locus-tag class description AB237_0001 PF01809 Putative membrane protein insertion efficiency factor AB237_0002 PF00825 Ribonuclease P AB237_0003 PF08299 Bacterial dnaA protein helix-turn-helix AB237_0003 PF11638 DnaA N-terminal domain AB237_0003 PF00308 Bacterial dnaA protein AB237_0004 PF02768 DNA polymerase III beta subunit, C-terminal domain AB237_0004 PF02767 DNA polymerase III beta subunit, central domain AB237_0004 PF00712 DNA polymerase III beta subunit, N-terminal domain AB237_0005 PF02463 RecF/RecN/SMC N terminal domain AB237_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0006 PF18053 DNA gyrase B subunit insert domain AB237_0006 PF00986 DNA gyrase B subunit, carboxyl terminus AB237_0006 PF00204 DNA gyrase B AB237_0006 PF01751 Toprim domain AB237_0008 PF09335 SNARE associated Golgi protein AB237_0009 PF00005 ABC transporter AB237_0009 PF12848 ABC transporter AB237_0013 PF01521 Iron-sulphur cluster biosynthesis AB237_0014 PF00561 alpha/beta hydrolase fold AB237_0015 PF03702 Anhydro-N-acetylmuramic acid kinase AB237_0016 PF00579 tRNA synthetases class I (W and Y) AB237_0028 PF00209 Sodium:neurotransmitter symporter family AB237_0029 PF01029 NusB family AB237_0029 PF01189 16S rRNA methyltransferase RsmB/F AB237_0030 PF00920 Dehydratase family AB237_0033 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0033 PF03466 LysR substrate binding domain AB237_0034 PF00860 Permease family AB237_0035 PF00311 Phosphoenolpyruvate carboxylase AB237_0036 PF00440 Bacterial regulatory proteins, tetR family AB237_0036 PF08361 MAATS-type transcriptional repressor, C-terminal region AB237_0037 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB237_0038 PF00873 AcrB/AcrD/AcrF family AB237_0040 PF00684 DnaJ central domain AB237_0040 PF01556 DnaJ C terminal domain AB237_0040 PF00226 DnaJ domain AB237_0042 PF01113 Dihydrodipicolinate reductase, N-terminus AB237_0042 PF05173 Dihydrodipicolinate reductase, C-terminus AB237_0044 PF07690 Major Facilitator Superfamily AB237_0045 PF03466 LysR substrate binding domain AB237_0045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0046 PF00155 Aminotransferase class I and II AB237_0046 PF00392 Bacterial regulatory proteins, gntR family AB237_0047 PF08240 Alcohol dehydrogenase GroES-like domain AB237_0047 PF00107 Zinc-binding dehydrogenase AB237_0048 PF03352 Methyladenine glycosylase AB237_0050 PF14815 NUDIX domain AB237_0050 PF00730 HhH-GPD superfamily base excision DNA repair protein AB237_0050 PF00633 Helix-hairpin-helix motif AB237_0050 PF10576 Iron-sulfur binding domain of endonuclease III AB237_0053 PF03692 Putative zinc- or iron-chelating domain AB237_0054 PF07995 Glucose / Sorbosone dehydrogenase AB237_0055 PF12002 MgsA AAA+ ATPase C terminal AB237_0055 PF16193 AAA C-terminal domain AB237_0055 PF00004 ATPase family associated with various cellular activities (AAA) AB237_0056 PF01226 Formate/nitrite transporter AB237_0057 PF01259 SAICAR synthetase AB237_0059 PF00701 Dihydrodipicolinate synthetase family AB237_0060 PF00857 Isochorismatase family AB237_0061 PF01758 Sodium Bile acid symporter family AB237_0062 PF01554 MatE AB237_0063 PF04463 Protein of unknown function (DUF523) AB237_0064 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB237_0066 PF02798 Glutathione S-transferase, N-terminal domain AB237_0066 PF14497 Glutathione S-transferase, C-terminal domain AB237_0068 PF00324 Amino acid permease AB237_0070 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB237_0070 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB237_0072 PF07702 UTRA domain AB237_0072 PF00392 Bacterial regulatory proteins, gntR family AB237_0073 PF01175 Urocanase Rossmann-like domain AB237_0073 PF17392 Urocanase C-terminal domain AB237_0073 PF17391 Urocanase N-terminal domain AB237_0074 PF00221 Aromatic amino acid lyase AB237_0075 PF00324 Amino acid permease AB237_0076 PF01979 Amidohydrolase family AB237_0078 PF13419 Haloacid dehalogenase-like hydrolase AB237_0079 PF01177 Asp/Glu/Hydantoin racemase AB237_0085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB237_0085 PF02753 Pili assembly chaperone PapD, C-terminal domain AB237_0086 PF00577 Outer membrane usher protein AB237_0086 PF13954 PapC N-terminal domain AB237_0086 PF13953 PapC C-terminal domain AB237_0089 PF11426 Tn7 transposition regulator TnsC AB237_0089 PF13401 AAA domain AB237_0090 PF00665 Integrase core domain AB237_0091 PF01380 SIS domain AB237_0092 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_0092 PF12804 MobA-like NTP transferase domain AB237_0092 PF14602 Hexapeptide repeat of succinyl-transferase AB237_0093 PF00586 AIR synthase related protein, N-terminal domain AB237_0093 PF02769 AIR synthase related protein, C-terminal domain AB237_0094 PF01029 NusB family AB237_0095 PF00885 6,7-dimethyl-8-ribityllumazine synthase AB237_0096 PF00925 GTP cyclohydrolase II AB237_0096 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB237_0101 PF02580 D-Tyr-tRNA(Tyr) deacylase AB237_0102 PF06628 Catalase-related immune-responsive AB237_0102 PF00199 Catalase AB237_0104 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB237_0104 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AB237_0105 PF00581 Rhodanese-like domain AB237_0106 PF02666 Phosphatidylserine decarboxylase AB237_0107 PF03069 Acetamidase/Formamidase family AB237_0109 PF13936 Helix-turn-helix domain AB237_0109 PF00665 Integrase core domain AB237_0111 PF11808 Phosphate regulon sensor protein PhoR AB237_0111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0111 PF00989 PAS fold AB237_0111 PF00512 His Kinase A (phospho-acceptor) domain AB237_0112 PF00072 Response regulator receiver domain AB237_0112 PF00486 Transcriptional regulatory protein, C terminal AB237_0114 PF00106 short chain dehydrogenase AB237_0115 PF01554 MatE AB237_0116 PF00155 Aminotransferase class I and II AB237_0117 PF04286 Protein of unknown function (DUF445) AB237_0120 PF04262 Glutamate-cysteine ligase AB237_0121 PF02600 Disulfide bond formation protein DsbB AB237_0122 PF04717 Type VI secretion system, phage-baseplate injector AB237_0123 PF00182 Chitinase class I AB237_0128 PF05728 Uncharacterised protein family (UPF0227) AB237_0129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0129 PF01751 Toprim domain AB237_0129 PF00204 DNA gyrase B AB237_0129 PF00986 DNA gyrase B subunit, carboxyl terminus AB237_0130 PF04115 Ureidoglycolate lyase AB237_0131 PF03561 Allantoicase repeat AB237_0132 PF01494 FAD binding domain AB237_0134 PF00860 Permease family AB237_0140 PF02683 Cytochrome C biogenesis protein transmembrane region AB237_0140 PF11412 Disulphide bond corrector protein DsbC AB237_0142 PF07859 alpha/beta hydrolase fold AB237_0144 PF03960 ArsC family AB237_0145 PF03372 Endonuclease/Exonuclease/phosphatase family AB237_0146 PF07715 TonB-dependent Receptor Plug Domain AB237_0146 PF00593 TonB dependent receptor AB237_0147 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AB237_0147 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AB237_0148 PF04101 Glycosyltransferase family 28 C-terminal domain AB237_0148 PF03033 Glycosyltransferase family 28 N-terminal domain AB237_0149 PF08245 Mur ligase middle domain AB237_0149 PF02875 Mur ligase family, glutamate ligase domain AB237_0149 PF01225 Mur ligase family, catalytic domain AB237_0150 PF07478 D-ala D-ala ligase C-terminus AB237_0150 PF01820 D-ala D-ala ligase N-terminus AB237_0151 PF03799 Cell division protein FtsQ AB237_0151 PF08478 POTRA domain, FtsQ-type AB237_0152 PF02491 SHS2 domain inserted in FTSA AB237_0153 PF12327 FtsZ family, C-terminal domain AB237_0153 PF00091 Tubulin/FtsZ family, GTPase domain AB237_0154 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AB237_0156 PF01551 Peptidase family M23 AB237_0157 PF00456 Transketolase, thiamine diphosphate binding domain AB237_0157 PF17831 Pyruvate dehydrogenase E1 component middle domain AB237_0158 PF00364 Biotin-requiring enzyme AB237_0158 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB237_0158 PF02817 e3 binding domain AB237_0159 PF01169 Uncharacterized protein family UPF0016 AB237_0160 PF07715 TonB-dependent Receptor Plug Domain AB237_0160 PF00593 TonB dependent receptor AB237_0161 PF01613 Flavin reductase like domain AB237_0161 PF00258 Flavodoxin AB237_0162 PF03692 Putative zinc- or iron-chelating domain AB237_0163 PF00478 IMP dehydrogenase / GMP reductase domain AB237_0163 PF00571 CBS domain AB237_0164 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB237_0164 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB237_0164 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB237_0164 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB237_0165 PF01368 DHH family AB237_0165 PF02272 DHHA1 domain AB237_0165 PF17768 RecJ OB domain AB237_0167 PF00472 RF-1 domain AB237_0167 PF03462 PCRF domain AB237_0169 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB237_0170 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AB237_0171 PF00924 Mechanosensitive ion channel AB237_0173 PF16177 Acetyl-coenzyme A synthetase N-terminus AB237_0173 PF13193 AMP-binding enzyme C-terminal domain AB237_0173 PF00501 AMP-binding enzyme AB237_0174 PF00857 Isochorismatase family AB237_0175 PF01037 Lrp/AsnC ligand binding domain AB237_0176 PF00296 Luciferase-like monooxygenase AB237_0177 PF03358 NADPH-dependent FMN reductase AB237_0178 PF00196 Bacterial regulatory proteins, luxR family AB237_0178 PF00072 Response regulator receiver domain AB237_0180 PF00072 Response regulator receiver domain AB237_0180 PF00672 HAMP domain AB237_0180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0180 PF00512 His Kinase A (phospho-acceptor) domain AB237_0180 PF01627 Hpt domain AB237_0181 PF00474 Sodium:solute symporter family AB237_0183 PF02028 BCCT, betaine/carnitine/choline family transporter AB237_0185 PF00990 Diguanylate cyclase, GGDEF domain AB237_0185 PF17158 Membrane-associated sensor, integral membrane domain AB237_0186 PF17760 UvrA interaction domain AB237_0186 PF00005 ABC transporter AB237_0186 PF17755 UvrA DNA-binding domain AB237_0187 PF00440 Bacterial regulatory proteins, tetR family AB237_0187 PF16925 Tetracyclin repressor-like, C-terminal domain AB237_0188 PF00107 Zinc-binding dehydrogenase AB237_0188 PF08240 Alcohol dehydrogenase GroES-like domain AB237_0190 PF06942 GlpM protein AB237_0191 PF08543 Phosphomethylpyrimidine kinase AB237_0191 PF03070 TENA/THI-4/PQQC family AB237_0191 PF02581 Thiamine monophosphate synthase AB237_0193 PF07690 Major Facilitator Superfamily AB237_0194 PF00436 Single-strand binding protein family AB237_0195 PF03591 AzlC protein AB237_0197 PF00324 Amino acid permease AB237_0198 PF00392 Bacterial regulatory proteins, gntR family AB237_0198 PF00155 Aminotransferase class I and II AB237_0199 PF00202 Aminotransferase class-III AB237_0200 PF00171 Aldehyde dehydrogenase family AB237_0201 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0202 PF00857 Isochorismatase family AB237_0203 PF05726 Pirin C-terminal cupin domain AB237_0203 PF02678 Pirin AB237_0204 PF01593 Flavin containing amine oxidoreductase AB237_0207 PF07690 Major Facilitator Superfamily AB237_0208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0208 PF03466 LysR substrate binding domain AB237_0211 PF00248 Aldo/keto reductase family AB237_0212 PF02311 AraC-like ligand binding domain AB237_0212 PF12833 Helix-turn-helix domain AB237_0215 PF01638 HxlR-like helix-turn-helix AB237_0217 PF01638 HxlR-like helix-turn-helix AB237_0218 PF02525 Flavodoxin-like fold AB237_0222 PF12833 Helix-turn-helix domain AB237_0224 PF02705 K+ potassium transporter AB237_0228 PF00230 Major intrinsic protein AB237_0231 PF00977 Histidine biosynthesis protein AB237_0232 PF01636 Phosphotransferase enzyme family AB237_0237 PF00977 Histidine biosynthesis protein AB237_0240 PF00117 Glutamine amidotransferase class-I AB237_0241 PF00475 Imidazoleglycerol-phosphate dehydratase AB237_0245 PF00583 Acetyltransferase (GNAT) family AB237_0246 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AB237_0246 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AB237_0247 PF00512 His Kinase A (phospho-acceptor) domain AB237_0247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0247 PF00672 HAMP domain AB237_0248 PF00072 Response regulator receiver domain AB237_0248 PF00486 Transcriptional regulatory protein, C terminal AB237_0249 PF09371 Tex-like protein N-terminal domain AB237_0249 PF16921 Tex protein YqgF-like domain AB237_0249 PF17674 HHH domain AB237_0249 PF00575 S1 RNA binding domain AB237_0250 PF00916 Sulfate permease family AB237_0250 PF01740 STAS domain AB237_0251 PF00106 short chain dehydrogenase AB237_0252 PF01053 Cys/Met metabolism PLP-dependent enzyme AB237_0253 PF00005 ABC transporter AB237_0253 PF12848 ABC transporter AB237_0258 PF00873 AcrB/AcrD/AcrF family AB237_0259 PF01545 Cation efflux family AB237_0265 PF00324 Amino acid permease AB237_0268 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB237_0271 PF01795 MraW methylase family AB237_0273 PF03717 Penicillin-binding Protein dimerisation domain AB237_0273 PF00905 Penicillin binding protein transpeptidase domain AB237_0274 PF02875 Mur ligase family, glutamate ligase domain AB237_0274 PF01225 Mur ligase family, catalytic domain AB237_0274 PF08245 Mur ligase middle domain AB237_0275 PF01225 Mur ligase family, catalytic domain AB237_0275 PF02875 Mur ligase family, glutamate ligase domain AB237_0275 PF08245 Mur ligase middle domain AB237_0276 PF00953 Glycosyl transferase family 4 AB237_0278 PF13847 Methyltransferase domain AB237_0279 PF17092 Penicillin-binding protein OB-like domain AB237_0279 PF00905 Penicillin binding protein transpeptidase domain AB237_0279 PF00912 Transglycosylase AB237_0283 PF07660 Secretin and TonB N terminus short domain AB237_0283 PF03958 Bacterial type II/III secretion system short domain AB237_0283 PF11741 AMIN domain AB237_0283 PF00263 Bacterial type II and III secretion system protein AB237_0284 PF01202 Shikimate kinase AB237_0285 PF01761 3-dehydroquinate synthase AB237_0288 PF01645 Conserved region in glutamate synthase AB237_0288 PF04898 Glutamate synthase central domain AB237_0288 PF01493 GXGXG motif AB237_0288 PF00310 Glutamine amidotransferases class-II AB237_0289 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AB237_0289 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_0291 PF04011 LemA family AB237_0292 PF04536 TPM domain AB237_0293 PF00114 Pilin (bacterial filament) AB237_0293 PF07963 Prokaryotic N-terminal methylation motif AB237_0294 PF11846 Virulence factor membrane-bound polymerase, C-terminal AB237_0294 PF04932 O-Antigen ligase AB237_0294 PF15864 Protein glycosylation ligase AB237_0295 PF00210 Ferritin-like domain AB237_0298 PF01042 Endoribonuclease L-PSP AB237_0299 PF02824 TGS domain AB237_0299 PF13291 ACT domain AB237_0299 PF04607 Region found in RelA / SpoT proteins AB237_0300 PF01192 RNA polymerase Rpb6 AB237_0301 PF00625 Guanylate kinase AB237_0302 PF02401 LytB protein AB237_0307 PF00886 Ribosomal protein S16 AB237_0308 PF01782 RimM N-terminal domain AB237_0308 PF05239 PRC-barrel domain AB237_0309 PF01746 tRNA (Guanine-1)-methyltransferase AB237_0310 PF01245 Ribosomal protein L19 AB237_0311 PF00561 alpha/beta hydrolase fold AB237_0312 PF03280 Proteobacterial lipase chaperone protein AB237_0313 PF16198 tRNA pseudouridylate synthase B C-terminal domain AB237_0313 PF01509 TruB family pseudouridylate synthase (N terminal domain) AB237_0313 PF09157 Pseudouridine synthase II TruB, C-terminal AB237_0314 PF01925 Sulfite exporter TauE/SafE AB237_0316 PF00892 EamA-like transporter family AB237_0317 PF00892 EamA-like transporter family AB237_0318 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB237_0318 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB237_0319 PF02913 FAD linked oxidases, C-terminal domain AB237_0319 PF01565 FAD binding domain AB237_0321 PF02525 Flavodoxin-like fold AB237_0323 PF07690 Major Facilitator Superfamily AB237_0324 PF12805 FUSC-like inner membrane protein yccS AB237_0325 PF00080 Copper/zinc superoxide dismutase (SODC) AB237_0326 PF00665 Integrase core domain AB237_0326 PF13936 Helix-turn-helix domain AB237_0327 PF01594 AI-2E family transporter AB237_0328 PF13614 AAA domain AB237_0334 PF00324 Amino acid permease AB237_0335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB237_0335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB237_0336 PF00202 Aminotransferase class-III AB237_0337 PF04958 Arginine N-succinyltransferase beta subunit AB237_0338 PF00171 Aldehyde dehydrogenase family AB237_0339 PF04996 Succinylarginine dihydrolase AB237_0340 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AB237_0346 PF03466 LysR substrate binding domain AB237_0346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0347 PF00892 EamA-like transporter family AB237_0348 PF02092 Glycyl-tRNA synthetase beta subunit AB237_0348 PF05746 DALR anticodon binding domain AB237_0349 PF02091 Glycyl-tRNA synthetase alpha subunit AB237_0354 PF00571 CBS domain AB237_0356 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_0356 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_0356 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB237_0356 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_0358 PF01488 Shikimate / quinate 5-dehydrogenase AB237_0358 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AB237_0358 PF08501 Shikimate dehydrogenase substrate binding domain AB237_0359 PF01218 Coproporphyrinogen III oxidase AB237_0360 PF00925 GTP cyclohydrolase II AB237_0361 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AB237_0361 PF02779 Transketolase, pyrimidine binding domain AB237_0361 PF02780 Transketolase, C-terminal domain AB237_0362 PF00459 Inositol monophosphatase family AB237_0363 PF00270 DEAD/DEAH box helicase AB237_0363 PF12343 Cold shock protein DEAD box A AB237_0363 PF00271 Helicase conserved C-terminal domain AB237_0363 PF03880 DbpA RNA binding domain AB237_0364 PF00005 ABC transporter AB237_0365 PF02405 Permease MlaE AB237_0367 PF05494 MlaC protein AB237_0368 PF01544 CorA-like Mg2+ transporter protein AB237_0369 PF03641 Possible lysine decarboxylase AB237_0370 PF00293 NUDIX domain AB237_0371 PF00270 DEAD/DEAH box helicase AB237_0371 PF00271 Helicase conserved C-terminal domain AB237_0371 PF17191 RecG wedge domain AB237_0374 PF01553 Acyltransferase AB237_0376 PF00375 Sodium:dicarboxylate symporter family AB237_0378 PF01926 50S ribosome-binding GTPase AB237_0379 PF02082 Transcriptional regulator AB237_0380 PF00175 Oxidoreductase NAD-binding domain AB237_0380 PF00970 Oxidoreductase FAD-binding domain AB237_0380 PF00042 Globin AB237_0381 PF05872 Bacterial protein of unknown function (DUF853) AB237_0382 PF01053 Cys/Met metabolism PLP-dependent enzyme AB237_0383 PF00117 Glutamine amidotransferase class-I AB237_0384 PF00338 Ribosomal protein S10p/S20e AB237_0385 PF00297 Ribosomal protein L3 AB237_0386 PF00573 Ribosomal protein L4/L1 family AB237_0387 PF00181 Ribosomal Proteins L2, RNA binding domain AB237_0387 PF03947 Ribosomal Proteins L2, C-terminal domain AB237_0388 PF00237 Ribosomal protein L22p/L17e AB237_0389 PF07650 KH domain AB237_0389 PF00189 Ribosomal protein S3, C-terminal domain AB237_0390 PF00252 Ribosomal protein L16p/L10e AB237_0391 PF00238 Ribosomal protein L14p/L23e AB237_0392 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AB237_0392 PF00467 KOW motif AB237_0393 PF00673 ribosomal L5P family C-terminus AB237_0393 PF00281 Ribosomal protein L5 AB237_0394 PF00253 Ribosomal protein S14p/S29e AB237_0395 PF00410 Ribosomal protein S8 AB237_0396 PF00347 Ribosomal protein L6 AB237_0397 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AB237_0398 PF00333 Ribosomal protein S5, N-terminal domain AB237_0398 PF03719 Ribosomal protein S5, C-terminal domain AB237_0399 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AB237_0400 PF00344 SecY translocase AB237_0401 PF00416 Ribosomal protein S13/S18 AB237_0402 PF00411 Ribosomal protein S11 AB237_0403 PF00163 Ribosomal protein S4/S9 N-terminal domain AB237_0403 PF01479 S4 domain AB237_0404 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AB237_0404 PF01000 RNA polymerase Rpb3/RpoA insert domain AB237_0404 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AB237_0405 PF01196 Ribosomal protein L17 AB237_0406 PF00743 Flavin-binding monooxygenase-like AB237_0407 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_0407 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_0407 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_0413 PF01432 Peptidase family M3 AB237_0414 PF00773 RNB domain AB237_0414 PF17876 Cold shock domain AB237_0414 PF08206 Ribonuclease B OB domain AB237_0414 PF08461 Ribonuclease R winged-helix domain AB237_0414 PF00575 S1 RNA binding domain AB237_0423 PF01557 Fumarylacetoacetate (FAA) hydrolase family AB237_0424 PF12833 Helix-turn-helix domain AB237_0425 PF00892 EamA-like transporter family AB237_0426 PF03631 Virulence factor BrkB AB237_0427 PF03358 NADPH-dependent FMN reductase AB237_0432 PF02130 Uncharacterized protein family UPF0054 AB237_0433 PF02562 PhoH-like protein AB237_0434 PF01938 TRAM domain AB237_0434 PF00919 Uncharacterized protein family UPF0004 AB237_0434 PF04055 Radical SAM superfamily AB237_0435 PF01551 Peptidase family M23 AB237_0435 PF10145 Phage-related minor tail protein AB237_0435 PF01464 Transglycosylase SLT domain AB237_0437 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AB237_0437 PF00056 lactate/malate dehydrogenase, NAD binding domain AB237_0441 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AB237_0442 PF01066 CDP-alcohol phosphatidyltransferase AB237_0455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_0455 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_0455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_0456 PF00440 Bacterial regulatory proteins, tetR family AB237_0456 PF17932 Tetracyclin repressor-like, C-terminal domain AB237_0459 PF01039 Carboxyl transferase domain AB237_0460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_0460 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_0460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_0462 PF00289 Biotin carboxylase, N-terminal domain AB237_0462 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB237_0462 PF02785 Biotin carboxylase C-terminal domain AB237_0462 PF00364 Biotin-requiring enzyme AB237_0464 PF04386 Stringent starvation protein B AB237_0465 PF13417 Glutathione S-transferase, N-terminal domain AB237_0465 PF00043 Glutathione S-transferase, C-terminal domain AB237_0466 PF00380 Ribosomal protein S9/S16 AB237_0467 PF00572 Ribosomal protein L13 AB237_0468 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AB237_0469 PF00398 Ribosomal RNA adenine dimethylase AB237_0470 PF00149 Calcineurin-like phosphoesterase AB237_0473 PF01926 50S ribosome-binding GTPase AB237_0473 PF13167 GTP-binding GTPase N-terminal AB237_0473 PF16360 GTP-binding GTPase Middle Region AB237_0475 PF13091 PLD-like domain AB237_0476 PF10518 TAT (twin-arginine translocation) pathway signal sequence AB237_0476 PF00149 Calcineurin-like phosphoesterase AB237_0477 PF00691 OmpA family AB237_0477 PF01389 OmpA-like transmembrane domain AB237_0478 PF17152 Periplasmic sensor domain AB237_0478 PF00990 Diguanylate cyclase, GGDEF domain AB237_0479 PF13936 Helix-turn-helix domain AB237_0479 PF00665 Integrase core domain AB237_0490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB237_0490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_0492 PF04273 Putative phosphatase (DUF442) AB237_0492 PF00753 Metallo-beta-lactamase superfamily AB237_0493 PF00561 alpha/beta hydrolase fold AB237_0494 PF00085 Thioredoxin AB237_0495 PF03061 Thioesterase superfamily AB237_0497 PF04461 Protein of unknown function (DUF520) AB237_0499 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AB237_0499 PF01266 FAD dependent oxidoreductase AB237_0500 PF02811 PHP domain AB237_0501 PF01062 Bestrophin, RFP-TM, chloride channel AB237_0502 PF04002 RadC-like JAB domain AB237_0503 PF04127 DNA / pantothenate metabolism flavoprotein AB237_0503 PF02441 Flavoprotein AB237_0504 PF07549 SecD/SecF GG Motif AB237_0504 PF02355 Protein export membrane protein AB237_0505 PF02355 Protein export membrane protein AB237_0505 PF13721 SecD export protein N-terminal TM region AB237_0505 PF07549 SecD/SecF GG Motif AB237_0506 PF02699 Preprotein translocase subunit AB237_0507 PF01702 Queuine tRNA-ribosyltransferase AB237_0510 PF02547 Queuosine biosynthesis protein AB237_0512 PF00512 His Kinase A (phospho-acceptor) domain AB237_0512 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0512 PF07689 KaiB domain AB237_0513 PF03710 Glutamate-ammonia ligase adenylyltransferase AB237_0513 PF08335 GlnD PII-uridylyltransferase AB237_0514 PF01063 Amino-transferase class IV AB237_0517 PF00535 Glycosyl transferase family 2 AB237_0518 PF13439 Glycosyltransferase Family 4 AB237_0518 PF00534 Glycosyl transferases group 1 AB237_0521 PF11380 Stealth protein CR2, conserved region 2 AB237_0521 PF17101 Stealth protein CR1, conserved region 1 AB237_0521 PF17102 Stealth protein CR3, conserved region 3 AB237_0522 PF02938 GAD domain AB237_0522 PF01336 OB-fold nucleic acid binding domain AB237_0522 PF00152 tRNA synthetases class II (D, K and N) AB237_0524 PF00593 TonB dependent receptor AB237_0524 PF07715 TonB-dependent Receptor Plug Domain AB237_0528 PF06146 Phosphate-starvation-inducible E AB237_0529 PF02798 Glutathione S-transferase, N-terminal domain AB237_0529 PF00043 Glutathione S-transferase, C-terminal domain AB237_0530 PF03466 LysR substrate binding domain AB237_0530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0531 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_0531 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_0531 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_0531 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB237_0532 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_0532 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_0532 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB237_0532 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_0534 PF00672 HAMP domain AB237_0534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0534 PF00512 His Kinase A (phospho-acceptor) domain AB237_0535 PF00072 Response regulator receiver domain AB237_0535 PF00486 Transcriptional regulatory protein, C terminal AB237_0536 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AB237_0540 PF01923 Cobalamin adenosyltransferase AB237_0541 PF00593 TonB dependent receptor AB237_0541 PF07715 TonB-dependent Receptor Plug Domain AB237_0542 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AB237_0543 PF00291 Pyridoxal-phosphate dependent enzyme AB237_0548 PF01039 Carboxyl transferase domain AB237_0549 PF02875 Mur ligase family, glutamate ligase domain AB237_0549 PF08245 Mur ligase middle domain AB237_0552 PF00753 Metallo-beta-lactamase superfamily AB237_0553 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB237_0553 PF00578 AhpC/TSA family AB237_0554 PF07516 SecA Wing and Scaffold domain AB237_0554 PF02810 SEC-C motif AB237_0554 PF07517 SecA DEAD-like domain AB237_0554 PF01043 SecA preprotein cross-linking domain AB237_0556 PF07690 Major Facilitator Superfamily AB237_0556 PF00083 Sugar (and other) transporter AB237_0557 PF03006 Haemolysin-III related AB237_0561 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB237_0561 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB237_0561 PF00378 Enoyl-CoA hydratase/isomerase AB237_0562 PF02803 Thiolase, C-terminal domain AB237_0562 PF00108 Thiolase, N-terminal domain AB237_0563 PF12833 Helix-turn-helix domain AB237_0563 PF02311 AraC-like ligand binding domain AB237_0564 PF02515 CoA-transferase family III AB237_0565 PF04966 Carbohydrate-selective porin, OprB family AB237_0566 PF01011 PQQ enzyme repeat AB237_0567 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB237_0567 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB237_0568 PF00893 Small Multidrug Resistance protein AB237_0570 PF00108 Thiolase, N-terminal domain AB237_0570 PF02803 Thiolase, C-terminal domain AB237_0572 PF13505 Outer membrane protein beta-barrel domain AB237_0572 PF00691 OmpA family AB237_0573 PF01139 tRNA-splicing ligase RtcB AB237_0574 PF00324 Amino acid permease AB237_0575 PF05175 Methyltransferase small domain AB237_0575 PF08468 Methyltransferase small domain N-terminal AB237_0576 PF00860 Permease family AB237_0578 PF01741 Large-conductance mechanosensitive channel, MscL AB237_0580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AB237_0580 PF06827 Zinc finger found in FPG and IleRS AB237_0580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AB237_0581 PF02245 Methylpurine-DNA glycosylase (MPG) AB237_0582 PF07715 TonB-dependent Receptor Plug Domain AB237_0582 PF00593 TonB dependent receptor AB237_0585 PF00593 TonB dependent receptor AB237_0585 PF07715 TonB-dependent Receptor Plug Domain AB237_0586 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB237_0587 PF03547 Membrane transport protein AB237_0589 PF10411 Disulfide bond isomerase protein N-terminus AB237_0589 PF13098 Thioredoxin-like domain AB237_0590 PF01571 Aminomethyltransferase folate-binding domain AB237_0592 PF04343 Protein of unknown function, DUF488 AB237_0593 PF08274 PhnA Zinc-Ribbon AB237_0593 PF03831 PhnA domain AB237_0594 PF07411 Domain of unknown function (DUF1508) AB237_0595 PF03129 Anticodon binding domain AB237_0595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB237_0595 PF04073 Aminoacyl-tRNA editing domain AB237_0596 PF00873 AcrB/AcrD/AcrF family AB237_0599 PF00072 Response regulator receiver domain AB237_0600 PF00072 Response regulator receiver domain AB237_0601 PF01584 CheW-like domain AB237_0602 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AB237_0602 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AB237_0603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0603 PF01584 CheW-like domain AB237_0603 PF00072 Response regulator receiver domain AB237_0603 PF01627 Hpt domain AB237_0604 PF01546 Peptidase family M20/M25/M40 AB237_0604 PF07687 Peptidase dimerisation domain AB237_0606 PF04304 Protein of unknown function (DUF454) AB237_0607 PF03734 L,D-transpeptidase catalytic domain AB237_0607 PF17969 L,D-transpeptidase C-terminal domain AB237_0616 PF00175 Oxidoreductase NAD-binding domain AB237_0616 PF00667 FAD binding domain AB237_0616 PF00258 Flavodoxin AB237_0618 PF12805 FUSC-like inner membrane protein yccS AB237_0619 PF07690 Major Facilitator Superfamily AB237_0620 PF00881 Nitroreductase family AB237_0622 PF01235 Sodium:alanine symporter family AB237_0623 PF01734 Patatin-like phospholipase AB237_0624 PF00291 Pyridoxal-phosphate dependent enzyme AB237_0624 PF13291 ACT domain AB237_0625 PF05992 SbmA/BacA-like family AB237_0631 PF02934 GatB/GatE catalytic domain AB237_0631 PF02637 GatB domain AB237_0632 PF01425 Amidase AB237_0633 PF02686 Glu-tRNAGln amidotransferase C subunit AB237_0635 PF04085 rod shape-determining protein MreC AB237_0637 PF02545 Maf-like protein AB237_0638 PF10150 Ribonuclease E/G family AB237_0638 PF00575 S1 RNA binding domain AB237_0639 PF06974 Protein of unknown function (DUF1298) AB237_0639 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AB237_0640 PF01507 Phosphoadenosine phosphosulfate reductase family AB237_0643 PF02525 Flavodoxin-like fold AB237_0647 PF02673 Bacitracin resistance protein BacA AB237_0648 PF08990 Erythronolide synthase docking AB237_0648 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_0648 PF08659 KR domain AB237_0648 PF09277 Erythronolide synthase, docking AB237_0648 PF00698 Acyl transferase domain AB237_0648 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_0648 PF08240 Alcohol dehydrogenase GroES-like domain AB237_0648 PF00550 Phosphopantetheine attachment site AB237_0648 PF14765 Polyketide synthase dehydratase AB237_0648 PF16197 Ketoacyl-synthetase C-terminal extension AB237_0649 PF01965 DJ-1/PfpI family AB237_0651 PF00324 Amino acid permease AB237_0652 PF04303 PrpF protein AB237_0653 PF00348 Polyprenyl synthetase AB237_0654 PF04237 YjbR AB237_0655 PF01145 SPFH domain / Band 7 family AB237_0657 PF01734 Patatin-like phospholipase AB237_0661 PF08019 Phosphoethanolamine transferase EptA/EptB AB237_0661 PF00884 Sulfatase AB237_0662 PF00072 Response regulator receiver domain AB237_0662 PF00486 Transcriptional regulatory protein, C terminal AB237_0663 PF00512 His Kinase A (phospho-acceptor) domain AB237_0663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_0663 PF08521 Two-component sensor kinase N-terminal AB237_0665 PF00909 Ammonium Transporter Family AB237_0666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0666 PF03466 LysR substrate binding domain AB237_0670 PF10458 Valyl tRNA synthetase tRNA binding arm AB237_0670 PF00133 tRNA synthetases class I (I, L, M and V) AB237_0670 PF08264 Anticodon-binding domain of tRNA AB237_0674 PF01906 Putative heavy-metal-binding AB237_0675 PF01906 Putative heavy-metal-binding AB237_0676 PF00873 AcrB/AcrD/AcrF family AB237_0677 PF00529 HlyD membrane-fusion protein of T1SS AB237_0677 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB237_0678 PF01569 PAP2 superfamily AB237_0680 PF00348 Polyprenyl synthetase AB237_0681 PF00829 Ribosomal prokaryotic L21 protein AB237_0682 PF03548 Outer membrane lipoprotein carrier protein LolA AB237_0684 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB237_0684 PF02403 Seryl-tRNA synthetase N-terminal domain AB237_0685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB237_0685 PF10414 Sirohaem synthase dimerisation region AB237_0685 PF14824 Sirohaem biosynthesis protein central AB237_0686 PF00588 SpoU rRNA Methylase family AB237_0687 PF01638 HxlR-like helix-turn-helix AB237_0688 PF03358 NADPH-dependent FMN reductase AB237_0689 PF13520 Amino acid permease AB237_0690 PF00465 Iron-containing alcohol dehydrogenase AB237_0692 PF03099 Biotin/lipoate A/B protein ligase family AB237_0693 PF04359 Protein of unknown function (DUF493) AB237_0694 PF04542 Sigma-70 region 2 AB237_0694 PF04546 Sigma-70, non-essential region AB237_0694 PF03979 Sigma-70 factor, region 1.1 AB237_0694 PF00140 Sigma-70 factor, region 1.2 AB237_0694 PF04545 Sigma-70, region 4 AB237_0694 PF04539 Sigma-70 region 3 AB237_0699 PF00285 Citrate synthase, C-terminal domain AB237_0700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB237_0701 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AB237_0702 PF02910 Fumarate reductase flavoprotein C-term AB237_0702 PF00890 FAD binding domain AB237_0703 PF13085 2Fe-2S iron-sulfur cluster binding domain AB237_0704 PF16078 2-oxoglutarate dehydrogenase N-terminus AB237_0704 PF00676 Dehydrogenase E1 component AB237_0704 PF16870 2-oxoglutarate dehydrogenase C-terminal AB237_0704 PF02779 Transketolase, pyrimidine binding domain AB237_0705 PF02817 e3 binding domain AB237_0705 PF00364 Biotin-requiring enzyme AB237_0705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB237_0706 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB237_0706 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_0707 PF08442 ATP-grasp domain AB237_0707 PF00549 CoA-ligase AB237_0708 PF00549 CoA-ligase AB237_0708 PF02629 CoA binding domain AB237_0709 PF00579 tRNA synthetases class I (W and Y) AB237_0710 PF05661 Protein of unknown function (DUF808) AB237_0711 PF04228 Putative neutral zinc metallopeptidase AB237_0712 PF00999 Sodium/hydrogen exchanger family AB237_0715 PF09587 Bacterial capsule synthesis protein PGA_cap AB237_0716 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB237_0717 PF00582 Universal stress protein family AB237_0718 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_0719 PF03449 Transcription elongation factor, N-terminal AB237_0719 PF01272 Transcription elongation factor, GreA/GreB, C-term AB237_0720 PF02142 MGS-like domain AB237_0720 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB237_0720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB237_0721 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AB237_0721 PF00117 Glutamine amidotransferase class-I AB237_0724 PF01985 CRS1 / YhbY (CRM) domain AB237_0725 PF01728 FtsJ-like methyltransferase AB237_0726 PF01434 Peptidase family M41 AB237_0726 PF17862 AAA+ lid domain AB237_0726 PF06480 FtsH Extracellular AB237_0726 PF00004 ATPase family associated with various cellular activities (AAA) AB237_0727 PF00809 Pterin binding enzyme AB237_0731 PF16655 PhoD-like phosphatase, N-terminal domain AB237_0731 PF09423 PhoD-like phosphatase AB237_0734 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AB237_0734 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AB237_0737 PF00083 Sugar (and other) transporter AB237_0738 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB237_0738 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB237_0739 PF01266 FAD dependent oxidoreductase AB237_0739 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AB237_0740 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AB237_0740 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AB237_0741 PF00781 Diacylglycerol kinase catalytic domain AB237_0743 PF00166 Chaperonin 10 Kd subunit AB237_0744 PF00118 TCP-1/cpn60 chaperonin family AB237_0745 PF01219 Prokaryotic diacylglycerol kinase AB237_0747 PF03009 Glycerophosphoryl diester phosphodiesterase family AB237_0748 PF00873 AcrB/AcrD/AcrF family AB237_0750 PF01435 Peptidase family M48 AB237_0751 PF01464 Transglycosylase SLT domain AB237_0752 PF01171 PP-loop family AB237_0754 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB237_0754 PF01464 Transglycosylase SLT domain AB237_0755 PF03449 Transcription elongation factor, N-terminal AB237_0755 PF01272 Transcription elongation factor, GreA/GreB, C-term AB237_0758 PF00975 Thioesterase domain AB237_0758 PF13193 AMP-binding enzyme C-terminal domain AB237_0758 PF00501 AMP-binding enzyme AB237_0758 PF00668 Condensation domain AB237_0758 PF00550 Phosphopantetheine attachment site AB237_0759 PF00665 Integrase core domain AB237_0759 PF13936 Helix-turn-helix domain AB237_0765 PF00881 Nitroreductase family AB237_0768 PF02595 Glycerate kinase family AB237_0769 PF00384 Molybdopterin oxidoreductase AB237_0770 PF02634 FdhD/NarQ family AB237_0771 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB237_0771 PF11890 Domain of unknown function (DUF3410) AB237_0771 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB237_0772 PF00152 tRNA synthetases class II (D, K and N) AB237_0774 PF18073 Rubredoxin metal binding domain AB237_0775 PF00324 Amino acid permease AB237_0777 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AB237_0777 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AB237_0778 PF01678 Diaminopimelate epimerase AB237_0779 PF01810 LysE type translocator AB237_0780 PF02899 Phage integrase, N-terminal SAM-like domain AB237_0780 PF00589 Phage integrase family AB237_0781 PF01012 Electron transfer flavoprotein domain AB237_0782 PF00766 Electron transfer flavoprotein FAD-binding domain AB237_0782 PF01012 Electron transfer flavoprotein domain AB237_0783 PF03989 DNA gyrase C-terminal domain, beta-propeller AB237_0783 PF00521 DNA gyrase/topoisomerase IV, subunit A AB237_0786 PF00535 Glycosyl transferase family 2 AB237_0789 PF13533 Biotin-lipoyl like AB237_0791 PF00266 Aminotransferase class-V AB237_0793 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AB237_0795 PF12704 MacB-like periplasmic core domain AB237_0795 PF02687 FtsX-like permease family AB237_0796 PF00005 ABC transporter AB237_0798 PF13936 Helix-turn-helix domain AB237_0798 PF00665 Integrase core domain AB237_0799 PF03772 Competence protein AB237_0799 PF00753 Metallo-beta-lactamase superfamily AB237_0799 PF13567 Domain of unknown function (DUF4131) AB237_0800 PF06965 Na+/H+ antiporter 1 AB237_0800 PF01343 Peptidase family S49 AB237_0801 PF12697 Alpha/beta hydrolase family AB237_0802 PF00551 Formyl transferase AB237_0803 PF02769 AIR synthase related protein, C-terminal domain AB237_0803 PF00586 AIR synthase related protein, N-terminal domain AB237_0804 PF01594 AI-2E family transporter AB237_0805 PF11638 DnaA N-terminal domain AB237_0805 PF00308 Bacterial dnaA protein AB237_0805 PF08299 Bacterial dnaA protein helix-turn-helix AB237_0810 PF00588 SpoU rRNA Methylase family AB237_0810 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB237_0811 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AB237_0813 PF00691 OmpA family AB237_0814 PF07676 WD40-like Beta Propeller Repeat AB237_0814 PF04052 TolB amino-terminal domain AB237_0816 PF02472 Biopolymer transport protein ExbD/TolR AB237_0817 PF01618 MotA/TolQ/ExbB proton channel family AB237_0818 PF03061 Thioesterase superfamily AB237_0819 PF01546 Peptidase family M20/M25/M40 AB237_0819 PF07687 Peptidase dimerisation domain AB237_0820 PF05496 Holliday junction DNA helicase RuvB P-loop domain AB237_0820 PF17864 RuvB AAA lid domain AB237_0820 PF05491 RuvB C-terminal winged helix domain AB237_0821 PF01330 RuvA N terminal domain AB237_0821 PF07499 RuvA, C-terminal domain AB237_0822 PF01966 HD domain AB237_0823 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AB237_0823 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AB237_0823 PF02769 AIR synthase related protein, C-terminal domain AB237_0824 PF07690 Major Facilitator Superfamily AB237_0825 PF00378 Enoyl-CoA hydratase/isomerase AB237_0826 PF00293 NUDIX domain AB237_0826 PF01467 Cytidylyltransferase-like AB237_0828 PF00578 AhpC/TSA family AB237_0831 PF06508 Queuosine biosynthesis protein QueC AB237_0833 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AB237_0833 PF14602 Hexapeptide repeat of succinyl-transferase AB237_0833 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_0835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0835 PF03466 LysR substrate binding domain AB237_0836 PF00005 ABC transporter AB237_0836 PF12857 TOBE-like domain AB237_0837 PF00528 Binding-protein-dependent transport system inner membrane component AB237_0838 PF00528 Binding-protein-dependent transport system inner membrane component AB237_0841 PF01063 Amino-transferase class IV AB237_0842 PF02618 YceG-like family AB237_0843 PF02223 Thymidylate kinase AB237_0845 PF00890 FAD binding domain AB237_0845 PF02910 Fumarate reductase flavoprotein C-term AB237_0846 PF13180 PDZ domain AB237_0848 PF00009 Elongation factor Tu GTP binding domain AB237_0848 PF06421 GTP-binding protein LepA C-terminus AB237_0848 PF03144 Elongation factor Tu domain 2 AB237_0848 PF00679 Elongation factor G C-terminus AB237_0849 PF10502 Signal peptidase, peptidase S26 AB237_0850 PF14622 Ribonuclease-III-like AB237_0850 PF00035 Double-stranded RNA binding motif AB237_0851 PF01926 50S ribosome-binding GTPase AB237_0851 PF07650 KH domain AB237_0852 PF11967 Recombination protein O N terminal AB237_0852 PF02565 Recombination protein O C terminal AB237_0853 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AB237_0854 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AB237_0855 PF00106 short chain dehydrogenase AB237_0862 PF00990 Diguanylate cyclase, GGDEF domain AB237_0862 PF17151 Periplasmic sensor domain AB237_0864 PF12344 Ultra-violet resistance protein B AB237_0864 PF02151 UvrB/uvrC motif AB237_0864 PF00271 Helicase conserved C-terminal domain AB237_0864 PF17757 UvrB interaction domain AB237_0864 PF04851 Type III restriction enzyme, res subunit AB237_0866 PF00892 EamA-like transporter family AB237_0867 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB237_0867 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB237_0870 PF01926 50S ribosome-binding GTPase AB237_0870 PF01018 GTP1/OBG AB237_0871 PF01472 PUA domain AB237_0871 PF00696 Amino acid kinase family AB237_0873 PF01207 Dihydrouridine synthase (Dus) AB237_0874 PF03060 Nitronate monooxygenase AB237_0877 PF02350 UDP-N-acetylglucosamine 2-epimerase AB237_0881 PF00875 DNA photolyase AB237_0881 PF03441 FAD binding domain of DNA photolyase AB237_0882 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB237_0883 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_0884 PF07943 Penicillin-binding protein 5, C-terminal domain AB237_0884 PF00768 D-alanyl-D-alanine carboxypeptidase AB237_0886 PF03971 Monomeric isocitrate dehydrogenase AB237_0887 PF00849 RNA pseudouridylate synthase AB237_0888 PF00180 Isocitrate/isopropylmalate dehydrogenase AB237_0891 PF06779 Uncharacterised MFS-type transporter YbfB AB237_0892 PF03466 LysR substrate binding domain AB237_0892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0894 PF02567 Phenazine biosynthesis-like protein AB237_0895 PF05193 Peptidase M16 inactive domain AB237_0895 PF00675 Insulinase (Peptidase family M16) AB237_0900 PF02581 Thiamine monophosphate synthase AB237_0901 PF00202 Aminotransferase class-III AB237_0903 PF00849 RNA pseudouridylate synthase AB237_0904 PF12137 RNA polymerase recycling family C-terminal AB237_0904 PF00271 Helicase conserved C-terminal domain AB237_0904 PF18337 RapA N-terminal Tudor like domain AB237_0904 PF18339 RapA N-terminal Tudor like domain 1 AB237_0904 PF00176 SNF2 family N-terminal domain AB237_0906 PF00440 Bacterial regulatory proteins, tetR family AB237_0907 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_0907 PF00175 Oxidoreductase NAD-binding domain AB237_0907 PF00970 Oxidoreductase FAD-binding domain AB237_0908 PF00487 Fatty acid desaturase AB237_0910 PF00440 Bacterial regulatory proteins, tetR family AB237_0910 PF17754 MftR C-terminal domain AB237_0912 PF00202 Aminotransferase class-III AB237_0913 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB237_0914 PF00171 Aldehyde dehydrogenase family AB237_0915 PF01037 Lrp/AsnC ligand binding domain AB237_0916 PF00205 Thiamine pyrophosphate enzyme, central domain AB237_0916 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB237_0916 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB237_0917 PF00324 Amino acid permease AB237_0918 PF12849 PBP superfamily domain AB237_0919 PF00528 Binding-protein-dependent transport system inner membrane component AB237_0920 PF00528 Binding-protein-dependent transport system inner membrane component AB237_0921 PF00005 ABC transporter AB237_0922 PF01343 Peptidase family S49 AB237_0922 PF08496 Peptidase family S49 N-terminal AB237_0925 PF08328 Adenylosuccinate lyase C-terminal AB237_0925 PF00206 Lyase AB237_0927 PF00293 NUDIX domain AB237_0927 PF13344 Haloacid dehalogenase-like hydrolase AB237_0928 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_0929 PF07943 Penicillin-binding protein 5, C-terminal domain AB237_0929 PF00768 D-alanyl-D-alanine carboxypeptidase AB237_0932 PF13936 Helix-turn-helix domain AB237_0932 PF00665 Integrase core domain AB237_0933 PF01975 Survival protein SurE AB237_0934 PF01551 Peptidase family M23 AB237_0934 PF01476 LysM domain AB237_0935 PF03466 LysR substrate binding domain AB237_0935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0936 PF13654 AAA domain AB237_0936 PF05362 Lon protease (S16) C-terminal proteolytic domain AB237_0937 PF07690 Major Facilitator Superfamily AB237_0938 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB237_0939 PF13593 SBF-like CPA transporter family (DUF4137) AB237_0944 PF00216 Bacterial DNA-binding protein AB237_0947 PF13401 AAA domain AB237_0947 PF01471 Putative peptidoglycan binding domain AB237_0951 PF10502 Signal peptidase, peptidase S26 AB237_0955 PF03237 Terminase-like family AB237_0956 PF06074 Protein of unknown function (DUF935) AB237_0957 PF04233 Phage Mu protein F like protein AB237_0959 PF10124 Mu-like prophage major head subunit gpT AB237_0975 PF04055 Radical SAM superfamily AB237_0976 PF08207 Elongation factor P (EF-P) KOW-like domain AB237_0976 PF01132 Elongation factor P (EF-P) OB domain AB237_0976 PF09285 Elongation factor P, C-terminal AB237_0977 PF13722 5TM C-terminal transporter carbon starvation CstA AB237_0977 PF02554 Carbon starvation protein CstA AB237_0983 PF06018 CodY GAF-like domain AB237_0983 PF17853 GGDEF-like domain AB237_0983 PF13556 PucR C-terminal helix-turn-helix domain AB237_0986 PF00171 Aldehyde dehydrogenase family AB237_0987 PF00324 Amino acid permease AB237_0988 PF03466 LysR substrate binding domain AB237_0988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_0989 PF02028 BCCT, betaine/carnitine/choline family transporter AB237_0990 PF02028 BCCT, betaine/carnitine/choline family transporter AB237_0992 PF18113 Rubredoxin binding C-terminal domain AB237_0992 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_0993 PF01266 FAD dependent oxidoreductase AB237_0993 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AB237_0997 PF00892 EamA-like transporter family AB237_0999 PF00083 Sugar (and other) transporter AB237_1000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB237_1000 PF13378 Enolase C-terminal domain-like AB237_1001 PF14765 Polyketide synthase dehydratase AB237_1001 PF00550 Phosphopantetheine attachment site AB237_1001 PF08990 Erythronolide synthase docking AB237_1001 PF09277 Erythronolide synthase, docking AB237_1001 PF00698 Acyl transferase domain AB237_1001 PF16197 Ketoacyl-synthetase C-terminal extension AB237_1001 PF08240 Alcohol dehydrogenase GroES-like domain AB237_1001 PF08659 KR domain AB237_1001 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_1001 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_1002 PF00440 Bacterial regulatory proteins, tetR family AB237_1005 PF02678 Pirin AB237_1005 PF17954 Quercetinase C-terminal cupin domain AB237_1006 PF00291 Pyridoxal-phosphate dependent enzyme AB237_1007 PF00291 Pyridoxal-phosphate dependent enzyme AB237_1009 PF00550 Phosphopantetheine attachment site AB237_1009 PF13193 AMP-binding enzyme C-terminal domain AB237_1009 PF00501 AMP-binding enzyme AB237_1009 PF00668 Condensation domain AB237_1010 PF00975 Thioesterase domain AB237_1010 PF00550 Phosphopantetheine attachment site AB237_1010 PF00668 Condensation domain AB237_1010 PF13193 AMP-binding enzyme C-terminal domain AB237_1010 PF00501 AMP-binding enzyme AB237_1011 PF01032 FecCD transport family AB237_1012 PF01032 FecCD transport family AB237_1013 PF00005 ABC transporter AB237_1014 PF01497 Periplasmic binding protein AB237_1015 PF07715 TonB-dependent Receptor Plug Domain AB237_1015 PF00593 TonB dependent receptor AB237_1016 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB237_1017 PF00550 Phosphopantetheine attachment site AB237_1017 PF00501 AMP-binding enzyme AB237_1017 PF00668 Condensation domain AB237_1018 PF13193 AMP-binding enzyme C-terminal domain AB237_1018 PF00501 AMP-binding enzyme AB237_1019 PF00550 Phosphopantetheine attachment site AB237_1019 PF00857 Isochorismatase family AB237_1020 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB237_1021 PF00005 ABC transporter AB237_1021 PF00664 ABC transporter transmembrane region AB237_1022 PF00005 ABC transporter AB237_1022 PF00664 ABC transporter transmembrane region AB237_1023 PF00975 Thioesterase domain AB237_1025 PF00425 chorismate binding enzyme AB237_1027 PF01208 Uroporphyrinogen decarboxylase (URO-D) AB237_1028 PF05675 Protein of unknown function (DUF817) AB237_1031 PF00144 Beta-lactamase AB237_1035 PF01799 [2Fe-2S] binding domain AB237_1035 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_1036 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AB237_1036 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB237_1039 PF00218 Indole-3-glycerol phosphate synthase AB237_1040 PF02885 Glycosyl transferase family, helical bundle domain AB237_1040 PF00591 Glycosyl transferase family, a/b domain AB237_1041 PF00593 TonB dependent receptor AB237_1041 PF07715 TonB-dependent Receptor Plug Domain AB237_1042 PF01433 Peptidase family M1 domain AB237_1042 PF11838 ERAP1-like C-terminal domain AB237_1043 PF00117 Glutamine amidotransferase class-I AB237_1048 PF12161 HsdM N-terminal domain AB237_1048 PF02384 N-6 DNA Methylase AB237_1078 PF13936 Helix-turn-helix domain AB237_1078 PF00665 Integrase core domain AB237_1079 PF01551 Peptidase family M23 AB237_1079 PF01476 LysM domain AB237_1079 PF08525 Opacity-associated protein A N-terminal motif AB237_1084 PF13356 Arm DNA-binding domain AB237_1084 PF00589 Phage integrase family AB237_1086 PF00854 POT family AB237_1088 PF04345 Chorismate lyase AB237_1089 PF01040 UbiA prenyltransferase family AB237_1095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AB237_1095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AB237_1096 PF01784 NIF3 (NGG1p interacting factor 3) AB237_1097 PF13180 PDZ domain AB237_1098 PF01743 Poly A polymerase head domain AB237_1098 PF12627 Probable RNA and SrmB- binding site of polymerase A AB237_1099 PF01515 Phosphate acetyl/butaryl transferase AB237_1099 PF00390 Malic enzyme, N-terminal domain AB237_1099 PF03949 Malic enzyme, NAD binding domain AB237_1100 PF00990 Diguanylate cyclase, GGDEF domain AB237_1100 PF03707 Bacterial signalling protein N terminal repeat AB237_1100 PF00563 EAL domain AB237_1101 PF04452 RNA methyltransferase AB237_1102 PF02219 Methylenetetrahydrofolate reductase AB237_1103 PF05221 S-adenosyl-L-homocysteine hydrolase AB237_1103 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB237_1106 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1106 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1106 PF09317 Domain of unknown function (DUF1974) AB237_1107 PF04055 Radical SAM superfamily AB237_1108 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1108 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB237_1110 PF07690 Major Facilitator Superfamily AB237_1112 PF00557 Metallopeptidase family M24 AB237_1113 PF00318 Ribosomal protein S2 AB237_1114 PF00889 Elongation factor TS AB237_1116 PF12833 Helix-turn-helix domain AB237_1120 PF05036 Sporulation related domain AB237_1120 PF03330 Lytic transglycolase AB237_1121 PF13406 Transglycosylase SLT domain AB237_1122 PF01098 Cell cycle protein AB237_1124 PF14489 QueF-like protein AB237_1124 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AB237_1125 PF01061 ABC-2 type transporter AB237_1126 PF00005 ABC transporter AB237_1132 PF00464 Serine hydroxymethyltransferase AB237_1133 PF02321 Outer membrane efflux protein AB237_1134 PF00873 AcrB/AcrD/AcrF family AB237_1135 PF13533 Biotin-lipoyl like AB237_1136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1136 PF03466 LysR substrate binding domain AB237_1137 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB237_1138 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1139 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1140 PF00005 ABC transporter AB237_1141 PF00893 Small Multidrug Resistance protein AB237_1142 PF00037 4Fe-4S binding domain AB237_1143 PF00392 Bacterial regulatory proteins, gntR family AB237_1143 PF00155 Aminotransferase class I and II AB237_1144 PF02567 Phenazine biosynthesis-like protein AB237_1145 PF00175 Oxidoreductase NAD-binding domain AB237_1145 PF00970 Oxidoreductase FAD-binding domain AB237_1146 PF18389 TrmO C-terminal domain AB237_1146 PF01980 tRNA-methyltransferase O AB237_1148 PF00437 Type II/IV secretion system protein AB237_1150 PF00072 Response regulator receiver domain AB237_1150 PF00486 Transcriptional regulatory protein, C terminal AB237_1151 PF08521 Two-component sensor kinase N-terminal AB237_1151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_1151 PF00512 His Kinase A (phospho-acceptor) domain AB237_1152 PF00293 NUDIX domain AB237_1154 PF00912 Transglycosylase AB237_1154 PF00905 Penicillin binding protein transpeptidase domain AB237_1154 PF14814 Bifunctional transglycosylase second domain AB237_1155 PF01513 ATP-NAD kinase AB237_1156 PF02885 Glycosyl transferase family, helical bundle domain AB237_1156 PF00591 Glycosyl transferase family, a/b domain AB237_1157 PF00375 Sodium:dicarboxylate symporter family AB237_1158 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1158 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_1158 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1159 PF00756 Putative esterase AB237_1160 PF01842 ACT domain AB237_1160 PF01817 Chorismate mutase type II AB237_1160 PF00800 Prephenate dehydratase AB237_1161 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB237_1163 PF01546 Peptidase family M20/M25/M40 AB237_1163 PF07687 Peptidase dimerisation domain AB237_1164 PF12706 Beta-lactamase superfamily domain AB237_1166 PF03883 Peroxide stress protein YaaA AB237_1168 PF05690 Thiazole biosynthesis protein ThiG AB237_1170 PF04241 Protein of unknown function (DUF423) AB237_1171 PF00140 Sigma-70 factor, region 1.2 AB237_1171 PF04542 Sigma-70 region 2 AB237_1171 PF04545 Sigma-70, region 4 AB237_1172 PF00271 Helicase conserved C-terminal domain AB237_1172 PF00270 DEAD/DEAH box helicase AB237_1174 PF00881 Nitroreductase family AB237_1175 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AB237_1175 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AB237_1179 PF01180 Dihydroorotate dehydrogenase AB237_1180 PF02674 Colicin V production protein AB237_1181 PF00156 Phosphoribosyl transferase domain AB237_1184 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB237_1184 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB237_1185 PF01435 Peptidase family M48 AB237_1186 PF09424 Yqey-like protein AB237_1187 PF00814 Glycoprotease family AB237_1195 PF03466 LysR substrate binding domain AB237_1195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1196 PF00202 Aminotransferase class-III AB237_1197 PF00171 Aldehyde dehydrogenase family AB237_1198 PF00324 Amino acid permease AB237_1199 PF13610 DDE domain AB237_1200 PF13495 Phage integrase, N-terminal SAM-like domain AB237_1200 PF00589 Phage integrase family AB237_1202 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_1203 PF13427 Domain of unknown function (DUF4111) AB237_1203 PF01909 Nucleotidyltransferase domain AB237_1204 PF00893 Small Multidrug Resistance protein AB237_1205 PF00809 Pterin binding enzyme AB237_1207 PF13737 Transposase DDE domain AB237_1208 PF07091 Ribosomal RNA methyltransferase (FmrO) AB237_1211 PF01636 Phosphotransferase enzyme family AB237_1212 PF13007 Transposase C of IS166 homeodomain AB237_1212 PF03050 Transposase IS66 family AB237_1212 PF13005 zinc-finger binding domain of transposase IS66 AB237_1212 PF13817 IS66 C-terminal element AB237_1215 PF01051 Initiator Replication protein AB237_1216 PF00375 Sodium:dicarboxylate symporter family AB237_1217 PF16123 Hydroxyacylglutathione hydrolase C-terminus AB237_1217 PF00753 Metallo-beta-lactamase superfamily AB237_1218 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1219 PF09383 NIL domain AB237_1219 PF00005 ABC transporter AB237_1220 PF03180 NLPA lipoprotein AB237_1221 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AB237_1221 PF02843 Phosphoribosylglycinamide synthetase, C domain AB237_1221 PF02844 Phosphoribosylglycinamide synthetase, N domain AB237_1222 PF01808 AICARFT/IMPCHase bienzyme AB237_1222 PF02142 MGS-like domain AB237_1225 PF13932 GidA associated domain AB237_1225 PF01134 Glucose inhibited division protein A AB237_1227 PF14403 Circularly permuted ATP-grasp type 2 AB237_1228 PF08379 Bacterial transglutaminase-like N-terminal region AB237_1228 PF01841 Transglutaminase-like superfamily AB237_1230 PF01168 Alanine racemase, N-terminal domain AB237_1230 PF00842 Alanine racemase, C-terminal domain AB237_1231 PF00772 DnaB-like helicase N terminal domain AB237_1231 PF03796 DnaB-like helicase C terminal domain AB237_1232 PF01281 Ribosomal protein L9, N-terminal domain AB237_1232 PF03948 Ribosomal protein L9, C-terminal domain AB237_1233 PF01250 Ribosomal protein S6 AB237_1234 PF01040 UbiA prenyltransferase family AB237_1235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AB237_1236 PF00510 Cytochrome c oxidase subunit III AB237_1237 PF00115 Cytochrome C and Quinol oxidase polypeptide I AB237_1238 PF06481 COX Aromatic Rich Motif AB237_1238 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AB237_1240 PF00391 PEP-utilising enzyme, mobile domain AB237_1240 PF02896 PEP-utilising enzyme, TIM barrel domain AB237_1240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AB237_1241 PF03618 Kinase/pyrophosphorylase AB237_1243 PF14883 Hypothetical glycosyl hydrolase family 13 AB237_1243 PF01522 Polysaccharide deacetylase AB237_1244 PF00535 Glycosyl transferase family 2 AB237_1245 PF13994 PgaD-like protein AB237_1247 PF00296 Luciferase-like monooxygenase AB237_1250 PF03466 LysR substrate binding domain AB237_1250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1252 PF00472 RF-1 domain AB237_1252 PF03462 PCRF domain AB237_1253 PF17827 PrmC N-terminal domain AB237_1253 PF13847 Methyltransferase domain AB237_1254 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1255 PF09084 NMT1/THI5 like AB237_1256 PF12833 Helix-turn-helix domain AB237_1257 PF00106 short chain dehydrogenase AB237_1258 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1258 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_1258 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1259 PF13193 AMP-binding enzyme C-terminal domain AB237_1259 PF00501 AMP-binding enzyme AB237_1260 PF01613 Flavin reductase like domain AB237_1261 PF00899 ThiF family AB237_1262 PF03109 ABC1 family AB237_1265 PF03814 Potassium-transporting ATPase A subunit AB237_1267 PF02669 K+-transporting ATPase, c chain AB237_1268 PF13493 Domain of unknown function (DUF4118) AB237_1268 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_1268 PF00512 His Kinase A (phospho-acceptor) domain AB237_1268 PF02702 Osmosensitive K+ channel His kinase sensor domain AB237_1269 PF00072 Response regulator receiver domain AB237_1269 PF00486 Transcriptional regulatory protein, C terminal AB237_1270 PF00120 Glutamine synthetase, catalytic domain AB237_1272 PF03232 Ubiquinone biosynthesis protein COQ7 AB237_1273 PF07690 Major Facilitator Superfamily AB237_1274 PF17243 POTRA domain TamA domain 1 AB237_1274 PF01103 Surface antigen AB237_1274 PF07244 Surface antigen variable number repeat AB237_1276 PF00330 Aconitase family (aconitate hydratase) AB237_1276 PF06434 Aconitate hydratase 2 N-terminus AB237_1276 PF11791 Aconitate B N-terminal domain AB237_1277 PF00665 Integrase core domain AB237_1277 PF13936 Helix-turn-helix domain AB237_1279 PF00520 Ion transport protein AB237_1279 PF00027 Cyclic nucleotide-binding domain AB237_1280 PF07690 Major Facilitator Superfamily AB237_1283 PF03466 LysR substrate binding domain AB237_1283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1284 PF04284 Protein of unknown function (DUF441) AB237_1285 PF01479 S4 domain AB237_1285 PF00849 RNA pseudouridylate synthase AB237_1288 PF01479 S4 domain AB237_1288 PF00849 RNA pseudouridylate synthase AB237_1289 PF08676 MutL C terminal dimerisation domain AB237_1289 PF01119 DNA mismatch repair protein, C-terminal domain AB237_1291 PF17209 Hfq protein AB237_1293 PF00881 Nitroreductase family AB237_1294 PF00149 Calcineurin-like phosphoesterase AB237_1295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB237_1296 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AB237_1296 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB237_1297 PF00117 Glutamine amidotransferase class-I AB237_1297 PF02540 NAD synthase AB237_1297 PF00958 GMP synthase C terminal domain AB237_1298 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AB237_1299 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AB237_1300 PF13520 Amino acid permease AB237_1301 PF00171 Aldehyde dehydrogenase family AB237_1303 PF00465 Iron-containing alcohol dehydrogenase AB237_1304 PF14493 Helix-turn-helix domain AB237_1304 PF05970 PIF1-like helicase AB237_1306 PF06445 GyrI-like small molecule binding domain AB237_1307 PF02110 Hydroxyethylthiazole kinase family AB237_1309 PF01433 Peptidase family M1 domain AB237_1309 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AB237_1309 PF11940 Domain of unknown function (DUF3458) Ig-like fold AB237_1311 PF00106 short chain dehydrogenase AB237_1313 PF01817 Chorismate mutase type II AB237_1314 PF01037 Lrp/AsnC ligand binding domain AB237_1316 PF00440 Bacterial regulatory proteins, tetR family AB237_1317 PF07715 TonB-dependent Receptor Plug Domain AB237_1317 PF00593 TonB dependent receptor AB237_1318 PF00924 Mechanosensitive ion channel AB237_1325 PF07715 TonB-dependent Receptor Plug Domain AB237_1325 PF00593 TonB dependent receptor AB237_1328 PF00005 ABC transporter AB237_1328 PF12848 ABC transporter AB237_1329 PF00582 Universal stress protein family AB237_1331 PF00690 Cation transporter/ATPase, N-terminus AB237_1331 PF00689 Cation transporting ATPase, C-terminus AB237_1332 PF02308 MgtC family AB237_1333 PF03594 Benzoate membrane transport protein AB237_1334 PF01037 Lrp/AsnC ligand binding domain AB237_1335 PF01810 LysE type translocator AB237_1337 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1337 PF03466 LysR substrate binding domain AB237_1338 PF00108 Thiolase, N-terminal domain AB237_1338 PF02803 Thiolase, C-terminal domain AB237_1343 PF07690 Major Facilitator Superfamily AB237_1344 PF12169 DNA polymerase III subunits gamma and tau domain III AB237_1344 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AB237_1344 PF12170 DNA polymerase III tau subunit V interacting with alpha AB237_1345 PF05506 Domain of unknown function (DUF756) AB237_1345 PF04185 Phosphoesterase family AB237_1346 PF03061 Thioesterase superfamily AB237_1347 PF00465 Iron-containing alcohol dehydrogenase AB237_1349 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB237_1350 PF01565 FAD binding domain AB237_1350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AB237_1353 PF01645 Conserved region in glutamate synthase AB237_1355 PF00665 Integrase core domain AB237_1355 PF13936 Helix-turn-helix domain AB237_1357 PF00665 Integrase core domain AB237_1357 PF13936 Helix-turn-helix domain AB237_1367 PF16363 GDP-mannose 4,6 dehydratase AB237_1368 PF00206 Lyase AB237_1368 PF10415 Fumarase C C-terminus AB237_1372 PF01266 FAD dependent oxidoreductase AB237_1374 PF02542 YgbB family AB237_1376 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB237_1376 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB237_1387 PF01555 DNA methylase AB237_1415 PF01464 Transglycosylase SLT domain AB237_1415 PF10145 Phage-related minor tail protein AB237_1415 PF01551 Peptidase family M23 AB237_1426 PF13276 HTH-like domain AB237_1426 PF00665 Integrase core domain AB237_1426 PF13333 Integrase core domain AB237_1428 PF12832 MFS_1 like family AB237_1430 PF00289 Biotin carboxylase, N-terminal domain AB237_1430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB237_1430 PF02785 Biotin carboxylase C-terminal domain AB237_1431 PF00364 Biotin-requiring enzyme AB237_1432 PF01220 Dehydroquinase class II AB237_1433 PF00817 impB/mucB/samB family AB237_1433 PF11799 impB/mucB/samB family C-terminal domain AB237_1433 PF13438 Domain of unknown function (DUF4113) AB237_1434 PF00005 ABC transporter AB237_1435 PF00072 Response regulator receiver domain AB237_1435 PF00486 Transcriptional regulatory protein, C terminal AB237_1436 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB237_1436 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB237_1436 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB237_1436 PF13806 Rieske-like [2Fe-2S] domain AB237_1436 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1436 PF04324 BFD-like [2Fe-2S] binding domain AB237_1437 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AB237_1437 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AB237_1437 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1437 PF04324 BFD-like [2Fe-2S] binding domain AB237_1437 PF18267 Rubredoxin NAD+ reductase C-terminal domain AB237_1438 PF00384 Molybdopterin oxidoreductase AB237_1438 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB237_1438 PF04324 BFD-like [2Fe-2S] binding domain AB237_1438 PF01568 Molydopterin dinucleotide binding domain AB237_1439 PF01568 Molydopterin dinucleotide binding domain AB237_1439 PF00384 Molybdopterin oxidoreductase AB237_1439 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB237_1440 PF04055 Radical SAM superfamily AB237_1440 PF06463 Molybdenum Cofactor Synthesis C AB237_1441 PF02391 MoaE protein AB237_1442 PF01967 MoaC family AB237_1442 PF00994 Probable molybdopterin binding domain AB237_1443 PF03454 MoeA C-terminal region (domain IV) AB237_1443 PF03453 MoeA N-terminal region (domain I and II) AB237_1443 PF00994 Probable molybdopterin binding domain AB237_1444 PF01638 HxlR-like helix-turn-helix AB237_1445 PF00392 Bacterial regulatory proteins, gntR family AB237_1445 PF00155 Aminotransferase class I and II AB237_1446 PF00892 EamA-like transporter family AB237_1449 PF02635 DsrE/DsrF-like family AB237_1450 PF16363 GDP-mannose 4,6 dehydratase AB237_1451 PF00206 Lyase AB237_1451 PF10415 Fumarase C C-terminus AB237_1455 PF01266 FAD dependent oxidoreductase AB237_1457 PF02542 YgbB family AB237_1459 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB237_1459 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB237_1463 PF00158 Sigma-54 interaction domain AB237_1463 PF00072 Response regulator receiver domain AB237_1463 PF02954 Bacterial regulatory protein, Fis family AB237_1464 PF00512 His Kinase A (phospho-acceptor) domain AB237_1464 PF00989 PAS fold AB237_1464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_1465 PF00919 Uncharacterized protein family UPF0004 AB237_1465 PF04055 Radical SAM superfamily AB237_1465 PF18693 TRAM domain AB237_1466 PF00696 Amino acid kinase family AB237_1467 PF01765 Ribosome recycling factor AB237_1468 PF01255 Putative undecaprenyl diphosphate synthase AB237_1470 PF13180 PDZ domain AB237_1470 PF17820 PDZ domain AB237_1470 PF02163 Peptidase family M50 AB237_1471 PF01103 Surface antigen AB237_1471 PF07244 Surface antigen variable number repeat AB237_1473 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AB237_1473 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_1474 PF07977 FabA-like domain AB237_1475 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_1475 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AB237_1477 PF02631 RecX family AB237_1478 PF00154 recA bacterial DNA recombination protein AB237_1479 PF01479 S4 domain AB237_1480 PF13419 Haloacid dehalogenase-like hydrolase AB237_1483 PF01037 Lrp/AsnC ligand binding domain AB237_1484 PF00266 Aminotransferase class-V AB237_1485 PF00324 Amino acid permease AB237_1487 PF00082 Subtilase family AB237_1487 PF05922 Peptidase inhibitor I9 AB237_1488 PF00916 Sulfate permease family AB237_1488 PF01740 STAS domain AB237_1489 PF02586 SOS response associated peptidase (SRAP) AB237_1490 PF07995 Glucose / Sorbosone dehydrogenase AB237_1492 PF03707 Bacterial signalling protein N terminal repeat AB237_1492 PF00990 Diguanylate cyclase, GGDEF domain AB237_1492 PF00563 EAL domain AB237_1494 PF13936 Helix-turn-helix domain AB237_1494 PF00665 Integrase core domain AB237_1497 PF02378 Phosphotransferase system, EIIC AB237_1497 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB237_1498 PF00294 pfkB family carbohydrate kinase AB237_1499 PF05524 PEP-utilising enzyme, N-terminal AB237_1499 PF00391 PEP-utilising enzyme, mobile domain AB237_1499 PF02896 PEP-utilising enzyme, TIM barrel domain AB237_1499 PF00381 PTS HPr component phosphorylation site AB237_1499 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB237_1503 PF05525 Branched-chain amino acid transport protein AB237_1504 PF00557 Metallopeptidase family M24 AB237_1505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1505 PF03466 LysR substrate binding domain AB237_1507 PF00462 Glutaredoxin AB237_1508 PF00202 Aminotransferase class-III AB237_1509 PF00478 IMP dehydrogenase / GMP reductase domain AB237_1509 PF00571 CBS domain AB237_1513 PF00448 SRP54-type protein, GTPase domain AB237_1513 PF02881 SRP54-type protein, helical bundle domain AB237_1515 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AB237_1518 PF02322 Cytochrome bd terminal oxidase subunit II AB237_1519 PF01654 Cytochrome bd terminal oxidase subunit I AB237_1521 PF00294 pfkB family carbohydrate kinase AB237_1522 PF07715 TonB-dependent Receptor Plug Domain AB237_1522 PF00593 TonB dependent receptor AB237_1523 PF05193 Peptidase M16 inactive domain AB237_1523 PF00675 Insulinase (Peptidase family M16) AB237_1523 PF08367 Peptidase M16C associated AB237_1524 PF02253 Phospholipase A1 AB237_1525 PF02386 Cation transport protein AB237_1526 PF02254 TrkA-N domain AB237_1526 PF02080 TrkA-C domain AB237_1527 PF00291 Pyridoxal-phosphate dependent enzyme AB237_1527 PF00585 C-terminal regulatory domain of Threonine dehydratase AB237_1528 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AB237_1530 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB237_1530 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB237_1532 PF02617 ATP-dependent Clp protease adaptor protein ClpS AB237_1533 PF10431 C-terminal, D2-small domain, of ClpB protein AB237_1533 PF02861 Clp amino terminal domain, pathogenicity island component AB237_1533 PF17871 AAA lid domain AB237_1533 PF07724 AAA domain (Cdc48 subfamily) AB237_1533 PF00004 ATPase family associated with various cellular activities (AAA) AB237_1534 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AB237_1535 PF00793 DAHP synthetase I family AB237_1541 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB237_1541 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1543 PF13936 Helix-turn-helix domain AB237_1543 PF00665 Integrase core domain AB237_1548 PF06418 CTP synthase N-terminus AB237_1548 PF00117 Glutamine amidotransferase class-I AB237_1549 PF00793 DAHP synthetase I family AB237_1550 PF03952 Enolase, N-terminal domain AB237_1550 PF00113 Enolase, C-terminal TIM barrel domain AB237_1551 PF04239 Protein of unknown function (DUF421) AB237_1552 PF04977 Septum formation initiator AB237_1553 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AB237_1554 PF01144 Coenzyme A transferase AB237_1555 PF01144 Coenzyme A transferase AB237_1556 PF02803 Thiolase, C-terminal domain AB237_1556 PF00108 Thiolase, N-terminal domain AB237_1557 PF10397 Adenylosuccinate lyase C-terminus AB237_1557 PF00206 Lyase AB237_1558 PF00561 alpha/beta hydrolase fold AB237_1559 PF07690 Major Facilitator Superfamily AB237_1560 PF02627 Carboxymuconolactone decarboxylase family AB237_1561 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AB237_1561 PF00775 Dioxygenase AB237_1562 PF00775 Dioxygenase AB237_1563 PF01487 Type I 3-dehydroquinase AB237_1564 PF05048 Periplasmic copper-binding protein (NosD) AB237_1565 PF04966 Carbohydrate-selective porin, OprB family AB237_1566 PF13360 PQQ-like domain AB237_1566 PF01011 PQQ enzyme repeat AB237_1569 PF00753 Metallo-beta-lactamase superfamily AB237_1570 PF01614 Bacterial transcriptional regulator AB237_1570 PF09339 IclR helix-turn-helix domain AB237_1571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1571 PF03466 LysR substrate binding domain AB237_1572 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_1572 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1572 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1575 PF00106 short chain dehydrogenase AB237_1577 PF07690 Major Facilitator Superfamily AB237_1579 PF01425 Amidase AB237_1580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB237_1583 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB237_1583 PF00355 Rieske [2Fe-2S] domain AB237_1586 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_1586 PF00175 Oxidoreductase NAD-binding domain AB237_1587 PF01613 Flavin reductase like domain AB237_1588 PF02311 AraC-like ligand binding domain AB237_1588 PF12833 Helix-turn-helix domain AB237_1589 PF01179 Copper amine oxidase, enzyme domain AB237_1589 PF07833 Copper amine oxidase N-terminal domain AB237_1589 PF02727 Copper amine oxidase, N2 domain AB237_1589 PF02728 Copper amine oxidase, N3 domain AB237_1591 PF00171 Aldehyde dehydrogenase family AB237_1592 PF01804 Penicillin amidase AB237_1593 PF12146 Serine aminopeptidase, S33 AB237_1594 PF00108 Thiolase, N-terminal domain AB237_1594 PF02803 Thiolase, C-terminal domain AB237_1595 PF01144 Coenzyme A transferase AB237_1596 PF01144 Coenzyme A transferase AB237_1597 PF00775 Dioxygenase AB237_1597 PF04444 Catechol dioxygenase N terminus AB237_1598 PF02426 Muconolactone delta-isomerase AB237_1599 PF13378 Enolase C-terminal domain-like AB237_1599 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AB237_1600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1600 PF03466 LysR substrate binding domain AB237_1602 PF00392 Bacterial regulatory proteins, gntR family AB237_1602 PF07729 FCD domain AB237_1603 PF00920 Dehydratase family AB237_1604 PF07690 Major Facilitator Superfamily AB237_1606 PF00171 Aldehyde dehydrogenase family AB237_1608 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1608 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1608 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_1610 PF02954 Bacterial regulatory protein, Fis family AB237_1610 PF06506 Propionate catabolism activator AB237_1610 PF00158 Sigma-54 interaction domain AB237_1611 PF00501 AMP-binding enzyme AB237_1611 PF13193 AMP-binding enzyme C-terminal domain AB237_1612 PF00474 Sodium:solute symporter family AB237_1613 PF00107 Zinc-binding dehydrogenase AB237_1613 PF08240 Alcohol dehydrogenase GroES-like domain AB237_1614 PF00171 Aldehyde dehydrogenase family AB237_1616 PF00561 alpha/beta hydrolase fold AB237_1617 PF06628 Catalase-related immune-responsive AB237_1617 PF00199 Catalase AB237_1620 PF07859 alpha/beta hydrolase fold AB237_1621 PF01047 MarR family AB237_1622 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB237_1622 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1623 PF01872 RibD C-terminal domain AB237_1624 PF00376 MerR family regulatory protein AB237_1624 PF09278 MerR, DNA binding AB237_1626 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1628 PF12706 Beta-lactamase superfamily domain AB237_1629 PF00440 Bacterial regulatory proteins, tetR family AB237_1629 PF08359 YsiA-like protein, C-terminal region AB237_1631 PF00857 Isochorismatase family AB237_1632 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1632 PF03466 LysR substrate binding domain AB237_1633 PF07995 Glucose / Sorbosone dehydrogenase AB237_1634 PF00999 Sodium/hydrogen exchanger family AB237_1634 PF02254 TrkA-N domain AB237_1636 PF07687 Peptidase dimerisation domain AB237_1636 PF01546 Peptidase family M20/M25/M40 AB237_1638 PF17287 POTRA domain AB237_1638 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AB237_1638 PF08479 POTRA domain, ShlB-type AB237_1639 PF04829 Pre-toxin domain with VENN motif AB237_1639 PF05860 haemagglutination activity domain AB237_1639 PF13332 Hemagglutinin repeat AB237_1639 PF13018 Extended Signal Peptide of Type V secretion system AB237_1641 PF07690 Major Facilitator Superfamily AB237_1642 PF04909 Amidohydrolase AB237_1645 PF08450 SMP-30/Gluconolactonase/LRE-like region AB237_1647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1647 PF03466 LysR substrate binding domain AB237_1651 PF07690 Major Facilitator Superfamily AB237_1652 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB237_1652 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB237_1652 PF01842 ACT domain AB237_1653 PF03737 Aldolase/RraA AB237_1655 PF00665 Integrase core domain AB237_1655 PF13936 Helix-turn-helix domain AB237_1659 PF00171 Aldehyde dehydrogenase family AB237_1660 PF00920 Dehydratase family AB237_1662 PF03466 LysR substrate binding domain AB237_1662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1663 PF01370 NAD dependent epimerase/dehydratase family AB237_1664 PF07690 Major Facilitator Superfamily AB237_1665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB237_1665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB237_1666 PF12833 Helix-turn-helix domain AB237_1666 PF06719 AraC-type transcriptional regulator N-terminus AB237_1668 PF00107 Zinc-binding dehydrogenase AB237_1668 PF08240 Alcohol dehydrogenase GroES-like domain AB237_1674 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB237_1674 PF14572 Phosphoribosyl synthetase-associated domain AB237_1675 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB237_1686 PF00196 Bacterial regulatory proteins, luxR family AB237_1687 PF01425 Amidase AB237_1688 PF13936 Helix-turn-helix domain AB237_1688 PF00665 Integrase core domain AB237_1689 PF13533 Biotin-lipoyl like AB237_1690 PF07690 Major Facilitator Superfamily AB237_1695 PF01975 Survival protein SurE AB237_1697 PF13291 ACT domain AB237_1697 PF02824 TGS domain AB237_1697 PF04607 Region found in RelA / SpoT proteins AB237_1702 PF13936 Helix-turn-helix domain AB237_1702 PF00665 Integrase core domain AB237_1707 PF12146 Serine aminopeptidase, S33 AB237_1708 PF12833 Helix-turn-helix domain AB237_1708 PF02311 AraC-like ligand binding domain AB237_1710 PF16527 Two-component sensor protein CpxA, periplasmic domain AB237_1710 PF00672 HAMP domain AB237_1710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_1710 PF00512 His Kinase A (phospho-acceptor) domain AB237_1711 PF00072 Response regulator receiver domain AB237_1711 PF00486 Transcriptional regulatory protein, C terminal AB237_1712 PF00529 HlyD membrane-fusion protein of T1SS AB237_1712 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB237_1713 PF00873 AcrB/AcrD/AcrF family AB237_1714 PF02321 Outer membrane efflux protein AB237_1715 PF12146 Serine aminopeptidase, S33 AB237_1716 PF00743 Flavin-binding monooxygenase-like AB237_1718 PF01266 FAD dependent oxidoreductase AB237_1721 PF16970 Type-1 fimbrial protein, A AB237_1724 PF02753 Pili assembly chaperone PapD, C-terminal domain AB237_1724 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB237_1725 PF13953 PapC C-terminal domain AB237_1725 PF13954 PapC N-terminal domain AB237_1725 PF00577 Outer membrane usher protein AB237_1727 PF08240 Alcohol dehydrogenase GroES-like domain AB237_1727 PF00107 Zinc-binding dehydrogenase AB237_1729 PF00199 Catalase AB237_1732 PF13091 PLD-like domain AB237_1735 PF01244 Membrane dipeptidase (Peptidase family M19) AB237_1736 PF13186 Iron-sulfur cluster-binding domain AB237_1736 PF04055 Radical SAM superfamily AB237_1737 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AB237_1738 PF03070 TENA/THI-4/PQQC family AB237_1739 PF12706 Beta-lactamase superfamily domain AB237_1740 PF02503 Polyphosphate kinase middle domain AB237_1740 PF17941 Polyphosphate kinase C-terminal domain 1 AB237_1740 PF13090 Polyphosphate kinase C-terminal domain 2 AB237_1740 PF13089 Polyphosphate kinase N-terminal domain AB237_1741 PF00149 Calcineurin-like phosphoesterase AB237_1743 PF00857 Isochorismatase family AB237_1743 PF00550 Phosphopantetheine attachment site AB237_1744 PF00106 short chain dehydrogenase AB237_1745 PF00005 ABC transporter AB237_1745 PF03459 TOBE domain AB237_1746 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1748 PF03459 TOBE domain AB237_1749 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB237_1749 PF00355 Rieske [2Fe-2S] domain AB237_1750 PF00866 Ring hydroxylating beta subunit AB237_1751 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_1751 PF00970 Oxidoreductase FAD-binding domain AB237_1751 PF00175 Oxidoreductase NAD-binding domain AB237_1752 PF14525 AraC-binding-like domain AB237_1752 PF12833 Helix-turn-helix domain AB237_1754 PF01613 Flavin reductase like domain AB237_1757 PF01738 Dienelactone hydrolase family AB237_1758 PF07690 Major Facilitator Superfamily AB237_1759 PF06719 AraC-type transcriptional regulator N-terminus AB237_1759 PF12833 Helix-turn-helix domain AB237_1765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1765 PF03466 LysR substrate binding domain AB237_1766 PF01144 Coenzyme A transferase AB237_1767 PF01144 Coenzyme A transferase AB237_1768 PF02667 Short chain fatty acid transporter AB237_1769 PF02803 Thiolase, C-terminal domain AB237_1769 PF00108 Thiolase, N-terminal domain AB237_1770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1770 PF03466 LysR substrate binding domain AB237_1771 PF03466 LysR substrate binding domain AB237_1771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_1772 PF00206 Lyase AB237_1772 PF10415 Fumarase C C-terminus AB237_1773 PF07715 TonB-dependent Receptor Plug Domain AB237_1773 PF00593 TonB dependent receptor AB237_1775 PF07715 TonB-dependent Receptor Plug Domain AB237_1775 PF00593 TonB dependent receptor AB237_1776 PF00083 Sugar (and other) transporter AB237_1778 PF00005 ABC transporter AB237_1779 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB237_1785 PF02525 Flavodoxin-like fold AB237_1786 PF01638 HxlR-like helix-turn-helix AB237_1787 PF12833 Helix-turn-helix domain AB237_1787 PF06445 GyrI-like small molecule binding domain AB237_1790 PF01925 Sulfite exporter TauE/SafE AB237_1791 PF00753 Metallo-beta-lactamase superfamily AB237_1791 PF04273 Putative phosphatase (DUF442) AB237_1792 PF04273 Putative phosphatase (DUF442) AB237_1792 PF00753 Metallo-beta-lactamase superfamily AB237_1793 PF00072 Response regulator receiver domain AB237_1793 PF02954 Bacterial regulatory protein, Fis family AB237_1793 PF00158 Sigma-54 interaction domain AB237_1794 PF01062 Bestrophin, RFP-TM, chloride channel AB237_1795 PF00107 Zinc-binding dehydrogenase AB237_1795 PF08240 Alcohol dehydrogenase GroES-like domain AB237_1796 PF00106 short chain dehydrogenase AB237_1797 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_1797 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB237_1798 PF02817 e3 binding domain AB237_1798 PF00364 Biotin-requiring enzyme AB237_1798 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB237_1799 PF02780 Transketolase, C-terminal domain AB237_1799 PF02779 Transketolase, pyrimidine binding domain AB237_1800 PF04055 Radical SAM superfamily AB237_1803 PF08448 PAS fold AB237_1803 PF00990 Diguanylate cyclase, GGDEF domain AB237_1804 PF01264 Chorismate synthase AB237_1805 PF05175 Methyltransferase small domain AB237_1806 PF00291 Pyridoxal-phosphate dependent enzyme AB237_1808 PF00004 ATPase family associated with various cellular activities (AAA) AB237_1808 PF17862 AAA+ lid domain AB237_1808 PF01434 Peptidase family M41 AB237_1811 PF00570 HRDC domain AB237_1811 PF01612 3'-5' exonuclease AB237_1812 PF02132 RecR protein AB237_1812 PF13662 Toprim domain AB237_1813 PF02575 YbaB/EbfC DNA-binding family AB237_1814 PF01053 Cys/Met metabolism PLP-dependent enzyme AB237_1815 PF00561 alpha/beta hydrolase fold AB237_1816 PF08241 Methyltransferase domain AB237_1820 PF01230 HIT domain AB237_1826 PF00005 ABC transporter AB237_1827 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB237_1829 PF02684 Lipid-A-disaccharide synthetase AB237_1830 PF07715 TonB-dependent Receptor Plug Domain AB237_1830 PF00593 TonB dependent receptor AB237_1832 PF01925 Sulfite exporter TauE/SafE AB237_1833 PF00793 DAHP synthetase I family AB237_1834 PF02654 Cobalamin-5-phosphate synthase AB237_1837 PF02277 Phosphoribosyltransferase AB237_1838 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AB237_1840 PF13419 Haloacid dehalogenase-like hydrolase AB237_1843 PF00593 TonB dependent receptor AB237_1843 PF07715 TonB-dependent Receptor Plug Domain AB237_1846 PF06276 Ferric iron reductase FhuF-like transporter AB237_1846 PF04183 IucA / IucC family AB237_1847 PF06276 Ferric iron reductase FhuF-like transporter AB237_1847 PF04183 IucA / IucC family AB237_1848 PF07690 Major Facilitator Superfamily AB237_1849 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AB237_1850 PF06276 Ferric iron reductase FhuF-like transporter AB237_1850 PF04183 IucA / IucC family AB237_1851 PF04073 Aminoacyl-tRNA editing domain AB237_1853 PF03109 ABC1 family AB237_1854 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_1854 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1854 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_1855 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_1855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_1856 PF00487 Fatty acid desaturase AB237_1857 PF12833 Helix-turn-helix domain AB237_1857 PF12852 Cupin AB237_1858 PF09312 SurA N-terminal domain AB237_1858 PF00639 PPIC-type PPIASE domain AB237_1861 PF02082 Transcriptional regulator AB237_1862 PF00266 Aminotransferase class-V AB237_1863 PF01592 NifU-like N terminal domain AB237_1864 PF01521 Iron-sulphur cluster biosynthesis AB237_1865 PF00226 DnaJ domain AB237_1865 PF07743 HSCB C-terminal oligomerisation domain AB237_1866 PF00012 Hsp70 protein AB237_1867 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_1868 PF00211 Adenylate and Guanylate cyclase catalytic domain AB237_1870 PF00271 Helicase conserved C-terminal domain AB237_1870 PF00270 DEAD/DEAH box helicase AB237_1870 PF02559 CarD-like/TRCF domain AB237_1870 PF03461 TRCF domain AB237_1870 PF17757 UvrB interaction domain AB237_1874 PF03737 Aldolase/RraA AB237_1875 PF13460 NAD(P)H-binding AB237_1876 PF01649 Ribosomal protein S20 AB237_1878 PF00459 Inositol monophosphatase family AB237_1881 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB237_1881 PF00005 ABC transporter AB237_1882 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1883 PF00528 Binding-protein-dependent transport system inner membrane component AB237_1884 PF01432 Peptidase family M3 AB237_1887 PF07715 TonB-dependent Receptor Plug Domain AB237_1887 PF00593 TonB dependent receptor AB237_1889 PF01618 MotA/TolQ/ExbB proton channel family AB237_1890 PF02472 Biopolymer transport protein ExbD/TolR AB237_1892 PF01274 Malate synthase AB237_1898 PF01551 Peptidase family M23 AB237_1898 PF01464 Transglycosylase SLT domain AB237_1898 PF10145 Phage-related minor tail protein AB237_1907 PF04860 Phage portal protein AB237_1918 PF03796 DnaB-like helicase C terminal domain AB237_1918 PF00772 DnaB-like helicase N terminal domain AB237_1924 PF00589 Phage integrase family AB237_1924 PF02899 Phage integrase, N-terminal SAM-like domain AB237_1925 PF03969 AFG1-like ATPase AB237_1927 PF00743 Flavin-binding monooxygenase-like AB237_1929 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB237_1932 PF00575 S1 RNA binding domain AB237_1933 PF02224 Cytidylate kinase AB237_1935 PF14437 MafB19-like deaminase AB237_1937 PF03167 Uracil DNA glycosylase superfamily AB237_1939 PF03934 Type II secretion system (T2SS), protein K AB237_1940 PF11612 Type II secretion system (T2SS), protein J AB237_1940 PF07963 Prokaryotic N-terminal methylation motif AB237_1941 PF07963 Prokaryotic N-terminal methylation motif AB237_1941 PF02501 Type II secretion system (T2SS), protein I AB237_1944 PF01026 TatD related DNase AB237_1946 PF09115 DNA polymerase III, delta subunit, C terminal AB237_1947 PF02348 Cytidylyltransferase AB237_1948 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AB237_1949 PF00664 ABC transporter transmembrane region AB237_1949 PF00005 ABC transporter AB237_1951 PF01618 MotA/TolQ/ExbB proton channel family AB237_1952 PF17762 HTH domain found in ParB protein AB237_1952 PF02195 ParB-like nuclease domain AB237_1953 PF13614 AAA domain AB237_1954 PF02527 rRNA small subunit methyltransferase G AB237_1955 PF00483 Nucleotidyl transferase AB237_1956 PF01636 Phosphotransferase enzyme family AB237_1957 PF03968 OstA-like protein AB237_1957 PF04453 LPS transport system D AB237_1958 PF09312 SurA N-terminal domain AB237_1958 PF00639 PPIC-type PPIASE domain AB237_1959 PF01116 Fructose-bisphosphate aldolase class-II AB237_1960 PF00162 Phosphoglycerate kinase AB237_1961 PF02545 Maf-like protein AB237_1962 PF08007 Cupin superfamily protein AB237_1965 PF00375 Sodium:dicarboxylate symporter family AB237_1966 PF06912 Protein of unknown function (DUF1275) AB237_1967 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AB237_1968 PF00005 ABC transporter AB237_1968 PF00664 ABC transporter transmembrane region AB237_1970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB237_1970 PF12833 Helix-turn-helix domain AB237_1971 PF01597 Glycine cleavage H-protein AB237_1972 PF02146 Sir2 family AB237_1973 PF00474 Sodium:solute symporter family AB237_1974 PF01037 Lrp/AsnC ligand binding domain AB237_1975 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AB237_1975 PF14850 DNA-binding domain of Proline dehydrogenase AB237_1975 PF00171 Aldehyde dehydrogenase family AB237_1975 PF01619 Proline dehydrogenase AB237_1976 PF04229 GrpB protein AB237_1977 PF05958 tRNA (Uracil-5-)-methyltransferase AB237_1978 PF09992 Phosphodiester glycosidase AB237_1980 PF04264 YceI-like domain AB237_1982 PF02780 Transketolase, C-terminal domain AB237_1982 PF00456 Transketolase, thiamine diphosphate binding domain AB237_1982 PF02779 Transketolase, pyrimidine binding domain AB237_1983 PF02772 S-adenosylmethionine synthetase, central domain AB237_1983 PF02773 S-adenosylmethionine synthetase, C-terminal domain AB237_1983 PF00438 S-adenosylmethionine synthetase, N-terminal domain AB237_1986 PF00905 Penicillin binding protein transpeptidase domain AB237_1989 PF02075 Crossover junction endodeoxyribonuclease RuvC AB237_1990 PF01256 Carbohydrate kinase AB237_1990 PF03853 YjeF-related protein N-terminus AB237_1991 PF08331 Domain of unknown function (DUF1730) AB237_1992 PF06968 Biotin and Thiamin Synthesis associated domain AB237_1992 PF04055 Radical SAM superfamily AB237_1994 PF16970 Type-1 fimbrial protein, A AB237_1995 PF02753 Pili assembly chaperone PapD, C-terminal domain AB237_1995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AB237_1996 PF00577 Outer membrane usher protein AB237_1996 PF13954 PapC N-terminal domain AB237_1996 PF13953 PapC C-terminal domain AB237_1999 PF00892 EamA-like transporter family AB237_2001 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB237_2003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2003 PF03466 LysR substrate binding domain AB237_2005 PF13936 Helix-turn-helix domain AB237_2005 PF00665 Integrase core domain AB237_2009 PF00440 Bacterial regulatory proteins, tetR family AB237_2011 PF01709 Transcriptional regulator AB237_2012 PF01037 Lrp/AsnC ligand binding domain AB237_2014 PF00005 ABC transporter AB237_2015 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2016 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2019 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB237_2019 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2021 PF00296 Luciferase-like monooxygenase AB237_2022 PF03180 NLPA lipoprotein AB237_2023 PF00005 ABC transporter AB237_2023 PF09383 NIL domain AB237_2024 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2025 PF06071 Protein of unknown function (DUF933) AB237_2025 PF01926 50S ribosome-binding GTPase AB237_2030 PF03591 AzlC protein AB237_2032 PF02222 ATP-grasp domain AB237_2033 PF08335 GlnD PII-uridylyltransferase AB237_2033 PF01909 Nucleotidyltransferase domain AB237_2033 PF01966 HD domain AB237_2035 PF12852 Cupin AB237_2035 PF12833 Helix-turn-helix domain AB237_2036 PF00255 Glutathione peroxidase AB237_2037 PF01641 SelR domain AB237_2038 PF00155 Aminotransferase class I and II AB237_2039 PF00375 Sodium:dicarboxylate symporter family AB237_2040 PF00710 Asparaginase, N-terminal AB237_2040 PF17763 Glutaminase/Asparaginase C-terminal domain AB237_2041 PF01336 OB-fold nucleic acid binding domain AB237_2041 PF02811 PHP domain AB237_2041 PF14579 Helix-hairpin-helix motif AB237_2041 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB237_2041 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB237_2042 PF00588 SpoU rRNA Methylase family AB237_2043 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_2046 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2046 PF13192 Thioredoxin domain AB237_2048 PF03466 LysR substrate binding domain AB237_2048 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2049 PF01758 Sodium Bile acid symporter family AB237_2050 PF01022 Bacterial regulatory protein, arsR family AB237_2051 PF03960 ArsC family AB237_2052 PF13382 Adenine deaminase C-terminal domain AB237_2052 PF01979 Amidohydrolase family AB237_2054 PF03466 LysR substrate binding domain AB237_2054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2056 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB237_2057 PF01177 Asp/Glu/Hydantoin racemase AB237_2058 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AB237_2059 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AB237_2063 PF00083 Sugar (and other) transporter AB237_2064 PF00296 Luciferase-like monooxygenase AB237_2065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB237_2065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2065 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_2069 PF01654 Cytochrome bd terminal oxidase subunit I AB237_2070 PF02322 Cytochrome bd terminal oxidase subunit II AB237_2071 PF00155 Aminotransferase class I and II AB237_2071 PF00392 Bacterial regulatory proteins, gntR family AB237_2072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2072 PF03466 LysR substrate binding domain AB237_2075 PF00698 Acyl transferase domain AB237_2077 PF01039 Carboxyl transferase domain AB237_2078 PF06857 Malonate decarboxylase delta subunit (MdcD) AB237_2079 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB237_2080 PF16957 Malonate decarboxylase, alpha subunit, transporter AB237_2081 PF07690 Major Facilitator Superfamily AB237_2084 PF00155 Aminotransferase class I and II AB237_2084 PF00392 Bacterial regulatory proteins, gntR family AB237_2085 PF04172 LrgB-like family AB237_2086 PF03788 LrgA family AB237_2087 PF03466 LysR substrate binding domain AB237_2087 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2088 PF14834 Glutathione S-transferase, C-terminal domain AB237_2088 PF02798 Glutathione S-transferase, N-terminal domain AB237_2089 PF02798 Glutathione S-transferase, N-terminal domain AB237_2090 PF03466 LysR substrate binding domain AB237_2090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2092 PF00581 Rhodanese-like domain AB237_2093 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_2095 PF00266 Aminotransferase class-V AB237_2096 PF01810 LysE type translocator AB237_2097 PF03466 LysR substrate binding domain AB237_2097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2098 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB237_2099 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB237_2100 PF00005 ABC transporter AB237_2101 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2102 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2104 PF00072 Response regulator receiver domain AB237_2105 PF00072 Response regulator receiver domain AB237_2105 PF00512 His Kinase A (phospho-acceptor) domain AB237_2105 PF09308 LuxQ, periplasmic AB237_2105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_2107 PF13404 AsnC-type helix-turn-helix domain AB237_2107 PF01037 Lrp/AsnC ligand binding domain AB237_2109 PF00717 Peptidase S24-like AB237_2113 PF18011 C-terminal domain found in long catalases AB237_2113 PF06628 Catalase-related immune-responsive AB237_2113 PF00199 Catalase AB237_2115 PF02464 Competence-damaged protein AB237_2115 PF18146 Damage-inducible protein CinA KH domain AB237_2115 PF00994 Probable molybdopterin binding domain AB237_2118 PF13936 Helix-turn-helix domain AB237_2118 PF00665 Integrase core domain AB237_2121 PF03466 LysR substrate binding domain AB237_2121 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2125 PF00501 AMP-binding enzyme AB237_2125 PF13193 AMP-binding enzyme C-terminal domain AB237_2126 PF00440 Bacterial regulatory proteins, tetR family AB237_2127 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_2127 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_2127 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2128 PF01039 Carboxyl transferase domain AB237_2129 PF00378 Enoyl-CoA hydratase/isomerase AB237_2130 PF00289 Biotin carboxylase, N-terminal domain AB237_2130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB237_2130 PF00364 Biotin-requiring enzyme AB237_2130 PF02785 Biotin carboxylase C-terminal domain AB237_2131 PF00682 HMGL-like AB237_2132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2132 PF03466 LysR substrate binding domain AB237_2135 PF12806 Acetyl-CoA dehydrogenase C-terminal like AB237_2135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_2135 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_2135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2137 PF07690 Major Facilitator Superfamily AB237_2139 PF01144 Coenzyme A transferase AB237_2140 PF01144 Coenzyme A transferase AB237_2141 PF07690 Major Facilitator Superfamily AB237_2142 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2142 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_2142 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_2143 PF00378 Enoyl-CoA hydratase/isomerase AB237_2145 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AB237_2145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB237_2145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB237_2146 PF09339 IclR helix-turn-helix domain AB237_2147 PF07690 Major Facilitator Superfamily AB237_2148 PF03060 Nitronate monooxygenase AB237_2149 PF00378 Enoyl-CoA hydratase/isomerase AB237_2150 PF09339 IclR helix-turn-helix domain AB237_2151 PF02515 CoA-transferase family III AB237_2152 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_2152 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_2152 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2153 PF07690 Major Facilitator Superfamily AB237_2154 PF13419 Haloacid dehalogenase-like hydrolase AB237_2155 PF00266 Aminotransferase class-V AB237_2156 PF01266 FAD dependent oxidoreductase AB237_2157 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2158 PF07702 UTRA domain AB237_2158 PF00392 Bacterial regulatory proteins, gntR family AB237_2159 PF01494 FAD binding domain AB237_2160 PF09339 IclR helix-turn-helix domain AB237_2160 PF01614 Bacterial transcriptional regulator AB237_2161 PF02525 Flavodoxin-like fold AB237_2162 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2162 PF03466 LysR substrate binding domain AB237_2163 PF00171 Aldehyde dehydrogenase family AB237_2165 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AB237_2166 PF00171 Aldehyde dehydrogenase family AB237_2167 PF00296 Luciferase-like monooxygenase AB237_2168 PF01613 Flavin reductase like domain AB237_2169 PF12697 Alpha/beta hydrolase family AB237_2172 PF01292 Prokaryotic cytochrome b561 AB237_2173 PF00199 Catalase AB237_2179 PF03061 Thioesterase superfamily AB237_2180 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_2181 PF07848 PaaX-like protein AB237_2181 PF08223 PaaX-like protein C-terminal domain AB237_2182 PF14535 AMP-binding enzyme C-terminal domain AB237_2182 PF00501 AMP-binding enzyme AB237_2183 PF00108 Thiolase, N-terminal domain AB237_2183 PF02803 Thiolase, C-terminal domain AB237_2184 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AB237_2184 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB237_2184 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB237_2185 PF00378 Enoyl-CoA hydratase/isomerase AB237_2186 PF00378 Enoyl-CoA hydratase/isomerase AB237_2187 PF00175 Oxidoreductase NAD-binding domain AB237_2187 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_2187 PF00970 Oxidoreductase FAD-binding domain AB237_2188 PF01883 Iron-sulfur cluster assembly protein AB237_2189 PF05138 Phenylacetic acid catabolic protein AB237_2190 PF06243 Phenylacetic acid degradation B AB237_2191 PF05138 Phenylacetic acid catabolic protein AB237_2192 PF01575 MaoC like domain AB237_2192 PF00171 Aldehyde dehydrogenase family AB237_2193 PF03315 Serine dehydratase beta chain AB237_2193 PF03313 Serine dehydratase alpha chain AB237_2194 PF13520 Amino acid permease AB237_2195 PF00171 Aldehyde dehydrogenase family AB237_2196 PF00083 Sugar (and other) transporter AB237_2198 PF04324 BFD-like [2Fe-2S] binding domain AB237_2198 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2200 PF01266 FAD dependent oxidoreductase AB237_2201 PF00392 Bacterial regulatory proteins, gntR family AB237_2203 PF00701 Dihydrodipicolinate synthetase family AB237_2205 PF09278 MerR, DNA binding AB237_2205 PF00376 MerR family regulatory protein AB237_2208 PF02677 Epoxyqueuosine reductase QueH AB237_2209 PF13936 Helix-turn-helix domain AB237_2209 PF00665 Integrase core domain AB237_2212 PF07690 Major Facilitator Superfamily AB237_2213 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB237_2215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2215 PF03466 LysR substrate binding domain AB237_2221 PF10431 C-terminal, D2-small domain, of ClpB protein AB237_2221 PF00004 ATPase family associated with various cellular activities (AAA) AB237_2221 PF07724 AAA domain (Cdc48 subfamily) AB237_2221 PF17871 AAA lid domain AB237_2222 PF01389 OmpA-like transmembrane domain AB237_2222 PF00691 OmpA family AB237_2233 PF00005 ABC transporter AB237_2234 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB237_2235 PF01425 Amidase AB237_2236 PF08753 NikR C terminal nickel binding domain AB237_2236 PF01402 Ribbon-helix-helix protein, copG family AB237_2238 PF02525 Flavodoxin-like fold AB237_2239 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB237_2239 PF00289 Biotin carboxylase, N-terminal domain AB237_2239 PF02785 Biotin carboxylase C-terminal domain AB237_2242 PF00107 Zinc-binding dehydrogenase AB237_2242 PF08240 Alcohol dehydrogenase GroES-like domain AB237_2242 PF13823 Alcohol dehydrogenase GroES-associated AB237_2244 PF00440 Bacterial regulatory proteins, tetR family AB237_2249 PF00654 Voltage gated chloride channel AB237_2250 PF02785 Biotin carboxylase C-terminal domain AB237_2250 PF00289 Biotin carboxylase, N-terminal domain AB237_2250 PF00364 Biotin-requiring enzyme AB237_2250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AB237_2252 PF07286 Protein of unknown function (DUF1445) AB237_2253 PF03746 LamB/YcsF family AB237_2254 PF01566 Natural resistance-associated macrophage protein AB237_2255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2255 PF03466 LysR substrate binding domain AB237_2258 PF14220 Domain of unknown function (DUF4329) AB237_2258 PF05593 RHS Repeat AB237_2258 PF03527 RHS protein AB237_2259 PF16671 Actin cross-linking domain AB237_2259 PF04717 Type VI secretion system, phage-baseplate injector AB237_2261 PF13419 Haloacid dehalogenase-like hydrolase AB237_2264 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB237_2264 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB237_2268 PF07690 Major Facilitator Superfamily AB237_2270 PF03279 Bacterial lipid A biosynthesis acyltransferase AB237_2271 PF00563 EAL domain AB237_2271 PF00990 Diguanylate cyclase, GGDEF domain AB237_2271 PF03707 Bacterial signalling protein N terminal repeat AB237_2272 PF00892 EamA-like transporter family AB237_2273 PF01037 Lrp/AsnC ligand binding domain AB237_2274 PF00488 MutS domain V AB237_2274 PF05190 MutS family domain IV AB237_2274 PF05192 MutS domain III AB237_2274 PF05188 MutS domain II AB237_2274 PF01624 MutS domain I AB237_2276 PF00037 4Fe-4S binding domain AB237_2276 PF11953 Domain of unknown function (DUF3470) AB237_2278 PF01596 O-methyltransferase AB237_2280 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_2281 PF01205 Uncharacterized protein family UPF0029 AB237_2283 PF03412 Peptidase C39 family AB237_2283 PF00005 ABC transporter AB237_2283 PF00664 ABC transporter transmembrane region AB237_2284 PF02321 Outer membrane efflux protein AB237_2285 PF00005 ABC transporter AB237_2285 PF12399 Branched-chain amino acid ATP-binding cassette transporter AB237_2286 PF03968 OstA-like protein AB237_2289 PF01380 SIS domain AB237_2289 PF00571 CBS domain AB237_2290 PF09190 DALR domain AB237_2290 PF01406 tRNA synthetases class I (C) catalytic domain AB237_2295 PF01638 HxlR-like helix-turn-helix AB237_2296 PF07690 Major Facilitator Superfamily AB237_2300 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB237_2300 PF03807 NADP oxidoreductase coenzyme F420-dependent AB237_2301 PF01810 LysE type translocator AB237_2306 PF13742 OB-fold nucleic acid binding domain AB237_2306 PF02601 Exonuclease VII, large subunit AB237_2312 PF00376 MerR family regulatory protein AB237_2312 PF09278 MerR, DNA binding AB237_2313 PF00403 Heavy-metal-associated domain AB237_2314 PF03466 LysR substrate binding domain AB237_2314 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2315 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB237_2315 PF00355 Rieske [2Fe-2S] domain AB237_2316 PF00866 Ring hydroxylating beta subunit AB237_2317 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_2317 PF00175 Oxidoreductase NAD-binding domain AB237_2317 PF00970 Oxidoreductase FAD-binding domain AB237_2318 PF00106 short chain dehydrogenase AB237_2319 PF13936 Helix-turn-helix domain AB237_2319 PF00665 Integrase core domain AB237_2320 PF03594 Benzoate membrane transport protein AB237_2321 PF07690 Major Facilitator Superfamily AB237_2323 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AB237_2323 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AB237_2324 PF11898 Domain of unknown function (DUF3418) AB237_2324 PF00271 Helicase conserved C-terminal domain AB237_2324 PF00270 DEAD/DEAH box helicase AB237_2324 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AB237_2324 PF04408 Helicase associated domain (HA2) AB237_2325 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB237_2325 PF00578 AhpC/TSA family AB237_2327 PF13192 Thioredoxin domain AB237_2327 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2329 PF00043 Glutathione S-transferase, C-terminal domain AB237_2329 PF02798 Glutathione S-transferase, N-terminal domain AB237_2331 PF02390 Putative methyltransferase AB237_2332 PF13417 Glutathione S-transferase, N-terminal domain AB237_2332 PF00043 Glutathione S-transferase, C-terminal domain AB237_2334 PF00691 OmpA family AB237_2334 PF13488 Glycine zipper AB237_2335 PF01979 Amidohydrolase family AB237_2336 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB237_2336 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB237_2338 PF02926 THUMP domain AB237_2338 PF10672 S-adenosylmethionine-dependent methyltransferase AB237_2338 PF01170 Putative RNA methylase family UPF0020 AB237_2341 PF10431 C-terminal, D2-small domain, of ClpB protein AB237_2341 PF02861 Clp amino terminal domain, pathogenicity island component AB237_2341 PF00004 ATPase family associated with various cellular activities (AAA) AB237_2341 PF07724 AAA domain (Cdc48 subfamily) AB237_2341 PF17871 AAA lid domain AB237_2344 PF02566 OsmC-like protein AB237_2345 PF13545 Crp-like helix-turn-helix domain AB237_2345 PF00027 Cyclic nucleotide-binding domain AB237_2348 PF00248 Aldo/keto reductase family AB237_2351 PF00709 Adenylosuccinate synthetase AB237_2352 PF13393 Histidyl-tRNA synthetase AB237_2353 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB237_2353 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB237_2354 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB237_2354 PF01411 tRNA synthetases class II (A) AB237_2354 PF02272 DHHA1 domain AB237_2355 PF01842 ACT domain AB237_2355 PF00696 Amino acid kinase family AB237_2355 PF13840 ACT domain AB237_2356 PF01351 Ribonuclease HII AB237_2358 PF01292 Prokaryotic cytochrome b561 AB237_2359 PF00962 Adenosine/AMP deaminase AB237_2360 PF13610 DDE domain AB237_2361 PF04958 Arginine N-succinyltransferase beta subunit AB237_2362 PF00202 Aminotransferase class-III AB237_2364 PF00171 Aldehyde dehydrogenase family AB237_2366 PF00392 Bacterial regulatory proteins, gntR family AB237_2366 PF07729 FCD domain AB237_2368 PF00324 Amino acid permease AB237_2369 PF01266 FAD dependent oxidoreductase AB237_2370 PF00324 Amino acid permease AB237_2376 PF05593 RHS Repeat AB237_2376 PF03527 RHS protein AB237_2377 PF16671 Actin cross-linking domain AB237_2377 PF04717 Type VI secretion system, phage-baseplate injector AB237_2379 PF03180 NLPA lipoprotein AB237_2380 PF05987 Bacterial protein of unknown function (DUF898) AB237_2383 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2383 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB237_2384 PF00764 Arginosuccinate synthase AB237_2385 PF01590 GAF domain AB237_2385 PF00990 Diguanylate cyclase, GGDEF domain AB237_2385 PF00360 Phytochrome region AB237_2385 PF00563 EAL domain AB237_2386 PF01979 Amidohydrolase family AB237_2387 PF00929 Exonuclease AB237_2389 PF00593 TonB dependent receptor AB237_2389 PF07715 TonB-dependent Receptor Plug Domain AB237_2390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AB237_2391 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB237_2391 PF00005 ABC transporter AB237_2392 PF00528 Binding-protein-dependent transport system inner membrane component AB237_2393 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB237_2394 PF01464 Transglycosylase SLT domain AB237_2394 PF01476 LysM domain AB237_2394 PF01476 LysM domain AB237_2394 PF01464 Transglycosylase SLT domain AB237_2395 PF00929 Exonuclease AB237_2397 PF00293 NUDIX domain AB237_2397 PF09297 NADH pyrophosphatase zinc ribbon domain AB237_2399 PF04972 BON domain AB237_2400 PF02021 Uncharacterised protein family UPF0102 AB237_2401 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB237_2403 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2403 PF03466 LysR substrate binding domain AB237_2404 PF01810 LysE type translocator AB237_2406 PF13411 MerR HTH family regulatory protein AB237_2408 PF01494 FAD binding domain AB237_2409 PF01494 FAD binding domain AB237_2410 PF05195 Aminopeptidase P, N-terminal domain AB237_2410 PF00557 Metallopeptidase family M24 AB237_2415 PF00884 Sulfatase AB237_2415 PF08019 Phosphoethanolamine transferase EptA/EptB AB237_2420 PF10145 Phage-related minor tail protein AB237_2420 PF01464 Transglycosylase SLT domain AB237_2420 PF01551 Peptidase family M23 AB237_2443 PF13936 Helix-turn-helix domain AB237_2443 PF00665 Integrase core domain AB237_2461 PF01812 5-formyltetrahydrofolate cyclo-ligase family AB237_2463 PF13018 Extended Signal Peptide of Type V secretion system AB237_2463 PF03895 YadA-like membrane anchor domain AB237_2463 PF05658 Head domain of trimeric autotransporter adhesin AB237_2463 PF05662 Coiled stalk of trimeric autotransporter adhesin AB237_2464 PF00004 ATPase family associated with various cellular activities (AAA) AB237_2464 PF05362 Lon protease (S16) C-terminal proteolytic domain AB237_2464 PF02190 ATP-dependent protease La (LON) substrate-binding domain AB237_2465 PF02590 Predicted SPOUT methyltransferase AB237_2466 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AB237_2468 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AB237_2468 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB237_2469 PF04060 Putative Fe-S cluster AB237_2470 PF00633 Helix-hairpin-helix motif AB237_2470 PF10576 Iron-sulfur binding domain of endonuclease III AB237_2470 PF00730 HhH-GPD superfamily base excision DNA repair protein AB237_2471 PF05191 Adenylate kinase, active site lid AB237_2474 PF00905 Penicillin binding protein transpeptidase domain AB237_2474 PF03717 Penicillin-binding Protein dimerisation domain AB237_2477 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB237_2478 PF01730 UreF AB237_2479 PF05194 UreE urease accessory protein, C-terminal domain AB237_2479 PF02814 UreE urease accessory protein, N-terminal domain AB237_2480 PF00449 Urease alpha-subunit, N-terminal domain AB237_2480 PF01979 Amidohydrolase family AB237_2481 PF00699 Urease beta subunit AB237_2482 PF00547 Urease, gamma subunit AB237_2483 PF01774 UreD urease accessory protein AB237_2486 PF00463 Isocitrate lyase family AB237_2487 PF03466 LysR substrate binding domain AB237_2487 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2488 PF01595 Cyclin M transmembrane N-terminal domain AB237_2488 PF03471 Transporter associated domain AB237_2488 PF00571 CBS domain AB237_2489 PF03600 Citrate transporter AB237_2492 PF00009 Elongation factor Tu GTP binding domain AB237_2493 PF01507 Phosphoadenosine phosphosulfate reductase family AB237_2494 PF14052 Capsule assembly protein Wzi AB237_2495 PF01336 OB-fold nucleic acid binding domain AB237_2495 PF00152 tRNA synthetases class II (D, K and N) AB237_2498 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2498 PF18113 Rubredoxin binding C-terminal domain AB237_2499 PF00561 alpha/beta hydrolase fold AB237_2500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2500 PF03466 LysR substrate binding domain AB237_2502 PF13089 Polyphosphate kinase N-terminal domain AB237_2502 PF17941 Polyphosphate kinase C-terminal domain 1 AB237_2502 PF13090 Polyphosphate kinase C-terminal domain 2 AB237_2502 PF02503 Polyphosphate kinase middle domain AB237_2503 PF00912 Transglycosylase AB237_2504 PF01694 Rhomboid family AB237_2506 PF00005 ABC transporter AB237_2507 PF00484 Carbonic anhydrase AB237_2508 PF00561 alpha/beta hydrolase fold AB237_2510 PF07715 TonB-dependent Receptor Plug Domain AB237_2510 PF00593 TonB dependent receptor AB237_2511 PF01521 Iron-sulphur cluster biosynthesis AB237_2511 PF01106 NifU-like domain AB237_2513 PF00884 Sulfatase AB237_2515 PF00291 Pyridoxal-phosphate dependent enzyme AB237_2516 PF01384 Phosphate transporter family AB237_2517 PF02965 Vitamin B12 dependent methionine synthase, activation domain AB237_2517 PF02310 B12 binding domain AB237_2517 PF02574 Homocysteine S-methyltransferase AB237_2517 PF02607 B12 binding domain AB237_2517 PF00809 Pterin binding enzyme AB237_2518 PF02779 Transketolase, pyrimidine binding domain AB237_2518 PF02780 Transketolase, C-terminal domain AB237_2519 PF00456 Transketolase, thiamine diphosphate binding domain AB237_2520 PF07690 Major Facilitator Superfamily AB237_2522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2522 PF03466 LysR substrate binding domain AB237_2524 PF01263 Aldose 1-epimerase AB237_2525 PF07690 Major Facilitator Superfamily AB237_2526 PF02311 AraC-like ligand binding domain AB237_2526 PF12833 Helix-turn-helix domain AB237_2527 PF04960 Glutaminase AB237_2528 PF01327 Polypeptide deformylase AB237_2529 PF07690 Major Facilitator Superfamily AB237_2531 PF00205 Thiamine pyrophosphate enzyme, central domain AB237_2531 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB237_2531 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB237_2532 PF00171 Aldehyde dehydrogenase family AB237_2533 PF03447 Homoserine dehydrogenase, NAD binding domain AB237_2533 PF01958 Domain of unknown function DUF108 AB237_2535 PF12697 Alpha/beta hydrolase family AB237_2537 PF07690 Major Facilitator Superfamily AB237_2538 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2538 PF14759 Reductase C-terminal AB237_2539 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB237_2541 PF00355 Rieske [2Fe-2S] domain AB237_2543 PF00355 Rieske [2Fe-2S] domain AB237_2544 PF09339 IclR helix-turn-helix domain AB237_2544 PF01614 Bacterial transcriptional regulator AB237_2547 PF00378 Enoyl-CoA hydratase/isomerase AB237_2549 PF00535 Glycosyl transferase family 2 AB237_2550 PF14883 Hypothetical glycosyl hydrolase family 13 AB237_2550 PF01522 Polysaccharide deacetylase AB237_2551 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB237_2552 PF07152 YaeQ protein AB237_2553 PF00375 Sodium:dicarboxylate symporter family AB237_2554 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB237_2554 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB237_2555 PF03061 Thioesterase superfamily AB237_2557 PF02028 BCCT, betaine/carnitine/choline family transporter AB237_2558 PF02028 BCCT, betaine/carnitine/choline family transporter AB237_2559 PF00440 Bacterial regulatory proteins, tetR family AB237_2559 PF13977 BetI-type transcriptional repressor, C-terminal AB237_2560 PF00171 Aldehyde dehydrogenase family AB237_2561 PF05199 GMC oxidoreductase AB237_2561 PF00732 GMC oxidoreductase AB237_2562 PF06039 Malate:quinone oxidoreductase (Mqo) AB237_2564 PF02574 Homocysteine S-methyltransferase AB237_2565 PF13520 Amino acid permease AB237_2570 PF01126 Heme oxygenase AB237_2574 PF00593 TonB dependent receptor AB237_2574 PF07715 TonB-dependent Receptor Plug Domain AB237_2576 PF08281 Sigma-70, region 4 AB237_2576 PF04542 Sigma-70 region 2 AB237_2578 PF00701 Dihydrodipicolinate synthetase family AB237_2579 PF00083 Sugar (and other) transporter AB237_2583 PF01026 TatD related DNase AB237_2585 PF07693 KAP family P-loop domain AB237_2587 PF00665 Integrase core domain AB237_2587 PF13936 Helix-turn-helix domain AB237_2596 PF00589 Phage integrase family AB237_2596 PF13356 Arm DNA-binding domain AB237_2599 PF07690 Major Facilitator Superfamily AB237_2600 PF13533 Biotin-lipoyl like AB237_2601 PF00490 Delta-aminolevulinic acid dehydratase AB237_2602 PF01266 FAD dependent oxidoreductase AB237_2606 PF00149 Calcineurin-like phosphoesterase AB237_2606 PF12320 Type 5 capsule protein repressor C-terminal domain AB237_2608 PF01168 Alanine racemase, N-terminal domain AB237_2609 PF00437 Type II/IV secretion system protein AB237_2610 PF00437 Type II/IV secretion system protein AB237_2611 PF01475 Ferric uptake regulator family AB237_2612 PF04355 SmpA / OmlA family AB237_2614 PF01814 Hemerythrin HHE cation binding domain AB237_2615 PF13230 Glutamine amidotransferases class-II AB237_2617 PF00696 Amino acid kinase family AB237_2618 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB237_2618 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB237_2618 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB237_2618 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB237_2619 PF00692 dUTPase AB237_2620 PF13361 UvrD-like helicase C-terminal domain AB237_2620 PF00580 UvrD/REP helicase N-terminal domain AB237_2621 PF13488 Glycine zipper AB237_2621 PF00691 OmpA family AB237_2622 PF01553 Acyltransferase AB237_2624 PF03775 Septum formation inhibitor MinC, C-terminal domain AB237_2625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AB237_2626 PF03776 Septum formation topological specificity factor MinE AB237_2629 PF01810 LysE type translocator AB237_2630 PF09397 Ftsk gamma domain AB237_2630 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AB237_2630 PF01580 FtsK/SpoIIIE family AB237_2630 PF17854 FtsK alpha domain AB237_2631 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB237_2632 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AB237_2633 PF04377 Arginine-tRNA-protein transferase, C terminus AB237_2633 PF04376 Arginine-tRNA-protein transferase, N terminus AB237_2634 PF00583 Acetyltransferase (GNAT) family AB237_2637 PF03143 Elongation factor Tu C-terminal domain AB237_2637 PF03144 Elongation factor Tu domain 2 AB237_2637 PF00009 Elongation factor Tu GTP binding domain AB237_2638 PF03144 Elongation factor Tu domain 2 AB237_2638 PF00009 Elongation factor Tu GTP binding domain AB237_2638 PF03764 Elongation factor G, domain IV AB237_2638 PF14492 Elongation Factor G, domain II AB237_2638 PF00679 Elongation factor G C-terminus AB237_2639 PF00177 Ribosomal protein S7p/S5e AB237_2640 PF00164 Ribosomal protein S12/S23 AB237_2642 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_2642 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_2644 PF02678 Pirin AB237_2644 PF05726 Pirin C-terminal cupin domain AB237_2646 PF02540 NAD synthase AB237_2646 PF00795 Carbon-nitrogen hydrolase AB237_2649 PF00970 Oxidoreductase FAD-binding domain AB237_2649 PF00175 Oxidoreductase NAD-binding domain AB237_2649 PF00111 2Fe-2S iron-sulfur cluster binding domain AB237_2650 PF00171 Aldehyde dehydrogenase family AB237_2651 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AB237_2651 PF00355 Rieske [2Fe-2S] domain AB237_2652 PF07859 alpha/beta hydrolase fold AB237_2653 PF02028 BCCT, betaine/carnitine/choline family transporter AB237_2654 PF00180 Isocitrate/isopropylmalate dehydrogenase AB237_2655 PF03466 LysR substrate binding domain AB237_2655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2658 PF01467 Cytidylyltransferase-like AB237_2659 PF01668 SmpB protein AB237_2660 PF03358 NADPH-dependent FMN reductase AB237_2661 PF00849 RNA pseudouridylate synthase AB237_2661 PF01479 S4 domain AB237_2662 PF13525 Outer membrane lipoprotein AB237_2663 PF08275 DNA primase catalytic core, N-terminal domain AB237_2663 PF08278 DNA primase DnaG DnaB-binding AB237_2663 PF10410 DnaB-helicase binding domain of primase AB237_2663 PF01807 CHC2 zinc finger AB237_2664 PF01488 Shikimate / quinate 5-dehydrogenase AB237_2664 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AB237_2664 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AB237_2666 PF03550 Outer membrane lipoprotein LolB AB237_2667 PF08544 GHMP kinases C terminal AB237_2667 PF00288 GHMP kinases N terminal domain AB237_2671 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB237_2671 PF14572 Phosphoribosyl synthetase-associated domain AB237_2672 PF01386 Ribosomal L25p family AB237_2673 PF01195 Peptidyl-tRNA hydrolase AB237_2674 PF02261 Aspartate decarboxylase AB237_2677 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AB237_2679 PF03070 TENA/THI-4/PQQC family AB237_2679 PF08543 Phosphomethylpyrimidine kinase AB237_2679 PF02581 Thiamine monophosphate synthase AB237_2680 PF04972 BON domain AB237_2680 PF01476 LysM domain AB237_2681 PF00550 Phosphopantetheine attachment site AB237_2683 PF00698 Acyl transferase domain AB237_2684 PF02620 Large ribosomal RNA subunit accumulation protein YceD AB237_2685 PF04315 Elongation factor P hydroxylase AB237_2686 PF01300 Telomere recombination AB237_2687 PF02616 Segregation and condensation protein ScpA AB237_2688 PF00849 RNA pseudouridylate synthase AB237_2688 PF01479 S4 domain AB237_2691 PF00155 Aminotransferase class I and II AB237_2692 PF04055 Radical SAM superfamily AB237_2692 PF00202 Aminotransferase class-III AB237_2692 PF06968 Biotin and Thiamin Synthesis associated domain AB237_2693 PF12697 Alpha/beta hydrolase family AB237_2693 PF08241 Methyltransferase domain AB237_2694 PF02358 Trehalose-phosphatase AB237_2695 PF00982 Glycosyltransferase family 20 AB237_2696 PF07690 Major Facilitator Superfamily AB237_2697 PF00210 Ferritin-like domain AB237_2700 PF00905 Penicillin binding protein transpeptidase domain AB237_2705 PF12826 Helix-hairpin-helix motif AB237_2705 PF00533 BRCA1 C Terminus (BRCT) domain AB237_2705 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AB237_2705 PF01653 NAD-dependent DNA ligase adenylation domain AB237_2705 PF03120 NAD-dependent DNA ligase OB-fold domain AB237_2707 PF02463 RecF/RecN/SMC N terminal domain AB237_2707 PF06470 SMC proteins Flexible Hinge Domain AB237_2709 PF01925 Sulfite exporter TauE/SafE AB237_2711 PF03309 Type III pantothenate kinase AB237_2712 PF00448 SRP54-type protein, GTPase domain AB237_2712 PF02978 Signal peptide binding domain AB237_2712 PF02881 SRP54-type protein, helical bundle domain AB237_2714 PF01207 Dihydrouridine synthase (Dus) AB237_2719 PF00692 dUTPase AB237_2722 PF01048 Phosphorylase superfamily AB237_2723 PF10609 NUBPL iron-transfer P-loop NTPase AB237_2725 PF01588 Putative tRNA binding domain AB237_2725 PF09334 tRNA synthetases class I (M) AB237_2730 PF13533 Biotin-lipoyl like AB237_2731 PF00291 Pyridoxal-phosphate dependent enzyme AB237_2733 PF05552 Conserved TM helix AB237_2735 PF00970 Oxidoreductase FAD-binding domain AB237_2735 PF00175 Oxidoreductase NAD-binding domain AB237_2736 PF03466 LysR substrate binding domain AB237_2736 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2738 PF00361 Proton-conducting membrane transporter AB237_2739 PF00361 Proton-conducting membrane transporter AB237_2740 PF00361 Proton-conducting membrane transporter AB237_2740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB237_2741 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AB237_2742 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AB237_2743 PF12838 4Fe-4S dicluster domain AB237_2744 PF00146 NADH dehydrogenase AB237_2745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AB237_2745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB237_2745 PF00384 Molybdopterin oxidoreductase AB237_2746 PF10531 SLBB domain AB237_2746 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB237_2746 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AB237_2748 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AB237_2748 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AB237_2749 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AB237_2750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AB237_2751 PF00990 Diguanylate cyclase, GGDEF domain AB237_2751 PF17151 Periplasmic sensor domain AB237_2753 PF00512 His Kinase A (phospho-acceptor) domain AB237_2753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_2753 PF00672 HAMP domain AB237_2754 PF00072 Response regulator receiver domain AB237_2754 PF00486 Transcriptional regulatory protein, C terminal AB237_2755 PF03477 ATP cone domain AB237_2755 PF02867 Ribonucleotide reductase, barrel domain AB237_2755 PF00317 Ribonucleotide reductase, all-alpha domain AB237_2756 PF00268 Ribonucleotide reductase, small chain AB237_2758 PF13936 Helix-turn-helix domain AB237_2758 PF00665 Integrase core domain AB237_2761 PF01613 Flavin reductase like domain AB237_2762 PF01717 Cobalamin-independent synthase, Catalytic domain AB237_2762 PF08267 Cobalamin-independent synthase, N-terminal domain AB237_2764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2764 PF03466 LysR substrate binding domain AB237_2765 PF01810 LysE type translocator AB237_2767 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AB237_2767 PF12833 Helix-turn-helix domain AB237_2768 PF01546 Peptidase family M20/M25/M40 AB237_2768 PF07687 Peptidase dimerisation domain AB237_2770 PF03466 LysR substrate binding domain AB237_2770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2771 PF07690 Major Facilitator Superfamily AB237_2773 PF03466 LysR substrate binding domain AB237_2773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2774 PF00890 FAD binding domain AB237_2774 PF14537 Cytochrome c3 AB237_2776 PF02515 CoA-transferase family III AB237_2777 PF07690 Major Facilitator Superfamily AB237_2778 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_2778 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_2778 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_2779 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2779 PF03466 LysR substrate binding domain AB237_2780 PF00107 Zinc-binding dehydrogenase AB237_2780 PF08240 Alcohol dehydrogenase GroES-like domain AB237_2781 PF00962 Adenosine/AMP deaminase AB237_2783 PF00589 Phage integrase family AB237_2783 PF12167 Arm DNA-binding domain AB237_2784 PF00929 Exonuclease AB237_2787 PF00005 ABC transporter AB237_2790 PF10549 ORF11CD3 domain AB237_2790 PF09669 Phage regulatory protein Rha (Phage_pRha) AB237_2803 PF01471 Putative peptidoglycan binding domain AB237_2803 PF01520 N-acetylmuramoyl-L-alanine amidase AB237_2816 PF02445 Quinolinate synthetase A protein AB237_2817 PF01960 ArgJ family AB237_2818 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB237_2818 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB237_2819 PF00893 Small Multidrug Resistance protein AB237_2821 PF05275 Copper resistance protein B precursor (CopB) AB237_2822 PF07732 Multicopper oxidase AB237_2822 PF07731 Multicopper oxidase AB237_2822 PF00394 Multicopper oxidase AB237_2825 PF00834 Ribulose-phosphate 3 epimerase family AB237_2826 PF00756 Putative esterase AB237_2828 PF04445 Putative SAM-dependent methyltransferase AB237_2829 PF00132 Bacterial transferase hexapeptide (six repeats) AB237_2830 PF00293 NUDIX domain AB237_2839 PF04715 Anthranilate synthase component I, N terminal region AB237_2839 PF00425 chorismate binding enzyme AB237_2840 PF00155 Aminotransferase class I and II AB237_2841 PF00815 Histidinol dehydrogenase AB237_2842 PF01634 ATP phosphoribosyltransferase AB237_2843 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB237_2844 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AB237_2845 PF00309 Sigma-54 factor, Activator interacting domain (AID) AB237_2845 PF04963 Sigma-54 factor, core binding domain AB237_2845 PF04552 Sigma-54, DNA binding domain AB237_2860 PF00795 Carbon-nitrogen hydrolase AB237_2862 PF01047 MarR family AB237_2863 PF02566 OsmC-like protein AB237_2864 PF00437 Type II/IV secretion system protein AB237_2868 PF01367 5'-3' exonuclease, C-terminal SAM fold AB237_2868 PF01612 3'-5' exonuclease AB237_2868 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AB237_2868 PF00476 DNA polymerase family A AB237_2869 PF02325 YGGT family AB237_2870 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB237_2870 PF03807 NADP oxidoreductase coenzyme F420-dependent AB237_2871 PF09179 TilS substrate binding domain AB237_2871 PF01171 PP-loop family AB237_2871 PF11734 TilS substrate C-terminal domain AB237_2872 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AB237_2873 PF02541 Ppx/GppA phosphatase family AB237_2874 PF00085 Thioredoxin AB237_2875 PF07497 Rho termination factor, RNA-binding domain AB237_2875 PF07498 Rho termination factor, N-terminal domain AB237_2875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB237_2876 PF00216 Bacterial DNA-binding protein AB237_2877 PF01588 Putative tRNA binding domain AB237_2877 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AB237_2877 PF03484 tRNA synthetase B5 domain AB237_2877 PF03483 B3/4 domain AB237_2877 PF03147 Ferredoxin-fold anticodon binding domain AB237_2878 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AB237_2878 PF01409 tRNA synthetases class II core domain (F) AB237_2882 PF00453 Ribosomal protein L20 AB237_2883 PF07690 Major Facilitator Superfamily AB237_2884 PF09335 SNARE associated Golgi protein AB237_2885 PF00043 Glutathione S-transferase, C-terminal domain AB237_2885 PF02798 Glutathione S-transferase, N-terminal domain AB237_2886 PF00707 Translation initiation factor IF-3, C-terminal domain AB237_2886 PF05198 Translation initiation factor IF-3, N-terminal domain AB237_2887 PF02824 TGS domain AB237_2887 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB237_2887 PF03129 Anticodon binding domain AB237_2887 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB237_2888 PF13193 AMP-binding enzyme C-terminal domain AB237_2888 PF00501 AMP-binding enzyme AB237_2889 PF04751 Protein of unknown function (DUF615) AB237_2890 PF00381 PTS HPr component phosphorylation site AB237_2891 PF03668 P-loop ATPase protein family AB237_2892 PF02569 Pantoate-beta-alanine ligase AB237_2893 PF02548 Ketopantoate hydroxymethyltransferase AB237_2894 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AB237_2895 PF12626 Polymerase A arginine-rich C-terminus AB237_2895 PF12627 Probable RNA and SrmB- binding site of polymerase A AB237_2895 PF01743 Poly A polymerase head domain AB237_2896 PF03819 MazG nucleotide pyrophosphohydrolase domain AB237_2898 PF13291 ACT domain AB237_2898 PF04607 Region found in RelA / SpoT proteins AB237_2898 PF02824 TGS domain AB237_2899 PF05958 tRNA (Uracil-5-)-methyltransferase AB237_2901 PF00291 Pyridoxal-phosphate dependent enzyme AB237_2902 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AB237_2902 PF00672 HAMP domain AB237_2902 PF00512 His Kinase A (phospho-acceptor) domain AB237_2902 PF01627 Hpt domain AB237_2902 PF00072 Response regulator receiver domain AB237_2902 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_2903 PF00378 Enoyl-CoA hydratase/isomerase AB237_2904 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB237_2904 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB237_2905 PF01261 Xylose isomerase-like TIM barrel AB237_2907 PF00106 short chain dehydrogenase AB237_2908 PF02233 NAD(P) transhydrogenase beta subunit AB237_2909 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AB237_2910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AB237_2910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AB237_2911 PF00892 EamA-like transporter family AB237_2913 PF07690 Major Facilitator Superfamily AB237_2914 PF01207 Dihydrouridine synthase (Dus) AB237_2916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_2916 PF03466 LysR substrate binding domain AB237_2917 PF00899 ThiF family AB237_2919 PF00694 Aconitase C-terminal domain AB237_2919 PF00330 Aconitase family (aconitate hydratase) AB237_2920 PF01026 TatD related DNase AB237_2923 PF16658 Class II release factor RF3, C-terminal domain AB237_2923 PF00009 Elongation factor Tu GTP binding domain AB237_2923 PF03144 Elongation factor Tu domain 2 AB237_2929 PF00990 Diguanylate cyclase, GGDEF domain AB237_2929 PF03707 Bacterial signalling protein N terminal repeat AB237_2929 PF00563 EAL domain AB237_2931 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AB237_2931 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AB237_2932 PF10369 Small subunit of acetolactate synthase AB237_2933 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AB237_2933 PF00205 Thiamine pyrophosphate enzyme, central domain AB237_2933 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AB237_2935 PF00133 tRNA synthetases class I (I, L, M and V) AB237_2935 PF13603 Leucyl-tRNA synthetase, Domain 2 AB237_2935 PF09334 tRNA synthetases class I (M) AB237_2935 PF08264 Anticodon-binding domain of tRNA AB237_2938 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AB237_2939 PF00005 ABC transporter AB237_2939 PF02687 FtsX-like permease family AB237_2939 PF12704 MacB-like periplasmic core domain AB237_2942 PF00929 Exonuclease AB237_2943 PF03193 RsgA GTPase AB237_2945 PF02556 Preprotein translocase subunit SecB AB237_2948 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_2948 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_2951 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_2951 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_2953 PF04820 Tryptophan halogenase AB237_2956 PF00221 Aromatic amino acid lyase AB237_2958 PF13193 AMP-binding enzyme C-terminal domain AB237_2958 PF00501 AMP-binding enzyme AB237_2960 PF00550 Phosphopantetheine attachment site AB237_2963 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AB237_2963 PF01926 50S ribosome-binding GTPase AB237_2964 PF13360 PQQ-like domain AB237_2965 PF03129 Anticodon binding domain AB237_2965 PF13393 Histidyl-tRNA synthetase AB237_2966 PF04551 GcpE protein AB237_2967 PF13464 Domain of unknown function (DUF4115) AB237_2969 PF04055 Radical SAM superfamily AB237_2970 PF00334 Nucleoside diphosphate kinase AB237_2971 PF01569 PAP2 superfamily AB237_2972 PF13439 Glycosyltransferase Family 4 AB237_2972 PF00534 Glycosyl transferases group 1 AB237_2973 PF17804 Tail specific protease N-terminal domain AB237_2973 PF03572 Peptidase family S41 AB237_2973 PF11818 C-terminal domain of tail specific protease (DUF3340) AB237_2973 PF00595 PDZ domain AB237_2974 PF00933 Glycosyl hydrolase family 3 N terminal domain AB237_2976 PF00561 alpha/beta hydrolase fold AB237_2977 PF00171 Aldehyde dehydrogenase family AB237_2978 PF00171 Aldehyde dehydrogenase family AB237_2979 PF01202 Shikimate kinase AB237_2980 PF02447 GntP family permease AB237_2981 PF01081 KDPG and KHG aldolase AB237_2982 PF00920 Dehydratase family AB237_2983 PF00871 Acetokinase family AB237_2984 PF01515 Phosphate acetyl/butaryl transferase AB237_2984 PF07085 DRTGG domain AB237_2985 PF05683 Fumarase C-terminus AB237_2985 PF05681 Fumarate hydratase (Fumerase) AB237_2988 PF10431 C-terminal, D2-small domain, of ClpB protein AB237_2988 PF06689 ClpX C4-type zinc finger AB237_2988 PF07724 AAA domain (Cdc48 subfamily) AB237_2989 PF00574 Clp protease AB237_2990 PF05697 Bacterial trigger factor protein (TF) AB237_2990 PF05698 Bacterial trigger factor protein (TF) C-terminus AB237_2990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB237_2991 PF07715 TonB-dependent Receptor Plug Domain AB237_2991 PF00593 TonB dependent receptor AB237_2992 PF18331 PKHD-type hydroxylase C-terminal domain AB237_2992 PF13640 2OG-Fe(II) oxygenase superfamily AB237_2993 PF08502 LeuA allosteric (dimerisation) domain AB237_2993 PF00682 HMGL-like AB237_2994 PF00561 alpha/beta hydrolase fold AB237_2995 PF07021 Methionine biosynthesis protein MetW AB237_2995 PF00561 alpha/beta hydrolase fold AB237_2996 PF01725 Ham1 family AB237_2998 PF02416 mttA/Hcf106 family AB237_2999 PF00902 Sec-independent protein translocase protein (TatC) AB237_3003 PF01790 Prolipoprotein diacylglyceryl transferase AB237_3005 PF00303 Thymidylate synthase AB237_3006 PF00186 Dihydrofolate reductase AB237_3008 PF01625 Peptide methionine sulfoxide reductase AB237_3010 PF01618 MotA/TolQ/ExbB proton channel family AB237_3012 PF00551 Formyl transferase AB237_3012 PF01842 ACT domain AB237_3014 PF00171 Aldehyde dehydrogenase family AB237_3015 PF00999 Sodium/hydrogen exchanger family AB237_3015 PF02254 TrkA-N domain AB237_3018 PF13361 UvrD-like helicase C-terminal domain AB237_3018 PF00580 UvrD/REP helicase N-terminal domain AB237_3021 PF08272 Topoisomerase I zinc-ribbon-like AB237_3021 PF01131 DNA topoisomerase AB237_3021 PF01751 Toprim domain AB237_3021 PF01396 Topoisomerase DNA binding C4 zinc finger AB237_3023 PF01638 HxlR-like helix-turn-helix AB237_3024 PF08240 Alcohol dehydrogenase GroES-like domain AB237_3024 PF00107 Zinc-binding dehydrogenase AB237_3026 PF01810 LysE type translocator AB237_3027 PF03279 Bacterial lipid A biosynthesis acyltransferase AB237_3029 PF00375 Sodium:dicarboxylate symporter family AB237_3031 PF01118 Semialdehyde dehydrogenase, NAD binding domain AB237_3031 PF02774 Semialdehyde dehydrogenase, dimerisation domain AB237_3035 PF01416 tRNA pseudouridine synthase AB237_3039 PF00180 Isocitrate/isopropylmalate dehydrogenase AB237_3041 PF00694 Aconitase C-terminal domain AB237_3042 PF00330 Aconitase family (aconitate hydratase) AB237_3043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_3043 PF03466 LysR substrate binding domain AB237_3046 PF00293 NUDIX domain AB237_3047 PF00391 PEP-utilising enzyme, mobile domain AB237_3047 PF05524 PEP-utilising enzyme, N-terminal AB237_3047 PF01590 GAF domain AB237_3047 PF02896 PEP-utilising enzyme, TIM barrel domain AB237_3048 PF00141 Peroxidase AB237_3049 PF12706 Beta-lactamase superfamily domain AB237_3050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_3050 PF03466 LysR substrate binding domain AB237_3052 PF02798 Glutathione S-transferase, N-terminal domain AB237_3053 PF08279 HTH domain AB237_3053 PF13280 WYL domain AB237_3054 PF13419 Haloacid dehalogenase-like hydrolase AB237_3055 PF01479 S4 domain AB237_3055 PF00849 RNA pseudouridylate synthase AB237_3056 PF12111 Polyribonucleotide phosphorylase C terminal AB237_3056 PF10150 Ribonuclease E/G family AB237_3056 PF00575 S1 RNA binding domain AB237_3057 PF13193 AMP-binding enzyme C-terminal domain AB237_3057 PF00501 AMP-binding enzyme AB237_3060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_3060 PF03466 LysR substrate binding domain AB237_3061 PF00106 short chain dehydrogenase AB237_3062 PF04055 Radical SAM superfamily AB237_3062 PF06969 HemN C-terminal domain AB237_3064 PF01554 MatE AB237_3065 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_3065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_3065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB237_3066 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_3066 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AB237_3067 PF03109 ABC1 family AB237_3068 PF01197 Ribosomal protein L31 AB237_3070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AB237_3074 PF03884 DNA gyrase inhibitor YacG AB237_3075 PF00753 Metallo-beta-lactamase superfamily AB237_3076 PF00762 Ferrochelatase AB237_3078 PF01177 Asp/Glu/Hydantoin racemase AB237_3081 PF00571 CBS domain AB237_3081 PF03471 Transporter associated domain AB237_3082 PF00795 Carbon-nitrogen hydrolase AB237_3083 PF01588 Putative tRNA binding domain AB237_3085 PF08334 Type II secretion system (T2SS), protein G AB237_3085 PF07963 Prokaryotic N-terminal methylation motif AB237_3086 PF00482 Type II secretion system (T2SS), protein F AB237_3087 PF00271 Helicase conserved C-terminal domain AB237_3087 PF00270 DEAD/DEAH box helicase AB237_3087 PF18074 Primosomal protein N C-terminal domain AB237_3087 PF17764 3′ DNA-binding domain (3′BD) AB237_3087 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AB237_3088 PF00999 Sodium/hydrogen exchanger family AB237_3088 PF02254 TrkA-N domain AB237_3089 PF01430 Hsp33 protein AB237_3091 PF00226 DnaJ domain AB237_3091 PF01556 DnaJ C terminal domain AB237_3093 PF01544 CorA-like Mg2+ transporter protein AB237_3094 PF00013 KH domain AB237_3094 PF03725 3' exoribonuclease family, domain 2 AB237_3094 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AB237_3094 PF01138 3' exoribonuclease family, domain 1 AB237_3094 PF00575 S1 RNA binding domain AB237_3097 PF13538 UvrD-like helicase C-terminal domain AB237_3098 PF12705 PD-(D/E)XK nuclease superfamily AB237_3098 PF13361 UvrD-like helicase C-terminal domain AB237_3098 PF00580 UvrD/REP helicase N-terminal domain AB237_3099 PF17946 RecC C-terminal domain AB237_3101 PF03976 Polyphosphate kinase 2 (PPK2) AB237_3103 PF01209 ubiE/COQ5 methyltransferase family AB237_3105 PF03109 ABC1 family AB237_3106 PF01494 FAD binding domain AB237_3107 PF01502 Phosphoribosyl-AMP cyclohydrolase AB237_3110 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AB237_3110 PF00361 Proton-conducting membrane transporter AB237_3110 PF13244 Domain of unknown function (DUF4040) AB237_3110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AB237_3111 PF00361 Proton-conducting membrane transporter AB237_3114 PF02033 Ribosome-binding factor A AB237_3115 PF08364 Bacterial translation initiation factor IF-2 associated region AB237_3115 PF11987 Translation-initiation factor 2 AB237_3115 PF04760 Translation initiation factor IF-2, N-terminal region AB237_3115 PF00009 Elongation factor Tu GTP binding domain AB237_3116 PF00575 S1 RNA binding domain AB237_3116 PF13184 NusA-like KH domain AB237_3116 PF08529 NusA N-terminal domain AB237_3117 PF02576 RimP N-terminal domain AB237_3117 PF17384 RimP C-terminal SH3 domain AB237_3121 PF03840 Preprotein translocase SecG subunit AB237_3122 PF00121 Triosephosphate isomerase AB237_3123 PF00437 Type II/IV secretion system protein AB237_3123 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AB237_3124 PF00482 Type II secretion system (T2SS), protein F AB237_3125 PF06750 Bacterial Peptidase A24 N-terminal domain AB237_3125 PF01478 Type IV leader peptidase family AB237_3126 PF01121 Dephospho-CoA kinase AB237_3128 PF00588 SpoU rRNA Methylase family AB237_3128 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB237_3129 PF06865 Pyrimidine/purine nucleoside phosphorylase AB237_3131 PF02463 RecF/RecN/SMC N terminal domain AB237_3132 PF02622 Uncharacterized ACR, COG1678 AB237_3133 PF03652 Holliday junction resolvase AB237_3134 PF13533 Biotin-lipoyl like AB237_3138 PF02805 Metal binding domain of Ada AB237_3138 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB237_3138 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB237_3138 PF12833 Helix-turn-helix domain AB237_3139 PF01066 CDP-alcohol phosphatidyltransferase AB237_3141 PF02151 UvrB/uvrC motif AB237_3141 PF01541 GIY-YIG catalytic domain AB237_3141 PF08459 UvrC Helix-hairpin-helix N-terminal AB237_3145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AB237_3145 PF00378 Enoyl-CoA hydratase/isomerase AB237_3145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AB237_3146 PF02803 Thiolase, C-terminal domain AB237_3146 PF00108 Thiolase, N-terminal domain AB237_3150 PF09278 MerR, DNA binding AB237_3150 PF00376 MerR family regulatory protein AB237_3152 PF01323 DSBA-like thioredoxin domain AB237_3155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_3155 PF00183 Hsp90 protein AB237_3158 PF03553 Na+/H+ antiporter family AB237_3158 PF13726 Na+-H+ antiporter family AB237_3159 PF00561 alpha/beta hydrolase fold AB237_3163 PF04983 RNA polymerase Rpb1, domain 3 AB237_3163 PF04997 RNA polymerase Rpb1, domain 1 AB237_3163 PF04998 RNA polymerase Rpb1, domain 5 AB237_3163 PF00623 RNA polymerase Rpb1, domain 2 AB237_3163 PF05000 RNA polymerase Rpb1, domain 4 AB237_3164 PF04565 RNA polymerase Rpb2, domain 3 AB237_3164 PF04561 RNA polymerase Rpb2, domain 2 AB237_3164 PF04563 RNA polymerase beta subunit AB237_3164 PF04560 RNA polymerase Rpb2, domain 7 AB237_3164 PF00562 RNA polymerase Rpb2, domain 6 AB237_3164 PF10385 RNA polymerase beta subunit external 1 domain AB237_3165 PF00542 Ribosomal protein L7/L12 C-terminal domain AB237_3165 PF16320 Ribosomal protein L7/L12 dimerisation domain AB237_3166 PF00466 Ribosomal protein L10 AB237_3167 PF00687 Ribosomal protein L1p/L10e family AB237_3168 PF03946 Ribosomal protein L11, N-terminal domain AB237_3168 PF00298 Ribosomal protein L11, RNA binding domain AB237_3169 PF02357 Transcription termination factor nusG AB237_3169 PF00467 KOW motif AB237_3170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AB237_3172 PF03143 Elongation factor Tu C-terminal domain AB237_3172 PF03144 Elongation factor Tu domain 2 AB237_3172 PF00009 Elongation factor Tu GTP binding domain AB237_3178 PF00425 chorismate binding enzyme AB237_3178 PF04715 Anthranilate synthase component I, N terminal region AB237_3179 PF13419 Haloacid dehalogenase-like hydrolase AB237_3180 PF00498 FHA domain AB237_3180 PF12401 Protein of unknown function (DUF2662) AB237_3181 PF00263 Bacterial type II and III secretion system protein AB237_3181 PF03958 Bacterial type II/III secretion system short domain AB237_3184 PF00816 H-NS histone family AB237_3185 PF13936 Helix-turn-helix domain AB237_3185 PF00665 Integrase core domain AB237_3189 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AB237_3189 PF03900 Porphobilinogen deaminase, C-terminal domain AB237_3190 PF00072 Response regulator receiver domain AB237_3190 PF04397 LytTr DNA-binding domain AB237_3191 PF06580 Histidine kinase AB237_3191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_3191 PF07694 5TMR of 5TMR-LYT AB237_3192 PF00206 Lyase AB237_3192 PF14698 Argininosuccinate lyase C-terminal AB237_3193 PF01895 PhoU domain AB237_3194 PF02321 Outer membrane efflux protein AB237_3195 PF00892 EamA-like transporter family AB237_3198 PF01964 Radical SAM ThiC family AB237_3198 PF13667 ThiC-associated domain AB237_3199 PF00293 NUDIX domain AB237_3200 PF00149 Calcineurin-like phosphoesterase AB237_3201 PF01258 Prokaryotic dksA/traR C4-type zinc finger AB237_3202 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB237_3203 PF01098 Cell cycle protein AB237_3204 PF08245 Mur ligase middle domain AB237_3204 PF02875 Mur ligase family, glutamate ligase domain AB237_3205 PF07664 Ferrous iron transport protein B C terminus AB237_3205 PF07670 Nucleoside recognition AB237_3205 PF02421 Ferrous iron transport protein B AB237_3207 PF00589 Phage integrase family AB237_3207 PF02899 Phage integrase, N-terminal SAM-like domain AB237_3208 PF10411 Disulfide bond isomerase protein N-terminus AB237_3208 PF13098 Thioredoxin-like domain AB237_3209 PF03447 Homoserine dehydrogenase, NAD binding domain AB237_3209 PF00742 Homoserine dehydrogenase AB237_3209 PF01842 ACT domain AB237_3210 PF00291 Pyridoxal-phosphate dependent enzyme AB237_3211 PF00768 D-alanyl-D-alanine carboxypeptidase AB237_3212 PF00072 Response regulator receiver domain AB237_3212 PF00196 Bacterial regulatory proteins, luxR family AB237_3213 PF00512 His Kinase A (phospho-acceptor) domain AB237_3213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB237_3214 PF02954 Bacterial regulatory protein, Fis family AB237_3214 PF00072 Response regulator receiver domain AB237_3214 PF00158 Sigma-54 interaction domain AB237_3215 PF03572 Peptidase family S41 AB237_3215 PF00595 PDZ domain AB237_3216 PF01676 Metalloenzyme superfamily AB237_3216 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AB237_3217 PF03739 Lipopolysaccharide export system permease LptF/LptG AB237_3219 PF02789 Cytosol aminopeptidase family, N-terminal domain AB237_3219 PF00883 Cytosol aminopeptidase family, catalytic domain AB237_3222 PF00677 Lumazine binding domain AB237_3224 PF01872 RibD C-terminal domain AB237_3224 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB237_3225 PF03477 ATP cone domain AB237_3226 PF00909 Ammonium Transporter Family AB237_3227 PF00543 Nitrogen regulatory protein P-II AB237_3228 PF01078 Magnesium chelatase, subunit ChlI AB237_3228 PF13335 Magnesium chelatase, subunit ChlI C-terminal AB237_3230 PF01636 Phosphotransferase enzyme family AB237_3231 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AB237_3233 PF02909 Tetracyclin repressor-like, C-terminal domain AB237_3233 PF00440 Bacterial regulatory proteins, tetR family AB237_3234 PF07690 Major Facilitator Superfamily AB237_3236 PF00916 Sulfate permease family AB237_3236 PF01740 STAS domain AB237_3237 PF00582 Universal stress protein family AB237_3241 PF00665 Integrase core domain AB237_3243 PF13335 Magnesium chelatase, subunit ChlI C-terminal AB237_3243 PF01078 Magnesium chelatase, subunit ChlI AB237_3244 PF00392 Bacterial regulatory proteins, gntR family AB237_3244 PF00155 Aminotransferase class I and II AB237_3246 PF00701 Dihydrodipicolinate synthetase family AB237_3248 PF03573 outer membrane porin, OprD family AB237_3249 PF00719 Inorganic pyrophosphatase AB237_3252 PF00501 AMP-binding enzyme AB237_3252 PF13193 AMP-binding enzyme C-terminal domain AB237_3253 PF00521 DNA gyrase/topoisomerase IV, subunit A AB237_3253 PF03989 DNA gyrase C-terminal domain, beta-propeller AB237_3254 PF07690 Major Facilitator Superfamily AB237_3255 PF03458 UPF0126 domain AB237_3256 PF02810 SEC-C motif AB237_3257 PF03471 Transporter associated domain AB237_3257 PF03741 Integral membrane protein TerC family AB237_3258 PF03641 Possible lysine decarboxylase AB237_3259 PF07690 Major Facilitator Superfamily AB237_3261 PF11798 IMS family HHH motif AB237_3261 PF00817 impB/mucB/samB family AB237_3261 PF11799 impB/mucB/samB family C-terminal domain AB237_3264 PF08497 Radical SAM N-terminal AB237_3264 PF04055 Radical SAM superfamily AB237_3264 PF11842 Domain of unknown function (DUF3362) AB237_3268 PF03358 NADPH-dependent FMN reductase AB237_3270 PF00291 Pyridoxal-phosphate dependent enzyme AB237_3281 PF00440 Bacterial regulatory proteins, tetR family AB237_3285 PF01327 Polypeptide deformylase AB237_3287 PF17782 DprA winged helix domain AB237_3287 PF02481 DNA recombination-mediator protein A AB237_3288 PF01300 Telomere recombination AB237_3289 PF00892 EamA-like transporter family AB237_3290 PF00440 Bacterial regulatory proteins, tetR family AB237_3291 PF07690 Major Facilitator Superfamily AB237_3293 PF00255 Glutathione peroxidase AB237_3295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AB237_3296 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB237_3296 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB237_3297 PF00231 ATP synthase AB237_3298 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB237_3298 PF00306 ATP synthase alpha/beta chain, C terminal domain AB237_3298 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB237_3299 PF00213 ATP synthase delta (OSCP) subunit AB237_3300 PF00430 ATP synthase B/B' CF(0) AB237_3301 PF00119 ATP synthase A chain AB237_3305 PF00005 ABC transporter AB237_3306 PF00950 ABC 3 transport family AB237_3307 PF01810 LysE type translocator AB237_3308 PF04261 Dyp-type peroxidase family AB237_3310 PF03949 Malic enzyme, NAD binding domain AB237_3310 PF00390 Malic enzyme, N-terminal domain AB237_3311 PF00750 tRNA synthetases class I (R) AB237_3311 PF05746 DALR anticodon binding domain AB237_3311 PF03485 Arginyl tRNA synthetase N terminal domain AB237_3314 PF05726 Pirin C-terminal cupin domain AB237_3314 PF02678 Pirin AB237_3316 PF03551 Transcriptional regulator PadR-like family AB237_3317 PF01909 Nucleotidyltransferase domain AB237_3317 PF13427 Domain of unknown function (DUF4111) AB237_3318 PF00958 GMP synthase C terminal domain AB237_3318 PF02540 NAD synthase AB237_3318 PF00117 Glutamine amidotransferase class-I AB237_3319 PF04286 Protein of unknown function (DUF445) AB237_3320 PF07681 DoxX AB237_3321 PF09335 SNARE associated Golgi protein AB237_3323 PF13614 AAA domain AB237_3325 PF01722 BolA-like protein AB237_3328 PF01648 4'-phosphopantetheinyl transferase superfamily AB237_3329 PF12697 Alpha/beta hydrolase family AB237_3332 PF00975 Thioesterase domain AB237_3332 PF00501 AMP-binding enzyme AB237_3332 PF13193 AMP-binding enzyme C-terminal domain AB237_3332 PF00550 Phosphopantetheine attachment site AB237_3332 PF00668 Condensation domain AB237_3333 PF00668 Condensation domain AB237_3333 PF00550 Phosphopantetheine attachment site AB237_3333 PF00501 AMP-binding enzyme AB237_3333 PF07993 Male sterility protein AB237_3333 PF13193 AMP-binding enzyme C-terminal domain AB237_3334 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_3334 PF16197 Ketoacyl-synthetase C-terminal extension AB237_3334 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_3334 PF00550 Phosphopantetheine attachment site AB237_3334 PF14765 Polyketide synthase dehydratase AB237_3334 PF00975 Thioesterase domain AB237_3334 PF08242 Methyltransferase domain AB237_3335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_3335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_3335 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_3336 PF00501 AMP-binding enzyme AB237_3337 PF00196 Bacterial regulatory proteins, luxR family AB237_3337 PF03472 Autoinducer binding domain AB237_3338 PF03472 Autoinducer binding domain AB237_3338 PF00196 Bacterial regulatory proteins, luxR family AB237_3340 PF00765 Autoinducer synthase AB237_3341 PF07690 Major Facilitator Superfamily AB237_3341 PF00083 Sugar (and other) transporter AB237_3342 PF00378 Enoyl-CoA hydratase/isomerase AB237_3343 PF00378 Enoyl-CoA hydratase/isomerase AB237_3344 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AB237_3344 PF02770 Acyl-CoA dehydrogenase, middle domain AB237_3344 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AB237_3345 PF13193 AMP-binding enzyme C-terminal domain AB237_3345 PF00501 AMP-binding enzyme AB237_3346 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB237_3346 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB237_3347 PF00171 Aldehyde dehydrogenase family AB237_3349 PF00324 Amino acid permease AB237_3350 PF00324 Amino acid permease AB237_3351 PF01168 Alanine racemase, N-terminal domain AB237_3351 PF00842 Alanine racemase, C-terminal domain AB237_3352 PF01266 FAD dependent oxidoreductase AB237_3353 PF01037 Lrp/AsnC ligand binding domain AB237_3355 PF07715 TonB-dependent Receptor Plug Domain AB237_3355 PF00593 TonB dependent receptor AB237_3358 PF00849 RNA pseudouridylate synthase AB237_3361 PF08361 MAATS-type transcriptional repressor, C-terminal region AB237_3361 PF00440 Bacterial regulatory proteins, tetR family AB237_3363 PF00109 Beta-ketoacyl synthase, N-terminal domain AB237_3363 PF02801 Beta-ketoacyl synthase, C-terminal domain AB237_3368 PF00694 Aconitase C-terminal domain AB237_3368 PF00330 Aconitase family (aconitate hydratase) AB237_3369 PF00285 Citrate synthase, C-terminal domain AB237_3371 PF00392 Bacterial regulatory proteins, gntR family AB237_3371 PF07729 FCD domain AB237_3372 PF00155 Aminotransferase class I and II AB237_3373 PF09330 D-lactate dehydrogenase, membrane binding AB237_3373 PF01565 FAD binding domain AB237_3374 PF01070 FMN-dependent dehydrogenase AB237_3375 PF00392 Bacterial regulatory proteins, gntR family AB237_3375 PF07729 FCD domain AB237_3376 PF02652 L-lactate permease AB237_3377 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB237_3377 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB237_3377 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB237_3377 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB237_3379 PF00342 Phosphoglucose isomerase AB237_3380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB237_3380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB237_3380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB237_3381 PF00483 Nucleotidyl transferase AB237_3382 PF02397 Bacterial sugar transferase AB237_3383 PF00535 Glycosyl transferase family 2 AB237_3384 PF00534 Glycosyl transferases group 1 AB237_3386 PF00862 Sucrose synthase AB237_3386 PF00534 Glycosyl transferases group 1 AB237_3388 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AB237_3389 PF01575 MaoC like domain AB237_3391 PF05523 WxcM-like, C-terminal AB237_3392 PF16363 GDP-mannose 4,6 dehydratase AB237_3393 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AB237_3393 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AB237_3393 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AB237_3394 PF02563 Polysaccharide biosynthesis/export protein AB237_3394 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AB237_3394 PF10531 SLBB domain AB237_3395 PF13807 G-rich domain on putative tyrosine kinase AB237_3395 PF13614 AAA domain AB237_3395 PF02706 Chain length determinant protein AB237_3396 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB237_3396 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB237_3397 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB237_3397 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AB237_3398 PF03023 Lipid II flippase MurJ AB237_3399 PF01510 N-acetylmuramoyl-L-alanine amidase AB237_3400 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AB237_3400 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AB237_3402 PF04185 Phosphoesterase family AB237_3402 PF05506 Domain of unknown function (DUF756) AB237_3403 PF01138 3' exoribonuclease family, domain 1 AB237_3403 PF03725 3' exoribonuclease family, domain 2 AB237_3404 PF00487 Fatty acid desaturase AB237_3405 PF00175 Oxidoreductase NAD-binding domain AB237_3406 PF00440 Bacterial regulatory proteins, tetR family AB237_3407 PF00440 Bacterial regulatory proteins, tetR family AB237_3407 PF08360 QacR-like protein, C-terminal region AB237_3408 PF01323 DSBA-like thioredoxin domain AB237_3410 PF13419 Haloacid dehalogenase-like hydrolase AB237_3411 PF00106 short chain dehydrogenase AB237_3414 PF00696 Amino acid kinase family AB237_3414 PF00583 Acetyltransferase (GNAT) family AB237_3415 PF09084 NMT1/THI5 like AB237_3416 PF09084 NMT1/THI5 like AB237_3417 PF00296 Luciferase-like monooxygenase AB237_3418 PF00528 Binding-protein-dependent transport system inner membrane component AB237_3419 PF00005 ABC transporter AB237_3420 PF08362 YcdC-like protein, C-terminal region AB237_3420 PF00440 Bacterial regulatory proteins, tetR family AB237_3421 PF01048 Phosphorylase superfamily AB237_3423 PF06574 FAD synthetase AB237_3423 PF01687 Riboflavin kinase AB237_3424 PF08264 Anticodon-binding domain of tRNA AB237_3424 PF00133 tRNA synthetases class I (I, L, M and V) AB237_3424 PF06827 Zinc finger found in FPG and IleRS AB237_3425 PF01252 Signal peptidase (SPase) II AB237_3437 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB237_3438 PF07859 alpha/beta hydrolase fold AB237_3441 PF03466 LysR substrate binding domain AB237_3441 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB237_3442 PF01025 GrpE AB237_3443 PF00012 Hsp70 protein AB237_3447 PF13406 Transglycosylase SLT domain AB237_3448 PF02222 ATP-grasp domain AB237_3448 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AB237_3449 PF00731 AIR carboxylase AB237_3451 PF01225 Mur ligase family, catalytic domain AB237_3451 PF02875 Mur ligase family, glutamate ligase domain AB237_3451 PF08245 Mur ligase middle domain AB237_3453 PF01569 PAP2 superfamily AB237_3454 PF03741 Integral membrane protein TerC family AB237_3456 PF03738 Glutathionylspermidine synthase preATP-grasp AB237_3457 PF00355 Rieske [2Fe-2S] domain AB237_3458 PF01979 Amidohydrolase family AB237_3459 PF00156 Phosphoribosyl transferase domain AB237_3460 PF13098 Thioredoxin-like domain AB237_3460 PF10411 Disulfide bond isomerase protein N-terminus AB237_3461 PF01545 Cation efflux family AB237_3461 PF16916 Dimerisation domain of Zinc Transporter AB237_3462 PF10396 GTP-binding protein TrmE N-terminus AB237_3462 PF01926 50S ribosome-binding GTPase AB237_3462 PF12631 MnmE helical domain AB237_3463 PF02096 60Kd inner membrane protein AB237_3463 PF14849 YidC periplasmic domain