locus-tag class description C4X49_00005 PF00308 Bacterial dnaA protein C4X49_00005 PF08299 Bacterial dnaA protein helix-turn-helix C4X49_00005 PF11638 DnaA N-terminal domain C4X49_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C4X49_00010 PF02767 DNA polymerase III beta subunit, central domain C4X49_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C4X49_00015 PF02463 RecF/RecN/SMC N terminal domain C4X49_00020 PF01751 Toprim domain C4X49_00020 PF00204 DNA gyrase B C4X49_00020 PF00986 DNA gyrase B subunit, carboxyl terminus C4X49_00020 PF18053 DNA gyrase B subunit insert domain C4X49_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_00030 PF09335 SNARE associated Golgi protein C4X49_00035 PF12848 ABC transporter C4X49_00035 PF00005 ABC transporter C4X49_00055 PF01521 Iron-sulphur cluster biosynthesis C4X49_00065 PF03702 Anhydro-N-acetylmuramic acid kinase C4X49_00070 PF00579 tRNA synthetases class I (W and Y) C4X49_00110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4X49_00115 PF01252 Signal peptidase (SPase) II C4X49_00120 PF06827 Zinc finger found in FPG and IleRS C4X49_00120 PF08264 Anticodon-binding domain of tRNA C4X49_00120 PF00133 tRNA synthetases class I (I, L, M and V) C4X49_00125 PF01687 Riboflavin kinase C4X49_00125 PF06574 FAD synthetase C4X49_00135 PF01048 Phosphorylase superfamily C4X49_00140 PF00440 Bacterial regulatory proteins, tetR family C4X49_00140 PF08362 YcdC-like protein, C-terminal region C4X49_00145 PF00005 ABC transporter C4X49_00150 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_00155 PF00296 Luciferase-like monooxygenase C4X49_00160 PF09084 NMT1/THI5 like C4X49_00165 PF09084 NMT1/THI5 like C4X49_00170 PF00583 Acetyltransferase (GNAT) family C4X49_00170 PF00696 Amino acid kinase family C4X49_00185 PF00106 short chain dehydrogenase C4X49_00190 PF13419 Haloacid dehalogenase-like hydrolase C4X49_00200 PF01323 DSBA-like thioredoxin domain C4X49_00205 PF00440 Bacterial regulatory proteins, tetR family C4X49_00205 PF08360 QacR-like protein, C-terminal region C4X49_00210 PF00440 Bacterial regulatory proteins, tetR family C4X49_00215 PF00175 Oxidoreductase NAD-binding domain C4X49_00220 PF00487 Fatty acid desaturase C4X49_00225 PF03725 3' exoribonuclease family, domain 2 C4X49_00225 PF01138 3' exoribonuclease family, domain 1 C4X49_00245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C4X49_00245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C4X49_00250 PF01510 N-acetylmuramoyl-L-alanine amidase C4X49_00255 PF03023 Lipid II flippase MurJ C4X49_00260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4X49_00260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4X49_00265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4X49_00265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4X49_00270 PF13614 AAA domain C4X49_00270 PF13807 G-rich domain on putative tyrosine kinase C4X49_00270 PF02706 Chain length determinant protein C4X49_00275 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4X49_00280 PF02563 Polysaccharide biosynthesis/export protein C4X49_00280 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C4X49_00280 PF10531 SLBB domain C4X49_00285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4X49_00285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4X49_00285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4X49_00315 PF13477 Glycosyl transferase 4-like C4X49_00315 PF00534 Glycosyl transferases group 1 C4X49_00320 PF02397 Bacterial sugar transferase C4X49_00325 PF14602 Hexapeptide repeat of succinyl-transferase C4X49_00325 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_00325 PF17836 PglD N-terminal domain C4X49_00330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4X49_00355 PF00483 Nucleotidyl transferase C4X49_00360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4X49_00360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4X49_00360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4X49_00365 PF00342 Phosphoglucose isomerase C4X49_00370 PF16363 GDP-mannose 4,6 dehydratase C4X49_00375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4X49_00375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4X49_00375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4X49_00375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4X49_00380 PF02652 L-lactate permease C4X49_00385 PF07729 FCD domain C4X49_00385 PF00392 Bacterial regulatory proteins, gntR family C4X49_00390 PF01070 FMN-dependent dehydrogenase C4X49_00395 PF09330 D-lactate dehydrogenase, membrane binding C4X49_00395 PF01565 FAD binding domain C4X49_00400 PF00155 Aminotransferase class I and II C4X49_00410 PF07729 FCD domain C4X49_00410 PF00392 Bacterial regulatory proteins, gntR family C4X49_00420 PF00285 Citrate synthase, C-terminal domain C4X49_00425 PF00694 Aconitase C-terminal domain C4X49_00425 PF00330 Aconitase family (aconitate hydratase) C4X49_00445 PF13737 Transposase DDE domain C4X49_00455 PF13737 Transposase DDE domain C4X49_00470 PF13737 Transposase DDE domain C4X49_00480 PF00849 RNA pseudouridylate synthase C4X49_00495 PF07715 TonB-dependent Receptor Plug Domain C4X49_00495 PF00593 TonB dependent receptor C4X49_00505 PF01037 Lrp/AsnC ligand binding domain C4X49_00510 PF01266 FAD dependent oxidoreductase C4X49_00515 PF01168 Alanine racemase, N-terminal domain C4X49_00515 PF00842 Alanine racemase, C-terminal domain C4X49_00520 PF01042 Endoribonuclease L-PSP C4X49_00525 PF00324 Amino acid permease C4X49_00530 PF00324 Amino acid permease C4X49_00540 PF13737 Transposase DDE domain C4X49_00545 PF07728 AAA domain (dynein-related subfamily) C4X49_00545 PF12102 Domain of unknown function (DUF3578) C4X49_00580 PF13340 Putative transposase of IS4/5 family (DUF4096) C4X49_00600 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C4X49_00610 PF00271 Helicase conserved C-terminal domain C4X49_00610 PF00176 SNF2 family N-terminal domain C4X49_00610 PF12419 SNF2 Helicase protein C4X49_00695 PF01555 DNA methylase C4X49_00695 PF18273 Type III R-M EcoP15I C-terminal domain C4X49_00700 PF04851 Type III restriction enzyme, res subunit C4X49_00700 PF08774 VRR-NUC domain C4X49_00715 PF07120 Protein of unknown function (DUF1376) C4X49_00750 PF01722 BolA-like protein C4X49_00760 PF13614 AAA domain C4X49_00775 PF09335 SNARE associated Golgi protein C4X49_00780 PF07681 DoxX C4X49_00785 PF04286 Protein of unknown function (DUF445) C4X49_00790 PF00117 Glutamine amidotransferase class-I C4X49_00790 PF00958 GMP synthase C terminal domain C4X49_00790 PF02540 NAD synthase C4X49_00795 PF01909 Nucleotidyltransferase domain C4X49_00795 PF13427 Domain of unknown function (DUF4111) C4X49_00800 PF03551 Transcriptional regulator PadR-like family C4X49_00810 PF02678 Pirin C4X49_00810 PF05726 Pirin C-terminal cupin domain C4X49_00830 PF03485 Arginyl tRNA synthetase N terminal domain C4X49_00830 PF05746 DALR anticodon binding domain C4X49_00830 PF00750 tRNA synthetases class I (R) C4X49_00835 PF03949 Malic enzyme, NAD binding domain C4X49_00835 PF00390 Malic enzyme, N-terminal domain C4X49_00840 PF04261 Dyp-type peroxidase family C4X49_00845 PF01810 LysE type translocator C4X49_00850 PF00950 ABC 3 transport family C4X49_00855 PF00005 ABC transporter C4X49_00875 PF00119 ATP synthase A chain C4X49_00880 PF00137 ATP synthase subunit C C4X49_00885 PF00430 ATP synthase B/B' CF(0) C4X49_00890 PF00213 ATP synthase delta (OSCP) subunit C4X49_00895 PF00306 ATP synthase alpha/beta chain, C terminal domain C4X49_00895 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4X49_00895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4X49_00900 PF00231 ATP synthase C4X49_00905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4X49_00905 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4X49_00910 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C4X49_00920 PF00255 Glutathione peroxidase C4X49_00930 PF07690 Major Facilitator Superfamily C4X49_00935 PF00440 Bacterial regulatory proteins, tetR family C4X49_00940 PF00892 EamA-like transporter family C4X49_00945 PF01300 Telomere recombination C4X49_00950 PF02481 DNA recombination-mediator protein A C4X49_00950 PF17782 DprA winged helix domain C4X49_00960 PF01327 Polypeptide deformylase C4X49_00985 PF00440 Bacterial regulatory proteins, tetR family C4X49_01020 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_01030 PF03358 NADPH-dependent FMN reductase C4X49_01050 PF11842 Domain of unknown function (DUF3362) C4X49_01050 PF04055 Radical SAM superfamily C4X49_01050 PF08497 Radical SAM N-terminal C4X49_01065 PF11799 impB/mucB/samB family C-terminal domain C4X49_01065 PF00817 impB/mucB/samB family C4X49_01065 PF11798 IMS family HHH motif C4X49_01075 PF07690 Major Facilitator Superfamily C4X49_01080 PF03641 Possible lysine decarboxylase C4X49_01085 PF03741 Integral membrane protein TerC family C4X49_01085 PF03471 Transporter associated domain C4X49_01090 PF02810 SEC-C motif C4X49_01095 PF03458 UPF0126 domain C4X49_01100 PF07690 Major Facilitator Superfamily C4X49_01105 PF00521 DNA gyrase/topoisomerase IV, subunit A C4X49_01105 PF03989 DNA gyrase C-terminal domain, beta-propeller C4X49_01110 PF13193 AMP-binding enzyme C-terminal domain C4X49_01110 PF00501 AMP-binding enzyme C4X49_01125 PF00719 Inorganic pyrophosphatase C4X49_01130 PF03573 outer membrane porin, OprD family C4X49_01145 PF00701 Dihydrodipicolinate synthetase family C4X49_01150 PF00596 Class II Aldolase and Adducin N-terminal domain C4X49_01155 PF00155 Aminotransferase class I and II C4X49_01155 PF00392 Bacterial regulatory proteins, gntR family C4X49_01160 PF13335 Magnesium chelatase, subunit ChlI C-terminal C4X49_01160 PF01078 Magnesium chelatase, subunit ChlI C4X49_01170 PF00543 Nitrogen regulatory protein P-II C4X49_01175 PF00909 Ammonium Transporter Family C4X49_01180 PF03477 ATP cone domain C4X49_01185 PF01872 RibD C-terminal domain C4X49_01185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4X49_01195 PF00677 Lumazine binding domain C4X49_01215 PF02789 Cytosol aminopeptidase family, N-terminal domain C4X49_01215 PF00883 Cytosol aminopeptidase family, catalytic domain C4X49_01225 PF03739 Lipopolysaccharide export system permease LptF/LptG C4X49_01230 PF01676 Metalloenzyme superfamily C4X49_01230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C4X49_01235 PF00595 PDZ domain C4X49_01235 PF03572 Peptidase family S41 C4X49_01240 PF00158 Sigma-54 interaction domain C4X49_01240 PF02954 Bacterial regulatory protein, Fis family C4X49_01240 PF00072 Response regulator receiver domain C4X49_01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_01245 PF00512 His Kinase A (phospho-acceptor) domain C4X49_01250 PF00196 Bacterial regulatory proteins, luxR family C4X49_01250 PF00072 Response regulator receiver domain C4X49_01255 PF00768 D-alanyl-D-alanine carboxypeptidase C4X49_01260 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_01265 PF01842 ACT domain C4X49_01265 PF00742 Homoserine dehydrogenase C4X49_01265 PF03447 Homoserine dehydrogenase, NAD binding domain C4X49_01270 PF10411 Disulfide bond isomerase protein N-terminus C4X49_01270 PF13098 Thioredoxin-like domain C4X49_01275 PF00589 Phage integrase family C4X49_01275 PF02899 Phage integrase, N-terminal SAM-like domain C4X49_01285 PF07664 Ferrous iron transport protein B C terminus C4X49_01285 PF07670 Nucleoside recognition C4X49_01285 PF02421 Ferrous iron transport protein B C4X49_01295 PF08245 Mur ligase middle domain C4X49_01295 PF02875 Mur ligase family, glutamate ligase domain C4X49_01300 PF01098 Cell cycle protein C4X49_01305 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4X49_01310 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4X49_01315 PF00149 Calcineurin-like phosphoesterase C4X49_01320 PF00293 NUDIX domain C4X49_01325 PF13667 ThiC-associated domain C4X49_01325 PF01964 Radical SAM ThiC family C4X49_01340 PF00892 EamA-like transporter family C4X49_01345 PF02321 Outer membrane efflux protein C4X49_01350 PF01895 PhoU domain C4X49_01355 PF04362 Bacterial Fe(2+) trafficking C4X49_01360 PF00206 Lyase C4X49_01360 PF14698 Argininosuccinate lyase C-terminal C4X49_01365 PF07694 5TMR of 5TMR-LYT C4X49_01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_01365 PF06580 Histidine kinase C4X49_01370 PF00072 Response regulator receiver domain C4X49_01370 PF04397 LytTr DNA-binding domain C4X49_01375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C4X49_01375 PF03900 Porphobilinogen deaminase, C-terminal domain C4X49_01400 PF00816 H-NS histone family C4X49_01415 PF03958 Bacterial type II/III secretion system short domain C4X49_01415 PF00263 Bacterial type II and III secretion system protein C4X49_01420 PF12401 Protein of unknown function (DUF2662) C4X49_01420 PF00498 FHA domain C4X49_01425 PF13419 Haloacid dehalogenase-like hydrolase C4X49_01430 PF04715 Anthranilate synthase component I, N terminal region C4X49_01430 PF00425 chorismate binding enzyme C4X49_01455 PF03143 Elongation factor Tu C-terminal domain C4X49_01455 PF03144 Elongation factor Tu domain 2 C4X49_01455 PF00009 Elongation factor Tu GTP binding domain C4X49_01465 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C4X49_01470 PF00467 KOW motif C4X49_01470 PF02357 Transcription termination factor nusG C4X49_01475 PF03946 Ribosomal protein L11, N-terminal domain C4X49_01475 PF00298 Ribosomal protein L11, RNA binding domain C4X49_01480 PF00687 Ribosomal protein L1p/L10e family C4X49_01485 PF00466 Ribosomal protein L10 C4X49_01490 PF00542 Ribosomal protein L7/L12 C-terminal domain C4X49_01490 PF16320 Ribosomal protein L7/L12 dimerisation domain C4X49_01495 PF04565 RNA polymerase Rpb2, domain 3 C4X49_01495 PF00562 RNA polymerase Rpb2, domain 6 C4X49_01495 PF04561 RNA polymerase Rpb2, domain 2 C4X49_01495 PF04560 RNA polymerase Rpb2, domain 7 C4X49_01495 PF04563 RNA polymerase beta subunit C4X49_01495 PF10385 RNA polymerase beta subunit external 1 domain C4X49_01500 PF04998 RNA polymerase Rpb1, domain 5 C4X49_01500 PF05000 RNA polymerase Rpb1, domain 4 C4X49_01500 PF04983 RNA polymerase Rpb1, domain 3 C4X49_01500 PF00623 RNA polymerase Rpb1, domain 2 C4X49_01500 PF04997 RNA polymerase Rpb1, domain 1 C4X49_01520 PF00561 alpha/beta hydrolase fold C4X49_01525 PF13726 Na+-H+ antiporter family C4X49_01525 PF03553 Na+/H+ antiporter family C4X49_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_01540 PF00183 Hsp90 protein C4X49_01555 PF01323 DSBA-like thioredoxin domain C4X49_01565 PF00376 MerR family regulatory protein C4X49_01565 PF09278 MerR, DNA binding C4X49_01585 PF00108 Thiolase, N-terminal domain C4X49_01585 PF02803 Thiolase, C-terminal domain C4X49_01590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4X49_01590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4X49_01590 PF00378 Enoyl-CoA hydratase/isomerase C4X49_01610 PF02151 UvrB/uvrC motif C4X49_01610 PF01541 GIY-YIG catalytic domain C4X49_01610 PF08459 UvrC Helix-hairpin-helix N-terminal C4X49_01620 PF00872 Transposase, Mutator family C4X49_01630 PF01066 CDP-alcohol phosphatidyltransferase C4X49_01635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4X49_01635 PF12833 Helix-turn-helix domain C4X49_01635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4X49_01635 PF02805 Metal binding domain of Ada C4X49_01660 PF13533 Biotin-lipoyl like C4X49_01665 PF03652 Holliday junction resolvase C4X49_01670 PF02622 Uncharacterized ACR, COG1678 C4X49_01675 PF02463 RecF/RecN/SMC N terminal domain C4X49_01685 PF06865 Pyrimidine/purine nucleoside phosphorylase C4X49_01690 PF08032 RNA 2'-O ribose methyltransferase substrate binding C4X49_01690 PF00588 SpoU rRNA Methylase family C4X49_01700 PF01121 Dephospho-CoA kinase C4X49_01705 PF01478 Type IV leader peptidase family C4X49_01705 PF06750 Bacterial Peptidase A24 N-terminal domain C4X49_01710 PF00482 Type II secretion system (T2SS), protein F C4X49_01715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4X49_01715 PF00437 Type II/IV secretion system protein C4X49_01720 PF00121 Triosephosphate isomerase C4X49_01725 PF03840 Preprotein translocase SecG subunit C4X49_01745 PF17384 RimP C-terminal SH3 domain C4X49_01745 PF02576 RimP N-terminal domain C4X49_01750 PF08529 NusA N-terminal domain C4X49_01750 PF00575 S1 RNA binding domain C4X49_01750 PF13184 NusA-like KH domain C4X49_01755 PF08364 Bacterial translation initiation factor IF-2 associated region C4X49_01755 PF00009 Elongation factor Tu GTP binding domain C4X49_01755 PF11987 Translation-initiation factor 2 C4X49_01755 PF04760 Translation initiation factor IF-2, N-terminal region C4X49_01760 PF02033 Ribosome-binding factor A C4X49_01770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C4X49_01780 PF00361 Proton-conducting membrane transporter C4X49_01785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4X49_01790 PF13244 Domain of unknown function (DUF4040) C4X49_01790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4X49_01790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C4X49_01790 PF00361 Proton-conducting membrane transporter C4X49_01805 PF01502 Phosphoribosyl-AMP cyclohydrolase C4X49_01810 PF01494 FAD binding domain C4X49_01815 PF03109 ABC1 family C4X49_01825 PF01209 ubiE/COQ5 methyltransferase family C4X49_01835 PF03976 Polyphosphate kinase 2 (PPK2) C4X49_01845 PF17946 RecC C-terminal domain C4X49_01850 PF13361 UvrD-like helicase C-terminal domain C4X49_01850 PF00580 UvrD/REP helicase N-terminal domain C4X49_01850 PF12705 PD-(D/E)XK nuclease superfamily C4X49_01855 PF13538 UvrD-like helicase C-terminal domain C4X49_01865 PF00312 Ribosomal protein S15 C4X49_01870 PF00575 S1 RNA binding domain C4X49_01870 PF03725 3' exoribonuclease family, domain 2 C4X49_01870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C4X49_01870 PF00013 KH domain C4X49_01870 PF01138 3' exoribonuclease family, domain 1 C4X49_01875 PF01544 CorA-like Mg2+ transporter protein C4X49_01885 PF00226 DnaJ domain C4X49_01885 PF01556 DnaJ C terminal domain C4X49_01895 PF01430 Hsp33 protein C4X49_01900 PF00999 Sodium/hydrogen exchanger family C4X49_01900 PF02254 TrkA-N domain C4X49_01905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C4X49_01905 PF00270 DEAD/DEAH box helicase C4X49_01905 PF18074 Primosomal protein N C-terminal domain C4X49_01905 PF17764 3′ DNA-binding domain (3′BD) C4X49_01905 PF00271 Helicase conserved C-terminal domain C4X49_01910 PF00482 Type II secretion system (T2SS), protein F C4X49_01915 PF08334 Type II secretion system (T2SS), protein G C4X49_01915 PF07963 Prokaryotic N-terminal methylation motif C4X49_01925 PF01588 Putative tRNA binding domain C4X49_01930 PF00795 Carbon-nitrogen hydrolase C4X49_01935 PF00571 CBS domain C4X49_01935 PF03471 Transporter associated domain C4X49_01940 PF01206 Sulfurtransferase TusA C4X49_01955 PF01177 Asp/Glu/Hydantoin racemase C4X49_01965 PF00762 Ferrochelatase C4X49_01970 PF00753 Metallo-beta-lactamase superfamily C4X49_01975 PF03884 DNA gyrase inhibitor YacG C4X49_01995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C4X49_02010 PF01197 Ribosomal protein L31 C4X49_02015 PF03109 ABC1 family C4X49_02020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_02020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4X49_02025 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_02025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4X49_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_02030 PF01554 MatE C4X49_02040 PF06969 HemN C-terminal domain C4X49_02040 PF04055 Radical SAM superfamily C4X49_02065 PF13193 AMP-binding enzyme C-terminal domain C4X49_02065 PF00501 AMP-binding enzyme C4X49_02070 PF12111 Polyribonucleotide phosphorylase C terminal C4X49_02070 PF00575 S1 RNA binding domain C4X49_02070 PF10150 Ribonuclease E/G family C4X49_02080 PF00849 RNA pseudouridylate synthase C4X49_02080 PF01479 S4 domain C4X49_02085 PF13419 Haloacid dehalogenase-like hydrolase C4X49_02090 PF13280 WYL domain C4X49_02090 PF08279 HTH domain C4X49_02095 PF02798 Glutathione S-transferase, N-terminal domain C4X49_02105 PF03466 LysR substrate binding domain C4X49_02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_02110 PF13737 Transposase DDE domain C4X49_02115 PF12706 Beta-lactamase superfamily domain C4X49_02120 PF00141 Peroxidase C4X49_02125 PF02896 PEP-utilising enzyme, TIM barrel domain C4X49_02125 PF00391 PEP-utilising enzyme, mobile domain C4X49_02125 PF05524 PEP-utilising enzyme, N-terminal C4X49_02125 PF01590 GAF domain C4X49_02130 PF00293 NUDIX domain C4X49_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_02140 PF03466 LysR substrate binding domain C4X49_02150 PF00330 Aconitase family (aconitate hydratase) C4X49_02155 PF00694 Aconitase C-terminal domain C4X49_02165 PF00180 Isocitrate/isopropylmalate dehydrogenase C4X49_02180 PF01176 Translation initiation factor 1A / IF-1 C4X49_02190 PF01416 tRNA pseudouridine synthase C4X49_02210 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4X49_02210 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4X49_02220 PF00375 Sodium:dicarboxylate symporter family C4X49_02230 PF03279 Bacterial lipid A biosynthesis acyltransferase C4X49_02235 PF01810 LysE type translocator C4X49_02250 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_02250 PF00107 Zinc-binding dehydrogenase C4X49_02255 PF01638 HxlR-like helix-turn-helix C4X49_02265 PF01751 Toprim domain C4X49_02265 PF01396 Topoisomerase DNA binding C4 zinc finger C4X49_02265 PF08272 Topoisomerase I zinc-ribbon-like C4X49_02265 PF01131 DNA topoisomerase C4X49_02280 PF00580 UvrD/REP helicase N-terminal domain C4X49_02280 PF13361 UvrD-like helicase C-terminal domain C4X49_02285 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C4X49_02305 PF02254 TrkA-N domain C4X49_02305 PF00999 Sodium/hydrogen exchanger family C4X49_02310 PF00471 Ribosomal protein L33 C4X49_02315 PF00830 Ribosomal L28 family C4X49_02320 PF00171 Aldehyde dehydrogenase family C4X49_02330 PF00551 Formyl transferase C4X49_02330 PF01842 ACT domain C4X49_02340 PF01618 MotA/TolQ/ExbB proton channel family C4X49_02350 PF01625 Peptide methionine sulfoxide reductase C4X49_02360 PF00186 Dihydrofolate reductase C4X49_02365 PF00303 Thymidylate synthase C4X49_02380 PF01790 Prolipoprotein diacylglyceryl transferase C4X49_02400 PF00902 Sec-independent protein translocase protein (TatC) C4X49_02405 PF02416 mttA/Hcf106 family C4X49_02410 PF02416 mttA/Hcf106 family C4X49_02420 PF01725 Ham1 family C4X49_02430 PF00561 alpha/beta hydrolase fold C4X49_02430 PF07021 Methionine biosynthesis protein MetW C4X49_02435 PF00561 alpha/beta hydrolase fold C4X49_02440 PF00682 HMGL-like C4X49_02440 PF08502 LeuA allosteric (dimerisation) domain C4X49_02445 PF13640 2OG-Fe(II) oxygenase superfamily C4X49_02445 PF18331 PKHD-type hydroxylase C-terminal domain C4X49_02450 PF00593 TonB dependent receptor C4X49_02450 PF07715 TonB-dependent Receptor Plug Domain C4X49_02455 PF05697 Bacterial trigger factor protein (TF) C4X49_02455 PF05698 Bacterial trigger factor protein (TF) C-terminus C4X49_02455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4X49_02460 PF00574 Clp protease C4X49_02465 PF10431 C-terminal, D2-small domain, of ClpB protein C4X49_02465 PF07724 AAA domain (Cdc48 subfamily) C4X49_02465 PF06689 ClpX C4-type zinc finger C4X49_02480 PF05681 Fumarate hydratase (Fumerase) C4X49_02480 PF05683 Fumarase C-terminus C4X49_02485 PF07085 DRTGG domain C4X49_02485 PF01515 Phosphate acetyl/butaryl transferase C4X49_02490 PF00871 Acetokinase family C4X49_02495 PF00920 Dehydratase family C4X49_02500 PF01081 KDPG and KHG aldolase C4X49_02505 PF02447 GntP family permease C4X49_02510 PF01202 Shikimate kinase C4X49_02515 PF00171 Aldehyde dehydrogenase family C4X49_02520 PF00171 Aldehyde dehydrogenase family C4X49_02525 PF00561 alpha/beta hydrolase fold C4X49_02535 PF00933 Glycosyl hydrolase family 3 N terminal domain C4X49_02540 PF00595 PDZ domain C4X49_02540 PF11818 C-terminal domain of tail specific protease (DUF3340) C4X49_02540 PF03572 Peptidase family S41 C4X49_02540 PF17804 Tail specific protease N-terminal domain C4X49_02545 PF00534 Glycosyl transferases group 1 C4X49_02545 PF13439 Glycosyltransferase Family 4 C4X49_02550 PF01569 PAP2 superfamily C4X49_02555 PF04384 Iron-sulphur cluster assembly C4X49_02560 PF00334 Nucleoside diphosphate kinase C4X49_02565 PF04055 Radical SAM superfamily C4X49_02575 PF13464 Domain of unknown function (DUF4115) C4X49_02580 PF04551 GcpE protein C4X49_02585 PF13393 Histidyl-tRNA synthetase C4X49_02585 PF03129 Anticodon binding domain C4X49_02595 PF13360 PQQ-like domain C4X49_02600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4X49_02600 PF01926 50S ribosome-binding GTPase C4X49_02610 PF02556 Preprotein translocase subunit SecB C4X49_02615 PF00462 Glutaredoxin C4X49_02625 PF03193 RsgA GTPase C4X49_02630 PF00929 Exonuclease C4X49_02645 PF02321 Outer membrane efflux protein C4X49_02650 PF00005 ABC transporter C4X49_02650 PF12704 MacB-like periplasmic core domain C4X49_02650 PF02687 FtsX-like permease family C4X49_02655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4X49_02670 PF09334 tRNA synthetases class I (M) C4X49_02670 PF13603 Leucyl-tRNA synthetase, Domain 2 C4X49_02670 PF00133 tRNA synthetases class I (I, L, M and V) C4X49_02670 PF08264 Anticodon-binding domain of tRNA C4X49_02680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4X49_02680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4X49_02680 PF00205 Thiamine pyrophosphate enzyme, central domain C4X49_02685 PF10369 Small subunit of acetolactate synthase C4X49_02690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C4X49_02690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C4X49_02695 PF00563 EAL domain C4X49_02695 PF00990 Diguanylate cyclase, GGDEF domain C4X49_02695 PF03707 Bacterial signalling protein N terminal repeat C4X49_02800 PF00107 Zinc-binding dehydrogenase C4X49_02800 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_02805 PF00106 short chain dehydrogenase C4X49_02810 PF03466 LysR substrate binding domain C4X49_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_02815 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_02815 PF00107 Zinc-binding dehydrogenase C4X49_02820 PF00698 Acyl transferase domain C4X49_02820 PF08659 KR domain C4X49_02820 PF02801 Beta-ketoacyl synthase, C-terminal domain C4X49_02820 PF14765 Polyketide synthase dehydratase C4X49_02820 PF16197 Ketoacyl-synthetase C-terminal extension C4X49_02820 PF00109 Beta-ketoacyl synthase, N-terminal domain C4X49_02820 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_02820 PF00550 Phosphopantetheine attachment site C4X49_02825 PF02583 Metal-sensitive transcriptional repressor C4X49_02830 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_02830 PF00107 Zinc-binding dehydrogenase C4X49_02835 PF00756 Putative esterase C4X49_02850 PF00465 Iron-containing alcohol dehydrogenase C4X49_02860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_02870 PF00440 Bacterial regulatory proteins, tetR family C4X49_02870 PF16925 Tetracyclin repressor-like, C-terminal domain C4X49_02875 PF16884 N-terminal domain of oxidoreductase C4X49_02875 PF00107 Zinc-binding dehydrogenase C4X49_02885 PF04151 Bacterial pre-peptidase C-terminal domain C4X49_02900 PF16658 Class II release factor RF3, C-terminal domain C4X49_02900 PF03144 Elongation factor Tu domain 2 C4X49_02900 PF00009 Elongation factor Tu GTP binding domain C4X49_02915 PF01026 TatD related DNase C4X49_02920 PF00330 Aconitase family (aconitate hydratase) C4X49_02920 PF00694 Aconitase C-terminal domain C4X49_02925 PF00899 ThiF family C4X49_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_02935 PF03466 LysR substrate binding domain C4X49_02945 PF01207 Dihydrouridine synthase (Dus) C4X49_02950 PF00589 Phage integrase family C4X49_02975 PF00872 Transposase, Mutator family C4X49_02985 PF02421 Ferrous iron transport protein B C4X49_02985 PF07664 Ferrous iron transport protein B C terminus C4X49_02985 PF07670 Nucleoside recognition C4X49_03000 PF13411 MerR HTH family regulatory protein C4X49_03005 PF03960 ArsC family C4X49_03010 PF01022 Bacterial regulatory protein, arsR family C4X49_03020 PF01758 Sodium Bile acid symporter family C4X49_03025 PF03358 NADPH-dependent FMN reductase C4X49_03030 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_03040 PF00872 Transposase, Mutator family C4X49_03050 PF07690 Major Facilitator Superfamily C4X49_03060 PF00892 EamA-like transporter family C4X49_03065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C4X49_03065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4X49_03070 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C4X49_03075 PF02233 NAD(P) transhydrogenase beta subunit C4X49_03080 PF00106 short chain dehydrogenase C4X49_03090 PF01261 Xylose isomerase-like TIM barrel C4X49_03095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4X49_03095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4X49_03100 PF00378 Enoyl-CoA hydratase/isomerase C4X49_03105 PF00512 His Kinase A (phospho-acceptor) domain C4X49_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_03105 PF01627 Hpt domain C4X49_03105 PF00072 Response regulator receiver domain C4X49_03105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C4X49_03105 PF00672 HAMP domain C4X49_03110 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_03120 PF05958 tRNA (Uracil-5-)-methyltransferase C4X49_03125 PF02824 TGS domain C4X49_03125 PF13291 ACT domain C4X49_03125 PF04607 Region found in RelA / SpoT proteins C4X49_03135 PF03819 MazG nucleotide pyrophosphohydrolase domain C4X49_03145 PF12626 Polymerase A arginine-rich C-terminus C4X49_03145 PF01743 Poly A polymerase head domain C4X49_03145 PF12627 Probable RNA and SrmB- binding site of polymerase A C4X49_03150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C4X49_03155 PF02548 Ketopantoate hydroxymethyltransferase C4X49_03160 PF02569 Pantoate-beta-alanine ligase C4X49_03165 PF03668 P-loop ATPase protein family C4X49_03170 PF00381 PTS HPr component phosphorylation site C4X49_03175 PF04751 Protein of unknown function (DUF615) C4X49_03180 PF00501 AMP-binding enzyme C4X49_03180 PF13193 AMP-binding enzyme C-terminal domain C4X49_03185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4X49_03185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4X49_03185 PF02824 TGS domain C4X49_03185 PF03129 Anticodon binding domain C4X49_03190 PF00707 Translation initiation factor IF-3, C-terminal domain C4X49_03190 PF05198 Translation initiation factor IF-3, N-terminal domain C4X49_03195 PF02798 Glutathione S-transferase, N-terminal domain C4X49_03195 PF00043 Glutathione S-transferase, C-terminal domain C4X49_03200 PF09335 SNARE associated Golgi protein C4X49_03205 PF07690 Major Facilitator Superfamily C4X49_03210 PF01632 Ribosomal protein L35 C4X49_03215 PF00453 Ribosomal protein L20 C4X49_03235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4X49_03235 PF01409 tRNA synthetases class II core domain (F) C4X49_03240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C4X49_03240 PF03483 B3/4 domain C4X49_03240 PF03484 tRNA synthetase B5 domain C4X49_03240 PF03147 Ferredoxin-fold anticodon binding domain C4X49_03240 PF01588 Putative tRNA binding domain C4X49_03245 PF00216 Bacterial DNA-binding protein C4X49_03260 PF07498 Rho termination factor, N-terminal domain C4X49_03260 PF07497 Rho termination factor, RNA-binding domain C4X49_03260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4X49_03265 PF00085 Thioredoxin C4X49_03270 PF02541 Ppx/GppA phosphatase family C4X49_03275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C4X49_03280 PF11734 TilS substrate C-terminal domain C4X49_03280 PF09179 TilS substrate binding domain C4X49_03280 PF01171 PP-loop family C4X49_03285 PF14748 Pyrroline-5-carboxylate reductase dimerisation C4X49_03285 PF03807 NADP oxidoreductase coenzyme F420-dependent C4X49_03290 PF02325 YGGT family C4X49_03295 PF01612 3'-5' exonuclease C4X49_03295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C4X49_03295 PF00476 DNA polymerase family A C4X49_03295 PF01367 5'-3' exonuclease, C-terminal SAM fold C4X49_03315 PF00437 Type II/IV secretion system protein C4X49_03320 PF02566 OsmC-like protein C4X49_03325 PF01047 MarR family C4X49_03335 PF00795 Carbon-nitrogen hydrolase C4X49_03380 PF04963 Sigma-54 factor, core binding domain C4X49_03380 PF00309 Sigma-54 factor, Activator interacting domain (AID) C4X49_03380 PF04552 Sigma-54, DNA binding domain C4X49_03385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C4X49_03390 PF01722 BolA-like protein C4X49_03395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4X49_03400 PF01634 ATP phosphoribosyltransferase C4X49_03405 PF00815 Histidinol dehydrogenase C4X49_03410 PF00155 Aminotransferase class I and II C4X49_03415 PF00425 chorismate binding enzyme C4X49_03415 PF04715 Anthranilate synthase component I, N terminal region C4X49_03430 PF00293 NUDIX domain C4X49_03435 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_03440 PF00814 Glycoprotease family C4X49_03445 PF04445 Putative SAM-dependent methyltransferase C4X49_03455 PF00756 Putative esterase C4X49_03465 PF00834 Ribulose-phosphate 3 epimerase family C4X49_03480 PF07731 Multicopper oxidase C4X49_03480 PF07732 Multicopper oxidase C4X49_03480 PF00394 Multicopper oxidase C4X49_03495 PF00893 Small Multidrug Resistance protein C4X49_03500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4X49_03500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C4X49_03505 PF01960 ArgJ family C4X49_03510 PF02445 Quinolinate synthetase A protein C4X49_03535 PF00962 Adenosine/AMP deaminase C4X49_03540 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_03540 PF00107 Zinc-binding dehydrogenase C4X49_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_03545 PF03466 LysR substrate binding domain C4X49_03550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_03550 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_03550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_03555 PF07690 Major Facilitator Superfamily C4X49_03560 PF02515 CoA-transferase family III C4X49_03570 PF14537 Cytochrome c3 C4X49_03570 PF00890 FAD binding domain C4X49_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_03575 PF03466 LysR substrate binding domain C4X49_03585 PF07690 Major Facilitator Superfamily C4X49_03595 PF03466 LysR substrate binding domain C4X49_03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_03605 PF01546 Peptidase family M20/M25/M40 C4X49_03605 PF07687 Peptidase dimerisation domain C4X49_03610 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4X49_03610 PF12833 Helix-turn-helix domain C4X49_03620 PF01810 LysE type translocator C4X49_03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_03625 PF03466 LysR substrate binding domain C4X49_03635 PF08267 Cobalamin-independent synthase, N-terminal domain C4X49_03635 PF01717 Cobalamin-independent synthase, Catalytic domain C4X49_03640 PF01613 Flavin reductase like domain C4X49_03660 PF17074 Darcynin, domain of unknown function C4X49_03665 PF00268 Ribonucleotide reductase, small chain C4X49_03675 PF02867 Ribonucleotide reductase, barrel domain C4X49_03675 PF03477 ATP cone domain C4X49_03675 PF00317 Ribonucleotide reductase, all-alpha domain C4X49_03685 PF00072 Response regulator receiver domain C4X49_03685 PF00486 Transcriptional regulatory protein, C terminal C4X49_03690 PF00512 His Kinase A (phospho-acceptor) domain C4X49_03690 PF00672 HAMP domain C4X49_03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_03705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C4X49_03710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4X49_03715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4X49_03715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4X49_03725 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C4X49_03725 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C4X49_03725 PF10531 SLBB domain C4X49_03730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4X49_03730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4X49_03730 PF00384 Molybdopterin oxidoreductase C4X49_03735 PF00146 NADH dehydrogenase C4X49_03740 PF12838 4Fe-4S dicluster domain C4X49_03745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C4X49_03750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4X49_03755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4X49_03755 PF00361 Proton-conducting membrane transporter C4X49_03760 PF00361 Proton-conducting membrane transporter C4X49_03765 PF00361 Proton-conducting membrane transporter C4X49_03775 PF00313 'Cold-shock' DNA-binding domain C4X49_03780 PF03466 LysR substrate binding domain C4X49_03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_03785 PF00970 Oxidoreductase FAD-binding domain C4X49_03785 PF00175 Oxidoreductase NAD-binding domain C4X49_03800 PF05552 Conserved TM helix C4X49_03815 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_03820 PF13533 Biotin-lipoyl like C4X49_03845 PF01588 Putative tRNA binding domain C4X49_03845 PF09334 tRNA synthetases class I (M) C4X49_03855 PF10609 NUBPL iron-transfer P-loop NTPase C4X49_03865 PF01048 Phosphorylase superfamily C4X49_03880 PF00692 dUTPase C4X49_03905 PF00872 Transposase, Mutator family C4X49_03920 PF01207 Dihydrouridine synthase (Dus) C4X49_03930 PF02978 Signal peptide binding domain C4X49_03930 PF00448 SRP54-type protein, GTPase domain C4X49_03930 PF02881 SRP54-type protein, helical bundle domain C4X49_03935 PF03309 Type III pantothenate kinase C4X49_03945 PF01925 Sulfite exporter TauE/SafE C4X49_03955 PF02463 RecF/RecN/SMC N terminal domain C4X49_03955 PF06470 SMC proteins Flexible Hinge Domain C4X49_03965 PF01653 NAD-dependent DNA ligase adenylation domain C4X49_03965 PF12826 Helix-hairpin-helix motif C4X49_03965 PF03120 NAD-dependent DNA ligase OB-fold domain C4X49_03965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C4X49_03965 PF00533 BRCA1 C Terminus (BRCT) domain C4X49_03970 PF00210 Ferritin-like domain C4X49_03975 PF07690 Major Facilitator Superfamily C4X49_03980 PF00982 Glycosyltransferase family 20 C4X49_03985 PF02358 Trehalose-phosphatase C4X49_03990 PF08241 Methyltransferase domain C4X49_03990 PF12697 Alpha/beta hydrolase family C4X49_03995 PF04055 Radical SAM superfamily C4X49_03995 PF00202 Aminotransferase class-III C4X49_03995 PF06968 Biotin and Thiamin Synthesis associated domain C4X49_04000 PF00155 Aminotransferase class I and II C4X49_04030 PF00849 RNA pseudouridylate synthase C4X49_04030 PF01479 S4 domain C4X49_04035 PF04079 Segregation and condensation complex subunit ScpB C4X49_04040 PF02616 Segregation and condensation protein ScpA C4X49_04045 PF01300 Telomere recombination C4X49_04050 PF04315 Elongation factor P hydroxylase C4X49_04055 PF02620 Large ribosomal RNA subunit accumulation protein YceD C4X49_04060 PF01783 Ribosomal L32p protein family C4X49_04065 PF00698 Acyl transferase domain C4X49_04075 PF00550 Phosphopantetheine attachment site C4X49_04080 PF04972 BON domain C4X49_04080 PF01476 LysM domain C4X49_04085 PF02581 Thiamine monophosphate synthase C4X49_04085 PF03070 TENA/THI-4/PQQC family C4X49_04085 PF08543 Phosphomethylpyrimidine kinase C4X49_04095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4X49_04110 PF02261 Aspartate decarboxylase C4X49_04115 PF01195 Peptidyl-tRNA hydrolase C4X49_04120 PF01386 Ribosomal L25p family C4X49_04125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C4X49_04125 PF14572 Phosphoribosyl synthetase-associated domain C4X49_04150 PF00288 GHMP kinases N terminal domain C4X49_04150 PF08544 GHMP kinases C terminal C4X49_04155 PF03550 Outer membrane lipoprotein LolB C4X49_04165 PF01488 Shikimate / quinate 5-dehydrogenase C4X49_04165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C4X49_04165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C4X49_04170 PF08278 DNA primase DnaG DnaB-binding C4X49_04170 PF10410 DnaB-helicase binding domain of primase C4X49_04170 PF08275 DNA primase catalytic core, N-terminal domain C4X49_04170 PF01807 CHC2 zinc finger C4X49_04175 PF13525 Outer membrane lipoprotein C4X49_04180 PF00849 RNA pseudouridylate synthase C4X49_04180 PF01479 S4 domain C4X49_04190 PF03358 NADPH-dependent FMN reductase C4X49_04195 PF01668 SmpB protein C4X49_04335 PF00872 Transposase, Mutator family C4X49_04370 PF00589 Phage integrase family C4X49_04370 PF13356 Arm DNA-binding domain C4X49_04375 PF01467 Cytidylyltransferase-like C4X49_04380 PF00037 4Fe-4S binding domain C4X49_04400 PF03466 LysR substrate binding domain C4X49_04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_04405 PF00180 Isocitrate/isopropylmalate dehydrogenase C4X49_04410 PF02028 BCCT, betaine/carnitine/choline family transporter C4X49_04415 PF07859 alpha/beta hydrolase fold C4X49_04420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4X49_04420 PF00355 Rieske [2Fe-2S] domain C4X49_04425 PF00171 Aldehyde dehydrogenase family C4X49_04430 PF00175 Oxidoreductase NAD-binding domain C4X49_04430 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_04430 PF00970 Oxidoreductase FAD-binding domain C4X49_04445 PF00795 Carbon-nitrogen hydrolase C4X49_04445 PF02540 NAD synthase C4X49_04455 PF02678 Pirin C4X49_04455 PF05726 Pirin C-terminal cupin domain C4X49_04465 PF00109 Beta-ketoacyl synthase, N-terminal domain C4X49_04465 PF02801 Beta-ketoacyl synthase, C-terminal domain C4X49_04475 PF00164 Ribosomal protein S12/S23 C4X49_04480 PF00177 Ribosomal protein S7p/S5e C4X49_04485 PF14492 Elongation Factor G, domain II C4X49_04485 PF00009 Elongation factor Tu GTP binding domain C4X49_04485 PF03144 Elongation factor Tu domain 2 C4X49_04485 PF03764 Elongation factor G, domain IV C4X49_04485 PF00679 Elongation factor G C-terminus C4X49_04490 PF00009 Elongation factor Tu GTP binding domain C4X49_04490 PF03144 Elongation factor Tu domain 2 C4X49_04490 PF03143 Elongation factor Tu C-terminal domain C4X49_04505 PF00583 Acetyltransferase (GNAT) family C4X49_04510 PF04376 Arginine-tRNA-protein transferase, N terminus C4X49_04510 PF04377 Arginine-tRNA-protein transferase, C terminus C4X49_04515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C4X49_04520 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_04525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C4X49_04525 PF01580 FtsK/SpoIIIE family C4X49_04525 PF17854 FtsK alpha domain C4X49_04525 PF09397 Ftsk gamma domain C4X49_04530 PF01810 LysE type translocator C4X49_04540 PF03776 Septum formation topological specificity factor MinE C4X49_04545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4X49_04550 PF03775 Septum formation inhibitor MinC, C-terminal domain C4X49_04560 PF01553 Acyltransferase C4X49_04565 PF00691 OmpA family C4X49_04565 PF13488 Glycine zipper C4X49_04570 PF00580 UvrD/REP helicase N-terminal domain C4X49_04570 PF13361 UvrD-like helicase C-terminal domain C4X49_04575 PF00692 dUTPase C4X49_04580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4X49_04580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4X49_04580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4X49_04580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4X49_04585 PF00696 Amino acid kinase family C4X49_04595 PF13230 Glutamine amidotransferases class-II C4X49_04600 PF01814 Hemerythrin HHE cation binding domain C4X49_04615 PF03658 RnfH family Ubiquitin C4X49_04620 PF04355 SmpA / OmlA family C4X49_04625 PF01475 Ferric uptake regulator family C4X49_04630 PF00437 Type II/IV secretion system protein C4X49_04635 PF00437 Type II/IV secretion system protein C4X49_04640 PF01168 Alanine racemase, N-terminal domain C4X49_04650 PF00149 Calcineurin-like phosphoesterase C4X49_04650 PF12320 Type 5 capsule protein repressor C-terminal domain C4X49_04670 PF01370 NAD dependent epimerase/dehydratase family C4X49_04670 PF08338 Domain of unknown function (DUF1731) C4X49_04675 PF01266 FAD dependent oxidoreductase C4X49_04680 PF00490 Delta-aminolevulinic acid dehydratase C4X49_04685 PF03061 Thioesterase superfamily C4X49_04690 PF13533 Biotin-lipoyl like C4X49_04695 PF07690 Major Facilitator Superfamily C4X49_04865 PF13333 Integrase core domain C4X49_04865 PF00665 Integrase core domain C4X49_04890 PF00872 Transposase, Mutator family C4X49_04935 PF00436 Single-strand binding protein family C4X49_04965 PF00083 Sugar (and other) transporter C4X49_04970 PF00701 Dihydrodipicolinate synthetase family C4X49_04995 PF13520 Amino acid permease C4X49_05000 PF02574 Homocysteine S-methyltransferase C4X49_05010 PF06039 Malate:quinone oxidoreductase (Mqo) C4X49_05015 PF00732 GMC oxidoreductase C4X49_05015 PF05199 GMC oxidoreductase C4X49_05020 PF00171 Aldehyde dehydrogenase family C4X49_05025 PF00440 Bacterial regulatory proteins, tetR family C4X49_05025 PF13977 BetI-type transcriptional repressor, C-terminal C4X49_05030 PF02028 BCCT, betaine/carnitine/choline family transporter C4X49_05035 PF02028 BCCT, betaine/carnitine/choline family transporter C4X49_05045 PF03061 Thioesterase superfamily C4X49_05055 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4X49_05055 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4X49_05060 PF00375 Sodium:dicarboxylate symporter family C4X49_05065 PF07152 YaeQ protein C4X49_05070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4X49_05075 PF01522 Polysaccharide deacetylase C4X49_05075 PF14883 Hypothetical glycosyl hydrolase family 13 C4X49_05080 PF00535 Glycosyl transferase family 2 C4X49_05090 PF00378 Enoyl-CoA hydratase/isomerase C4X49_05105 PF01614 Bacterial transcriptional regulator C4X49_05105 PF09339 IclR helix-turn-helix domain C4X49_05110 PF00355 Rieske [2Fe-2S] domain C4X49_05120 PF00355 Rieske [2Fe-2S] domain C4X49_05130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4X49_05135 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_05135 PF14759 Reductase C-terminal C4X49_05140 PF07690 Major Facilitator Superfamily C4X49_05150 PF12697 Alpha/beta hydrolase family C4X49_05160 PF03447 Homoserine dehydrogenase, NAD binding domain C4X49_05160 PF01958 Domain of unknown function DUF108 C4X49_05165 PF00171 Aldehyde dehydrogenase family C4X49_05170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4X49_05170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4X49_05170 PF00205 Thiamine pyrophosphate enzyme, central domain C4X49_05180 PF07690 Major Facilitator Superfamily C4X49_05185 PF01327 Polypeptide deformylase C4X49_05190 PF04960 Glutaminase C4X49_05195 PF02311 AraC-like ligand binding domain C4X49_05195 PF12833 Helix-turn-helix domain C4X49_05200 PF07690 Major Facilitator Superfamily C4X49_05205 PF01263 Aldose 1-epimerase C4X49_05220 PF03466 LysR substrate binding domain C4X49_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_05230 PF07690 Major Facilitator Superfamily C4X49_05235 PF00456 Transketolase, thiamine diphosphate binding domain C4X49_05240 PF02780 Transketolase, C-terminal domain C4X49_05240 PF02779 Transketolase, pyrimidine binding domain C4X49_05245 PF02574 Homocysteine S-methyltransferase C4X49_05245 PF00809 Pterin binding enzyme C4X49_05245 PF02965 Vitamin B12 dependent methionine synthase, activation domain C4X49_05245 PF02607 B12 binding domain C4X49_05245 PF02310 B12 binding domain C4X49_05250 PF01384 Phosphate transporter family C4X49_05255 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_05270 PF03781 Sulfatase-modifying factor enzyme 1 C4X49_05275 PF00884 Sulfatase C4X49_05285 PF01521 Iron-sulphur cluster biosynthesis C4X49_05285 PF01106 NifU-like domain C4X49_05290 PF07715 TonB-dependent Receptor Plug Domain C4X49_05290 PF00593 TonB dependent receptor C4X49_05300 PF00561 alpha/beta hydrolase fold C4X49_05305 PF00484 Carbonic anhydrase C4X49_05310 PF13472 GDSL-like Lipase/Acylhydrolase family C4X49_05315 PF00005 ABC transporter C4X49_05325 PF01694 Rhomboid family C4X49_05330 PF00912 Transglycosylase C4X49_05335 PF02503 Polyphosphate kinase middle domain C4X49_05335 PF13089 Polyphosphate kinase N-terminal domain C4X49_05335 PF17941 Polyphosphate kinase C-terminal domain 1 C4X49_05335 PF13090 Polyphosphate kinase C-terminal domain 2 C4X49_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_05350 PF03466 LysR substrate binding domain C4X49_05355 PF00561 alpha/beta hydrolase fold C4X49_05360 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_05360 PF18113 Rubredoxin binding C-terminal domain C4X49_05365 PF00301 Rubredoxin C4X49_05380 PF00152 tRNA synthetases class II (D, K and N) C4X49_05380 PF01336 OB-fold nucleic acid binding domain C4X49_05385 PF14052 Capsule assembly protein Wzi C4X49_05395 PF01507 Phosphoadenosine phosphosulfate reductase family C4X49_05400 PF00009 Elongation factor Tu GTP binding domain C4X49_05415 PF03600 Citrate transporter C4X49_05425 PF01595 Cyclin M transmembrane N-terminal domain C4X49_05425 PF03471 Transporter associated domain C4X49_05425 PF00571 CBS domain C4X49_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_05430 PF03466 LysR substrate binding domain C4X49_05435 PF00463 Isocitrate lyase family C4X49_05450 PF01774 UreD urease accessory protein C4X49_05455 PF00547 Urease, gamma subunit C4X49_05460 PF00699 Urease beta subunit C4X49_05470 PF00449 Urease alpha-subunit, N-terminal domain C4X49_05470 PF01979 Amidohydrolase family C4X49_05475 PF05194 UreE urease accessory protein, C-terminal domain C4X49_05475 PF02814 UreE urease accessory protein, N-terminal domain C4X49_05480 PF01730 UreF C4X49_05485 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4X49_05500 PF03717 Penicillin-binding Protein dimerisation domain C4X49_05500 PF00905 Penicillin binding protein transpeptidase domain C4X49_05515 PF05191 Adenylate kinase, active site lid C4X49_05525 PF00633 Helix-hairpin-helix motif C4X49_05525 PF00730 HhH-GPD superfamily base excision DNA repair protein C4X49_05525 PF10576 Iron-sulfur binding domain of endonuclease III C4X49_05530 PF04060 Putative Fe-S cluster C4X49_05535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4X49_05535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4X49_05545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C4X49_05550 PF02590 Predicted SPOUT methyltransferase C4X49_05555 PF05362 Lon protease (S16) C-terminal proteolytic domain C4X49_05555 PF02190 ATP-dependent protease La (LON) substrate-binding domain C4X49_05555 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_05565 PF00872 Transposase, Mutator family C4X49_05580 PF01812 5-formyltetrahydrofolate cyclo-ligase family C4X49_05620 PF00557 Metallopeptidase family M24 C4X49_05620 PF05195 Aminopeptidase P, N-terminal domain C4X49_05625 PF01494 FAD binding domain C4X49_05630 PF01494 FAD binding domain C4X49_05640 PF13411 MerR HTH family regulatory protein C4X49_05650 PF01810 LysE type translocator C4X49_05655 PF03466 LysR substrate binding domain C4X49_05655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_05665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4X49_05670 PF02021 Uncharacterised protein family UPF0102 C4X49_05675 PF04972 BON domain C4X49_05685 PF00293 NUDIX domain C4X49_05685 PF09297 NADH pyrophosphatase zinc ribbon domain C4X49_05695 PF00929 Exonuclease C4X49_05700 PF01464 Transglycosylase SLT domain C4X49_05700 PF01476 LysM domain C4X49_05700 PF01464 Transglycosylase SLT domain C4X49_05700 PF01476 LysM domain C4X49_05705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4X49_05710 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_05715 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_05715 PF12911 N-terminal TM domain of oligopeptide transport permease C C4X49_05720 PF00005 ABC transporter C4X49_05720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4X49_05725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_05725 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_05730 PF00593 TonB dependent receptor C4X49_05730 PF07715 TonB-dependent Receptor Plug Domain C4X49_05740 PF00929 Exonuclease C4X49_05745 PF01979 Amidohydrolase family C4X49_05750 PF00990 Diguanylate cyclase, GGDEF domain C4X49_05750 PF00360 Phytochrome region C4X49_05750 PF00563 EAL domain C4X49_05750 PF01590 GAF domain C4X49_05755 PF00764 Arginosuccinate synthase C4X49_05760 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_05760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_05785 PF03180 NLPA lipoprotein C4X49_05805 PF13359 DDE superfamily endonuclease C4X49_05805 PF13613 Helix-turn-helix of DDE superfamily endonuclease C4X49_05835 PF13148 Protein of unknown function (DUF3987) C4X49_05845 PF03783 Curli production assembly/transport component CsgG C4X49_05855 PF05643 Putative bacterial lipoprotein (DUF799) C4X49_05865 PF00324 Amino acid permease C4X49_05885 PF00813 FliP family C4X49_05900 PF00171 Aldehyde dehydrogenase family C4X49_05905 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4X49_05905 PF12833 Helix-turn-helix domain C4X49_05910 PF00892 EamA-like transporter family C4X49_05915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C4X49_05915 PF08666 SAF domain C4X49_05920 PF07690 Major Facilitator Superfamily C4X49_05925 PF13378 Enolase C-terminal domain-like C4X49_05930 PF00701 Dihydrodipicolinate synthetase family C4X49_05935 PF00171 Aldehyde dehydrogenase family C4X49_05940 PF07729 FCD domain C4X49_05940 PF00392 Bacterial regulatory proteins, gntR family C4X49_05945 PF07519 Tannase and feruloyl esterase C4X49_05960 PF03573 outer membrane porin, OprD family C4X49_05965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_05965 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_05965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_05975 PF00171 Aldehyde dehydrogenase family C4X49_05980 PF00378 Enoyl-CoA hydratase/isomerase C4X49_05985 PF07690 Major Facilitator Superfamily C4X49_06000 PF00175 Oxidoreductase NAD-binding domain C4X49_06000 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_06005 PF00355 Rieske [2Fe-2S] domain C4X49_06010 PF07690 Major Facilitator Superfamily C4X49_06015 PF03573 outer membrane porin, OprD family C4X49_06020 PF05199 GMC oxidoreductase C4X49_06025 PF07859 alpha/beta hydrolase fold C4X49_06030 PF00106 short chain dehydrogenase C4X49_06035 PF00743 Flavin-binding monooxygenase-like C4X49_06040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4X49_06040 PF12833 Helix-turn-helix domain C4X49_06045 PF05683 Fumarase C-terminus C4X49_06050 PF05681 Fumarate hydratase (Fumerase) C4X49_06055 PF07690 Major Facilitator Superfamily C4X49_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_06060 PF03466 LysR substrate binding domain C4X49_06065 PF04072 Leucine carboxyl methyltransferase C4X49_06070 PF00743 Flavin-binding monooxygenase-like C4X49_06075 PF00106 short chain dehydrogenase C4X49_06085 PF17932 Tetracyclin repressor-like, C-terminal domain C4X49_06085 PF00440 Bacterial regulatory proteins, tetR family C4X49_06090 PF17954 Quercetinase C-terminal cupin domain C4X49_06090 PF02678 Pirin C4X49_06100 PF00106 short chain dehydrogenase C4X49_06105 PF00743 Flavin-binding monooxygenase-like C4X49_06115 PF00860 Permease family C4X49_06120 PF00962 Adenosine/AMP deaminase C4X49_06135 PF01292 Prokaryotic cytochrome b561 C4X49_06145 PF01351 Ribonuclease HII C4X49_06150 PF02599 Global regulator protein family C4X49_06155 PF00696 Amino acid kinase family C4X49_06155 PF01842 ACT domain C4X49_06155 PF13840 ACT domain C4X49_06180 PF01381 Helix-turn-helix C4X49_06255 PF00182 Chitinase class I C4X49_06280 PF13737 Transposase DDE domain C4X49_06300 PF00872 Transposase, Mutator family C4X49_06305 PF00589 Phage integrase family C4X49_06305 PF13356 Arm DNA-binding domain C4X49_06310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4X49_06310 PF01411 tRNA synthetases class II (A) C4X49_06310 PF02272 DHHA1 domain C4X49_06315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4X49_06315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4X49_06320 PF13393 Histidyl-tRNA synthetase C4X49_06325 PF00709 Adenylosuccinate synthetase C4X49_06340 PF00248 Aldo/keto reductase family C4X49_06345 PF13545 Crp-like helix-turn-helix domain C4X49_06345 PF00027 Cyclic nucleotide-binding domain C4X49_06350 PF02566 OsmC-like protein C4X49_06365 PF07724 AAA domain (Cdc48 subfamily) C4X49_06365 PF10431 C-terminal, D2-small domain, of ClpB protein C4X49_06365 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_06365 PF02861 Clp amino terminal domain, pathogenicity island component C4X49_06365 PF17871 AAA lid domain C4X49_06380 PF01170 Putative RNA methylase family UPF0020 C4X49_06380 PF02926 THUMP domain C4X49_06380 PF10672 S-adenosylmethionine-dependent methyltransferase C4X49_06390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4X49_06390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4X49_06395 PF01979 Amidohydrolase family C4X49_06400 PF13488 Glycine zipper C4X49_06400 PF00691 OmpA family C4X49_06410 PF13417 Glutathione S-transferase, N-terminal domain C4X49_06410 PF00043 Glutathione S-transferase, C-terminal domain C4X49_06425 PF13737 Transposase DDE domain C4X49_06435 PF02390 Putative methyltransferase C4X49_06445 PF02798 Glutathione S-transferase, N-terminal domain C4X49_06445 PF00043 Glutathione S-transferase, C-terminal domain C4X49_06455 PF13192 Thioredoxin domain C4X49_06455 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_06475 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4X49_06475 PF00578 AhpC/TSA family C4X49_06480 PF04408 Helicase associated domain (HA2) C4X49_06480 PF00270 DEAD/DEAH box helicase C4X49_06480 PF00271 Helicase conserved C-terminal domain C4X49_06480 PF11898 Domain of unknown function (DUF3418) C4X49_06480 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C4X49_06485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4X49_06485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4X49_06495 PF07690 Major Facilitator Superfamily C4X49_06500 PF03594 Benzoate membrane transport protein C4X49_06505 PF00106 short chain dehydrogenase C4X49_06510 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_06510 PF00970 Oxidoreductase FAD-binding domain C4X49_06510 PF00175 Oxidoreductase NAD-binding domain C4X49_06515 PF00866 Ring hydroxylating beta subunit C4X49_06520 PF00355 Rieske [2Fe-2S] domain C4X49_06520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4X49_06525 PF03466 LysR substrate binding domain C4X49_06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_06530 PF00403 Heavy-metal-associated domain C4X49_06535 PF00403 Heavy-metal-associated domain C4X49_06540 PF09278 MerR, DNA binding C4X49_06540 PF00376 MerR family regulatory protein C4X49_06580 PF13742 OB-fold nucleic acid binding domain C4X49_06580 PF02601 Exonuclease VII, large subunit C4X49_06615 PF01810 LysE type translocator C4X49_06620 PF00313 'Cold-shock' DNA-binding domain C4X49_06630 PF03807 NADP oxidoreductase coenzyme F420-dependent C4X49_06630 PF14748 Pyrroline-5-carboxylate reductase dimerisation C4X49_06655 PF09190 DALR domain C4X49_06655 PF01406 tRNA synthetases class I (C) catalytic domain C4X49_06660 PF00571 CBS domain C4X49_06660 PF01380 SIS domain C4X49_06675 PF03968 OstA-like protein C4X49_06680 PF00005 ABC transporter C4X49_06680 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4X49_06705 PF02321 Outer membrane efflux protein C4X49_06710 PF03412 Peptidase C39 family C4X49_06710 PF00664 ABC transporter transmembrane region C4X49_06710 PF00005 ABC transporter C4X49_06720 PF01205 Uncharacterized protein family UPF0029 C4X49_06725 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_06735 PF01596 O-methyltransferase C4X49_06745 PF11953 Domain of unknown function (DUF3470) C4X49_06745 PF00037 4Fe-4S binding domain C4X49_06755 PF05188 MutS domain II C4X49_06755 PF05192 MutS domain III C4X49_06755 PF05190 MutS family domain IV C4X49_06755 PF00488 MutS domain V C4X49_06755 PF01624 MutS domain I C4X49_06760 PF01037 Lrp/AsnC ligand binding domain C4X49_06780 PF00563 EAL domain C4X49_06780 PF00990 Diguanylate cyclase, GGDEF domain C4X49_06780 PF03707 Bacterial signalling protein N terminal repeat C4X49_06785 PF03279 Bacterial lipid A biosynthesis acyltransferase C4X49_06795 PF07690 Major Facilitator Superfamily C4X49_06800 PF01177 Asp/Glu/Hydantoin racemase C4X49_06805 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_06810 PF00005 ABC transporter C4X49_06815 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_06820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4X49_06840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4X49_06840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4X49_06860 PF13419 Haloacid dehalogenase-like hydrolase C4X49_06865 PF13737 Transposase DDE domain C4X49_06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_06880 PF03466 LysR substrate binding domain C4X49_06885 PF01566 Natural resistance-associated macrophage protein C4X49_06890 PF03746 LamB/YcsF family C4X49_06895 PF07286 Protein of unknown function (DUF1445) C4X49_06905 PF00364 Biotin-requiring enzyme C4X49_06905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4X49_06905 PF00289 Biotin carboxylase, N-terminal domain C4X49_06905 PF02785 Biotin carboxylase C-terminal domain C4X49_06910 PF00654 Voltage gated chloride channel C4X49_06915 PF00226 DnaJ domain C4X49_06915 PF01556 DnaJ C terminal domain C4X49_06915 PF00684 DnaJ central domain C4X49_06935 PF00107 Zinc-binding dehydrogenase C4X49_06935 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_06935 PF13823 Alcohol dehydrogenase GroES-associated C4X49_06950 PF02677 Epoxyqueuosine reductase QueH C4X49_06955 PF13737 Transposase DDE domain C4X49_06960 PF13737 Transposase DDE domain C4X49_06970 PF09278 MerR, DNA binding C4X49_06970 PF00376 MerR family regulatory protein C4X49_06985 PF00701 Dihydrodipicolinate synthetase family C4X49_06995 PF00392 Bacterial regulatory proteins, gntR family C4X49_07000 PF05544 Proline racemase C4X49_07005 PF01266 FAD dependent oxidoreductase C4X49_07015 PF04324 BFD-like [2Fe-2S] binding domain C4X49_07015 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_07025 PF00083 Sugar (and other) transporter C4X49_07030 PF00171 Aldehyde dehydrogenase family C4X49_07035 PF13520 Amino acid permease C4X49_07045 PF01575 MaoC like domain C4X49_07045 PF00171 Aldehyde dehydrogenase family C4X49_07050 PF05138 Phenylacetic acid catabolic protein C4X49_07055 PF06243 Phenylacetic acid degradation B C4X49_07060 PF05138 Phenylacetic acid catabolic protein C4X49_07065 PF01883 Iron-sulfur cluster assembly protein C4X49_07070 PF00970 Oxidoreductase FAD-binding domain C4X49_07070 PF00175 Oxidoreductase NAD-binding domain C4X49_07070 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_07075 PF00378 Enoyl-CoA hydratase/isomerase C4X49_07080 PF00378 Enoyl-CoA hydratase/isomerase C4X49_07085 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain C4X49_07085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4X49_07085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4X49_07090 PF02803 Thiolase, C-terminal domain C4X49_07090 PF00108 Thiolase, N-terminal domain C4X49_07095 PF14535 AMP-binding enzyme C-terminal domain C4X49_07095 PF00501 AMP-binding enzyme C4X49_07100 PF08223 PaaX-like protein C-terminal domain C4X49_07100 PF07848 PaaX-like protein C4X49_07105 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_07110 PF03061 Thioesterase superfamily C4X49_07120 PF00300 Histidine phosphatase superfamily (branch 1) C4X49_07145 PF00440 Bacterial regulatory proteins, tetR family C4X49_07145 PF16295 Tetracyclin repressor-like, C-terminal domain C4X49_07150 PF00202 Aminotransferase class-III C4X49_07155 PF12833 Helix-turn-helix domain C4X49_07155 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4X49_07165 PF01636 Phosphotransferase enzyme family C4X49_07170 PF13520 Amino acid permease C4X49_07180 PF00199 Catalase C4X49_07185 PF01292 Prokaryotic cytochrome b561 C4X49_07205 PF12697 Alpha/beta hydrolase family C4X49_07210 PF01613 Flavin reductase like domain C4X49_07215 PF00296 Luciferase-like monooxygenase C4X49_07220 PF00171 Aldehyde dehydrogenase family C4X49_07230 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4X49_07240 PF00171 Aldehyde dehydrogenase family C4X49_07255 PF02627 Carboxymuconolactone decarboxylase family C4X49_07260 PF03466 LysR substrate binding domain C4X49_07260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07265 PF02525 Flavodoxin-like fold C4X49_07270 PF01614 Bacterial transcriptional regulator C4X49_07270 PF09339 IclR helix-turn-helix domain C4X49_07275 PF01494 FAD binding domain C4X49_07280 PF07702 UTRA domain C4X49_07280 PF00392 Bacterial regulatory proteins, gntR family C4X49_07290 PF08402 TOBE domain C4X49_07290 PF00005 ABC transporter C4X49_07295 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_07300 PF01266 FAD dependent oxidoreductase C4X49_07305 PF00266 Aminotransferase class-V C4X49_07310 PF13419 Haloacid dehalogenase-like hydrolase C4X49_07315 PF07690 Major Facilitator Superfamily C4X49_07320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_07320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_07320 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_07325 PF02515 CoA-transferase family III C4X49_07330 PF09339 IclR helix-turn-helix domain C4X49_07335 PF00378 Enoyl-CoA hydratase/isomerase C4X49_07340 PF03060 Nitronate monooxygenase C4X49_07350 PF07690 Major Facilitator Superfamily C4X49_07355 PF09339 IclR helix-turn-helix domain C4X49_07360 PF00108 Thiolase, N-terminal domain C4X49_07360 PF02803 Thiolase, C-terminal domain C4X49_07365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4X49_07365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4X49_07365 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain C4X49_07375 PF00378 Enoyl-CoA hydratase/isomerase C4X49_07380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_07380 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_07380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_07385 PF07690 Major Facilitator Superfamily C4X49_07390 PF01144 Coenzyme A transferase C4X49_07395 PF01144 Coenzyme A transferase C4X49_07405 PF07690 Major Facilitator Superfamily C4X49_07415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_07415 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_07415 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4X49_07415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_07430 PF03466 LysR substrate binding domain C4X49_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07435 PF00682 HMGL-like C4X49_07440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4X49_07440 PF00364 Biotin-requiring enzyme C4X49_07440 PF00289 Biotin carboxylase, N-terminal domain C4X49_07440 PF02785 Biotin carboxylase C-terminal domain C4X49_07445 PF00378 Enoyl-CoA hydratase/isomerase C4X49_07450 PF01039 Carboxyl transferase domain C4X49_07455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_07455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_07455 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_07460 PF00440 Bacterial regulatory proteins, tetR family C4X49_07465 PF13193 AMP-binding enzyme C-terminal domain C4X49_07465 PF00501 AMP-binding enzyme C4X49_07485 PF03466 LysR substrate binding domain C4X49_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07515 PF02464 Competence-damaged protein C4X49_07515 PF18146 Damage-inducible protein CinA KH domain C4X49_07515 PF00994 Probable molybdopterin binding domain C4X49_07525 PF00199 Catalase C4X49_07525 PF06628 Catalase-related immune-responsive C4X49_07525 PF18011 C-terminal domain found in long catalases C4X49_07550 PF00717 Peptidase S24-like C4X49_07560 PF01037 Lrp/AsnC ligand binding domain C4X49_07560 PF13404 AsnC-type helix-turn-helix domain C4X49_07570 PF00072 Response regulator receiver domain C4X49_07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_07570 PF00512 His Kinase A (phospho-acceptor) domain C4X49_07570 PF09308 LuxQ, periplasmic C4X49_07575 PF00072 Response regulator receiver domain C4X49_07580 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C4X49_07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07590 PF03466 LysR substrate binding domain C4X49_07595 PF07690 Major Facilitator Superfamily C4X49_07615 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_07620 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_07625 PF00005 ABC transporter C4X49_07630 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4X49_07635 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4X49_07645 PF03466 LysR substrate binding domain C4X49_07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07650 PF01810 LysE type translocator C4X49_07655 PF00266 Aminotransferase class-V C4X49_07665 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_07670 PF00581 Rhodanese-like domain C4X49_07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07680 PF03466 LysR substrate binding domain C4X49_07685 PF02798 Glutathione S-transferase, N-terminal domain C4X49_07690 PF02798 Glutathione S-transferase, N-terminal domain C4X49_07690 PF14834 Glutathione S-transferase, C-terminal domain C4X49_07695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07695 PF03466 LysR substrate binding domain C4X49_07700 PF03788 LrgA family C4X49_07705 PF04172 LrgB-like family C4X49_07710 PF00155 Aminotransferase class I and II C4X49_07710 PF00392 Bacterial regulatory proteins, gntR family C4X49_07730 PF00106 short chain dehydrogenase C4X49_07735 PF07690 Major Facilitator Superfamily C4X49_07740 PF16957 Malonate decarboxylase, alpha subunit, transporter C4X49_07745 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C4X49_07750 PF06857 Malonate decarboxylase delta subunit (MdcD) C4X49_07755 PF01039 Carboxyl transferase domain C4X49_07765 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C4X49_07770 PF00698 Acyl transferase domain C4X49_07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07785 PF03466 LysR substrate binding domain C4X49_07790 PF00155 Aminotransferase class I and II C4X49_07790 PF00392 Bacterial regulatory proteins, gntR family C4X49_07800 PF02322 Cytochrome bd terminal oxidase subunit II C4X49_07805 PF01654 Cytochrome bd terminal oxidase subunit I C4X49_07820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_07820 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4X49_07820 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_07830 PF00296 Luciferase-like monooxygenase C4X49_07835 PF00083 Sugar (and other) transporter C4X49_07845 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4X49_07850 PF00005 ABC transporter C4X49_07855 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_07860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C4X49_07865 PF01177 Asp/Glu/Hydantoin racemase C4X49_07870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4X49_07880 PF03466 LysR substrate binding domain C4X49_07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07890 PF01979 Amidohydrolase family C4X49_07890 PF13382 Adenine deaminase C-terminal domain C4X49_07900 PF03960 ArsC family C4X49_07905 PF01022 Bacterial regulatory protein, arsR family C4X49_07910 PF01758 Sodium Bile acid symporter family C4X49_07915 PF03466 LysR substrate binding domain C4X49_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_07930 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_07930 PF13192 Thioredoxin domain C4X49_07945 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_07950 PF00588 SpoU rRNA Methylase family C4X49_07955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C4X49_07955 PF07733 Bacterial DNA polymerase III alpha NTPase domain C4X49_07955 PF14579 Helix-hairpin-helix motif C4X49_07955 PF01336 OB-fold nucleic acid binding domain C4X49_07955 PF02811 PHP domain C4X49_07960 PF00710 Asparaginase, N-terminal C4X49_07960 PF17763 Glutaminase/Asparaginase C-terminal domain C4X49_07965 PF00375 Sodium:dicarboxylate symporter family C4X49_07970 PF00155 Aminotransferase class I and II C4X49_07975 PF01641 SelR domain C4X49_07980 PF00255 Glutathione peroxidase C4X49_07985 PF12833 Helix-turn-helix domain C4X49_07985 PF12852 Cupin C4X49_07995 PF00155 Aminotransferase class I and II C4X49_08000 PF01909 Nucleotidyltransferase domain C4X49_08000 PF01966 HD domain C4X49_08000 PF08335 GlnD PII-uridylyltransferase C4X49_08005 PF02222 ATP-grasp domain C4X49_08015 PF05437 Branched-chain amino acid transport protein (AzlD) C4X49_08020 PF03591 AzlC protein C4X49_08045 PF01926 50S ribosome-binding GTPase C4X49_08045 PF06071 Protein of unknown function (DUF933) C4X49_08050 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_08055 PF09383 NIL domain C4X49_08055 PF00005 ABC transporter C4X49_08060 PF03180 NLPA lipoprotein C4X49_08065 PF03180 NLPA lipoprotein C4X49_08070 PF00296 Luciferase-like monooxygenase C4X49_08080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_08080 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4X49_08095 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_08100 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_08105 PF00005 ABC transporter C4X49_08115 PF01037 Lrp/AsnC ligand binding domain C4X49_08120 PF01709 Transcriptional regulator C4X49_08185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4X49_08185 PF02753 Pili assembly chaperone PapD, C-terminal domain C4X49_08190 PF16970 Type-1 fimbrial protein, A C4X49_08205 PF06968 Biotin and Thiamin Synthesis associated domain C4X49_08205 PF04055 Radical SAM superfamily C4X49_08210 PF08331 Domain of unknown function (DUF1730) C4X49_08215 PF01256 Carbohydrate kinase C4X49_08215 PF03853 YjeF-related protein N-terminus C4X49_08220 PF02075 Crossover junction endodeoxyribonuclease RuvC C4X49_08235 PF00905 Penicillin binding protein transpeptidase domain C4X49_08255 PF00438 S-adenosylmethionine synthetase, N-terminal domain C4X49_08255 PF02772 S-adenosylmethionine synthetase, central domain C4X49_08255 PF02773 S-adenosylmethionine synthetase, C-terminal domain C4X49_08260 PF02779 Transketolase, pyrimidine binding domain C4X49_08260 PF02780 Transketolase, C-terminal domain C4X49_08260 PF00456 Transketolase, thiamine diphosphate binding domain C4X49_08270 PF04264 YceI-like domain C4X49_08280 PF09992 Phosphodiester glycosidase C4X49_08290 PF05958 tRNA (Uracil-5-)-methyltransferase C4X49_08295 PF04229 GrpB protein C4X49_08300 PF00171 Aldehyde dehydrogenase family C4X49_08300 PF01619 Proline dehydrogenase C4X49_08300 PF14850 DNA-binding domain of Proline dehydrogenase C4X49_08300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C4X49_08305 PF01037 Lrp/AsnC ligand binding domain C4X49_08310 PF00474 Sodium:solute symporter family C4X49_08315 PF02146 Sir2 family C4X49_08320 PF01597 Glycine cleavage H-protein C4X49_08325 PF12833 Helix-turn-helix domain C4X49_08325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C4X49_08335 PF00005 ABC transporter C4X49_08335 PF00664 ABC transporter transmembrane region C4X49_08340 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C4X49_08345 PF06912 Protein of unknown function (DUF1275) C4X49_08350 PF00375 Sodium:dicarboxylate symporter family C4X49_08365 PF08007 Cupin superfamily protein C4X49_08370 PF02545 Maf-like protein C4X49_08380 PF00162 Phosphoglycerate kinase C4X49_08390 PF01116 Fructose-bisphosphate aldolase class-II C4X49_08395 PF00639 PPIC-type PPIASE domain C4X49_08395 PF09312 SurA N-terminal domain C4X49_08400 PF04453 LPS transport system D C4X49_08400 PF03968 OstA-like protein C4X49_08405 PF01636 Phosphotransferase enzyme family C4X49_08410 PF00483 Nucleotidyl transferase C4X49_08415 PF02527 rRNA small subunit methyltransferase G C4X49_08420 PF13614 AAA domain C4X49_08425 PF17762 HTH domain found in ParB protein C4X49_08425 PF02195 ParB-like nuclease domain C4X49_08430 PF01618 MotA/TolQ/ExbB proton channel family C4X49_08440 PF00664 ABC transporter transmembrane region C4X49_08440 PF00005 ABC transporter C4X49_08445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C4X49_08450 PF02348 Cytidylyltransferase C4X49_08455 PF09115 DNA polymerase III, delta subunit, C terminal C4X49_08465 PF01026 TatD related DNase C4X49_08480 PF07963 Prokaryotic N-terminal methylation motif C4X49_08480 PF02501 Type II secretion system (T2SS), protein I C4X49_08485 PF11612 Type II secretion system (T2SS), protein J C4X49_08485 PF07963 Prokaryotic N-terminal methylation motif C4X49_08490 PF03934 Type II secretion system (T2SS), protein K C4X49_08500 PF03167 Uracil DNA glycosylase superfamily C4X49_08510 PF14437 MafB19-like deaminase C4X49_08520 PF02224 Cytidylate kinase C4X49_08525 PF00575 S1 RNA binding domain C4X49_08530 PF00216 Bacterial DNA-binding protein C4X49_08560 PF00743 Flavin-binding monooxygenase-like C4X49_08570 PF03969 AFG1-like ATPase C4X49_08585 PF07715 TonB-dependent Receptor Plug Domain C4X49_08585 PF00593 TonB dependent receptor C4X49_08605 PF01432 Peptidase family M3 C4X49_08610 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_08615 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_08620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4X49_08620 PF00005 ABC transporter C4X49_08635 PF00459 Inositol monophosphatase family C4X49_08645 PF01649 Ribosomal protein S20 C4X49_08650 PF13460 NAD(P)H-binding C4X49_08655 PF03737 Aldolase/RraA C4X49_08675 PF02559 CarD-like/TRCF domain C4X49_08675 PF03461 TRCF domain C4X49_08675 PF17757 UvrB interaction domain C4X49_08675 PF00270 DEAD/DEAH box helicase C4X49_08675 PF00271 Helicase conserved C-terminal domain C4X49_08685 PF00211 Adenylate and Guanylate cyclase catalytic domain C4X49_08690 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_08695 PF00012 Hsp70 protein C4X49_08700 PF07743 HSCB C-terminal oligomerisation domain C4X49_08700 PF00226 DnaJ domain C4X49_08705 PF01521 Iron-sulphur cluster biosynthesis C4X49_08710 PF01592 NifU-like N terminal domain C4X49_08715 PF00266 Aminotransferase class-V C4X49_08720 PF02082 Transcriptional regulator C4X49_08735 PF00216 Bacterial DNA-binding protein C4X49_08740 PF00639 PPIC-type PPIASE domain C4X49_08740 PF09312 SurA N-terminal domain C4X49_08745 PF12833 Helix-turn-helix domain C4X49_08745 PF12852 Cupin C4X49_08750 PF00487 Fatty acid desaturase C4X49_08755 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_08760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_08760 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_08760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_08765 PF03109 ABC1 family C4X49_08775 PF04073 Aminoacyl-tRNA editing domain C4X49_08780 PF06276 Ferric iron reductase FhuF-like transporter C4X49_08780 PF04183 IucA / IucC family C4X49_08785 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C4X49_08790 PF07690 Major Facilitator Superfamily C4X49_08795 PF04183 IucA / IucC family C4X49_08795 PF06276 Ferric iron reductase FhuF-like transporter C4X49_08800 PF04183 IucA / IucC family C4X49_08800 PF06276 Ferric iron reductase FhuF-like transporter C4X49_08810 PF03737 Aldolase/RraA C4X49_08815 PF00593 TonB dependent receptor C4X49_08815 PF07715 TonB-dependent Receptor Plug Domain C4X49_08840 PF13419 Haloacid dehalogenase-like hydrolase C4X49_08850 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C4X49_08855 PF02277 Phosphoribosyltransferase C4X49_08860 PF00300 Histidine phosphatase superfamily (branch 1) C4X49_08870 PF02654 Cobalamin-5-phosphate synthase C4X49_08875 PF00793 DAHP synthetase I family C4X49_08880 PF01925 Sulfite exporter TauE/SafE C4X49_08905 PF07715 TonB-dependent Receptor Plug Domain C4X49_08905 PF00593 TonB dependent receptor C4X49_08910 PF02684 Lipid-A-disaccharide synthetase C4X49_08920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4X49_08925 PF00005 ABC transporter C4X49_08960 PF01230 HIT domain C4X49_08990 PF08241 Methyltransferase domain C4X49_08995 PF00561 alpha/beta hydrolase fold C4X49_09000 PF13737 Transposase DDE domain C4X49_09005 PF01053 Cys/Met metabolism PLP-dependent enzyme C4X49_09015 PF02575 YbaB/EbfC DNA-binding family C4X49_09020 PF02132 RecR protein C4X49_09020 PF13662 Toprim domain C4X49_09045 PF05166 YcgL domain C4X49_09055 PF01434 Peptidase family M41 C4X49_09055 PF17862 AAA+ lid domain C4X49_09055 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_09065 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_09070 PF05175 Methyltransferase small domain C4X49_09075 PF01264 Chorismate synthase C4X49_09080 PF00990 Diguanylate cyclase, GGDEF domain C4X49_09080 PF08448 PAS fold C4X49_09095 PF04055 Radical SAM superfamily C4X49_09105 PF00676 Dehydrogenase E1 component C4X49_09110 PF02780 Transketolase, C-terminal domain C4X49_09110 PF02779 Transketolase, pyrimidine binding domain C4X49_09115 PF00364 Biotin-requiring enzyme C4X49_09115 PF02817 e3 binding domain C4X49_09115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4X49_09120 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_09120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4X49_09125 PF00106 short chain dehydrogenase C4X49_09130 PF00107 Zinc-binding dehydrogenase C4X49_09130 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_09135 PF01062 Bestrophin, RFP-TM, chloride channel C4X49_09140 PF00158 Sigma-54 interaction domain C4X49_09140 PF02954 Bacterial regulatory protein, Fis family C4X49_09140 PF00072 Response regulator receiver domain C4X49_09145 PF00753 Metallo-beta-lactamase superfamily C4X49_09145 PF04273 Putative phosphatase (DUF442) C4X49_09150 PF04273 Putative phosphatase (DUF442) C4X49_09150 PF00753 Metallo-beta-lactamase superfamily C4X49_09155 PF01925 Sulfite exporter TauE/SafE C4X49_09170 PF06445 GyrI-like small molecule binding domain C4X49_09170 PF12833 Helix-turn-helix domain C4X49_09175 PF01638 HxlR-like helix-turn-helix C4X49_09180 PF02525 Flavodoxin-like fold C4X49_09205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C4X49_09220 PF00083 Sugar (and other) transporter C4X49_09225 PF07715 TonB-dependent Receptor Plug Domain C4X49_09225 PF00593 TonB dependent receptor C4X49_09230 PF00206 Lyase C4X49_09230 PF10415 Fumarase C C-terminus C4X49_09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09245 PF03466 LysR substrate binding domain C4X49_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09250 PF03466 LysR substrate binding domain C4X49_09255 PF02803 Thiolase, C-terminal domain C4X49_09255 PF00108 Thiolase, N-terminal domain C4X49_09260 PF02667 Short chain fatty acid transporter C4X49_09265 PF01144 Coenzyme A transferase C4X49_09270 PF01144 Coenzyme A transferase C4X49_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09275 PF03466 LysR substrate binding domain C4X49_09295 PF00440 Bacterial regulatory proteins, tetR family C4X49_09315 PF06719 AraC-type transcriptional regulator N-terminus C4X49_09315 PF12833 Helix-turn-helix domain C4X49_09320 PF07690 Major Facilitator Superfamily C4X49_09325 PF01738 Dienelactone hydrolase family C4X49_09340 PF01613 Flavin reductase like domain C4X49_09350 PF12833 Helix-turn-helix domain C4X49_09350 PF14525 AraC-binding-like domain C4X49_09355 PF00175 Oxidoreductase NAD-binding domain C4X49_09355 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_09355 PF00970 Oxidoreductase FAD-binding domain C4X49_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09370 PF03459 TOBE domain C4X49_09380 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_09385 PF03459 TOBE domain C4X49_09385 PF00005 ABC transporter C4X49_09390 PF00106 short chain dehydrogenase C4X49_09395 PF00857 Isochorismatase family C4X49_09395 PF00550 Phosphopantetheine attachment site C4X49_09405 PF00149 Calcineurin-like phosphoesterase C4X49_09410 PF13089 Polyphosphate kinase N-terminal domain C4X49_09410 PF17941 Polyphosphate kinase C-terminal domain 1 C4X49_09410 PF13090 Polyphosphate kinase C-terminal domain 2 C4X49_09410 PF02503 Polyphosphate kinase middle domain C4X49_09415 PF08042 PqqA family C4X49_09420 PF12706 Beta-lactamase superfamily domain C4X49_09425 PF03070 TENA/THI-4/PQQC family C4X49_09430 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C4X49_09435 PF13186 Iron-sulfur cluster-binding domain C4X49_09435 PF04055 Radical SAM superfamily C4X49_09440 PF01244 Membrane dipeptidase (Peptidase family M19) C4X49_09465 PF13091 PLD-like domain C4X49_09480 PF00199 Catalase C4X49_09490 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_09490 PF00107 Zinc-binding dehydrogenase C4X49_09505 PF13953 PapC C-terminal domain C4X49_09505 PF13954 PapC N-terminal domain C4X49_09505 PF00577 Outer membrane usher protein C4X49_09510 PF02753 Pili assembly chaperone PapD, C-terminal domain C4X49_09510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C4X49_09515 PF16970 Type-1 fimbrial protein, A C4X49_09540 PF13737 Transposase DDE domain C4X49_09570 PF13193 AMP-binding enzyme C-terminal domain C4X49_09570 PF00501 AMP-binding enzyme C4X49_09580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_09580 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_09580 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4X49_09580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_09585 PF01575 MaoC like domain C4X49_09590 PF00106 short chain dehydrogenase C4X49_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09605 PF03466 LysR substrate binding domain C4X49_09610 PF08359 YsiA-like protein, C-terminal region C4X49_09610 PF00440 Bacterial regulatory proteins, tetR family C4X49_09615 PF12706 Beta-lactamase superfamily domain C4X49_09640 PF01636 Phosphotransferase enzyme family C4X49_09645 PF00171 Aldehyde dehydrogenase family C4X49_09655 PF07690 Major Facilitator Superfamily C4X49_09660 PF00920 Dehydratase family C4X49_09665 PF07729 FCD domain C4X49_09665 PF00392 Bacterial regulatory proteins, gntR family C4X49_09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09675 PF03466 LysR substrate binding domain C4X49_09680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4X49_09680 PF13378 Enolase C-terminal domain-like C4X49_09685 PF02426 Muconolactone delta-isomerase C4X49_09690 PF04444 Catechol dioxygenase N terminus C4X49_09690 PF00775 Dioxygenase C4X49_09695 PF01144 Coenzyme A transferase C4X49_09700 PF01144 Coenzyme A transferase C4X49_09705 PF02803 Thiolase, C-terminal domain C4X49_09705 PF00108 Thiolase, N-terminal domain C4X49_09710 PF12146 Serine aminopeptidase, S33 C4X49_09715 PF01804 Penicillin amidase C4X49_09720 PF00171 Aldehyde dehydrogenase family C4X49_09730 PF01179 Copper amine oxidase, enzyme domain C4X49_09730 PF07833 Copper amine oxidase N-terminal domain C4X49_09730 PF02727 Copper amine oxidase, N2 domain C4X49_09730 PF02728 Copper amine oxidase, N3 domain C4X49_09735 PF12833 Helix-turn-helix domain C4X49_09735 PF02311 AraC-like ligand binding domain C4X49_09740 PF01613 Flavin reductase like domain C4X49_09745 PF00175 Oxidoreductase NAD-binding domain C4X49_09745 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_09760 PF00355 Rieske [2Fe-2S] domain C4X49_09760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C4X49_09775 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C4X49_09780 PF01425 Amidase C4X49_09790 PF07690 Major Facilitator Superfamily C4X49_09800 PF00106 short chain dehydrogenase C4X49_09815 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_09815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_09815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_09820 PF03466 LysR substrate binding domain C4X49_09820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_09825 PF01614 Bacterial transcriptional regulator C4X49_09825 PF09339 IclR helix-turn-helix domain C4X49_09830 PF00753 Metallo-beta-lactamase superfamily C4X49_09840 PF04143 Sulphur transport C4X49_09850 PF01011 PQQ enzyme repeat C4X49_09850 PF13360 PQQ-like domain C4X49_09855 PF04966 Carbohydrate-selective porin, OprB family C4X49_09860 PF05048 Periplasmic copper-binding protein (NosD) C4X49_09865 PF01487 Type I 3-dehydroquinase C4X49_09870 PF00775 Dioxygenase C4X49_09875 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C4X49_09875 PF00775 Dioxygenase C4X49_09880 PF02627 Carboxymuconolactone decarboxylase family C4X49_09885 PF07690 Major Facilitator Superfamily C4X49_09890 PF00561 alpha/beta hydrolase fold C4X49_09895 PF10397 Adenylosuccinate lyase C-terminus C4X49_09895 PF00206 Lyase C4X49_09900 PF00108 Thiolase, N-terminal domain C4X49_09900 PF02803 Thiolase, C-terminal domain C4X49_09905 PF01144 Coenzyme A transferase C4X49_09910 PF01144 Coenzyme A transferase C4X49_09915 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C4X49_09920 PF04977 Septum formation initiator C4X49_09925 PF04239 Protein of unknown function (DUF421) C4X49_09930 PF03952 Enolase, N-terminal domain C4X49_09930 PF00113 Enolase, C-terminal TIM barrel domain C4X49_09935 PF00793 DAHP synthetase I family C4X49_09940 PF00117 Glutamine amidotransferase class-I C4X49_09940 PF06418 CTP synthase N-terminus C4X49_09970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_09985 PF00793 DAHP synthetase I family C4X49_09990 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C4X49_09995 PF17871 AAA lid domain C4X49_09995 PF02861 Clp amino terminal domain, pathogenicity island component C4X49_09995 PF10431 C-terminal, D2-small domain, of ClpB protein C4X49_09995 PF07724 AAA domain (Cdc48 subfamily) C4X49_09995 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_10000 PF02617 ATP-dependent Clp protease adaptor protein ClpS C4X49_10010 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4X49_10010 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4X49_10025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C4X49_10030 PF00585 C-terminal regulatory domain of Threonine dehydratase C4X49_10030 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_10035 PF02254 TrkA-N domain C4X49_10035 PF02080 TrkA-C domain C4X49_10040 PF02386 Cation transport protein C4X49_10045 PF02253 Phospholipase A1 C4X49_10050 PF08367 Peptidase M16C associated C4X49_10050 PF00675 Insulinase (Peptidase family M16) C4X49_10050 PF05193 Peptidase M16 inactive domain C4X49_10055 PF07715 TonB-dependent Receptor Plug Domain C4X49_10055 PF00593 TonB dependent receptor C4X49_10060 PF00294 pfkB family carbohydrate kinase C4X49_10070 PF07290 Protein of unknown function (DUF1449) C4X49_10080 PF01654 Cytochrome bd terminal oxidase subunit I C4X49_10085 PF02322 Cytochrome bd terminal oxidase subunit II C4X49_10090 PF08173 Membrane bound YbgT-like protein C4X49_10105 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C4X49_10115 PF02881 SRP54-type protein, helical bundle domain C4X49_10115 PF00448 SRP54-type protein, GTPase domain C4X49_10140 PF00571 CBS domain C4X49_10140 PF00478 IMP dehydrogenase / GMP reductase domain C4X49_10145 PF00202 Aminotransferase class-III C4X49_10150 PF00462 Glutaredoxin C4X49_10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_10160 PF03466 LysR substrate binding domain C4X49_10165 PF00557 Metallopeptidase family M24 C4X49_10170 PF05525 Branched-chain amino acid transport protein C4X49_10195 PF00381 PTS HPr component phosphorylation site C4X49_10195 PF02896 PEP-utilising enzyme, TIM barrel domain C4X49_10195 PF00391 PEP-utilising enzyme, mobile domain C4X49_10195 PF05524 PEP-utilising enzyme, N-terminal C4X49_10195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C4X49_10200 PF00294 pfkB family carbohydrate kinase C4X49_10205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C4X49_10205 PF02378 Phosphotransferase system, EIIC C4X49_10230 PF05922 Peptidase inhibitor I9 C4X49_10230 PF00082 Subtilase family C4X49_10240 PF00324 Amino acid permease C4X49_10245 PF00266 Aminotransferase class-V C4X49_10250 PF01037 Lrp/AsnC ligand binding domain C4X49_10275 PF13419 Haloacid dehalogenase-like hydrolase C4X49_10280 PF01479 S4 domain C4X49_10285 PF00154 recA bacterial DNA recombination protein C4X49_10290 PF02631 RecX family C4X49_10305 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_10305 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C4X49_10310 PF07977 FabA-like domain C4X49_10315 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C4X49_10315 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_10325 PF07244 Surface antigen variable number repeat C4X49_10325 PF01103 Surface antigen C4X49_10330 PF13180 PDZ domain C4X49_10330 PF17820 PDZ domain C4X49_10330 PF02163 Peptidase family M50 C4X49_10335 PF13288 DXP reductoisomerase C-terminal domain C4X49_10335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C4X49_10335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C4X49_10345 PF01255 Putative undecaprenyl diphosphate synthase C4X49_10350 PF01765 Ribosome recycling factor C4X49_10355 PF00696 Amino acid kinase family C4X49_10360 PF04055 Radical SAM superfamily C4X49_10360 PF18693 TRAM domain C4X49_10360 PF00919 Uncharacterized protein family UPF0004 C4X49_10365 PF00989 PAS fold C4X49_10365 PF00512 His Kinase A (phospho-acceptor) domain C4X49_10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_10370 PF00158 Sigma-54 interaction domain C4X49_10370 PF00072 Response regulator receiver domain C4X49_10370 PF02954 Bacterial regulatory protein, Fis family C4X49_10375 PF00440 Bacterial regulatory proteins, tetR family C4X49_10380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4X49_10380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4X49_10390 PF02542 YgbB family C4X49_10400 PF01266 FAD dependent oxidoreductase C4X49_10425 PF10415 Fumarase C C-terminus C4X49_10425 PF00206 Lyase C4X49_10430 PF16363 GDP-mannose 4,6 dehydratase C4X49_10435 PF02635 DsrE/DsrF-like family C4X49_10455 PF00892 EamA-like transporter family C4X49_10460 PF00392 Bacterial regulatory proteins, gntR family C4X49_10460 PF00155 Aminotransferase class I and II C4X49_10465 PF01638 HxlR-like helix-turn-helix C4X49_10470 PF00994 Probable molybdopterin binding domain C4X49_10470 PF03454 MoeA C-terminal region (domain IV) C4X49_10470 PF03453 MoeA N-terminal region (domain I and II) C4X49_10475 PF01967 MoaC family C4X49_10475 PF00994 Probable molybdopterin binding domain C4X49_10480 PF02391 MoaE protein C4X49_10490 PF04055 Radical SAM superfamily C4X49_10490 PF06463 Molybdenum Cofactor Synthesis C C4X49_10495 PF00384 Molybdopterin oxidoreductase C4X49_10495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4X49_10495 PF01568 Molydopterin dinucleotide binding domain C4X49_10500 PF12804 MobA-like NTP transferase domain C4X49_10505 PF04324 BFD-like [2Fe-2S] binding domain C4X49_10505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4X49_10505 PF00384 Molybdopterin oxidoreductase C4X49_10505 PF01568 Molydopterin dinucleotide binding domain C4X49_10510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4X49_10510 PF04324 BFD-like [2Fe-2S] binding domain C4X49_10510 PF18267 Rubredoxin NAD+ reductase C-terminal domain C4X49_10510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4X49_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_10515 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_10515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4X49_10515 PF18267 Rubredoxin NAD+ reductase C-terminal domain C4X49_10515 PF13806 Rieske-like [2Fe-2S] domain C4X49_10515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4X49_10515 PF04324 BFD-like [2Fe-2S] binding domain C4X49_10525 PF00072 Response regulator receiver domain C4X49_10525 PF00486 Transcriptional regulatory protein, C terminal C4X49_10530 PF00005 ABC transporter C4X49_10540 PF00817 impB/mucB/samB family C4X49_10540 PF11799 impB/mucB/samB family C-terminal domain C4X49_10540 PF13438 Domain of unknown function (DUF4113) C4X49_10545 PF06470 SMC proteins Flexible Hinge Domain C4X49_10545 PF02463 RecF/RecN/SMC N terminal domain C4X49_10550 PF12705 PD-(D/E)XK nuclease superfamily C4X49_10550 PF00580 UvrD/REP helicase N-terminal domain C4X49_10550 PF13361 UvrD-like helicase C-terminal domain C4X49_10575 PF00817 impB/mucB/samB family C4X49_10575 PF13438 Domain of unknown function (DUF4113) C4X49_10575 PF11798 IMS family HHH motif C4X49_10575 PF11799 impB/mucB/samB family C-terminal domain C4X49_10580 PF01220 Dehydroquinase class II C4X49_10585 PF00364 Biotin-requiring enzyme C4X49_10590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4X49_10590 PF00289 Biotin carboxylase, N-terminal domain C4X49_10590 PF02785 Biotin carboxylase C-terminal domain C4X49_10600 PF12832 MFS_1 like family C4X49_10820 PF01645 Conserved region in glutamate synthase C4X49_10835 PF01565 FAD binding domain C4X49_10835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C4X49_10840 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4X49_10850 PF00465 Iron-containing alcohol dehydrogenase C4X49_10855 PF03061 Thioesterase superfamily C4X49_10860 PF05506 Domain of unknown function (DUF756) C4X49_10860 PF04185 Phosphoesterase family C4X49_10865 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C4X49_10865 PF12170 DNA polymerase III tau subunit V interacting with alpha C4X49_10865 PF12169 DNA polymerase III subunits gamma and tau domain III C4X49_10870 PF07690 Major Facilitator Superfamily C4X49_10895 PF02803 Thiolase, C-terminal domain C4X49_10895 PF00108 Thiolase, N-terminal domain C4X49_10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_10905 PF03466 LysR substrate binding domain C4X49_10915 PF01810 LysE type translocator C4X49_10920 PF01037 Lrp/AsnC ligand binding domain C4X49_10925 PF03594 Benzoate membrane transport protein C4X49_10930 PF02308 MgtC family C4X49_10955 PF00582 Universal stress protein family C4X49_10960 PF00005 ABC transporter C4X49_10960 PF12848 ABC transporter C4X49_10980 PF00593 TonB dependent receptor C4X49_10980 PF07715 TonB-dependent Receptor Plug Domain C4X49_10995 PF00872 Transposase, Mutator family C4X49_11015 PF00924 Mechanosensitive ion channel C4X49_11025 PF00440 Bacterial regulatory proteins, tetR family C4X49_11040 PF01037 Lrp/AsnC ligand binding domain C4X49_11045 PF01817 Chorismate mutase type II C4X49_11065 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C4X49_11065 PF11940 Domain of unknown function (DUF3458) Ig-like fold C4X49_11065 PF01433 Peptidase family M1 domain C4X49_11080 PF02110 Hydroxyethylthiazole kinase family C4X49_11085 PF06445 GyrI-like small molecule binding domain C4X49_11095 PF05970 PIF1-like helicase C4X49_11095 PF14493 Helix-turn-helix domain C4X49_11100 PF00465 Iron-containing alcohol dehydrogenase C4X49_11115 PF00171 Aldehyde dehydrogenase family C4X49_11120 PF13520 Amino acid permease C4X49_11125 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C4X49_11130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C4X49_11135 PF00117 Glutamine amidotransferase class-I C4X49_11135 PF00958 GMP synthase C terminal domain C4X49_11135 PF02540 NAD synthase C4X49_11140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C4X49_11140 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4X49_11145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4X49_11150 PF00149 Calcineurin-like phosphoesterase C4X49_11160 PF00881 Nitroreductase family C4X49_11170 PF17209 Hfq protein C4X49_11180 PF08676 MutL C terminal dimerisation domain C4X49_11180 PF01119 DNA mismatch repair protein, C-terminal domain C4X49_11185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C4X49_11190 PF00849 RNA pseudouridylate synthase C4X49_11190 PF01479 S4 domain C4X49_11205 PF00849 RNA pseudouridylate synthase C4X49_11205 PF01479 S4 domain C4X49_11215 PF04284 Protein of unknown function (DUF441) C4X49_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_11220 PF03466 LysR substrate binding domain C4X49_11235 PF07690 Major Facilitator Superfamily C4X49_11240 PF00027 Cyclic nucleotide-binding domain C4X49_11240 PF00520 Ion transport protein C4X49_11250 PF00330 Aconitase family (aconitate hydratase) C4X49_11250 PF06434 Aconitate hydratase 2 N-terminus C4X49_11250 PF11791 Aconitate B N-terminal domain C4X49_11270 PF01103 Surface antigen C4X49_11270 PF17243 POTRA domain TamA domain 1 C4X49_11270 PF07244 Surface antigen variable number repeat C4X49_11275 PF07690 Major Facilitator Superfamily C4X49_11280 PF03232 Ubiquinone biosynthesis protein COQ7 C4X49_11290 PF00120 Glutamine synthetase, catalytic domain C4X49_11295 PF00486 Transcriptional regulatory protein, C terminal C4X49_11295 PF00072 Response regulator receiver domain C4X49_11300 PF13493 Domain of unknown function (DUF4118) C4X49_11300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_11300 PF00512 His Kinase A (phospho-acceptor) domain C4X49_11300 PF02702 Osmosensitive K+ channel His kinase sensor domain C4X49_11305 PF02669 K+-transporting ATPase, c chain C4X49_11315 PF03814 Potassium-transporting ATPase A subunit C4X49_11330 PF03109 ABC1 family C4X49_11335 PF00899 ThiF family C4X49_11340 PF01613 Flavin reductase like domain C4X49_11345 PF00501 AMP-binding enzyme C4X49_11345 PF13193 AMP-binding enzyme C-terminal domain C4X49_11350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_11350 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_11350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_11355 PF00106 short chain dehydrogenase C4X49_11360 PF12833 Helix-turn-helix domain C4X49_11365 PF09084 NMT1/THI5 like C4X49_11370 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_11375 PF17827 PrmC N-terminal domain C4X49_11375 PF13847 Methyltransferase domain C4X49_11380 PF00472 RF-1 domain C4X49_11380 PF03462 PCRF domain C4X49_11385 PF00872 Transposase, Mutator family C4X49_11395 PF03466 LysR substrate binding domain C4X49_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_11415 PF00296 Luciferase-like monooxygenase C4X49_11425 PF13994 PgaD-like protein C4X49_11430 PF00535 Glycosyl transferase family 2 C4X49_11435 PF14883 Hypothetical glycosyl hydrolase family 13 C4X49_11435 PF01522 Polysaccharide deacetylase C4X49_11445 PF03618 Kinase/pyrophosphorylase C4X49_11450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C4X49_11450 PF02896 PEP-utilising enzyme, TIM barrel domain C4X49_11450 PF00391 PEP-utilising enzyme, mobile domain C4X49_11460 PF06481 COX Aromatic Rich Motif C4X49_11460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4X49_11465 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4X49_11470 PF00510 Cytochrome c oxidase subunit III C4X49_11475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C4X49_11480 PF01040 UbiA prenyltransferase family C4X49_11485 PF01250 Ribosomal protein S6 C4X49_11490 PF01084 Ribosomal protein S18 C4X49_11495 PF01281 Ribosomal protein L9, N-terminal domain C4X49_11495 PF03948 Ribosomal protein L9, C-terminal domain C4X49_11500 PF00772 DnaB-like helicase N terminal domain C4X49_11500 PF03796 DnaB-like helicase C terminal domain C4X49_11505 PF01168 Alanine racemase, N-terminal domain C4X49_11505 PF00842 Alanine racemase, C-terminal domain C4X49_11515 PF08379 Bacterial transglutaminase-like N-terminal region C4X49_11515 PF01841 Transglutaminase-like superfamily C4X49_11525 PF14403 Circularly permuted ATP-grasp type 2 C4X49_11535 PF01134 Glucose inhibited division protein A C4X49_11535 PF13932 GidA associated domain C4X49_11555 PF02954 Bacterial regulatory protein, Fis family C4X49_11560 PF01808 AICARFT/IMPCHase bienzyme C4X49_11560 PF02142 MGS-like domain C4X49_11565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C4X49_11565 PF02843 Phosphoribosylglycinamide synthetase, C domain C4X49_11565 PF02844 Phosphoribosylglycinamide synthetase, N domain C4X49_11570 PF03180 NLPA lipoprotein C4X49_11575 PF09383 NIL domain C4X49_11575 PF00005 ABC transporter C4X49_11580 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_11585 PF00753 Metallo-beta-lactamase superfamily C4X49_11585 PF16123 Hydroxyacylglutathione hydrolase C-terminus C4X49_11595 PF00375 Sodium:dicarboxylate symporter family C4X49_11615 PF07995 Glucose / Sorbosone dehydrogenase C4X49_11625 PF13737 Transposase DDE domain C4X49_11635 PF01177 Asp/Glu/Hydantoin racemase C4X49_11650 PF02470 MlaD protein C4X49_11655 PF04403 Paraquat-inducible protein A C4X49_11680 PF08946 Osmosensory transporter coiled coil C4X49_11680 PF00083 Sugar (and other) transporter C4X49_11735 PF00392 Bacterial regulatory proteins, gntR family C4X49_11735 PF07729 FCD domain C4X49_11745 PF03616 Sodium/glutamate symporter C4X49_11750 PF00561 alpha/beta hydrolase fold C4X49_11775 PF04076 Bacterial OB fold (BOF) protein C4X49_11785 PF13649 Methyltransferase domain C4X49_11805 PF00324 Amino acid permease C4X49_11810 PF00171 Aldehyde dehydrogenase family C4X49_11815 PF00202 Aminotransferase class-III C4X49_11820 PF03466 LysR substrate binding domain C4X49_11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_11845 PF00069 Protein kinase domain C4X49_11865 PF00814 Glycoprotease family C4X49_11870 PF01165 Ribosomal protein S21 C4X49_11875 PF09424 Yqey-like protein C4X49_11880 PF01435 Peptidase family M48 C4X49_11885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4X49_11885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4X49_11900 PF00156 Phosphoribosyl transferase domain C4X49_11905 PF02674 Colicin V production protein C4X49_11910 PF01180 Dihydroorotate dehydrogenase C4X49_12005 PF00589 Phage integrase family C4X49_12015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4X49_12015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4X49_12020 PF00881 Nitroreductase family C4X49_12030 PF00270 DEAD/DEAH box helicase C4X49_12030 PF00271 Helicase conserved C-terminal domain C4X49_12035 PF00313 'Cold-shock' DNA-binding domain C4X49_12045 PF04545 Sigma-70, region 4 C4X49_12045 PF00140 Sigma-70 factor, region 1.2 C4X49_12045 PF04542 Sigma-70 region 2 C4X49_12050 PF04241 Protein of unknown function (DUF423) C4X49_12060 PF05690 Thiazole biosynthesis protein ThiG C4X49_12070 PF03883 Peroxide stress protein YaaA C4X49_12095 PF01137 RNA 3'-terminal phosphate cyclase C4X49_12095 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain C4X49_12100 PF01546 Peptidase family M20/M25/M40 C4X49_12100 PF07687 Peptidase dimerisation domain C4X49_12110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4X49_12115 PF01842 ACT domain C4X49_12115 PF01817 Chorismate mutase type II C4X49_12115 PF00800 Prephenate dehydratase C4X49_12125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_12125 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_12125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_12130 PF00375 Sodium:dicarboxylate symporter family C4X49_12140 PF00591 Glycosyl transferase family, a/b domain C4X49_12140 PF02885 Glycosyl transferase family, helical bundle domain C4X49_12145 PF07023 Protein of unknown function (DUF1315) C4X49_12150 PF01513 ATP-NAD kinase C4X49_12155 PF00905 Penicillin binding protein transpeptidase domain C4X49_12155 PF14814 Bifunctional transglycosylase second domain C4X49_12155 PF00912 Transglycosylase C4X49_12165 PF00293 NUDIX domain C4X49_12175 PF00512 His Kinase A (phospho-acceptor) domain C4X49_12175 PF08521 Two-component sensor kinase N-terminal C4X49_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_12180 PF00072 Response regulator receiver domain C4X49_12180 PF00486 Transcriptional regulatory protein, C terminal C4X49_12185 PF04076 Bacterial OB fold (BOF) protein C4X49_12190 PF00437 Type II/IV secretion system protein C4X49_12200 PF18389 TrmO C-terminal domain C4X49_12200 PF01980 tRNA-methyltransferase O C4X49_12205 PF00970 Oxidoreductase FAD-binding domain C4X49_12205 PF00175 Oxidoreductase NAD-binding domain C4X49_12210 PF02567 Phenazine biosynthesis-like protein C4X49_12215 PF00392 Bacterial regulatory proteins, gntR family C4X49_12215 PF00155 Aminotransferase class I and II C4X49_12225 PF00037 4Fe-4S binding domain C4X49_12230 PF00893 Small Multidrug Resistance protein C4X49_12235 PF00005 ABC transporter C4X49_12240 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_12245 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_12250 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4X49_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_12255 PF03466 LysR substrate binding domain C4X49_12260 PF13533 Biotin-lipoyl like C4X49_12265 PF00873 AcrB/AcrD/AcrF family C4X49_12270 PF02321 Outer membrane efflux protein C4X49_12275 PF00464 Serine hydroxymethyltransferase C4X49_12305 PF00005 ABC transporter C4X49_12310 PF01061 ABC-2 type transporter C4X49_12315 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C4X49_12315 PF14489 QueF-like protein C4X49_12325 PF01098 Cell cycle protein C4X49_12330 PF13406 Transglycosylase SLT domain C4X49_12335 PF05036 Sporulation related domain C4X49_12335 PF03330 Lytic transglycolase C4X49_12355 PF12833 Helix-turn-helix domain C4X49_12365 PF00889 Elongation factor TS C4X49_12370 PF00318 Ribosomal protein S2 C4X49_12375 PF00557 Metallopeptidase family M24 C4X49_12385 PF07690 Major Facilitator Superfamily C4X49_12395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4X49_12395 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_12400 PF04055 Radical SAM superfamily C4X49_12405 PF09317 Domain of unknown function (DUF1974) C4X49_12405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_12405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_12420 PF05221 S-adenosyl-L-homocysteine hydrolase C4X49_12420 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C4X49_12425 PF02219 Methylenetetrahydrofolate reductase C4X49_12430 PF04452 RNA methyltransferase C4X49_12435 PF00872 Transposase, Mutator family C4X49_12440 PF00990 Diguanylate cyclase, GGDEF domain C4X49_12440 PF03707 Bacterial signalling protein N terminal repeat C4X49_12440 PF00563 EAL domain C4X49_12445 PF00390 Malic enzyme, N-terminal domain C4X49_12445 PF03949 Malic enzyme, NAD binding domain C4X49_12445 PF01515 Phosphate acetyl/butaryl transferase C4X49_12450 PF12627 Probable RNA and SrmB- binding site of polymerase A C4X49_12450 PF01743 Poly A polymerase head domain C4X49_12455 PF13180 PDZ domain C4X49_12460 PF01784 NIF3 (NGG1p interacting factor 3) C4X49_12465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4X49_12465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4X49_12500 PF01040 UbiA prenyltransferase family C4X49_12505 PF04345 Chorismate lyase C4X49_12515 PF00854 POT family C4X49_12525 PF00117 Glutamine amidotransferase class-I C4X49_12530 PF01433 Peptidase family M1 domain C4X49_12530 PF11838 ERAP1-like C-terminal domain C4X49_12535 PF00593 TonB dependent receptor C4X49_12535 PF07715 TonB-dependent Receptor Plug Domain C4X49_12540 PF02885 Glycosyl transferase family, helical bundle domain C4X49_12540 PF00591 Glycosyl transferase family, a/b domain C4X49_12545 PF00218 Indole-3-glycerol phosphate synthase C4X49_12560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4X49_12560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4X49_12565 PF01799 [2Fe-2S] binding domain C4X49_12565 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_12575 PF00144 Beta-lactamase C4X49_12590 PF05675 Protein of unknown function (DUF817) C4X49_12595 PF01208 Uroporphyrinogen decarboxylase (URO-D) C4X49_12605 PF00425 chorismate binding enzyme C4X49_12620 PF00664 ABC transporter transmembrane region C4X49_12620 PF00005 ABC transporter C4X49_12625 PF00005 ABC transporter C4X49_12635 PF00282 Pyridoxal-dependent decarboxylase conserved domain C4X49_12640 PF00857 Isochorismatase family C4X49_12640 PF00550 Phosphopantetheine attachment site C4X49_12645 PF13193 AMP-binding enzyme C-terminal domain C4X49_12645 PF00501 AMP-binding enzyme C4X49_12650 PF00501 AMP-binding enzyme C4X49_12650 PF00668 Condensation domain C4X49_12650 PF00550 Phosphopantetheine attachment site C4X49_12655 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C4X49_12660 PF07715 TonB-dependent Receptor Plug Domain C4X49_12660 PF00593 TonB dependent receptor C4X49_12665 PF01497 Periplasmic binding protein C4X49_12675 PF01032 FecCD transport family C4X49_12680 PF01032 FecCD transport family C4X49_12685 PF00975 Thioesterase domain C4X49_12685 PF00550 Phosphopantetheine attachment site C4X49_12685 PF00501 AMP-binding enzyme C4X49_12685 PF13193 AMP-binding enzyme C-terminal domain C4X49_12685 PF00668 Condensation domain C4X49_12690 PF13193 AMP-binding enzyme C-terminal domain C4X49_12690 PF00501 AMP-binding enzyme C4X49_12690 PF00668 Condensation domain C4X49_12690 PF00550 Phosphopantetheine attachment site C4X49_12700 PF13309 HTH domain C4X49_12700 PF08348 YheO-like PAS domain C4X49_12705 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_12710 PF17954 Quercetinase C-terminal cupin domain C4X49_12710 PF02678 Pirin C4X49_12735 PF04328 Selenoprotein, putative C4X49_12740 PF02554 Carbon starvation protein CstA C4X49_12740 PF13722 5TM C-terminal transporter carbon starvation CstA C4X49_12745 PF09285 Elongation factor P, C-terminal C4X49_12745 PF08207 Elongation factor P (EF-P) KOW-like domain C4X49_12745 PF01132 Elongation factor P (EF-P) OB domain C4X49_12750 PF04055 Radical SAM superfamily C4X49_12760 PF00563 EAL domain C4X49_12760 PF12792 CSS motif domain associated with EAL C4X49_12765 PF01197 Ribosomal protein L31 C4X49_12770 PF13593 SBF-like CPA transporter family (DUF4137) C4X49_12775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4X49_12780 PF07690 Major Facilitator Superfamily C4X49_12785 PF05362 Lon protease (S16) C-terminal proteolytic domain C4X49_12785 PF13654 AAA domain C4X49_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_12790 PF03466 LysR substrate binding domain C4X49_12795 PF01551 Peptidase family M23 C4X49_12795 PF01476 LysM domain C4X49_12800 PF01975 Survival protein SurE C4X49_12815 PF00768 D-alanyl-D-alanine carboxypeptidase C4X49_12815 PF07943 Penicillin-binding protein 5, C-terminal domain C4X49_12820 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_12825 PF13344 Haloacid dehalogenase-like hydrolase C4X49_12825 PF00293 NUDIX domain C4X49_12835 PF04356 Protein of unknown function (DUF489) C4X49_12840 PF00206 Lyase C4X49_12840 PF08328 Adenylosuccinate lyase C-terminal C4X49_12855 PF08496 Peptidase family S49 N-terminal C4X49_12855 PF01343 Peptidase family S49 C4X49_12860 PF00005 ABC transporter C4X49_12865 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_12870 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_12875 PF12849 PBP superfamily domain C4X49_12880 PF00324 Amino acid permease C4X49_12885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4X49_12885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4X49_12885 PF00205 Thiamine pyrophosphate enzyme, central domain C4X49_12890 PF01037 Lrp/AsnC ligand binding domain C4X49_12895 PF00171 Aldehyde dehydrogenase family C4X49_12900 PF00282 Pyridoxal-dependent decarboxylase conserved domain C4X49_12905 PF00202 Aminotransferase class-III C4X49_12925 PF00487 Fatty acid desaturase C4X49_12930 PF00175 Oxidoreductase NAD-binding domain C4X49_12930 PF00111 2Fe-2S iron-sulfur cluster binding domain C4X49_12930 PF00970 Oxidoreductase FAD-binding domain C4X49_12935 PF00440 Bacterial regulatory proteins, tetR family C4X49_12945 PF18337 RapA N-terminal Tudor like domain C4X49_12945 PF00271 Helicase conserved C-terminal domain C4X49_12945 PF18339 RapA N-terminal Tudor like domain 1 C4X49_12945 PF00176 SNF2 family N-terminal domain C4X49_12945 PF12137 RNA polymerase recycling family C-terminal C4X49_12950 PF00849 RNA pseudouridylate synthase C4X49_12960 PF00202 Aminotransferase class-III C4X49_12965 PF02581 Thiamine monophosphate synthase C4X49_12990 PF05193 Peptidase M16 inactive domain C4X49_12990 PF00675 Insulinase (Peptidase family M16) C4X49_12995 PF02567 Phenazine biosynthesis-like protein C4X49_13005 PF03466 LysR substrate binding domain C4X49_13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_13010 PF06779 Uncharacterised MFS-type transporter YbfB C4X49_13030 PF00180 Isocitrate/isopropylmalate dehydrogenase C4X49_13035 PF00849 RNA pseudouridylate synthase C4X49_13040 PF03971 Monomeric isocitrate dehydrogenase C4X49_13050 PF00768 D-alanyl-D-alanine carboxypeptidase C4X49_13050 PF07943 Penicillin-binding protein 5, C-terminal domain C4X49_13055 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_13060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4X49_13065 PF03441 FAD binding domain of DNA photolyase C4X49_13065 PF00875 DNA photolyase C4X49_13095 PF02350 UDP-N-acetylglucosamine 2-epimerase C4X49_13110 PF03060 Nitronate monooxygenase C4X49_13115 PF01207 Dihydrouridine synthase (Dus) C4X49_13120 PF07759 Protein of unknown function (DUF1615) C4X49_13130 PF01472 PUA domain C4X49_13130 PF00696 Amino acid kinase family C4X49_13135 PF01926 50S ribosome-binding GTPase C4X49_13135 PF01018 GTP1/OBG C4X49_13150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4X49_13150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4X49_13155 PF00892 EamA-like transporter family C4X49_13165 PF17757 UvrB interaction domain C4X49_13165 PF12344 Ultra-violet resistance protein B C4X49_13165 PF02151 UvrB/uvrC motif C4X49_13165 PF04851 Type III restriction enzyme, res subunit C4X49_13165 PF00271 Helicase conserved C-terminal domain C4X49_13175 PF17151 Periplasmic sensor domain C4X49_13175 PF00990 Diguanylate cyclase, GGDEF domain C4X49_13195 PF00012 Hsp70 protein C4X49_13225 PF00106 short chain dehydrogenase C4X49_13230 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C4X49_13235 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C4X49_13240 PF02565 Recombination protein O C terminal C4X49_13240 PF11967 Recombination protein O N terminal C4X49_13250 PF01926 50S ribosome-binding GTPase C4X49_13250 PF07650 KH domain C4X49_13255 PF00035 Double-stranded RNA binding motif C4X49_13255 PF14622 Ribonuclease-III-like C4X49_13265 PF10502 Signal peptidase, peptidase S26 C4X49_13270 PF06421 GTP-binding protein LepA C-terminus C4X49_13270 PF03144 Elongation factor Tu domain 2 C4X49_13270 PF00009 Elongation factor Tu GTP binding domain C4X49_13270 PF00679 Elongation factor G C-terminus C4X49_13275 PF13302 Acetyltransferase (GNAT) domain C4X49_13285 PF13180 PDZ domain C4X49_13290 PF00890 FAD binding domain C4X49_13290 PF02910 Fumarate reductase flavoprotein C-term C4X49_13300 PF02223 Thymidylate kinase C4X49_13305 PF02618 YceG-like family C4X49_13310 PF01063 Amino-transferase class IV C4X49_13325 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_13330 PF00528 Binding-protein-dependent transport system inner membrane component C4X49_13335 PF00005 ABC transporter C4X49_13335 PF12857 TOBE-like domain C4X49_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_13340 PF03466 LysR substrate binding domain C4X49_13350 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C4X49_13350 PF14602 Hexapeptide repeat of succinyl-transferase C4X49_13350 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_13360 PF06508 Queuosine biosynthesis protein QueC C4X49_13375 PF00578 AhpC/TSA family C4X49_13385 PF01467 Cytidylyltransferase-like C4X49_13385 PF00293 NUDIX domain C4X49_13390 PF00378 Enoyl-CoA hydratase/isomerase C4X49_13395 PF01784 NIF3 (NGG1p interacting factor 3) C4X49_13400 PF07690 Major Facilitator Superfamily C4X49_13405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C4X49_13405 PF02769 AIR synthase related protein, C-terminal domain C4X49_13405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C4X49_13410 PF01966 HD domain C4X49_13415 PF01330 RuvA N terminal domain C4X49_13415 PF07499 RuvA, C-terminal domain C4X49_13420 PF05496 Holliday junction DNA helicase RuvB P-loop domain C4X49_13420 PF17864 RuvB AAA lid domain C4X49_13420 PF05491 RuvB C-terminal winged helix domain C4X49_13425 PF07687 Peptidase dimerisation domain C4X49_13425 PF01546 Peptidase family M20/M25/M40 C4X49_13430 PF03061 Thioesterase superfamily C4X49_13435 PF01618 MotA/TolQ/ExbB proton channel family C4X49_13440 PF02472 Biopolymer transport protein ExbD/TolR C4X49_13450 PF07676 WD40-like Beta Propeller Repeat C4X49_13450 PF04052 TolB amino-terminal domain C4X49_13455 PF00691 OmpA family C4X49_13465 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C4X49_13470 PF08032 RNA 2'-O ribose methyltransferase substrate binding C4X49_13470 PF00588 SpoU rRNA Methylase family C4X49_13510 PF11638 DnaA N-terminal domain C4X49_13510 PF08299 Bacterial dnaA protein helix-turn-helix C4X49_13510 PF00308 Bacterial dnaA protein C4X49_13515 PF01594 AI-2E family transporter C4X49_13520 PF02769 AIR synthase related protein, C-terminal domain C4X49_13520 PF00586 AIR synthase related protein, N-terminal domain C4X49_13525 PF00551 Formyl transferase C4X49_13530 PF12697 Alpha/beta hydrolase family C4X49_13535 PF06965 Na+/H+ antiporter 1 C4X49_13535 PF01343 Peptidase family S49 C4X49_13545 PF03772 Competence protein C4X49_13545 PF13567 Domain of unknown function (DUF4131) C4X49_13545 PF00753 Metallo-beta-lactamase superfamily C4X49_13550 PF00005 ABC transporter C4X49_13555 PF02687 FtsX-like permease family C4X49_13555 PF12704 MacB-like periplasmic core domain C4X49_13565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C4X49_13575 PF00266 Aminotransferase class-V C4X49_13585 PF13533 Biotin-lipoyl like C4X49_13605 PF00535 Glycosyl transferase family 2 C4X49_13620 PF00521 DNA gyrase/topoisomerase IV, subunit A C4X49_13620 PF03989 DNA gyrase C-terminal domain, beta-propeller C4X49_13625 PF00766 Electron transfer flavoprotein FAD-binding domain C4X49_13625 PF01012 Electron transfer flavoprotein domain C4X49_13630 PF01012 Electron transfer flavoprotein domain C4X49_13635 PF02899 Phage integrase, N-terminal SAM-like domain C4X49_13635 PF00589 Phage integrase family C4X49_13640 PF01810 LysE type translocator C4X49_13645 PF01678 Diaminopimelate epimerase C4X49_13650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4X49_13650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4X49_13660 PF00324 Amino acid permease C4X49_13665 PF18073 Rubredoxin metal binding domain C4X49_13675 PF00152 tRNA synthetases class II (D, K and N) C4X49_13680 PF11890 Domain of unknown function (DUF3410) C4X49_13680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4X49_13680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4X49_13685 PF06803 Protein of unknown function (DUF1232) C4X49_13690 PF02634 FdhD/NarQ family C4X49_13695 PF00384 Molybdopterin oxidoreductase C4X49_13700 PF02595 Glycerate kinase family C4X49_13715 PF00881 Nitroreductase family C4X49_13735 PF13737 Transposase DDE domain C4X49_13745 PF13193 AMP-binding enzyme C-terminal domain C4X49_13745 PF00668 Condensation domain C4X49_13745 PF00550 Phosphopantetheine attachment site C4X49_13745 PF00975 Thioesterase domain C4X49_13745 PF00501 AMP-binding enzyme C4X49_13805 PF07731 Multicopper oxidase C4X49_13805 PF07732 Multicopper oxidase C4X49_13805 PF00394 Multicopper oxidase C4X49_13815 PF00486 Transcriptional regulatory protein, C terminal C4X49_13815 PF00072 Response regulator receiver domain C4X49_13820 PF00672 HAMP domain C4X49_13820 PF00512 His Kinase A (phospho-acceptor) domain C4X49_13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_13865 PF14659 Phage integrase, N-terminal SAM-like domain C4X49_13865 PF00589 Phage integrase family C4X49_13875 PF03449 Transcription elongation factor, N-terminal C4X49_13875 PF01272 Transcription elongation factor, GreA/GreB, C-term C4X49_13880 PF01464 Transglycosylase SLT domain C4X49_13880 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4X49_13890 PF01171 PP-loop family C4X49_13900 PF01464 Transglycosylase SLT domain C4X49_13905 PF01435 Peptidase family M48 C4X49_13915 PF00873 AcrB/AcrD/AcrF family C4X49_13920 PF03009 Glycerophosphoryl diester phosphodiesterase family C4X49_13925 PF00753 Metallo-beta-lactamase superfamily C4X49_13930 PF01219 Prokaryotic diacylglycerol kinase C4X49_13935 PF00118 TCP-1/cpn60 chaperonin family C4X49_13940 PF00166 Chaperonin 10 Kd subunit C4X49_13955 PF00149 Calcineurin-like phosphoesterase C4X49_13965 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C4X49_13965 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C4X49_13970 PF01266 FAD dependent oxidoreductase C4X49_13970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C4X49_13975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4X49_13975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4X49_13985 PF00083 Sugar (and other) transporter C4X49_14000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C4X49_14000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C4X49_14035 PF00809 Pterin binding enzyme C4X49_14040 PF01434 Peptidase family M41 C4X49_14040 PF06480 FtsH Extracellular C4X49_14040 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_14040 PF17862 AAA+ lid domain C4X49_14045 PF01728 FtsJ-like methyltransferase C4X49_14050 PF01985 CRS1 / YhbY (CRM) domain C4X49_14065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C4X49_14065 PF00117 Glutamine amidotransferase class-I C4X49_14070 PF02142 MGS-like domain C4X49_14070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4X49_14070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4X49_14075 PF03449 Transcription elongation factor, N-terminal C4X49_14075 PF01272 Transcription elongation factor, GreA/GreB, C-term C4X49_14080 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_14085 PF00582 Universal stress protein family C4X49_14090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4X49_14100 PF09587 Bacterial capsule synthesis protein PGA_cap C4X49_14105 PF13737 Transposase DDE domain C4X49_14110 PF00999 Sodium/hydrogen exchanger family C4X49_14115 PF04228 Putative neutral zinc metallopeptidase C4X49_14120 PF05661 Protein of unknown function (DUF808) C4X49_14125 PF00579 tRNA synthetases class I (W and Y) C4X49_14130 PF02629 CoA binding domain C4X49_14130 PF00549 CoA-ligase C4X49_14135 PF00549 CoA-ligase C4X49_14135 PF08442 ATP-grasp domain C4X49_14140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4X49_14140 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_14145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4X49_14145 PF00364 Biotin-requiring enzyme C4X49_14145 PF02817 e3 binding domain C4X49_14150 PF02779 Transketolase, pyrimidine binding domain C4X49_14150 PF16870 2-oxoglutarate dehydrogenase C-terminal C4X49_14150 PF00676 Dehydrogenase E1 component C4X49_14150 PF16078 2-oxoglutarate dehydrogenase N-terminus C4X49_14165 PF13085 2Fe-2S iron-sulfur cluster binding domain C4X49_14170 PF00890 FAD binding domain C4X49_14170 PF02910 Fumarate reductase flavoprotein C-term C4X49_14175 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4X49_14180 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4X49_14185 PF00285 Citrate synthase, C-terminal domain C4X49_14210 PF04539 Sigma-70 region 3 C4X49_14210 PF00140 Sigma-70 factor, region 1.2 C4X49_14210 PF04545 Sigma-70, region 4 C4X49_14210 PF04546 Sigma-70, non-essential region C4X49_14210 PF03979 Sigma-70 factor, region 1.1 C4X49_14210 PF04542 Sigma-70 region 2 C4X49_14215 PF04359 Protein of unknown function (DUF493) C4X49_14220 PF03099 Biotin/lipoate A/B protein ligase family C4X49_14230 PF00465 Iron-containing alcohol dehydrogenase C4X49_14235 PF13520 Amino acid permease C4X49_14240 PF03358 NADPH-dependent FMN reductase C4X49_14245 PF01638 HxlR-like helix-turn-helix C4X49_14250 PF00588 SpoU rRNA Methylase family C4X49_14255 PF14824 Sirohaem biosynthesis protein central C4X49_14255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4X49_14255 PF10414 Sirohaem synthase dimerisation region C4X49_14260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4X49_14260 PF02403 Seryl-tRNA synthetase N-terminal domain C4X49_14270 PF03548 Outer membrane lipoprotein carrier protein LolA C4X49_14275 PF01016 Ribosomal L27 protein C4X49_14280 PF00829 Ribosomal prokaryotic L21 protein C4X49_14290 PF00348 Polyprenyl synthetase C4X49_14300 PF01569 PAP2 superfamily C4X49_14305 PF00529 HlyD membrane-fusion protein of T1SS C4X49_14305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4X49_14310 PF00873 AcrB/AcrD/AcrF family C4X49_14315 PF02321 Outer membrane efflux protein C4X49_14320 PF01906 Putative heavy-metal-binding C4X49_14325 PF01906 Putative heavy-metal-binding C4X49_14345 PF08264 Anticodon-binding domain of tRNA C4X49_14345 PF00133 tRNA synthetases class I (I, L, M and V) C4X49_14345 PF10458 Valyl tRNA synthetase tRNA binding arm C4X49_14365 PF03466 LysR substrate binding domain C4X49_14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_14375 PF00909 Ammonium Transporter Family C4X49_14385 PF08521 Two-component sensor kinase N-terminal C4X49_14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_14385 PF00512 His Kinase A (phospho-acceptor) domain C4X49_14390 PF00072 Response regulator receiver domain C4X49_14390 PF00486 Transcriptional regulatory protein, C terminal C4X49_14395 PF00884 Sulfatase C4X49_14395 PF08019 Phosphoethanolamine transferase EptA/EptB C4X49_14415 PF01734 Patatin-like phospholipase C4X49_14425 PF01145 SPFH domain / Band 7 family C4X49_14430 PF04237 YjbR C4X49_14435 PF00348 Polyprenyl synthetase C4X49_14440 PF04303 PrpF protein C4X49_14445 PF00324 Amino acid permease C4X49_14455 PF01965 DJ-1/PfpI family C4X49_14460 PF09277 Erythronolide synthase, docking C4X49_14460 PF00109 Beta-ketoacyl synthase, N-terminal domain C4X49_14460 PF08990 Erythronolide synthase docking C4X49_14460 PF02801 Beta-ketoacyl synthase, C-terminal domain C4X49_14460 PF08659 KR domain C4X49_14460 PF00550 Phosphopantetheine attachment site C4X49_14460 PF14765 Polyketide synthase dehydratase C4X49_14460 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_14460 PF16197 Ketoacyl-synthetase C-terminal extension C4X49_14460 PF00698 Acyl transferase domain C4X49_14465 PF12833 Helix-turn-helix domain C4X49_14465 PF06719 AraC-type transcriptional regulator N-terminus C4X49_14470 PF02673 Bacitracin resistance protein BacA C4X49_14490 PF02525 Flavodoxin-like fold C4X49_14505 PF01507 Phosphoadenosine phosphosulfate reductase family C4X49_14510 PF06974 Protein of unknown function (DUF1298) C4X49_14510 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C4X49_14520 PF10150 Ribonuclease E/G family C4X49_14520 PF00575 S1 RNA binding domain C4X49_14525 PF02545 Maf-like protein C4X49_14530 PF04093 rod shape-determining protein MreD C4X49_14535 PF04085 rod shape-determining protein MreC C4X49_14545 PF02686 Glu-tRNAGln amidotransferase C subunit C4X49_14550 PF01425 Amidase C4X49_14555 PF02934 GatB/GatE catalytic domain C4X49_14555 PF02637 GatB domain C4X49_14580 PF01431 Peptidase family M13 C4X49_14580 PF05649 Peptidase family M13 C4X49_14610 PF05992 SbmA/BacA-like family C4X49_14615 PF13291 ACT domain C4X49_14615 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_14620 PF01734 Patatin-like phospholipase C4X49_14625 PF01235 Sodium:alanine symporter family C4X49_14640 PF00881 Nitroreductase family C4X49_14645 PF07690 Major Facilitator Superfamily C4X49_14650 PF12805 FUSC-like inner membrane protein yccS C4X49_14660 PF00258 Flavodoxin C4X49_14660 PF00175 Oxidoreductase NAD-binding domain C4X49_14660 PF00667 FAD binding domain C4X49_14700 PF03734 L,D-transpeptidase catalytic domain C4X49_14700 PF17969 L,D-transpeptidase C-terminal domain C4X49_14705 PF04304 Protein of unknown function (DUF454) C4X49_14715 PF08085 Entericidin EcnA/B family C4X49_14720 PF07687 Peptidase dimerisation domain C4X49_14720 PF01546 Peptidase family M20/M25/M40 C4X49_14730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4X49_14730 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C4X49_14735 PF01584 CheW-like domain C4X49_14740 PF00072 Response regulator receiver domain C4X49_14745 PF00072 Response regulator receiver domain C4X49_14760 PF00873 AcrB/AcrD/AcrF family C4X49_14765 PF03129 Anticodon binding domain C4X49_14765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4X49_14765 PF04073 Aminoacyl-tRNA editing domain C4X49_14770 PF07411 Domain of unknown function (DUF1508) C4X49_14775 PF08274 PhnA Zinc-Ribbon C4X49_14775 PF03831 PhnA domain C4X49_14780 PF04343 Protein of unknown function, DUF488 C4X49_14785 PF12697 Alpha/beta hydrolase family C4X49_14790 PF00881 Nitroreductase family C4X49_14795 PF00296 Luciferase-like monooxygenase C4X49_14800 PF00857 Isochorismatase family C4X49_14805 PF01042 Endoribonuclease L-PSP C4X49_14810 PF01613 Flavin reductase like domain C4X49_14815 PF00860 Permease family C4X49_14820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4X49_14820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4X49_14830 PF01571 Aminomethyltransferase folate-binding domain C4X49_14835 PF13098 Thioredoxin-like domain C4X49_14835 PF10411 Disulfide bond isomerase protein N-terminus C4X49_14850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_14855 PF07715 TonB-dependent Receptor Plug Domain C4X49_14855 PF00593 TonB dependent receptor C4X49_14875 PF02245 Methylpurine-DNA glycosylase (MPG) C4X49_14880 PF06827 Zinc finger found in FPG and IleRS C4X49_14880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C4X49_14880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C4X49_14895 PF01741 Large-conductance mechanosensitive channel, MscL C4X49_14905 PF00860 Permease family C4X49_14910 PF05175 Methyltransferase small domain C4X49_14910 PF08468 Methyltransferase small domain N-terminal C4X49_14915 PF00324 Amino acid permease C4X49_14920 PF01139 tRNA-splicing ligase RtcB C4X49_14930 PF00691 OmpA family C4X49_14930 PF13505 Outer membrane protein beta-barrel domain C4X49_14940 PF02803 Thiolase, C-terminal domain C4X49_14940 PF00108 Thiolase, N-terminal domain C4X49_14950 PF00893 Small Multidrug Resistance protein C4X49_14960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4X49_14960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4X49_14965 PF01011 PQQ enzyme repeat C4X49_14970 PF04966 Carbohydrate-selective porin, OprB family C4X49_14975 PF02515 CoA-transferase family III C4X49_14980 PF02311 AraC-like ligand binding domain C4X49_14980 PF12833 Helix-turn-helix domain C4X49_14985 PF00108 Thiolase, N-terminal domain C4X49_14985 PF02803 Thiolase, C-terminal domain C4X49_14990 PF00378 Enoyl-CoA hydratase/isomerase C4X49_14990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4X49_14990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4X49_15015 PF03006 Haemolysin-III related C4X49_15020 PF07690 Major Facilitator Superfamily C4X49_15020 PF00083 Sugar (and other) transporter C4X49_15030 PF01043 SecA preprotein cross-linking domain C4X49_15030 PF07517 SecA DEAD-like domain C4X49_15030 PF07516 SecA Wing and Scaffold domain C4X49_15030 PF02810 SEC-C motif C4X49_15035 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4X49_15035 PF00578 AhpC/TSA family C4X49_15040 PF00753 Metallo-beta-lactamase superfamily C4X49_15055 PF02875 Mur ligase family, glutamate ligase domain C4X49_15055 PF08245 Mur ligase middle domain C4X49_15060 PF01039 Carboxyl transferase domain C4X49_15065 PF00290 Tryptophan synthase alpha chain C4X49_15075 PF13737 Transposase DDE domain C4X49_15095 PF00291 Pyridoxal-phosphate dependent enzyme C4X49_15100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C4X49_15105 PF00593 TonB dependent receptor C4X49_15105 PF07715 TonB-dependent Receptor Plug Domain C4X49_15110 PF01923 Cobalamin adenosyltransferase C4X49_15130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C4X49_15135 PF00072 Response regulator receiver domain C4X49_15135 PF00486 Transcriptional regulatory protein, C terminal C4X49_15140 PF00512 His Kinase A (phospho-acceptor) domain C4X49_15140 PF00672 HAMP domain C4X49_15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_15145 PF13737 Transposase DDE domain C4X49_15155 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4X49_15155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_15155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_15155 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_15160 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4X49_15160 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_15160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_15160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_15165 PF06146 Phosphate-starvation-inducible E C4X49_15185 PF00593 TonB dependent receptor C4X49_15185 PF07715 TonB-dependent Receptor Plug Domain C4X49_15195 PF01336 OB-fold nucleic acid binding domain C4X49_15195 PF02938 GAD domain C4X49_15195 PF00152 tRNA synthetases class II (D, K and N) C4X49_15210 PF00535 Glycosyl transferase family 2 C4X49_15215 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C4X49_15220 PF00483 Nucleotidyl transferase C4X49_15225 PF04321 RmlD substrate binding domain C4X49_15230 PF16363 GDP-mannose 4,6 dehydratase C4X49_15240 PF13439 Glycosyltransferase Family 4 C4X49_15240 PF00534 Glycosyl transferases group 1 C4X49_15245 PF01522 Polysaccharide deacetylase C4X49_15255 PF01063 Amino-transferase class IV C4X49_15260 PF03710 Glutamate-ammonia ligase adenylyltransferase C4X49_15260 PF08335 GlnD PII-uridylyltransferase C4X49_15265 PF07689 KaiB domain C4X49_15265 PF00512 His Kinase A (phospho-acceptor) domain C4X49_15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_15270 PF11867 Domain of unknown function (DUF3387) C4X49_15270 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C4X49_15270 PF18766 SWI2/SNF2 ATPase C4X49_15285 PF02384 N-6 DNA Methylase C4X49_15300 PF02796 Helix-turn-helix domain of resolvase C4X49_15300 PF00239 Resolvase, N terminal domain C4X49_15320 PF00589 Phage integrase family C4X49_15320 PF13356 Arm DNA-binding domain C4X49_15330 PF02547 Queuosine biosynthesis protein C4X49_15345 PF01702 Queuine tRNA-ribosyltransferase C4X49_15350 PF02699 Preprotein translocase subunit C4X49_15355 PF07549 SecD/SecF GG Motif C4X49_15355 PF13721 SecD export protein N-terminal TM region C4X49_15355 PF02355 Protein export membrane protein C4X49_15360 PF07549 SecD/SecF GG Motif C4X49_15360 PF02355 Protein export membrane protein C4X49_15375 PF04127 DNA / pantothenate metabolism flavoprotein C4X49_15375 PF02441 Flavoprotein C4X49_15380 PF04002 RadC-like JAB domain C4X49_15385 PF01062 Bestrophin, RFP-TM, chloride channel C4X49_15390 PF02811 PHP domain C4X49_15395 PF04279 Intracellular septation protein A C4X49_15400 PF03795 YCII-related domain C4X49_15410 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C4X49_15410 PF01266 FAD dependent oxidoreductase C4X49_15420 PF04461 Protein of unknown function (DUF520) C4X49_15430 PF03061 Thioesterase superfamily C4X49_15435 PF00085 Thioredoxin C4X49_15440 PF00561 alpha/beta hydrolase fold C4X49_15445 PF00753 Metallo-beta-lactamase superfamily C4X49_15445 PF04273 Putative phosphatase (DUF442) C4X49_15455 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_15455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4X49_15490 PF00990 Diguanylate cyclase, GGDEF domain C4X49_15490 PF17152 Periplasmic sensor domain C4X49_15495 PF01389 OmpA-like transmembrane domain C4X49_15495 PF00691 OmpA family C4X49_15500 PF10518 TAT (twin-arginine translocation) pathway signal sequence C4X49_15500 PF00149 Calcineurin-like phosphoesterase C4X49_15505 PF13091 PLD-like domain C4X49_15515 PF13167 GTP-binding GTPase N-terminal C4X49_15515 PF01926 50S ribosome-binding GTPase C4X49_15515 PF16360 GTP-binding GTPase Middle Region C4X49_15535 PF00149 Calcineurin-like phosphoesterase C4X49_15540 PF00398 Ribosomal RNA adenine dimethylase C4X49_15545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C4X49_15550 PF00572 Ribosomal protein L13 C4X49_15555 PF00380 Ribosomal protein S9/S16 C4X49_15560 PF13417 Glutathione S-transferase, N-terminal domain C4X49_15560 PF00043 Glutathione S-transferase, C-terminal domain C4X49_15565 PF04386 Stringent starvation protein B C4X49_15575 PF00364 Biotin-requiring enzyme C4X49_15575 PF00289 Biotin carboxylase, N-terminal domain C4X49_15575 PF02785 Biotin carboxylase C-terminal domain C4X49_15575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4X49_15585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_15585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_15585 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_15590 PF01039 Carboxyl transferase domain C4X49_15605 PF17932 Tetracyclin repressor-like, C-terminal domain C4X49_15605 PF00440 Bacterial regulatory proteins, tetR family C4X49_15610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_15610 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_15610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_15655 PF01066 CDP-alcohol phosphatidyltransferase C4X49_15660 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C4X49_15680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C4X49_15680 PF00056 lactate/malate dehydrogenase, NAD binding domain C4X49_15690 PF10145 Phage-related minor tail protein C4X49_15690 PF01464 Transglycosylase SLT domain C4X49_15690 PF01551 Peptidase family M23 C4X49_15695 PF00919 Uncharacterized protein family UPF0004 C4X49_15695 PF04055 Radical SAM superfamily C4X49_15695 PF01938 TRAM domain C4X49_15700 PF02562 PhoH-like protein C4X49_15705 PF02130 Uncharacterized protein family UPF0054 C4X49_15730 PF03358 NADPH-dependent FMN reductase C4X49_15735 PF03631 Virulence factor BrkB C4X49_15740 PF00892 EamA-like transporter family C4X49_15745 PF12833 Helix-turn-helix domain C4X49_15750 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4X49_15795 PF00773 RNB domain C4X49_15795 PF08206 Ribonuclease B OB domain C4X49_15795 PF17876 Cold shock domain C4X49_15795 PF00575 S1 RNA binding domain C4X49_15795 PF08461 Ribonuclease R winged-helix domain C4X49_15800 PF01432 Peptidase family M3 C4X49_15805 PF09526 Probable metal-binding protein (DUF2387) C4X49_15820 PF00872 Transposase, Mutator family C4X49_15845 PF03937 Flavinator of succinate dehydrogenase C4X49_15850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_15850 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_15850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_15855 PF00743 Flavin-binding monooxygenase-like C4X49_15860 PF01196 Ribosomal protein L17 C4X49_15865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C4X49_15865 PF01000 RNA polymerase Rpb3/RpoA insert domain C4X49_15865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C4X49_15870 PF01479 S4 domain C4X49_15870 PF00163 Ribosomal protein S4/S9 N-terminal domain C4X49_15875 PF00411 Ribosomal protein S11 C4X49_15880 PF00416 Ribosomal protein S13/S18 C4X49_15885 PF00444 Ribosomal protein L36 C4X49_15890 PF00344 SecY translocase C4X49_15895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C4X49_15900 PF00327 Ribosomal protein L30p/L7e C4X49_15905 PF03719 Ribosomal protein S5, C-terminal domain C4X49_15905 PF00333 Ribosomal protein S5, N-terminal domain C4X49_15910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C4X49_15915 PF00347 Ribosomal protein L6 C4X49_15920 PF00410 Ribosomal protein S8 C4X49_15925 PF00253 Ribosomal protein S14p/S29e C4X49_15930 PF00281 Ribosomal protein L5 C4X49_15930 PF00673 ribosomal L5P family C-terminus C4X49_15935 PF00467 KOW motif C4X49_15935 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C4X49_15940 PF00238 Ribosomal protein L14p/L23e C4X49_15945 PF00366 Ribosomal protein S17 C4X49_15950 PF00831 Ribosomal L29 protein C4X49_15955 PF00252 Ribosomal protein L16p/L10e C4X49_15960 PF07650 KH domain C4X49_15960 PF00189 Ribosomal protein S3, C-terminal domain C4X49_15965 PF00237 Ribosomal protein L22p/L17e C4X49_15970 PF00203 Ribosomal protein S19 C4X49_15975 PF03947 Ribosomal Proteins L2, C-terminal domain C4X49_15975 PF00181 Ribosomal Proteins L2, RNA binding domain C4X49_15980 PF00276 Ribosomal protein L23 C4X49_15985 PF00573 Ribosomal protein L4/L1 family C4X49_15990 PF00297 Ribosomal protein L3 C4X49_15995 PF00338 Ribosomal protein S10p/S20e C4X49_16000 PF00117 Glutamine amidotransferase class-I C4X49_16005 PF01053 Cys/Met metabolism PLP-dependent enzyme C4X49_16010 PF05872 Bacterial protein of unknown function (DUF853) C4X49_16020 PF00175 Oxidoreductase NAD-binding domain C4X49_16020 PF00970 Oxidoreductase FAD-binding domain C4X49_16020 PF00042 Globin C4X49_16025 PF02082 Transcriptional regulator C4X49_16030 PF01926 50S ribosome-binding GTPase C4X49_16040 PF00375 Sodium:dicarboxylate symporter family C4X49_16050 PF01553 Acyltransferase C4X49_16065 PF17191 RecG wedge domain C4X49_16065 PF00271 Helicase conserved C-terminal domain C4X49_16065 PF00270 DEAD/DEAH box helicase C4X49_16070 PF00156 Phosphoribosyl transferase domain C4X49_16075 PF00293 NUDIX domain C4X49_16080 PF03641 Possible lysine decarboxylase C4X49_16085 PF01544 CorA-like Mg2+ transporter protein C4X49_16095 PF05494 MlaC protein C4X49_16105 PF02405 Permease MlaE C4X49_16110 PF00005 ABC transporter C4X49_16115 PF00271 Helicase conserved C-terminal domain C4X49_16115 PF00270 DEAD/DEAH box helicase C4X49_16115 PF03880 DbpA RNA binding domain C4X49_16115 PF12343 Cold shock protein DEAD box A C4X49_16120 PF00459 Inositol monophosphatase family C4X49_16125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C4X49_16125 PF02780 Transketolase, C-terminal domain C4X49_16125 PF02779 Transketolase, pyrimidine binding domain C4X49_16130 PF00925 GTP cyclohydrolase II C4X49_16140 PF08501 Shikimate dehydrogenase substrate binding domain C4X49_16140 PF01488 Shikimate / quinate 5-dehydrogenase C4X49_16140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C4X49_16150 PF12806 Acetyl-CoA dehydrogenase C-terminal like C4X49_16150 PF02770 Acyl-CoA dehydrogenase, middle domain C4X49_16150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4X49_16150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4X49_16160 PF04024 PspC domain C4X49_16165 PF00571 CBS domain C4X49_16185 PF13737 Transposase DDE domain C4X49_16190 PF02091 Glycyl-tRNA synthetase alpha subunit C4X49_16195 PF02092 Glycyl-tRNA synthetase beta subunit C4X49_16195 PF05746 DALR anticodon binding domain C4X49_16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_16215 PF03466 LysR substrate binding domain C4X49_16220 PF13610 DDE domain C4X49_16225 PF00107 Zinc-binding dehydrogenase C4X49_16225 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_16230 PF06100 MCRA family C4X49_16240 PF13610 DDE domain C4X49_16255 PF13610 DDE domain C4X49_16265 PF11809 Domain of unknown function (DUF3330) C4X49_16265 PF00563 EAL domain C4X49_16275 PF05052 MerE protein C4X49_16280 PF13411 MerR HTH family regulatory protein C4X49_16285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4X49_16285 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_16285 PF00403 Heavy-metal-associated domain C4X49_16290 PF03203 MerC mercury resistance protein C4X49_16295 PF00403 Heavy-metal-associated domain C4X49_16300 PF02411 MerT mercuric transport protein C4X49_16305 PF09278 MerR, DNA binding C4X49_16305 PF00376 MerR family regulatory protein C4X49_16310 PF13610 DDE domain C4X49_16335 PF02583 Metal-sensitive transcriptional repressor C4X49_16355 PF00884 Sulfatase C4X49_16355 PF08019 Phosphoethanolamine transferase EptA/EptB C4X49_16360 PF00486 Transcriptional regulatory protein, C terminal C4X49_16360 PF00072 Response regulator receiver domain C4X49_16370 PF13610 DDE domain C4X49_16380 PF01219 Prokaryotic diacylglycerol kinase C4X49_16405 PF13610 DDE domain C4X49_16410 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C4X49_16410 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C4X49_16420 PF00324 Amino acid permease C4X49_16430 PF08241 Methyltransferase domain C4X49_16450 PF13614 AAA domain C4X49_16455 PF01594 AI-2E family transporter C4X49_16460 PF00080 Copper/zinc superoxide dismutase (SODC) C4X49_16465 PF12805 FUSC-like inner membrane protein yccS C4X49_16470 PF07690 Major Facilitator Superfamily C4X49_16480 PF02525 Flavodoxin-like fold C4X49_16485 PF03992 Antibiotic biosynthesis monooxygenase C4X49_16495 PF01565 FAD binding domain C4X49_16495 PF02913 FAD linked oxidases, C-terminal domain C4X49_16500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4X49_16500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4X49_16505 PF00892 EamA-like transporter family C4X49_16510 PF00892 EamA-like transporter family C4X49_16520 PF01925 Sulfite exporter TauE/SafE C4X49_16525 PF09157 Pseudouridine synthase II TruB, C-terminal C4X49_16525 PF16198 tRNA pseudouridylate synthase B C-terminal domain C4X49_16525 PF01509 TruB family pseudouridylate synthase (N terminal domain) C4X49_16530 PF03280 Proteobacterial lipase chaperone protein C4X49_16535 PF00561 alpha/beta hydrolase fold C4X49_16540 PF01245 Ribosomal protein L19 C4X49_16545 PF01746 tRNA (Guanine-1)-methyltransferase C4X49_16550 PF05239 PRC-barrel domain C4X49_16550 PF01782 RimM N-terminal domain C4X49_16555 PF00886 Ribosomal protein S16 C4X49_16595 PF02401 LytB protein C4X49_16600 PF00625 Guanylate kinase C4X49_16605 PF01192 RNA polymerase Rpb6 C4X49_16615 PF02824 TGS domain C4X49_16615 PF13291 ACT domain C4X49_16615 PF04607 Region found in RelA / SpoT proteins C4X49_16620 PF01042 Endoribonuclease L-PSP C4X49_16625 PF04324 BFD-like [2Fe-2S] binding domain C4X49_16630 PF00210 Ferritin-like domain C4X49_16635 PF15864 Protein glycosylation ligase C4X49_16635 PF04932 O-Antigen ligase C4X49_16635 PF11846 Virulence factor membrane-bound polymerase, C-terminal C4X49_16645 PF13737 Transposase DDE domain C4X49_16655 PF00114 Pilin (bacterial filament) C4X49_16655 PF07963 Prokaryotic N-terminal methylation motif C4X49_16665 PF04536 TPM domain C4X49_16670 PF04011 LemA family C4X49_16680 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4X49_16680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4X49_16685 PF01493 GXGXG motif C4X49_16685 PF00310 Glutamine amidotransferases class-II C4X49_16685 PF01645 Conserved region in glutamate synthase C4X49_16685 PF04898 Glutamate synthase central domain C4X49_16695 PF01761 3-dehydroquinate synthase C4X49_16700 PF01202 Shikimate kinase C4X49_16705 PF11741 AMIN domain C4X49_16705 PF00263 Bacterial type II and III secretion system protein C4X49_16705 PF07660 Secretin and TonB N terminus short domain C4X49_16705 PF03958 Bacterial type II/III secretion system short domain C4X49_16740 PF00912 Transglycosylase C4X49_16740 PF17092 Penicillin-binding protein OB-like domain C4X49_16740 PF00905 Penicillin binding protein transpeptidase domain C4X49_16745 PF13847 Methyltransferase domain C4X49_16755 PF00953 Glycosyl transferase family 4 C4X49_16760 PF01225 Mur ligase family, catalytic domain C4X49_16760 PF08245 Mur ligase middle domain C4X49_16760 PF02875 Mur ligase family, glutamate ligase domain C4X49_16765 PF02875 Mur ligase family, glutamate ligase domain C4X49_16765 PF08245 Mur ligase middle domain C4X49_16765 PF01225 Mur ligase family, catalytic domain C4X49_16770 PF00905 Penicillin binding protein transpeptidase domain C4X49_16770 PF03717 Penicillin-binding Protein dimerisation domain C4X49_16780 PF01795 MraW methylase family C4X49_16795 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4X49_16810 PF00324 Amino acid permease C4X49_16840 PF01545 Cation efflux family C4X49_16845 PF00873 AcrB/AcrD/AcrF family C4X49_16850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4X49_16850 PF00529 HlyD membrane-fusion protein of T1SS C4X49_16870 PF04191 Phospholipid methyltransferase C4X49_16905 PF00005 ABC transporter C4X49_16905 PF12848 ABC transporter C4X49_16915 PF00106 short chain dehydrogenase C4X49_16920 PF00916 Sulfate permease family C4X49_16920 PF01740 STAS domain C4X49_16925 PF17674 HHH domain C4X49_16925 PF09371 Tex-like protein N-terminal domain C4X49_16925 PF00575 S1 RNA binding domain C4X49_16925 PF16921 Tex protein YqgF-like domain C4X49_16930 PF00072 Response regulator receiver domain C4X49_16930 PF00486 Transcriptional regulatory protein, C terminal C4X49_16935 PF00672 HAMP domain C4X49_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_16935 PF00512 His Kinase A (phospho-acceptor) domain C4X49_16945 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C4X49_16945 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C4X49_16950 PF00583 Acetyltransferase (GNAT) family C4X49_16970 PF00475 Imidazoleglycerol-phosphate dehydratase C4X49_16975 PF00117 Glutamine amidotransferase class-I C4X49_16990 PF00977 Histidine biosynthesis protein C4X49_17015 PF01636 Phosphotransferase enzyme family C4X49_17020 PF00977 Histidine biosynthesis protein C4X49_17035 PF00230 Major intrinsic protein C4X49_17060 PF02705 K+ potassium transporter C4X49_17085 PF12833 Helix-turn-helix domain C4X49_17085 PF02311 AraC-like ligand binding domain C4X49_17090 PF00248 Aldo/keto reductase family C4X49_17110 PF03466 LysR substrate binding domain C4X49_17110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_17115 PF07690 Major Facilitator Superfamily C4X49_17125 PF03466 LysR substrate binding domain C4X49_17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_17135 PF00465 Iron-containing alcohol dehydrogenase C4X49_17145 PF00083 Sugar (and other) transporter C4X49_17160 PF00872 Transposase, Mutator family C4X49_17235 PF00872 Transposase, Mutator family C4X49_17245 PF02463 RecF/RecN/SMC N terminal domain C4X49_17260 PF01593 Flavin containing amine oxidoreductase C4X49_17265 PF05726 Pirin C-terminal cupin domain C4X49_17265 PF02678 Pirin C4X49_17270 PF00857 Isochorismatase family C4X49_17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_17280 PF00171 Aldehyde dehydrogenase family C4X49_17285 PF00202 Aminotransferase class-III C4X49_17290 PF00155 Aminotransferase class I and II C4X49_17290 PF00392 Bacterial regulatory proteins, gntR family C4X49_17295 PF00324 Amino acid permease C4X49_17305 PF03591 AzlC protein C4X49_17315 PF00436 Single-strand binding protein family C4X49_17320 PF07690 Major Facilitator Superfamily C4X49_17330 PF02581 Thiamine monophosphate synthase C4X49_17330 PF08543 Phosphomethylpyrimidine kinase C4X49_17330 PF03070 TENA/THI-4/PQQC family C4X49_17335 PF06942 GlpM protein C4X49_17345 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_17345 PF00107 Zinc-binding dehydrogenase C4X49_17350 PF00440 Bacterial regulatory proteins, tetR family C4X49_17350 PF16925 Tetracyclin repressor-like, C-terminal domain C4X49_17355 PF00005 ABC transporter C4X49_17355 PF17755 UvrA DNA-binding domain C4X49_17355 PF17760 UvrA interaction domain C4X49_17360 PF17158 Membrane-associated sensor, integral membrane domain C4X49_17360 PF00990 Diguanylate cyclase, GGDEF domain C4X49_17370 PF02028 BCCT, betaine/carnitine/choline family transporter C4X49_17380 PF00474 Sodium:solute symporter family C4X49_17385 PF04341 Protein of unknown function, DUF485 C4X49_17390 PF00512 His Kinase A (phospho-acceptor) domain C4X49_17390 PF00072 Response regulator receiver domain C4X49_17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_17390 PF00672 HAMP domain C4X49_17390 PF01627 Hpt domain C4X49_17400 PF00072 Response regulator receiver domain C4X49_17400 PF00196 Bacterial regulatory proteins, luxR family C4X49_17405 PF03358 NADPH-dependent FMN reductase C4X49_17410 PF00296 Luciferase-like monooxygenase C4X49_17415 PF01037 Lrp/AsnC ligand binding domain C4X49_17420 PF00857 Isochorismatase family C4X49_17425 PF13193 AMP-binding enzyme C-terminal domain C4X49_17425 PF00501 AMP-binding enzyme C4X49_17425 PF16177 Acetyl-coenzyme A synthetase N-terminus C4X49_17435 PF00924 Mechanosensitive ion channel C4X49_17440 PF04452 RNA methyltransferase C4X49_17445 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C4X49_17450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_17470 PF02272 DHHA1 domain C4X49_17470 PF17768 RecJ OB domain C4X49_17470 PF01368 DHH family C4X49_17475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C4X49_17475 PF01243 Pyridoxamine 5'-phosphate oxidase C4X49_17480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4X49_17480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4X49_17480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4X49_17480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4X49_17485 PF00571 CBS domain C4X49_17485 PF00478 IMP dehydrogenase / GMP reductase domain C4X49_17490 PF03692 Putative zinc- or iron-chelating domain C4X49_17495 PF01613 Flavin reductase like domain C4X49_17495 PF00258 Flavodoxin C4X49_17500 PF07715 TonB-dependent Receptor Plug Domain C4X49_17500 PF00593 TonB dependent receptor C4X49_17505 PF01169 Uncharacterized protein family UPF0016 C4X49_17515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4X49_17515 PF00364 Biotin-requiring enzyme C4X49_17515 PF02817 e3 binding domain C4X49_17520 PF17831 Pyruvate dehydrogenase E1 component middle domain C4X49_17520 PF00456 Transketolase, thiamine diphosphate binding domain C4X49_17525 PF01551 Peptidase family M23 C4X49_17535 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C4X49_17540 PF12327 FtsZ family, C-terminal domain C4X49_17540 PF00091 Tubulin/FtsZ family, GTPase domain C4X49_17545 PF02491 SHS2 domain inserted in FTSA C4X49_17550 PF03799 Cell division protein FtsQ C4X49_17550 PF08478 POTRA domain, FtsQ-type C4X49_17555 PF07478 D-ala D-ala ligase C-terminus C4X49_17555 PF01820 D-ala D-ala ligase N-terminus C4X49_17560 PF01225 Mur ligase family, catalytic domain C4X49_17560 PF08245 Mur ligase middle domain C4X49_17560 PF02875 Mur ligase family, glutamate ligase domain C4X49_17565 PF04101 Glycosyltransferase family 28 C-terminal domain C4X49_17565 PF03033 Glycosyltransferase family 28 N-terminal domain C4X49_17570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C4X49_17570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C4X49_17580 PF07715 TonB-dependent Receptor Plug Domain C4X49_17580 PF00593 TonB dependent receptor C4X49_17605 PF13737 Transposase DDE domain C4X49_17615 PF00156 Phosphoribosyl transferase domain C4X49_17620 PF03372 Endonuclease/Exonuclease/phosphatase family C4X49_17625 PF03960 ArsC family C4X49_17635 PF07859 alpha/beta hydrolase fold C4X49_17645 PF17151 Periplasmic sensor domain C4X49_17645 PF00990 Diguanylate cyclase, GGDEF domain C4X49_17650 PF02683 Cytochrome C biogenesis protein transmembrane region C4X49_17650 PF11412 Disulphide bond corrector protein DsbC C4X49_17680 PF00576 HIUase/Transthyretin family C4X49_17685 PF00860 Permease family C4X49_17695 PF01494 FAD binding domain C4X49_17700 PF03561 Allantoicase repeat C4X49_17705 PF04115 Ureidoglycolate lyase C4X49_17710 PF00106 short chain dehydrogenase C4X49_17715 PF00986 DNA gyrase B subunit, carboxyl terminus C4X49_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_17715 PF00204 DNA gyrase B C4X49_17715 PF01751 Toprim domain C4X49_17720 PF05728 Uncharacterised protein family (UPF0227) C4X49_17745 PF02600 Disulfide bond formation protein DsbB C4X49_17750 PF04262 Glutamate-cysteine ligase C4X49_17765 PF04286 Protein of unknown function (DUF445) C4X49_17770 PF00155 Aminotransferase class I and II C4X49_17775 PF01554 MatE C4X49_17780 PF00106 short chain dehydrogenase C4X49_17790 PF00486 Transcriptional regulatory protein, C terminal C4X49_17790 PF00072 Response regulator receiver domain C4X49_17795 PF00512 His Kinase A (phospho-acceptor) domain C4X49_17795 PF00989 PAS fold C4X49_17795 PF11808 Phosphate regulon sensor protein PhoR C4X49_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4X49_17805 PF02666 Phosphatidylserine decarboxylase C4X49_17810 PF00581 Rhodanese-like domain C4X49_17815 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C4X49_17815 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C4X49_17825 PF06628 Catalase-related immune-responsive C4X49_17825 PF00199 Catalase C4X49_17830 PF02580 D-Tyr-tRNA(Tyr) deacylase C4X49_17860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4X49_17860 PF00925 GTP cyclohydrolase II C4X49_17865 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4X49_17870 PF01029 NusB family C4X49_17875 PF02769 AIR synthase related protein, C-terminal domain C4X49_17875 PF00586 AIR synthase related protein, N-terminal domain C4X49_17880 PF04608 Phosphatidylglycerophosphatase A C4X49_17885 PF00132 Bacterial transferase hexapeptide (six repeats) C4X49_17885 PF14602 Hexapeptide repeat of succinyl-transferase C4X49_17885 PF12804 MobA-like NTP transferase domain C4X49_17890 PF01380 SIS domain C4X49_17895 PF01177 Asp/Glu/Hydantoin racemase C4X49_17900 PF13419 Haloacid dehalogenase-like hydrolase C4X49_17910 PF00491 Arginase family C4X49_17915 PF01979 Amidohydrolase family C4X49_17920 PF00324 Amino acid permease C4X49_17925 PF00221 Aromatic amino acid lyase C4X49_17930 PF17391 Urocanase N-terminal domain C4X49_17930 PF01175 Urocanase Rossmann-like domain C4X49_17930 PF17392 Urocanase C-terminal domain C4X49_17935 PF05962 HutD C4X49_17940 PF07702 UTRA domain C4X49_17940 PF00392 Bacterial regulatory proteins, gntR family C4X49_17950 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4X49_17950 PF07683 Cobalamin synthesis protein cobW C-terminal domain C4X49_17960 PF00324 Amino acid permease C4X49_17970 PF02798 Glutathione S-transferase, N-terminal domain C4X49_17970 PF14497 Glutathione S-transferase, C-terminal domain C4X49_17975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4X49_17985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4X49_17990 PF04463 Protein of unknown function (DUF523) C4X49_17995 PF01554 MatE C4X49_18000 PF01758 Sodium Bile acid symporter family C4X49_18005 PF00857 Isochorismatase family C4X49_18010 PF00701 Dihydrodipicolinate synthetase family C4X49_18020 PF01259 SAICAR synthetase C4X49_18035 PF01226 Formate/nitrite transporter C4X49_18040 PF12002 MgsA AAA+ ATPase C terminal C4X49_18040 PF16193 AAA C-terminal domain C4X49_18040 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_18050 PF03692 Putative zinc- or iron-chelating domain C4X49_18055 PF07043 Protein of unknown function (DUF1328) C4X49_18070 PF10576 Iron-sulfur binding domain of endonuclease III C4X49_18070 PF00633 Helix-hairpin-helix motif C4X49_18070 PF00730 HhH-GPD superfamily base excision DNA repair protein C4X49_18070 PF14815 NUDIX domain C4X49_18085 PF03352 Methyladenine glycosylase C4X49_18090 PF00107 Zinc-binding dehydrogenase C4X49_18090 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_18125 PF03466 LysR substrate binding domain C4X49_18150 PF07690 Major Facilitator Superfamily C4X49_18160 PF05173 Dihydrodipicolinate reductase, C-terminus C4X49_18160 PF01113 Dihydrodipicolinate reductase, N-terminus C4X49_18170 PF00684 DnaJ central domain C4X49_18170 PF01556 DnaJ C terminal domain C4X49_18170 PF00226 DnaJ domain C4X49_18180 PF00873 AcrB/AcrD/AcrF family C4X49_18185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C4X49_18190 PF00440 Bacterial regulatory proteins, tetR family C4X49_18190 PF08361 MAATS-type transcriptional repressor, C-terminal region C4X49_18195 PF00311 Phosphoenolpyruvate carboxylase C4X49_18200 PF00860 Permease family C4X49_18205 PF03466 LysR substrate binding domain C4X49_18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4X49_18220 PF00920 Dehydratase family C4X49_18225 PF00551 Formyl transferase C4X49_18225 PF02911 Formyl transferase, C-terminal domain C4X49_18230 PF01029 NusB family C4X49_18230 PF01189 16S rRNA methyltransferase RsmB/F C4X49_18240 PF00209 Sodium:neurotransmitter symporter family C4X49_18280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4X49_18285 PF07859 alpha/beta hydrolase fold C4X49_18310 PF01025 GrpE C4X49_18315 PF00012 Hsp70 protein C4X49_18340 PF13406 Transglycosylase SLT domain C4X49_18345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C4X49_18345 PF02222 ATP-grasp domain C4X49_18350 PF00731 AIR carboxylase C4X49_18365 PF02875 Mur ligase family, glutamate ligase domain C4X49_18365 PF08245 Mur ligase middle domain C4X49_18365 PF01225 Mur ligase family, catalytic domain C4X49_18375 PF00872 Transposase, Mutator family C4X49_18380 PF01569 PAP2 superfamily C4X49_18385 PF03741 Integral membrane protein TerC family C4X49_18395 PF03738 Glutathionylspermidine synthase preATP-grasp C4X49_18400 PF00355 Rieske [2Fe-2S] domain C4X49_18405 PF01979 Amidohydrolase family C4X49_18410 PF00156 Phosphoribosyl transferase domain C4X49_18420 PF13098 Thioredoxin-like domain C4X49_18420 PF10411 Disulfide bond isomerase protein N-terminus C4X49_18425 PF16916 Dimerisation domain of Zinc Transporter C4X49_18425 PF01545 Cation efflux family C4X49_18430 PF02583 Metal-sensitive transcriptional repressor C4X49_18435 PF01926 50S ribosome-binding GTPase C4X49_18435 PF12631 MnmE helical domain C4X49_18435 PF10396 GTP-binding protein TrmE N-terminus C4X49_18440 PF14849 YidC periplasmic domain C4X49_18440 PF02096 60Kd inner membrane protein C4X49_18445 PF01809 Putative membrane protein insertion efficiency factor C4X49_18450 PF00825 Ribonuclease P C4X49_18455 PF00468 Ribosomal protein L34 C4X49_18475 PF13007 Transposase C of IS166 homeodomain C4X49_18475 PF03050 Transposase IS66 family C4X49_18475 PF13005 zinc-finger binding domain of transposase IS66 C4X49_18475 PF13817 IS66 C-terminal element C4X49_18515 PF13361 UvrD-like helicase C-terminal domain C4X49_18515 PF00580 UvrD/REP helicase N-terminal domain C4X49_18525 PF00271 Helicase conserved C-terminal domain C4X49_18525 PF04851 Type III restriction enzyme, res subunit C4X49_18525 PF08463 EcoEI R protein C-terminal C4X49_18525 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C4X49_18550 PF07015 VirC1 protein C4X49_18560 PF02899 Phage integrase, N-terminal SAM-like domain C4X49_18560 PF00589 Phage integrase family C4X49_18580 PF00872 Transposase, Mutator family C4X49_18585 PF00589 Phage integrase family C4X49_18585 PF13356 Arm DNA-binding domain C4X49_18590 PF04151 Bacterial pre-peptidase C-terminal domain C4X49_18600 PF00107 Zinc-binding dehydrogenase C4X49_18600 PF16884 N-terminal domain of oxidoreductase C4X49_18605 PF00440 Bacterial regulatory proteins, tetR family C4X49_18605 PF16925 Tetracyclin repressor-like, C-terminal domain C4X49_18615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4X49_18625 PF00465 Iron-containing alcohol dehydrogenase C4X49_18640 PF00756 Putative esterase C4X49_18645 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_18645 PF00107 Zinc-binding dehydrogenase C4X49_18650 PF02583 Metal-sensitive transcriptional repressor C4X49_18660 PF01965 DJ-1/PfpI family C4X49_18660 PF12833 Helix-turn-helix domain C4X49_18665 PF00557 Metallopeptidase family M24 C4X49_18665 PF01321 Creatinase/Prolidase N-terminal domain C4X49_18670 PF08946 Osmosensory transporter coiled coil C4X49_18670 PF00083 Sugar (and other) transporter C4X49_18675 PF00892 EamA-like transporter family C4X49_18685 PF00109 Beta-ketoacyl synthase, N-terminal domain C4X49_18685 PF16197 Ketoacyl-synthetase C-terminal extension C4X49_18685 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_18685 PF08659 KR domain C4X49_18685 PF00550 Phosphopantetheine attachment site C4X49_18685 PF00698 Acyl transferase domain C4X49_18685 PF14765 Polyketide synthase dehydratase C4X49_18685 PF02801 Beta-ketoacyl synthase, C-terminal domain C4X49_18690 PF08240 Alcohol dehydrogenase GroES-like domain C4X49_18690 PF00107 Zinc-binding dehydrogenase C4X49_18700 PF00872 Transposase, Mutator family C4X49_18715 PF05973 Phage derived protein Gp49-like (DUF891) C4X49_18720 PF01381 Helix-turn-helix C4X49_18730 PF05973 Phage derived protein Gp49-like (DUF891) C4X49_18775 PF05973 Phage derived protein Gp49-like (DUF891) C4X49_18860 PF00245 Alkaline phosphatase C4X49_18870 PF02195 ParB-like nuclease domain C4X49_18870 PF17762 HTH domain found in ParB protein C4X49_18875 PF13614 AAA domain C4X49_18880 PF13737 Transposase DDE domain C4X49_18910 PF01435 Peptidase family M48 C4X49_18915 PF13180 PDZ domain C4X49_18945 PF13610 DDE domain C4X49_18955 PF13737 Transposase DDE domain C4X49_18965 PF00999 Sodium/hydrogen exchanger family C4X49_18965 PF02254 TrkA-N domain C4X49_18965 PF02080 TrkA-C domain C4X49_18970 PF00085 Thioredoxin C4X49_18995 PF07724 AAA domain (Cdc48 subfamily) C4X49_18995 PF17871 AAA lid domain C4X49_18995 PF02861 Clp amino terminal domain, pathogenicity island component C4X49_18995 PF10431 C-terminal, D2-small domain, of ClpB protein C4X49_18995 PF00004 ATPase family associated with various cellular activities (AAA) C4X49_19000 PF00011 Hsp20/alpha crystallin family C4X49_19015 PF13737 Transposase DDE domain C4X49_19080 PF02416 mttA/Hcf106 family C4X49_19085 PF02416 mttA/Hcf106 family C4X49_19090 PF00902 Sec-independent protein translocase protein (TatC) C4X49_19155 PF04650 YSIRK type signal peptide C4X49_19155 PF03373 Octapeptide repeat C4X49_19155 PF01476 LysM domain C4X49_19155 PF00746 LPXTG cell wall anchor motif C4X49_19155 PF02216 B domain C4X49_19170 PF03461 TRCF domain C4X49_19170 PF02559 CarD-like/TRCF domain C4X49_19170 PF00270 DEAD/DEAH box helicase C4X49_19170 PF00271 Helicase conserved C-terminal domain C4X49_19170 PF17757 UvrB interaction domain C4X49_19190 PF00005 ABC transporter C4X49_19190 PF09383 NIL domain