locus-tag class description NH456_00005 PF07963 Prokaryotic N-terminal methylation motif NH456_00005 PF02501 Type II secretion system (T2SS), protein I NH456_00010 PF07963 Prokaryotic N-terminal methylation motif NH456_00010 PF11612 Type II secretion system (T2SS), protein J NH456_00015 PF03934 Type II secretion system (T2SS), protein K NH456_00025 PF03167 Uracil DNA glycosylase superfamily NH456_00045 PF02224 Cytidylate kinase NH456_00050 PF00575 S1 RNA binding domain NH456_00055 PF00216 Bacterial DNA-binding protein NH456_00075 PF00743 Flavin-binding monooxygenase-like NH456_00085 PF03969 AFG1-like ATPase NH456_00100 PF02472 Biopolymer transport protein ExbD/TolR NH456_00105 PF02472 Biopolymer transport protein ExbD/TolR NH456_00110 PF01618 MotA/TolQ/ExbB proton channel family NH456_00120 PF07715 TonB-dependent Receptor Plug Domain NH456_00120 PF00593 TonB dependent receptor NH456_00140 PF01432 Peptidase family M3 NH456_00145 PF00528 Binding-protein-dependent transport system inner membrane component NH456_00150 PF00528 Binding-protein-dependent transport system inner membrane component NH456_00170 PF00459 Inositol monophosphatase family NH456_00180 PF01649 Ribosomal protein S20 NH456_00185 PF13460 NAD(P)H-binding NH456_00190 PF03737 Aldolase/RraA NH456_00210 PF02559 CarD-like/TRCF domain NH456_00210 PF00270 DEAD/DEAH box helicase NH456_00210 PF00271 Helicase conserved C-terminal domain NH456_00210 PF03461 TRCF domain NH456_00210 PF17757 UvrB interaction domain NH456_00220 PF00211 Adenylate and Guanylate cyclase catalytic domain NH456_00230 PF00012 Hsp70 protein NH456_00235 PF00226 DnaJ domain NH456_00235 PF07743 HSCB C-terminal oligomerisation domain NH456_00240 PF01521 Iron-sulphur cluster biosynthesis NH456_00245 PF01592 NifU-like N terminal domain NH456_00250 PF00266 Aminotransferase class-V NH456_00255 PF02082 Transcriptional regulator NH456_00270 PF00216 Bacterial DNA-binding protein NH456_00280 PF12852 Cupin NH456_00280 PF12833 Helix-turn-helix domain NH456_00285 PF00487 Fatty acid desaturase NH456_00290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_00290 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_00290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_00295 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_00295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_00295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_00310 PF04073 Aminoacyl-tRNA editing domain NH456_00315 PF06276 Ferric iron reductase FhuF-like transporter NH456_00315 PF04183 IucA / IucC family NH456_00320 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NH456_00325 PF07690 Major Facilitator Superfamily NH456_00335 PF04183 IucA / IucC family NH456_00335 PF06276 Ferric iron reductase FhuF-like transporter NH456_00350 PF00593 TonB dependent receptor NH456_00350 PF07715 TonB-dependent Receptor Plug Domain NH456_00385 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NH456_00390 PF02277 Phosphoribosyltransferase NH456_00405 PF02654 Cobalamin-5-phosphate synthase NH456_00410 PF00793 DAHP synthetase I family NH456_00415 PF01925 Sulfite exporter TauE/SafE NH456_00445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH456_00485 PF01230 HIT domain NH456_00520 PF00561 alpha/beta hydrolase fold NH456_00545 PF01612 3'-5' exonuclease NH456_00545 PF00570 HRDC domain NH456_00565 PF05166 YcgL domain NH456_00575 PF01434 Peptidase family M41 NH456_00575 PF17862 AAA+ lid domain NH456_00575 PF00004 ATPase family associated with various cellular activities (AAA) NH456_00585 PF00291 Pyridoxal-phosphate dependent enzyme NH456_00595 PF01264 Chorismate synthase NH456_00600 PF08448 PAS fold NH456_00600 PF00990 Diguanylate cyclase, GGDEF domain NH456_00615 PF04055 Radical SAM superfamily NH456_00620 PF00676 Dehydrogenase E1 component NH456_00625 PF02779 Transketolase, pyrimidine binding domain NH456_00625 PF02780 Transketolase, C-terminal domain NH456_00630 PF02817 e3 binding domain NH456_00630 PF00364 Biotin-requiring enzyme NH456_00630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NH456_00640 PF00106 short chain dehydrogenase NH456_00650 PF01062 Bestrophin, RFP-TM, chloride channel NH456_00655 PF00072 Response regulator receiver domain NH456_00655 PF00158 Sigma-54 interaction domain NH456_00655 PF02954 Bacterial regulatory protein, Fis family NH456_00660 PF04273 Putative phosphatase (DUF442) NH456_00660 PF00753 Metallo-beta-lactamase superfamily NH456_00675 PF01925 Sulfite exporter TauE/SafE NH456_00690 PF06445 GyrI-like small molecule binding domain NH456_00690 PF12833 Helix-turn-helix domain NH456_00695 PF01638 HxlR-like helix-turn-helix NH456_00700 PF02525 Flavodoxin-like fold NH456_00710 PF00392 Bacterial regulatory proteins, gntR family NH456_00710 PF07702 UTRA domain NH456_00730 PF00528 Binding-protein-dependent transport system inner membrane component NH456_00735 PF00005 ABC transporter NH456_00760 PF00206 Lyase NH456_00760 PF10415 Fumarase C C-terminus NH456_00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_00775 PF03466 LysR substrate binding domain NH456_00780 PF03466 LysR substrate binding domain NH456_00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_00785 PF00108 Thiolase, N-terminal domain NH456_00785 PF02803 Thiolase, C-terminal domain NH456_00790 PF02667 Short chain fatty acid transporter NH456_00795 PF01144 Coenzyme A transferase NH456_00800 PF01144 Coenzyme A transferase NH456_00830 PF12833 Helix-turn-helix domain NH456_00830 PF06719 AraC-type transcriptional regulator N-terminus NH456_00835 PF07690 Major Facilitator Superfamily NH456_00840 PF01738 Dienelactone hydrolase family NH456_00855 PF01613 Flavin reductase like domain NH456_00865 PF12833 Helix-turn-helix domain NH456_00865 PF14525 AraC-binding-like domain NH456_00875 PF00866 Ring hydroxylating beta subunit NH456_00880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH456_00880 PF00355 Rieske [2Fe-2S] domain NH456_00885 PF03459 TOBE domain NH456_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_00895 PF00528 Binding-protein-dependent transport system inner membrane component NH456_00900 PF03459 TOBE domain NH456_00900 PF00005 ABC transporter NH456_00905 PF00106 short chain dehydrogenase NH456_00910 PF00857 Isochorismatase family NH456_00910 PF00550 Phosphopantetheine attachment site NH456_00920 PF00149 Calcineurin-like phosphoesterase NH456_00930 PF08042 PqqA family NH456_00935 PF12706 Beta-lactamase superfamily domain NH456_00940 PF03070 TENA/THI-4/PQQC family NH456_00955 PF01244 Membrane dipeptidase (Peptidase family M19) NH456_00970 PF13091 PLD-like domain NH456_00985 PF00199 Catalase NH456_00995 PF00107 Zinc-binding dehydrogenase NH456_00995 PF08240 Alcohol dehydrogenase GroES-like domain NH456_01005 PF00419 Fimbrial protein NH456_01010 PF00577 Outer membrane usher protein NH456_01010 PF13954 PapC N-terminal domain NH456_01010 PF13953 PapC C-terminal domain NH456_01015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NH456_01015 PF02753 Pili assembly chaperone PapD, C-terminal domain NH456_01025 PF16970 Type-1 fimbrial protein, A NH456_01045 PF01266 FAD dependent oxidoreductase NH456_01060 PF01593 Flavin containing amine oxidoreductase NH456_01065 PF00743 Flavin-binding monooxygenase-like NH456_01070 PF12146 Serine aminopeptidase, S33 NH456_01075 PF02321 Outer membrane efflux protein NH456_01080 PF00873 AcrB/AcrD/AcrF family NH456_01090 PF00486 Transcriptional regulatory protein, C terminal NH456_01090 PF00072 Response regulator receiver domain NH456_01095 PF00672 HAMP domain NH456_01095 PF16527 Two-component sensor protein CpxA, periplasmic domain NH456_01095 PF00512 His Kinase A (phospho-acceptor) domain NH456_01095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_01105 PF12833 Helix-turn-helix domain NH456_01105 PF02311 AraC-like ligand binding domain NH456_01110 PF12146 Serine aminopeptidase, S33 NH456_01160 PF02824 TGS domain NH456_01160 PF04607 Region found in RelA / SpoT proteins NH456_01160 PF13291 ACT domain NH456_01170 PF01975 Survival protein SurE NH456_01195 PF07690 Major Facilitator Superfamily NH456_01200 PF13533 Biotin-lipoyl like NH456_01210 PF00196 Bacterial regulatory proteins, luxR family NH456_01285 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NH456_01290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NH456_01290 PF14572 Phosphoribosyl synthetase-associated domain NH456_01310 PF00005 ABC transporter NH456_01315 PF01032 FecCD transport family NH456_01340 PF06719 AraC-type transcriptional regulator N-terminus NH456_01340 PF12833 Helix-turn-helix domain NH456_01345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH456_01345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH456_01360 PF03466 LysR substrate binding domain NH456_01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_01370 PF00920 Dehydratase family NH456_01375 PF00171 Aldehyde dehydrogenase family NH456_01390 PF00529 HlyD membrane-fusion protein of T1SS NH456_01390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH456_01425 PF03737 Aldolase/RraA NH456_01455 PF03466 LysR substrate binding domain NH456_01455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_01465 PF08450 SMP-30/Gluconolactonase/LRE-like region NH456_01470 PF07702 UTRA domain NH456_01470 PF00392 Bacterial regulatory proteins, gntR family NH456_01480 PF04909 Amidohydrolase NH456_01485 PF07690 Major Facilitator Superfamily NH456_01500 PF13332 Hemagglutinin repeat NH456_01500 PF05860 haemagglutination activity domain NH456_01500 PF04829 Pre-toxin domain with VENN motif NH456_01500 PF13018 Extended Signal Peptide of Type V secretion system NH456_01505 PF08479 POTRA domain, ShlB-type NH456_01505 PF17287 POTRA domain NH456_01505 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NH456_01515 PF07687 Peptidase dimerisation domain NH456_01515 PF01546 Peptidase family M20/M25/M40 NH456_01525 PF02254 TrkA-N domain NH456_01525 PF00999 Sodium/hydrogen exchanger family NH456_01530 PF07995 Glucose / Sorbosone dehydrogenase NH456_01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_01535 PF03466 LysR substrate binding domain NH456_01540 PF00857 Isochorismatase family NH456_01550 PF00440 Bacterial regulatory proteins, tetR family NH456_01550 PF08359 YsiA-like protein, C-terminal region NH456_01565 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_01575 PF00376 MerR family regulatory protein NH456_01575 PF09278 MerR, DNA binding NH456_01580 PF01872 RibD C-terminal domain NH456_01585 PF00106 short chain dehydrogenase NH456_01590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH456_01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_01595 PF01047 MarR family NH456_01615 PF00199 Catalase NH456_01615 PF06628 Catalase-related immune-responsive NH456_01620 PF00561 alpha/beta hydrolase fold NH456_01630 PF00171 Aldehyde dehydrogenase family NH456_01635 PF00107 Zinc-binding dehydrogenase NH456_01635 PF08240 Alcohol dehydrogenase GroES-like domain NH456_01640 PF00474 Sodium:solute symporter family NH456_01645 PF04341 Protein of unknown function, DUF485 NH456_01650 PF00501 AMP-binding enzyme NH456_01650 PF13193 AMP-binding enzyme C-terminal domain NH456_01665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_01665 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_01665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_01685 PF00171 Aldehyde dehydrogenase family NH456_01695 PF07690 Major Facilitator Superfamily NH456_01700 PF00920 Dehydratase family NH456_01705 PF00392 Bacterial regulatory proteins, gntR family NH456_01705 PF07729 FCD domain NH456_01715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_01715 PF03466 LysR substrate binding domain NH456_01720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NH456_01720 PF13378 Enolase C-terminal domain-like NH456_01725 PF02426 Muconolactone delta-isomerase NH456_01730 PF00775 Dioxygenase NH456_01730 PF04444 Catechol dioxygenase N terminus NH456_01735 PF01144 Coenzyme A transferase NH456_01740 PF01144 Coenzyme A transferase NH456_01745 PF02803 Thiolase, C-terminal domain NH456_01745 PF00108 Thiolase, N-terminal domain NH456_01770 PF01179 Copper amine oxidase, enzyme domain NH456_01770 PF07833 Copper amine oxidase N-terminal domain NH456_01770 PF02727 Copper amine oxidase, N2 domain NH456_01770 PF02728 Copper amine oxidase, N3 domain NH456_01785 PF00175 Oxidoreductase NAD-binding domain NH456_01785 PF00111 2Fe-2S iron-sulfur cluster binding domain NH456_01815 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH456_01820 PF01425 Amidase NH456_01830 PF07690 Major Facilitator Superfamily NH456_01840 PF00106 short chain dehydrogenase NH456_01855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_01855 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_01855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_01865 PF09339 IclR helix-turn-helix domain NH456_01865 PF01614 Bacterial transcriptional regulator NH456_01870 PF00753 Metallo-beta-lactamase superfamily NH456_01880 PF04143 Sulphur transport NH456_01890 PF01011 PQQ enzyme repeat NH456_01890 PF13360 PQQ-like domain NH456_01895 PF04966 Carbohydrate-selective porin, OprB family NH456_01900 PF05048 Periplasmic copper-binding protein (NosD) NH456_01905 PF01487 Type I 3-dehydroquinase NH456_01915 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NH456_01915 PF00775 Dioxygenase NH456_01920 PF02627 Carboxymuconolactone decarboxylase family NH456_01930 PF00561 alpha/beta hydrolase fold NH456_01935 PF10397 Adenylosuccinate lyase C-terminus NH456_01935 PF00206 Lyase NH456_01940 PF02803 Thiolase, C-terminal domain NH456_01940 PF00108 Thiolase, N-terminal domain NH456_01945 PF02803 Thiolase, C-terminal domain NH456_01945 PF00108 Thiolase, N-terminal domain NH456_01950 PF02803 Thiolase, C-terminal domain NH456_01950 PF00108 Thiolase, N-terminal domain NH456_01955 PF01144 Coenzyme A transferase NH456_01960 PF01144 Coenzyme A transferase NH456_01965 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NH456_01970 PF04977 Septum formation initiator NH456_01975 PF04239 Protein of unknown function (DUF421) NH456_01980 PF00113 Enolase, C-terminal TIM barrel domain NH456_01980 PF03952 Enolase, N-terminal domain NH456_01985 PF00793 DAHP synthetase I family NH456_01990 PF06418 CTP synthase N-terminus NH456_01990 PF00117 Glutamine amidotransferase class-I NH456_02025 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_02025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH456_02040 PF00793 DAHP synthetase I family NH456_02045 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NH456_02050 PF00004 ATPase family associated with various cellular activities (AAA) NH456_02050 PF17871 AAA lid domain NH456_02050 PF02861 Clp amino terminal domain, pathogenicity island component NH456_02050 PF10431 C-terminal, D2-small domain, of ClpB protein NH456_02050 PF07724 AAA domain (Cdc48 subfamily) NH456_02055 PF02617 ATP-dependent Clp protease adaptor protein ClpS NH456_02065 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH456_02065 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH456_02080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NH456_02085 PF00291 Pyridoxal-phosphate dependent enzyme NH456_02085 PF00585 C-terminal regulatory domain of Threonine dehydratase NH456_02090 PF02080 TrkA-C domain NH456_02090 PF02254 TrkA-N domain NH456_02095 PF02386 Cation transport protein NH456_02100 PF02253 Phospholipase A1 NH456_02105 PF08367 Peptidase M16C associated NH456_02105 PF00675 Insulinase (Peptidase family M16) NH456_02105 PF05193 Peptidase M16 inactive domain NH456_02115 PF00294 pfkB family carbohydrate kinase NH456_02125 PF07290 Protein of unknown function (DUF1449) NH456_02135 PF01654 Cytochrome bd terminal oxidase subunit I NH456_02145 PF08173 Membrane bound YbgT-like protein NH456_02160 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NH456_02195 PF00571 CBS domain NH456_02195 PF00478 IMP dehydrogenase / GMP reductase domain NH456_02200 PF00202 Aminotransferase class-III NH456_02205 PF00462 Glutaredoxin NH456_02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_02215 PF03466 LysR substrate binding domain NH456_02220 PF00557 Metallopeptidase family M24 NH456_02255 PF05524 PEP-utilising enzyme, N-terminal NH456_02255 PF00391 PEP-utilising enzyme, mobile domain NH456_02255 PF02896 PEP-utilising enzyme, TIM barrel domain NH456_02255 PF00381 PTS HPr component phosphorylation site NH456_02255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH456_02265 PF00294 pfkB family carbohydrate kinase NH456_02270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH456_02270 PF02378 Phosphotransferase system, EIIC NH456_02305 PF02586 SOS response associated peptidase (SRAP) NH456_02310 PF01740 STAS domain NH456_02310 PF00916 Sulfate permease family NH456_02315 PF05922 Peptidase inhibitor I9 NH456_02315 PF00082 Subtilase family NH456_02330 PF00324 Amino acid permease NH456_02335 PF00266 Aminotransferase class-V NH456_02365 PF13419 Haloacid dehalogenase-like hydrolase NH456_02375 PF00154 recA bacterial DNA recombination protein NH456_02380 PF02631 RecX family NH456_02395 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NH456_02395 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_02400 PF07977 FabA-like domain NH456_02405 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NH456_02405 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_02420 PF17820 PDZ domain NH456_02420 PF02163 Peptidase family M50 NH456_02420 PF13180 PDZ domain NH456_02435 PF01255 Putative undecaprenyl diphosphate synthase NH456_02440 PF01765 Ribosome recycling factor NH456_02445 PF00696 Amino acid kinase family NH456_02450 PF04055 Radical SAM superfamily NH456_02450 PF18693 TRAM domain NH456_02450 PF00919 Uncharacterized protein family UPF0004 NH456_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_02455 PF00512 His Kinase A (phospho-acceptor) domain NH456_02455 PF00989 PAS fold NH456_02460 PF02954 Bacterial regulatory protein, Fis family NH456_02460 PF00072 Response regulator receiver domain NH456_02460 PF00158 Sigma-54 interaction domain NH456_02465 PF00440 Bacterial regulatory proteins, tetR family NH456_02470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NH456_02470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NH456_02480 PF02542 YgbB family NH456_02490 PF01266 FAD dependent oxidoreductase NH456_02510 PF10415 Fumarase C C-terminus NH456_02510 PF00206 Lyase NH456_02515 PF16363 GDP-mannose 4,6 dehydratase NH456_02520 PF02635 DsrE/DsrF-like family NH456_02545 PF00155 Aminotransferase class I and II NH456_02545 PF00392 Bacterial regulatory proteins, gntR family NH456_02550 PF01638 HxlR-like helix-turn-helix NH456_02555 PF03454 MoeA C-terminal region (domain IV) NH456_02555 PF03453 MoeA N-terminal region (domain I and II) NH456_02555 PF00994 Probable molybdopterin binding domain NH456_02560 PF01967 MoaC family NH456_02560 PF00994 Probable molybdopterin binding domain NH456_02565 PF02391 MoaE protein NH456_02585 PF12804 MobA-like NTP transferase domain NH456_02595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH456_02595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH456_02595 PF04324 BFD-like [2Fe-2S] binding domain NH456_02595 PF18267 Rubredoxin NAD+ reductase C-terminal domain NH456_02595 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_02600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH456_02600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH456_02600 PF18267 Rubredoxin NAD+ reductase C-terminal domain NH456_02600 PF04324 BFD-like [2Fe-2S] binding domain NH456_02600 PF13806 Rieske-like [2Fe-2S] domain NH456_02600 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_02610 PF00072 Response regulator receiver domain NH456_02610 PF00486 Transcriptional regulatory protein, C terminal NH456_02625 PF13438 Domain of unknown function (DUF4113) NH456_02625 PF00817 impB/mucB/samB family NH456_02625 PF11799 impB/mucB/samB family C-terminal domain NH456_02630 PF01220 Dehydroquinase class II NH456_02635 PF00364 Biotin-requiring enzyme NH456_02685 PF01565 FAD binding domain NH456_02685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NH456_02690 PF01451 Low molecular weight phosphotyrosine protein phosphatase NH456_02700 PF00465 Iron-containing alcohol dehydrogenase NH456_02705 PF03061 Thioesterase superfamily NH456_02715 PF12169 DNA polymerase III subunits gamma and tau domain III NH456_02715 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NH456_02715 PF12170 DNA polymerase III tau subunit V interacting with alpha NH456_02720 PF07690 Major Facilitator Superfamily NH456_02745 PF02803 Thiolase, C-terminal domain NH456_02745 PF00108 Thiolase, N-terminal domain NH456_02755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_02755 PF03466 LysR substrate binding domain NH456_02760 PF00923 Transaldolase/Fructose-6-phosphate aldolase NH456_02765 PF01810 LysE type translocator NH456_02770 PF01037 Lrp/AsnC ligand binding domain NH456_02775 PF03594 Benzoate membrane transport protein NH456_02780 PF02308 MgtC family NH456_02785 PF00690 Cation transporter/ATPase, N-terminus NH456_02785 PF00689 Cation transporting ATPase, C-terminus NH456_02810 PF00582 Universal stress protein family NH456_02815 PF00005 ABC transporter NH456_02815 PF12848 ABC transporter NH456_02870 PF00924 Mechanosensitive ion channel NH456_02875 PF07715 TonB-dependent Receptor Plug Domain NH456_02875 PF00593 TonB dependent receptor NH456_02880 PF00440 Bacterial regulatory proteins, tetR family NH456_02900 PF01817 Chorismate mutase type II NH456_02910 PF00106 short chain dehydrogenase NH456_02920 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NH456_02920 PF01433 Peptidase family M1 domain NH456_02920 PF11940 Domain of unknown function (DUF3458) Ig-like fold NH456_02935 PF02110 Hydroxyethylthiazole kinase family NH456_02940 PF06445 GyrI-like small molecule binding domain NH456_02950 PF14493 Helix-turn-helix domain NH456_02950 PF05970 PIF1-like helicase NH456_02955 PF00465 Iron-containing alcohol dehydrogenase NH456_02975 PF13520 Amino acid permease NH456_02980 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NH456_02985 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NH456_02990 PF00117 Glutamine amidotransferase class-I NH456_02990 PF00958 GMP synthase C terminal domain NH456_02990 PF02540 NAD synthase NH456_02995 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NH456_02995 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH456_03000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NH456_03015 PF00881 Nitroreductase family NH456_03025 PF17209 Hfq protein NH456_03035 PF08676 MutL C terminal dimerisation domain NH456_03035 PF01119 DNA mismatch repair protein, C-terminal domain NH456_03040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NH456_03045 PF01479 S4 domain NH456_03045 PF00849 RNA pseudouridylate synthase NH456_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_03075 PF03466 LysR substrate binding domain NH456_03090 PF07690 Major Facilitator Superfamily NH456_03095 PF00027 Cyclic nucleotide-binding domain NH456_03095 PF00520 Ion transport protein NH456_03105 PF06434 Aconitate hydratase 2 N-terminus NH456_03105 PF00330 Aconitase family (aconitate hydratase) NH456_03105 PF11791 Aconitate B N-terminal domain NH456_03120 PF17243 POTRA domain TamA domain 1 NH456_03120 PF07244 Surface antigen variable number repeat NH456_03120 PF01103 Surface antigen NH456_03130 PF03232 Ubiquinone biosynthesis protein COQ7 NH456_03140 PF00120 Glutamine synthetase, catalytic domain NH456_03145 PF00072 Response regulator receiver domain NH456_03145 PF00486 Transcriptional regulatory protein, C terminal NH456_03155 PF02669 K+-transporting ATPase, c chain NH456_03165 PF03814 Potassium-transporting ATPase A subunit NH456_03185 PF00899 ThiF family NH456_03190 PF01613 Flavin reductase like domain NH456_03195 PF13193 AMP-binding enzyme C-terminal domain NH456_03195 PF00501 AMP-binding enzyme NH456_03200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_03200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_03200 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_03205 PF00106 short chain dehydrogenase NH456_03210 PF12833 Helix-turn-helix domain NH456_03215 PF09084 NMT1/THI5 like NH456_03220 PF00528 Binding-protein-dependent transport system inner membrane component NH456_03225 PF13847 Methyltransferase domain NH456_03225 PF17827 PrmC N-terminal domain NH456_03230 PF03462 PCRF domain NH456_03230 PF00472 RF-1 domain NH456_03265 PF13994 PgaD-like protein NH456_03275 PF14883 Hypothetical glycosyl hydrolase family 13 NH456_03275 PF01522 Polysaccharide deacetylase NH456_03285 PF03618 Kinase/pyrophosphorylase NH456_03290 PF00391 PEP-utilising enzyme, mobile domain NH456_03290 PF02896 PEP-utilising enzyme, TIM barrel domain NH456_03290 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NH456_03300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NH456_03300 PF06481 COX Aromatic Rich Motif NH456_03305 PF00115 Cytochrome C and Quinol oxidase polypeptide I NH456_03310 PF00510 Cytochrome c oxidase subunit III NH456_03315 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NH456_03325 PF01250 Ribosomal protein S6 NH456_03330 PF01084 Ribosomal protein S18 NH456_03335 PF01281 Ribosomal protein L9, N-terminal domain NH456_03335 PF03948 Ribosomal protein L9, C-terminal domain NH456_03340 PF00772 DnaB-like helicase N terminal domain NH456_03340 PF03796 DnaB-like helicase C terminal domain NH456_03345 PF00842 Alanine racemase, C-terminal domain NH456_03345 PF01168 Alanine racemase, N-terminal domain NH456_03355 PF08379 Bacterial transglutaminase-like N-terminal region NH456_03355 PF01841 Transglutaminase-like superfamily NH456_03365 PF14403 Circularly permuted ATP-grasp type 2 NH456_03395 PF02954 Bacterial regulatory protein, Fis family NH456_03400 PF01808 AICARFT/IMPCHase bienzyme NH456_03400 PF02142 MGS-like domain NH456_03405 PF02843 Phosphoribosylglycinamide synthetase, C domain NH456_03405 PF02844 Phosphoribosylglycinamide synthetase, N domain NH456_03405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NH456_03410 PF03180 NLPA lipoprotein NH456_03415 PF09383 NIL domain NH456_03415 PF00005 ABC transporter NH456_03425 PF00753 Metallo-beta-lactamase superfamily NH456_03425 PF16123 Hydroxyacylglutathione hydrolase C-terminus NH456_03435 PF00375 Sodium:dicarboxylate symporter family NH456_03450 PF13610 DDE domain NH456_03475 PF13005 zinc-finger binding domain of transposase IS66 NH456_03475 PF13007 Transposase C of IS166 homeodomain NH456_03475 PF03050 Transposase IS66 family NH456_03475 PF13817 IS66 C-terminal element NH456_03485 PF01636 Phosphotransferase enzyme family NH456_03490 PF12848 ABC transporter NH456_03490 PF00005 ABC transporter NH456_03505 PF07091 Ribosomal RNA methyltransferase (FmrO) NH456_03520 PF00809 Pterin binding enzyme NH456_03525 PF00893 Small Multidrug Resistance protein NH456_03535 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_03550 PF13610 DDE domain NH456_03565 PF03466 LysR substrate binding domain NH456_03565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_03570 PF01810 LysE type translocator NH456_03580 PF13411 MerR HTH family regulatory protein NH456_03590 PF01494 FAD binding domain NH456_03595 PF01494 FAD binding domain NH456_03600 PF05195 Aminopeptidase P, N-terminal domain NH456_03600 PF00557 Metallopeptidase family M24 NH456_04010 PF01812 5-formyltetrahydrofolate cyclo-ligase family NH456_04015 PF00691 OmpA family NH456_04015 PF04355 SmpA / OmlA family NH456_04030 PF00004 ATPase family associated with various cellular activities (AAA) NH456_04030 PF05362 Lon protease (S16) C-terminal proteolytic domain NH456_04030 PF02190 ATP-dependent protease La (LON) substrate-binding domain NH456_04035 PF02590 Predicted SPOUT methyltransferase NH456_04050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NH456_04050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NH456_04055 PF04060 Putative Fe-S cluster NH456_04070 PF05191 Adenylate kinase, active site lid NH456_04085 PF00905 Penicillin binding protein transpeptidase domain NH456_04085 PF03717 Penicillin-binding Protein dimerisation domain NH456_04100 PF02492 CobW/HypB/UreG, nucleotide-binding domain NH456_04105 PF01730 UreF NH456_04110 PF05194 UreE urease accessory protein, C-terminal domain NH456_04110 PF02814 UreE urease accessory protein, N-terminal domain NH456_04115 PF00449 Urease alpha-subunit, N-terminal domain NH456_04115 PF01979 Amidohydrolase family NH456_04120 PF00699 Urease beta subunit NH456_04125 PF00547 Urease, gamma subunit NH456_04130 PF01774 UreD urease accessory protein NH456_04145 PF00463 Isocitrate lyase family NH456_04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_04150 PF03466 LysR substrate binding domain NH456_04155 PF00571 CBS domain NH456_04155 PF03471 Transporter associated domain NH456_04155 PF01595 Cyclin M transmembrane N-terminal domain NH456_04160 PF03600 Citrate transporter NH456_04175 PF00009 Elongation factor Tu GTP binding domain NH456_04180 PF01507 Phosphoadenosine phosphosulfate reductase family NH456_04190 PF14052 Capsule assembly protein Wzi NH456_04210 PF00301 Rubredoxin NH456_04215 PF18113 Rubredoxin binding C-terminal domain NH456_04215 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_04220 PF00561 alpha/beta hydrolase fold NH456_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_04225 PF03466 LysR substrate binding domain NH456_04235 PF02503 Polyphosphate kinase middle domain NH456_04235 PF13090 Polyphosphate kinase C-terminal domain 2 NH456_04235 PF17941 Polyphosphate kinase C-terminal domain 1 NH456_04235 PF13089 Polyphosphate kinase N-terminal domain NH456_04240 PF00912 Transglycosylase NH456_04245 PF01694 Rhomboid family NH456_04255 PF00005 ABC transporter NH456_04260 PF13472 GDSL-like Lipase/Acylhydrolase family NH456_04265 PF00484 Carbonic anhydrase NH456_04270 PF00561 alpha/beta hydrolase fold NH456_04285 PF01521 Iron-sulphur cluster biosynthesis NH456_04285 PF01106 NifU-like domain NH456_04295 PF00884 Sulfatase NH456_04300 PF03781 Sulfatase-modifying factor enzyme 1 NH456_04315 PF00291 Pyridoxal-phosphate dependent enzyme NH456_04320 PF01384 Phosphate transporter family NH456_04325 PF02310 B12 binding domain NH456_04325 PF02607 B12 binding domain NH456_04325 PF02965 Vitamin B12 dependent methionine synthase, activation domain NH456_04325 PF00809 Pterin binding enzyme NH456_04325 PF02574 Homocysteine S-methyltransferase NH456_04330 PF02779 Transketolase, pyrimidine binding domain NH456_04330 PF02780 Transketolase, C-terminal domain NH456_04335 PF00456 Transketolase, thiamine diphosphate binding domain NH456_04340 PF07690 Major Facilitator Superfamily NH456_04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_04350 PF03466 LysR substrate binding domain NH456_04360 PF01263 Aldose 1-epimerase NH456_04365 PF07690 Major Facilitator Superfamily NH456_04370 PF02311 AraC-like ligand binding domain NH456_04370 PF12833 Helix-turn-helix domain NH456_04380 PF01327 Polypeptide deformylase NH456_04385 PF07690 Major Facilitator Superfamily NH456_04400 PF00171 Aldehyde dehydrogenase family NH456_04405 PF01958 Domain of unknown function DUF108 NH456_04405 PF03447 Homoserine dehydrogenase, NAD binding domain NH456_04415 PF12697 Alpha/beta hydrolase family NH456_04425 PF07690 Major Facilitator Superfamily NH456_04435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH456_04445 PF00355 Rieske [2Fe-2S] domain NH456_04455 PF00355 Rieske [2Fe-2S] domain NH456_04460 PF09339 IclR helix-turn-helix domain NH456_04460 PF01614 Bacterial transcriptional regulator NH456_04475 PF00378 Enoyl-CoA hydratase/isomerase NH456_04485 PF00535 Glycosyl transferase family 2 NH456_04490 PF14883 Hypothetical glycosyl hydrolase family 13 NH456_04490 PF01522 Polysaccharide deacetylase NH456_04495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH456_04500 PF07152 YaeQ protein NH456_04505 PF00375 Sodium:dicarboxylate symporter family NH456_04520 PF03061 Thioesterase superfamily NH456_04530 PF02028 BCCT, betaine/carnitine/choline family transporter NH456_04535 PF02028 BCCT, betaine/carnitine/choline family transporter NH456_04540 PF00440 Bacterial regulatory proteins, tetR family NH456_04540 PF13977 BetI-type transcriptional repressor, C-terminal NH456_04545 PF00171 Aldehyde dehydrogenase family NH456_04550 PF05199 GMC oxidoreductase NH456_04550 PF00732 GMC oxidoreductase NH456_04555 PF06039 Malate:quinone oxidoreductase (Mqo) NH456_04565 PF02574 Homocysteine S-methyltransferase NH456_04570 PF13520 Amino acid permease NH456_04600 PF00083 Sugar (and other) transporter NH456_04645 PF00717 Peptidase S24-like NH456_04735 PF02767 DNA polymerase III beta subunit, central domain NH456_04735 PF02768 DNA polymerase III beta subunit, C-terminal domain NH456_04735 PF00712 DNA polymerase III beta subunit, N-terminal domain NH456_04780 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NH456_05015 PF01695 IstB-like ATP binding protein NH456_05025 PF01555 DNA methylase NH456_05055 PF01555 DNA methylase NH456_05060 PF00145 C-5 cytosine-specific DNA methylase NH456_05130 PF00929 Exonuclease NH456_05170 PF07690 Major Facilitator Superfamily NH456_05180 PF03061 Thioesterase superfamily NH456_05185 PF00490 Delta-aminolevulinic acid dehydratase NH456_05190 PF01266 FAD dependent oxidoreductase NH456_05195 PF08338 Domain of unknown function (DUF1731) NH456_05195 PF01370 NAD dependent epimerase/dehydratase family NH456_05215 PF00149 Calcineurin-like phosphoesterase NH456_05215 PF12320 Type 5 capsule protein repressor C-terminal domain NH456_05225 PF01168 Alanine racemase, N-terminal domain NH456_05230 PF00437 Type II/IV secretion system protein NH456_05240 PF01475 Ferric uptake regulator family NH456_05245 PF04355 SmpA / OmlA family NH456_05250 PF03658 RnfH family Ubiquitin NH456_05260 PF01814 Hemerythrin HHE cation binding domain NH456_05265 PF13230 Glutamine amidotransferases class-II NH456_05285 PF00692 dUTPase NH456_05295 PF00691 OmpA family NH456_05295 PF13488 Glycine zipper NH456_05300 PF01553 Acyltransferase NH456_05315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NH456_05320 PF03776 Septum formation topological specificity factor MinE NH456_05335 PF01810 LysE type translocator NH456_05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_05355 PF04377 Arginine-tRNA-protein transferase, C terminus NH456_05355 PF04376 Arginine-tRNA-protein transferase, N terminus NH456_05360 PF00583 Acetyltransferase (GNAT) family NH456_05380 PF00679 Elongation factor G C-terminus NH456_05380 PF14492 Elongation Factor G, domain II NH456_05380 PF03764 Elongation factor G, domain IV NH456_05380 PF00009 Elongation factor Tu GTP binding domain NH456_05380 PF03144 Elongation factor Tu domain 2 NH456_05385 PF00177 Ribosomal protein S7p/S5e NH456_05400 PF02801 Beta-ketoacyl synthase, C-terminal domain NH456_05400 PF00109 Beta-ketoacyl synthase, N-terminal domain NH456_05405 PF03653 Uncharacterised protein family (UPF0093) NH456_05410 PF05726 Pirin C-terminal cupin domain NH456_05410 PF02678 Pirin NH456_05420 PF00795 Carbon-nitrogen hydrolase NH456_05420 PF02540 NAD synthase NH456_05440 PF00171 Aldehyde dehydrogenase family NH456_05445 PF00355 Rieske [2Fe-2S] domain NH456_05445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH456_05450 PF07859 alpha/beta hydrolase fold NH456_05455 PF02028 BCCT, betaine/carnitine/choline family transporter NH456_05460 PF00180 Isocitrate/isopropylmalate dehydrogenase NH456_05485 PF00037 4Fe-4S binding domain NH456_05495 PF01668 SmpB protein NH456_05500 PF03358 NADPH-dependent FMN reductase NH456_05505 PF02578 Multi-copper polyphenol oxidoreductase laccase NH456_05510 PF01479 S4 domain NH456_05510 PF00849 RNA pseudouridylate synthase NH456_05515 PF13525 Outer membrane lipoprotein NH456_05520 PF10410 DnaB-helicase binding domain of primase NH456_05520 PF08278 DNA primase DnaG DnaB-binding NH456_05520 PF08275 DNA primase catalytic core, N-terminal domain NH456_05520 PF01807 CHC2 zinc finger NH456_05525 PF01488 Shikimate / quinate 5-dehydrogenase NH456_05525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NH456_05525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NH456_05535 PF03550 Outer membrane lipoprotein LolB NH456_05540 PF08544 GHMP kinases C terminal NH456_05540 PF00288 GHMP kinases N terminal domain NH456_05565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NH456_05565 PF14572 Phosphoribosyl synthetase-associated domain NH456_05570 PF01386 Ribosomal L25p family NH456_05575 PF01195 Peptidyl-tRNA hydrolase NH456_05580 PF02261 Aspartate decarboxylase NH456_05595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NH456_05605 PF03070 TENA/THI-4/PQQC family NH456_05605 PF02581 Thiamine monophosphate synthase NH456_05605 PF08543 Phosphomethylpyrimidine kinase NH456_05610 PF01476 LysM domain NH456_05610 PF04972 BON domain NH456_05615 PF00550 Phosphopantetheine attachment site NH456_05625 PF00698 Acyl transferase domain NH456_05630 PF01783 Ribosomal L32p protein family NH456_05635 PF02620 Large ribosomal RNA subunit accumulation protein YceD NH456_05640 PF04315 Elongation factor P hydroxylase NH456_05645 PF01300 Telomere recombination NH456_05650 PF02616 Segregation and condensation protein ScpA NH456_05655 PF04079 Segregation and condensation complex subunit ScpB NH456_05675 PF00155 Aminotransferase class I and II NH456_05680 PF04055 Radical SAM superfamily NH456_05680 PF06968 Biotin and Thiamin Synthesis associated domain NH456_05680 PF00202 Aminotransferase class-III NH456_05690 PF02358 Trehalose-phosphatase NH456_05695 PF00982 Glycosyltransferase family 20 NH456_05700 PF07690 Major Facilitator Superfamily NH456_05705 PF00210 Ferritin-like domain NH456_05710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NH456_05710 PF01653 NAD-dependent DNA ligase adenylation domain NH456_05710 PF00533 BRCA1 C Terminus (BRCT) domain NH456_05710 PF12826 Helix-hairpin-helix motif NH456_05710 PF03120 NAD-dependent DNA ligase OB-fold domain NH456_05720 PF02463 RecF/RecN/SMC N terminal domain NH456_05720 PF06470 SMC proteins Flexible Hinge Domain NH456_05730 PF01925 Sulfite exporter TauE/SafE NH456_05740 PF03309 Type III pantothenate kinase NH456_05755 PF01207 Dihydrouridine synthase (Dus) NH456_05785 PF00692 dUTPase NH456_05800 PF01048 Phosphorylase superfamily NH456_05805 PF10609 NUBPL iron-transfer P-loop NTPase NH456_05815 PF01588 Putative tRNA binding domain NH456_05815 PF09334 tRNA synthetases class I (M) NH456_05845 PF00291 Pyridoxal-phosphate dependent enzyme NH456_05860 PF05552 Conserved TM helix NH456_05875 PF00970 Oxidoreductase FAD-binding domain NH456_05875 PF00175 Oxidoreductase NAD-binding domain NH456_05885 PF00313 'Cold-shock' DNA-binding domain NH456_05900 PF00361 Proton-conducting membrane transporter NH456_05910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NH456_05920 PF12838 4Fe-4S dicluster domain NH456_05925 PF00146 NADH dehydrogenase NH456_05930 PF00384 Molybdopterin oxidoreductase NH456_05930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NH456_05930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NH456_05935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NH456_05935 PF10531 SLBB domain NH456_05935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NH456_05945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NH456_05945 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NH456_05950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NH456_05955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NH456_05960 PF17151 Periplasmic sensor domain NH456_05960 PF00990 Diguanylate cyclase, GGDEF domain NH456_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_05970 PF00512 His Kinase A (phospho-acceptor) domain NH456_05970 PF00672 HAMP domain NH456_05975 PF00072 Response regulator receiver domain NH456_05975 PF00486 Transcriptional regulatory protein, C terminal NH456_05985 PF02867 Ribonucleotide reductase, barrel domain NH456_05985 PF00317 Ribonucleotide reductase, all-alpha domain NH456_05985 PF03477 ATP cone domain NH456_05995 PF00268 Ribonucleotide reductase, small chain NH456_06005 PF00672 HAMP domain NH456_06005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_06005 PF00512 His Kinase A (phospho-acceptor) domain NH456_06005 PF13755 Sensor N-terminal transmembrane domain NH456_06005 PF13756 Stimulus-sensing domain NH456_06105 PF02567 Phenazine biosynthesis-like protein NH456_06130 PF01613 Flavin reductase like domain NH456_06135 PF01717 Cobalamin-independent synthase, Catalytic domain NH456_06135 PF08267 Cobalamin-independent synthase, N-terminal domain NH456_06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_06145 PF03466 LysR substrate binding domain NH456_06150 PF01810 LysE type translocator NH456_06160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH456_06160 PF12833 Helix-turn-helix domain NH456_06165 PF07687 Peptidase dimerisation domain NH456_06165 PF01546 Peptidase family M20/M25/M40 NH456_06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_06175 PF03466 LysR substrate binding domain NH456_06180 PF07690 Major Facilitator Superfamily NH456_06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_06190 PF03466 LysR substrate binding domain NH456_06195 PF00890 FAD binding domain NH456_06195 PF14537 Cytochrome c3 NH456_06205 PF02515 CoA-transferase family III NH456_06210 PF07690 Major Facilitator Superfamily NH456_06215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_06215 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_06215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_06220 PF03466 LysR substrate binding domain NH456_06225 PF00107 Zinc-binding dehydrogenase NH456_06225 PF08240 Alcohol dehydrogenase GroES-like domain NH456_06230 PF00962 Adenosine/AMP deaminase NH456_06260 PF01960 ArgJ family NH456_06270 PF00893 Small Multidrug Resistance protein NH456_06285 PF07732 Multicopper oxidase NH456_06285 PF07731 Multicopper oxidase NH456_06285 PF00394 Multicopper oxidase NH456_06300 PF00834 Ribulose-phosphate 3 epimerase family NH456_06310 PF00756 Putative esterase NH456_06320 PF04445 Putative SAM-dependent methyltransferase NH456_06325 PF00814 Glycoprotease family NH456_06330 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_06335 PF00293 NUDIX domain NH456_06375 PF00425 chorismate binding enzyme NH456_06375 PF04715 Anthranilate synthase component I, N terminal region NH456_06380 PF00155 Aminotransferase class I and II NH456_06385 PF00815 Histidinol dehydrogenase NH456_06390 PF01634 ATP phosphoribosyltransferase NH456_06395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NH456_06400 PF01722 BolA-like protein NH456_06405 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NH456_06410 PF04552 Sigma-54, DNA binding domain NH456_06410 PF00309 Sigma-54 factor, Activator interacting domain (AID) NH456_06410 PF04963 Sigma-54 factor, core binding domain NH456_06455 PF00795 Carbon-nitrogen hydrolase NH456_06465 PF01047 MarR family NH456_06470 PF02566 OsmC-like protein NH456_06500 PF02325 YGGT family NH456_06505 PF03807 NADP oxidoreductase coenzyme F420-dependent NH456_06505 PF14748 Pyrroline-5-carboxylate reductase dimerisation NH456_06510 PF01171 PP-loop family NH456_06510 PF09179 TilS substrate binding domain NH456_06510 PF11734 TilS substrate C-terminal domain NH456_06515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NH456_06520 PF02541 Ppx/GppA phosphatase family NH456_06525 PF00085 Thioredoxin NH456_06530 PF07498 Rho termination factor, N-terminal domain NH456_06530 PF07497 Rho termination factor, RNA-binding domain NH456_06530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH456_06545 PF00216 Bacterial DNA-binding protein NH456_06550 PF03483 B3/4 domain NH456_06550 PF03147 Ferredoxin-fold anticodon binding domain NH456_06550 PF01588 Putative tRNA binding domain NH456_06550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NH456_06550 PF03484 tRNA synthetase B5 domain NH456_06555 PF01409 tRNA synthetases class II core domain (F) NH456_06555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NH456_06575 PF00453 Ribosomal protein L20 NH456_06580 PF01632 Ribosomal protein L35 NH456_06590 PF07690 Major Facilitator Superfamily NH456_06595 PF09335 SNARE associated Golgi protein NH456_06600 PF00043 Glutathione S-transferase, C-terminal domain NH456_06600 PF02798 Glutathione S-transferase, N-terminal domain NH456_06605 PF05198 Translation initiation factor IF-3, N-terminal domain NH456_06605 PF00707 Translation initiation factor IF-3, C-terminal domain NH456_06610 PF02824 TGS domain NH456_06610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH456_06610 PF03129 Anticodon binding domain NH456_06610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NH456_06615 PF00501 AMP-binding enzyme NH456_06615 PF13193 AMP-binding enzyme C-terminal domain NH456_06620 PF04751 Protein of unknown function (DUF615) NH456_06625 PF00381 PTS HPr component phosphorylation site NH456_06630 PF03668 P-loop ATPase protein family NH456_06635 PF02569 Pantoate-beta-alanine ligase NH456_06640 PF02548 Ketopantoate hydroxymethyltransferase NH456_06645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NH456_06660 PF03819 MazG nucleotide pyrophosphohydrolase domain NH456_06670 PF02824 TGS domain NH456_06670 PF13291 ACT domain NH456_06670 PF04607 Region found in RelA / SpoT proteins NH456_06675 PF05958 tRNA (Uracil-5-)-methyltransferase NH456_06685 PF00291 Pyridoxal-phosphate dependent enzyme NH456_06695 PF00378 Enoyl-CoA hydratase/isomerase NH456_06705 PF01261 Xylose isomerase-like TIM barrel NH456_06715 PF00106 short chain dehydrogenase NH456_06720 PF02233 NAD(P) transhydrogenase beta subunit NH456_06725 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NH456_06735 PF00892 EamA-like transporter family NH456_06745 PF07690 Major Facilitator Superfamily NH456_06760 PF03466 LysR substrate binding domain NH456_06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_06770 PF00899 ThiF family NH456_06800 PF03144 Elongation factor Tu domain 2 NH456_06800 PF16658 Class II release factor RF3, C-terminal domain NH456_06800 PF00009 Elongation factor Tu GTP binding domain NH456_06825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NH456_06825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NH456_06830 PF10369 Small subunit of acetolactate synthase NH456_06845 PF08264 Anticodon-binding domain of tRNA NH456_06845 PF00133 tRNA synthetases class I (I, L, M and V) NH456_06845 PF13603 Leucyl-tRNA synthetase, Domain 2 NH456_06845 PF09334 tRNA synthetases class I (M) NH456_06870 PF02321 Outer membrane efflux protein NH456_06885 PF00929 Exonuclease NH456_06890 PF03193 RsgA GTPase NH456_06900 PF00462 Glutaredoxin NH456_06905 PF02556 Preprotein translocase subunit SecB NH456_06920 PF00109 Beta-ketoacyl synthase, N-terminal domain NH456_06920 PF02801 Beta-ketoacyl synthase, C-terminal domain NH456_06935 PF00109 Beta-ketoacyl synthase, N-terminal domain NH456_06935 PF02801 Beta-ketoacyl synthase, C-terminal domain NH456_06965 PF00221 Aromatic amino acid lyase NH456_06980 PF00501 AMP-binding enzyme NH456_06980 PF13193 AMP-binding enzyme C-terminal domain NH456_06990 PF00550 Phosphopantetheine attachment site NH456_06995 PF00550 Phosphopantetheine attachment site NH456_07010 PF01926 50S ribosome-binding GTPase NH456_07010 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NH456_07015 PF13360 PQQ-like domain NH456_07025 PF13393 Histidyl-tRNA synthetase NH456_07025 PF03129 Anticodon binding domain NH456_07030 PF04551 GcpE protein NH456_07045 PF04055 Radical SAM superfamily NH456_07050 PF00334 Nucleoside diphosphate kinase NH456_07055 PF04384 Iron-sulphur cluster assembly NH456_07065 PF13439 Glycosyltransferase Family 4 NH456_07065 PF00534 Glycosyl transferases group 1 NH456_07075 PF00933 Glycosyl hydrolase family 3 N terminal domain NH456_07090 PF00171 Aldehyde dehydrogenase family NH456_07095 PF00171 Aldehyde dehydrogenase family NH456_07100 PF01202 Shikimate kinase NH456_07105 PF02447 GntP family permease NH456_07110 PF01081 KDPG and KHG aldolase NH456_07115 PF00920 Dehydratase family NH456_07120 PF00871 Acetokinase family NH456_07125 PF07085 DRTGG domain NH456_07125 PF01515 Phosphate acetyl/butaryl transferase NH456_07145 PF07724 AAA domain (Cdc48 subfamily) NH456_07145 PF10431 C-terminal, D2-small domain, of ClpB protein NH456_07145 PF06689 ClpX C4-type zinc finger NH456_07150 PF00574 Clp protease NH456_07155 PF05698 Bacterial trigger factor protein (TF) C-terminus NH456_07155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH456_07155 PF05697 Bacterial trigger factor protein (TF) NH456_07165 PF18331 PKHD-type hydroxylase C-terminal domain NH456_07165 PF13640 2OG-Fe(II) oxygenase superfamily NH456_07180 PF00561 alpha/beta hydrolase fold NH456_07180 PF07021 Methionine biosynthesis protein MetW NH456_07190 PF01725 Ham1 family NH456_07200 PF02416 mttA/Hcf106 family NH456_07205 PF02416 mttA/Hcf106 family NH456_07230 PF01790 Prolipoprotein diacylglyceryl transferase NH456_07250 PF00186 Dihydrofolate reductase NH456_07260 PF01625 Peptide methionine sulfoxide reductase NH456_07270 PF01618 MotA/TolQ/ExbB proton channel family NH456_07280 PF01842 ACT domain NH456_07280 PF00551 Formyl transferase NH456_07295 PF00830 Ribosomal L28 family NH456_07300 PF00471 Ribosomal protein L33 NH456_07305 PF00999 Sodium/hydrogen exchanger family NH456_07305 PF02254 TrkA-N domain NH456_07325 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NH456_07330 PF00580 UvrD/REP helicase N-terminal domain NH456_07330 PF13361 UvrD-like helicase C-terminal domain NH456_07345 PF01131 DNA topoisomerase NH456_07345 PF08272 Topoisomerase I zinc-ribbon-like NH456_07345 PF01751 Toprim domain NH456_07345 PF01396 Topoisomerase DNA binding C4 zinc finger NH456_07355 PF01638 HxlR-like helix-turn-helix NH456_07360 PF08240 Alcohol dehydrogenase GroES-like domain NH456_07360 PF00107 Zinc-binding dehydrogenase NH456_07365 PF04102 SlyX NH456_07370 PF00005 ABC transporter NH456_07370 PF16326 ABC transporter C-terminal domain NH456_07370 PF12848 ABC transporter NH456_07375 PF01810 LysE type translocator NH456_07380 PF03279 Bacterial lipid A biosynthesis acyltransferase NH456_07400 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH456_07400 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH456_07420 PF01416 tRNA pseudouridine synthase NH456_07430 PF01176 Translation initiation factor 1A / IF-1 NH456_07445 PF00180 Isocitrate/isopropylmalate dehydrogenase NH456_07460 PF00330 Aconitase family (aconitate hydratase) NH456_07470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_07470 PF03466 LysR substrate binding domain NH456_07495 PF01590 GAF domain NH456_07495 PF05524 PEP-utilising enzyme, N-terminal NH456_07495 PF00391 PEP-utilising enzyme, mobile domain NH456_07495 PF02896 PEP-utilising enzyme, TIM barrel domain NH456_07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_07510 PF03466 LysR substrate binding domain NH456_07520 PF02798 Glutathione S-transferase, N-terminal domain NH456_07525 PF08279 HTH domain NH456_07525 PF13280 WYL domain NH456_07530 PF13419 Haloacid dehalogenase-like hydrolase NH456_07535 PF01479 S4 domain NH456_07535 PF00849 RNA pseudouridylate synthase NH456_07540 PF00575 S1 RNA binding domain NH456_07540 PF10150 Ribonuclease E/G family NH456_07540 PF12111 Polyribonucleotide phosphorylase C terminal NH456_07545 PF13193 AMP-binding enzyme C-terminal domain NH456_07545 PF00501 AMP-binding enzyme NH456_07560 PF03466 LysR substrate binding domain NH456_07560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_07565 PF00106 short chain dehydrogenase NH456_07570 PF06969 HemN C-terminal domain NH456_07570 PF04055 Radical SAM superfamily NH456_07580 PF01554 MatE NH456_07585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH456_07585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_07585 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_07590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH456_07590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_07595 PF03109 ABC1 family NH456_07600 PF01197 Ribosomal protein L31 NH456_07615 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NH456_07635 PF03884 DNA gyrase inhibitor YacG NH456_07640 PF00753 Metallo-beta-lactamase superfamily NH456_07645 PF00762 Ferrochelatase NH456_07655 PF01177 Asp/Glu/Hydantoin racemase NH456_07670 PF01206 Sulfurtransferase TusA NH456_07675 PF00571 CBS domain NH456_07675 PF03471 Transporter associated domain NH456_07680 PF00795 Carbon-nitrogen hydrolase NH456_07685 PF01588 Putative tRNA binding domain NH456_07690 PF13737 Transposase DDE domain NH456_07700 PF08334 Type II secretion system (T2SS), protein G NH456_07700 PF07963 Prokaryotic N-terminal methylation motif NH456_07705 PF00482 Type II secretion system (T2SS), protein F NH456_07710 PF00270 DEAD/DEAH box helicase NH456_07710 PF00271 Helicase conserved C-terminal domain NH456_07710 PF17764 3′ DNA-binding domain (3′BD) NH456_07710 PF18074 Primosomal protein N C-terminal domain NH456_07710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NH456_07720 PF01430 Hsp33 protein NH456_07740 PF01544 CorA-like Mg2+ transporter protein NH456_07750 PF00312 Ribosomal protein S15 NH456_07755 PF00144 Beta-lactamase NH456_07780 PF03976 Polyphosphate kinase 2 (PPK2) NH456_07790 PF01209 ubiE/COQ5 methyltransferase family NH456_07805 PF01494 FAD binding domain NH456_07810 PF01502 Phosphoribosyl-AMP cyclohydrolase NH456_07830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NH456_07840 PF01899 Na+/H+ ion antiporter subunit NH456_07845 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NH456_07850 PF03334 Na+/H+ antiporter subunit NH456_07855 PF02033 Ribosome-binding factor A NH456_07870 PF02576 RimP N-terminal domain NH456_07870 PF17384 RimP C-terminal SH3 domain NH456_07890 PF03840 Preprotein translocase SecG subunit NH456_07895 PF00121 Triosephosphate isomerase NH456_07900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NH456_07900 PF00437 Type II/IV secretion system protein NH456_07905 PF00482 Type II secretion system (T2SS), protein F NH456_07915 PF06750 Bacterial Peptidase A24 N-terminal domain NH456_07915 PF01478 Type IV leader peptidase family NH456_07920 PF01121 Dephospho-CoA kinase NH456_07930 PF08032 RNA 2'-O ribose methyltransferase substrate binding NH456_07930 PF00588 SpoU rRNA Methylase family NH456_07935 PF06865 Pyrimidine/purine nucleoside phosphorylase NH456_07945 PF02463 RecF/RecN/SMC N terminal domain NH456_07960 PF13533 Biotin-lipoyl like NH456_07990 PF01066 CDP-alcohol phosphatidyltransferase NH456_08000 PF01541 GIY-YIG catalytic domain NH456_08000 PF02151 UvrB/uvrC motif NH456_08000 PF08459 UvrC Helix-hairpin-helix N-terminal NH456_08020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH456_08020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH456_08020 PF00378 Enoyl-CoA hydratase/isomerase NH456_08045 PF00376 MerR family regulatory protein NH456_08045 PF09278 MerR, DNA binding NH456_08055 PF01323 DSBA-like thioredoxin domain NH456_08070 PF00183 Hsp90 protein NH456_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_08085 PF03553 Na+/H+ antiporter family NH456_08085 PF13726 Na+-H+ antiporter family NH456_08090 PF00561 alpha/beta hydrolase fold NH456_08115 PF04563 RNA polymerase beta subunit NH456_08115 PF10385 RNA polymerase beta subunit external 1 domain NH456_08115 PF04565 RNA polymerase Rpb2, domain 3 NH456_08115 PF00562 RNA polymerase Rpb2, domain 6 NH456_08115 PF04560 RNA polymerase Rpb2, domain 7 NH456_08115 PF04561 RNA polymerase Rpb2, domain 2 NH456_08120 PF16320 Ribosomal protein L7/L12 dimerisation domain NH456_08120 PF00542 Ribosomal protein L7/L12 C-terminal domain NH456_08125 PF00466 Ribosomal protein L10 NH456_08130 PF00687 Ribosomal protein L1p/L10e family NH456_08135 PF03946 Ribosomal protein L11, N-terminal domain NH456_08135 PF00298 Ribosomal protein L11, RNA binding domain NH456_08140 PF02357 Transcription termination factor nusG NH456_08140 PF00467 KOW motif NH456_08145 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NH456_08180 PF04715 Anthranilate synthase component I, N terminal region NH456_08180 PF00425 chorismate binding enzyme NH456_08185 PF13419 Haloacid dehalogenase-like hydrolase NH456_08190 PF12401 Protein of unknown function (DUF2662) NH456_08190 PF00498 FHA domain NH456_08195 PF03958 Bacterial type II/III secretion system short domain NH456_08195 PF00263 Bacterial type II and III secretion system protein NH456_08210 PF00816 H-NS histone family NH456_08235 PF03900 Porphobilinogen deaminase, C-terminal domain NH456_08235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NH456_08240 PF04397 LytTr DNA-binding domain NH456_08240 PF00072 Response regulator receiver domain NH456_08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_08245 PF07694 5TMR of 5TMR-LYT NH456_08245 PF06580 Histidine kinase NH456_08255 PF04362 Bacterial Fe(2+) trafficking NH456_08265 PF02321 Outer membrane efflux protein NH456_08270 PF00892 EamA-like transporter family NH456_08285 PF01964 Radical SAM ThiC family NH456_08285 PF13667 ThiC-associated domain NH456_08290 PF00293 NUDIX domain NH456_08295 PF00149 Calcineurin-like phosphoesterase NH456_08300 PF01258 Prokaryotic dksA/traR C4-type zinc finger NH456_08305 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH456_08310 PF01098 Cell cycle protein NH456_08315 PF02875 Mur ligase family, glutamate ligase domain NH456_08315 PF08245 Mur ligase middle domain NH456_08325 PF07664 Ferrous iron transport protein B C terminus NH456_08325 PF02421 Ferrous iron transport protein B NH456_08325 PF07670 Nucleoside recognition NH456_08335 PF02899 Phage integrase, N-terminal SAM-like domain NH456_08335 PF00589 Phage integrase family NH456_08340 PF13098 Thioredoxin-like domain NH456_08340 PF10411 Disulfide bond isomerase protein N-terminus NH456_08345 PF01842 ACT domain NH456_08345 PF00742 Homoserine dehydrogenase NH456_08345 PF03447 Homoserine dehydrogenase, NAD binding domain NH456_08355 PF00768 D-alanyl-D-alanine carboxypeptidase NH456_08360 PF00196 Bacterial regulatory proteins, luxR family NH456_08360 PF00072 Response regulator receiver domain NH456_08365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_08365 PF00512 His Kinase A (phospho-acceptor) domain NH456_08370 PF00072 Response regulator receiver domain NH456_08370 PF02954 Bacterial regulatory protein, Fis family NH456_08370 PF00158 Sigma-54 interaction domain NH456_08375 PF03572 Peptidase family S41 NH456_08375 PF00595 PDZ domain NH456_08385 PF03739 Lipopolysaccharide export system permease LptF/LptG NH456_08415 PF00677 Lumazine binding domain NH456_08425 PF01872 RibD C-terminal domain NH456_08425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH456_08430 PF03477 ATP cone domain NH456_08435 PF00909 Ammonium Transporter Family NH456_08440 PF00543 Nitrogen regulatory protein P-II NH456_08460 PF01636 Phosphotransferase enzyme family NH456_08465 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NH456_08485 PF00440 Bacterial regulatory proteins, tetR family NH456_08485 PF02909 Tetracyclin repressor-like, C-terminal domain NH456_08490 PF07690 Major Facilitator Superfamily NH456_08520 PF00905 Penicillin binding protein transpeptidase domain NH456_08530 PF00916 Sulfate permease family NH456_08530 PF01740 STAS domain NH456_08535 PF00582 Universal stress protein family NH456_08575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH456_08575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH456_08575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH456_08575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH456_08580 PF00809 Pterin binding enzyme NH456_08595 PF00665 Integrase core domain NH456_08620 PF00589 Phage integrase family NH456_08620 PF02899 Phage integrase, N-terminal SAM-like domain NH456_08705 PF00665 Integrase core domain NH456_08720 PF00155 Aminotransferase class I and II NH456_08720 PF00392 Bacterial regulatory proteins, gntR family NH456_08745 PF03573 outer membrane porin, OprD family NH456_08750 PF00719 Inorganic pyrophosphatase NH456_08765 PF00501 AMP-binding enzyme NH456_08765 PF13193 AMP-binding enzyme C-terminal domain NH456_08775 PF07690 Major Facilitator Superfamily NH456_08780 PF03458 UPF0126 domain NH456_08785 PF02810 SEC-C motif NH456_08795 PF03641 Possible lysine decarboxylase NH456_08800 PF07690 Major Facilitator Superfamily NH456_08810 PF11799 impB/mucB/samB family C-terminal domain NH456_08810 PF11798 IMS family HHH motif NH456_08810 PF00817 impB/mucB/samB family NH456_08860 PF00291 Pyridoxal-phosphate dependent enzyme NH456_08920 PF01327 Polypeptide deformylase NH456_08930 PF02481 DNA recombination-mediator protein A NH456_08930 PF17782 DprA winged helix domain NH456_08935 PF01300 Telomere recombination NH456_08940 PF00892 EamA-like transporter family NH456_08945 PF00440 Bacterial regulatory proteins, tetR family NH456_08950 PF07690 Major Facilitator Superfamily NH456_08960 PF00255 Glutathione peroxidase NH456_08970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NH456_08975 PF02874 ATP synthase alpha/beta family, beta-barrel domain NH456_08975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH456_08980 PF00231 ATP synthase NH456_08990 PF00213 ATP synthase delta (OSCP) subunit NH456_08995 PF00430 ATP synthase B/B' CF(0) NH456_09000 PF00137 ATP synthase subunit C NH456_09030 PF00950 ABC 3 transport family NH456_09035 PF01810 LysE type translocator NH456_09040 PF04261 Dyp-type peroxidase family NH456_09050 PF03949 Malic enzyme, NAD binding domain NH456_09050 PF00390 Malic enzyme, N-terminal domain NH456_09055 PF05746 DALR anticodon binding domain NH456_09055 PF03485 Arginyl tRNA synthetase N terminal domain NH456_09055 PF00750 tRNA synthetases class I (R) NH456_09075 PF02678 Pirin NH456_09075 PF05726 Pirin C-terminal cupin domain NH456_09085 PF03551 Transcriptional regulator PadR-like family NH456_09090 PF13427 Domain of unknown function (DUF4111) NH456_09090 PF01909 Nucleotidyltransferase domain NH456_09095 PF00958 GMP synthase C terminal domain NH456_09095 PF02540 NAD synthase NH456_09095 PF00117 Glutamine amidotransferase class-I NH456_09100 PF04286 Protein of unknown function (DUF445) NH456_09105 PF07681 DoxX NH456_09110 PF09335 SNARE associated Golgi protein NH456_09135 PF01722 BolA-like protein NH456_09150 PF01648 4'-phosphopantetheinyl transferase superfamily NH456_09155 PF12697 Alpha/beta hydrolase family NH456_09175 PF08242 Methyltransferase domain NH456_09175 PF16197 Ketoacyl-synthetase C-terminal extension NH456_09175 PF00109 Beta-ketoacyl synthase, N-terminal domain NH456_09175 PF02801 Beta-ketoacyl synthase, C-terminal domain NH456_09175 PF14765 Polyketide synthase dehydratase NH456_09175 PF00550 Phosphopantetheine attachment site NH456_09175 PF00975 Thioesterase domain NH456_09180 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_09180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_09180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_09185 PF00501 AMP-binding enzyme NH456_09190 PF03472 Autoinducer binding domain NH456_09190 PF00196 Bacterial regulatory proteins, luxR family NH456_09200 PF00765 Autoinducer synthase NH456_09210 PF00378 Enoyl-CoA hydratase/isomerase NH456_09215 PF00378 Enoyl-CoA hydratase/isomerase NH456_09230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH456_09230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH456_09235 PF00171 Aldehyde dehydrogenase family NH456_09245 PF00324 Amino acid permease NH456_09250 PF00324 Amino acid permease NH456_09260 PF01042 Endoribonuclease L-PSP NH456_09265 PF01168 Alanine racemase, N-terminal domain NH456_09265 PF00842 Alanine racemase, C-terminal domain NH456_09270 PF01266 FAD dependent oxidoreductase NH456_09275 PF01037 Lrp/AsnC ligand binding domain NH456_09285 PF07715 TonB-dependent Receptor Plug Domain NH456_09285 PF00593 TonB dependent receptor NH456_09300 PF00849 RNA pseudouridylate synthase NH456_09310 PF00106 short chain dehydrogenase NH456_09350 PF13737 Transposase DDE domain NH456_09370 PF00285 Citrate synthase, C-terminal domain NH456_09380 PF00392 Bacterial regulatory proteins, gntR family NH456_09380 PF07729 FCD domain NH456_09390 PF00155 Aminotransferase class I and II NH456_09395 PF09330 D-lactate dehydrogenase, membrane binding NH456_09395 PF01565 FAD binding domain NH456_09400 PF01070 FMN-dependent dehydrogenase NH456_09405 PF00392 Bacterial regulatory proteins, gntR family NH456_09405 PF07729 FCD domain NH456_09410 PF02652 L-lactate permease NH456_09425 PF16363 GDP-mannose 4,6 dehydratase NH456_09430 PF00342 Phosphoglucose isomerase NH456_09445 PF02397 Bacterial sugar transferase NH456_09450 PF13477 Glycosyl transferase 4-like NH456_09450 PF00534 Glycosyl transferases group 1 NH456_09455 PF13439 Glycosyltransferase Family 4 NH456_09455 PF00534 Glycosyl transferases group 1 NH456_09470 PF00535 Glycosyl transferase family 2 NH456_09480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NH456_09480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NH456_09480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NH456_09490 PF01451 Low molecular weight phosphotyrosine protein phosphatase NH456_09500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH456_09500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NH456_09515 PF01510 N-acetylmuramoyl-L-alanine amidase NH456_09535 PF03725 3' exoribonuclease family, domain 2 NH456_09535 PF01138 3' exoribonuclease family, domain 1 NH456_09540 PF00487 Fatty acid desaturase NH456_09545 PF00175 Oxidoreductase NAD-binding domain NH456_09550 PF00440 Bacterial regulatory proteins, tetR family NH456_09555 PF08360 QacR-like protein, C-terminal region NH456_09555 PF00440 Bacterial regulatory proteins, tetR family NH456_09560 PF01323 DSBA-like thioredoxin domain NH456_09570 PF13419 Haloacid dehalogenase-like hydrolase NH456_09590 PF00696 Amino acid kinase family NH456_09590 PF00583 Acetyltransferase (GNAT) family NH456_09600 PF09084 NMT1/THI5 like NH456_09605 PF00296 Luciferase-like monooxygenase NH456_09610 PF00528 Binding-protein-dependent transport system inner membrane component NH456_09615 PF00005 ABC transporter NH456_09620 PF08362 YcdC-like protein, C-terminal region NH456_09620 PF00440 Bacterial regulatory proteins, tetR family NH456_09635 PF06574 FAD synthetase NH456_09635 PF01687 Riboflavin kinase NH456_09640 PF06827 Zinc finger found in FPG and IleRS NH456_09640 PF08264 Anticodon-binding domain of tRNA NH456_09640 PF00133 tRNA synthetases class I (I, L, M and V) NH456_09645 PF01252 Signal peptidase (SPase) II NH456_09650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH456_09690 PF00579 tRNA synthetases class I (W and Y) NH456_09695 PF03702 Anhydro-N-acetylmuramic acid kinase NH456_09700 PF00561 alpha/beta hydrolase fold NH456_09705 PF01521 Iron-sulphur cluster biosynthesis NH456_09725 PF00005 ABC transporter NH456_09725 PF12848 ABC transporter NH456_09730 PF09335 SNARE associated Golgi protein NH456_09750 PF00712 DNA polymerase III beta subunit, N-terminal domain NH456_09750 PF02767 DNA polymerase III beta subunit, central domain NH456_09750 PF02768 DNA polymerase III beta subunit, C-terminal domain NH456_09755 PF00308 Bacterial dnaA protein NH456_09755 PF11638 DnaA N-terminal domain NH456_09755 PF08299 Bacterial dnaA protein helix-turn-helix NH456_09760 PF00468 Ribosomal protein L34 NH456_09765 PF00825 Ribonuclease P NH456_09770 PF01809 Putative membrane protein insertion efficiency factor NH456_09775 PF14849 YidC periplasmic domain NH456_09775 PF02096 60Kd inner membrane protein NH456_09785 PF02583 Metal-sensitive transcriptional repressor NH456_09790 PF16916 Dimerisation domain of Zinc Transporter NH456_09790 PF01545 Cation efflux family NH456_09795 PF13098 Thioredoxin-like domain NH456_09795 PF10411 Disulfide bond isomerase protein N-terminus NH456_09805 PF00156 Phosphoribosyl transferase domain NH456_09810 PF01979 Amidohydrolase family NH456_09835 PF01569 PAP2 superfamily NH456_09845 PF01225 Mur ligase family, catalytic domain NH456_09845 PF08245 Mur ligase middle domain NH456_09845 PF02875 Mur ligase family, glutamate ligase domain NH456_09855 PF00731 AIR carboxylase NH456_09860 PF02222 ATP-grasp domain NH456_09860 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NH456_09865 PF13406 Transglycosylase SLT domain NH456_09890 PF01025 GrpE NH456_09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_09895 PF03466 LysR substrate binding domain NH456_09915 PF07859 alpha/beta hydrolase fold NH456_09920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NH456_09960 PF00209 Sodium:neurotransmitter symporter family NH456_09975 PF00551 Formyl transferase NH456_09975 PF02911 Formyl transferase, C-terminal domain NH456_09980 PF00920 Dehydratase family NH456_09995 PF03466 LysR substrate binding domain NH456_09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_10000 PF00860 Permease family NH456_10015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH456_10020 PF00873 AcrB/AcrD/AcrF family NH456_10030 PF00684 DnaJ central domain NH456_10030 PF00226 DnaJ domain NH456_10030 PF01556 DnaJ C terminal domain NH456_10040 PF05173 Dihydrodipicolinate reductase, C-terminus NH456_10040 PF01113 Dihydrodipicolinate reductase, N-terminus NH456_10055 PF00248 Aldo/keto reductase family NH456_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_10060 PF03466 LysR substrate binding domain NH456_10075 PF00155 Aminotransferase class I and II NH456_10075 PF00392 Bacterial regulatory proteins, gntR family NH456_10080 PF08240 Alcohol dehydrogenase GroES-like domain NH456_10080 PF00107 Zinc-binding dehydrogenase NH456_10085 PF03352 Methyladenine glycosylase NH456_10115 PF07043 Protein of unknown function (DUF1328) NH456_10120 PF03692 Putative zinc- or iron-chelating domain NH456_10125 PF07995 Glucose / Sorbosone dehydrogenase NH456_10130 PF00004 ATPase family associated with various cellular activities (AAA) NH456_10130 PF16193 AAA C-terminal domain NH456_10130 PF12002 MgsA AAA+ ATPase C terminal NH456_10135 PF01226 Formate/nitrite transporter NH456_10145 PF01259 SAICAR synthetase NH456_10155 PF00701 Dihydrodipicolinate synthetase family NH456_10160 PF00857 Isochorismatase family NH456_10165 PF01758 Sodium Bile acid symporter family NH456_10170 PF01554 MatE NH456_10175 PF04463 Protein of unknown function (DUF523) NH456_10190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH456_10195 PF14497 Glutathione S-transferase, C-terminal domain NH456_10195 PF02798 Glutathione S-transferase, N-terminal domain NH456_10205 PF00324 Amino acid permease NH456_10215 PF07683 Cobalamin synthesis protein cobW C-terminal domain NH456_10215 PF02492 CobW/HypB/UreG, nucleotide-binding domain NH456_10225 PF07702 UTRA domain NH456_10225 PF00392 Bacterial regulatory proteins, gntR family NH456_10230 PF05962 HutD NH456_10240 PF00221 Aromatic amino acid lyase NH456_10245 PF00324 Amino acid permease NH456_10255 PF00491 Arginase family NH456_10275 PF01380 SIS domain NH456_10285 PF04608 Phosphatidylglycerophosphatase A NH456_10295 PF01029 NusB family NH456_10300 PF00885 6,7-dimethyl-8-ribityllumazine synthase NH456_10305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NH456_10305 PF00925 GTP cyclohydrolase II NH456_10330 PF02580 D-Tyr-tRNA(Tyr) deacylase NH456_10335 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NH456_10335 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NH456_10340 PF00581 Rhodanese-like domain NH456_10345 PF02666 Phosphatidylserine decarboxylase NH456_10350 PF03069 Acetamidase/Formamidase family NH456_10375 PF00072 Response regulator receiver domain NH456_10375 PF00486 Transcriptional regulatory protein, C terminal NH456_10385 PF00106 short chain dehydrogenase NH456_10390 PF01554 MatE NH456_10395 PF00155 Aminotransferase class I and II NH456_10400 PF04286 Protein of unknown function (DUF445) NH456_10415 PF04262 Glutamate-cysteine ligase NH456_10420 PF02600 Disulfide bond formation protein DsbB NH456_10425 PF04717 Type VI secretion system, phage-baseplate injector NH456_10425 PF13296 Putative type VI secretion system Rhs element Vgr NH456_10425 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NH456_10445 PF05728 Uncharacterised protein family (UPF0227) NH456_10455 PF00106 short chain dehydrogenase NH456_10460 PF04115 Ureidoglycolate lyase NH456_10465 PF03561 Allantoicase repeat NH456_10470 PF01494 FAD binding domain NH456_10480 PF00860 Permease family NH456_10485 PF00576 HIUase/Transthyretin family NH456_10525 PF07859 alpha/beta hydrolase fold NH456_10535 PF03960 ArsC family NH456_10545 PF00156 Phosphoribosyl transferase domain NH456_10550 PF00593 TonB dependent receptor NH456_10550 PF07715 TonB-dependent Receptor Plug Domain NH456_10560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NH456_10560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NH456_10565 PF04101 Glycosyltransferase family 28 C-terminal domain NH456_10565 PF03033 Glycosyltransferase family 28 N-terminal domain NH456_10570 PF01225 Mur ligase family, catalytic domain NH456_10570 PF02875 Mur ligase family, glutamate ligase domain NH456_10570 PF08245 Mur ligase middle domain NH456_10575 PF07478 D-ala D-ala ligase C-terminus NH456_10575 PF01820 D-ala D-ala ligase N-terminus NH456_10580 PF08478 POTRA domain, FtsQ-type NH456_10580 PF03799 Cell division protein FtsQ NH456_10585 PF02491 SHS2 domain inserted in FTSA NH456_10590 PF00091 Tubulin/FtsZ family, GTPase domain NH456_10590 PF12327 FtsZ family, C-terminal domain NH456_10605 PF01551 Peptidase family M23 NH456_10610 PF17831 Pyruvate dehydrogenase E1 component middle domain NH456_10610 PF00456 Transketolase, thiamine diphosphate binding domain NH456_10645 PF01613 Flavin reductase like domain NH456_10645 PF00258 Flavodoxin NH456_10650 PF03692 Putative zinc- or iron-chelating domain NH456_10655 PF00571 CBS domain NH456_10655 PF00478 IMP dehydrogenase / GMP reductase domain NH456_10660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH456_10660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH456_10660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH456_10660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH456_10665 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NH456_10665 PF01243 Pyridoxamine 5'-phosphate oxidase NH456_10670 PF01368 DHH family NH456_10670 PF02272 DHHA1 domain NH456_10670 PF17768 RecJ OB domain NH456_10690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH456_10695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NH456_10700 PF04452 RNA methyltransferase NH456_10705 PF00924 Mechanosensitive ion channel NH456_10715 PF16177 Acetyl-coenzyme A synthetase N-terminus NH456_10715 PF13193 AMP-binding enzyme C-terminal domain NH456_10715 PF00501 AMP-binding enzyme NH456_10720 PF00857 Isochorismatase family NH456_10725 PF01037 Lrp/AsnC ligand binding domain NH456_10755 PF00672 HAMP domain NH456_10755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_10755 PF00512 His Kinase A (phospho-acceptor) domain NH456_10755 PF01627 Hpt domain NH456_10755 PF00072 Response regulator receiver domain NH456_10760 PF04341 Protein of unknown function, DUF485 NH456_10775 PF02028 BCCT, betaine/carnitine/choline family transporter NH456_10785 PF00990 Diguanylate cyclase, GGDEF domain NH456_10800 PF16925 Tetracyclin repressor-like, C-terminal domain NH456_10800 PF00440 Bacterial regulatory proteins, tetR family NH456_10805 PF08240 Alcohol dehydrogenase GroES-like domain NH456_10805 PF00107 Zinc-binding dehydrogenase NH456_10815 PF06942 GlpM protein NH456_10820 PF02581 Thiamine monophosphate synthase NH456_10820 PF08543 Phosphomethylpyrimidine kinase NH456_10820 PF03070 TENA/THI-4/PQQC family NH456_10830 PF07690 Major Facilitator Superfamily NH456_10835 PF00436 Single-strand binding protein family NH456_10845 PF03591 AzlC protein NH456_10860 PF00392 Bacterial regulatory proteins, gntR family NH456_10860 PF00155 Aminotransferase class I and II NH456_10865 PF00202 Aminotransferase class-III NH456_10870 PF00171 Aldehyde dehydrogenase family NH456_10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_10880 PF00857 Isochorismatase family NH456_10885 PF05726 Pirin C-terminal cupin domain NH456_10885 PF02678 Pirin NH456_10890 PF01593 Flavin containing amine oxidoreductase NH456_10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_10915 PF03466 LysR substrate binding domain NH456_10935 PF00248 Aldo/keto reductase family NH456_10940 PF02311 AraC-like ligand binding domain NH456_10940 PF12833 Helix-turn-helix domain NH456_10970 PF01638 HxlR-like helix-turn-helix NH456_10995 PF02705 K+ potassium transporter NH456_11020 PF00230 Major intrinsic protein NH456_11035 PF00977 Histidine biosynthesis protein NH456_11055 PF03992 Antibiotic biosynthesis monooxygenase NH456_11070 PF00977 Histidine biosynthesis protein NH456_11085 PF00117 Glutamine amidotransferase class-I NH456_11090 PF00475 Imidazoleglycerol-phosphate dehydratase NH456_11115 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NH456_11115 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NH456_11125 PF00672 HAMP domain NH456_11125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_11125 PF00512 His Kinase A (phospho-acceptor) domain NH456_11130 PF00072 Response regulator receiver domain NH456_11130 PF00486 Transcriptional regulatory protein, C terminal NH456_11135 PF17674 HHH domain NH456_11135 PF00575 S1 RNA binding domain NH456_11135 PF09371 Tex-like protein N-terminal domain NH456_11135 PF16921 Tex protein YqgF-like domain NH456_11140 PF01740 STAS domain NH456_11140 PF00916 Sulfate permease family NH456_11145 PF00106 short chain dehydrogenase NH456_11155 PF00005 ABC transporter NH456_11155 PF12848 ABC transporter NH456_11180 PF04191 Phospholipid methyltransferase NH456_11200 PF00529 HlyD membrane-fusion protein of T1SS NH456_11200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH456_11210 PF01545 Cation efflux family NH456_11240 PF00324 Amino acid permease NH456_11255 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH456_11270 PF01795 MraW methylase family NH456_11280 PF03717 Penicillin-binding Protein dimerisation domain NH456_11280 PF00905 Penicillin binding protein transpeptidase domain NH456_11285 PF01225 Mur ligase family, catalytic domain NH456_11285 PF02875 Mur ligase family, glutamate ligase domain NH456_11285 PF08245 Mur ligase middle domain NH456_11295 PF00953 Glycosyl transferase family 4 NH456_11305 PF13847 Methyltransferase domain NH456_11315 PF11104 Type IV pilus assembly protein PilM; NH456_11320 PF05137 Fimbrial assembly protein (PilN) NH456_11335 PF00263 Bacterial type II and III secretion system protein NH456_11335 PF07660 Secretin and TonB N terminus short domain NH456_11335 PF03958 Bacterial type II/III secretion system short domain NH456_11335 PF11741 AMIN domain NH456_11345 PF01761 3-dehydroquinate synthase NH456_11355 PF04898 Glutamate synthase central domain NH456_11355 PF00310 Glutamine amidotransferases class-II NH456_11355 PF01645 Conserved region in glutamate synthase NH456_11355 PF01493 GXGXG motif NH456_11360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NH456_11360 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_11370 PF04011 LemA family NH456_11385 PF07963 Prokaryotic N-terminal methylation motif NH456_11385 PF00114 Pilin (bacterial filament) NH456_11400 PF00210 Ferritin-like domain NH456_11405 PF04324 BFD-like [2Fe-2S] binding domain NH456_11410 PF01042 Endoribonuclease L-PSP NH456_11425 PF01192 RNA polymerase Rpb6 NH456_11430 PF00625 Guanylate kinase NH456_11435 PF02401 LytB protein NH456_11475 PF00886 Ribosomal protein S16 NH456_11480 PF05239 PRC-barrel domain NH456_11480 PF01782 RimM N-terminal domain NH456_11485 PF01746 tRNA (Guanine-1)-methyltransferase NH456_11490 PF01245 Ribosomal protein L19 NH456_11510 PF01925 Sulfite exporter TauE/SafE NH456_11520 PF00892 EamA-like transporter family NH456_11525 PF00892 EamA-like transporter family NH456_11530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH456_11530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH456_11535 PF02913 FAD linked oxidases, C-terminal domain NH456_11535 PF01565 FAD binding domain NH456_11550 PF02525 Flavodoxin-like fold NH456_11560 PF07690 Major Facilitator Superfamily NH456_11570 PF00080 Copper/zinc superoxide dismutase (SODC) NH456_11580 PF13614 AAA domain NH456_11610 PF00324 Amino acid permease NH456_11615 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NH456_11615 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NH456_11630 PF04958 Arginine N-succinyltransferase beta subunit NH456_11635 PF00171 Aldehyde dehydrogenase family NH456_11640 PF04996 Succinylarginine dihydrolase NH456_11645 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NH456_11660 PF05922 Peptidase inhibitor I9 NH456_11660 PF00082 Subtilase family NH456_11680 PF00892 EamA-like transporter family NH456_11695 PF02091 Glycyl-tRNA synthetase alpha subunit NH456_11720 PF00571 CBS domain NH456_11725 PF04024 PspC domain NH456_11735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_11735 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH456_11735 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_11735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_11745 PF01488 Shikimate / quinate 5-dehydrogenase NH456_11745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NH456_11745 PF08501 Shikimate dehydrogenase substrate binding domain NH456_11755 PF00925 GTP cyclohydrolase II NH456_11760 PF02780 Transketolase, C-terminal domain NH456_11760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NH456_11760 PF02779 Transketolase, pyrimidine binding domain NH456_11765 PF00459 Inositol monophosphatase family NH456_11770 PF00270 DEAD/DEAH box helicase NH456_11770 PF00271 Helicase conserved C-terminal domain NH456_11770 PF12343 Cold shock protein DEAD box A NH456_11770 PF03880 DbpA RNA binding domain NH456_11780 PF00005 ABC transporter NH456_11785 PF02405 Permease MlaE NH456_11795 PF05494 MlaC protein NH456_11805 PF01544 CorA-like Mg2+ transporter protein NH456_11810 PF03641 Possible lysine decarboxylase NH456_11815 PF00293 NUDIX domain NH456_11820 PF00156 Phosphoribosyl transferase domain NH456_11825 PF00270 DEAD/DEAH box helicase NH456_11825 PF00271 Helicase conserved C-terminal domain NH456_11825 PF17191 RecG wedge domain NH456_11840 PF01553 Acyltransferase NH456_11850 PF00375 Sodium:dicarboxylate symporter family NH456_11860 PF01926 50S ribosome-binding GTPase NH456_11865 PF02082 Transcriptional regulator NH456_11870 PF00970 Oxidoreductase FAD-binding domain NH456_11870 PF00042 Globin NH456_11870 PF00175 Oxidoreductase NAD-binding domain NH456_11875 PF05872 Bacterial protein of unknown function (DUF853) NH456_11880 PF01053 Cys/Met metabolism PLP-dependent enzyme NH456_11885 PF00117 Glutamine amidotransferase class-I NH456_11890 PF00338 Ribosomal protein S10p/S20e NH456_11895 PF00297 Ribosomal protein L3 NH456_11905 PF00276 Ribosomal protein L23 NH456_11910 PF00181 Ribosomal Proteins L2, RNA binding domain NH456_11910 PF03947 Ribosomal Proteins L2, C-terminal domain NH456_11915 PF00203 Ribosomal protein S19 NH456_11920 PF00237 Ribosomal protein L22p/L17e NH456_11930 PF00252 Ribosomal protein L16p/L10e NH456_11935 PF00831 Ribosomal L29 protein NH456_11940 PF00366 Ribosomal protein S17 NH456_11945 PF00238 Ribosomal protein L14p/L23e NH456_11950 PF00467 KOW motif NH456_11950 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NH456_11955 PF00673 ribosomal L5P family C-terminus NH456_11955 PF00281 Ribosomal protein L5 NH456_11960 PF00253 Ribosomal protein S14p/S29e NH456_11965 PF00410 Ribosomal protein S8 NH456_11970 PF00347 Ribosomal protein L6 NH456_11975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NH456_11980 PF00333 Ribosomal protein S5, N-terminal domain NH456_11980 PF03719 Ribosomal protein S5, C-terminal domain NH456_11985 PF00327 Ribosomal protein L30p/L7e NH456_11990 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NH456_11995 PF00344 SecY translocase NH456_12000 PF00444 Ribosomal protein L36 NH456_12005 PF00416 Ribosomal protein S13/S18 NH456_12010 PF00411 Ribosomal protein S11 NH456_12015 PF00163 Ribosomal protein S4/S9 N-terminal domain NH456_12015 PF01479 S4 domain NH456_12020 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NH456_12020 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NH456_12020 PF01000 RNA polymerase Rpb3/RpoA insert domain NH456_12025 PF01196 Ribosomal protein L17 NH456_12030 PF00743 Flavin-binding monooxygenase-like NH456_12035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_12035 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_12035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_12040 PF03937 Flavinator of succinate dehydrogenase NH456_12070 PF09526 Probable metal-binding protein (DUF2387) NH456_12135 PF00892 EamA-like transporter family NH456_12140 PF03631 Virulence factor BrkB NH456_12145 PF03358 NADPH-dependent FMN reductase NH456_12170 PF02130 Uncharacterized protein family UPF0054 NH456_12195 PF00056 lactate/malate dehydrogenase, NAD binding domain NH456_12195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NH456_12215 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NH456_12270 PF17932 Tetracyclin repressor-like, C-terminal domain NH456_12270 PF00440 Bacterial regulatory proteins, tetR family NH456_12285 PF01039 Carboxyl transferase domain NH456_12290 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_12290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_12290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_12300 PF00289 Biotin carboxylase, N-terminal domain NH456_12300 PF00364 Biotin-requiring enzyme NH456_12300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH456_12300 PF02785 Biotin carboxylase C-terminal domain NH456_12310 PF04386 Stringent starvation protein B NH456_12320 PF00380 Ribosomal protein S9/S16 NH456_12325 PF00572 Ribosomal protein L13 NH456_12330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NH456_12335 PF00398 Ribosomal RNA adenine dimethylase NH456_12375 PF10518 TAT (twin-arginine translocation) pathway signal sequence NH456_12375 PF00149 Calcineurin-like phosphoesterase NH456_12380 PF01389 OmpA-like transmembrane domain NH456_12380 PF00691 OmpA family NH456_12385 PF17152 Periplasmic sensor domain NH456_12385 PF00990 Diguanylate cyclase, GGDEF domain NH456_12420 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_12420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH456_12430 PF04273 Putative phosphatase (DUF442) NH456_12430 PF00753 Metallo-beta-lactamase superfamily NH456_12435 PF00561 alpha/beta hydrolase fold NH456_12440 PF00085 Thioredoxin NH456_12445 PF03061 Thioesterase superfamily NH456_12455 PF04461 Protein of unknown function (DUF520) NH456_12475 PF03795 YCII-related domain NH456_12485 PF02811 PHP domain NH456_12490 PF01062 Bestrophin, RFP-TM, chloride channel NH456_12495 PF04002 RadC-like JAB domain NH456_12500 PF02441 Flavoprotein NH456_12500 PF04127 DNA / pantothenate metabolism flavoprotein NH456_12505 PF02355 Protein export membrane protein NH456_12505 PF07549 SecD/SecF GG Motif NH456_12510 PF02355 Protein export membrane protein NH456_12510 PF13721 SecD export protein N-terminal TM region NH456_12510 PF07549 SecD/SecF GG Motif NH456_12515 PF02699 Preprotein translocase subunit NH456_12520 PF01702 Queuine tRNA-ribosyltransferase NH456_12535 PF02547 Queuosine biosynthesis protein NH456_12570 PF00512 His Kinase A (phospho-acceptor) domain NH456_12570 PF07689 KaiB domain NH456_12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_12575 PF08335 GlnD PII-uridylyltransferase NH456_12575 PF03710 Glutamate-ammonia ligase adenylyltransferase NH456_12580 PF01063 Amino-transferase class IV NH456_12595 PF01522 Polysaccharide deacetylase NH456_12600 PF00535 Glycosyl transferase family 2 NH456_12630 PF11380 Stealth protein CR2, conserved region 2 NH456_12630 PF17101 Stealth protein CR1, conserved region 1 NH456_12630 PF17102 Stealth protein CR3, conserved region 3 NH456_12665 PF06146 Phosphate-starvation-inducible E NH456_12670 PF02798 Glutathione S-transferase, N-terminal domain NH456_12670 PF00043 Glutathione S-transferase, C-terminal domain NH456_12680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_12680 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH456_12680 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_12680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_12685 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH456_12685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_12685 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_12685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_12695 PF00512 His Kinase A (phospho-acceptor) domain NH456_12695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_12695 PF00672 HAMP domain NH456_12700 PF00072 Response regulator receiver domain NH456_12700 PF00486 Transcriptional regulatory protein, C terminal NH456_12705 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NH456_12725 PF01923 Cobalamin adenosyltransferase NH456_12730 PF07715 TonB-dependent Receptor Plug Domain NH456_12730 PF00593 TonB dependent receptor NH456_12740 PF00291 Pyridoxal-phosphate dependent enzyme NH456_12765 PF00290 Tryptophan synthase alpha chain NH456_12770 PF01039 Carboxyl transferase domain NH456_12775 PF08245 Mur ligase middle domain NH456_12775 PF02875 Mur ligase family, glutamate ligase domain NH456_12790 PF00753 Metallo-beta-lactamase superfamily NH456_12815 PF03006 Haemolysin-III related NH456_12840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH456_12840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH456_12840 PF00378 Enoyl-CoA hydratase/isomerase NH456_12845 PF00108 Thiolase, N-terminal domain NH456_12845 PF02803 Thiolase, C-terminal domain NH456_12850 PF02311 AraC-like ligand binding domain NH456_12850 PF12833 Helix-turn-helix domain NH456_12855 PF02515 CoA-transferase family III NH456_12860 PF04966 Carbohydrate-selective porin, OprB family NH456_12865 PF01011 PQQ enzyme repeat NH456_12870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH456_12870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH456_12880 PF00893 Small Multidrug Resistance protein NH456_12890 PF02803 Thiolase, C-terminal domain NH456_12890 PF00108 Thiolase, N-terminal domain NH456_12910 PF01139 tRNA-splicing ligase RtcB NH456_12915 PF00324 Amino acid permease NH456_12920 PF05175 Methyltransferase small domain NH456_12920 PF08468 Methyltransferase small domain N-terminal NH456_12925 PF00860 Permease family NH456_12930 PF00009 Elongation factor Tu GTP binding domain NH456_12930 PF03144 Elongation factor Tu domain 2 NH456_12930 PF00679 Elongation factor G C-terminus NH456_12935 PF01741 Large-conductance mechanosensitive channel, MscL NH456_12955 PF02245 Methylpurine-DNA glycosylase (MPG) NH456_12975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH456_12990 PF10411 Disulfide bond isomerase protein N-terminus NH456_12990 PF13098 Thioredoxin-like domain NH456_12995 PF01571 Aminomethyltransferase folate-binding domain NH456_13005 PF04343 Protein of unknown function, DUF488 NH456_13010 PF08274 PhnA Zinc-Ribbon NH456_13010 PF03831 PhnA domain NH456_13015 PF07411 Domain of unknown function (DUF1508) NH456_13020 PF04073 Aminoacyl-tRNA editing domain NH456_13020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH456_13020 PF03129 Anticodon binding domain NH456_13040 PF00072 Response regulator receiver domain NH456_13045 PF00072 Response regulator receiver domain NH456_13050 PF01584 CheW-like domain NH456_13055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH456_13055 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NH456_13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_13060 PF01627 Hpt domain NH456_13060 PF00072 Response regulator receiver domain NH456_13060 PF01584 CheW-like domain NH456_13075 PF08085 Entericidin EcnA/B family NH456_13085 PF04304 Protein of unknown function (DUF454) NH456_13090 PF03734 L,D-transpeptidase catalytic domain NH456_13090 PF17969 L,D-transpeptidase C-terminal domain NH456_13130 PF00258 Flavodoxin NH456_13130 PF00175 Oxidoreductase NAD-binding domain NH456_13130 PF00667 FAD binding domain NH456_13140 PF12805 FUSC-like inner membrane protein yccS NH456_13150 PF00881 Nitroreductase family NH456_13175 PF13291 ACT domain NH456_13175 PF00291 Pyridoxal-phosphate dependent enzyme NH456_13180 PF05992 SbmA/BacA-like family NH456_13210 PF02637 GatB domain NH456_13210 PF02934 GatB/GatE catalytic domain NH456_13215 PF01425 Amidase NH456_13220 PF02686 Glu-tRNAGln amidotransferase C subunit NH456_13230 PF04085 rod shape-determining protein MreC NH456_13235 PF04093 rod shape-determining protein MreD NH456_13240 PF02545 Maf-like protein NH456_13245 PF10150 Ribonuclease E/G family NH456_13245 PF00575 S1 RNA binding domain NH456_13255 PF06974 Protein of unknown function (DUF1298) NH456_13255 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NH456_13260 PF01507 Phosphoadenosine phosphosulfate reductase family NH456_13295 PF02673 Bacitracin resistance protein BacA NH456_13305 PF16197 Ketoacyl-synthetase C-terminal extension NH456_13305 PF00698 Acyl transferase domain NH456_13305 PF08240 Alcohol dehydrogenase GroES-like domain NH456_13305 PF08990 Erythronolide synthase docking NH456_13305 PF09277 Erythronolide synthase, docking NH456_13305 PF00109 Beta-ketoacyl synthase, N-terminal domain NH456_13305 PF02801 Beta-ketoacyl synthase, C-terminal domain NH456_13305 PF08659 KR domain NH456_13305 PF00550 Phosphopantetheine attachment site NH456_13305 PF14765 Polyketide synthase dehydratase NH456_13310 PF01965 DJ-1/PfpI family NH456_13320 PF00324 Amino acid permease NH456_13325 PF04303 PrpF protein NH456_13330 PF00348 Polyprenyl synthetase NH456_13335 PF04237 YjbR NH456_13340 PF01145 SPFH domain / Band 7 family NH456_13350 PF01734 Patatin-like phospholipase NH456_13370 PF08019 Phosphoethanolamine transferase EptA/EptB NH456_13370 PF00884 Sulfatase NH456_13390 PF00909 Ammonium Transporter Family NH456_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_13395 PF03466 LysR substrate binding domain NH456_13440 PF01906 Putative heavy-metal-binding NH456_13445 PF02321 Outer membrane efflux protein NH456_13450 PF00873 AcrB/AcrD/AcrF family NH456_13455 PF00529 HlyD membrane-fusion protein of T1SS NH456_13455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH456_13460 PF01569 PAP2 superfamily NH456_13470 PF00348 Polyprenyl synthetase NH456_13480 PF00829 Ribosomal prokaryotic L21 protein NH456_13485 PF01016 Ribosomal L27 protein NH456_13500 PF02403 Seryl-tRNA synthetase N-terminal domain NH456_13500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH456_13505 PF10414 Sirohaem synthase dimerisation region NH456_13505 PF14824 Sirohaem biosynthesis protein central NH456_13505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NH456_13510 PF00588 SpoU rRNA Methylase family NH456_13515 PF01638 HxlR-like helix-turn-helix NH456_13520 PF03358 NADPH-dependent FMN reductase NH456_13525 PF13520 Amino acid permease NH456_13530 PF00465 Iron-containing alcohol dehydrogenase NH456_13545 PF04359 Protein of unknown function (DUF493) NH456_13570 PF00581 Rhodanese-like domain NH456_13570 PF17773 UPF0176 acylphosphatase like domain NH456_13580 PF00285 Citrate synthase, C-terminal domain NH456_13585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NH456_13590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NH456_13595 PF00890 FAD binding domain NH456_13595 PF02910 Fumarate reductase flavoprotein C-term NH456_13600 PF13085 2Fe-2S iron-sulfur cluster binding domain NH456_13625 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_13625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH456_13630 PF00549 CoA-ligase NH456_13630 PF08442 ATP-grasp domain NH456_13640 PF00579 tRNA synthetases class I (W and Y) NH456_13645 PF05661 Protein of unknown function (DUF808) NH456_13650 PF04228 Putative neutral zinc metallopeptidase NH456_13655 PF00999 Sodium/hydrogen exchanger family NH456_13670 PF09587 Bacterial capsule synthesis protein PGA_cap NH456_13685 PF00582 Universal stress protein family NH456_13690 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_13700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NH456_13700 PF02142 MGS-like domain NH456_13700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH456_13705 PF00117 Glutamine amidotransferase class-I NH456_13705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NH456_13725 PF01728 FtsJ-like methyltransferase NH456_13730 PF01434 Peptidase family M41 NH456_13730 PF00004 ATPase family associated with various cellular activities (AAA) NH456_13730 PF17862 AAA+ lid domain NH456_13730 PF06480 FtsH Extracellular NH456_13735 PF00809 Pterin binding enzyme NH456_13755 PF09423 PhoD-like phosphatase NH456_13755 PF16655 PhoD-like phosphatase, N-terminal domain NH456_13770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NH456_13770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NH456_13785 PF00083 Sugar (and other) transporter NH456_13800 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NH456_13800 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NH456_13805 PF00781 Diacylglycerol kinase catalytic domain NH456_13810 PF00149 Calcineurin-like phosphoesterase NH456_13820 PF00166 Chaperonin 10 Kd subunit NH456_13830 PF01219 Prokaryotic diacylglycerol kinase NH456_13835 PF00753 Metallo-beta-lactamase superfamily NH456_13840 PF03009 Glycerophosphoryl diester phosphodiesterase family NH456_13855 PF01435 Peptidase family M48 NH456_13860 PF01464 Transglycosylase SLT domain NH456_13865 PF01171 PP-loop family NH456_13880 PF01272 Transcription elongation factor, GreA/GreB, C-term NH456_13880 PF03449 Transcription elongation factor, N-terminal NH456_13925 PF00881 Nitroreductase family NH456_13940 PF02595 Glycerate kinase family NH456_13945 PF00384 Molybdopterin oxidoreductase NH456_13950 PF02634 FdhD/NarQ family NH456_13960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH456_13960 PF11890 Domain of unknown function (DUF3410) NH456_13960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH456_13965 PF00152 tRNA synthetases class II (D, K and N) NH456_13980 PF00324 Amino acid permease NH456_13990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NH456_13990 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NH456_13995 PF01678 Diaminopimelate epimerase NH456_14000 PF01810 LysE type translocator NH456_14005 PF02899 Phage integrase, N-terminal SAM-like domain NH456_14005 PF00589 Phage integrase family NH456_14015 PF01012 Electron transfer flavoprotein domain NH456_14015 PF00766 Electron transfer flavoprotein FAD-binding domain NH456_14020 PF03989 DNA gyrase C-terminal domain, beta-propeller NH456_14020 PF00521 DNA gyrase/topoisomerase IV, subunit A NH456_14035 PF00535 Glycosyl transferase family 2 NH456_14055 PF13533 Biotin-lipoyl like NH456_14065 PF00266 Aminotransferase class-V NH456_14080 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NH456_14090 PF02687 FtsX-like permease family NH456_14090 PF12704 MacB-like periplasmic core domain NH456_14095 PF00005 ABC transporter NH456_14100 PF00753 Metallo-beta-lactamase superfamily NH456_14100 PF13567 Domain of unknown function (DUF4131) NH456_14100 PF03772 Competence protein NH456_14110 PF01343 Peptidase family S49 NH456_14110 PF06965 Na+/H+ antiporter 1 NH456_14115 PF12697 Alpha/beta hydrolase family NH456_14120 PF00551 Formyl transferase NH456_14125 PF00586 AIR synthase related protein, N-terminal domain NH456_14125 PF02769 AIR synthase related protein, C-terminal domain NH456_14130 PF01594 AI-2E family transporter NH456_14135 PF11638 DnaA N-terminal domain NH456_14135 PF08299 Bacterial dnaA protein helix-turn-helix NH456_14135 PF00308 Bacterial dnaA protein NH456_14165 PF00588 SpoU rRNA Methylase family NH456_14165 PF08032 RNA 2'-O ribose methyltransferase substrate binding NH456_14170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NH456_14205 PF02472 Biopolymer transport protein ExbD/TolR NH456_14210 PF01618 MotA/TolQ/ExbB proton channel family NH456_14215 PF03061 Thioesterase superfamily NH456_14220 PF01546 Peptidase family M20/M25/M40 NH456_14220 PF07687 Peptidase dimerisation domain NH456_14225 PF05496 Holliday junction DNA helicase RuvB P-loop domain NH456_14225 PF05491 RuvB C-terminal winged helix domain NH456_14225 PF17864 RuvB AAA lid domain NH456_14230 PF07499 RuvA, C-terminal domain NH456_14230 PF01330 RuvA N terminal domain NH456_14235 PF01966 HD domain NH456_14245 PF07690 Major Facilitator Superfamily NH456_14255 PF01784 NIF3 (NGG1p interacting factor 3) NH456_14265 PF01467 Cytidylyltransferase-like NH456_14265 PF00293 NUDIX domain NH456_14275 PF00578 AhpC/TSA family NH456_14290 PF06508 Queuosine biosynthesis protein QueC NH456_14300 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_14300 PF14602 Hexapeptide repeat of succinyl-transferase NH456_14300 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NH456_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_14310 PF03466 LysR substrate binding domain NH456_14315 PF12857 TOBE-like domain NH456_14315 PF00005 ABC transporter NH456_14320 PF00528 Binding-protein-dependent transport system inner membrane component NH456_14325 PF00528 Binding-protein-dependent transport system inner membrane component NH456_14340 PF01063 Amino-transferase class IV NH456_14345 PF02618 YceG-like family NH456_14360 PF00890 FAD binding domain NH456_14360 PF02910 Fumarate reductase flavoprotein C-term NH456_14365 PF13180 PDZ domain NH456_14375 PF06421 GTP-binding protein LepA C-terminus NH456_14375 PF03144 Elongation factor Tu domain 2 NH456_14375 PF00009 Elongation factor Tu GTP binding domain NH456_14375 PF00679 Elongation factor G C-terminus NH456_14380 PF10502 Signal peptidase, peptidase S26 NH456_14390 PF00035 Double-stranded RNA binding motif NH456_14390 PF14622 Ribonuclease-III-like NH456_14405 PF11967 Recombination protein O N terminal NH456_14405 PF02565 Recombination protein O C terminal NH456_14410 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NH456_14415 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NH456_14420 PF00106 short chain dehydrogenase NH456_14450 PF00155 Aminotransferase class I and II NH456_14460 PF17151 Periplasmic sensor domain NH456_14460 PF00990 Diguanylate cyclase, GGDEF domain NH456_14480 PF00892 EamA-like transporter family NH456_14500 PF01018 GTP1/OBG NH456_14500 PF01926 50S ribosome-binding GTPase NH456_14515 PF07759 Protein of unknown function (DUF1615) NH456_14525 PF03060 Nitronate monooxygenase NH456_14540 PF02350 UDP-N-acetylglucosamine 2-epimerase NH456_14575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH456_14625 PF06779 Uncharacterised MFS-type transporter YbfB NH456_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_14630 PF03466 LysR substrate binding domain NH456_14640 PF02567 Phenazine biosynthesis-like protein NH456_14645 PF00675 Insulinase (Peptidase family M16) NH456_14645 PF05193 Peptidase M16 inactive domain NH456_14670 PF02581 Thiamine monophosphate synthase NH456_14675 PF00202 Aminotransferase class-III NH456_14685 PF00849 RNA pseudouridylate synthase NH456_14690 PF12137 RNA polymerase recycling family C-terminal NH456_14690 PF00271 Helicase conserved C-terminal domain NH456_14690 PF00176 SNF2 family N-terminal domain NH456_14690 PF18337 RapA N-terminal Tudor like domain NH456_14690 PF18339 RapA N-terminal Tudor like domain 1 NH456_14700 PF00440 Bacterial regulatory proteins, tetR family NH456_14705 PF00175 Oxidoreductase NAD-binding domain NH456_14705 PF00970 Oxidoreductase FAD-binding domain NH456_14705 PF00111 2Fe-2S iron-sulfur cluster binding domain NH456_14710 PF00487 Fatty acid desaturase NH456_14720 PF17754 MftR C-terminal domain NH456_14720 PF00440 Bacterial regulatory proteins, tetR family NH456_14730 PF00202 Aminotransferase class-III NH456_14735 PF00282 Pyridoxal-dependent decarboxylase conserved domain NH456_14745 PF01037 Lrp/AsnC ligand binding domain NH456_14755 PF00324 Amino acid permease NH456_14760 PF12849 PBP superfamily domain NH456_14765 PF00528 Binding-protein-dependent transport system inner membrane component NH456_14770 PF00528 Binding-protein-dependent transport system inner membrane component NH456_14775 PF00005 ABC transporter NH456_14795 PF04356 Protein of unknown function (DUF489) NH456_14805 PF00293 NUDIX domain NH456_14805 PF13344 Haloacid dehalogenase-like hydrolase NH456_14810 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_14815 PF07943 Penicillin-binding protein 5, C-terminal domain NH456_14815 PF00768 D-alanyl-D-alanine carboxypeptidase NH456_14840 PF03466 LysR substrate binding domain NH456_14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_14845 PF13654 AAA domain NH456_14845 PF05362 Lon protease (S16) C-terminal proteolytic domain NH456_14850 PF07690 Major Facilitator Superfamily NH456_14855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH456_14860 PF13593 SBF-like CPA transporter family (DUF4137) NH456_14865 PF01197 Ribosomal protein L31 NH456_14880 PF04055 Radical SAM superfamily NH456_14885 PF01132 Elongation factor P (EF-P) OB domain NH456_14885 PF09285 Elongation factor P, C-terminal NH456_14885 PF08207 Elongation factor P (EF-P) KOW-like domain NH456_14890 PF02554 Carbon starvation protein CstA NH456_14890 PF13722 5TM C-terminal transporter carbon starvation CstA NH456_14895 PF04328 Selenoprotein, putative NH456_14945 PF00171 Aldehyde dehydrogenase family NH456_14950 PF00324 Amino acid permease NH456_14955 PF03466 LysR substrate binding domain NH456_14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_14960 PF02028 BCCT, betaine/carnitine/choline family transporter NH456_14965 PF02028 BCCT, betaine/carnitine/choline family transporter NH456_14970 PF00355 Rieske [2Fe-2S] domain NH456_14970 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH456_14975 PF00171 Aldehyde dehydrogenase family NH456_14985 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_14985 PF18113 Rubredoxin binding C-terminal domain NH456_14990 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NH456_14990 PF01266 FAD dependent oxidoreductase NH456_15010 PF00892 EamA-like transporter family NH456_15020 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NH456_15025 PF00083 Sugar (and other) transporter NH456_15030 PF13378 Enolase C-terminal domain-like NH456_15030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NH456_15035 PF08659 KR domain NH456_15035 PF02801 Beta-ketoacyl synthase, C-terminal domain NH456_15035 PF00550 Phosphopantetheine attachment site NH456_15035 PF00109 Beta-ketoacyl synthase, N-terminal domain NH456_15035 PF16197 Ketoacyl-synthetase C-terminal extension NH456_15035 PF09277 Erythronolide synthase, docking NH456_15035 PF14765 Polyketide synthase dehydratase NH456_15035 PF08240 Alcohol dehydrogenase GroES-like domain NH456_15035 PF00698 Acyl transferase domain NH456_15035 PF08990 Erythronolide synthase docking NH456_15040 PF00440 Bacterial regulatory proteins, tetR family NH456_15060 PF02678 Pirin NH456_15060 PF17954 Quercetinase C-terminal cupin domain NH456_15070 PF13309 HTH domain NH456_15070 PF08348 YheO-like PAS domain NH456_15080 PF00501 AMP-binding enzyme NH456_15080 PF13193 AMP-binding enzyme C-terminal domain NH456_15080 PF00668 Condensation domain NH456_15080 PF00550 Phosphopantetheine attachment site NH456_15085 PF00975 Thioesterase domain NH456_15085 PF00550 Phosphopantetheine attachment site NH456_15085 PF13193 AMP-binding enzyme C-terminal domain NH456_15085 PF00501 AMP-binding enzyme NH456_15085 PF00668 Condensation domain NH456_15090 PF01032 FecCD transport family NH456_15100 PF00005 ABC transporter NH456_15105 PF01497 Periplasmic binding protein NH456_15110 PF07715 TonB-dependent Receptor Plug Domain NH456_15110 PF00593 TonB dependent receptor NH456_15115 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NH456_15125 PF00501 AMP-binding enzyme NH456_15125 PF13193 AMP-binding enzyme C-terminal domain NH456_15130 PF00857 Isochorismatase family NH456_15130 PF00550 Phosphopantetheine attachment site NH456_15135 PF00282 Pyridoxal-dependent decarboxylase conserved domain NH456_15145 PF00005 ABC transporter NH456_15155 PF00975 Thioesterase domain NH456_15165 PF00425 chorismate binding enzyme NH456_15175 PF01208 Uroporphyrinogen decarboxylase (URO-D) NH456_15180 PF05675 Protein of unknown function (DUF817) NH456_15195 PF00144 Beta-lactamase NH456_15205 PF01227 GTP cyclohydrolase I NH456_15210 PF00111 2Fe-2S iron-sulfur cluster binding domain NH456_15210 PF01799 [2Fe-2S] binding domain NH456_15230 PF00218 Indole-3-glycerol phosphate synthase NH456_15235 PF02885 Glycosyl transferase family, helical bundle domain NH456_15235 PF00591 Glycosyl transferase family, a/b domain NH456_15245 PF11838 ERAP1-like C-terminal domain NH456_15245 PF01433 Peptidase family M1 domain NH456_15250 PF00117 Glutamine amidotransferase class-I NH456_15260 PF00854 POT family NH456_15270 PF04345 Chorismate lyase NH456_15275 PF01040 UbiA prenyltransferase family NH456_15310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NH456_15310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NH456_15315 PF01784 NIF3 (NGG1p interacting factor 3) NH456_15320 PF13180 PDZ domain NH456_15325 PF01743 Poly A polymerase head domain NH456_15325 PF12627 Probable RNA and SrmB- binding site of polymerase A NH456_15335 PF00563 EAL domain NH456_15335 PF00990 Diguanylate cyclase, GGDEF domain NH456_15335 PF03707 Bacterial signalling protein N terminal repeat NH456_15345 PF02219 Methylenetetrahydrofolate reductase NH456_15350 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NH456_15350 PF05221 S-adenosyl-L-homocysteine hydrolase NH456_15365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_15365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_15365 PF09317 Domain of unknown function (DUF1974) NH456_15370 PF04055 Radical SAM superfamily NH456_15375 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_15375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH456_15395 PF00557 Metallopeptidase family M24 NH456_15400 PF00318 Ribosomal protein S2 NH456_15405 PF00889 Elongation factor TS NH456_15415 PF12833 Helix-turn-helix domain NH456_15435 PF03330 Lytic transglycolase NH456_15435 PF05036 Sporulation related domain NH456_15440 PF13406 Transglycosylase SLT domain NH456_15445 PF01098 Cell cycle protein NH456_15455 PF14489 QueF-like protein NH456_15455 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NH456_15460 PF01061 ABC-2 type transporter NH456_15465 PF00005 ABC transporter NH456_15495 PF00464 Serine hydroxymethyltransferase NH456_15505 PF00873 AcrB/AcrD/AcrF family NH456_15510 PF13533 Biotin-lipoyl like NH456_15515 PF03466 LysR substrate binding domain NH456_15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_15520 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH456_15525 PF00528 Binding-protein-dependent transport system inner membrane component NH456_15530 PF00528 Binding-protein-dependent transport system inner membrane component NH456_15535 PF00005 ABC transporter NH456_15540 PF00893 Small Multidrug Resistance protein NH456_15545 PF00037 4Fe-4S binding domain NH456_15550 PF01136 Peptidase family U32 NH456_15550 PF16325 Peptidase family U32 C-terminal domain NH456_15555 PF00155 Aminotransferase class I and II NH456_15555 PF00392 Bacterial regulatory proteins, gntR family NH456_15560 PF02567 Phenazine biosynthesis-like protein NH456_15565 PF00970 Oxidoreductase FAD-binding domain NH456_15565 PF00175 Oxidoreductase NAD-binding domain NH456_15570 PF01980 tRNA-methyltransferase O NH456_15570 PF18389 TrmO C-terminal domain NH456_15580 PF00437 Type II/IV secretion system protein NH456_15580 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NH456_15590 PF00072 Response regulator receiver domain NH456_15590 PF00486 Transcriptional regulatory protein, C terminal NH456_15595 PF08521 Two-component sensor kinase N-terminal NH456_15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH456_15595 PF00512 His Kinase A (phospho-acceptor) domain NH456_15605 PF00293 NUDIX domain NH456_15620 PF01513 ATP-NAD kinase NH456_15625 PF07023 Protein of unknown function (DUF1315) NH456_15630 PF02885 Glycosyl transferase family, helical bundle domain NH456_15630 PF00591 Glycosyl transferase family, a/b domain NH456_15635 PF00375 Sodium:dicarboxylate symporter family NH456_15640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_15640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_15640 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_15645 PF00756 Putative esterase NH456_15650 PF00800 Prephenate dehydratase NH456_15650 PF01817 Chorismate mutase type II NH456_15650 PF01842 ACT domain NH456_15655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NH456_15665 PF01546 Peptidase family M20/M25/M40 NH456_15665 PF07687 Peptidase dimerisation domain NH456_15670 PF12706 Beta-lactamase superfamily domain NH456_15680 PF03883 Peroxide stress protein YaaA NH456_15690 PF05690 Thiazole biosynthesis protein ThiG NH456_15700 PF04241 Protein of unknown function (DUF423) NH456_15705 PF00140 Sigma-70 factor, region 1.2 NH456_15705 PF04542 Sigma-70 region 2 NH456_15705 PF04545 Sigma-70, region 4 NH456_15720 PF00313 'Cold-shock' DNA-binding domain NH456_15725 PF00270 DEAD/DEAH box helicase NH456_15725 PF00271 Helicase conserved C-terminal domain NH456_15735 PF00881 Nitroreductase family NH456_15740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NH456_15740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NH456_15760 PF01180 Dihydroorotate dehydrogenase NH456_15765 PF02674 Colicin V production protein NH456_15770 PF00156 Phosphoribosyl transferase domain NH456_15790 PF01435 Peptidase family M48 NH456_15795 PF09424 Yqey-like protein NH456_15800 PF01165 Ribosomal protein S21 NH456_15805 PF00814 Glycoprotease family NH456_15825 PF00069 Protein kinase domain NH456_15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_15850 PF03466 LysR substrate binding domain NH456_15855 PF00202 Aminotransferase class-III NH456_15860 PF00171 Aldehyde dehydrogenase family NH456_15865 PF00324 Amino acid permease NH456_15880 PF13610 DDE domain NH456_15890 PF02021 Uncharacterised protein family UPF0102 NH456_15895 PF04972 BON domain NH456_15905 PF09297 NADH pyrophosphatase zinc ribbon domain NH456_15905 PF00293 NUDIX domain NH456_15915 PF00929 Exonuclease NH456_15920 PF01476 LysM domain NH456_15920 PF01464 Transglycosylase SLT domain NH456_15920 PF01476 LysM domain NH456_15920 PF01464 Transglycosylase SLT domain NH456_15925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH456_15930 PF00528 Binding-protein-dependent transport system inner membrane component NH456_15935 PF00528 Binding-protein-dependent transport system inner membrane component NH456_15935 PF12911 N-terminal TM domain of oligopeptide transport permease C NH456_15940 PF00005 ABC transporter NH456_15940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH456_15945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH456_15945 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_15960 PF00929 Exonuclease NH456_15965 PF01979 Amidohydrolase family NH456_15970 PF00563 EAL domain NH456_15970 PF01590 GAF domain NH456_15970 PF00990 Diguanylate cyclase, GGDEF domain NH456_15970 PF00360 Phytochrome region NH456_15975 PF00764 Arginosuccinate synthase NH456_15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_15980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH456_16000 PF03180 NLPA lipoprotein NH456_16070 PF01266 FAD dependent oxidoreductase NH456_16085 PF07729 FCD domain NH456_16085 PF00392 Bacterial regulatory proteins, gntR family NH456_16105 PF00202 Aminotransferase class-III NH456_16110 PF04958 Arginine N-succinyltransferase beta subunit NH456_16120 PF13610 DDE domain NH456_16125 PF02796 Helix-turn-helix domain of resolvase NH456_16125 PF00239 Resolvase, N terminal domain NH456_16135 PF13610 DDE domain NH456_16145 PF02796 Helix-turn-helix domain of resolvase NH456_16145 PF00239 Resolvase, N terminal domain NH456_16155 PF13610 DDE domain NH456_16165 PF00106 short chain dehydrogenase NH456_16175 PF17932 Tetracyclin repressor-like, C-terminal domain NH456_16175 PF00440 Bacterial regulatory proteins, tetR family NH456_16180 PF17954 Quercetinase C-terminal cupin domain NH456_16180 PF02678 Pirin NH456_16190 PF00106 short chain dehydrogenase NH456_16210 PF00962 Adenosine/AMP deaminase NH456_16215 PF01292 Prokaryotic cytochrome b561 NH456_16225 PF01351 Ribonuclease HII NH456_16230 PF02599 Global regulator protein family NH456_16235 PF13840 ACT domain NH456_16235 PF01842 ACT domain NH456_16235 PF00696 Amino acid kinase family NH456_16240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NH456_16240 PF01411 tRNA synthetases class II (A) NH456_16240 PF02272 DHHA1 domain NH456_16245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH456_16245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH456_16250 PF13393 Histidyl-tRNA synthetase NH456_16255 PF00709 Adenylosuccinate synthetase NH456_16270 PF00248 Aldo/keto reductase family NH456_16280 PF13545 Crp-like helix-turn-helix domain NH456_16280 PF00027 Cyclic nucleotide-binding domain NH456_16290 PF02566 OsmC-like protein NH456_16310 PF00004 ATPase family associated with various cellular activities (AAA) NH456_16310 PF07724 AAA domain (Cdc48 subfamily) NH456_16310 PF17871 AAA lid domain NH456_16310 PF02861 Clp amino terminal domain, pathogenicity island component NH456_16310 PF10431 C-terminal, D2-small domain, of ClpB protein NH456_16325 PF02926 THUMP domain NH456_16325 PF01170 Putative RNA methylase family UPF0020 NH456_16325 PF10672 S-adenosylmethionine-dependent methyltransferase NH456_16335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NH456_16335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NH456_16340 PF01979 Amidohydrolase family NH456_16345 PF13488 Glycine zipper NH456_16345 PF00691 OmpA family NH456_16355 PF00043 Glutathione S-transferase, C-terminal domain NH456_16355 PF13417 Glutathione S-transferase, N-terminal domain NH456_16360 PF02390 Putative methyltransferase NH456_16370 PF02798 Glutathione S-transferase, N-terminal domain NH456_16370 PF00043 Glutathione S-transferase, C-terminal domain NH456_16380 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH456_16380 PF13192 Thioredoxin domain NH456_16400 PF10417 C-terminal domain of 1-Cys peroxiredoxin NH456_16400 PF00578 AhpC/TSA family NH456_16405 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NH456_16405 PF00271 Helicase conserved C-terminal domain NH456_16405 PF00270 DEAD/DEAH box helicase NH456_16405 PF11898 Domain of unknown function (DUF3418) NH456_16405 PF04408 Helicase associated domain (HA2) NH456_16410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NH456_16410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NH456_16420 PF07690 Major Facilitator Superfamily NH456_16425 PF03594 Benzoate membrane transport protein NH456_16430 PF00106 short chain dehydrogenase NH456_16435 PF00970 Oxidoreductase FAD-binding domain NH456_16435 PF00111 2Fe-2S iron-sulfur cluster binding domain NH456_16435 PF00175 Oxidoreductase NAD-binding domain NH456_16440 PF00866 Ring hydroxylating beta subunit NH456_16445 PF00355 Rieske [2Fe-2S] domain NH456_16445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH456_16470 PF00376 MerR family regulatory protein NH456_16470 PF09278 MerR, DNA binding NH456_16505 PF02601 Exonuclease VII, large subunit NH456_16505 PF13742 OB-fold nucleic acid binding domain NH456_16540 PF00313 'Cold-shock' DNA-binding domain NH456_16575 PF07690 Major Facilitator Superfamily NH456_16580 PF01638 HxlR-like helix-turn-helix NH456_16605 PF01406 tRNA synthetases class I (C) catalytic domain NH456_16605 PF09190 DALR domain NH456_16610 PF00571 CBS domain NH456_16610 PF01380 SIS domain NH456_16625 PF03968 OstA-like protein NH456_16630 PF00005 ABC transporter NH456_16630 PF12399 Branched-chain amino acid ATP-binding cassette transporter NH456_16635 PF02321 Outer membrane efflux protein NH456_16640 PF00005 ABC transporter NH456_16640 PF03412 Peptidase C39 family NH456_16640 PF00664 ABC transporter transmembrane region NH456_16650 PF01205 Uncharacterized protein family UPF0029 NH456_16655 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_16665 PF01596 O-methyltransferase NH456_16675 PF00037 4Fe-4S binding domain NH456_16675 PF11953 Domain of unknown function (DUF3470) NH456_16690 PF01037 Lrp/AsnC ligand binding domain NH456_16695 PF00892 EamA-like transporter family NH456_16700 PF00563 EAL domain NH456_16700 PF03707 Bacterial signalling protein N terminal repeat NH456_16700 PF00990 Diguanylate cyclase, GGDEF domain NH456_16720 PF07690 Major Facilitator Superfamily NH456_16740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH456_16740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH456_16760 PF13419 Haloacid dehalogenase-like hydrolase NH456_16770 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NH456_16770 PF04717 Type VI secretion system, phage-baseplate injector NH456_16770 PF13296 Putative type VI secretion system Rhs element Vgr NH456_16775 PF03527 RHS protein NH456_16775 PF05593 RHS Repeat NH456_16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_16790 PF03466 LysR substrate binding domain NH456_16795 PF01566 Natural resistance-associated macrophage protein NH456_16800 PF03746 LamB/YcsF family NH456_16805 PF07286 Protein of unknown function (DUF1445) NH456_16815 PF00364 Biotin-requiring enzyme NH456_16815 PF02785 Biotin carboxylase C-terminal domain NH456_16815 PF00289 Biotin carboxylase, N-terminal domain NH456_16815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH456_16825 PF00654 Voltage gated chloride channel NH456_16855 PF08240 Alcohol dehydrogenase GroES-like domain NH456_16855 PF13823 Alcohol dehydrogenase GroES-associated NH456_16855 PF00107 Zinc-binding dehydrogenase NH456_16870 PF02785 Biotin carboxylase C-terminal domain NH456_16870 PF00289 Biotin carboxylase, N-terminal domain NH456_16870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH456_16875 PF02525 Flavodoxin-like fold NH456_16895 PF01402 Ribbon-helix-helix protein, copG family NH456_16895 PF08753 NikR C terminal nickel binding domain NH456_16900 PF01425 Amidase NH456_16905 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH456_16910 PF00005 ABC transporter NH456_16950 PF05947 Type VI secretion system, TssF NH456_16975 PF00691 OmpA family NH456_16975 PF01389 OmpA-like transmembrane domain NH456_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17020 PF03466 LysR substrate binding domain NH456_17030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH456_17035 PF07690 Major Facilitator Superfamily NH456_17040 PF07690 Major Facilitator Superfamily NH456_17055 PF02677 Epoxyqueuosine reductase QueH NH456_17070 PF00376 MerR family regulatory protein NH456_17070 PF09278 MerR, DNA binding NH456_17080 PF00701 Dihydrodipicolinate synthetase family NH456_17090 PF00392 Bacterial regulatory proteins, gntR family NH456_17095 PF05544 Proline racemase NH456_17100 PF01266 FAD dependent oxidoreductase NH456_17120 PF00083 Sugar (and other) transporter NH456_17125 PF00171 Aldehyde dehydrogenase family NH456_17130 PF13520 Amino acid permease NH456_17140 PF00171 Aldehyde dehydrogenase family NH456_17140 PF01575 MaoC like domain NH456_17145 PF05138 Phenylacetic acid catabolic protein NH456_17150 PF06243 Phenylacetic acid degradation B NH456_17155 PF05138 Phenylacetic acid catabolic protein NH456_17160 PF01883 Iron-sulfur cluster assembly protein NH456_17165 PF00970 Oxidoreductase FAD-binding domain NH456_17165 PF00111 2Fe-2S iron-sulfur cluster binding domain NH456_17165 PF00175 Oxidoreductase NAD-binding domain NH456_17170 PF00378 Enoyl-CoA hydratase/isomerase NH456_17175 PF00378 Enoyl-CoA hydratase/isomerase NH456_17180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH456_17180 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NH456_17180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH456_17190 PF00501 AMP-binding enzyme NH456_17190 PF14535 AMP-binding enzyme C-terminal domain NH456_17195 PF07848 PaaX-like protein NH456_17195 PF08223 PaaX-like protein C-terminal domain NH456_17200 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_17205 PF03061 Thioesterase superfamily NH456_17245 PF01292 Prokaryotic cytochrome b561 NH456_17265 PF12697 Alpha/beta hydrolase family NH456_17270 PF01613 Flavin reductase like domain NH456_17275 PF00296 Luciferase-like monooxygenase NH456_17280 PF00171 Aldehyde dehydrogenase family NH456_17290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NH456_17300 PF00171 Aldehyde dehydrogenase family NH456_17305 PF02627 Carboxymuconolactone decarboxylase family NH456_17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17310 PF03466 LysR substrate binding domain NH456_17315 PF02525 Flavodoxin-like fold NH456_17325 PF01494 FAD binding domain NH456_17330 PF07702 UTRA domain NH456_17330 PF00392 Bacterial regulatory proteins, gntR family NH456_17345 PF00528 Binding-protein-dependent transport system inner membrane component NH456_17350 PF01266 FAD dependent oxidoreductase NH456_17355 PF00266 Aminotransferase class-V NH456_17360 PF13419 Haloacid dehalogenase-like hydrolase NH456_17365 PF07690 Major Facilitator Superfamily NH456_17370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_17370 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_17370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_17375 PF02515 CoA-transferase family III NH456_17380 PF09339 IclR helix-turn-helix domain NH456_17385 PF00378 Enoyl-CoA hydratase/isomerase NH456_17390 PF03060 Nitronate monooxygenase NH456_17395 PF07690 Major Facilitator Superfamily NH456_17400 PF09339 IclR helix-turn-helix domain NH456_17410 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NH456_17410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH456_17410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH456_17420 PF00378 Enoyl-CoA hydratase/isomerase NH456_17425 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_17425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_17425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_17430 PF07690 Major Facilitator Superfamily NH456_17435 PF01144 Coenzyme A transferase NH456_17440 PF01144 Coenzyme A transferase NH456_17450 PF07690 Major Facilitator Superfamily NH456_17460 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_17460 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH456_17460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_17460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_17480 PF00682 HMGL-like NH456_17485 PF18140 Propionyl-coenzyme A carboxylase BT domain NH456_17485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH456_17485 PF00364 Biotin-requiring enzyme NH456_17485 PF00289 Biotin carboxylase, N-terminal domain NH456_17485 PF02785 Biotin carboxylase C-terminal domain NH456_17490 PF00378 Enoyl-CoA hydratase/isomerase NH456_17500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH456_17500 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_17500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_17505 PF00440 Bacterial regulatory proteins, tetR family NH456_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17530 PF03466 LysR substrate binding domain NH456_17565 PF18146 Damage-inducible protein CinA KH domain NH456_17565 PF00994 Probable molybdopterin binding domain NH456_17565 PF02464 Competence-damaged protein NH456_17600 PF00717 Peptidase S24-like NH456_17610 PF13404 AsnC-type helix-turn-helix domain NH456_17610 PF01037 Lrp/AsnC ligand binding domain NH456_17625 PF00072 Response regulator receiver domain NH456_17640 PF00528 Binding-protein-dependent transport system inner membrane component NH456_17650 PF00005 ABC transporter NH456_17655 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH456_17660 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH456_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17670 PF03466 LysR substrate binding domain NH456_17695 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_17700 PF00581 Rhodanese-like domain NH456_17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17710 PF03466 LysR substrate binding domain NH456_17715 PF02798 Glutathione S-transferase, N-terminal domain NH456_17720 PF14834 Glutathione S-transferase, C-terminal domain NH456_17720 PF02798 Glutathione S-transferase, N-terminal domain NH456_17725 PF03466 LysR substrate binding domain NH456_17725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17730 PF03788 LrgA family NH456_17735 PF04172 LrgB-like family NH456_17740 PF00392 Bacterial regulatory proteins, gntR family NH456_17740 PF00155 Aminotransferase class I and II NH456_17755 PF07690 Major Facilitator Superfamily NH456_17760 PF16957 Malonate decarboxylase, alpha subunit, transporter NH456_17765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NH456_17770 PF06857 Malonate decarboxylase delta subunit (MdcD) NH456_17775 PF01039 Carboxyl transferase domain NH456_17790 PF00698 Acyl transferase domain NH456_17825 PF01654 Cytochrome bd terminal oxidase subunit I NH456_17835 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH456_17835 PF02770 Acyl-CoA dehydrogenase, middle domain NH456_17835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH456_17840 PF00296 Luciferase-like monooxygenase NH456_17845 PF00083 Sugar (and other) transporter NH456_17860 PF00005 ABC transporter NH456_17865 PF00528 Binding-protein-dependent transport system inner membrane component NH456_17870 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NH456_17875 PF01177 Asp/Glu/Hydantoin racemase NH456_17880 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NH456_17890 PF03466 LysR substrate binding domain NH456_17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_17910 PF03960 ArsC family NH456_17915 PF01022 Bacterial regulatory protein, arsR family NH456_17920 PF01758 Sodium Bile acid symporter family NH456_17955 PF00132 Bacterial transferase hexapeptide (six repeats) NH456_17960 PF00588 SpoU rRNA Methylase family NH456_17975 PF00375 Sodium:dicarboxylate symporter family NH456_17980 PF00155 Aminotransferase class I and II NH456_17985 PF01641 SelR domain NH456_17990 PF00255 Glutathione peroxidase NH456_18005 PF00155 Aminotransferase class I and II NH456_18010 PF01909 Nucleotidyltransferase domain NH456_18010 PF01966 HD domain NH456_18010 PF08335 GlnD PII-uridylyltransferase NH456_18015 PF02222 ATP-grasp domain NH456_18025 PF05437 Branched-chain amino acid transport protein (AzlD) NH456_18030 PF03591 AzlC protein NH456_18060 PF00528 Binding-protein-dependent transport system inner membrane component NH456_18065 PF00005 ABC transporter NH456_18065 PF09383 NIL domain NH456_18070 PF03180 NLPA lipoprotein NH456_18075 PF03180 NLPA lipoprotein NH456_18080 PF00296 Luciferase-like monooxygenase NH456_18105 PF00528 Binding-protein-dependent transport system inner membrane component NH456_18115 PF00005 ABC transporter NH456_18125 PF01037 Lrp/AsnC ligand binding domain NH456_18130 PF01709 Transcriptional regulator NH456_18140 PF00440 Bacterial regulatory proteins, tetR family NH456_18160 PF03466 LysR substrate binding domain NH456_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH456_18170 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NH456_18180 PF00892 EamA-like transporter family NH456_18200 PF13953 PapC C-terminal domain NH456_18200 PF00577 Outer membrane usher protein NH456_18200 PF13954 PapC N-terminal domain NH456_18210 PF16970 Type-1 fimbrial protein, A NH456_18225 PF06968 Biotin and Thiamin Synthesis associated domain NH456_18225 PF04055 Radical SAM superfamily NH456_18230 PF08331 Domain of unknown function (DUF1730) NH456_18235 PF01256 Carbohydrate kinase NH456_18235 PF03853 YjeF-related protein N-terminus NH456_18240 PF02075 Crossover junction endodeoxyribonuclease RuvC NH456_18255 PF00905 Penicillin binding protein transpeptidase domain NH456_18275 PF00438 S-adenosylmethionine synthetase, N-terminal domain NH456_18275 PF02773 S-adenosylmethionine synthetase, C-terminal domain NH456_18275 PF02772 S-adenosylmethionine synthetase, central domain NH456_18280 PF02779 Transketolase, pyrimidine binding domain NH456_18280 PF02780 Transketolase, C-terminal domain NH456_18280 PF00456 Transketolase, thiamine diphosphate binding domain NH456_18300 PF09992 Phosphodiester glycosidase NH456_18320 PF14850 DNA-binding domain of Proline dehydrogenase NH456_18320 PF00171 Aldehyde dehydrogenase family NH456_18320 PF01619 Proline dehydrogenase NH456_18320 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NH456_18325 PF01037 Lrp/AsnC ligand binding domain NH456_18330 PF00474 Sodium:solute symporter family NH456_18335 PF02146 Sir2 family NH456_18340 PF01597 Glycine cleavage H-protein NH456_18345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH456_18345 PF12833 Helix-turn-helix domain NH456_18355 PF00664 ABC transporter transmembrane region NH456_18355 PF00005 ABC transporter NH456_18360 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NH456_18370 PF00375 Sodium:dicarboxylate symporter family NH456_18385 PF08007 Cupin superfamily protein NH456_18400 PF00162 Phosphoglycerate kinase NH456_18420 PF04453 LPS transport system D NH456_18420 PF03968 OstA-like protein NH456_18425 PF01636 Phosphotransferase enzyme family NH456_18430 PF00483 Nucleotidyl transferase NH456_18435 PF02527 rRNA small subunit methyltransferase G NH456_18450 PF01618 MotA/TolQ/ExbB proton channel family NH456_18465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NH456_18470 PF02348 Cytidylyltransferase NH456_18475 PF09115 DNA polymerase III, delta subunit, C terminal NH456_18485 PF01026 TatD related DNase