00171 Aldehyde dehydrogenase family NHY68_05910 PF00202 Aminotransferase class-III NHY68_05915 PF00155 Aminotransferase class I and II NHY68_05915 PF00392 Bacterial regulatory proteins, gntR family NHY68_05920 PF00324 Amino acid permease NHY68_05945 PF07690 Major Facilitator Superfamily NHY68_05960 PF06942 GlpM protein NHY68_05970 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_05970 PF00107 Zinc-binding dehydrogenase NHY68_05975 PF16925 Tetracyclin repressor-like, C-terminal domain NHY68_05975 PF00440 Bacterial regulatory proteins, tetR family NHY68_05980 PF17760 UvrA interaction domain NHY68_05980 PF17755 UvrA DNA-binding domain NHY68_05980 PF00005 ABC transporter NHY68_05990 PF00990 Diguanylate cyclase, GGDEF domain NHY68_06010 PF00474 Sodium:solute symporter family NHY68_06015 PF04341 Protein of unknown function, DUF485 NHY68_06030 PF00196 Bacterial regulatory proteins, luxR family NHY68_06030 PF00072 Response regulator receiver domain NHY68_06035 PF03358 NADPH-dependent FMN reductase NHY68_06040 PF00296 Luciferase-like monooxygenase NHY68_06050 PF01037 Lrp/AsnC ligand binding domain NHY68_06055 PF00857 Isochorismatase family NHY68_06060 PF16177 Acetyl-coenzyme A synthetase N-terminus NHY68_06060 PF00501 AMP-binding enzyme NHY68_06060 PF13193 AMP-binding enzyme C-terminal domain NHY68_06070 PF00924 Mechanosensitive ion channel NHY68_06075 PF04452 RNA methyltransferase NHY68_06080 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NHY68_06085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NHY68_06105 PF01368 DHH family NHY68_06105 PF02272 DHHA1 domain NHY68_06105 PF17768 RecJ OB domain NHY68_06110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NHY68_06110 PF01243 Pyridoxamine 5'-phosphate oxidase NHY68_06115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY68_06115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY68_06115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY68_06115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY68_06120 PF00571 CBS domain NHY68_06120 PF00478 IMP dehydrogenase / GMP reductase domain NHY68_06125 PF03692 Putative zinc- or iron-chelating domain NHY68_06130 PF01613 Flavin reductase like domain NHY68_06130 PF00258 Flavodoxin NHY68_06150 PF01169 Uncharacterized protein family UPF0016 NHY68_06160 PF00364 Biotin-requiring enzyme NHY68_06160 PF02817 e3 binding domain NHY68_06160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY68_06165 PF17831 Pyruvate dehydrogenase E1 component middle domain NHY68_06165 PF00456 Transketolase, thiamine diphosphate binding domain NHY68_06170 PF01551 Peptidase family M23 NHY68_06180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NHY68_06185 PF12327 FtsZ family, C-terminal domain NHY68_06185 PF00091 Tubulin/FtsZ family, GTPase domain NHY68_06190 PF02491 SHS2 domain inserted in FTSA NHY68_06195 PF08478 POTRA domain, FtsQ-type NHY68_06195 PF03799 Cell division protein FtsQ NHY68_06210 PF04101 Glycosyltransferase family 28 C-terminal domain NHY68_06210 PF03033 Glycosyltransferase family 28 N-terminal domain NHY68_06215 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NHY68_06215 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NHY68_06225 PF00593 TonB dependent receptor NHY68_06225 PF07715 TonB-dependent Receptor Plug Domain NHY68_06230 PF00156 Phosphoribosyl transferase domain NHY68_06235 PF03372 Endonuclease/Exonuclease/phosphatase family NHY68_06240 PF03960 ArsC family NHY68_06260 PF02683 Cytochrome C biogenesis protein transmembrane region NHY68_06260 PF11412 Disulphide bond corrector protein DsbC NHY68_06290 PF00576 HIUase/Transthyretin family NHY68_06295 PF00860 Permease family NHY68_06305 PF01494 FAD binding domain NHY68_06310 PF03561 Allantoicase repeat NHY68_06315 PF04115 Ureidoglycolate lyase NHY68_06320 PF00106 short chain dehydrogenase NHY68_06325 PF01751 Toprim domain NHY68_06325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_06325 PF00204 DNA gyrase B NHY68_06325 PF00986 DNA gyrase B subunit, carboxyl terminus NHY68_06330 PF05728 Uncharacterised protein family (UPF0227) NHY68_06350 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NHY68_06350 PF04717 Type VI secretion system, phage-baseplate injector NHY68_06350 PF13296 Putative type VI secretion system Rhs element Vgr NHY68_06355 PF02600 Disulfide bond formation protein DsbB NHY68_06360 PF04262 Glutamate-cysteine ligase NHY68_06375 PF04286 Protein of unknown function (DUF445) NHY68_06380 PF00155 Aminotransferase class I and II NHY68_06390 PF00106 short chain dehydrogenase NHY68_06400 PF00072 Response regulator receiver domain NHY68_06400 PF00486 Transcriptional regulatory protein, C terminal NHY68_06405 PF11808 Phosphate regulon sensor protein PhoR NHY68_06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_06405 PF00512 His Kinase A (phospho-acceptor) domain NHY68_06405 PF00989 PAS fold NHY68_06425 PF03069 Acetamidase/Formamidase family NHY68_06430 PF02666 Phosphatidylserine decarboxylase NHY68_06435 PF00581 Rhodanese-like domain NHY68_06440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY68_06440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NHY68_06445 PF02580 D-Tyr-tRNA(Tyr) deacylase NHY68_06470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY68_06470 PF00925 GTP cyclohydrolase II NHY68_06475 PF00885 6,7-dimethyl-8-ribityllumazine synthase NHY68_06480 PF01029 NusB family NHY68_06485 PF00586 AIR synthase related protein, N-terminal domain NHY68_06485 PF02769 AIR synthase related protein, C-terminal domain NHY68_06490 PF04608 Phosphatidylglycerophosphatase A NHY68_06495 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_06495 PF14602 Hexapeptide repeat of succinyl-transferase NHY68_06495 PF12804 MobA-like NTP transferase domain NHY68_06500 PF01380 SIS domain NHY68_06505 PF01177 Asp/Glu/Hydantoin racemase NHY68_06520 PF00491 Arginase family NHY68_06525 PF01979 Amidohydrolase family NHY68_06540 PF17391 Urocanase N-terminal domain NHY68_06540 PF17392 Urocanase C-terminal domain NHY68_06540 PF01175 Urocanase Rossmann-like domain NHY68_06545 PF05962 HutD NHY68_06550 PF00392 Bacterial regulatory proteins, gntR family NHY68_06550 PF07702 UTRA domain NHY68_06560 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY68_06560 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY68_06580 PF02798 Glutathione S-transferase, N-terminal domain NHY68_06580 PF14497 Glutathione S-transferase, C-terminal domain NHY68_06585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY68_06600 PF04463 Protein of unknown function (DUF523) NHY68_06605 PF01554 MatE NHY68_06610 PF01758 Sodium Bile acid symporter family NHY68_06615 PF00857 Isochorismatase family NHY68_06620 PF00701 Dihydrodipicolinate synthetase family NHY68_06630 PF01259 SAICAR synthetase NHY68_06640 PF01226 Formate/nitrite transporter NHY68_06650 PF07995 Glucose / Sorbosone dehydrogenase NHY68_06660 PF07043 Protein of unknown function (DUF1328) NHY68_06675 PF10576 Iron-sulfur binding domain of endonuclease III NHY68_06675 PF00633 Helix-hairpin-helix motif NHY68_06675 PF14815 NUDIX domain NHY68_06675 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY68_06690 PF03352 Methyladenine glycosylase NHY68_06695 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_06695 PF00107 Zinc-binding dehydrogenase NHY68_06715 PF03466 LysR substrate binding domain NHY68_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_06725 PF07690 Major Facilitator Superfamily NHY68_06735 PF01113 Dihydrodipicolinate reductase, N-terminus NHY68_06735 PF05173 Dihydrodipicolinate reductase, C-terminus NHY68_06745 PF00226 DnaJ domain NHY68_06745 PF01556 DnaJ C terminal domain NHY68_06745 PF00684 DnaJ central domain NHY68_06755 PF00873 AcrB/AcrD/AcrF family NHY68_06765 PF08361 MAATS-type transcriptional repressor, C-terminal region NHY68_06765 PF00440 Bacterial regulatory proteins, tetR family NHY68_06775 PF00860 Permease family NHY68_06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_06780 PF03466 LysR substrate binding domain NHY68_06795 PF00920 Dehydratase family NHY68_06800 PF02911 Formyl transferase, C-terminal domain NHY68_06800 PF00551 Formyl transferase NHY68_06815 PF00209 Sodium:neurotransmitter symporter family NHY68_06855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY68_06860 PF07859 alpha/beta hydrolase fold NHY68_06880 PF03466 LysR substrate binding domain NHY68_06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_06885 PF01025 GrpE NHY68_06890 PF00012 Hsp70 protein NHY68_06910 PF13406 Transglycosylase SLT domain NHY68_06915 PF02222 ATP-grasp domain NHY68_06915 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NHY68_06920 PF00731 AIR carboxylase NHY68_06930 PF08245 Mur ligase middle domain NHY68_06930 PF01225 Mur ligase family, catalytic domain NHY68_06930 PF02875 Mur ligase family, glutamate ligase domain NHY68_06940 PF01569 PAP2 superfamily NHY68_06945 PF03741 Integral membrane protein TerC family NHY68_06960 PF00355 Rieske [2Fe-2S] domain NHY68_06970 PF00156 Phosphoribosyl transferase domain NHY68_06980 PF10411 Disulfide bond isomerase protein N-terminus NHY68_06980 PF13098 Thioredoxin-like domain NHY68_06985 PF16916 Dimerisation domain of Zinc Transporter NHY68_06985 PF01545 Cation efflux family NHY68_06990 PF02583 Metal-sensitive transcriptional repressor NHY68_06995 PF01926 50S ribosome-binding GTPase NHY68_06995 PF12631 MnmE helical domain NHY68_06995 PF10396 GTP-binding protein TrmE N-terminus NHY68_07000 PF14849 YidC periplasmic domain NHY68_07000 PF02096 60Kd inner membrane protein NHY68_07005 PF01809 Putative membrane protein insertion efficiency factor NHY68_07010 PF00825 Ribonuclease P NHY68_07015 PF00468 Ribosomal protein L34 NHY68_07020 PF11638 DnaA N-terminal domain NHY68_07020 PF00308 Bacterial dnaA protein NHY68_07020 PF08299 Bacterial dnaA protein helix-turn-helix NHY68_07030 PF02463 RecF/RecN/SMC N terminal domain NHY68_07045 PF09335 SNARE associated Golgi protein NHY68_07050 PF12848 ABC transporter NHY68_07050 PF00005 ABC transporter NHY68_07070 PF01521 Iron-sulphur cluster biosynthesis NHY68_07075 PF00561 alpha/beta hydrolase fold NHY68_07080 PF03702 Anhydro-N-acetylmuramic acid kinase NHY68_07085 PF00579 tRNA synthetases class I (W and Y) NHY68_07125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY68_07130 PF01252 Signal peptidase (SPase) II NHY68_07135 PF08264 Anticodon-binding domain of tRNA NHY68_07135 PF06827 Zinc finger found in FPG and IleRS NHY68_07135 PF00133 tRNA synthetases class I (I, L, M and V) NHY68_07140 PF01687 Riboflavin kinase NHY68_07140 PF06574 FAD synthetase NHY68_07150 PF01048 Phosphorylase superfamily NHY68_07155 PF00440 Bacterial regulatory proteins, tetR family NHY68_07155 PF08362 YcdC-like protein, C-terminal region NHY68_07160 PF00005 ABC transporter NHY68_07165 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_07170 PF00296 Luciferase-like monooxygenase NHY68_07175 PF09084 NMT1/THI5 like NHY68_07185 PF00696 Amino acid kinase family NHY68_07185 PF00583 Acetyltransferase (GNAT) family NHY68_07200 PF00106 short chain dehydrogenase NHY68_07205 PF13419 Haloacid dehalogenase-like hydrolase NHY68_07215 PF01323 DSBA-like thioredoxin domain NHY68_07220 PF00440 Bacterial regulatory proteins, tetR family NHY68_07220 PF08360 QacR-like protein, C-terminal region NHY68_07225 PF00440 Bacterial regulatory proteins, tetR family NHY68_07230 PF00175 Oxidoreductase NAD-binding domain NHY68_07240 PF03725 3' exoribonuclease family, domain 2 NHY68_07240 PF01138 3' exoribonuclease family, domain 1 NHY68_07265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NHY68_07265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NHY68_07270 PF01510 N-acetylmuramoyl-L-alanine amidase NHY68_07275 PF03023 Lipid II flippase MurJ NHY68_07280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY68_07280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY68_07285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY68_07285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NHY68_07290 PF13614 AAA domain NHY68_07290 PF13807 G-rich domain on putative tyrosine kinase NHY68_07290 PF02706 Chain length determinant protein NHY68_07295 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY68_07300 PF02563 Polysaccharide biosynthesis/export protein NHY68_07300 PF10531 SLBB domain NHY68_07300 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NHY68_07305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY68_07305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY68_07305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY68_07315 PF00535 Glycosyl transferase family 2 NHY68_07320 PF13439 Glycosyltransferase Family 4 NHY68_07320 PF00534 Glycosyl transferases group 1 NHY68_07330 PF13439 Glycosyltransferase Family 4 NHY68_07330 PF00534 Glycosyl transferases group 1 NHY68_07335 PF13477 Glycosyl transferase 4-like NHY68_07335 PF00534 Glycosyl transferases group 1 NHY68_07340 PF02397 Bacterial sugar transferase NHY68_07345 PF00483 Nucleotidyl transferase NHY68_07350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NHY68_07350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NHY68_07350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NHY68_07355 PF00342 Phosphoglucose isomerase NHY68_07360 PF16363 GDP-mannose 4,6 dehydratase NHY68_07370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY68_07370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY68_07370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY68_07370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY68_07380 PF07729 FCD domain NHY68_07380 PF00392 Bacterial regulatory proteins, gntR family NHY68_07385 PF01070 FMN-dependent dehydrogenase NHY68_07395 PF00155 Aminotransferase class I and II NHY68_07405 PF07729 FCD domain NHY68_07405 PF00392 Bacterial regulatory proteins, gntR family NHY68_07435 PF13737 Transposase DDE domain NHY68_07445 PF13737 Transposase DDE domain NHY68_07470 PF00106 short chain dehydrogenase NHY68_07480 PF00849 RNA pseudouridylate synthase NHY68_07495 PF00593 TonB dependent receptor NHY68_07495 PF07715 TonB-dependent Receptor Plug Domain NHY68_07505 PF01037 Lrp/AsnC ligand binding domain NHY68_07510 PF01266 FAD dependent oxidoreductase NHY68_07515 PF01168 Alanine racemase, N-terminal domain NHY68_07515 PF00842 Alanine racemase, C-terminal domain NHY68_07520 PF01042 Endoribonuclease L-PSP NHY68_07525 PF13737 Transposase DDE domain NHY68_07530 PF00324 Amino acid permease NHY68_07535 PF00324 Amino acid permease NHY68_07545 PF00171 Aldehyde dehydrogenase family NHY68_07550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY68_07550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY68_07560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_07560 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_07560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_07570 PF00378 Enoyl-CoA hydratase/isomerase NHY68_07575 PF07690 Major Facilitator Superfamily NHY68_07575 PF00083 Sugar (and other) transporter NHY68_07580 PF00765 Autoinducer synthase NHY68_07590 PF03472 Autoinducer binding domain NHY68_07590 PF00196 Bacterial regulatory proteins, luxR family NHY68_07595 PF00501 AMP-binding enzyme NHY68_07600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_07600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_07600 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_07605 PF00550 Phosphopantetheine attachment site NHY68_07605 PF14765 Polyketide synthase dehydratase NHY68_07605 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY68_07605 PF08242 Methyltransferase domain NHY68_07605 PF00975 Thioesterase domain NHY68_07605 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY68_07605 PF16197 Ketoacyl-synthetase C-terminal extension NHY68_07630 PF01648 4'-phosphopantetheinyl transferase superfamily NHY68_07645 PF01722 BolA-like protein NHY68_07670 PF09335 SNARE associated Golgi protein NHY68_07675 PF07681 DoxX NHY68_07685 PF00117 Glutamine amidotransferase class-I NHY68_07685 PF00958 GMP synthase C terminal domain NHY68_07685 PF02540 NAD synthase NHY68_07690 PF01909 Nucleotidyltransferase domain NHY68_07690 PF13427 Domain of unknown function (DUF4111) NHY68_07705 PF02678 Pirin NHY68_07705 PF05726 Pirin C-terminal cupin domain NHY68_07725 PF03485 Arginyl tRNA synthetase N terminal domain NHY68_07725 PF05746 DALR anticodon binding domain NHY68_07725 PF00750 tRNA synthetases class I (R) NHY68_07740 PF04261 Dyp-type peroxidase family NHY68_07745 PF01810 LysE type translocator NHY68_07750 PF00950 ABC 3 transport family NHY68_07755 PF00005 ABC transporter NHY68_07775 PF00119 ATP synthase A chain NHY68_07780 PF00137 ATP synthase subunit C NHY68_07785 PF00430 ATP synthase B/B' CF(0) NHY68_07790 PF00213 ATP synthase delta (OSCP) subunit NHY68_07795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY68_07795 PF00306 ATP synthase alpha/beta chain, C terminal domain NHY68_07795 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY68_07805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY68_07805 PF02874 ATP synthase alpha/beta family, beta-barrel domain NHY68_07810 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NHY68_07820 PF00255 Glutathione peroxidase NHY68_07835 PF00440 Bacterial regulatory proteins, tetR family NHY68_07840 PF00892 EamA-like transporter family NHY68_07845 PF01300 Telomere recombination NHY68_07850 PF02481 DNA recombination-mediator protein A NHY68_07850 PF17782 DprA winged helix domain NHY68_07860 PF01327 Polypeptide deformylase NHY68_07920 PF00291 Pyridoxal-phosphate dependent enzyme NHY68_07930 PF03358 NADPH-dependent FMN reductase NHY68_07970 PF00817 impB/mucB/samB family NHY68_07970 PF11799 impB/mucB/samB family C-terminal domain NHY68_07970 PF11798 IMS family HHH motif NHY68_07980 PF07690 Major Facilitator Superfamily NHY68_07985 PF03641 Possible lysine decarboxylase NHY68_07990 PF03741 Integral membrane protein TerC family NHY68_07990 PF03471 Transporter associated domain NHY68_07995 PF02810 SEC-C motif NHY68_08000 PF03458 UPF0126 domain NHY68_08005 PF07690 Major Facilitator Superfamily NHY68_08010 PF03989 DNA gyrase C-terminal domain, beta-propeller NHY68_08010 PF00521 DNA gyrase/topoisomerase IV, subunit A NHY68_08015 PF00501 AMP-binding enzyme NHY68_08015 PF13193 AMP-binding enzyme C-terminal domain NHY68_08030 PF00719 Inorganic pyrophosphatase NHY68_08035 PF03573 outer membrane porin, OprD family NHY68_08050 PF00701 Dihydrodipicolinate synthetase family NHY68_08060 PF00155 Aminotransferase class I and II NHY68_08060 PF00392 Bacterial regulatory proteins, gntR family NHY68_08095 PF00582 Universal stress protein family NHY68_08100 PF01740 STAS domain NHY68_08100 PF00916 Sulfate permease family NHY68_08110 PF00905 Penicillin binding protein transpeptidase domain NHY68_08160 PF02899 Phage integrase, N-terminal SAM-like domain NHY68_08160 PF00589 Phage integrase family NHY68_08185 PF00665 Integrase core domain NHY68_08200 PF00809 Pterin binding enzyme NHY68_08205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY68_08205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY68_08205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY68_08205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY68_08245 PF00582 Universal stress protein family NHY68_08250 PF01740 STAS domain NHY68_08250 PF00916 Sulfate permease family NHY68_08295 PF02909 Tetracyclin repressor-like, C-terminal domain NHY68_08295 PF00440 Bacterial regulatory proteins, tetR family NHY68_08315 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NHY68_08320 PF01636 Phosphotransferase enzyme family NHY68_08340 PF00543 Nitrogen regulatory protein P-II NHY68_08345 PF00909 Ammonium Transporter Family NHY68_08350 PF03477 ATP cone domain NHY68_08355 PF01872 RibD C-terminal domain NHY68_08355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY68_08370 PF00677 Lumazine binding domain NHY68_08390 PF00883 Cytosol aminopeptidase family, catalytic domain NHY68_08390 PF02789 Cytosol aminopeptidase family, N-terminal domain NHY68_08410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NHY68_08410 PF01676 Metalloenzyme superfamily NHY68_08415 PF00595 PDZ domain NHY68_08415 PF03572 Peptidase family S41 NHY68_08420 PF02954 Bacterial regulatory protein, Fis family NHY68_08420 PF00072 Response regulator receiver domain NHY68_08420 PF00158 Sigma-54 interaction domain NHY68_08430 PF00196 Bacterial regulatory proteins, luxR family NHY68_08430 PF00072 Response regulator receiver domain NHY68_08435 PF00768 D-alanyl-D-alanine carboxypeptidase NHY68_08445 PF01842 ACT domain NHY68_08445 PF00742 Homoserine dehydrogenase NHY68_08445 PF03447 Homoserine dehydrogenase, NAD binding domain NHY68_08455 PF02899 Phage integrase, N-terminal SAM-like domain NHY68_08455 PF00589 Phage integrase family NHY68_08475 PF02875 Mur ligase family, glutamate ligase domain NHY68_08475 PF08245 Mur ligase middle domain NHY68_08480 PF01098 Cell cycle protein NHY68_08485 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY68_08490 PF01258 Prokaryotic dksA/traR C4-type zinc finger NHY68_08495 PF00149 Calcineurin-like phosphoesterase NHY68_08500 PF00293 NUDIX domain NHY68_08520 PF00892 EamA-like transporter family NHY68_08525 PF02321 Outer membrane efflux protein NHY68_08530 PF01895 PhoU domain NHY68_08535 PF04362 Bacterial Fe(2+) trafficking NHY68_08545 PF06580 Histidine kinase NHY68_08545 PF07694 5TMR of 5TMR-LYT NHY68_08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_08550 PF00072 Response regulator receiver domain NHY68_08550 PF04397 LytTr DNA-binding domain NHY68_08555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NHY68_08555 PF03900 Porphobilinogen deaminase, C-terminal domain NHY68_08580 PF00816 H-NS histone family NHY68_08595 PF00263 Bacterial type II and III secretion system protein NHY68_08595 PF03958 Bacterial type II/III secretion system short domain NHY68_08600 PF12401 Protein of unknown function (DUF2662) NHY68_08600 PF00498 FHA domain NHY68_08605 PF13419 Haloacid dehalogenase-like hydrolase NHY68_08610 PF04715 Anthranilate synthase component I, N terminal region NHY68_08610 PF00425 chorismate binding enzyme NHY68_08635 PF00009 Elongation factor Tu GTP binding domain NHY68_08635 PF03144 Elongation factor Tu domain 2 NHY68_08635 PF03143 Elongation factor Tu C-terminal domain NHY68_08645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NHY68_08650 PF02357 Transcription termination factor nusG NHY68_08650 PF00467 KOW motif NHY68_08655 PF00298 Ribosomal protein L11, RNA binding domain NHY68_08655 PF03946 Ribosomal protein L11, N-terminal domain NHY68_08660 PF00687 Ribosomal protein L1p/L10e family NHY68_08670 PF00542 Ribosomal protein L7/L12 C-terminal domain NHY68_08670 PF16320 Ribosomal protein L7/L12 dimerisation domain NHY68_08700 PF00561 alpha/beta hydrolase fold NHY68_08705 PF13726 Na+-H+ antiporter family NHY68_08705 PF03553 Na+/H+ antiporter family NHY68_08735 PF01323 DSBA-like thioredoxin domain NHY68_08745 PF09278 MerR, DNA binding NHY68_08745 PF00376 MerR family regulatory protein NHY68_08765 PF02803 Thiolase, C-terminal domain NHY68_08765 PF00108 Thiolase, N-terminal domain NHY68_08770 PF00378 Enoyl-CoA hydratase/isomerase NHY68_08770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY68_08770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY68_08790 PF01541 GIY-YIG catalytic domain NHY68_08790 PF08459 UvrC Helix-hairpin-helix N-terminal NHY68_08790 PF02151 UvrB/uvrC motif NHY68_08800 PF01066 CDP-alcohol phosphatidyltransferase NHY68_08805 PF02805 Metal binding domain of Ada NHY68_08805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY68_08805 PF12833 Helix-turn-helix domain NHY68_08805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY68_08830 PF13533 Biotin-lipoyl like NHY68_08835 PF03652 Holliday junction resolvase NHY68_08840 PF02622 Uncharacterized ACR, COG1678 NHY68_08855 PF06865 Pyrimidine/purine nucleoside phosphorylase NHY68_08860 PF08032 RNA 2'-O ribose methyltransferase substrate binding NHY68_08860 PF00588 SpoU rRNA Methylase family NHY68_08870 PF01121 Dephospho-CoA kinase NHY68_08875 PF06750 Bacterial Peptidase A24 N-terminal domain NHY68_08875 PF01478 Type IV leader peptidase family NHY68_08885 PF00482 Type II secretion system (T2SS), protein F NHY68_08895 PF00121 Triosephosphate isomerase NHY68_08900 PF03840 Preprotein translocase SecG subunit NHY68_08920 PF17384 RimP C-terminal SH3 domain NHY68_08920 PF02576 RimP N-terminal domain NHY68_08930 PF00009 Elongation factor Tu GTP binding domain NHY68_08930 PF04760 Translation initiation factor IF-2, N-terminal region NHY68_08930 PF11987 Translation-initiation factor 2 NHY68_08930 PF08364 Bacterial translation initiation factor IF-2 associated region NHY68_08935 PF02033 Ribosome-binding factor A NHY68_08940 PF03334 Na+/H+ antiporter subunit NHY68_08945 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NHY68_08950 PF01899 Na+/H+ ion antiporter subunit NHY68_08960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY68_08980 PF01502 Phosphoribosyl-AMP cyclohydrolase NHY68_08985 PF01494 FAD binding domain NHY68_08990 PF03109 ABC1 family NHY68_09000 PF01209 ubiE/COQ5 methyltransferase family NHY68_09010 PF03976 Polyphosphate kinase 2 (PPK2) NHY68_09025 PF13361 UvrD-like helicase C-terminal domain NHY68_09025 PF12705 PD-(D/E)XK nuclease superfamily NHY68_09025 PF00580 UvrD/REP helicase N-terminal domain NHY68_09030 PF13538 UvrD-like helicase C-terminal domain NHY68_09035 PF00144 Beta-lactamase NHY68_09040 PF00312 Ribosomal protein S15 NHY68_09045 PF03725 3' exoribonuclease family, domain 2 NHY68_09045 PF00013 KH domain NHY68_09045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NHY68_09045 PF00575 S1 RNA binding domain NHY68_09045 PF01138 3' exoribonuclease family, domain 1 NHY68_09050 PF01544 CorA-like Mg2+ transporter protein NHY68_09060 PF00226 DnaJ domain NHY68_09060 PF01556 DnaJ C terminal domain NHY68_09070 PF01430 Hsp33 protein NHY68_09080 PF18074 Primosomal protein N C-terminal domain NHY68_09080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NHY68_09080 PF17764 3′ DNA-binding domain (3′BD) NHY68_09080 PF00271 Helicase conserved C-terminal domain NHY68_09080 PF00270 DEAD/DEAH box helicase NHY68_09090 PF08334 Type II secretion system (T2SS), protein G NHY68_09090 PF07963 Prokaryotic N-terminal methylation motif NHY68_09100 PF13737 Transposase DDE domain NHY68_09105 PF01588 Putative tRNA binding domain NHY68_09110 PF00795 Carbon-nitrogen hydrolase NHY68_09115 PF00571 CBS domain NHY68_09115 PF03471 Transporter associated domain NHY68_09120 PF01206 Sulfurtransferase TusA NHY68_09135 PF01177 Asp/Glu/Hydantoin racemase NHY68_09145 PF00762 Ferrochelatase NHY68_09150 PF00753 Metallo-beta-lactamase superfamily NHY68_09155 PF03884 DNA gyrase inhibitor YacG NHY68_09175 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NHY68_09190 PF01197 Ribosomal protein L31 NHY68_09195 PF03109 ABC1 family NHY68_09200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_09200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY68_09205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY68_09205 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_09205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_09210 PF01554 MatE NHY68_09220 PF06969 HemN C-terminal domain NHY68_09220 PF04055 Radical SAM superfamily NHY68_09225 PF00106 short chain dehydrogenase NHY68_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_09230 PF03466 LysR substrate binding domain NHY68_09245 PF13193 AMP-binding enzyme C-terminal domain NHY68_09245 PF00501 AMP-binding enzyme NHY68_09250 PF12111 Polyribonucleotide phosphorylase C terminal NHY68_09250 PF10150 Ribonuclease E/G family NHY68_09250 PF00575 S1 RNA binding domain NHY68_09255 PF00849 RNA pseudouridylate synthase NHY68_09255 PF01479 S4 domain NHY68_09260 PF13419 Haloacid dehalogenase-like hydrolase NHY68_09265 PF13280 WYL domain NHY68_09265 PF08279 HTH domain NHY68_09270 PF02798 Glutathione S-transferase, N-terminal domain NHY68_09280 PF03466 LysR substrate binding domain NHY68_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_09285 PF12706 Beta-lactamase superfamily domain NHY68_09290 PF00141 Peroxidase NHY68_09295 PF02896 PEP-utilising enzyme, TIM barrel domain NHY68_09295 PF00391 PEP-utilising enzyme, mobile domain NHY68_09295 PF05524 PEP-utilising enzyme, N-terminal NHY68_09295 PF01590 GAF domain NHY68_09320 PF03466 LysR substrate binding domain NHY68_09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_09330 PF00330 Aconitase family (aconitate hydratase) NHY68_09345 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY68_09360 PF01176 Translation initiation factor 1A / IF-1 NHY68_09370 PF01416 tRNA pseudouridine synthase NHY68_09400 PF00375 Sodium:dicarboxylate symporter family NHY68_09410 PF03279 Bacterial lipid A biosynthesis acyltransferase NHY68_09415 PF01810 LysE type translocator NHY68_09420 PF00005 ABC transporter NHY68_09420 PF12848 ABC transporter NHY68_09420 PF16326 ABC transporter C-terminal domain NHY68_09425 PF04102 SlyX NHY68_09430 PF00107 Zinc-binding dehydrogenase NHY68_09430 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_09435 PF01638 HxlR-like helix-turn-helix NHY68_09445 PF01751 Toprim domain NHY68_09445 PF08272 Topoisomerase I zinc-ribbon-like NHY68_09445 PF01396 Topoisomerase DNA binding C4 zinc finger NHY68_09445 PF01131 DNA topoisomerase NHY68_09465 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NHY68_09485 PF02254 TrkA-N domain NHY68_09485 PF00999 Sodium/hydrogen exchanger family NHY68_09490 PF00471 Ribosomal protein L33 NHY68_09495 PF00830 Ribosomal L28 family NHY68_09500 PF00171 Aldehyde dehydrogenase family NHY68_09510 PF01842 ACT domain NHY68_09510 PF00551 Formyl transferase NHY68_09520 PF01618 MotA/TolQ/ExbB proton channel family NHY68_09530 PF01625 Peptide methionine sulfoxide reductase NHY68_09540 PF00186 Dihydrofolate reductase NHY68_09545 PF00303 Thymidylate synthase NHY68_09560 PF01790 Prolipoprotein diacylglyceryl transferase NHY68_09580 PF00902 Sec-independent protein translocase protein (TatC) NHY68_09585 PF02416 mttA/Hcf106 family NHY68_09590 PF02416 mttA/Hcf106 family NHY68_09600 PF01725 Ham1 family NHY68_09610 PF00561 alpha/beta hydrolase fold NHY68_09610 PF07021 Methionine biosynthesis protein MetW NHY68_09620 PF00682 HMGL-like NHY68_09620 PF08502 LeuA allosteric (dimerisation) domain NHY68_09625 PF13640 2OG-Fe(II) oxygenase superfamily NHY68_09625 PF18331 PKHD-type hydroxylase C-terminal domain NHY68_09635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY68_09635 PF05698 Bacterial trigger factor protein (TF) C-terminus NHY68_09635 PF05697 Bacterial trigger factor protein (TF) NHY68_09640 PF00574 Clp protease NHY68_09645 PF07724 AAA domain (Cdc48 subfamily) NHY68_09645 PF10431 C-terminal, D2-small domain, of ClpB protein NHY68_09645 PF06689 ClpX C4-type zinc finger NHY68_09660 PF05681 Fumarate hydratase (Fumerase) NHY68_09660 PF05683 Fumarase C-terminus NHY68_09665 PF07085 DRTGG domain NHY68_09665 PF01515 Phosphate acetyl/butaryl transferase NHY68_09675 PF00920 Dehydratase family NHY68_09680 PF01081 KDPG and KHG aldolase NHY68_09695 PF01202 Shikimate kinase NHY68_09700 PF00171 Aldehyde dehydrogenase family NHY68_09705 PF00171 Aldehyde dehydrogenase family NHY68_09710 PF00561 alpha/beta hydrolase fold NHY68_09720 PF00933 Glycosyl hydrolase family 3 N terminal domain NHY68_09725 PF17804 Tail specific protease N-terminal domain NHY68_09725 PF00595 PDZ domain NHY68_09725 PF11818 C-terminal domain of tail specific protease (DUF3340) NHY68_09725 PF03572 Peptidase family S41 NHY68_09730 PF13439 Glycosyltransferase Family 4 NHY68_09730 PF00534 Glycosyl transferases group 1 NHY68_09735 PF01569 PAP2 superfamily NHY68_09740 PF04384 Iron-sulphur cluster assembly NHY68_09745 PF00334 Nucleoside diphosphate kinase NHY68_09750 PF04055 Radical SAM superfamily NHY68_09760 PF13464 Domain of unknown function (DUF4115) NHY68_09765 PF04551 GcpE protein NHY68_09770 PF03129 Anticodon binding domain NHY68_09770 PF13393 Histidyl-tRNA synthetase NHY68_09780 PF13360 PQQ-like domain NHY68_09785 PF01926 50S ribosome-binding GTPase NHY68_09785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NHY68_09800 PF00550 Phosphopantetheine attachment site NHY68_09805 PF00550 Phosphopantetheine attachment site NHY68_09815 PF00501 AMP-binding enzyme NHY68_09815 PF13193 AMP-binding enzyme C-terminal domain NHY68_09830 PF00221 Aromatic amino acid lyase NHY68_09860 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY68_09860 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY68_09875 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY68_09875 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY68_09890 PF02556 Preprotein translocase subunit SecB NHY68_09895 PF00462 Glutaredoxin NHY68_09905 PF03193 RsgA GTPase NHY68_09910 PF00929 Exonuclease NHY68_09925 PF02321 Outer membrane efflux protein NHY68_09930 PF12704 MacB-like periplasmic core domain NHY68_09930 PF02687 FtsX-like permease family NHY68_09930 PF00005 ABC transporter NHY68_09935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY68_09960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY68_09960 PF00205 Thiamine pyrophosphate enzyme, central domain NHY68_09960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY68_09965 PF10369 Small subunit of acetolactate synthase NHY68_09970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NHY68_09970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NHY68_09975 PF00563 EAL domain NHY68_09975 PF00990 Diguanylate cyclase, GGDEF domain NHY68_09975 PF03707 Bacterial signalling protein N terminal repeat NHY68_09995 PF16658 Class II release factor RF3, C-terminal domain NHY68_09995 PF00009 Elongation factor Tu GTP binding domain NHY68_09995 PF03144 Elongation factor Tu domain 2 NHY68_10010 PF01026 TatD related DNase NHY68_10015 PF00694 Aconitase C-terminal domain NHY68_10015 PF00330 Aconitase family (aconitate hydratase) NHY68_10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_10035 PF03466 LysR substrate binding domain NHY68_10050 PF07690 Major Facilitator Superfamily NHY68_10060 PF00892 EamA-like transporter family NHY68_10070 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NHY68_10080 PF00106 short chain dehydrogenase NHY68_10090 PF01261 Xylose isomerase-like TIM barrel NHY68_10100 PF00378 Enoyl-CoA hydratase/isomerase NHY68_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_10105 PF00512 His Kinase A (phospho-acceptor) domain NHY68_10105 PF01627 Hpt domain NHY68_10105 PF00072 Response regulator receiver domain NHY68_10105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NHY68_10105 PF00672 HAMP domain NHY68_10110 PF00291 Pyridoxal-phosphate dependent enzyme NHY68_10120 PF05958 tRNA (Uracil-5-)-methyltransferase NHY68_10125 PF04607 Region found in RelA / SpoT proteins NHY68_10125 PF02824 TGS domain NHY68_10125 PF13291 ACT domain NHY68_10135 PF03819 MazG nucleotide pyrophosphohydrolase domain NHY68_10145 PF01743 Poly A polymerase head domain NHY68_10145 PF12626 Polymerase A arginine-rich C-terminus NHY68_10145 PF12627 Probable RNA and SrmB- binding site of polymerase A NHY68_10150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NHY68_10155 PF02548 Ketopantoate hydroxymethyltransferase NHY68_10160 PF02569 Pantoate-beta-alanine ligase NHY68_10165 PF03668 P-loop ATPase protein family NHY68_10170 PF00381 PTS HPr component phosphorylation site NHY68_10175 PF04751 Protein of unknown function (DUF615) NHY68_10180 PF00501 AMP-binding enzyme NHY68_10180 PF13193 AMP-binding enzyme C-terminal domain NHY68_10185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NHY68_10185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NHY68_10185 PF03129 Anticodon binding domain NHY68_10185 PF02824 TGS domain NHY68_10190 PF00707 Translation initiation factor IF-3, C-terminal domain NHY68_10190 PF05198 Translation initiation factor IF-3, N-terminal domain NHY68_10195 PF00043 Glutathione S-transferase, C-terminal domain NHY68_10195 PF02798 Glutathione S-transferase, N-terminal domain NHY68_10200 PF09335 SNARE associated Golgi protein NHY68_10215 PF01632 Ribosomal protein L35 NHY68_10220 PF00453 Ribosomal protein L20 NHY68_10240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NHY68_10240 PF01409 tRNA synthetases class II core domain (F) NHY68_10245 PF03483 B3/4 domain NHY68_10245 PF03484 tRNA synthetase B5 domain NHY68_10245 PF03147 Ferredoxin-fold anticodon binding domain NHY68_10245 PF01588 Putative tRNA binding domain NHY68_10245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NHY68_10250 PF00216 Bacterial DNA-binding protein NHY68_10265 PF07498 Rho termination factor, N-terminal domain NHY68_10265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NHY68_10265 PF07497 Rho termination factor, RNA-binding domain NHY68_10270 PF00085 Thioredoxin NHY68_10275 PF02541 Ppx/GppA phosphatase family NHY68_10280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NHY68_10285 PF01171 PP-loop family NHY68_10285 PF11734 TilS substrate C-terminal domain NHY68_10285 PF09179 TilS substrate binding domain NHY68_10290 PF03807 NADP oxidoreductase coenzyme F420-dependent NHY68_10290 PF14748 Pyrroline-5-carboxylate reductase dimerisation NHY68_10295 PF02325 YGGT family NHY68_10300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NHY68_10300 PF00476 DNA polymerase family A NHY68_10300 PF01367 5'-3' exonuclease, C-terminal SAM fold NHY68_10300 PF01612 3'-5' exonuclease NHY68_10320 PF00437 Type II/IV secretion system protein NHY68_10325 PF02566 OsmC-like protein NHY68_10330 PF01047 MarR family NHY68_10340 PF00795 Carbon-nitrogen hydrolase NHY68_10385 PF04963 Sigma-54 factor, core binding domain NHY68_10385 PF00309 Sigma-54 factor, Activator interacting domain (AID) NHY68_10385 PF04552 Sigma-54, DNA binding domain NHY68_10390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NHY68_10395 PF01722 BolA-like protein NHY68_10405 PF01634 ATP phosphoribosyltransferase NHY68_10410 PF00815 Histidinol dehydrogenase NHY68_10420 PF04715 Anthranilate synthase component I, N terminal region NHY68_10420 PF00425 chorismate binding enzyme NHY68_10460 PF00293 NUDIX domain NHY68_10465 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_10470 PF00814 Glycoprotease family NHY68_10475 PF04445 Putative SAM-dependent methyltransferase NHY68_10485 PF00756 Putative esterase NHY68_10495 PF00834 Ribulose-phosphate 3 epimerase family NHY68_10510 PF07731 Multicopper oxidase NHY68_10510 PF00394 Multicopper oxidase NHY68_10510 PF07732 Multicopper oxidase NHY68_10515 PF05275 Copper resistance protein B precursor (CopB) NHY68_10525 PF00893 Small Multidrug Resistance protein NHY68_10530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NHY68_10530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NHY68_10535 PF01960 ArgJ family NHY68_10565 PF00962 Adenosine/AMP deaminase NHY68_10570 PF00107 Zinc-binding dehydrogenase NHY68_10570 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_10575 PF03466 LysR substrate binding domain NHY68_10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_10580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_10580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_10580 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_10590 PF02515 CoA-transferase family III NHY68_10600 PF14537 Cytochrome c3 NHY68_10600 PF00890 FAD binding domain NHY68_10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_10605 PF03466 LysR substrate binding domain NHY68_10615 PF07690 Major Facilitator Superfamily NHY68_10630 PF01546 Peptidase family M20/M25/M40 NHY68_10630 PF07687 Peptidase dimerisation domain NHY68_10635 PF12833 Helix-turn-helix domain NHY68_10635 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NHY68_10645 PF01810 LysE type translocator NHY68_10660 PF08267 Cobalamin-independent synthase, N-terminal domain NHY68_10660 PF01717 Cobalamin-independent synthase, Catalytic domain NHY68_10665 PF01613 Flavin reductase like domain NHY68_10715 PF13360 PQQ-like domain NHY68_10715 PF01011 PQQ enzyme repeat NHY68_10785 PF13755 Sensor N-terminal transmembrane domain NHY68_10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_10785 PF00672 HAMP domain NHY68_10785 PF13756 Stimulus-sensing domain NHY68_10785 PF00512 His Kinase A (phospho-acceptor) domain NHY68_10795 PF00268 Ribonucleotide reductase, small chain NHY68_10815 PF00072 Response regulator receiver domain NHY68_10815 PF00486 Transcriptional regulatory protein, C terminal NHY68_10820 PF00512 His Kinase A (phospho-acceptor) domain NHY68_10820 PF00672 HAMP domain NHY68_10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_10830 PF00990 Diguanylate cyclase, GGDEF domain NHY68_10830 PF17151 Periplasmic sensor domain NHY68_10840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NHY68_10855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NHY68_10855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NHY68_10855 PF10531 SLBB domain NHY68_10860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NHY68_10860 PF00384 Molybdopterin oxidoreductase NHY68_10860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY68_10865 PF00146 NADH dehydrogenase NHY68_10870 PF12838 4Fe-4S dicluster domain NHY68_10875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NHY68_10880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NHY68_10885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NHY68_10885 PF00361 Proton-conducting membrane transporter NHY68_10890 PF00361 Proton-conducting membrane transporter NHY68_10895 PF00361 Proton-conducting membrane transporter NHY68_10905 PF00313 'Cold-shock' DNA-binding domain NHY68_10910 PF03466 LysR substrate binding domain NHY68_10910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_10915 PF00970 Oxidoreductase FAD-binding domain NHY68_10915 PF00175 Oxidoreductase NAD-binding domain NHY68_10930 PF05552 Conserved TM helix NHY68_10945 PF00291 Pyridoxal-phosphate dependent enzyme NHY68_10950 PF13533 Biotin-lipoyl like NHY68_10975 PF01588 Putative tRNA binding domain NHY68_10975 PF09334 tRNA synthetases class I (M) NHY68_10985 PF10609 NUBPL iron-transfer P-loop NTPase NHY68_10990 PF01048 Phosphorylase superfamily NHY68_11005 PF00692 dUTPase NHY68_11035 PF01207 Dihydrouridine synthase (Dus) NHY68_11050 PF03309 Type III pantothenate kinase NHY68_11060 PF01925 Sulfite exporter TauE/SafE NHY68_11070 PF06470 SMC proteins Flexible Hinge Domain NHY68_11070 PF02463 RecF/RecN/SMC N terminal domain NHY68_11080 PF12826 Helix-hairpin-helix motif NHY68_11080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NHY68_11080 PF03120 NAD-dependent DNA ligase OB-fold domain NHY68_11080 PF00533 BRCA1 C Terminus (BRCT) domain NHY68_11080 PF01653 NAD-dependent DNA ligase adenylation domain NHY68_11085 PF00210 Ferritin-like domain NHY68_11090 PF07690 Major Facilitator Superfamily NHY68_11095 PF00982 Glycosyltransferase family 20 NHY68_11105 PF12697 Alpha/beta hydrolase family NHY68_11105 PF08241 Methyltransferase domain NHY68_11110 PF04055 Radical SAM superfamily NHY68_11110 PF00202 Aminotransferase class-III NHY68_11110 PF06968 Biotin and Thiamin Synthesis associated domain NHY68_11115 PF00155 Aminotransferase class I and II NHY68_11130 PF00849 RNA pseudouridylate synthase NHY68_11130 PF01479 S4 domain NHY68_11140 PF02616 Segregation and condensation protein ScpA NHY68_11145 PF01300 Telomere recombination NHY68_11150 PF04315 Elongation factor P hydroxylase NHY68_11155 PF02620 Large ribosomal RNA subunit accumulation protein YceD NHY68_11160 PF01783 Ribosomal L32p protein family NHY68_11165 PF00698 Acyl transferase domain NHY68_11175 PF00550 Phosphopantetheine attachment site NHY68_11180 PF04972 BON domain NHY68_11180 PF01476 LysM domain NHY68_11185 PF02581 Thiamine monophosphate synthase NHY68_11185 PF08543 Phosphomethylpyrimidine kinase NHY68_11185 PF03070 TENA/THI-4/PQQC family NHY68_11195 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NHY68_11210 PF02261 Aspartate decarboxylase NHY68_11215 PF01195 Peptidyl-tRNA hydrolase NHY68_11225 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY68_11225 PF14572 Phosphoribosyl synthetase-associated domain NHY68_11255 PF03550 Outer membrane lipoprotein LolB NHY68_11265 PF01488 Shikimate / quinate 5-dehydrogenase NHY68_11265 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NHY68_11265 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NHY68_11270 PF08278 DNA primase DnaG DnaB-binding NHY68_11270 PF08275 DNA primase catalytic core, N-terminal domain NHY68_11270 PF01807 CHC2 zinc finger NHY68_11270 PF10410 DnaB-helicase binding domain of primase NHY68_11280 PF00849 RNA pseudouridylate synthase NHY68_11280 PF01479 S4 domain NHY68_11285 PF02578 Multi-copper polyphenol oxidoreductase laccase NHY68_11290 PF03358 NADPH-dependent FMN reductase NHY68_11295 PF01668 SmpB protein NHY68_11300 PF01467 Cytidylyltransferase-like NHY68_11305 PF00037 4Fe-4S binding domain NHY68_11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_11325 PF03466 LysR substrate binding domain NHY68_11330 PF00180 Isocitrate/isopropylmalate dehydrogenase NHY68_11335 PF02028 BCCT, betaine/carnitine/choline family transporter NHY68_11345 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY68_11345 PF00355 Rieske [2Fe-2S] domain NHY68_11350 PF00171 Aldehyde dehydrogenase family NHY68_11355 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_11355 PF00175 Oxidoreductase NAD-binding domain NHY68_11355 PF00970 Oxidoreductase FAD-binding domain NHY68_11370 PF02540 NAD synthase NHY68_11370 PF00795 Carbon-nitrogen hydrolase NHY68_11380 PF05726 Pirin C-terminal cupin domain NHY68_11380 PF02678 Pirin NHY68_11385 PF03653 Uncharacterised protein family (UPF0093) NHY68_11390 PF02801 Beta-ketoacyl synthase, C-terminal domain NHY68_11390 PF00109 Beta-ketoacyl synthase, N-terminal domain NHY68_11405 PF00177 Ribosomal protein S7p/S5e NHY68_11415 PF00009 Elongation factor Tu GTP binding domain NHY68_11415 PF03144 Elongation factor Tu domain 2 NHY68_11415 PF03143 Elongation factor Tu C-terminal domain NHY68_11430 PF00583 Acetyltransferase (GNAT) family NHY68_11435 PF04377 Arginine-tRNA-protein transferase, C terminus NHY68_11435 PF04376 Arginine-tRNA-protein transferase, N terminus NHY68_11440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NHY68_11450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NHY68_11450 PF17854 FtsK alpha domain NHY68_11450 PF09397 Ftsk gamma domain NHY68_11450 PF01580 FtsK/SpoIIIE family NHY68_11455 PF01810 LysE type translocator NHY68_11475 PF03776 Septum formation topological specificity factor MinE NHY68_11480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NHY68_11485 PF03775 Septum formation inhibitor MinC, C-terminal domain NHY68_11495 PF01553 Acyltransferase NHY68_11500 PF13488 Glycine zipper NHY68_11500 PF00691 OmpA family NHY68_11505 PF13361 UvrD-like helicase C-terminal domain NHY68_11505 PF00580 UvrD/REP helicase N-terminal domain NHY68_11510 PF00692 dUTPase NHY68_11515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NHY68_11515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NHY68_11515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NHY68_11515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NHY68_11520 PF00696 Amino acid kinase family NHY68_11530 PF13230 Glutamine amidotransferases class-II NHY68_11535 PF01814 Hemerythrin HHE cation binding domain NHY68_11545 PF03658 RnfH family Ubiquitin NHY68_11550 PF04355 SmpA / OmlA family NHY68_11555 PF01475 Ferric uptake regulator family NHY68_11560 PF00437 Type II/IV secretion system protein NHY68_11565 PF00437 Type II/IV secretion system protein NHY68_11570 PF01168 Alanine racemase, N-terminal domain NHY68_11580 PF12320 Type 5 capsule protein repressor C-terminal domain NHY68_11580 PF00149 Calcineurin-like phosphoesterase NHY68_11600 PF01370 NAD dependent epimerase/dehydratase family NHY68_11600 PF08338 Domain of unknown function (DUF1731) NHY68_11605 PF01266 FAD dependent oxidoreductase NHY68_11610 PF00490 Delta-aminolevulinic acid dehydratase NHY68_11615 PF03061 Thioesterase superfamily NHY68_11620 PF13533 Biotin-lipoyl like NHY68_11625 PF07690 Major Facilitator Superfamily NHY68_11665 PF00929 Exonuclease NHY68_11740 PF01555 DNA methylase NHY68_11770 PF01555 DNA methylase NHY68_11775 PF01555 DNA methylase NHY68_11785 PF01695 IstB-like ATP binding protein NHY68_11820 PF00872 Transposase, Mutator family NHY68_12010 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NHY68_12135 PF11798 IMS family HHH motif NHY68_12135 PF00817 impB/mucB/samB family NHY68_12135 PF13438 Domain of unknown function (DUF4113) NHY68_12135 PF11799 impB/mucB/samB family C-terminal domain NHY68_12140 PF00717 Peptidase S24-like NHY68_12190 PF00083 Sugar (and other) transporter NHY68_12195 PF00701 Dihydrodipicolinate synthetase family NHY68_12220 PF13520 Amino acid permease NHY68_12225 PF02574 Homocysteine S-methyltransferase NHY68_12235 PF06039 Malate:quinone oxidoreductase (Mqo) NHY68_12240 PF00732 GMC oxidoreductase NHY68_12240 PF05199 GMC oxidoreductase NHY68_12250 PF00440 Bacterial regulatory proteins, tetR family NHY68_12250 PF13977 BetI-type transcriptional repressor, C-terminal NHY68_12255 PF02028 BCCT, betaine/carnitine/choline family transporter NHY68_12270 PF03061 Thioesterase superfamily NHY68_12280 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY68_12280 PF07683 Cobalamin synthesis protein cobW C-terminal domain NHY68_12295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NHY68_12300 PF14883 Hypothetical glycosyl hydrolase family 13 NHY68_12300 PF01522 Polysaccharide deacetylase NHY68_12305 PF00535 Glycosyl transferase family 2 NHY68_12315 PF00378 Enoyl-CoA hydratase/isomerase NHY68_12330 PF09339 IclR helix-turn-helix domain NHY68_12330 PF01614 Bacterial transcriptional regulator NHY68_12335 PF00355 Rieske [2Fe-2S] domain NHY68_12345 PF00355 Rieske [2Fe-2S] domain NHY68_12355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NHY68_12360 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_12360 PF14759 Reductase C-terminal NHY68_12365 PF07690 Major Facilitator Superfamily NHY68_12375 PF12697 Alpha/beta hydrolase family NHY68_12385 PF01958 Domain of unknown function DUF108 NHY68_12385 PF03447 Homoserine dehydrogenase, NAD binding domain NHY68_12395 PF00205 Thiamine pyrophosphate enzyme, central domain NHY68_12395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NHY68_12395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NHY68_12405 PF07690 Major Facilitator Superfamily NHY68_12410 PF01327 Polypeptide deformylase NHY68_12420 PF02311 AraC-like ligand binding domain NHY68_12420 PF12833 Helix-turn-helix domain NHY68_12425 PF07690 Major Facilitator Superfamily NHY68_12430 PF01263 Aldose 1-epimerase NHY68_12440 PF03466 LysR substrate binding domain NHY68_12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_12450 PF07690 Major Facilitator Superfamily NHY68_12455 PF00456 Transketolase, thiamine diphosphate binding domain NHY68_12460 PF02779 Transketolase, pyrimidine binding domain NHY68_12460 PF02780 Transketolase, C-terminal domain NHY68_12465 PF02310 B12 binding domain NHY68_12465 PF02607 B12 binding domain NHY68_12465 PF02965 Vitamin B12 dependent methionine synthase, activation domain NHY68_12465 PF00809 Pterin binding enzyme NHY68_12465 PF02574 Homocysteine S-methyltransferase NHY68_12490 PF03781 Sulfatase-modifying factor enzyme 1 NHY68_12495 PF00884 Sulfatase NHY68_12505 PF01106 NifU-like domain NHY68_12505 PF01521 Iron-sulphur cluster biosynthesis NHY68_12510 PF07715 TonB-dependent Receptor Plug Domain NHY68_12510 PF00593 TonB dependent receptor NHY68_12520 PF00561 alpha/beta hydrolase fold NHY68_12525 PF00484 Carbonic anhydrase NHY68_12530 PF13472 GDSL-like Lipase/Acylhydrolase family NHY68_12535 PF00005 ABC transporter NHY68_12545 PF01694 Rhomboid family NHY68_12550 PF00912 Transglycosylase NHY68_12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_12565 PF03466 LysR substrate binding domain NHY68_12570 PF00561 alpha/beta hydrolase fold NHY68_12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_12575 PF18113 Rubredoxin binding C-terminal domain NHY68_12580 PF00301 Rubredoxin NHY68_12600 PF14052 Capsule assembly protein Wzi NHY68_12610 PF01507 Phosphoadenosine phosphosulfate reductase family NHY68_12615 PF00009 Elongation factor Tu GTP binding domain NHY68_12635 PF03471 Transporter associated domain NHY68_12635 PF01595 Cyclin M transmembrane N-terminal domain NHY68_12635 PF00571 CBS domain NHY68_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_12640 PF03466 LysR substrate binding domain NHY68_12645 PF00463 Isocitrate lyase family NHY68_12660 PF01774 UreD urease accessory protein NHY68_12665 PF00547 Urease, gamma subunit NHY68_12670 PF00699 Urease beta subunit NHY68_12680 PF05194 UreE urease accessory protein, C-terminal domain NHY68_12680 PF02814 UreE urease accessory protein, N-terminal domain NHY68_12685 PF01730 UreF NHY68_12690 PF02492 CobW/HypB/UreG, nucleotide-binding domain NHY68_12705 PF03717 Penicillin-binding Protein dimerisation domain NHY68_12705 PF00905 Penicillin binding protein transpeptidase domain NHY68_12720 PF05191 Adenylate kinase, active site lid NHY68_12730 PF10576 Iron-sulfur binding domain of endonuclease III NHY68_12730 PF00633 Helix-hairpin-helix motif NHY68_12730 PF00730 HhH-GPD superfamily base excision DNA repair protein NHY68_12735 PF04060 Putative Fe-S cluster NHY68_12740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NHY68_12740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NHY68_12750 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NHY68_12755 PF02590 Predicted SPOUT methyltransferase NHY68_12760 PF02190 ATP-dependent protease La (LON) substrate-binding domain NHY68_12760 PF00004 ATPase family associated with various cellular activities (AAA) NHY68_12760 PF05362 Lon protease (S16) C-terminal proteolytic domain NHY68_12770 PF13737 Transposase DDE domain NHY68_12780 PF00691 OmpA family NHY68_12780 PF04355 SmpA / OmlA family NHY68_12785 PF01812 5-formyltetrahydrofolate cyclo-ligase family NHY68_13110 PF01476 LysM domain NHY68_13110 PF08525 Opacity-associated protein A N-terminal motif NHY68_13110 PF01551 Peptidase family M23 NHY68_13195 PF05195 Aminopeptidase P, N-terminal domain NHY68_13195 PF00557 Metallopeptidase family M24 NHY68_13200 PF01494 FAD binding domain NHY68_13215 PF13411 MerR HTH family regulatory protein NHY68_13225 PF01810 LysE type translocator NHY68_13245 PF13610 DDE domain NHY68_13260 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_13270 PF00893 Small Multidrug Resistance protein NHY68_13290 PF07091 Ribosomal RNA methyltransferase (FmrO) NHY68_13305 PF00005 ABC transporter NHY68_13305 PF12848 ABC transporter NHY68_13310 PF01636 Phosphotransferase enzyme family NHY68_13320 PF03050 Transposase IS66 family NHY68_13320 PF13817 IS66 C-terminal element NHY68_13320 PF13007 Transposase C of IS166 homeodomain NHY68_13320 PF13005 zinc-finger binding domain of transposase IS66 NHY68_13345 PF13610 DDE domain NHY68_13370 PF16123 Hydroxyacylglutathione hydrolase C-terminus NHY68_13370 PF00753 Metallo-beta-lactamase superfamily NHY68_13375 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_13380 PF09383 NIL domain NHY68_13380 PF00005 ABC transporter NHY68_13385 PF03180 NLPA lipoprotein NHY68_13390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NHY68_13390 PF02843 Phosphoribosylglycinamide synthetase, C domain NHY68_13390 PF02844 Phosphoribosylglycinamide synthetase, N domain NHY68_13395 PF01808 AICARFT/IMPCHase bienzyme NHY68_13395 PF02142 MGS-like domain NHY68_13400 PF02954 Bacterial regulatory protein, Fis family NHY68_13420 PF01134 Glucose inhibited division protein A NHY68_13420 PF13932 GidA associated domain NHY68_13430 PF14403 Circularly permuted ATP-grasp type 2 NHY68_13440 PF08379 Bacterial transglutaminase-like N-terminal region NHY68_13440 PF01841 Transglutaminase-like superfamily NHY68_13450 PF01168 Alanine racemase, N-terminal domain NHY68_13450 PF00842 Alanine racemase, C-terminal domain NHY68_13455 PF03796 DnaB-like helicase C terminal domain NHY68_13455 PF00772 DnaB-like helicase N terminal domain NHY68_13460 PF03948 Ribosomal protein L9, C-terminal domain NHY68_13460 PF01281 Ribosomal protein L9, N-terminal domain NHY68_13465 PF01084 Ribosomal protein S18 NHY68_13470 PF01250 Ribosomal protein S6 NHY68_13475 PF01040 UbiA prenyltransferase family NHY68_13480 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NHY68_13485 PF00510 Cytochrome c oxidase subunit III NHY68_13490 PF00115 Cytochrome C and Quinol oxidase polypeptide I NHY68_13505 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NHY68_13505 PF00391 PEP-utilising enzyme, mobile domain NHY68_13505 PF02896 PEP-utilising enzyme, TIM barrel domain NHY68_13510 PF03618 Kinase/pyrophosphorylase NHY68_13520 PF14883 Hypothetical glycosyl hydrolase family 13 NHY68_13520 PF01522 Polysaccharide deacetylase NHY68_13525 PF00535 Glycosyl transferase family 2 NHY68_13530 PF13994 PgaD-like protein NHY68_13540 PF00296 Luciferase-like monooxygenase NHY68_13565 PF03462 PCRF domain NHY68_13565 PF00472 RF-1 domain NHY68_13570 PF13847 Methyltransferase domain NHY68_13570 PF17827 PrmC N-terminal domain NHY68_13580 PF09084 NMT1/THI5 like NHY68_13585 PF12833 Helix-turn-helix domain NHY68_13590 PF00106 short chain dehydrogenase NHY68_13605 PF01613 Flavin reductase like domain NHY68_13610 PF00899 ThiF family NHY68_13615 PF03109 ABC1 family NHY68_13650 PF00486 Transcriptional regulatory protein, C terminal NHY68_13650 PF00072 Response regulator receiver domain NHY68_13655 PF00120 Glutamine synthetase, catalytic domain NHY68_13665 PF03232 Ubiquinone biosynthesis protein COQ7 NHY68_13670 PF07690 Major Facilitator Superfamily NHY68_13675 PF17243 POTRA domain TamA domain 1 NHY68_13675 PF07244 Surface antigen variable number repeat NHY68_13675 PF01103 Surface antigen NHY68_13690 PF00330 Aconitase family (aconitate hydratase) NHY68_13690 PF06434 Aconitate hydratase 2 N-terminus NHY68_13690 PF11791 Aconitate B N-terminal domain NHY68_13700 PF00027 Cyclic nucleotide-binding domain NHY68_13700 PF00520 Ion transport protein NHY68_13705 PF07690 Major Facilitator Superfamily NHY68_13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_13720 PF03466 LysR substrate binding domain NHY68_13725 PF04284 Protein of unknown function (DUF441) NHY68_13735 PF01479 S4 domain NHY68_13735 PF00849 RNA pseudouridylate synthase NHY68_13755 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NHY68_13760 PF01119 DNA mismatch repair protein, C-terminal domain NHY68_13760 PF08676 MutL C terminal dimerisation domain NHY68_13770 PF17209 Hfq protein NHY68_13780 PF00881 Nitroreductase family NHY68_13790 PF00149 Calcineurin-like phosphoesterase NHY68_13795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NHY68_13800 PF00749 tRNA synthetases class I (E and Q), catalytic domain NHY68_13800 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NHY68_13810 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NHY68_13820 PF13520 Amino acid permease NHY68_13825 PF00171 Aldehyde dehydrogenase family NHY68_13845 PF14493 Helix-turn-helix domain NHY68_13845 PF05970 PIF1-like helicase NHY68_13855 PF06445 GyrI-like small molecule binding domain NHY68_13860 PF02110 Hydroxyethylthiazole kinase family NHY68_13875 PF11940 Domain of unknown function (DUF3458) Ig-like fold NHY68_13875 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NHY68_13875 PF01433 Peptidase family M1 domain NHY68_13885 PF00106 short chain dehydrogenase NHY68_13895 PF01817 Chorismate mutase type II NHY68_13900 PF01037 Lrp/AsnC ligand binding domain NHY68_13910 PF00440 Bacterial regulatory proteins, tetR family NHY68_13920 PF00924 Mechanosensitive ion channel NHY68_13975 PF00005 ABC transporter NHY68_13975 PF12848 ABC transporter NHY68_13980 PF00582 Universal stress protein family NHY68_14010 PF02308 MgtC family NHY68_14020 PF01037 Lrp/AsnC ligand binding domain NHY68_14025 PF01810 LysE type translocator NHY68_14030 PF00923 Transaldolase/Fructose-6-phosphate aldolase NHY68_14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_14035 PF03466 LysR substrate binding domain NHY68_14055 PF01575 MaoC like domain NHY68_14060 PF00144 Beta-lactamase NHY68_14070 PF07690 Major Facilitator Superfamily NHY68_14075 PF12169 DNA polymerase III subunits gamma and tau domain III NHY68_14075 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NHY68_14075 PF12170 DNA polymerase III tau subunit V interacting with alpha NHY68_14085 PF03061 Thioesterase superfamily NHY68_14100 PF01451 Low molecular weight phosphotyrosine protein phosphatase NHY68_14105 PF01565 FAD binding domain NHY68_14105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NHY68_14120 PF01645 Conserved region in glutamate synthase NHY68_14150 PF00289 Biotin carboxylase, N-terminal domain NHY68_14150 PF02785 Biotin carboxylase C-terminal domain NHY68_14150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY68_14155 PF00364 Biotin-requiring enzyme NHY68_14160 PF01220 Dehydroquinase class II NHY68_14175 PF00005 ABC transporter NHY68_14180 PF00072 Response regulator receiver domain NHY68_14180 PF00486 Transcriptional regulatory protein, C terminal NHY68_14195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NHY68_14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_14195 PF18267 Rubredoxin NAD+ reductase C-terminal domain NHY68_14195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NHY68_14195 PF04324 BFD-like [2Fe-2S] binding domain NHY68_14200 PF04324 BFD-like [2Fe-2S] binding domain NHY68_14200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NHY68_14200 PF00384 Molybdopterin oxidoreductase NHY68_14200 PF01568 Molydopterin dinucleotide binding domain NHY68_14205 PF12804 MobA-like NTP transferase domain NHY68_14225 PF02391 MoaE protein NHY68_14230 PF00994 Probable molybdopterin binding domain NHY68_14230 PF01967 MoaC family NHY68_14235 PF00994 Probable molybdopterin binding domain NHY68_14235 PF03454 MoeA C-terminal region (domain IV) NHY68_14235 PF03453 MoeA N-terminal region (domain I and II) NHY68_14240 PF01638 HxlR-like helix-turn-helix NHY68_14245 PF00155 Aminotransferase class I and II NHY68_14245 PF00392 Bacterial regulatory proteins, gntR family NHY68_14270 PF02635 DsrE/DsrF-like family NHY68_14280 PF10415 Fumarase C C-terminus NHY68_14280 PF00206 Lyase NHY68_14300 PF01266 FAD dependent oxidoreductase NHY68_14310 PF02542 YgbB family NHY68_14320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NHY68_14320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NHY68_14325 PF00440 Bacterial regulatory proteins, tetR family NHY68_14330 PF02954 Bacterial regulatory protein, Fis family NHY68_14330 PF00072 Response regulator receiver domain NHY68_14330 PF00158 Sigma-54 interaction domain NHY68_14335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_14335 PF00512 His Kinase A (phospho-acceptor) domain NHY68_14335 PF00989 PAS fold NHY68_14340 PF04055 Radical SAM superfamily NHY68_14340 PF18693 TRAM domain NHY68_14340 PF00919 Uncharacterized protein family UPF0004 NHY68_14350 PF01765 Ribosome recycling factor NHY68_14355 PF01255 Putative undecaprenyl diphosphate synthase NHY68_14365 PF13288 DXP reductoisomerase C-terminal domain NHY68_14365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NHY68_14365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NHY68_14370 PF13180 PDZ domain NHY68_14370 PF17820 PDZ domain NHY68_14370 PF02163 Peptidase family M50 NHY68_14375 PF01103 Surface antigen NHY68_14375 PF07244 Surface antigen variable number repeat NHY68_14385 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_14385 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NHY68_14390 PF07977 FabA-like domain NHY68_14410 PF02631 RecX family NHY68_14415 PF00154 recA bacterial DNA recombination protein NHY68_14420 PF01479 S4 domain NHY68_14425 PF13419 Haloacid dehalogenase-like hydrolase NHY68_14450 PF01037 Lrp/AsnC ligand binding domain NHY68_14455 PF00266 Aminotransferase class-V NHY68_14485 PF02586 SOS response associated peptidase (SRAP) NHY68_14490 PF07995 Glucose / Sorbosone dehydrogenase NHY68_14500 PF00563 EAL domain NHY68_14500 PF03707 Bacterial signalling protein N terminal repeat NHY68_14500 PF00990 Diguanylate cyclase, GGDEF domain NHY68_14520 PF02378 Phosphotransferase system, EIIC NHY68_14520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NHY68_14535 PF05524 PEP-utilising enzyme, N-terminal NHY68_14535 PF00391 PEP-utilising enzyme, mobile domain NHY68_14535 PF02896 PEP-utilising enzyme, TIM barrel domain NHY68_14535 PF00381 PTS HPr component phosphorylation site NHY68_14535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NHY68_14565 PF05525 Branched-chain amino acid transport protein NHY68_14570 PF00557 Metallopeptidase family M24 NHY68_14575 PF03466 LysR substrate binding domain NHY68_14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_14585 PF00462 Glutaredoxin NHY68_14590 PF00202 Aminotransferase class-III NHY68_14595 PF00478 IMP dehydrogenase / GMP reductase domain NHY68_14595 PF00571 CBS domain NHY68_14630 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NHY68_14645 PF08173 Membrane bound YbgT-like protein NHY68_14650 PF02322 Cytochrome bd terminal oxidase subunit II NHY68_14655 PF01654 Cytochrome bd terminal oxidase subunit I NHY68_14665 PF07290 Protein of unknown function (DUF1449) NHY68_14675 PF00294 pfkB family carbohydrate kinase NHY68_14695 PF02386 Cation transport protein NHY68_14700 PF02080 TrkA-C domain NHY68_14700 PF02254 TrkA-N domain NHY68_14705 PF00291 Pyridoxal-phosphate dependent enzyme NHY68_14705 PF00585 C-terminal regulatory domain of Threonine dehydratase NHY68_14710 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NHY68_14730 PF02566 OsmC-like protein NHY68_14740 PF13545 Crp-like helix-turn-helix domain NHY68_14740 PF00027 Cyclic nucleotide-binding domain NHY68_14750 PF02774 Semialdehyde dehydrogenase, dimerisation domain NHY68_14750 PF01118 Semialdehyde dehydrogenase, NAD binding domain NHY68_14765 PF00004 ATPase family associated with various cellular activities (AAA) NHY68_14765 PF07724 AAA domain (Cdc48 subfamily) NHY68_14765 PF17871 AAA lid domain NHY68_14765 PF02861 Clp amino terminal domain, pathogenicity island component NHY68_14765 PF10431 C-terminal, D2-small domain, of ClpB protein NHY68_14770 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NHY68_14825 PF06418 CTP synthase N-terminus NHY68_14825 PF00117 Glutamine amidotransferase class-I NHY68_14830 PF00793 DAHP synthetase I family NHY68_14835 PF00113 Enolase, C-terminal TIM barrel domain NHY68_14835 PF03952 Enolase, N-terminal domain NHY68_14840 PF04239 Protein of unknown function (DUF421) NHY68_14845 PF04977 Septum formation initiator NHY68_14850 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NHY68_14855 PF01144 Coenzyme A transferase NHY68_14860 PF01144 Coenzyme A transferase NHY68_14865 PF02803 Thiolase, C-terminal domain NHY68_14865 PF00108 Thiolase, N-terminal domain NHY68_14870 PF10397 Adenylosuccinate lyase C-terminus NHY68_14870 PF00206 Lyase NHY68_14875 PF00561 alpha/beta hydrolase fold NHY68_14880 PF07690 Major Facilitator Superfamily NHY68_14885 PF02627 Carboxymuconolactone decarboxylase family NHY68_14895 PF00775 Dioxygenase NHY68_14900 PF01487 Type I 3-dehydroquinase NHY68_14905 PF05048 Periplasmic copper-binding protein (NosD) NHY68_14915 PF01011 PQQ enzyme repeat NHY68_14915 PF13360 PQQ-like domain NHY68_14925 PF04143 Sulphur transport NHY68_14935 PF00753 Metallo-beta-lactamase superfamily NHY68_14940 PF09339 IclR helix-turn-helix domain NHY68_14940 PF01614 Bacterial transcriptional regulator NHY68_14950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_14950 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_14950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_14965 PF00106 short chain dehydrogenase NHY68_14975 PF07690 Major Facilitator Superfamily NHY68_14985 PF01425 Amidase NHY68_14990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY68_15005 PF00355 Rieske [2Fe-2S] domain NHY68_15005 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NHY68_15020 PF00175 Oxidoreductase NAD-binding domain NHY68_15020 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_15025 PF01613 Flavin reductase like domain NHY68_15035 PF02728 Copper amine oxidase, N3 domain NHY68_15035 PF02727 Copper amine oxidase, N2 domain NHY68_15035 PF07833 Copper amine oxidase N-terminal domain NHY68_15035 PF01179 Copper amine oxidase, enzyme domain NHY68_15045 PF00171 Aldehyde dehydrogenase family NHY68_15050 PF01804 Penicillin amidase NHY68_15055 PF12146 Serine aminopeptidase, S33 NHY68_15060 PF00108 Thiolase, N-terminal domain NHY68_15060 PF02803 Thiolase, C-terminal domain NHY68_15065 PF01144 Coenzyme A transferase NHY68_15070 PF01144 Coenzyme A transferase NHY68_15075 PF00775 Dioxygenase NHY68_15075 PF04444 Catechol dioxygenase N terminus NHY68_15080 PF02426 Muconolactone delta-isomerase NHY68_15085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NHY68_15085 PF13378 Enolase C-terminal domain-like NHY68_15100 PF00392 Bacterial regulatory proteins, gntR family NHY68_15100 PF07729 FCD domain NHY68_15110 PF07690 Major Facilitator Superfamily NHY68_15120 PF00171 Aldehyde dehydrogenase family NHY68_15140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_15140 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_15140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_15150 PF00158 Sigma-54 interaction domain NHY68_15150 PF02954 Bacterial regulatory protein, Fis family NHY68_15150 PF06506 Propionate catabolism activator NHY68_15155 PF00501 AMP-binding enzyme NHY68_15155 PF13193 AMP-binding enzyme C-terminal domain NHY68_15160 PF04341 Protein of unknown function, DUF485 NHY68_15165 PF00474 Sodium:solute symporter family NHY68_15175 PF00171 Aldehyde dehydrogenase family NHY68_15185 PF00561 alpha/beta hydrolase fold NHY68_15205 PF07859 alpha/beta hydrolase fold NHY68_15210 PF01047 MarR family NHY68_15220 PF00106 short chain dehydrogenase NHY68_15225 PF01872 RibD C-terminal domain NHY68_15230 PF00376 MerR family regulatory protein NHY68_15230 PF09278 MerR, DNA binding NHY68_15240 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_15250 PF12706 Beta-lactamase superfamily domain NHY68_15255 PF00440 Bacterial regulatory proteins, tetR family NHY68_15255 PF08359 YsiA-like protein, C-terminal region NHY68_15265 PF00857 Isochorismatase family NHY68_15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_15270 PF03466 LysR substrate binding domain NHY68_15275 PF07995 Glucose / Sorbosone dehydrogenase NHY68_15290 PF01546 Peptidase family M20/M25/M40 NHY68_15290 PF07687 Peptidase dimerisation domain NHY68_15320 PF07690 Major Facilitator Superfamily NHY68_15325 PF04909 Amidohydrolase NHY68_15340 PF08450 SMP-30/Gluconolactonase/LRE-like region NHY68_15350 PF03466 LysR substrate binding domain NHY68_15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_15370 PF07690 Major Facilitator Superfamily NHY68_15375 PF01842 ACT domain NHY68_15375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NHY68_15375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NHY68_15380 PF03737 Aldolase/RraA NHY68_15410 PF00529 HlyD membrane-fusion protein of T1SS NHY68_15410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY68_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_15440 PF03466 LysR substrate binding domain NHY68_15445 PF01370 NAD dependent epimerase/dehydratase family NHY68_15455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NHY68_15455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NHY68_15485 PF01032 FecCD transport family NHY68_15510 PF14572 Phosphoribosyl synthetase-associated domain NHY68_15510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NHY68_15515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NHY68_15595 PF00196 Bacterial regulatory proteins, luxR family NHY68_15600 PF01425 Amidase NHY68_15605 PF13533 Biotin-lipoyl like NHY68_15610 PF07690 Major Facilitator Superfamily NHY68_15635 PF01975 Survival protein SurE NHY68_15645 PF13291 ACT domain NHY68_15645 PF04607 Region found in RelA / SpoT proteins NHY68_15645 PF02824 TGS domain NHY68_15695 PF12146 Serine aminopeptidase, S33 NHY68_15710 PF16527 Two-component sensor protein CpxA, periplasmic domain NHY68_15710 PF00672 HAMP domain NHY68_15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NHY68_15710 PF00512 His Kinase A (phospho-acceptor) domain NHY68_15715 PF00072 Response regulator receiver domain NHY68_15715 PF00486 Transcriptional regulatory protein, C terminal NHY68_15720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY68_15720 PF00529 HlyD membrane-fusion protein of T1SS NHY68_15725 PF00873 AcrB/AcrD/AcrF family NHY68_15735 PF12146 Serine aminopeptidase, S33 NHY68_15760 PF01266 FAD dependent oxidoreductase NHY68_15780 PF16970 Type-1 fimbrial protein, A NHY68_15790 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY68_15790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY68_15800 PF00419 Fimbrial protein NHY68_15810 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_15810 PF00107 Zinc-binding dehydrogenase NHY68_15820 PF00199 Catalase NHY68_15835 PF13091 PLD-like domain NHY68_15850 PF01244 Membrane dipeptidase (Peptidase family M19) NHY68_15855 PF04055 Radical SAM superfamily NHY68_15855 PF13186 Iron-sulfur cluster-binding domain NHY68_15860 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NHY68_15865 PF03070 TENA/THI-4/PQQC family NHY68_15870 PF12706 Beta-lactamase superfamily domain NHY68_15875 PF08042 PqqA family NHY68_15895 PF00550 Phosphopantetheine attachment site NHY68_15895 PF00857 Isochorismatase family NHY68_15900 PF00106 short chain dehydrogenase NHY68_15905 PF00005 ABC transporter NHY68_15905 PF03459 TOBE domain NHY68_15910 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_15920 PF03459 TOBE domain NHY68_15930 PF00866 Ring hydroxylating beta subunit NHY68_15935 PF00970 Oxidoreductase FAD-binding domain NHY68_15935 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_15935 PF00175 Oxidoreductase NAD-binding domain NHY68_15950 PF01613 Flavin reductase like domain NHY68_15965 PF01738 Dienelactone hydrolase family NHY68_15970 PF07690 Major Facilitator Superfamily NHY68_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_16000 PF03466 LysR substrate binding domain NHY68_16005 PF01144 Coenzyme A transferase NHY68_16010 PF01144 Coenzyme A transferase NHY68_16015 PF02667 Short chain fatty acid transporter NHY68_16020 PF02803 Thiolase, C-terminal domain NHY68_16020 PF00108 Thiolase, N-terminal domain NHY68_16025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_16025 PF03466 LysR substrate binding domain NHY68_16030 PF03466 LysR substrate binding domain NHY68_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_16055 PF00083 Sugar (and other) transporter NHY68_16070 PF00005 ABC transporter NHY68_16080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY68_16095 PF00392 Bacterial regulatory proteins, gntR family NHY68_16095 PF07702 UTRA domain NHY68_16105 PF02525 Flavodoxin-like fold NHY68_16110 PF01638 HxlR-like helix-turn-helix NHY68_16115 PF06445 GyrI-like small molecule binding domain NHY68_16115 PF12833 Helix-turn-helix domain NHY68_16130 PF01925 Sulfite exporter TauE/SafE NHY68_16150 PF02954 Bacterial regulatory protein, Fis family NHY68_16150 PF00158 Sigma-54 interaction domain NHY68_16150 PF00072 Response regulator receiver domain NHY68_16155 PF01062 Bestrophin, RFP-TM, chloride channel NHY68_16165 PF00106 short chain dehydrogenase NHY68_16170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NHY68_16170 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_16175 PF00364 Biotin-requiring enzyme NHY68_16175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NHY68_16175 PF02817 e3 binding domain NHY68_16180 PF02780 Transketolase, C-terminal domain NHY68_16180 PF02779 Transketolase, pyrimidine binding domain NHY68_16185 PF00676 Dehydrogenase E1 component NHY68_16190 PF04055 Radical SAM superfamily NHY68_16205 PF00990 Diguanylate cyclase, GGDEF domain NHY68_16205 PF08448 PAS fold NHY68_16210 PF01264 Chorismate synthase NHY68_16215 PF05175 Methyltransferase small domain NHY68_16220 PF00291 Pyridoxal-phosphate dependent enzyme NHY68_16230 PF00004 ATPase family associated with various cellular activities (AAA) NHY68_16230 PF17862 AAA+ lid domain NHY68_16230 PF01434 Peptidase family M41 NHY68_16240 PF05166 YcgL domain NHY68_16260 PF00570 HRDC domain NHY68_16260 PF01612 3'-5' exonuclease NHY68_16265 PF02132 RecR protein NHY68_16265 PF13662 Toprim domain NHY68_16270 PF02575 YbaB/EbfC DNA-binding family NHY68_16280 PF01053 Cys/Met metabolism PLP-dependent enzyme NHY68_16285 PF00561 alpha/beta hydrolase fold NHY68_16290 PF08241 Methyltransferase domain NHY68_16320 PF01230 HIT domain NHY68_16360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NHY68_16370 PF02684 Lipid-A-disaccharide synthetase NHY68_16375 PF07715 TonB-dependent Receptor Plug Domain NHY68_16375 PF00593 TonB dependent receptor NHY68_16395 PF01925 Sulfite exporter TauE/SafE NHY68_16400 PF00793 DAHP synthetase I family NHY68_16405 PF02654 Cobalamin-5-phosphate synthase NHY68_16420 PF02277 Phosphoribosyltransferase NHY68_16425 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NHY68_16460 PF07715 TonB-dependent Receptor Plug Domain NHY68_16460 PF00593 TonB dependent receptor NHY68_16475 PF06276 Ferric iron reductase FhuF-like transporter NHY68_16475 PF04183 IucA / IucC family NHY68_16480 PF06276 Ferric iron reductase FhuF-like transporter NHY68_16480 PF04183 IucA / IucC family NHY68_16485 PF07690 Major Facilitator Superfamily NHY68_16490 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NHY68_16495 PF06276 Ferric iron reductase FhuF-like transporter NHY68_16495 PF04183 IucA / IucC family NHY68_16500 PF04073 Aminoacyl-tRNA editing domain NHY68_16510 PF03109 ABC1 family NHY68_16515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_16515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_16515 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_16520 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_16520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_16520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_16530 PF12852 Cupin NHY68_16530 PF12833 Helix-turn-helix domain NHY68_16535 PF00639 PPIC-type PPIASE domain NHY68_16535 PF09312 SurA N-terminal domain NHY68_16540 PF00216 Bacterial DNA-binding protein NHY68_16555 PF02082 Transcriptional regulator NHY68_16560 PF00266 Aminotransferase class-V NHY68_16565 PF01592 NifU-like N terminal domain NHY68_16570 PF01521 Iron-sulphur cluster biosynthesis NHY68_16575 PF00226 DnaJ domain NHY68_16575 PF07743 HSCB C-terminal oligomerisation domain NHY68_16580 PF00012 Hsp70 protein NHY68_16585 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_16590 PF00211 Adenylate and Guanylate cyclase catalytic domain NHY68_16600 PF00271 Helicase conserved C-terminal domain NHY68_16600 PF03461 TRCF domain NHY68_16600 PF17757 UvrB interaction domain NHY68_16600 PF02559 CarD-like/TRCF domain NHY68_16600 PF00270 DEAD/DEAH box helicase NHY68_16620 PF03737 Aldolase/RraA NHY68_16625 PF13460 NAD(P)H-binding NHY68_16630 PF01649 Ribosomal protein S20 NHY68_16640 PF00459 Inositol monophosphatase family NHY68_16655 PF00005 ABC transporter NHY68_16655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NHY68_16660 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_16665 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_16670 PF01432 Peptidase family M3 NHY68_16700 PF01618 MotA/TolQ/ExbB proton channel family NHY68_16705 PF02472 Biopolymer transport protein ExbD/TolR NHY68_16710 PF02472 Biopolymer transport protein ExbD/TolR NHY68_16735 PF00743 Flavin-binding monooxygenase-like NHY68_16745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NHY68_16755 PF00216 Bacterial DNA-binding protein NHY68_16760 PF00575 S1 RNA binding domain NHY68_16765 PF02224 Cytidylate kinase NHY68_16775 PF14437 MafB19-like deaminase NHY68_16785 PF03167 Uracil DNA glycosylase superfamily NHY68_16795 PF03934 Type II secretion system (T2SS), protein K NHY68_16820 PF01026 TatD related DNase NHY68_16830 PF09115 DNA polymerase III, delta subunit, C terminal NHY68_16835 PF02348 Cytidylyltransferase NHY68_16840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NHY68_16845 PF00664 ABC transporter transmembrane region NHY68_16845 PF00005 ABC transporter NHY68_16855 PF01618 MotA/TolQ/ExbB proton channel family NHY68_16860 PF17762 HTH domain found in ParB protein NHY68_16860 PF02195 ParB-like nuclease domain NHY68_16865 PF13614 AAA domain NHY68_16870 PF02527 rRNA small subunit methyltransferase G NHY68_16875 PF00483 Nucleotidyl transferase NHY68_16890 PF00639 PPIC-type PPIASE domain NHY68_16890 PF09312 SurA N-terminal domain NHY68_16895 PF01116 Fructose-bisphosphate aldolase class-II NHY68_16915 PF02545 Maf-like protein NHY68_16920 PF08007 Cupin superfamily protein NHY68_16945 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NHY68_16965 PF01597 Glycine cleavage H-protein NHY68_16970 PF02146 Sir2 family NHY68_16975 PF00474 Sodium:solute symporter family NHY68_16990 PF04229 GrpB protein NHY68_16995 PF05958 tRNA (Uracil-5-)-methyltransferase NHY68_17005 PF09992 Phosphodiester glycosidase NHY68_17015 PF04264 YceI-like domain NHY68_17025 PF02779 Transketolase, pyrimidine binding domain NHY68_17025 PF02780 Transketolase, C-terminal domain NHY68_17025 PF00456 Transketolase, thiamine diphosphate binding domain NHY68_17065 PF02075 Crossover junction endodeoxyribonuclease RuvC NHY68_17070 PF01256 Carbohydrate kinase NHY68_17070 PF03853 YjeF-related protein N-terminus NHY68_17075 PF08331 Domain of unknown function (DUF1730) NHY68_17095 PF16970 Type-1 fimbrial protein, A NHY68_17100 PF02753 Pili assembly chaperone PapD, C-terminal domain NHY68_17100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NHY68_17105 PF13953 PapC C-terminal domain NHY68_17105 PF13954 PapC N-terminal domain NHY68_17105 PF00577 Outer membrane usher protein NHY68_17125 PF00892 EamA-like transporter family NHY68_17135 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY68_17145 PF03466 LysR substrate binding domain NHY68_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_17165 PF00440 Bacterial regulatory proteins, tetR family NHY68_17175 PF01709 Transcriptional regulator NHY68_17180 PF01037 Lrp/AsnC ligand binding domain NHY68_17190 PF00005 ABC transporter NHY68_17195 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_17200 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_17225 PF00296 Luciferase-like monooxygenase NHY68_17230 PF03180 NLPA lipoprotein NHY68_17235 PF03180 NLPA lipoprotein NHY68_17240 PF00005 ABC transporter NHY68_17240 PF09383 NIL domain NHY68_17245 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_17250 PF01926 50S ribosome-binding GTPase NHY68_17250 PF06071 Protein of unknown function (DUF933) NHY68_17275 PF03591 AzlC protein NHY68_17280 PF05437 Branched-chain amino acid transport protein (AzlD) NHY68_17290 PF02222 ATP-grasp domain NHY68_17295 PF08335 GlnD PII-uridylyltransferase NHY68_17295 PF01966 HD domain NHY68_17295 PF01909 Nucleotidyltransferase domain NHY68_17300 PF00155 Aminotransferase class I and II NHY68_17310 PF12852 Cupin NHY68_17310 PF12833 Helix-turn-helix domain NHY68_17315 PF00255 Glutathione peroxidase NHY68_17320 PF01641 SelR domain NHY68_17335 PF00710 Asparaginase, N-terminal NHY68_17335 PF17763 Glutaminase/Asparaginase C-terminal domain NHY68_17340 PF14579 Helix-hairpin-helix motif NHY68_17340 PF07733 Bacterial DNA polymerase III alpha NTPase domain NHY68_17340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NHY68_17340 PF02811 PHP domain NHY68_17340 PF01336 OB-fold nucleic acid binding domain NHY68_17350 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_17365 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_17365 PF13192 Thioredoxin domain NHY68_17380 PF03466 LysR substrate binding domain NHY68_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_17385 PF01758 Sodium Bile acid symporter family NHY68_17390 PF01022 Bacterial regulatory protein, arsR family NHY68_17395 PF03960 ArsC family NHY68_17415 PF03466 LysR substrate binding domain NHY68_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_17425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY68_17430 PF01177 Asp/Glu/Hydantoin racemase NHY68_17435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NHY68_17440 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_17445 PF00005 ABC transporter NHY68_17450 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NHY68_17460 PF00083 Sugar (and other) transporter NHY68_17465 PF00296 Luciferase-like monooxygenase NHY68_17470 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_17470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NHY68_17470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_17480 PF01654 Cytochrome bd terminal oxidase subunit I NHY68_17485 PF02322 Cytochrome bd terminal oxidase subunit II NHY68_17495 PF00155 Aminotransferase class I and II NHY68_17495 PF00392 Bacterial regulatory proteins, gntR family NHY68_17515 PF00698 Acyl transferase domain NHY68_17520 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NHY68_17530 PF01039 Carboxyl transferase domain NHY68_17535 PF06857 Malonate decarboxylase delta subunit (MdcD) NHY68_17540 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NHY68_17545 PF16957 Malonate decarboxylase, alpha subunit, transporter NHY68_17550 PF07690 Major Facilitator Superfamily NHY68_17565 PF00392 Bacterial regulatory proteins, gntR family NHY68_17565 PF00155 Aminotransferase class I and II NHY68_17570 PF04172 LrgB-like family NHY68_17575 PF03788 LrgA family NHY68_17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_17580 PF03466 LysR substrate binding domain NHY68_17585 PF02798 Glutathione S-transferase, N-terminal domain NHY68_17585 PF14834 Glutathione S-transferase, C-terminal domain NHY68_17590 PF02798 Glutathione S-transferase, N-terminal domain NHY68_17605 PF00581 Rhodanese-like domain NHY68_17610 PF00132 Bacterial transferase hexapeptide (six repeats) NHY68_17620 PF00266 Aminotransferase class-V NHY68_17630 PF01810 LysE type translocator NHY68_17635 PF03466 LysR substrate binding domain NHY68_17635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_17645 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY68_17650 PF00497 Bacterial extracellular solute-binding proteins, family 3 NHY68_17655 PF00005 ABC transporter NHY68_17660 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_17680 PF00072 Response regulator receiver domain NHY68_17695 PF01037 Lrp/AsnC ligand binding domain NHY68_17695 PF13404 AsnC-type helix-turn-helix domain NHY68_17705 PF00717 Peptidase S24-like NHY68_17745 PF02464 Competence-damaged protein NHY68_17745 PF00994 Probable molybdopterin binding domain NHY68_17745 PF18146 Damage-inducible protein CinA KH domain NHY68_17780 PF03466 LysR substrate binding domain NHY68_17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_17800 PF00501 AMP-binding enzyme NHY68_17800 PF13193 AMP-binding enzyme C-terminal domain NHY68_17805 PF00440 Bacterial regulatory proteins, tetR family NHY68_17810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_17810 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_17810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_17815 PF01039 Carboxyl transferase domain NHY68_17820 PF00378 Enoyl-CoA hydratase/isomerase NHY68_17825 PF00364 Biotin-requiring enzyme NHY68_17825 PF00289 Biotin carboxylase, N-terminal domain NHY68_17825 PF02785 Biotin carboxylase C-terminal domain NHY68_17825 PF18140 Propionyl-coenzyme A carboxylase BT domain NHY68_17825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY68_17830 PF00682 HMGL-like NHY68_17850 PF12806 Acetyl-CoA dehydrogenase C-terminal like NHY68_17850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_17850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_17850 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_17860 PF07690 Major Facilitator Superfamily NHY68_17870 PF01144 Coenzyme A transferase NHY68_17875 PF01144 Coenzyme A transferase NHY68_17880 PF07690 Major Facilitator Superfamily NHY68_17885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_17885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_17885 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_17890 PF00378 Enoyl-CoA hydratase/isomerase NHY68_17900 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NHY68_17900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NHY68_17900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NHY68_17905 PF00108 Thiolase, N-terminal domain NHY68_17905 PF02803 Thiolase, C-terminal domain NHY68_17910 PF09339 IclR helix-turn-helix domain NHY68_17915 PF07690 Major Facilitator Superfamily NHY68_17920 PF03060 Nitronate monooxygenase NHY68_17930 PF09339 IclR helix-turn-helix domain NHY68_17935 PF02515 CoA-transferase family III NHY68_17940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NHY68_17940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NHY68_17940 PF02770 Acyl-CoA dehydrogenase, middle domain NHY68_17950 PF13419 Haloacid dehalogenase-like hydrolase NHY68_17955 PF00266 Aminotransferase class-V NHY68_17960 PF01266 FAD dependent oxidoreductase NHY68_17965 PF00528 Binding-protein-dependent transport system inner membrane component NHY68_17970 PF08402 TOBE domain NHY68_17970 PF00005 ABC transporter NHY68_17980 PF07702 UTRA domain NHY68_17980 PF00392 Bacterial regulatory proteins, gntR family NHY68_17985 PF01494 FAD binding domain NHY68_17990 PF01614 Bacterial transcriptional regulator NHY68_17990 PF09339 IclR helix-turn-helix domain NHY68_17995 PF02525 Flavodoxin-like fold NHY68_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_18000 PF03466 LysR substrate binding domain NHY68_18005 PF02627 Carboxymuconolactone decarboxylase family NHY68_18010 PF00171 Aldehyde dehydrogenase family NHY68_18020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NHY68_18030 PF00171 Aldehyde dehydrogenase family NHY68_18035 PF00296 Luciferase-like monooxygenase NHY68_18040 PF01613 Flavin reductase like domain NHY68_18065 PF01292 Prokaryotic cytochrome b561 NHY68_18070 PF00199 Catalase NHY68_18105 PF03061 Thioesterase superfamily NHY68_18115 PF08223 PaaX-like protein C-terminal domain NHY68_18115 PF07848 PaaX-like protein NHY68_18120 PF00501 AMP-binding enzyme NHY68_18120 PF14535 AMP-binding enzyme C-terminal domain NHY68_18125 PF02803 Thiolase, C-terminal domain NHY68_18125 PF00108 Thiolase, N-terminal domain NHY68_18135 PF00378 Enoyl-CoA hydratase/isomerase NHY68_18140 PF00378 Enoyl-CoA hydratase/isomerase NHY68_18145 PF00970 Oxidoreductase FAD-binding domain NHY68_18145 PF00111 2Fe-2S iron-sulfur cluster binding domain NHY68_18145 PF00175 Oxidoreductase NAD-binding domain NHY68_18150 PF01883 Iron-sulfur cluster assembly protein NHY68_18155 PF05138 Phenylacetic acid catabolic protein NHY68_18160 PF06243 Phenylacetic acid degradation B NHY68_18165 PF05138 Phenylacetic acid catabolic protein NHY68_18170 PF01575 MaoC like domain NHY68_18170 PF00171 Aldehyde dehydrogenase family NHY68_18185 PF00171 Aldehyde dehydrogenase family NHY68_18200 PF07992 Pyridine nucleotide-disulphide oxidoreductase NHY68_18200 PF04324 BFD-like [2Fe-2S] binding domain NHY68_18220 PF00392 Bacterial regulatory proteins, gntR family NHY68_18230 PF00701 Dihydrodipicolinate synthetase family NHY68_18240 PF00376 MerR family regulatory protein NHY68_18240 PF09278 MerR, DNA binding NHY68_18255 PF02677 Epoxyqueuosine reductase QueH NHY68_18270 PF07690 Major Facilitator Superfamily NHY68_18275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NHY68_18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_18285 PF03466 LysR substrate binding domain NHY68_18305 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NHY68_18310 PF06812 ImpA, N-terminal, type VI secretion system NHY68_18315 PF00004 ATPase family associated with various cellular activities (AAA) NHY68_18315 PF07724 AAA domain (Cdc48 subfamily) NHY68_18315 PF17871 AAA lid domain NHY68_18315 PF10431 C-terminal, D2-small domain, of ClpB protein NHY68_18330 PF00691 OmpA family NHY68_18330 PF01389 OmpA-like transmembrane domain NHY68_18355 PF05947 Type VI secretion system, TssF NHY68_18370 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NHY68_18395 PF00005 ABC transporter NHY68_18405 PF02525 Flavodoxin-like fold NHY68_18425 PF00107 Zinc-binding dehydrogenase NHY68_18425 PF08240 Alcohol dehydrogenase GroES-like domain NHY68_18425 PF13823 Alcohol dehydrogenase GroES-associated NHY68_18435 PF00440 Bacterial regulatory proteins, tetR family NHY68_18460 PF02785 Biotin carboxylase C-terminal domain NHY68_18460 PF00289 Biotin carboxylase, N-terminal domain NHY68_18460 PF00364 Biotin-requiring enzyme NHY68_18460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NHY68_18470 PF07286 Protein of unknown function (DUF1445) NHY68_18475 PF03746 LamB/YcsF family NHY68_18480 PF01566 Natural resistance-associated macrophage protein NHY68_18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NHY68_18485 PF03466 LysR substrate binding domain