locus-tag class description FED54_00010 PF01476 LysM domain FED54_00010 PF01551 Peptidase family M23 FED54_00015 PF01975 Survival protein SurE FED54_00030 PF00768 D-alanyl-D-alanine carboxypeptidase FED54_00030 PF07943 Penicillin-binding protein 5, C-terminal domain FED54_00035 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_00040 PF13344 Haloacid dehalogenase-like hydrolase FED54_00040 PF00293 NUDIX domain FED54_00050 PF04356 Protein of unknown function (DUF489) FED54_00055 PF08328 Adenylosuccinate lyase C-terminal FED54_00055 PF00206 Lyase FED54_00070 PF08496 Peptidase family S49 N-terminal FED54_00070 PF01343 Peptidase family S49 FED54_00075 PF00005 ABC transporter FED54_00080 PF00528 Binding-protein-dependent transport system inner membrane component FED54_00085 PF00528 Binding-protein-dependent transport system inner membrane component FED54_00090 PF12849 PBP superfamily domain FED54_00095 PF00324 Amino acid permease FED54_00100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED54_00100 PF00205 Thiamine pyrophosphate enzyme, central domain FED54_00100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED54_00105 PF01037 Lrp/AsnC ligand binding domain FED54_00110 PF00171 Aldehyde dehydrogenase family FED54_00115 PF00282 Pyridoxal-dependent decarboxylase conserved domain FED54_00120 PF00202 Aminotransferase class-III FED54_00130 PF17754 MftR C-terminal domain FED54_00130 PF00440 Bacterial regulatory proteins, tetR family FED54_00140 PF00487 Fatty acid desaturase FED54_00145 PF00175 Oxidoreductase NAD-binding domain FED54_00145 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_00145 PF00970 Oxidoreductase FAD-binding domain FED54_00150 PF00440 Bacterial regulatory proteins, tetR family FED54_00160 PF12137 RNA polymerase recycling family C-terminal FED54_00160 PF18337 RapA N-terminal Tudor like domain FED54_00160 PF18339 RapA N-terminal Tudor like domain 1 FED54_00160 PF00176 SNF2 family N-terminal domain FED54_00160 PF00271 Helicase conserved C-terminal domain FED54_00165 PF00849 RNA pseudouridylate synthase FED54_00175 PF00202 Aminotransferase class-III FED54_00180 PF02581 Thiamine monophosphate synthase FED54_00190 PF09615 CRISPR-associated protein (Cas_Csy3) FED54_00195 PF09614 CRISPR-associated protein (Cas_Csy2) FED54_00200 PF09611 CRISPR-associated protein (Cas_Csy1) FED54_00210 PF01867 CRISPR associated protein Cas1 FED54_00235 PF05193 Peptidase M16 inactive domain FED54_00235 PF00675 Insulinase (Peptidase family M16) FED54_00240 PF02567 Phenazine biosynthesis-like protein FED54_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_00250 PF03466 LysR substrate binding domain FED54_00255 PF06779 Uncharacterised MFS-type transporter YbfB FED54_00275 PF00180 Isocitrate/isopropylmalate dehydrogenase FED54_00280 PF00849 RNA pseudouridylate synthase FED54_00285 PF03971 Monomeric isocitrate dehydrogenase FED54_00295 PF07943 Penicillin-binding protein 5, C-terminal domain FED54_00295 PF00768 D-alanyl-D-alanine carboxypeptidase FED54_00300 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_00305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_00310 PF00875 DNA photolyase FED54_00310 PF03441 FAD binding domain of DNA photolyase FED54_00340 PF02350 UDP-N-acetylglucosamine 2-epimerase FED54_00360 PF01207 Dihydrouridine synthase (Dus) FED54_00365 PF07759 Protein of unknown function (DUF1615) FED54_00375 PF00696 Amino acid kinase family FED54_00375 PF01472 PUA domain FED54_00380 PF01926 50S ribosome-binding GTPase FED54_00380 PF01018 GTP1/OBG FED54_00395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FED54_00395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FED54_00400 PF00892 EamA-like transporter family FED54_00410 PF12344 Ultra-violet resistance protein B FED54_00410 PF17757 UvrB interaction domain FED54_00410 PF00271 Helicase conserved C-terminal domain FED54_00410 PF04851 Type III restriction enzyme, res subunit FED54_00410 PF02151 UvrB/uvrC motif FED54_00420 PF00990 Diguanylate cyclase, GGDEF domain FED54_00420 PF17151 Periplasmic sensor domain FED54_00460 PF00106 short chain dehydrogenase FED54_00465 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FED54_00470 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FED54_00475 PF02565 Recombination protein O C terminal FED54_00475 PF11967 Recombination protein O N terminal FED54_00485 PF01926 50S ribosome-binding GTPase FED54_00485 PF07650 KH domain FED54_00490 PF00035 Double-stranded RNA binding motif FED54_00490 PF14622 Ribonuclease-III-like FED54_00500 PF10502 Signal peptidase, peptidase S26 FED54_00505 PF00679 Elongation factor G C-terminus FED54_00505 PF00009 Elongation factor Tu GTP binding domain FED54_00505 PF03144 Elongation factor Tu domain 2 FED54_00505 PF06421 GTP-binding protein LepA C-terminus FED54_00515 PF13180 PDZ domain FED54_00520 PF02910 Fumarate reductase flavoprotein C-term FED54_00520 PF00890 FAD binding domain FED54_00530 PF02223 Thymidylate kinase FED54_00535 PF02618 YceG-like family FED54_00540 PF01063 Amino-transferase class IV FED54_00555 PF00528 Binding-protein-dependent transport system inner membrane component FED54_00560 PF00528 Binding-protein-dependent transport system inner membrane component FED54_00565 PF00005 ABC transporter FED54_00565 PF12857 TOBE-like domain FED54_00570 PF03466 LysR substrate binding domain FED54_00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_00580 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_00580 PF14602 Hexapeptide repeat of succinyl-transferase FED54_00580 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FED54_00590 PF06508 Queuosine biosynthesis protein QueC FED54_00605 PF00578 AhpC/TSA family FED54_00615 PF01467 Cytidylyltransferase-like FED54_00615 PF00293 NUDIX domain FED54_00620 PF00378 Enoyl-CoA hydratase/isomerase FED54_00625 PF01784 NIF3 (NGG1p interacting factor 3) FED54_00630 PF07690 Major Facilitator Superfamily FED54_00635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FED54_00635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FED54_00635 PF02769 AIR synthase related protein, C-terminal domain FED54_00640 PF01966 HD domain FED54_00645 PF01330 RuvA N terminal domain FED54_00645 PF07499 RuvA, C-terminal domain FED54_00650 PF05496 Holliday junction DNA helicase RuvB P-loop domain FED54_00650 PF17864 RuvB AAA lid domain FED54_00650 PF05491 RuvB C-terminal winged helix domain FED54_00655 PF01546 Peptidase family M20/M25/M40 FED54_00655 PF07687 Peptidase dimerisation domain FED54_00660 PF03061 Thioesterase superfamily FED54_00665 PF01618 MotA/TolQ/ExbB proton channel family FED54_00670 PF02472 Biopolymer transport protein ExbD/TolR FED54_00680 PF07676 WD40-like Beta Propeller Repeat FED54_00680 PF04052 TolB amino-terminal domain FED54_00685 PF00691 OmpA family FED54_00695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FED54_00700 PF00588 SpoU rRNA Methylase family FED54_00700 PF08032 RNA 2'-O ribose methyltransferase substrate binding FED54_00730 PF00308 Bacterial dnaA protein FED54_00730 PF08299 Bacterial dnaA protein helix-turn-helix FED54_00730 PF11638 DnaA N-terminal domain FED54_00735 PF01594 AI-2E family transporter FED54_00740 PF00586 AIR synthase related protein, N-terminal domain FED54_00740 PF02769 AIR synthase related protein, C-terminal domain FED54_00745 PF00551 Formyl transferase FED54_00750 PF12697 Alpha/beta hydrolase family FED54_00755 PF01343 Peptidase family S49 FED54_00755 PF06965 Na+/H+ antiporter 1 FED54_00765 PF13567 Domain of unknown function (DUF4131) FED54_00765 PF00753 Metallo-beta-lactamase superfamily FED54_00765 PF03772 Competence protein FED54_00770 PF00005 ABC transporter FED54_00775 PF12704 MacB-like periplasmic core domain FED54_00775 PF02687 FtsX-like permease family FED54_00785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FED54_00795 PF00266 Aminotransferase class-V FED54_00805 PF13533 Biotin-lipoyl like FED54_00825 PF00535 Glycosyl transferase family 2 FED54_00855 PF00521 DNA gyrase/topoisomerase IV, subunit A FED54_00855 PF03989 DNA gyrase C-terminal domain, beta-propeller FED54_00860 PF00766 Electron transfer flavoprotein FAD-binding domain FED54_00860 PF01012 Electron transfer flavoprotein domain FED54_00865 PF01012 Electron transfer flavoprotein domain FED54_00870 PF02899 Phage integrase, N-terminal SAM-like domain FED54_00870 PF00589 Phage integrase family FED54_00875 PF01810 LysE type translocator FED54_00880 PF01678 Diaminopimelate epimerase FED54_00885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FED54_00885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FED54_00895 PF00324 Amino acid permease FED54_00900 PF18073 Rubredoxin metal binding domain FED54_00910 PF00152 tRNA synthetases class II (D, K and N) FED54_00915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED54_00915 PF11890 Domain of unknown function (DUF3410) FED54_00915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED54_00920 PF06803 Protein of unknown function (DUF1232) FED54_00925 PF02634 FdhD/NarQ family FED54_00930 PF00384 Molybdopterin oxidoreductase FED54_00935 PF02595 Glycerate kinase family FED54_00950 PF00881 Nitroreductase family FED54_00985 PF09857 Putative toxin of bacterial toxin-antitoxin pair FED54_01010 PF01272 Transcription elongation factor, GreA/GreB, C-term FED54_01010 PF03449 Transcription elongation factor, N-terminal FED54_01015 PF01464 Transglycosylase SLT domain FED54_01015 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_01025 PF01171 PP-loop family FED54_01035 PF01464 Transglycosylase SLT domain FED54_01040 PF01435 Peptidase family M48 FED54_01050 PF00873 AcrB/AcrD/AcrF family FED54_01055 PF03009 Glycerophosphoryl diester phosphodiesterase family FED54_01065 PF01219 Prokaryotic diacylglycerol kinase FED54_01070 PF00118 TCP-1/cpn60 chaperonin family FED54_01075 PF00166 Chaperonin 10 Kd subunit FED54_01080 PF00149 Calcineurin-like phosphoesterase FED54_01085 PF00781 Diacylglycerol kinase catalytic domain FED54_01090 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FED54_01090 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FED54_01095 PF01266 FAD dependent oxidoreductase FED54_01095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FED54_01100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED54_01100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED54_01105 PF00083 Sugar (and other) transporter FED54_01120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FED54_01120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FED54_01135 PF09423 PhoD-like phosphatase FED54_01135 PF16655 PhoD-like phosphatase, N-terminal domain FED54_01155 PF00809 Pterin binding enzyme FED54_01160 PF00004 ATPase family associated with various cellular activities (AAA) FED54_01160 PF06480 FtsH Extracellular FED54_01160 PF01434 Peptidase family M41 FED54_01160 PF17862 AAA+ lid domain FED54_01165 PF01728 FtsJ-like methyltransferase FED54_01170 PF01985 CRS1 / YhbY (CRM) domain FED54_01185 PF00117 Glutamine amidotransferase class-I FED54_01185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FED54_01190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FED54_01190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_01190 PF02142 MGS-like domain FED54_01195 PF01272 Transcription elongation factor, GreA/GreB, C-term FED54_01195 PF03449 Transcription elongation factor, N-terminal FED54_01200 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_01205 PF00582 Universal stress protein family FED54_01210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED54_01220 PF09587 Bacterial capsule synthesis protein PGA_cap FED54_01235 PF00999 Sodium/hydrogen exchanger family FED54_01240 PF04228 Putative neutral zinc metallopeptidase FED54_01245 PF05661 Protein of unknown function (DUF808) FED54_01250 PF00579 tRNA synthetases class I (W and Y) FED54_01255 PF00549 CoA-ligase FED54_01255 PF02629 CoA binding domain FED54_01260 PF00549 CoA-ligase FED54_01260 PF08442 ATP-grasp domain FED54_01265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_01265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_01270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED54_01270 PF00364 Biotin-requiring enzyme FED54_01270 PF02817 e3 binding domain FED54_01275 PF16078 2-oxoglutarate dehydrogenase N-terminus FED54_01275 PF16870 2-oxoglutarate dehydrogenase C-terminal FED54_01275 PF00676 Dehydrogenase E1 component FED54_01275 PF02779 Transketolase, pyrimidine binding domain FED54_01290 PF13085 2Fe-2S iron-sulfur cluster binding domain FED54_01295 PF00890 FAD binding domain FED54_01295 PF02910 Fumarate reductase flavoprotein C-term FED54_01300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FED54_01305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FED54_01310 PF00285 Citrate synthase, C-terminal domain FED54_01335 PF04539 Sigma-70 region 3 FED54_01335 PF04546 Sigma-70, non-essential region FED54_01335 PF03979 Sigma-70 factor, region 1.1 FED54_01335 PF00140 Sigma-70 factor, region 1.2 FED54_01335 PF04542 Sigma-70 region 2 FED54_01335 PF04545 Sigma-70, region 4 FED54_01340 PF04359 Protein of unknown function (DUF493) FED54_01345 PF03099 Biotin/lipoate A/B protein ligase family FED54_01355 PF00465 Iron-containing alcohol dehydrogenase FED54_01360 PF13520 Amino acid permease FED54_01365 PF03358 NADPH-dependent FMN reductase FED54_01370 PF01638 HxlR-like helix-turn-helix FED54_01375 PF00588 SpoU rRNA Methylase family FED54_01380 PF10414 Sirohaem synthase dimerisation region FED54_01380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED54_01380 PF14824 Sirohaem biosynthesis protein central FED54_01385 PF02403 Seryl-tRNA synthetase N-terminal domain FED54_01385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED54_01395 PF03548 Outer membrane lipoprotein carrier protein LolA FED54_01400 PF01016 Ribosomal L27 protein FED54_01405 PF00829 Ribosomal prokaryotic L21 protein FED54_01415 PF00348 Polyprenyl synthetase FED54_01425 PF01569 PAP2 superfamily FED54_01430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_01430 PF00529 HlyD membrane-fusion protein of T1SS FED54_01435 PF00873 AcrB/AcrD/AcrF family FED54_01440 PF02321 Outer membrane efflux protein FED54_01445 PF01906 Putative heavy-metal-binding FED54_01450 PF01906 Putative heavy-metal-binding FED54_01470 PF00133 tRNA synthetases class I (I, L, M and V) FED54_01470 PF10458 Valyl tRNA synthetase tRNA binding arm FED54_01470 PF08264 Anticodon-binding domain of tRNA FED54_01490 PF03466 LysR substrate binding domain FED54_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_01500 PF00909 Ammonium Transporter Family FED54_01510 PF00512 His Kinase A (phospho-acceptor) domain FED54_01510 PF08521 Two-component sensor kinase N-terminal FED54_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_01515 PF00072 Response regulator receiver domain FED54_01515 PF00486 Transcriptional regulatory protein, C terminal FED54_01520 PF00884 Sulfatase FED54_01520 PF08019 Phosphoethanolamine transferase EptA/EptB FED54_01540 PF01734 Patatin-like phospholipase FED54_01550 PF01145 SPFH domain / Band 7 family FED54_01555 PF04237 YjbR FED54_01560 PF00348 Polyprenyl synthetase FED54_01565 PF04303 PrpF protein FED54_01570 PF00324 Amino acid permease FED54_01580 PF01965 DJ-1/PfpI family FED54_01585 PF00698 Acyl transferase domain FED54_01585 PF08990 Erythronolide synthase docking FED54_01585 PF08240 Alcohol dehydrogenase GroES-like domain FED54_01585 PF16197 Ketoacyl-synthetase C-terminal extension FED54_01585 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_01585 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_01585 PF08659 KR domain FED54_01585 PF00550 Phosphopantetheine attachment site FED54_01585 PF14765 Polyketide synthase dehydratase FED54_01585 PF09277 Erythronolide synthase, docking FED54_01590 PF12833 Helix-turn-helix domain FED54_01590 PF06719 AraC-type transcriptional regulator N-terminus FED54_01595 PF02673 Bacitracin resistance protein BacA FED54_01615 PF02525 Flavodoxin-like fold FED54_01630 PF01507 Phosphoadenosine phosphosulfate reductase family FED54_01635 PF06974 Protein of unknown function (DUF1298) FED54_01635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FED54_01645 PF00575 S1 RNA binding domain FED54_01645 PF10150 Ribonuclease E/G family FED54_01650 PF02545 Maf-like protein FED54_01655 PF04093 rod shape-determining protein MreD FED54_01660 PF04085 rod shape-determining protein MreC FED54_01670 PF02686 Glu-tRNAGln amidotransferase C subunit FED54_01675 PF01425 Amidase FED54_01680 PF02637 GatB domain FED54_01680 PF02934 GatB/GatE catalytic domain FED54_01705 PF05649 Peptidase family M13 FED54_01705 PF01431 Peptidase family M13 FED54_01710 PF05992 SbmA/BacA-like family FED54_01715 PF13291 ACT domain FED54_01715 PF00291 Pyridoxal-phosphate dependent enzyme FED54_01720 PF01734 Patatin-like phospholipase FED54_01725 PF01235 Sodium:alanine symporter family FED54_01740 PF00881 Nitroreductase family FED54_01745 PF07690 Major Facilitator Superfamily FED54_01750 PF12805 FUSC-like inner membrane protein yccS FED54_01760 PF00258 Flavodoxin FED54_01760 PF00667 FAD binding domain FED54_01760 PF00175 Oxidoreductase NAD-binding domain FED54_01800 PF03734 L,D-transpeptidase catalytic domain FED54_01800 PF17969 L,D-transpeptidase C-terminal domain FED54_01805 PF04304 Protein of unknown function (DUF454) FED54_01815 PF08085 Entericidin EcnA/B family FED54_01820 PF01546 Peptidase family M20/M25/M40 FED54_01820 PF07687 Peptidase dimerisation domain FED54_01830 PF00072 Response regulator receiver domain FED54_01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_01830 PF01627 Hpt domain FED54_01830 PF01584 CheW-like domain FED54_01845 PF00072 Response regulator receiver domain FED54_01850 PF00072 Response regulator receiver domain FED54_01865 PF00873 AcrB/AcrD/AcrF family FED54_01870 PF03129 Anticodon binding domain FED54_01870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED54_01870 PF04073 Aminoacyl-tRNA editing domain FED54_01875 PF07411 Domain of unknown function (DUF1508) FED54_01880 PF08274 PhnA Zinc-Ribbon FED54_01880 PF03831 PhnA domain FED54_01895 PF01571 Aminomethyltransferase folate-binding domain FED54_01900 PF13098 Thioredoxin-like domain FED54_01900 PF10411 Disulfide bond isomerase protein N-terminus FED54_01910 PF03547 Membrane transport protein FED54_01915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_01920 PF07715 TonB-dependent Receptor Plug Domain FED54_01920 PF00593 TonB dependent receptor FED54_01925 PF02245 Methylpurine-DNA glycosylase (MPG) FED54_01930 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FED54_01930 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FED54_01930 PF06827 Zinc finger found in FPG and IleRS FED54_01945 PF01741 Large-conductance mechanosensitive channel, MscL FED54_01955 PF00860 Permease family FED54_01960 PF08468 Methyltransferase small domain N-terminal FED54_01960 PF05175 Methyltransferase small domain FED54_01965 PF00324 Amino acid permease FED54_01970 PF01139 tRNA-splicing ligase RtcB FED54_01975 PF00691 OmpA family FED54_01975 PF13505 Outer membrane protein beta-barrel domain FED54_01985 PF00108 Thiolase, N-terminal domain FED54_01985 PF02803 Thiolase, C-terminal domain FED54_01995 PF00893 Small Multidrug Resistance protein FED54_02005 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED54_02005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED54_02010 PF01011 PQQ enzyme repeat FED54_02015 PF04966 Carbohydrate-selective porin, OprB family FED54_02020 PF02515 CoA-transferase family III FED54_02025 PF02311 AraC-like ligand binding domain FED54_02025 PF12833 Helix-turn-helix domain FED54_02030 PF00108 Thiolase, N-terminal domain FED54_02030 PF02803 Thiolase, C-terminal domain FED54_02035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_02035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_02035 PF00378 Enoyl-CoA hydratase/isomerase FED54_02060 PF03006 Haemolysin-III related FED54_02065 PF07690 Major Facilitator Superfamily FED54_02065 PF00083 Sugar (and other) transporter FED54_02075 PF07517 SecA DEAD-like domain FED54_02075 PF07516 SecA Wing and Scaffold domain FED54_02075 PF01043 SecA preprotein cross-linking domain FED54_02075 PF02810 SEC-C motif FED54_02080 PF00578 AhpC/TSA family FED54_02080 PF10417 C-terminal domain of 1-Cys peroxiredoxin FED54_02085 PF00753 Metallo-beta-lactamase superfamily FED54_02100 PF02875 Mur ligase family, glutamate ligase domain FED54_02100 PF08245 Mur ligase middle domain FED54_02105 PF01039 Carboxyl transferase domain FED54_02110 PF00290 Tryptophan synthase alpha chain FED54_02135 PF00291 Pyridoxal-phosphate dependent enzyme FED54_02140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FED54_02145 PF07715 TonB-dependent Receptor Plug Domain FED54_02145 PF00593 TonB dependent receptor FED54_02150 PF01923 Cobalamin adenosyltransferase FED54_02155 PF03009 Glycerophosphoryl diester phosphodiesterase family FED54_02170 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FED54_02175 PF00486 Transcriptional regulatory protein, C terminal FED54_02175 PF00072 Response regulator receiver domain FED54_02180 PF00672 HAMP domain FED54_02180 PF00512 His Kinase A (phospho-acceptor) domain FED54_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_02190 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_02190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_02190 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_02195 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_02195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_02195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_02195 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_02200 PF06146 Phosphate-starvation-inducible E FED54_02225 PF00593 TonB dependent receptor FED54_02225 PF07715 TonB-dependent Receptor Plug Domain FED54_02235 PF00152 tRNA synthetases class II (D, K and N) FED54_02235 PF02938 GAD domain FED54_02235 PF01336 OB-fold nucleic acid binding domain FED54_02250 PF08437 Glycosyl transferase family 8 C-terminal FED54_02250 PF01501 Glycosyl transferase family 8 FED54_02255 PF09612 Bacterial protein of unknown function (HtrL_YibB) FED54_02265 PF00534 Glycosyl transferases group 1 FED54_02265 PF13439 Glycosyltransferase Family 4 FED54_02275 PF13439 Glycosyltransferase Family 4 FED54_02275 PF00534 Glycosyl transferases group 1 FED54_02280 PF01522 Polysaccharide deacetylase FED54_02290 PF01063 Amino-transferase class IV FED54_02295 PF08335 GlnD PII-uridylyltransferase FED54_02295 PF03710 Glutamate-ammonia ligase adenylyltransferase FED54_02300 PF07689 KaiB domain FED54_02300 PF00512 His Kinase A (phospho-acceptor) domain FED54_02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_02310 PF02547 Queuosine biosynthesis protein FED54_02325 PF01702 Queuine tRNA-ribosyltransferase FED54_02330 PF02699 Preprotein translocase subunit FED54_02335 PF02355 Protein export membrane protein FED54_02335 PF13721 SecD export protein N-terminal TM region FED54_02335 PF07549 SecD/SecF GG Motif FED54_02340 PF07549 SecD/SecF GG Motif FED54_02340 PF02355 Protein export membrane protein FED54_02345 PF02441 Flavoprotein FED54_02345 PF04127 DNA / pantothenate metabolism flavoprotein FED54_02350 PF04002 RadC-like JAB domain FED54_02355 PF01062 Bestrophin, RFP-TM, chloride channel FED54_02360 PF02811 PHP domain FED54_02365 PF04279 Intracellular septation protein A FED54_02370 PF03795 YCII-related domain FED54_02380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FED54_02380 PF01266 FAD dependent oxidoreductase FED54_02390 PF04461 Protein of unknown function (DUF520) FED54_02400 PF03061 Thioesterase superfamily FED54_02405 PF00085 Thioredoxin FED54_02410 PF00561 alpha/beta hydrolase fold FED54_02415 PF00753 Metallo-beta-lactamase superfamily FED54_02415 PF04273 Putative phosphatase (DUF442) FED54_02425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_02425 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_02460 PF17152 Periplasmic sensor domain FED54_02460 PF00990 Diguanylate cyclase, GGDEF domain FED54_02465 PF01389 OmpA-like transmembrane domain FED54_02465 PF00691 OmpA family FED54_02470 PF10518 TAT (twin-arginine translocation) pathway signal sequence FED54_02470 PF00149 Calcineurin-like phosphoesterase FED54_02475 PF13091 PLD-like domain FED54_02485 PF01926 50S ribosome-binding GTPase FED54_02485 PF16360 GTP-binding GTPase Middle Region FED54_02485 PF13167 GTP-binding GTPase N-terminal FED54_02505 PF00149 Calcineurin-like phosphoesterase FED54_02510 PF00398 Ribosomal RNA adenine dimethylase FED54_02515 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FED54_02520 PF00572 Ribosomal protein L13 FED54_02525 PF00380 Ribosomal protein S9/S16 FED54_02530 PF13417 Glutathione S-transferase, N-terminal domain FED54_02530 PF00043 Glutathione S-transferase, C-terminal domain FED54_02535 PF04386 Stringent starvation protein B FED54_02545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_02545 PF00364 Biotin-requiring enzyme FED54_02545 PF02785 Biotin carboxylase C-terminal domain FED54_02545 PF00289 Biotin carboxylase, N-terminal domain FED54_02555 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_02560 PF01039 Carboxyl transferase domain FED54_02575 PF17932 Tetracyclin repressor-like, C-terminal domain FED54_02575 PF00440 Bacterial regulatory proteins, tetR family FED54_02625 PF01066 CDP-alcohol phosphatidyltransferase FED54_02630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FED54_02650 PF00056 lactate/malate dehydrogenase, NAD binding domain FED54_02650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FED54_02660 PF01551 Peptidase family M23 FED54_02660 PF01464 Transglycosylase SLT domain FED54_02660 PF10145 Phage-related minor tail protein FED54_02665 PF01938 TRAM domain FED54_02665 PF00919 Uncharacterized protein family UPF0004 FED54_02665 PF04055 Radical SAM superfamily FED54_02670 PF02562 PhoH-like protein FED54_02675 PF02130 Uncharacterized protein family UPF0054 FED54_02700 PF03358 NADPH-dependent FMN reductase FED54_02705 PF03631 Virulence factor BrkB FED54_02710 PF00892 EamA-like transporter family FED54_02715 PF12833 Helix-turn-helix domain FED54_02720 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED54_02765 PF17876 Cold shock domain FED54_02765 PF08461 Ribonuclease R winged-helix domain FED54_02765 PF00773 RNB domain FED54_02765 PF00575 S1 RNA binding domain FED54_02765 PF08206 Ribonuclease B OB domain FED54_02770 PF01432 Peptidase family M3 FED54_02775 PF09526 Probable metal-binding protein (DUF2387) FED54_02805 PF03937 Flavinator of succinate dehydrogenase FED54_02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_02810 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_02815 PF00743 Flavin-binding monooxygenase-like FED54_02820 PF01196 Ribosomal protein L17 FED54_02825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FED54_02825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FED54_02825 PF01000 RNA polymerase Rpb3/RpoA insert domain FED54_02830 PF01479 S4 domain FED54_02830 PF00163 Ribosomal protein S4/S9 N-terminal domain FED54_02835 PF00411 Ribosomal protein S11 FED54_02840 PF00416 Ribosomal protein S13/S18 FED54_02845 PF00444 Ribosomal protein L36 FED54_02850 PF00344 SecY translocase FED54_02855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FED54_02860 PF00327 Ribosomal protein L30p/L7e FED54_02865 PF00333 Ribosomal protein S5, N-terminal domain FED54_02865 PF03719 Ribosomal protein S5, C-terminal domain FED54_02870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FED54_02875 PF00347 Ribosomal protein L6 FED54_02880 PF00410 Ribosomal protein S8 FED54_02885 PF00253 Ribosomal protein S14p/S29e FED54_02890 PF00673 ribosomal L5P family C-terminus FED54_02890 PF00281 Ribosomal protein L5 FED54_02895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FED54_02895 PF00467 KOW motif FED54_02900 PF00238 Ribosomal protein L14p/L23e FED54_02905 PF00366 Ribosomal protein S17 FED54_02910 PF00831 Ribosomal L29 protein FED54_02915 PF00252 Ribosomal protein L16p/L10e FED54_02920 PF00189 Ribosomal protein S3, C-terminal domain FED54_02920 PF07650 KH domain FED54_02925 PF00237 Ribosomal protein L22p/L17e FED54_02930 PF00203 Ribosomal protein S19 FED54_02935 PF03947 Ribosomal Proteins L2, C-terminal domain FED54_02935 PF00181 Ribosomal Proteins L2, RNA binding domain FED54_02940 PF00276 Ribosomal protein L23 FED54_02945 PF00573 Ribosomal protein L4/L1 family FED54_02950 PF00297 Ribosomal protein L3 FED54_02955 PF00338 Ribosomal protein S10p/S20e FED54_02960 PF00117 Glutamine amidotransferase class-I FED54_02965 PF01053 Cys/Met metabolism PLP-dependent enzyme FED54_02970 PF05872 Bacterial protein of unknown function (DUF853) FED54_02980 PF00970 Oxidoreductase FAD-binding domain FED54_02980 PF00042 Globin FED54_02980 PF00175 Oxidoreductase NAD-binding domain FED54_02985 PF02082 Transcriptional regulator FED54_02990 PF01926 50S ribosome-binding GTPase FED54_03000 PF00375 Sodium:dicarboxylate symporter family FED54_03010 PF01553 Acyltransferase FED54_03025 PF00270 DEAD/DEAH box helicase FED54_03025 PF17191 RecG wedge domain FED54_03025 PF00271 Helicase conserved C-terminal domain FED54_03030 PF00156 Phosphoribosyl transferase domain FED54_03035 PF00293 NUDIX domain FED54_03040 PF03641 Possible lysine decarboxylase FED54_03045 PF01544 CorA-like Mg2+ transporter protein FED54_03055 PF05494 MlaC protein FED54_03065 PF02405 Permease MlaE FED54_03070 PF00005 ABC transporter FED54_03075 PF03880 DbpA RNA binding domain FED54_03075 PF00271 Helicase conserved C-terminal domain FED54_03075 PF00270 DEAD/DEAH box helicase FED54_03075 PF12343 Cold shock protein DEAD box A FED54_03080 PF00459 Inositol monophosphatase family FED54_03085 PF02780 Transketolase, C-terminal domain FED54_03085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FED54_03085 PF02779 Transketolase, pyrimidine binding domain FED54_03090 PF00925 GTP cyclohydrolase II FED54_03095 PF01218 Coproporphyrinogen III oxidase FED54_03100 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FED54_03100 PF08501 Shikimate dehydrogenase substrate binding domain FED54_03100 PF01488 Shikimate / quinate 5-dehydrogenase FED54_03110 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_03110 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_03110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_03110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_03120 PF04024 PspC domain FED54_03125 PF00571 CBS domain FED54_03150 PF02091 Glycyl-tRNA synthetase alpha subunit FED54_03155 PF02092 Glycyl-tRNA synthetase beta subunit FED54_03155 PF05746 DALR anticodon binding domain FED54_03160 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FED54_03175 PF00892 EamA-like transporter family FED54_03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_03180 PF03466 LysR substrate binding domain FED54_03210 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FED54_03215 PF04996 Succinylarginine dihydrolase FED54_03220 PF00171 Aldehyde dehydrogenase family FED54_03225 PF04958 Arginine N-succinyltransferase beta subunit FED54_03230 PF00202 Aminotransferase class-III FED54_03235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED54_03235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED54_03240 PF00324 Amino acid permease FED54_03250 PF08241 Methyltransferase domain FED54_03270 PF13614 AAA domain FED54_03280 PF00080 Copper/zinc superoxide dismutase (SODC) FED54_03285 PF12805 FUSC-like inner membrane protein yccS FED54_03290 PF07690 Major Facilitator Superfamily FED54_03300 PF02525 Flavodoxin-like fold FED54_03305 PF03992 Antibiotic biosynthesis monooxygenase FED54_03315 PF02913 FAD linked oxidases, C-terminal domain FED54_03315 PF01565 FAD binding domain FED54_03320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED54_03320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED54_03325 PF00892 EamA-like transporter family FED54_03330 PF00892 EamA-like transporter family FED54_03340 PF01925 Sulfite exporter TauE/SafE FED54_03345 PF09157 Pseudouridine synthase II TruB, C-terminal FED54_03345 PF01509 TruB family pseudouridylate synthase (N terminal domain) FED54_03345 PF16198 tRNA pseudouridylate synthase B C-terminal domain FED54_03355 PF00561 alpha/beta hydrolase fold FED54_03360 PF01245 Ribosomal protein L19 FED54_03365 PF01746 tRNA (Guanine-1)-methyltransferase FED54_03370 PF05239 PRC-barrel domain FED54_03370 PF01782 RimM N-terminal domain FED54_03375 PF00886 Ribosomal protein S16 FED54_03415 PF02401 LytB protein FED54_03420 PF00625 Guanylate kinase FED54_03425 PF01192 RNA polymerase Rpb6 FED54_03435 PF13291 ACT domain FED54_03435 PF04607 Region found in RelA / SpoT proteins FED54_03435 PF02824 TGS domain FED54_03440 PF01042 Endoribonuclease L-PSP FED54_03445 PF04324 BFD-like [2Fe-2S] binding domain FED54_03450 PF00210 Ferritin-like domain FED54_03455 PF15864 Protein glycosylation ligase FED54_03455 PF04932 O-Antigen ligase FED54_03455 PF11846 Virulence factor membrane-bound polymerase, C-terminal FED54_03460 PF00114 Pilin (bacterial filament) FED54_03460 PF07963 Prokaryotic N-terminal methylation motif FED54_03470 PF04536 TPM domain FED54_03475 PF04011 LemA family FED54_03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_03485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FED54_03490 PF00310 Glutamine amidotransferases class-II FED54_03490 PF04898 Glutamate synthase central domain FED54_03490 PF01645 Conserved region in glutamate synthase FED54_03490 PF01493 GXGXG motif FED54_03500 PF01761 3-dehydroquinate synthase FED54_03505 PF01202 Shikimate kinase FED54_03510 PF11741 AMIN domain FED54_03510 PF00263 Bacterial type II and III secretion system protein FED54_03510 PF03958 Bacterial type II/III secretion system short domain FED54_03510 PF07660 Secretin and TonB N terminus short domain FED54_03535 PF00905 Penicillin binding protein transpeptidase domain FED54_03535 PF00912 Transglycosylase FED54_03535 PF17092 Penicillin-binding protein OB-like domain FED54_03540 PF13847 Methyltransferase domain FED54_03550 PF00953 Glycosyl transferase family 4 FED54_03555 PF08245 Mur ligase middle domain FED54_03555 PF02875 Mur ligase family, glutamate ligase domain FED54_03555 PF01225 Mur ligase family, catalytic domain FED54_03560 PF01225 Mur ligase family, catalytic domain FED54_03560 PF08245 Mur ligase middle domain FED54_03560 PF02875 Mur ligase family, glutamate ligase domain FED54_03565 PF00905 Penicillin binding protein transpeptidase domain FED54_03565 PF03717 Penicillin-binding Protein dimerisation domain FED54_03575 PF01795 MraW methylase family FED54_03590 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED54_03605 PF00324 Amino acid permease FED54_03635 PF01545 Cation efflux family FED54_03640 PF00873 AcrB/AcrD/AcrF family FED54_03645 PF00529 HlyD membrane-fusion protein of T1SS FED54_03645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_03665 PF04191 Phospholipid methyltransferase FED54_03690 PF00005 ABC transporter FED54_03690 PF12848 ABC transporter FED54_03700 PF00106 short chain dehydrogenase FED54_03705 PF01740 STAS domain FED54_03705 PF00916 Sulfate permease family FED54_03710 PF00575 S1 RNA binding domain FED54_03710 PF16921 Tex protein YqgF-like domain FED54_03710 PF09371 Tex-like protein N-terminal domain FED54_03710 PF17674 HHH domain FED54_03715 PF00486 Transcriptional regulatory protein, C terminal FED54_03715 PF00072 Response regulator receiver domain FED54_03720 PF00512 His Kinase A (phospho-acceptor) domain FED54_03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_03720 PF00672 HAMP domain FED54_03730 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FED54_03730 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FED54_03735 PF00583 Acetyltransferase (GNAT) family FED54_03755 PF00475 Imidazoleglycerol-phosphate dehydratase FED54_03760 PF00117 Glutamine amidotransferase class-I FED54_03775 PF00977 Histidine biosynthesis protein FED54_03780 PF00005 ABC transporter FED54_03780 PF00664 ABC transporter transmembrane region FED54_03795 PF03992 Antibiotic biosynthesis monooxygenase FED54_03810 PF01636 Phosphotransferase enzyme family FED54_03815 PF00977 Histidine biosynthesis protein FED54_03830 PF00230 Major intrinsic protein FED54_03855 PF02705 K+ potassium transporter FED54_03890 PF02525 Flavodoxin-like fold FED54_03900 PF01638 HxlR-like helix-turn-helix FED54_03930 PF01638 HxlR-like helix-turn-helix FED54_03955 PF02311 AraC-like ligand binding domain FED54_03955 PF12833 Helix-turn-helix domain FED54_03960 PF00248 Aldo/keto reductase family FED54_03980 PF03466 LysR substrate binding domain FED54_03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_03985 PF07690 Major Facilitator Superfamily FED54_04005 PF01593 Flavin containing amine oxidoreductase FED54_04010 PF05726 Pirin C-terminal cupin domain FED54_04010 PF02678 Pirin FED54_04015 PF00857 Isochorismatase family FED54_04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_04025 PF00171 Aldehyde dehydrogenase family FED54_04030 PF00202 Aminotransferase class-III FED54_04035 PF00392 Bacterial regulatory proteins, gntR family FED54_04035 PF00155 Aminotransferase class I and II FED54_04040 PF00324 Amino acid permease FED54_04050 PF03591 AzlC protein FED54_04060 PF00436 Single-strand binding protein family FED54_04065 PF07690 Major Facilitator Superfamily FED54_04075 PF08543 Phosphomethylpyrimidine kinase FED54_04075 PF03070 TENA/THI-4/PQQC family FED54_04075 PF02581 Thiamine monophosphate synthase FED54_04080 PF06942 GlpM protein FED54_04090 PF00107 Zinc-binding dehydrogenase FED54_04090 PF08240 Alcohol dehydrogenase GroES-like domain FED54_04095 PF00440 Bacterial regulatory proteins, tetR family FED54_04095 PF16925 Tetracyclin repressor-like, C-terminal domain FED54_04100 PF17760 UvrA interaction domain FED54_04100 PF17755 UvrA DNA-binding domain FED54_04105 PF00990 Diguanylate cyclase, GGDEF domain FED54_04105 PF17158 Membrane-associated sensor, integral membrane domain FED54_04115 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_04125 PF00474 Sodium:solute symporter family FED54_04130 PF04341 Protein of unknown function, DUF485 FED54_04135 PF00672 HAMP domain FED54_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_04135 PF01627 Hpt domain FED54_04135 PF00072 Response regulator receiver domain FED54_04135 PF00512 His Kinase A (phospho-acceptor) domain FED54_04145 PF00196 Bacterial regulatory proteins, luxR family FED54_04145 PF00072 Response regulator receiver domain FED54_04150 PF03358 NADPH-dependent FMN reductase FED54_04155 PF00296 Luciferase-like monooxygenase FED54_04160 PF01037 Lrp/AsnC ligand binding domain FED54_04165 PF00857 Isochorismatase family FED54_04170 PF00501 AMP-binding enzyme FED54_04170 PF13193 AMP-binding enzyme C-terminal domain FED54_04170 PF16177 Acetyl-coenzyme A synthetase N-terminus FED54_04180 PF00924 Mechanosensitive ion channel FED54_04185 PF04452 RNA methyltransferase FED54_04190 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FED54_04195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_04220 PF01368 DHH family FED54_04220 PF02272 DHHA1 domain FED54_04220 PF17768 RecJ OB domain FED54_04225 PF01243 Pyridoxamine 5'-phosphate oxidase FED54_04225 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FED54_04230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_04230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_04230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_04230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_04235 PF00478 IMP dehydrogenase / GMP reductase domain FED54_04235 PF00571 CBS domain FED54_04240 PF03692 Putative zinc- or iron-chelating domain FED54_04245 PF01613 Flavin reductase like domain FED54_04245 PF00258 Flavodoxin FED54_04250 PF00593 TonB dependent receptor FED54_04250 PF07715 TonB-dependent Receptor Plug Domain FED54_04255 PF01169 Uncharacterized protein family UPF0016 FED54_04265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED54_04265 PF00364 Biotin-requiring enzyme FED54_04265 PF02817 e3 binding domain FED54_04270 PF17831 Pyruvate dehydrogenase E1 component middle domain FED54_04270 PF00456 Transketolase, thiamine diphosphate binding domain FED54_04275 PF01551 Peptidase family M23 FED54_04285 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FED54_04290 PF12327 FtsZ family, C-terminal domain FED54_04290 PF00091 Tubulin/FtsZ family, GTPase domain FED54_04295 PF02491 SHS2 domain inserted in FTSA FED54_04300 PF08478 POTRA domain, FtsQ-type FED54_04300 PF03799 Cell division protein FtsQ FED54_04305 PF01820 D-ala D-ala ligase N-terminus FED54_04305 PF07478 D-ala D-ala ligase C-terminus FED54_04310 PF08245 Mur ligase middle domain FED54_04310 PF01225 Mur ligase family, catalytic domain FED54_04310 PF02875 Mur ligase family, glutamate ligase domain FED54_04315 PF04101 Glycosyltransferase family 28 C-terminal domain FED54_04315 PF03033 Glycosyltransferase family 28 N-terminal domain FED54_04320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FED54_04320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FED54_04335 PF00593 TonB dependent receptor FED54_04335 PF07715 TonB-dependent Receptor Plug Domain FED54_04345 PF00156 Phosphoribosyl transferase domain FED54_04350 PF03372 Endonuclease/Exonuclease/phosphatase family FED54_04355 PF03960 ArsC family FED54_04365 PF07859 alpha/beta hydrolase fold FED54_04370 PF07694 5TMR of 5TMR-LYT FED54_04370 PF00990 Diguanylate cyclase, GGDEF domain FED54_04375 PF11412 Disulphide bond corrector protein DsbC FED54_04375 PF02683 Cytochrome C biogenesis protein transmembrane region FED54_04405 PF00576 HIUase/Transthyretin family FED54_04410 PF00860 Permease family FED54_04420 PF01494 FAD binding domain FED54_04425 PF03561 Allantoicase repeat FED54_04430 PF04115 Ureidoglycolate lyase FED54_04435 PF00106 short chain dehydrogenase FED54_04440 PF00986 DNA gyrase B subunit, carboxyl terminus FED54_04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_04440 PF01751 Toprim domain FED54_04440 PF00204 DNA gyrase B FED54_04445 PF05728 Uncharacterised protein family (UPF0227) FED54_04495 PF01471 Putative peptidoglycan binding domain FED54_04495 PF01510 N-acetylmuramoyl-L-alanine amidase FED54_04495 PF01476 LysM domain FED54_04500 PF04717 Type VI secretion system, phage-baseplate injector FED54_04505 PF02600 Disulfide bond formation protein DsbB FED54_04510 PF04262 Glutamate-cysteine ligase FED54_04525 PF04286 Protein of unknown function (DUF445) FED54_04530 PF00155 Aminotransferase class I and II FED54_04535 PF01554 MatE FED54_04540 PF00106 short chain dehydrogenase FED54_04550 PF00486 Transcriptional regulatory protein, C terminal FED54_04550 PF00072 Response regulator receiver domain FED54_04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_04555 PF11808 Phosphate regulon sensor protein PhoR FED54_04555 PF00989 PAS fold FED54_04555 PF00512 His Kinase A (phospho-acceptor) domain FED54_04565 PF02666 Phosphatidylserine decarboxylase FED54_04570 PF00581 Rhodanese-like domain FED54_04575 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FED54_04575 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FED54_04610 PF00925 GTP cyclohydrolase II FED54_04610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FED54_04615 PF00885 6,7-dimethyl-8-ribityllumazine synthase FED54_04620 PF01029 NusB family FED54_04625 PF02769 AIR synthase related protein, C-terminal domain FED54_04625 PF00586 AIR synthase related protein, N-terminal domain FED54_04630 PF04608 Phosphatidylglycerophosphatase A FED54_04635 PF12804 MobA-like NTP transferase domain FED54_04635 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_04635 PF14602 Hexapeptide repeat of succinyl-transferase FED54_04640 PF01380 SIS domain FED54_04645 PF08722 TnsA endonuclease N terminal FED54_04645 PF08721 TnsA endonuclease C terminal FED54_04650 PF00665 Integrase core domain FED54_04655 PF13401 AAA domain FED54_04655 PF11426 Tn7 transposition regulator TnsC FED54_04660 PF15978 Tn7-like transposition protein D FED54_04660 PF06527 TniQ FED54_04685 PF00873 AcrB/AcrD/AcrF family FED54_04690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_04740 PF01177 Asp/Glu/Hydantoin racemase FED54_04745 PF13419 Haloacid dehalogenase-like hydrolase FED54_04755 PF00491 Arginase family FED54_04760 PF01979 Amidohydrolase family FED54_04765 PF00324 Amino acid permease FED54_04770 PF00221 Aromatic amino acid lyase FED54_04775 PF17391 Urocanase N-terminal domain FED54_04775 PF17392 Urocanase C-terminal domain FED54_04775 PF01175 Urocanase Rossmann-like domain FED54_04780 PF05962 HutD FED54_04795 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED54_04795 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED54_04805 PF00324 Amino acid permease FED54_04815 PF14497 Glutathione S-transferase, C-terminal domain FED54_04815 PF02798 Glutathione S-transferase, N-terminal domain FED54_04820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_04830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_04835 PF04463 Protein of unknown function (DUF523) FED54_04840 PF01554 MatE FED54_04845 PF01758 Sodium Bile acid symporter family FED54_04850 PF00857 Isochorismatase family FED54_04855 PF00701 Dihydrodipicolinate synthetase family FED54_04865 PF01259 SAICAR synthetase FED54_04875 PF01226 Formate/nitrite transporter FED54_04880 PF00004 ATPase family associated with various cellular activities (AAA) FED54_04880 PF12002 MgsA AAA+ ATPase C terminal FED54_04880 PF16193 AAA C-terminal domain FED54_04885 PF07995 Glucose / Sorbosone dehydrogenase FED54_04890 PF03692 Putative zinc- or iron-chelating domain FED54_04895 PF07043 Protein of unknown function (DUF1328) FED54_04910 PF10576 Iron-sulfur binding domain of endonuclease III FED54_04910 PF14815 NUDIX domain FED54_04910 PF00633 Helix-hairpin-helix motif FED54_04910 PF00730 HhH-GPD superfamily base excision DNA repair protein FED54_04925 PF03352 Methyladenine glycosylase FED54_04930 PF00107 Zinc-binding dehydrogenase FED54_04930 PF08240 Alcohol dehydrogenase GroES-like domain FED54_04935 PF00155 Aminotransferase class I and II FED54_04935 PF00392 Bacterial regulatory proteins, gntR family FED54_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_04950 PF03466 LysR substrate binding domain FED54_04955 PF00248 Aldo/keto reductase family FED54_04960 PF07690 Major Facilitator Superfamily FED54_04970 PF01113 Dihydrodipicolinate reductase, N-terminus FED54_04970 PF05173 Dihydrodipicolinate reductase, C-terminus FED54_04980 PF00684 DnaJ central domain FED54_04980 PF01556 DnaJ C terminal domain FED54_04980 PF00226 DnaJ domain FED54_04990 PF00873 AcrB/AcrD/AcrF family FED54_04995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_05000 PF08361 MAATS-type transcriptional repressor, C-terminal region FED54_05000 PF00440 Bacterial regulatory proteins, tetR family FED54_05005 PF00311 Phosphoenolpyruvate carboxylase FED54_05010 PF00860 Permease family FED54_05015 PF03466 LysR substrate binding domain FED54_05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_05030 PF00920 Dehydratase family FED54_05035 PF00551 Formyl transferase FED54_05035 PF02911 Formyl transferase, C-terminal domain FED54_05040 PF01029 NusB family FED54_05040 PF01189 16S rRNA methyltransferase RsmB/F FED54_05050 PF00209 Sodium:neurotransmitter symporter family FED54_05090 PF00579 tRNA synthetases class I (W and Y) FED54_05095 PF03702 Anhydro-N-acetylmuramic acid kinase FED54_05100 PF00561 alpha/beta hydrolase fold FED54_05105 PF01521 Iron-sulphur cluster biosynthesis FED54_05125 PF00005 ABC transporter FED54_05125 PF12848 ABC transporter FED54_05130 PF09335 SNARE associated Golgi protein FED54_05140 PF18053 DNA gyrase B subunit insert domain FED54_05140 PF00204 DNA gyrase B FED54_05140 PF01751 Toprim domain FED54_05140 PF00986 DNA gyrase B subunit, carboxyl terminus FED54_05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_05145 PF02463 RecF/RecN/SMC N terminal domain FED54_05150 PF00712 DNA polymerase III beta subunit, N-terminal domain FED54_05150 PF02767 DNA polymerase III beta subunit, central domain FED54_05150 PF02768 DNA polymerase III beta subunit, C-terminal domain FED54_05155 PF00308 Bacterial dnaA protein FED54_05155 PF11638 DnaA N-terminal domain FED54_05155 PF08299 Bacterial dnaA protein helix-turn-helix FED54_05160 PF00468 Ribosomal protein L34 FED54_05165 PF00825 Ribonuclease P FED54_05170 PF01809 Putative membrane protein insertion efficiency factor FED54_05175 PF14849 YidC periplasmic domain FED54_05175 PF02096 60Kd inner membrane protein FED54_05180 PF10396 GTP-binding protein TrmE N-terminus FED54_05180 PF12631 MnmE helical domain FED54_05180 PF01926 50S ribosome-binding GTPase FED54_05185 PF02583 Metal-sensitive transcriptional repressor FED54_05190 PF16916 Dimerisation domain of Zinc Transporter FED54_05190 PF01545 Cation efflux family FED54_05195 PF10411 Disulfide bond isomerase protein N-terminus FED54_05195 PF13098 Thioredoxin-like domain FED54_05205 PF00156 Phosphoribosyl transferase domain FED54_05210 PF01979 Amidohydrolase family FED54_05215 PF00355 Rieske [2Fe-2S] domain FED54_05220 PF03738 Glutathionylspermidine synthase preATP-grasp FED54_05230 PF03741 Integral membrane protein TerC family FED54_05235 PF01569 PAP2 superfamily FED54_05245 PF08245 Mur ligase middle domain FED54_05245 PF01225 Mur ligase family, catalytic domain FED54_05245 PF02875 Mur ligase family, glutamate ligase domain FED54_05260 PF00731 AIR carboxylase FED54_05265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FED54_05265 PF02222 ATP-grasp domain FED54_05270 PF13406 Transglycosylase SLT domain FED54_05290 PF00012 Hsp70 protein FED54_05295 PF01025 GrpE FED54_05320 PF07859 alpha/beta hydrolase fold FED54_05325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FED54_05365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_05370 PF01252 Signal peptidase (SPase) II FED54_05375 PF06827 Zinc finger found in FPG and IleRS FED54_05375 PF00133 tRNA synthetases class I (I, L, M and V) FED54_05375 PF08264 Anticodon-binding domain of tRNA FED54_05380 PF06574 FAD synthetase FED54_05380 PF01687 Riboflavin kinase FED54_05390 PF01048 Phosphorylase superfamily FED54_05395 PF08362 YcdC-like protein, C-terminal region FED54_05395 PF00440 Bacterial regulatory proteins, tetR family FED54_05400 PF00005 ABC transporter FED54_05405 PF00528 Binding-protein-dependent transport system inner membrane component FED54_05410 PF00296 Luciferase-like monooxygenase FED54_05415 PF09084 NMT1/THI5 like FED54_05420 PF09084 NMT1/THI5 like FED54_05425 PF00583 Acetyltransferase (GNAT) family FED54_05425 PF00696 Amino acid kinase family FED54_05440 PF00106 short chain dehydrogenase FED54_05445 PF13419 Haloacid dehalogenase-like hydrolase FED54_05455 PF01323 DSBA-like thioredoxin domain FED54_05460 PF08360 QacR-like protein, C-terminal region FED54_05460 PF00440 Bacterial regulatory proteins, tetR family FED54_05465 PF00440 Bacterial regulatory proteins, tetR family FED54_05470 PF00175 Oxidoreductase NAD-binding domain FED54_05475 PF00487 Fatty acid desaturase FED54_05480 PF01138 3' exoribonuclease family, domain 1 FED54_05480 PF03725 3' exoribonuclease family, domain 2 FED54_05485 PF04185 Phosphoesterase family FED54_05485 PF05506 Domain of unknown function (DUF756) FED54_05495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FED54_05495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FED54_05500 PF01510 N-acetylmuramoyl-L-alanine amidase FED54_05505 PF03023 Lipid II flippase MurJ FED54_05510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_05510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FED54_05515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_05515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FED54_05520 PF02706 Chain length determinant protein FED54_05520 PF13807 G-rich domain on putative tyrosine kinase FED54_05520 PF13614 AAA domain FED54_05525 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED54_05530 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FED54_05530 PF10531 SLBB domain FED54_05530 PF02563 Polysaccharide biosynthesis/export protein FED54_05535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FED54_05535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FED54_05535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FED54_05540 PF02719 Polysaccharide biosynthesis protein FED54_05545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FED54_05550 PF02350 UDP-N-acetylglucosamine 2-epimerase FED54_05555 PF03102 NeuB family FED54_05555 PF08666 SAF domain FED54_05565 PF00483 Nucleotidyl transferase FED54_05570 PF02348 Cytidylyltransferase FED54_05615 PF01370 NAD dependent epimerase/dehydratase family FED54_05620 PF02350 UDP-N-acetylglucosamine 2-epimerase FED54_05625 PF13579 Glycosyl transferase 4-like domain FED54_05630 PF01370 NAD dependent epimerase/dehydratase family FED54_05635 PF00953 Glycosyl transferase family 4 FED54_05635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FED54_05645 PF02719 Polysaccharide biosynthesis protein FED54_05650 PF00483 Nucleotidyl transferase FED54_05655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FED54_05655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FED54_05655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FED54_05660 PF00342 Phosphoglucose isomerase FED54_05665 PF16363 GDP-mannose 4,6 dehydratase FED54_05670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_05670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_05670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_05670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_05675 PF02652 L-lactate permease FED54_05680 PF00392 Bacterial regulatory proteins, gntR family FED54_05680 PF07729 FCD domain FED54_05685 PF01070 FMN-dependent dehydrogenase FED54_05690 PF09330 D-lactate dehydrogenase, membrane binding FED54_05690 PF01565 FAD binding domain FED54_05695 PF00155 Aminotransferase class I and II FED54_05700 PF00392 Bacterial regulatory proteins, gntR family FED54_05700 PF07729 FCD domain FED54_05710 PF00285 Citrate synthase, C-terminal domain FED54_05715 PF00694 Aconitase C-terminal domain FED54_05715 PF00330 Aconitase family (aconitate hydratase) FED54_05755 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_05755 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_05810 PF00849 RNA pseudouridylate synthase FED54_05825 PF07715 TonB-dependent Receptor Plug Domain FED54_05825 PF00593 TonB dependent receptor FED54_05835 PF01037 Lrp/AsnC ligand binding domain FED54_05840 PF01266 FAD dependent oxidoreductase FED54_05845 PF00842 Alanine racemase, C-terminal domain FED54_05845 PF01168 Alanine racemase, N-terminal domain FED54_05850 PF01042 Endoribonuclease L-PSP FED54_05855 PF00324 Amino acid permease FED54_05860 PF00324 Amino acid permease FED54_05870 PF00171 Aldehyde dehydrogenase family FED54_05875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED54_05875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED54_05880 PF13193 AMP-binding enzyme C-terminal domain FED54_05880 PF00501 AMP-binding enzyme FED54_05885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_05885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_05885 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_05890 PF00378 Enoyl-CoA hydratase/isomerase FED54_05895 PF00378 Enoyl-CoA hydratase/isomerase FED54_05900 PF07690 Major Facilitator Superfamily FED54_05900 PF00083 Sugar (and other) transporter FED54_05905 PF00765 Autoinducer synthase FED54_05915 PF00196 Bacterial regulatory proteins, luxR family FED54_05915 PF03472 Autoinducer binding domain FED54_05920 PF00501 AMP-binding enzyme FED54_05925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_05925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_05925 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_05930 PF08242 Methyltransferase domain FED54_05930 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_05930 PF00550 Phosphopantetheine attachment site FED54_05930 PF16197 Ketoacyl-synthetase C-terminal extension FED54_05930 PF14765 Polyketide synthase dehydratase FED54_05930 PF00975 Thioesterase domain FED54_05930 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_05950 PF16363 GDP-mannose 4,6 dehydratase FED54_05955 PF01648 4'-phosphopantetheinyl transferase superfamily FED54_05970 PF01722 BolA-like protein FED54_05980 PF13614 AAA domain FED54_05995 PF09335 SNARE associated Golgi protein FED54_06000 PF07681 DoxX FED54_06005 PF04286 Protein of unknown function (DUF445) FED54_06010 PF02540 NAD synthase FED54_06010 PF00117 Glutamine amidotransferase class-I FED54_06010 PF00958 GMP synthase C terminal domain FED54_06015 PF13427 Domain of unknown function (DUF4111) FED54_06015 PF01909 Nucleotidyltransferase domain FED54_06020 PF03551 Transcriptional regulator PadR-like family FED54_06030 PF05726 Pirin C-terminal cupin domain FED54_06030 PF02678 Pirin FED54_06050 PF00750 tRNA synthetases class I (R) FED54_06050 PF05746 DALR anticodon binding domain FED54_06050 PF03485 Arginyl tRNA synthetase N terminal domain FED54_06055 PF03949 Malic enzyme, NAD binding domain FED54_06055 PF00390 Malic enzyme, N-terminal domain FED54_06060 PF04261 Dyp-type peroxidase family FED54_06065 PF01810 LysE type translocator FED54_06070 PF00950 ABC 3 transport family FED54_06075 PF00005 ABC transporter FED54_06095 PF00119 ATP synthase A chain FED54_06100 PF00137 ATP synthase subunit C FED54_06105 PF00430 ATP synthase B/B' CF(0) FED54_06110 PF00213 ATP synthase delta (OSCP) subunit FED54_06115 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED54_06115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED54_06115 PF00306 ATP synthase alpha/beta chain, C terminal domain FED54_06120 PF00231 ATP synthase FED54_06125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED54_06125 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED54_06130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FED54_06140 PF00255 Glutathione peroxidase FED54_06150 PF07690 Major Facilitator Superfamily FED54_06155 PF00440 Bacterial regulatory proteins, tetR family FED54_06160 PF00892 EamA-like transporter family FED54_06165 PF01300 Telomere recombination FED54_06170 PF02481 DNA recombination-mediator protein A FED54_06170 PF17782 DprA winged helix domain FED54_06180 PF01327 Polypeptide deformylase FED54_06205 PF00440 Bacterial regulatory proteins, tetR family FED54_06240 PF00291 Pyridoxal-phosphate dependent enzyme FED54_06250 PF03358 NADPH-dependent FMN reductase FED54_06270 PF04055 Radical SAM superfamily FED54_06270 PF11842 Domain of unknown function (DUF3362) FED54_06270 PF08497 Radical SAM N-terminal FED54_06290 PF06123 Inner membrane protein CreD FED54_06295 PF00512 His Kinase A (phospho-acceptor) domain FED54_06295 PF00672 HAMP domain FED54_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_06300 PF00486 Transcriptional regulatory protein, C terminal FED54_06300 PF00072 Response regulator receiver domain FED54_06305 PF11799 impB/mucB/samB family C-terminal domain FED54_06305 PF11798 IMS family HHH motif FED54_06305 PF00817 impB/mucB/samB family FED54_06315 PF07690 Major Facilitator Superfamily FED54_06320 PF03641 Possible lysine decarboxylase FED54_06325 PF03471 Transporter associated domain FED54_06325 PF03741 Integral membrane protein TerC family FED54_06330 PF02810 SEC-C motif FED54_06335 PF03458 UPF0126 domain FED54_06340 PF07690 Major Facilitator Superfamily FED54_06345 PF03989 DNA gyrase C-terminal domain, beta-propeller FED54_06345 PF00521 DNA gyrase/topoisomerase IV, subunit A FED54_06350 PF00501 AMP-binding enzyme FED54_06350 PF13193 AMP-binding enzyme C-terminal domain FED54_06365 PF00719 Inorganic pyrophosphatase FED54_06370 PF03573 outer membrane porin, OprD family FED54_06380 PF00701 Dihydrodipicolinate synthetase family FED54_06390 PF00392 Bacterial regulatory proteins, gntR family FED54_06390 PF00155 Aminotransferase class I and II FED54_06395 PF13335 Magnesium chelatase, subunit ChlI C-terminal FED54_06395 PF01078 Magnesium chelatase, subunit ChlI FED54_06405 PF00665 Integrase core domain FED54_06480 PF13335 Magnesium chelatase, subunit ChlI C-terminal FED54_06480 PF01078 Magnesium chelatase, subunit ChlI FED54_06490 PF00543 Nitrogen regulatory protein P-II FED54_06495 PF00909 Ammonium Transporter Family FED54_06500 PF03477 ATP cone domain FED54_06505 PF01872 RibD C-terminal domain FED54_06505 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED54_06515 PF00677 Lumazine binding domain FED54_06535 PF02789 Cytosol aminopeptidase family, N-terminal domain FED54_06535 PF00883 Cytosol aminopeptidase family, catalytic domain FED54_06545 PF03739 Lipopolysaccharide export system permease LptF/LptG FED54_06550 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FED54_06550 PF01676 Metalloenzyme superfamily FED54_06555 PF03572 Peptidase family S41 FED54_06555 PF00595 PDZ domain FED54_06560 PF00158 Sigma-54 interaction domain FED54_06560 PF02954 Bacterial regulatory protein, Fis family FED54_06560 PF00072 Response regulator receiver domain FED54_06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_06565 PF00512 His Kinase A (phospho-acceptor) domain FED54_06570 PF00196 Bacterial regulatory proteins, luxR family FED54_06570 PF00072 Response regulator receiver domain FED54_06575 PF00768 D-alanyl-D-alanine carboxypeptidase FED54_06580 PF00291 Pyridoxal-phosphate dependent enzyme FED54_06585 PF01842 ACT domain FED54_06585 PF00742 Homoserine dehydrogenase FED54_06585 PF03447 Homoserine dehydrogenase, NAD binding domain FED54_06590 PF10411 Disulfide bond isomerase protein N-terminus FED54_06590 PF13098 Thioredoxin-like domain FED54_06595 PF00589 Phage integrase family FED54_06595 PF02899 Phage integrase, N-terminal SAM-like domain FED54_06605 PF07670 Nucleoside recognition FED54_06605 PF02421 Ferrous iron transport protein B FED54_06605 PF07664 Ferrous iron transport protein B C terminus FED54_06615 PF08245 Mur ligase middle domain FED54_06615 PF02875 Mur ligase family, glutamate ligase domain FED54_06620 PF01098 Cell cycle protein FED54_06625 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED54_06630 PF01258 Prokaryotic dksA/traR C4-type zinc finger FED54_06635 PF00149 Calcineurin-like phosphoesterase FED54_06640 PF00293 NUDIX domain FED54_06645 PF01964 Radical SAM ThiC family FED54_06645 PF13667 ThiC-associated domain FED54_06660 PF00892 EamA-like transporter family FED54_06665 PF02321 Outer membrane efflux protein FED54_06670 PF01895 PhoU domain FED54_06675 PF04362 Bacterial Fe(2+) trafficking FED54_06680 PF00206 Lyase FED54_06680 PF14698 Argininosuccinate lyase C-terminal FED54_06685 PF07694 5TMR of 5TMR-LYT FED54_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_06685 PF06580 Histidine kinase FED54_06690 PF04397 LytTr DNA-binding domain FED54_06690 PF00072 Response regulator receiver domain FED54_06695 PF03900 Porphobilinogen deaminase, C-terminal domain FED54_06695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FED54_06720 PF00816 H-NS histone family FED54_06735 PF03958 Bacterial type II/III secretion system short domain FED54_06735 PF00263 Bacterial type II and III secretion system protein FED54_06740 PF00498 FHA domain FED54_06740 PF12401 Protein of unknown function (DUF2662) FED54_06745 PF13419 Haloacid dehalogenase-like hydrolase FED54_06750 PF00425 chorismate binding enzyme FED54_06750 PF04715 Anthranilate synthase component I, N terminal region FED54_06785 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FED54_06790 PF02357 Transcription termination factor nusG FED54_06790 PF00467 KOW motif FED54_06795 PF00298 Ribosomal protein L11, RNA binding domain FED54_06795 PF03946 Ribosomal protein L11, N-terminal domain FED54_06800 PF00687 Ribosomal protein L1p/L10e family FED54_06805 PF00466 Ribosomal protein L10 FED54_06810 PF00542 Ribosomal protein L7/L12 C-terminal domain FED54_06810 PF16320 Ribosomal protein L7/L12 dimerisation domain FED54_06815 PF04563 RNA polymerase beta subunit FED54_06815 PF04561 RNA polymerase Rpb2, domain 2 FED54_06815 PF04560 RNA polymerase Rpb2, domain 7 FED54_06815 PF00562 RNA polymerase Rpb2, domain 6 FED54_06815 PF10385 RNA polymerase beta subunit external 1 domain FED54_06815 PF04565 RNA polymerase Rpb2, domain 3 FED54_06820 PF05000 RNA polymerase Rpb1, domain 4 FED54_06820 PF04983 RNA polymerase Rpb1, domain 3 FED54_06820 PF00623 RNA polymerase Rpb1, domain 2 FED54_06820 PF04997 RNA polymerase Rpb1, domain 1 FED54_06820 PF04998 RNA polymerase Rpb1, domain 5 FED54_06845 PF13726 Na+-H+ antiporter family FED54_06845 PF03553 Na+/H+ antiporter family FED54_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_06860 PF00183 Hsp90 protein FED54_06875 PF01323 DSBA-like thioredoxin domain FED54_06885 PF00376 MerR family regulatory protein FED54_06885 PF09278 MerR, DNA binding FED54_06905 PF00108 Thiolase, N-terminal domain FED54_06905 PF02803 Thiolase, C-terminal domain FED54_06910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_06910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_06910 PF00378 Enoyl-CoA hydratase/isomerase FED54_06930 PF08459 UvrC Helix-hairpin-helix N-terminal FED54_06930 PF02151 UvrB/uvrC motif FED54_06930 PF01541 GIY-YIG catalytic domain FED54_06940 PF01066 CDP-alcohol phosphatidyltransferase FED54_06945 PF02805 Metal binding domain of Ada FED54_06945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FED54_06945 PF12833 Helix-turn-helix domain FED54_06945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED54_06970 PF13533 Biotin-lipoyl like FED54_06975 PF03652 Holliday junction resolvase FED54_06980 PF02622 Uncharacterized ACR, COG1678 FED54_06985 PF02463 RecF/RecN/SMC N terminal domain FED54_06995 PF06865 Pyrimidine/purine nucleoside phosphorylase FED54_07000 PF00588 SpoU rRNA Methylase family FED54_07000 PF08032 RNA 2'-O ribose methyltransferase substrate binding FED54_07010 PF01121 Dephospho-CoA kinase FED54_07015 PF01478 Type IV leader peptidase family FED54_07015 PF06750 Bacterial Peptidase A24 N-terminal domain FED54_07020 PF00482 Type II secretion system (T2SS), protein F FED54_07025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FED54_07025 PF00437 Type II/IV secretion system protein FED54_07030 PF00121 Triosephosphate isomerase FED54_07035 PF03840 Preprotein translocase SecG subunit FED54_07055 PF02576 RimP N-terminal domain FED54_07055 PF17384 RimP C-terminal SH3 domain FED54_07060 PF00575 S1 RNA binding domain FED54_07060 PF13184 NusA-like KH domain FED54_07060 PF08529 NusA N-terminal domain FED54_07065 PF04760 Translation initiation factor IF-2, N-terminal region FED54_07065 PF08364 Bacterial translation initiation factor IF-2 associated region FED54_07065 PF00009 Elongation factor Tu GTP binding domain FED54_07065 PF11987 Translation-initiation factor 2 FED54_07070 PF02033 Ribosome-binding factor A FED54_07080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FED54_07090 PF00361 Proton-conducting membrane transporter FED54_07095 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FED54_07100 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FED54_07100 PF00361 Proton-conducting membrane transporter FED54_07100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FED54_07100 PF13244 Domain of unknown function (DUF4040) FED54_07115 PF01502 Phosphoribosyl-AMP cyclohydrolase FED54_07125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_07130 PF01494 FAD binding domain FED54_07135 PF03109 ABC1 family FED54_07145 PF01209 ubiE/COQ5 methyltransferase family FED54_07155 PF03976 Polyphosphate kinase 2 (PPK2) FED54_07165 PF17946 RecC C-terminal domain FED54_07170 PF00580 UvrD/REP helicase N-terminal domain FED54_07170 PF12705 PD-(D/E)XK nuclease superfamily FED54_07170 PF13361 UvrD-like helicase C-terminal domain FED54_07175 PF13538 UvrD-like helicase C-terminal domain FED54_07185 PF00312 Ribosomal protein S15 FED54_07190 PF00013 KH domain FED54_07190 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FED54_07190 PF01138 3' exoribonuclease family, domain 1 FED54_07190 PF03725 3' exoribonuclease family, domain 2 FED54_07190 PF00575 S1 RNA binding domain FED54_07195 PF01544 CorA-like Mg2+ transporter protein FED54_07205 PF00226 DnaJ domain FED54_07205 PF01556 DnaJ C terminal domain FED54_07215 PF01430 Hsp33 protein FED54_07220 PF02254 TrkA-N domain FED54_07220 PF00999 Sodium/hydrogen exchanger family FED54_07225 PF17764 3′ DNA-binding domain (3′BD) FED54_07225 PF00270 DEAD/DEAH box helicase FED54_07225 PF00271 Helicase conserved C-terminal domain FED54_07225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FED54_07225 PF18074 Primosomal protein N C-terminal domain FED54_07230 PF00482 Type II secretion system (T2SS), protein F FED54_07235 PF08334 Type II secretion system (T2SS), protein G FED54_07235 PF07963 Prokaryotic N-terminal methylation motif FED54_07245 PF01588 Putative tRNA binding domain FED54_07250 PF00795 Carbon-nitrogen hydrolase FED54_07255 PF03471 Transporter associated domain FED54_07255 PF00571 CBS domain FED54_07260 PF01206 Sulfurtransferase TusA FED54_07280 PF01177 Asp/Glu/Hydantoin racemase FED54_07290 PF00762 Ferrochelatase FED54_07295 PF00753 Metallo-beta-lactamase superfamily FED54_07300 PF03884 DNA gyrase inhibitor YacG FED54_07320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FED54_07335 PF01197 Ribosomal protein L31 FED54_07340 PF03109 ABC1 family FED54_07345 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_07345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_07350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_07350 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_07350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_07355 PF01554 MatE FED54_07365 PF06969 HemN C-terminal domain FED54_07365 PF04055 Radical SAM superfamily FED54_07370 PF00106 short chain dehydrogenase FED54_07375 PF03466 LysR substrate binding domain FED54_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_07395 PF00575 S1 RNA binding domain FED54_07395 PF10150 Ribonuclease E/G family FED54_07395 PF12111 Polyribonucleotide phosphorylase C terminal FED54_07405 PF01479 S4 domain FED54_07405 PF00849 RNA pseudouridylate synthase FED54_07410 PF13419 Haloacid dehalogenase-like hydrolase FED54_07415 PF13280 WYL domain FED54_07415 PF08279 HTH domain FED54_07420 PF02798 Glutathione S-transferase, N-terminal domain FED54_07430 PF03466 LysR substrate binding domain FED54_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_07435 PF12706 Beta-lactamase superfamily domain FED54_07440 PF00141 Peroxidase FED54_07445 PF01590 GAF domain FED54_07445 PF00391 PEP-utilising enzyme, mobile domain FED54_07445 PF02896 PEP-utilising enzyme, TIM barrel domain FED54_07445 PF05524 PEP-utilising enzyme, N-terminal FED54_07450 PF00293 NUDIX domain FED54_07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_07460 PF03466 LysR substrate binding domain FED54_07470 PF00330 Aconitase family (aconitate hydratase) FED54_07475 PF00694 Aconitase C-terminal domain FED54_07485 PF00180 Isocitrate/isopropylmalate dehydrogenase FED54_07500 PF01176 Translation initiation factor 1A / IF-1 FED54_07510 PF01416 tRNA pseudouridine synthase FED54_07530 PF02774 Semialdehyde dehydrogenase, dimerisation domain FED54_07530 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED54_07560 PF00905 Penicillin binding protein transpeptidase domain FED54_07575 PF00375 Sodium:dicarboxylate symporter family FED54_07585 PF03279 Bacterial lipid A biosynthesis acyltransferase FED54_07590 PF01810 LysE type translocator FED54_07610 PF00107 Zinc-binding dehydrogenase FED54_07610 PF08240 Alcohol dehydrogenase GroES-like domain FED54_07615 PF01638 HxlR-like helix-turn-helix FED54_07625 PF01751 Toprim domain FED54_07625 PF08272 Topoisomerase I zinc-ribbon-like FED54_07625 PF01396 Topoisomerase DNA binding C4 zinc finger FED54_07625 PF01131 DNA topoisomerase FED54_07640 PF13361 UvrD-like helicase C-terminal domain FED54_07640 PF00580 UvrD/REP helicase N-terminal domain FED54_07645 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FED54_07665 PF02254 TrkA-N domain FED54_07665 PF00999 Sodium/hydrogen exchanger family FED54_07670 PF00471 Ribosomal protein L33 FED54_07675 PF00830 Ribosomal L28 family FED54_07680 PF00171 Aldehyde dehydrogenase family FED54_07690 PF01842 ACT domain FED54_07690 PF00551 Formyl transferase FED54_07700 PF01618 MotA/TolQ/ExbB proton channel family FED54_07710 PF01625 Peptide methionine sulfoxide reductase FED54_07720 PF00186 Dihydrofolate reductase FED54_07725 PF00303 Thymidylate synthase FED54_07740 PF01790 Prolipoprotein diacylglyceryl transferase FED54_07760 PF00902 Sec-independent protein translocase protein (TatC) FED54_07765 PF02416 mttA/Hcf106 family FED54_07770 PF02416 mttA/Hcf106 family FED54_07780 PF01725 Ham1 family FED54_07795 PF07021 Methionine biosynthesis protein MetW FED54_07795 PF00561 alpha/beta hydrolase fold FED54_07800 PF00561 alpha/beta hydrolase fold FED54_07805 PF00682 HMGL-like FED54_07805 PF08502 LeuA allosteric (dimerisation) domain FED54_07810 PF18331 PKHD-type hydroxylase C-terminal domain FED54_07810 PF13640 2OG-Fe(II) oxygenase superfamily FED54_07815 PF00593 TonB dependent receptor FED54_07815 PF07715 TonB-dependent Receptor Plug Domain FED54_07865 PF00216 Bacterial DNA-binding protein FED54_07890 PF13401 AAA domain FED54_07890 PF01471 Putative peptidoglycan binding domain FED54_07915 PF10502 Signal peptidase, peptidase S26 FED54_07945 PF11985 Protein of unknown function (DUF3486) FED54_07950 PF03237 Terminase-like family FED54_07965 PF06074 Protein of unknown function (DUF935) FED54_07970 PF04233 Phage Mu protein F like protein FED54_07975 PF05069 Phage virion morphogenesis family FED54_07990 PF10124 Mu-like prophage major head subunit gpT FED54_08085 PF05697 Bacterial trigger factor protein (TF) FED54_08085 PF05698 Bacterial trigger factor protein (TF) C-terminus FED54_08085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_08090 PF00574 Clp protease FED54_08095 PF07724 AAA domain (Cdc48 subfamily) FED54_08095 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_08095 PF06689 ClpX C4-type zinc finger FED54_08110 PF05683 Fumarase C-terminus FED54_08110 PF05681 Fumarate hydratase (Fumerase) FED54_08115 PF07085 DRTGG domain FED54_08115 PF01515 Phosphate acetyl/butaryl transferase FED54_08120 PF00871 Acetokinase family FED54_08125 PF00920 Dehydratase family FED54_08130 PF01081 KDPG and KHG aldolase FED54_08135 PF02447 GntP family permease FED54_08140 PF01202 Shikimate kinase FED54_08145 PF00171 Aldehyde dehydrogenase family FED54_08150 PF00171 Aldehyde dehydrogenase family FED54_08155 PF00561 alpha/beta hydrolase fold FED54_08165 PF00933 Glycosyl hydrolase family 3 N terminal domain FED54_08170 PF03572 Peptidase family S41 FED54_08170 PF00595 PDZ domain FED54_08170 PF17804 Tail specific protease N-terminal domain FED54_08170 PF11818 C-terminal domain of tail specific protease (DUF3340) FED54_08175 PF13439 Glycosyltransferase Family 4 FED54_08175 PF00534 Glycosyl transferases group 1 FED54_08180 PF01569 PAP2 superfamily FED54_08185 PF04384 Iron-sulphur cluster assembly FED54_08190 PF00334 Nucleoside diphosphate kinase FED54_08195 PF04055 Radical SAM superfamily FED54_08205 PF13464 Domain of unknown function (DUF4115) FED54_08210 PF04551 GcpE protein FED54_08215 PF03129 Anticodon binding domain FED54_08215 PF13393 Histidyl-tRNA synthetase FED54_08225 PF13360 PQQ-like domain FED54_08230 PF01926 50S ribosome-binding GTPase FED54_08230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FED54_08240 PF02556 Preprotein translocase subunit SecB FED54_08245 PF00462 Glutaredoxin FED54_08255 PF03193 RsgA GTPase FED54_08260 PF00929 Exonuclease FED54_08275 PF02321 Outer membrane efflux protein FED54_08280 PF12704 MacB-like periplasmic core domain FED54_08280 PF02687 FtsX-like permease family FED54_08280 PF00005 ABC transporter FED54_08285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_08300 PF00133 tRNA synthetases class I (I, L, M and V) FED54_08300 PF09334 tRNA synthetases class I (M) FED54_08300 PF08264 Anticodon-binding domain of tRNA FED54_08300 PF13603 Leucyl-tRNA synthetase, Domain 2 FED54_08310 PF00205 Thiamine pyrophosphate enzyme, central domain FED54_08310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED54_08310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED54_08315 PF10369 Small subunit of acetolactate synthase FED54_08320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FED54_08320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FED54_08325 PF00563 EAL domain FED54_08325 PF00990 Diguanylate cyclase, GGDEF domain FED54_08325 PF03707 Bacterial signalling protein N terminal repeat FED54_08350 PF16671 Actin cross-linking domain FED54_08350 PF04717 Type VI secretion system, phage-baseplate injector FED54_08375 PF16658 Class II release factor RF3, C-terminal domain FED54_08375 PF03144 Elongation factor Tu domain 2 FED54_08375 PF00009 Elongation factor Tu GTP binding domain FED54_08390 PF01026 TatD related DNase FED54_08395 PF00694 Aconitase C-terminal domain FED54_08395 PF00330 Aconitase family (aconitate hydratase) FED54_08405 PF00899 ThiF family FED54_08415 PF03466 LysR substrate binding domain FED54_08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_08425 PF01207 Dihydrouridine synthase (Dus) FED54_08430 PF00589 Phage integrase family FED54_08525 PF00672 HAMP domain FED54_08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_08525 PF00512 His Kinase A (phospho-acceptor) domain FED54_08530 PF00072 Response regulator receiver domain FED54_08530 PF00486 Transcriptional regulatory protein, C terminal FED54_08540 PF07731 Multicopper oxidase FED54_08540 PF00394 Multicopper oxidase FED54_08540 PF07732 Multicopper oxidase FED54_08550 PF13411 MerR HTH family regulatory protein FED54_08555 PF01545 Cation efflux family FED54_08565 PF07670 Nucleoside recognition FED54_08565 PF02421 Ferrous iron transport protein B FED54_08565 PF07664 Ferrous iron transport protein B C terminus FED54_08580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_08585 PF00873 AcrB/AcrD/AcrF family FED54_08595 PF03960 ArsC family FED54_08600 PF01022 Bacterial regulatory protein, arsR family FED54_08610 PF01758 Sodium Bile acid symporter family FED54_08615 PF03358 NADPH-dependent FMN reductase FED54_08630 PF07690 Major Facilitator Superfamily FED54_08640 PF00892 EamA-like transporter family FED54_08645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FED54_08645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FED54_08650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FED54_08655 PF02233 NAD(P) transhydrogenase beta subunit FED54_08660 PF00106 short chain dehydrogenase FED54_08670 PF01261 Xylose isomerase-like TIM barrel FED54_08675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED54_08675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED54_08680 PF00378 Enoyl-CoA hydratase/isomerase FED54_08685 PF01627 Hpt domain FED54_08685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FED54_08685 PF00672 HAMP domain FED54_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_08685 PF00072 Response regulator receiver domain FED54_08685 PF00512 His Kinase A (phospho-acceptor) domain FED54_08690 PF00291 Pyridoxal-phosphate dependent enzyme FED54_08700 PF05958 tRNA (Uracil-5-)-methyltransferase FED54_08705 PF13291 ACT domain FED54_08705 PF02824 TGS domain FED54_08705 PF04607 Region found in RelA / SpoT proteins FED54_08715 PF03819 MazG nucleotide pyrophosphohydrolase domain FED54_08725 PF01743 Poly A polymerase head domain FED54_08725 PF12626 Polymerase A arginine-rich C-terminus FED54_08725 PF12627 Probable RNA and SrmB- binding site of polymerase A FED54_08730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FED54_08735 PF02548 Ketopantoate hydroxymethyltransferase FED54_08740 PF02569 Pantoate-beta-alanine ligase FED54_08745 PF03668 P-loop ATPase protein family FED54_08750 PF00381 PTS HPr component phosphorylation site FED54_08755 PF04751 Protein of unknown function (DUF615) FED54_08775 PF02824 TGS domain FED54_08775 PF03129 Anticodon binding domain FED54_08775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED54_08775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED54_08780 PF00707 Translation initiation factor IF-3, C-terminal domain FED54_08780 PF05198 Translation initiation factor IF-3, N-terminal domain FED54_08790 PF00043 Glutathione S-transferase, C-terminal domain FED54_08790 PF02798 Glutathione S-transferase, N-terminal domain FED54_08795 PF09335 SNARE associated Golgi protein FED54_08800 PF07690 Major Facilitator Superfamily FED54_08805 PF01632 Ribosomal protein L35 FED54_08810 PF00453 Ribosomal protein L20 FED54_08830 PF01409 tRNA synthetases class II core domain (F) FED54_08830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FED54_08835 PF01588 Putative tRNA binding domain FED54_08835 PF03147 Ferredoxin-fold anticodon binding domain FED54_08835 PF03484 tRNA synthetase B5 domain FED54_08835 PF03483 B3/4 domain FED54_08835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FED54_08840 PF00216 Bacterial DNA-binding protein FED54_08855 PF07497 Rho termination factor, RNA-binding domain FED54_08855 PF07498 Rho termination factor, N-terminal domain FED54_08855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED54_08860 PF00085 Thioredoxin FED54_08865 PF02541 Ppx/GppA phosphatase family FED54_08870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FED54_08875 PF11734 TilS substrate C-terminal domain FED54_08875 PF09179 TilS substrate binding domain FED54_08875 PF01171 PP-loop family FED54_08880 PF14748 Pyrroline-5-carboxylate reductase dimerisation FED54_08880 PF03807 NADP oxidoreductase coenzyme F420-dependent FED54_08885 PF02325 YGGT family FED54_08890 PF01612 3'-5' exonuclease FED54_08890 PF00476 DNA polymerase family A FED54_08890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FED54_08890 PF01367 5'-3' exonuclease, C-terminal SAM fold FED54_08910 PF00437 Type II/IV secretion system protein FED54_08915 PF02566 OsmC-like protein FED54_08920 PF01047 MarR family FED54_08930 PF00795 Carbon-nitrogen hydrolase FED54_08975 PF04963 Sigma-54 factor, core binding domain FED54_08975 PF00309 Sigma-54 factor, Activator interacting domain (AID) FED54_08975 PF04552 Sigma-54, DNA binding domain FED54_08980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FED54_08985 PF01722 BolA-like protein FED54_08990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED54_08995 PF01634 ATP phosphoribosyltransferase FED54_09000 PF00815 Histidinol dehydrogenase FED54_09005 PF00155 Aminotransferase class I and II FED54_09010 PF00425 chorismate binding enzyme FED54_09010 PF04715 Anthranilate synthase component I, N terminal region FED54_09050 PF00293 NUDIX domain FED54_09055 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_09060 PF00814 Glycoprotease family FED54_09065 PF04445 Putative SAM-dependent methyltransferase FED54_09075 PF00756 Putative esterase FED54_09085 PF00834 Ribulose-phosphate 3 epimerase family FED54_09100 PF07732 Multicopper oxidase FED54_09100 PF00394 Multicopper oxidase FED54_09100 PF07731 Multicopper oxidase FED54_09115 PF00893 Small Multidrug Resistance protein FED54_09120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FED54_09120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED54_09125 PF01960 ArgJ family FED54_09130 PF02445 Quinolinate synthetase A protein FED54_09155 PF00962 Adenosine/AMP deaminase FED54_09175 PF00107 Zinc-binding dehydrogenase FED54_09175 PF08240 Alcohol dehydrogenase GroES-like domain FED54_09180 PF03466 LysR substrate binding domain FED54_09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_09185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_09185 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_09185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_09190 PF07690 Major Facilitator Superfamily FED54_09195 PF02515 CoA-transferase family III FED54_09205 PF00890 FAD binding domain FED54_09205 PF14537 Cytochrome c3 FED54_09210 PF03466 LysR substrate binding domain FED54_09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_09220 PF07690 Major Facilitator Superfamily FED54_09230 PF03466 LysR substrate binding domain FED54_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_09240 PF07687 Peptidase dimerisation domain FED54_09240 PF01546 Peptidase family M20/M25/M40 FED54_09245 PF12833 Helix-turn-helix domain FED54_09245 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FED54_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_09260 PF03466 LysR substrate binding domain FED54_09270 PF01717 Cobalamin-independent synthase, Catalytic domain FED54_09270 PF08267 Cobalamin-independent synthase, N-terminal domain FED54_09275 PF01613 Flavin reductase like domain FED54_09285 PF16925 Tetracyclin repressor-like, C-terminal domain FED54_09285 PF00440 Bacterial regulatory proteins, tetR family FED54_09295 PF17074 Darcynin, domain of unknown function FED54_09305 PF02567 Phenazine biosynthesis-like protein FED54_09315 PF00268 Ribonucleotide reductase, small chain FED54_09325 PF00317 Ribonucleotide reductase, all-alpha domain FED54_09325 PF02867 Ribonucleotide reductase, barrel domain FED54_09325 PF03477 ATP cone domain FED54_09335 PF00072 Response regulator receiver domain FED54_09335 PF00486 Transcriptional regulatory protein, C terminal FED54_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_09340 PF00512 His Kinase A (phospho-acceptor) domain FED54_09340 PF00672 HAMP domain FED54_09350 PF17151 Periplasmic sensor domain FED54_09350 PF00990 Diguanylate cyclase, GGDEF domain FED54_09355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FED54_09360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FED54_09365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FED54_09365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FED54_09375 PF10531 SLBB domain FED54_09375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FED54_09375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FED54_09380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FED54_09380 PF00384 Molybdopterin oxidoreductase FED54_09380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FED54_09385 PF00146 NADH dehydrogenase FED54_09390 PF12838 4Fe-4S dicluster domain FED54_09395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FED54_09400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FED54_09405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FED54_09405 PF00361 Proton-conducting membrane transporter FED54_09410 PF00361 Proton-conducting membrane transporter FED54_09415 PF00361 Proton-conducting membrane transporter FED54_09425 PF00313 'Cold-shock' DNA-binding domain FED54_09430 PF03466 LysR substrate binding domain FED54_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_09435 PF00175 Oxidoreductase NAD-binding domain FED54_09435 PF00970 Oxidoreductase FAD-binding domain FED54_09450 PF05552 Conserved TM helix FED54_09465 PF00291 Pyridoxal-phosphate dependent enzyme FED54_09470 PF13533 Biotin-lipoyl like FED54_09495 PF09334 tRNA synthetases class I (M) FED54_09495 PF01588 Putative tRNA binding domain FED54_09505 PF10609 NUBPL iron-transfer P-loop NTPase FED54_09515 PF01048 Phosphorylase superfamily FED54_09530 PF00692 dUTPase FED54_09565 PF01207 Dihydrouridine synthase (Dus) FED54_09575 PF02881 SRP54-type protein, helical bundle domain FED54_09575 PF00448 SRP54-type protein, GTPase domain FED54_09575 PF02978 Signal peptide binding domain FED54_09580 PF03309 Type III pantothenate kinase FED54_09590 PF01925 Sulfite exporter TauE/SafE FED54_09600 PF02463 RecF/RecN/SMC N terminal domain FED54_09600 PF06470 SMC proteins Flexible Hinge Domain FED54_09610 PF01653 NAD-dependent DNA ligase adenylation domain FED54_09610 PF03120 NAD-dependent DNA ligase OB-fold domain FED54_09610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FED54_09610 PF12826 Helix-hairpin-helix motif FED54_09610 PF00533 BRCA1 C Terminus (BRCT) domain FED54_09615 PF00210 Ferritin-like domain FED54_09620 PF07690 Major Facilitator Superfamily FED54_09625 PF00982 Glycosyltransferase family 20 FED54_09630 PF02358 Trehalose-phosphatase FED54_09635 PF08241 Methyltransferase domain FED54_09635 PF12697 Alpha/beta hydrolase family FED54_09640 PF04055 Radical SAM superfamily FED54_09640 PF00202 Aminotransferase class-III FED54_09640 PF06968 Biotin and Thiamin Synthesis associated domain FED54_09645 PF00155 Aminotransferase class I and II FED54_09660 PF00849 RNA pseudouridylate synthase FED54_09660 PF01479 S4 domain FED54_09665 PF04079 Segregation and condensation complex subunit ScpB FED54_09670 PF02616 Segregation and condensation protein ScpA FED54_09675 PF01300 Telomere recombination FED54_09680 PF04315 Elongation factor P hydroxylase FED54_09685 PF02620 Large ribosomal RNA subunit accumulation protein YceD FED54_09690 PF01783 Ribosomal L32p protein family FED54_09695 PF00698 Acyl transferase domain FED54_09705 PF00550 Phosphopantetheine attachment site FED54_09710 PF01476 LysM domain FED54_09710 PF04972 BON domain FED54_09715 PF02581 Thiamine monophosphate synthase FED54_09715 PF08543 Phosphomethylpyrimidine kinase FED54_09715 PF03070 TENA/THI-4/PQQC family FED54_09725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FED54_09740 PF02261 Aspartate decarboxylase FED54_09745 PF01195 Peptidyl-tRNA hydrolase FED54_09750 PF01386 Ribosomal L25p family FED54_09755 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FED54_09755 PF14572 Phosphoribosyl synthetase-associated domain FED54_09780 PF00288 GHMP kinases N terminal domain FED54_09780 PF08544 GHMP kinases C terminal FED54_09785 PF03550 Outer membrane lipoprotein LolB FED54_09795 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FED54_09795 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FED54_09795 PF01488 Shikimate / quinate 5-dehydrogenase FED54_09800 PF01807 CHC2 zinc finger FED54_09800 PF08275 DNA primase catalytic core, N-terminal domain FED54_09800 PF10410 DnaB-helicase binding domain of primase FED54_09800 PF08278 DNA primase DnaG DnaB-binding FED54_09805 PF13525 Outer membrane lipoprotein FED54_09810 PF01479 S4 domain FED54_09810 PF00849 RNA pseudouridylate synthase FED54_09820 PF03358 NADPH-dependent FMN reductase FED54_09825 PF01668 SmpB protein FED54_09830 PF01467 Cytidylyltransferase-like FED54_09835 PF00037 4Fe-4S binding domain FED54_09855 PF03466 LysR substrate binding domain FED54_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_09860 PF00180 Isocitrate/isopropylmalate dehydrogenase FED54_09865 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_09870 PF07859 alpha/beta hydrolase fold FED54_09875 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_09875 PF00355 Rieske [2Fe-2S] domain FED54_09880 PF00171 Aldehyde dehydrogenase family FED54_09885 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_09885 PF00175 Oxidoreductase NAD-binding domain FED54_09885 PF00970 Oxidoreductase FAD-binding domain FED54_09900 PF00795 Carbon-nitrogen hydrolase FED54_09900 PF02540 NAD synthase FED54_09910 PF02678 Pirin FED54_09910 PF05726 Pirin C-terminal cupin domain FED54_09920 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_09920 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_09930 PF00164 Ribosomal protein S12/S23 FED54_09935 PF00177 Ribosomal protein S7p/S5e FED54_09940 PF03764 Elongation factor G, domain IV FED54_09940 PF14492 Elongation Factor G, domain II FED54_09940 PF00009 Elongation factor Tu GTP binding domain FED54_09940 PF03144 Elongation factor Tu domain 2 FED54_09940 PF00679 Elongation factor G C-terminus FED54_09945 PF03143 Elongation factor Tu C-terminal domain FED54_09945 PF03144 Elongation factor Tu domain 2 FED54_09945 PF00009 Elongation factor Tu GTP binding domain FED54_09960 PF00583 Acetyltransferase (GNAT) family FED54_09965 PF04376 Arginine-tRNA-protein transferase, N terminus FED54_09965 PF04377 Arginine-tRNA-protein transferase, C terminus FED54_09970 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FED54_09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_09980 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FED54_09980 PF09397 Ftsk gamma domain FED54_09980 PF01580 FtsK/SpoIIIE family FED54_09980 PF17854 FtsK alpha domain FED54_09985 PF01810 LysE type translocator FED54_10000 PF03776 Septum formation topological specificity factor MinE FED54_10005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FED54_10010 PF03775 Septum formation inhibitor MinC, C-terminal domain FED54_10020 PF01553 Acyltransferase FED54_10025 PF13488 Glycine zipper FED54_10025 PF00691 OmpA family FED54_10030 PF00580 UvrD/REP helicase N-terminal domain FED54_10030 PF13361 UvrD-like helicase C-terminal domain FED54_10035 PF00692 dUTPase FED54_10040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_10040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_10040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_10040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_10045 PF00696 Amino acid kinase family FED54_10055 PF13230 Glutamine amidotransferases class-II FED54_10060 PF01814 Hemerythrin HHE cation binding domain FED54_10075 PF03658 RnfH family Ubiquitin FED54_10080 PF04355 SmpA / OmlA family FED54_10085 PF01475 Ferric uptake regulator family FED54_10090 PF00437 Type II/IV secretion system protein FED54_10095 PF00437 Type II/IV secretion system protein FED54_10100 PF01168 Alanine racemase, N-terminal domain FED54_10110 PF00149 Calcineurin-like phosphoesterase FED54_10110 PF12320 Type 5 capsule protein repressor C-terminal domain FED54_10135 PF08338 Domain of unknown function (DUF1731) FED54_10135 PF01370 NAD dependent epimerase/dehydratase family FED54_10140 PF01266 FAD dependent oxidoreductase FED54_10145 PF00490 Delta-aminolevulinic acid dehydratase FED54_10150 PF03061 Thioesterase superfamily FED54_10155 PF13533 Biotin-lipoyl like FED54_10160 PF07690 Major Facilitator Superfamily FED54_10220 PF02384 N-6 DNA Methylase FED54_10220 PF12161 HsdM N-terminal domain FED54_10230 PF04851 Type III restriction enzyme, res subunit FED54_10230 PF08463 EcoEI R protein C-terminal FED54_10230 PF00271 Helicase conserved C-terminal domain FED54_10230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FED54_10240 PF00083 Sugar (and other) transporter FED54_10245 PF00701 Dihydrodipicolinate synthetase family FED54_10255 PF04542 Sigma-70 region 2 FED54_10255 PF08281 Sigma-70, region 4 FED54_10265 PF00593 TonB dependent receptor FED54_10265 PF07715 TonB-dependent Receptor Plug Domain FED54_10285 PF01126 Heme oxygenase FED54_10310 PF13520 Amino acid permease FED54_10315 PF02574 Homocysteine S-methyltransferase FED54_10325 PF06039 Malate:quinone oxidoreductase (Mqo) FED54_10330 PF05199 GMC oxidoreductase FED54_10330 PF00732 GMC oxidoreductase FED54_10335 PF00171 Aldehyde dehydrogenase family FED54_10340 PF13977 BetI-type transcriptional repressor, C-terminal FED54_10340 PF00440 Bacterial regulatory proteins, tetR family FED54_10345 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_10350 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_10360 PF03061 Thioesterase superfamily FED54_10370 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED54_10370 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED54_10375 PF00375 Sodium:dicarboxylate symporter family FED54_10380 PF07152 YaeQ protein FED54_10385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_10390 PF01522 Polysaccharide deacetylase FED54_10390 PF14883 Hypothetical glycosyl hydrolase family 13 FED54_10395 PF00535 Glycosyl transferase family 2 FED54_10405 PF00378 Enoyl-CoA hydratase/isomerase FED54_10420 PF09339 IclR helix-turn-helix domain FED54_10420 PF01614 Bacterial transcriptional regulator FED54_10425 PF00355 Rieske [2Fe-2S] domain FED54_10435 PF00355 Rieske [2Fe-2S] domain FED54_10445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_10450 PF14759 Reductase C-terminal FED54_10455 PF07690 Major Facilitator Superfamily FED54_10465 PF12697 Alpha/beta hydrolase family FED54_10475 PF01958 Domain of unknown function DUF108 FED54_10475 PF03447 Homoserine dehydrogenase, NAD binding domain FED54_10480 PF00171 Aldehyde dehydrogenase family FED54_10485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED54_10485 PF00205 Thiamine pyrophosphate enzyme, central domain FED54_10485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED54_10495 PF07690 Major Facilitator Superfamily FED54_10500 PF01327 Polypeptide deformylase FED54_10505 PF04960 Glutaminase FED54_10510 PF12833 Helix-turn-helix domain FED54_10510 PF02311 AraC-like ligand binding domain FED54_10515 PF07690 Major Facilitator Superfamily FED54_10520 PF01263 Aldose 1-epimerase FED54_10535 PF03466 LysR substrate binding domain FED54_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_10545 PF07690 Major Facilitator Superfamily FED54_10550 PF00456 Transketolase, thiamine diphosphate binding domain FED54_10555 PF02779 Transketolase, pyrimidine binding domain FED54_10555 PF02780 Transketolase, C-terminal domain FED54_10560 PF02607 B12 binding domain FED54_10560 PF02574 Homocysteine S-methyltransferase FED54_10560 PF02310 B12 binding domain FED54_10560 PF02965 Vitamin B12 dependent methionine synthase, activation domain FED54_10560 PF00809 Pterin binding enzyme FED54_10565 PF01384 Phosphate transporter family FED54_10570 PF00291 Pyridoxal-phosphate dependent enzyme FED54_10585 PF03781 Sulfatase-modifying factor enzyme 1 FED54_10590 PF00884 Sulfatase FED54_10600 PF01521 Iron-sulphur cluster biosynthesis FED54_10600 PF01106 NifU-like domain FED54_10605 PF00593 TonB dependent receptor FED54_10605 PF07715 TonB-dependent Receptor Plug Domain FED54_10615 PF00561 alpha/beta hydrolase fold FED54_10620 PF00484 Carbonic anhydrase FED54_10625 PF13472 GDSL-like Lipase/Acylhydrolase family FED54_10630 PF00005 ABC transporter FED54_10640 PF01694 Rhomboid family FED54_10645 PF00912 Transglycosylase FED54_10650 PF02503 Polyphosphate kinase middle domain FED54_10650 PF13090 Polyphosphate kinase C-terminal domain 2 FED54_10650 PF13089 Polyphosphate kinase N-terminal domain FED54_10650 PF17941 Polyphosphate kinase C-terminal domain 1 FED54_10665 PF03466 LysR substrate binding domain FED54_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_10670 PF00561 alpha/beta hydrolase fold FED54_10675 PF18113 Rubredoxin binding C-terminal domain FED54_10675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_10680 PF00301 Rubredoxin FED54_10695 PF01336 OB-fold nucleic acid binding domain FED54_10695 PF00152 tRNA synthetases class II (D, K and N) FED54_10700 PF14052 Capsule assembly protein Wzi FED54_10710 PF01507 Phosphoadenosine phosphosulfate reductase family FED54_10715 PF00009 Elongation factor Tu GTP binding domain FED54_10730 PF03600 Citrate transporter FED54_10740 PF01595 Cyclin M transmembrane N-terminal domain FED54_10740 PF03471 Transporter associated domain FED54_10740 PF00571 CBS domain FED54_10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_10745 PF03466 LysR substrate binding domain FED54_10750 PF00463 Isocitrate lyase family FED54_10765 PF01774 UreD urease accessory protein FED54_10770 PF00547 Urease, gamma subunit FED54_10775 PF00699 Urease beta subunit FED54_10780 PF00449 Urease alpha-subunit, N-terminal domain FED54_10780 PF01979 Amidohydrolase family FED54_10785 PF05194 UreE urease accessory protein, C-terminal domain FED54_10785 PF02814 UreE urease accessory protein, N-terminal domain FED54_10790 PF01730 UreF FED54_10795 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED54_10810 PF00905 Penicillin binding protein transpeptidase domain FED54_10810 PF03717 Penicillin-binding Protein dimerisation domain FED54_10825 PF05191 Adenylate kinase, active site lid FED54_10835 PF10576 Iron-sulfur binding domain of endonuclease III FED54_10835 PF00730 HhH-GPD superfamily base excision DNA repair protein FED54_10835 PF00633 Helix-hairpin-helix motif FED54_10840 PF04060 Putative Fe-S cluster FED54_10845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED54_10845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED54_10855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FED54_10860 PF02590 Predicted SPOUT methyltransferase FED54_10865 PF02190 ATP-dependent protease La (LON) substrate-binding domain FED54_10865 PF05362 Lon protease (S16) C-terminal proteolytic domain FED54_10865 PF00004 ATPase family associated with various cellular activities (AAA) FED54_10875 PF01812 5-formyltetrahydrofolate cyclo-ligase family FED54_10915 PF00557 Metallopeptidase family M24 FED54_10915 PF05195 Aminopeptidase P, N-terminal domain FED54_10920 PF01494 FAD binding domain FED54_10925 PF01494 FAD binding domain FED54_10935 PF13411 MerR HTH family regulatory protein FED54_10945 PF01810 LysE type translocator FED54_10950 PF03466 LysR substrate binding domain FED54_10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_10960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED54_10965 PF02021 Uncharacterised protein family UPF0102 FED54_10970 PF04972 BON domain FED54_10980 PF09297 NADH pyrophosphatase zinc ribbon domain FED54_10980 PF00293 NUDIX domain FED54_10990 PF00929 Exonuclease FED54_10995 PF01464 Transglycosylase SLT domain FED54_10995 PF01464 Transglycosylase SLT domain FED54_10995 PF01476 LysM domain FED54_10995 PF01476 LysM domain FED54_11000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_11005 PF00528 Binding-protein-dependent transport system inner membrane component FED54_11010 PF00528 Binding-protein-dependent transport system inner membrane component FED54_11010 PF12911 N-terminal TM domain of oligopeptide transport permease C FED54_11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED54_11015 PF00005 ABC transporter FED54_11020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_11020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_11035 PF00593 TonB dependent receptor FED54_11035 PF07715 TonB-dependent Receptor Plug Domain FED54_11045 PF00929 Exonuclease FED54_11050 PF01979 Amidohydrolase family FED54_11055 PF00563 EAL domain FED54_11055 PF01590 GAF domain FED54_11055 PF00990 Diguanylate cyclase, GGDEF domain FED54_11055 PF00360 Phytochrome region FED54_11060 PF00764 Arginosuccinate synthase FED54_11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_11070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_11080 PF03180 NLPA lipoprotein FED54_11095 PF00884 Sulfatase FED54_11100 PF03781 Sulfatase-modifying factor enzyme 1 FED54_11110 PF03466 LysR substrate binding domain FED54_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_11115 PF07690 Major Facilitator Superfamily FED54_11130 PF00171 Aldehyde dehydrogenase family FED54_11135 PF00465 Iron-containing alcohol dehydrogenase FED54_11140 PF04444 Catechol dioxygenase N terminus FED54_11140 PF00775 Dioxygenase FED54_11155 PF01144 Coenzyme A transferase FED54_11160 PF01144 Coenzyme A transferase FED54_11165 PF02803 Thiolase, C-terminal domain FED54_11165 PF00108 Thiolase, N-terminal domain FED54_11180 PF03783 Curli production assembly/transport component CsgG FED54_11190 PF05643 Putative bacterial lipoprotein (DUF799) FED54_11200 PF00324 Amino acid permease FED54_11205 PF01266 FAD dependent oxidoreductase FED54_11210 PF00324 Amino acid permease FED54_11220 PF00392 Bacterial regulatory proteins, gntR family FED54_11220 PF07729 FCD domain FED54_11230 PF00171 Aldehyde dehydrogenase family FED54_11240 PF00202 Aminotransferase class-III FED54_11245 PF04958 Arginine N-succinyltransferase beta subunit FED54_11250 PF00324 Amino acid permease FED54_11255 PF00171 Aldehyde dehydrogenase family FED54_11260 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FED54_11260 PF12833 Helix-turn-helix domain FED54_11265 PF00892 EamA-like transporter family FED54_11270 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FED54_11270 PF08666 SAF domain FED54_11275 PF07690 Major Facilitator Superfamily FED54_11280 PF13378 Enolase C-terminal domain-like FED54_11285 PF00701 Dihydrodipicolinate synthetase family FED54_11290 PF00171 Aldehyde dehydrogenase family FED54_11295 PF00392 Bacterial regulatory proteins, gntR family FED54_11295 PF07729 FCD domain FED54_11300 PF07519 Tannase and feruloyl esterase FED54_11315 PF03573 outer membrane porin, OprD family FED54_11320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_11320 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_11320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_11330 PF00171 Aldehyde dehydrogenase family FED54_11335 PF00378 Enoyl-CoA hydratase/isomerase FED54_11340 PF07690 Major Facilitator Superfamily FED54_11355 PF00175 Oxidoreductase NAD-binding domain FED54_11355 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_11360 PF00355 Rieske [2Fe-2S] domain FED54_11370 PF03781 Sulfatase-modifying factor enzyme 1 FED54_11375 PF00884 Sulfatase FED54_11380 PF07690 Major Facilitator Superfamily FED54_11385 PF03573 outer membrane porin, OprD family FED54_11390 PF05199 GMC oxidoreductase FED54_11395 PF07859 alpha/beta hydrolase fold FED54_11400 PF00106 short chain dehydrogenase FED54_11405 PF00743 Flavin-binding monooxygenase-like FED54_11410 PF12833 Helix-turn-helix domain FED54_11415 PF04072 Leucine carboxyl methyltransferase FED54_11420 PF00743 Flavin-binding monooxygenase-like FED54_11425 PF00106 short chain dehydrogenase FED54_11435 PF00440 Bacterial regulatory proteins, tetR family FED54_11435 PF17932 Tetracyclin repressor-like, C-terminal domain FED54_11440 PF17954 Quercetinase C-terminal cupin domain FED54_11440 PF02678 Pirin FED54_11450 PF00106 short chain dehydrogenase FED54_11455 PF00743 Flavin-binding monooxygenase-like FED54_11465 PF00860 Permease family FED54_11470 PF00962 Adenosine/AMP deaminase FED54_11475 PF01292 Prokaryotic cytochrome b561 FED54_11485 PF01351 Ribonuclease HII FED54_11490 PF02599 Global regulator protein family FED54_11495 PF01842 ACT domain FED54_11495 PF00696 Amino acid kinase family FED54_11495 PF13840 ACT domain FED54_11500 PF02272 DHHA1 domain FED54_11500 PF01411 tRNA synthetases class II (A) FED54_11500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED54_11505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FED54_11505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FED54_11510 PF13393 Histidyl-tRNA synthetase FED54_11515 PF00709 Adenylosuccinate synthetase FED54_11530 PF00248 Aldo/keto reductase family FED54_11535 PF00027 Cyclic nucleotide-binding domain FED54_11535 PF13545 Crp-like helix-turn-helix domain FED54_11555 PF00004 ATPase family associated with various cellular activities (AAA) FED54_11555 PF02861 Clp amino terminal domain, pathogenicity island component FED54_11555 PF17871 AAA lid domain FED54_11555 PF07724 AAA domain (Cdc48 subfamily) FED54_11555 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_11570 PF02926 THUMP domain FED54_11570 PF10672 S-adenosylmethionine-dependent methyltransferase FED54_11570 PF01170 Putative RNA methylase family UPF0020 FED54_11580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FED54_11580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FED54_11585 PF01979 Amidohydrolase family FED54_11590 PF13488 Glycine zipper FED54_11590 PF00691 OmpA family FED54_11600 PF13417 Glutathione S-transferase, N-terminal domain FED54_11600 PF00043 Glutathione S-transferase, C-terminal domain FED54_11605 PF02390 Putative methyltransferase FED54_11625 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_11625 PF13192 Thioredoxin domain FED54_11645 PF10417 C-terminal domain of 1-Cys peroxiredoxin FED54_11645 PF00578 AhpC/TSA family FED54_11650 PF04408 Helicase associated domain (HA2) FED54_11650 PF00270 DEAD/DEAH box helicase FED54_11650 PF11898 Domain of unknown function (DUF3418) FED54_11650 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FED54_11650 PF00271 Helicase conserved C-terminal domain FED54_11655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FED54_11655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FED54_11670 PF03594 Benzoate membrane transport protein FED54_11675 PF00106 short chain dehydrogenase FED54_11680 PF00175 Oxidoreductase NAD-binding domain FED54_11680 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_11680 PF00970 Oxidoreductase FAD-binding domain FED54_11685 PF00866 Ring hydroxylating beta subunit FED54_11690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_11690 PF00355 Rieske [2Fe-2S] domain FED54_11700 PF03466 LysR substrate binding domain FED54_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_11710 PF00970 Oxidoreductase FAD-binding domain FED54_11710 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_11710 PF00175 Oxidoreductase NAD-binding domain FED54_11720 PF04945 YHS domain FED54_11720 PF02332 Methane/Phenol/Toluene Hydroxylase FED54_11725 PF02406 MmoB/DmpM family FED54_11730 PF02332 Methane/Phenol/Toluene Hydroxylase FED54_11735 PF06099 Phenol hydroxylase subunit FED54_11740 PF02954 Bacterial regulatory protein, Fis family FED54_11740 PF00158 Sigma-54 interaction domain FED54_11740 PF02830 V4R domain FED54_11740 PF06505 Activator of aromatic catabolism FED54_11750 PF00403 Heavy-metal-associated domain FED54_11755 PF09278 MerR, DNA binding FED54_11755 PF00376 MerR family regulatory protein FED54_11795 PF13742 OB-fold nucleic acid binding domain FED54_11795 PF02601 Exonuclease VII, large subunit FED54_11830 PF01810 LysE type translocator FED54_11835 PF00313 'Cold-shock' DNA-binding domain FED54_11875 PF07690 Major Facilitator Superfamily FED54_11880 PF01638 HxlR-like helix-turn-helix FED54_11950 PF01555 DNA methylase FED54_11955 PF00717 Peptidase S24-like FED54_11955 PF01726 LexA DNA binding domain FED54_12050 PF06381 Protein of unknown function (DUF1073) FED54_12070 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) FED54_12210 PF00589 Phage integrase family FED54_12220 PF01406 tRNA synthetases class I (C) catalytic domain FED54_12220 PF09190 DALR domain FED54_12225 PF01380 SIS domain FED54_12225 PF00571 CBS domain FED54_12240 PF03968 OstA-like protein FED54_12245 PF00005 ABC transporter FED54_12245 PF12399 Branched-chain amino acid ATP-binding cassette transporter FED54_12250 PF02321 Outer membrane efflux protein FED54_12255 PF00005 ABC transporter FED54_12255 PF03412 Peptidase C39 family FED54_12255 PF00664 ABC transporter transmembrane region FED54_12265 PF01205 Uncharacterized protein family UPF0029 FED54_12270 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_12280 PF01596 O-methyltransferase FED54_12290 PF11953 Domain of unknown function (DUF3470) FED54_12290 PF00037 4Fe-4S binding domain FED54_12300 PF05190 MutS family domain IV FED54_12300 PF05192 MutS domain III FED54_12300 PF00488 MutS domain V FED54_12300 PF01624 MutS domain I FED54_12300 PF05188 MutS domain II FED54_12305 PF01037 Lrp/AsnC ligand binding domain FED54_12310 PF00892 EamA-like transporter family FED54_12315 PF03707 Bacterial signalling protein N terminal repeat FED54_12315 PF00990 Diguanylate cyclase, GGDEF domain FED54_12315 PF00563 EAL domain FED54_12320 PF03279 Bacterial lipid A biosynthesis acyltransferase FED54_12325 PF01544 CorA-like Mg2+ transporter protein FED54_12345 PF07690 Major Facilitator Superfamily FED54_12365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_12365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_12385 PF03466 LysR substrate binding domain FED54_12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_12390 PF01566 Natural resistance-associated macrophage protein FED54_12395 PF03746 LamB/YcsF family FED54_12400 PF07286 Protein of unknown function (DUF1445) FED54_12410 PF00289 Biotin carboxylase, N-terminal domain FED54_12410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_12410 PF02785 Biotin carboxylase C-terminal domain FED54_12410 PF00364 Biotin-requiring enzyme FED54_12415 PF00654 Voltage gated chloride channel FED54_12420 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FED54_12420 PF17287 POTRA domain FED54_12420 PF08479 POTRA domain, ShlB-type FED54_12425 PF05860 haemagglutination activity domain FED54_12425 PF04829 Pre-toxin domain with VENN motif FED54_12425 PF13332 Hemagglutinin repeat FED54_12425 PF13018 Extended Signal Peptide of Type V secretion system FED54_12440 PF00440 Bacterial regulatory proteins, tetR family FED54_12450 PF13823 Alcohol dehydrogenase GroES-associated FED54_12450 PF00107 Zinc-binding dehydrogenase FED54_12450 PF08240 Alcohol dehydrogenase GroES-like domain FED54_12465 PF02785 Biotin carboxylase C-terminal domain FED54_12465 PF00289 Biotin carboxylase, N-terminal domain FED54_12465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_12470 PF02525 Flavodoxin-like fold FED54_12475 PF01638 HxlR-like helix-turn-helix FED54_12485 PF01402 Ribbon-helix-helix protein, copG family FED54_12485 PF08753 NikR C terminal nickel binding domain FED54_12490 PF01425 Amidase FED54_12495 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_12500 PF00005 ABC transporter FED54_12610 PF00691 OmpA family FED54_12610 PF01389 OmpA-like transmembrane domain FED54_12620 PF07724 AAA domain (Cdc48 subfamily) FED54_12620 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_12620 PF00004 ATPase family associated with various cellular activities (AAA) FED54_12620 PF17871 AAA lid domain FED54_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_12650 PF03466 LysR substrate binding domain FED54_12660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED54_12665 PF07690 Major Facilitator Superfamily FED54_12680 PF02677 Epoxyqueuosine reductase QueH FED54_12690 PF00376 MerR family regulatory protein FED54_12690 PF09278 MerR, DNA binding FED54_12705 PF00701 Dihydrodipicolinate synthetase family FED54_12725 PF00392 Bacterial regulatory proteins, gntR family FED54_12730 PF05544 Proline racemase FED54_12735 PF01266 FAD dependent oxidoreductase FED54_12745 PF04324 BFD-like [2Fe-2S] binding domain FED54_12745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_12755 PF00083 Sugar (and other) transporter FED54_12760 PF00171 Aldehyde dehydrogenase family FED54_12765 PF13520 Amino acid permease FED54_12770 PF03313 Serine dehydratase alpha chain FED54_12770 PF03315 Serine dehydratase beta chain FED54_12775 PF01575 MaoC like domain FED54_12775 PF00171 Aldehyde dehydrogenase family FED54_12780 PF05138 Phenylacetic acid catabolic protein FED54_12785 PF06243 Phenylacetic acid degradation B FED54_12790 PF05138 Phenylacetic acid catabolic protein FED54_12795 PF01883 Iron-sulfur cluster assembly protein FED54_12800 PF00175 Oxidoreductase NAD-binding domain FED54_12800 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_12800 PF00970 Oxidoreductase FAD-binding domain FED54_12805 PF00378 Enoyl-CoA hydratase/isomerase FED54_12810 PF00378 Enoyl-CoA hydratase/isomerase FED54_12815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_12815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_12815 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FED54_12820 PF02803 Thiolase, C-terminal domain FED54_12820 PF00108 Thiolase, N-terminal domain FED54_12825 PF14535 AMP-binding enzyme C-terminal domain FED54_12825 PF00501 AMP-binding enzyme FED54_12830 PF08223 PaaX-like protein C-terminal domain FED54_12830 PF07848 PaaX-like protein FED54_12835 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_12840 PF03061 Thioesterase superfamily FED54_12850 PF12344 Ultra-violet resistance protein B FED54_12850 PF02151 UvrB/uvrC motif FED54_12850 PF04851 Type III restriction enzyme, res subunit FED54_12850 PF00271 Helicase conserved C-terminal domain FED54_12850 PF17757 UvrB interaction domain FED54_12870 PF12833 Helix-turn-helix domain FED54_12870 PF06719 AraC-type transcriptional regulator N-terminus FED54_12885 PF02515 CoA-transferase family III FED54_12890 PF00682 HMGL-like FED54_12895 PF07690 Major Facilitator Superfamily FED54_12900 PF00199 Catalase FED54_12905 PF01292 Prokaryotic cytochrome b561 FED54_12925 PF12697 Alpha/beta hydrolase family FED54_12930 PF01613 Flavin reductase like domain FED54_12935 PF00296 Luciferase-like monooxygenase FED54_12940 PF00171 Aldehyde dehydrogenase family FED54_12950 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED54_12960 PF00171 Aldehyde dehydrogenase family FED54_12965 PF02627 Carboxymuconolactone decarboxylase family FED54_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_12970 PF03466 LysR substrate binding domain FED54_12975 PF02525 Flavodoxin-like fold FED54_12980 PF09339 IclR helix-turn-helix domain FED54_12980 PF01614 Bacterial transcriptional regulator FED54_12985 PF01494 FAD binding domain FED54_12990 PF00392 Bacterial regulatory proteins, gntR family FED54_12990 PF07702 UTRA domain FED54_13000 PF08402 TOBE domain FED54_13000 PF00005 ABC transporter FED54_13005 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13010 PF01266 FAD dependent oxidoreductase FED54_13015 PF00266 Aminotransferase class-V FED54_13020 PF13419 Haloacid dehalogenase-like hydrolase FED54_13025 PF07690 Major Facilitator Superfamily FED54_13030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_13030 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_13030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_13035 PF02515 CoA-transferase family III FED54_13040 PF09339 IclR helix-turn-helix domain FED54_13045 PF00378 Enoyl-CoA hydratase/isomerase FED54_13050 PF03060 Nitronate monooxygenase FED54_13055 PF07690 Major Facilitator Superfamily FED54_13060 PF09339 IclR helix-turn-helix domain FED54_13065 PF00108 Thiolase, N-terminal domain FED54_13065 PF02803 Thiolase, C-terminal domain FED54_13070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_13070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_13070 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FED54_13080 PF00378 Enoyl-CoA hydratase/isomerase FED54_13085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_13085 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_13085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_13095 PF01144 Coenzyme A transferase FED54_13100 PF01144 Coenzyme A transferase FED54_13110 PF07690 Major Facilitator Superfamily FED54_13120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_13120 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_13120 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_13120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13135 PF03466 LysR substrate binding domain FED54_13140 PF00682 HMGL-like FED54_13145 PF00364 Biotin-requiring enzyme FED54_13145 PF02785 Biotin carboxylase C-terminal domain FED54_13145 PF00289 Biotin carboxylase, N-terminal domain FED54_13145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_13150 PF00378 Enoyl-CoA hydratase/isomerase FED54_13155 PF01039 Carboxyl transferase domain FED54_13160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_13160 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_13160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_13165 PF00440 Bacterial regulatory proteins, tetR family FED54_13170 PF13193 AMP-binding enzyme C-terminal domain FED54_13170 PF00501 AMP-binding enzyme FED54_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13190 PF03466 LysR substrate binding domain FED54_13220 PF02464 Competence-damaged protein FED54_13220 PF18146 Damage-inducible protein CinA KH domain FED54_13220 PF00994 Probable molybdopterin binding domain FED54_13230 PF00199 Catalase FED54_13230 PF06628 Catalase-related immune-responsive FED54_13230 PF18011 C-terminal domain found in long catalases FED54_13255 PF00717 Peptidase S24-like FED54_13265 PF13404 AsnC-type helix-turn-helix domain FED54_13265 PF01037 Lrp/AsnC ligand binding domain FED54_13275 PF00072 Response regulator receiver domain FED54_13275 PF09308 LuxQ, periplasmic FED54_13275 PF00512 His Kinase A (phospho-acceptor) domain FED54_13275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_13280 PF00072 Response regulator receiver domain FED54_13285 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FED54_13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13295 PF03466 LysR substrate binding domain FED54_13300 PF07690 Major Facilitator Superfamily FED54_13315 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13320 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13325 PF00005 ABC transporter FED54_13330 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_13335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13345 PF03466 LysR substrate binding domain FED54_13350 PF01810 LysE type translocator FED54_13355 PF00266 Aminotransferase class-V FED54_13365 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_13370 PF00581 Rhodanese-like domain FED54_13380 PF03466 LysR substrate binding domain FED54_13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13385 PF02798 Glutathione S-transferase, N-terminal domain FED54_13390 PF02798 Glutathione S-transferase, N-terminal domain FED54_13390 PF14834 Glutathione S-transferase, C-terminal domain FED54_13395 PF03466 LysR substrate binding domain FED54_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13400 PF03788 LrgA family FED54_13405 PF04172 LrgB-like family FED54_13410 PF00392 Bacterial regulatory proteins, gntR family FED54_13410 PF00155 Aminotransferase class I and II FED54_13430 PF00106 short chain dehydrogenase FED54_13435 PF16957 Malonate decarboxylase, alpha subunit, transporter FED54_13440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FED54_13445 PF06857 Malonate decarboxylase delta subunit (MdcD) FED54_13450 PF01039 Carboxyl transferase domain FED54_13460 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FED54_13465 PF00698 Acyl transferase domain FED54_13480 PF03466 LysR substrate binding domain FED54_13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13485 PF00155 Aminotransferase class I and II FED54_13485 PF00392 Bacterial regulatory proteins, gntR family FED54_13495 PF02322 Cytochrome bd terminal oxidase subunit II FED54_13500 PF01654 Cytochrome bd terminal oxidase subunit I FED54_13525 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_13525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_13525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_13530 PF00296 Luciferase-like monooxygenase FED54_13535 PF00083 Sugar (and other) transporter FED54_13545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FED54_13550 PF00005 ABC transporter FED54_13555 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13560 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FED54_13565 PF01177 Asp/Glu/Hydantoin racemase FED54_13570 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED54_13590 PF13382 Adenine deaminase C-terminal domain FED54_13590 PF01979 Amidohydrolase family FED54_13600 PF03960 ArsC family FED54_13605 PF01022 Bacterial regulatory protein, arsR family FED54_13610 PF01758 Sodium Bile acid symporter family FED54_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13615 PF03466 LysR substrate binding domain FED54_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_13630 PF13192 Thioredoxin domain FED54_13645 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_13650 PF00588 SpoU rRNA Methylase family FED54_13655 PF01336 OB-fold nucleic acid binding domain FED54_13655 PF07733 Bacterial DNA polymerase III alpha NTPase domain FED54_13655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FED54_13655 PF14579 Helix-hairpin-helix motif FED54_13655 PF02811 PHP domain FED54_13660 PF17763 Glutaminase/Asparaginase C-terminal domain FED54_13660 PF00710 Asparaginase, N-terminal FED54_13665 PF00375 Sodium:dicarboxylate symporter family FED54_13670 PF00155 Aminotransferase class I and II FED54_13675 PF01641 SelR domain FED54_13680 PF00255 Glutathione peroxidase FED54_13685 PF12852 Cupin FED54_13685 PF12833 Helix-turn-helix domain FED54_13695 PF00155 Aminotransferase class I and II FED54_13700 PF08335 GlnD PII-uridylyltransferase FED54_13700 PF01966 HD domain FED54_13700 PF01909 Nucleotidyltransferase domain FED54_13705 PF02222 ATP-grasp domain FED54_13715 PF05437 Branched-chain amino acid transport protein (AzlD) FED54_13720 PF03591 AzlC protein FED54_13745 PF06071 Protein of unknown function (DUF933) FED54_13745 PF01926 50S ribosome-binding GTPase FED54_13750 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13755 PF09383 NIL domain FED54_13755 PF00005 ABC transporter FED54_13760 PF03180 NLPA lipoprotein FED54_13765 PF03180 NLPA lipoprotein FED54_13770 PF00296 Luciferase-like monooxygenase FED54_13780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_13780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_13795 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13800 PF00528 Binding-protein-dependent transport system inner membrane component FED54_13805 PF00005 ABC transporter FED54_13815 PF01037 Lrp/AsnC ligand binding domain FED54_13820 PF01709 Transcriptional regulator FED54_13830 PF00440 Bacterial regulatory proteins, tetR family FED54_13855 PF03466 LysR substrate binding domain FED54_13855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_13870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED54_13880 PF00892 EamA-like transporter family FED54_13905 PF13954 PapC N-terminal domain FED54_13905 PF00577 Outer membrane usher protein FED54_13905 PF13953 PapC C-terminal domain FED54_13910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FED54_13910 PF02753 Pili assembly chaperone PapD, C-terminal domain FED54_13915 PF16970 Type-1 fimbrial protein, A FED54_13930 PF06968 Biotin and Thiamin Synthesis associated domain FED54_13930 PF04055 Radical SAM superfamily FED54_13935 PF08331 Domain of unknown function (DUF1730) FED54_13940 PF03853 YjeF-related protein N-terminus FED54_13940 PF01256 Carbohydrate kinase FED54_13945 PF02075 Crossover junction endodeoxyribonuclease RuvC FED54_13960 PF00905 Penicillin binding protein transpeptidase domain FED54_13980 PF02773 S-adenosylmethionine synthetase, C-terminal domain FED54_13980 PF02772 S-adenosylmethionine synthetase, central domain FED54_13980 PF00438 S-adenosylmethionine synthetase, N-terminal domain FED54_13985 PF00456 Transketolase, thiamine diphosphate binding domain FED54_13985 PF02779 Transketolase, pyrimidine binding domain FED54_13985 PF02780 Transketolase, C-terminal domain FED54_13995 PF04264 YceI-like domain FED54_14005 PF09992 Phosphodiester glycosidase FED54_14015 PF05958 tRNA (Uracil-5-)-methyltransferase FED54_14020 PF04229 GrpB protein FED54_14025 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FED54_14025 PF00171 Aldehyde dehydrogenase family FED54_14025 PF01619 Proline dehydrogenase FED54_14025 PF14850 DNA-binding domain of Proline dehydrogenase FED54_14030 PF01037 Lrp/AsnC ligand binding domain FED54_14035 PF00474 Sodium:solute symporter family FED54_14040 PF02146 Sir2 family FED54_14045 PF01597 Glycine cleavage H-protein FED54_14050 PF12833 Helix-turn-helix domain FED54_14050 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FED54_14060 PF00664 ABC transporter transmembrane region FED54_14060 PF00005 ABC transporter FED54_14065 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FED54_14070 PF06912 Protein of unknown function (DUF1275) FED54_14075 PF00375 Sodium:dicarboxylate symporter family FED54_14090 PF08007 Cupin superfamily protein FED54_14095 PF02545 Maf-like protein FED54_14105 PF00162 Phosphoglycerate kinase FED54_14115 PF01116 Fructose-bisphosphate aldolase class-II FED54_14120 PF09312 SurA N-terminal domain FED54_14120 PF00639 PPIC-type PPIASE domain FED54_14125 PF04453 LPS transport system D FED54_14125 PF03968 OstA-like protein FED54_14130 PF01636 Phosphotransferase enzyme family FED54_14135 PF00483 Nucleotidyl transferase FED54_14140 PF02527 rRNA small subunit methyltransferase G FED54_14145 PF13614 AAA domain FED54_14150 PF02195 ParB-like nuclease domain FED54_14150 PF17762 HTH domain found in ParB protein FED54_14155 PF01618 MotA/TolQ/ExbB proton channel family FED54_14165 PF00005 ABC transporter FED54_14165 PF00664 ABC transporter transmembrane region FED54_14170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FED54_14175 PF02348 Cytidylyltransferase FED54_14180 PF09115 DNA polymerase III, delta subunit, C terminal FED54_14190 PF01026 TatD related DNase FED54_14205 PF07963 Prokaryotic N-terminal methylation motif FED54_14205 PF02501 Type II secretion system (T2SS), protein I FED54_14210 PF07963 Prokaryotic N-terminal methylation motif FED54_14210 PF11612 Type II secretion system (T2SS), protein J FED54_14225 PF03167 Uracil DNA glycosylase superfamily FED54_14235 PF14437 MafB19-like deaminase FED54_14245 PF02224 Cytidylate kinase FED54_14250 PF00575 S1 RNA binding domain FED54_14255 PF00216 Bacterial DNA-binding protein FED54_14265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED54_14275 PF00743 Flavin-binding monooxygenase-like FED54_14285 PF03969 AFG1-like ATPase FED54_14290 PF01274 Malate synthase FED54_14300 PF02472 Biopolymer transport protein ExbD/TolR FED54_14305 PF02472 Biopolymer transport protein ExbD/TolR FED54_14310 PF01618 MotA/TolQ/ExbB proton channel family FED54_14320 PF07715 TonB-dependent Receptor Plug Domain FED54_14320 PF00593 TonB dependent receptor FED54_14330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_14340 PF01432 Peptidase family M3 FED54_14345 PF00528 Binding-protein-dependent transport system inner membrane component FED54_14350 PF00528 Binding-protein-dependent transport system inner membrane component FED54_14355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED54_14355 PF00005 ABC transporter FED54_14370 PF00459 Inositol monophosphatase family FED54_14380 PF01649 Ribosomal protein S20 FED54_14385 PF13460 NAD(P)H-binding FED54_14390 PF03737 Aldolase/RraA FED54_14410 PF00270 DEAD/DEAH box helicase FED54_14410 PF17757 UvrB interaction domain FED54_14410 PF02559 CarD-like/TRCF domain FED54_14410 PF03461 TRCF domain FED54_14410 PF00271 Helicase conserved C-terminal domain FED54_14420 PF00211 Adenylate and Guanylate cyclase catalytic domain FED54_14425 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_14430 PF00012 Hsp70 protein FED54_14435 PF07743 HSCB C-terminal oligomerisation domain FED54_14435 PF00226 DnaJ domain FED54_14440 PF01521 Iron-sulphur cluster biosynthesis FED54_14445 PF01592 NifU-like N terminal domain FED54_14450 PF00266 Aminotransferase class-V FED54_14455 PF02082 Transcriptional regulator FED54_14470 PF00216 Bacterial DNA-binding protein FED54_14475 PF09312 SurA N-terminal domain FED54_14475 PF00639 PPIC-type PPIASE domain FED54_14480 PF12833 Helix-turn-helix domain FED54_14480 PF12852 Cupin FED54_14485 PF00487 Fatty acid desaturase FED54_14490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_14490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_14490 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_14495 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_14495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_14495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_14500 PF03109 ABC1 family FED54_14510 PF04073 Aminoacyl-tRNA editing domain FED54_14515 PF04183 IucA / IucC family FED54_14515 PF06276 Ferric iron reductase FhuF-like transporter FED54_14520 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FED54_14525 PF07690 Major Facilitator Superfamily FED54_14530 PF06276 Ferric iron reductase FhuF-like transporter FED54_14530 PF04183 IucA / IucC family FED54_14535 PF04183 IucA / IucC family FED54_14535 PF06276 Ferric iron reductase FhuF-like transporter FED54_14545 PF03737 Aldolase/RraA FED54_14550 PF07715 TonB-dependent Receptor Plug Domain FED54_14550 PF00593 TonB dependent receptor FED54_14590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FED54_14595 PF02277 Phosphoribosyltransferase FED54_14600 PF00300 Histidine phosphatase superfamily (branch 1) FED54_14610 PF02654 Cobalamin-5-phosphate synthase FED54_14615 PF00793 DAHP synthetase I family FED54_14625 PF01925 Sulfite exporter TauE/SafE FED54_14650 PF02684 Lipid-A-disaccharide synthetase FED54_14660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_14665 PF00005 ABC transporter FED54_14700 PF01230 HIT domain FED54_14730 PF08241 Methyltransferase domain FED54_14735 PF00561 alpha/beta hydrolase fold FED54_14740 PF01053 Cys/Met metabolism PLP-dependent enzyme FED54_14755 PF02575 YbaB/EbfC DNA-binding family FED54_14760 PF02132 RecR protein FED54_14760 PF13662 Toprim domain FED54_14785 PF05166 YcgL domain FED54_14795 PF00004 ATPase family associated with various cellular activities (AAA) FED54_14795 PF17862 AAA+ lid domain FED54_14795 PF01434 Peptidase family M41 FED54_14805 PF00291 Pyridoxal-phosphate dependent enzyme FED54_14810 PF05175 Methyltransferase small domain FED54_14815 PF01264 Chorismate synthase FED54_14820 PF08448 PAS fold FED54_14820 PF00990 Diguanylate cyclase, GGDEF domain FED54_14835 PF04055 Radical SAM superfamily FED54_14840 PF00676 Dehydrogenase E1 component FED54_14845 PF02780 Transketolase, C-terminal domain FED54_14845 PF02779 Transketolase, pyrimidine binding domain FED54_14850 PF02817 e3 binding domain FED54_14850 PF00364 Biotin-requiring enzyme FED54_14850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED54_14855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_14860 PF00106 short chain dehydrogenase FED54_14865 PF00107 Zinc-binding dehydrogenase FED54_14865 PF08240 Alcohol dehydrogenase GroES-like domain FED54_14870 PF01062 Bestrophin, RFP-TM, chloride channel FED54_14875 PF02954 Bacterial regulatory protein, Fis family FED54_14875 PF00158 Sigma-54 interaction domain FED54_14875 PF00072 Response regulator receiver domain FED54_14880 PF00753 Metallo-beta-lactamase superfamily FED54_14880 PF04273 Putative phosphatase (DUF442) FED54_14885 PF04273 Putative phosphatase (DUF442) FED54_14885 PF00753 Metallo-beta-lactamase superfamily FED54_14890 PF01925 Sulfite exporter TauE/SafE FED54_14905 PF12833 Helix-turn-helix domain FED54_14905 PF06445 GyrI-like small molecule binding domain FED54_14910 PF01638 HxlR-like helix-turn-helix FED54_14915 PF02525 Flavodoxin-like fold FED54_14945 PF00528 Binding-protein-dependent transport system inner membrane component FED54_14950 PF00005 ABC transporter FED54_14965 PF00083 Sugar (and other) transporter FED54_14970 PF00593 TonB dependent receptor FED54_14970 PF07715 TonB-dependent Receptor Plug Domain FED54_14975 PF00206 Lyase FED54_14975 PF10415 Fumarase C C-terminus FED54_14990 PF03466 LysR substrate binding domain FED54_14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_14995 PF03466 LysR substrate binding domain FED54_14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15000 PF02803 Thiolase, C-terminal domain FED54_15000 PF00108 Thiolase, N-terminal domain FED54_15005 PF02667 Short chain fatty acid transporter FED54_15010 PF01144 Coenzyme A transferase FED54_15015 PF01144 Coenzyme A transferase FED54_15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15020 PF03466 LysR substrate binding domain FED54_15040 PF00440 Bacterial regulatory proteins, tetR family FED54_15060 PF12833 Helix-turn-helix domain FED54_15060 PF06719 AraC-type transcriptional regulator N-terminus FED54_15065 PF07690 Major Facilitator Superfamily FED54_15070 PF01738 Dienelactone hydrolase family FED54_15085 PF01613 Flavin reductase like domain FED54_15100 PF00175 Oxidoreductase NAD-binding domain FED54_15100 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_15100 PF00970 Oxidoreductase FAD-binding domain FED54_15105 PF00866 Ring hydroxylating beta subunit FED54_15110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_15110 PF00355 Rieske [2Fe-2S] domain FED54_15115 PF03459 TOBE domain FED54_15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15125 PF00528 Binding-protein-dependent transport system inner membrane component FED54_15130 PF03459 TOBE domain FED54_15130 PF00005 ABC transporter FED54_15135 PF00106 short chain dehydrogenase FED54_15140 PF00857 Isochorismatase family FED54_15140 PF00550 Phosphopantetheine attachment site FED54_15150 PF00149 Calcineurin-like phosphoesterase FED54_15155 PF02503 Polyphosphate kinase middle domain FED54_15155 PF13089 Polyphosphate kinase N-terminal domain FED54_15155 PF13090 Polyphosphate kinase C-terminal domain 2 FED54_15155 PF17941 Polyphosphate kinase C-terminal domain 1 FED54_15160 PF08042 PqqA family FED54_15165 PF12706 Beta-lactamase superfamily domain FED54_15170 PF03070 TENA/THI-4/PQQC family FED54_15175 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FED54_15180 PF04055 Radical SAM superfamily FED54_15180 PF13186 Iron-sulfur cluster-binding domain FED54_15185 PF01244 Membrane dipeptidase (Peptidase family M19) FED54_15205 PF13091 PLD-like domain FED54_15220 PF00199 Catalase FED54_15235 PF00107 Zinc-binding dehydrogenase FED54_15235 PF08240 Alcohol dehydrogenase GroES-like domain FED54_15250 PF00419 Fimbrial protein FED54_15255 PF00577 Outer membrane usher protein FED54_15255 PF13954 PapC N-terminal domain FED54_15255 PF13953 PapC C-terminal domain FED54_15260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FED54_15260 PF02753 Pili assembly chaperone PapD, C-terminal domain FED54_15265 PF16970 Type-1 fimbrial protein, A FED54_15285 PF00296 Luciferase-like monooxygenase FED54_15290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_15295 PF00528 Binding-protein-dependent transport system inner membrane component FED54_15300 PF12911 N-terminal TM domain of oligopeptide transport permease C FED54_15300 PF00528 Binding-protein-dependent transport system inner membrane component FED54_15305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED54_15305 PF00005 ABC transporter FED54_15310 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_15310 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_15310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_15320 PF00664 ABC transporter transmembrane region FED54_15320 PF00005 ABC transporter FED54_15325 PF00664 ABC transporter transmembrane region FED54_15325 PF00005 ABC transporter FED54_15335 PF00593 TonB dependent receptor FED54_15335 PF07715 TonB-dependent Receptor Plug Domain FED54_15345 PF00296 Luciferase-like monooxygenase FED54_15350 PF00158 Sigma-54 interaction domain FED54_15355 PF00902 Sec-independent protein translocase protein (TatC) FED54_15360 PF02416 mttA/Hcf106 family FED54_15365 PF02416 mttA/Hcf106 family FED54_15370 PF00005 ABC transporter FED54_15375 PF00528 Binding-protein-dependent transport system inner membrane component FED54_15380 PF00528 Binding-protein-dependent transport system inner membrane component FED54_15385 PF09084 NMT1/THI5 like FED54_15390 PF00296 Luciferase-like monooxygenase FED54_15395 PF03544 Gram-negative bacterial TonB protein C-terminal FED54_15400 PF01618 MotA/TolQ/ExbB proton channel family FED54_15405 PF02472 Biopolymer transport protein ExbD/TolR FED54_15410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_15420 PF07715 TonB-dependent Receptor Plug Domain FED54_15420 PF00593 TonB dependent receptor FED54_15425 PF00296 Luciferase-like monooxygenase FED54_15435 PF17760 UvrA interaction domain FED54_15435 PF17755 UvrA DNA-binding domain FED54_15435 PF00005 ABC transporter FED54_15440 PF00873 AcrB/AcrD/AcrF family FED54_15445 PF00529 HlyD membrane-fusion protein of T1SS FED54_15445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_15450 PF00486 Transcriptional regulatory protein, C terminal FED54_15450 PF00072 Response regulator receiver domain FED54_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_15455 PF00672 HAMP domain FED54_15455 PF16527 Two-component sensor protein CpxA, periplasmic domain FED54_15455 PF00512 His Kinase A (phospho-acceptor) domain FED54_15465 PF12833 Helix-turn-helix domain FED54_15465 PF02311 AraC-like ligand binding domain FED54_15470 PF12146 Serine aminopeptidase, S33 FED54_15505 PF04607 Region found in RelA / SpoT proteins FED54_15505 PF13291 ACT domain FED54_15505 PF02824 TGS domain FED54_15515 PF01975 Survival protein SurE FED54_15540 PF07690 Major Facilitator Superfamily FED54_15545 PF13533 Biotin-lipoyl like FED54_15560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FED54_15565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FED54_15565 PF14572 Phosphoribosyl synthetase-associated domain FED54_15585 PF00005 ABC transporter FED54_15600 PF08240 Alcohol dehydrogenase GroES-like domain FED54_15600 PF00107 Zinc-binding dehydrogenase FED54_15615 PF06719 AraC-type transcriptional regulator N-terminus FED54_15615 PF12833 Helix-turn-helix domain FED54_15620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED54_15620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED54_15625 PF07690 Major Facilitator Superfamily FED54_15630 PF01370 NAD dependent epimerase/dehydratase family FED54_15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15635 PF03466 LysR substrate binding domain FED54_15645 PF00920 Dehydratase family FED54_15650 PF00171 Aldehyde dehydrogenase family FED54_15665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_15665 PF00529 HlyD membrane-fusion protein of T1SS FED54_15675 PF07690 Major Facilitator Superfamily FED54_15680 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED54_15685 PF13417 Glutathione S-transferase, N-terminal domain FED54_15690 PF01494 FAD binding domain FED54_15695 PF07883 Cupin domain FED54_15700 PF03466 LysR substrate binding domain FED54_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15715 PF03466 LysR substrate binding domain FED54_15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15725 PF08450 SMP-30/Gluconolactonase/LRE-like region FED54_15740 PF04909 Amidohydrolase FED54_15745 PF07690 Major Facilitator Superfamily FED54_15775 PF13360 PQQ-like domain FED54_15780 PF01638 HxlR-like helix-turn-helix FED54_15790 PF00043 Glutathione S-transferase, C-terminal domain FED54_15790 PF02798 Glutathione S-transferase, N-terminal domain FED54_15795 PF07681 DoxX FED54_15800 PF02525 Flavodoxin-like fold FED54_15805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_15805 PF03466 LysR substrate binding domain FED54_15820 PF07690 Major Facilitator Superfamily FED54_15850 PF00440 Bacterial regulatory proteins, tetR family FED54_15850 PF08359 YsiA-like protein, C-terminal region FED54_15855 PF12706 Beta-lactamase superfamily domain FED54_15865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_15875 PF00376 MerR family regulatory protein FED54_15875 PF09278 MerR, DNA binding FED54_15880 PF01872 RibD C-terminal domain FED54_15885 PF00106 short chain dehydrogenase FED54_15890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_15890 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_15895 PF01047 MarR family FED54_15900 PF07859 alpha/beta hydrolase fold FED54_15930 PF06628 Catalase-related immune-responsive FED54_15930 PF00199 Catalase FED54_15935 PF00561 alpha/beta hydrolase fold FED54_15945 PF00171 Aldehyde dehydrogenase family FED54_15950 PF00107 Zinc-binding dehydrogenase FED54_15950 PF08240 Alcohol dehydrogenase GroES-like domain FED54_15955 PF00474 Sodium:solute symporter family FED54_15960 PF04341 Protein of unknown function, DUF485 FED54_15965 PF13193 AMP-binding enzyme C-terminal domain FED54_15965 PF00501 AMP-binding enzyme FED54_15975 PF02954 Bacterial regulatory protein, Fis family FED54_15975 PF06506 Propionate catabolism activator FED54_15975 PF00158 Sigma-54 interaction domain FED54_15985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_15985 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_15985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_16000 PF01636 Phosphotransferase enzyme family FED54_16005 PF00171 Aldehyde dehydrogenase family FED54_16015 PF07690 Major Facilitator Superfamily FED54_16020 PF00920 Dehydratase family FED54_16025 PF00392 Bacterial regulatory proteins, gntR family FED54_16025 PF07729 FCD domain FED54_16035 PF03466 LysR substrate binding domain FED54_16035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_16040 PF13378 Enolase C-terminal domain-like FED54_16040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FED54_16045 PF02426 Muconolactone delta-isomerase FED54_16050 PF04444 Catechol dioxygenase N terminus FED54_16050 PF00775 Dioxygenase FED54_16055 PF01144 Coenzyme A transferase FED54_16060 PF01144 Coenzyme A transferase FED54_16065 PF00108 Thiolase, N-terminal domain FED54_16065 PF02803 Thiolase, C-terminal domain FED54_16070 PF12146 Serine aminopeptidase, S33 FED54_16075 PF00171 Aldehyde dehydrogenase family FED54_16085 PF07833 Copper amine oxidase N-terminal domain FED54_16085 PF01179 Copper amine oxidase, enzyme domain FED54_16085 PF02727 Copper amine oxidase, N2 domain FED54_16085 PF02728 Copper amine oxidase, N3 domain FED54_16090 PF02311 AraC-like ligand binding domain FED54_16090 PF12833 Helix-turn-helix domain FED54_16095 PF01613 Flavin reductase like domain FED54_16100 PF00175 Oxidoreductase NAD-binding domain FED54_16100 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_16115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_16115 PF00355 Rieske [2Fe-2S] domain FED54_16130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_16135 PF01425 Amidase FED54_16145 PF07690 Major Facilitator Superfamily FED54_16155 PF00106 short chain dehydrogenase FED54_16170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_16170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_16170 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_16175 PF03466 LysR substrate binding domain FED54_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_16180 PF09339 IclR helix-turn-helix domain FED54_16180 PF01614 Bacterial transcriptional regulator FED54_16185 PF00753 Metallo-beta-lactamase superfamily FED54_16195 PF04143 Sulphur transport FED54_16205 PF01011 PQQ enzyme repeat FED54_16205 PF13360 PQQ-like domain FED54_16210 PF04966 Carbohydrate-selective porin, OprB family FED54_16215 PF05048 Periplasmic copper-binding protein (NosD) FED54_16220 PF01487 Type I 3-dehydroquinase FED54_16225 PF00775 Dioxygenase FED54_16230 PF00775 Dioxygenase FED54_16230 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FED54_16235 PF02627 Carboxymuconolactone decarboxylase family FED54_16240 PF07690 Major Facilitator Superfamily FED54_16245 PF00561 alpha/beta hydrolase fold FED54_16250 PF00206 Lyase FED54_16250 PF10397 Adenylosuccinate lyase C-terminus FED54_16255 PF02803 Thiolase, C-terminal domain FED54_16255 PF00108 Thiolase, N-terminal domain FED54_16260 PF01144 Coenzyme A transferase FED54_16265 PF01144 Coenzyme A transferase FED54_16270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FED54_16275 PF04977 Septum formation initiator FED54_16285 PF00113 Enolase, C-terminal TIM barrel domain FED54_16285 PF03952 Enolase, N-terminal domain FED54_16290 PF00793 DAHP synthetase I family FED54_16295 PF00117 Glutamine amidotransferase class-I FED54_16295 PF06418 CTP synthase N-terminus FED54_16325 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_16325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_16340 PF00793 DAHP synthetase I family FED54_16345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FED54_16350 PF17871 AAA lid domain FED54_16350 PF07724 AAA domain (Cdc48 subfamily) FED54_16350 PF02861 Clp amino terminal domain, pathogenicity island component FED54_16350 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_16350 PF00004 ATPase family associated with various cellular activities (AAA) FED54_16355 PF02617 ATP-dependent Clp protease adaptor protein ClpS FED54_16365 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED54_16365 PF02774 Semialdehyde dehydrogenase, dimerisation domain FED54_16380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FED54_16385 PF00291 Pyridoxal-phosphate dependent enzyme FED54_16385 PF00585 C-terminal regulatory domain of Threonine dehydratase FED54_16390 PF02080 TrkA-C domain FED54_16390 PF02254 TrkA-N domain FED54_16395 PF02386 Cation transport protein FED54_16400 PF02253 Phospholipase A1 FED54_16405 PF08367 Peptidase M16C associated FED54_16405 PF05193 Peptidase M16 inactive domain FED54_16405 PF00675 Insulinase (Peptidase family M16) FED54_16410 PF00593 TonB dependent receptor FED54_16410 PF07715 TonB-dependent Receptor Plug Domain FED54_16415 PF00294 pfkB family carbohydrate kinase FED54_16425 PF07290 Protein of unknown function (DUF1449) FED54_16435 PF01654 Cytochrome bd terminal oxidase subunit I FED54_16440 PF02322 Cytochrome bd terminal oxidase subunit II FED54_16445 PF08173 Membrane bound YbgT-like protein FED54_16455 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FED54_16465 PF00448 SRP54-type protein, GTPase domain FED54_16465 PF02881 SRP54-type protein, helical bundle domain FED54_16495 PF00478 IMP dehydrogenase / GMP reductase domain FED54_16495 PF00571 CBS domain FED54_16500 PF00202 Aminotransferase class-III FED54_16505 PF00462 Glutaredoxin FED54_16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_16515 PF03466 LysR substrate binding domain FED54_16520 PF00557 Metallopeptidase family M24 FED54_16525 PF05525 Branched-chain amino acid transport protein FED54_16550 PF02896 PEP-utilising enzyme, TIM barrel domain FED54_16550 PF05524 PEP-utilising enzyme, N-terminal FED54_16550 PF00381 PTS HPr component phosphorylation site FED54_16550 PF00391 PEP-utilising enzyme, mobile domain FED54_16550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FED54_16555 PF00294 pfkB family carbohydrate kinase FED54_16560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FED54_16560 PF02378 Phosphotransferase system, EIIC FED54_16575 PF00563 EAL domain FED54_16575 PF03707 Bacterial signalling protein N terminal repeat FED54_16575 PF00990 Diguanylate cyclase, GGDEF domain FED54_16585 PF07995 Glucose / Sorbosone dehydrogenase FED54_16600 PF02586 SOS response associated peptidase (SRAP) FED54_16610 PF05922 Peptidase inhibitor I9 FED54_16610 PF00082 Subtilase family FED54_16620 PF00324 Amino acid permease FED54_16625 PF00266 Aminotransferase class-V FED54_16630 PF01037 Lrp/AsnC ligand binding domain FED54_16655 PF13419 Haloacid dehalogenase-like hydrolase FED54_16660 PF01479 S4 domain FED54_16665 PF00154 recA bacterial DNA recombination protein FED54_16670 PF02631 RecX family FED54_16685 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_16685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FED54_16690 PF07977 FabA-like domain FED54_16695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FED54_16695 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_16705 PF07244 Surface antigen variable number repeat FED54_16705 PF01103 Surface antigen FED54_16710 PF17820 PDZ domain FED54_16710 PF02163 Peptidase family M50 FED54_16710 PF13180 PDZ domain FED54_16715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FED54_16715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FED54_16715 PF13288 DXP reductoisomerase C-terminal domain FED54_16725 PF01255 Putative undecaprenyl diphosphate synthase FED54_16730 PF01765 Ribosome recycling factor FED54_16735 PF00696 Amino acid kinase family FED54_16740 PF00919 Uncharacterized protein family UPF0004 FED54_16740 PF18693 TRAM domain FED54_16740 PF04055 Radical SAM superfamily FED54_16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_16750 PF00512 His Kinase A (phospho-acceptor) domain FED54_16750 PF00989 PAS fold FED54_16755 PF00158 Sigma-54 interaction domain FED54_16755 PF02954 Bacterial regulatory protein, Fis family FED54_16755 PF00072 Response regulator receiver domain FED54_16760 PF00440 Bacterial regulatory proteins, tetR family FED54_16765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FED54_16765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FED54_16775 PF02542 YgbB family FED54_16785 PF01266 FAD dependent oxidoreductase FED54_16810 PF00206 Lyase FED54_16810 PF10415 Fumarase C C-terminus FED54_16815 PF16363 GDP-mannose 4,6 dehydratase FED54_16820 PF02635 DsrE/DsrF-like family FED54_16840 PF00892 EamA-like transporter family FED54_16845 PF00392 Bacterial regulatory proteins, gntR family FED54_16845 PF00155 Aminotransferase class I and II FED54_16850 PF01638 HxlR-like helix-turn-helix FED54_16855 PF00994 Probable molybdopterin binding domain FED54_16855 PF03453 MoeA N-terminal region (domain I and II) FED54_16855 PF03454 MoeA C-terminal region (domain IV) FED54_16860 PF01967 MoaC family FED54_16860 PF00994 Probable molybdopterin binding domain FED54_16865 PF02391 MoaE protein FED54_16875 PF04055 Radical SAM superfamily FED54_16875 PF06463 Molybdenum Cofactor Synthesis C FED54_16885 PF12804 MobA-like NTP transferase domain FED54_16890 PF00384 Molybdopterin oxidoreductase FED54_16890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FED54_16890 PF01568 Molydopterin dinucleotide binding domain FED54_16890 PF04324 BFD-like [2Fe-2S] binding domain FED54_16895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED54_16895 PF04324 BFD-like [2Fe-2S] binding domain FED54_16895 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_16895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED54_16895 PF18267 Rubredoxin NAD+ reductase C-terminal domain FED54_16900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED54_16900 PF13806 Rieske-like [2Fe-2S] domain FED54_16900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED54_16900 PF18267 Rubredoxin NAD+ reductase C-terminal domain FED54_16900 PF04324 BFD-like [2Fe-2S] binding domain FED54_16900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_16910 PF00486 Transcriptional regulatory protein, C terminal FED54_16910 PF00072 Response regulator receiver domain FED54_16915 PF00005 ABC transporter FED54_16925 PF11799 impB/mucB/samB family C-terminal domain FED54_16925 PF00817 impB/mucB/samB family FED54_16925 PF13438 Domain of unknown function (DUF4113) FED54_16930 PF01220 Dehydroquinase class II FED54_16935 PF00364 Biotin-requiring enzyme FED54_16940 PF02785 Biotin carboxylase C-terminal domain FED54_16940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_16940 PF00289 Biotin carboxylase, N-terminal domain FED54_16950 PF12832 MFS_1 like family FED54_16990 PF07484 Phage Tail Collar Domain FED54_16990 PF08400 Prophage tail fibre N-terminal FED54_16990 PF03335 Phage tail fibre repeat FED54_17095 PF13276 HTH-like domain FED54_17095 PF13333 Integrase core domain FED54_17095 PF00665 Integrase core domain FED54_17285 PF01645 Conserved region in glutamate synthase FED54_17300 PF01565 FAD binding domain FED54_17300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FED54_17305 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED54_17315 PF00465 Iron-containing alcohol dehydrogenase FED54_17320 PF03061 Thioesterase superfamily FED54_17325 PF04185 Phosphoesterase family FED54_17325 PF05506 Domain of unknown function (DUF756) FED54_17330 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FED54_17330 PF12170 DNA polymerase III tau subunit V interacting with alpha FED54_17330 PF12169 DNA polymerase III subunits gamma and tau domain III FED54_17345 PF07690 Major Facilitator Superfamily FED54_17370 PF02803 Thiolase, C-terminal domain FED54_17370 PF00108 Thiolase, N-terminal domain FED54_17380 PF03466 LysR substrate binding domain FED54_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_17390 PF01810 LysE type translocator FED54_17395 PF01037 Lrp/AsnC ligand binding domain FED54_17400 PF03594 Benzoate membrane transport protein FED54_17405 PF02308 MgtC family FED54_17410 PF00689 Cation transporting ATPase, C-terminus FED54_17410 PF00690 Cation transporter/ATPase, N-terminus FED54_17425 PF00582 Universal stress protein family FED54_17430 PF12848 ABC transporter FED54_17430 PF00005 ABC transporter FED54_17455 PF07715 TonB-dependent Receptor Plug Domain FED54_17455 PF00593 TonB dependent receptor FED54_17485 PF00924 Mechanosensitive ion channel FED54_17490 PF00593 TonB dependent receptor FED54_17490 PF07715 TonB-dependent Receptor Plug Domain FED54_17530 PF01494 FAD binding domain FED54_17555 PF07690 Major Facilitator Superfamily FED54_17560 PF07690 Major Facilitator Superfamily FED54_17565 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_17565 PF14759 Reductase C-terminal FED54_17570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FED54_17575 PF00106 short chain dehydrogenase FED54_17580 PF00355 Rieske [2Fe-2S] domain FED54_17585 PF00866 Ring hydroxylating beta subunit FED54_17590 PF00355 Rieske [2Fe-2S] domain FED54_17590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_17595 PF03466 LysR substrate binding domain FED54_17600 PF00561 alpha/beta hydrolase fold FED54_17605 PF03573 outer membrane porin, OprD family FED54_17610 PF07836 DmpG-like communication domain FED54_17610 PF00682 HMGL-like FED54_17615 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FED54_17615 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED54_17620 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED54_17630 PF07690 Major Facilitator Superfamily FED54_17635 PF12706 Beta-lactamase superfamily domain FED54_17645 PF02656 Domain of unknown function (DUF202) FED54_17665 PF00664 ABC transporter transmembrane region FED54_17665 PF00005 ABC transporter FED54_17665 PF03412 Peptidase C39 family FED54_17670 PF02321 Outer membrane efflux protein FED54_17690 PF00691 OmpA family FED54_17690 PF01389 OmpA-like transmembrane domain FED54_17720 PF01389 OmpA-like transmembrane domain FED54_17720 PF00691 OmpA family FED54_17725 PF03895 YadA-like membrane anchor domain FED54_17725 PF05662 Coiled stalk of trimeric autotransporter adhesin FED54_17725 PF13018 Extended Signal Peptide of Type V secretion system FED54_17725 PF05658 Head domain of trimeric autotransporter adhesin FED54_17740 PF01037 Lrp/AsnC ligand binding domain FED54_17745 PF01817 Chorismate mutase type II FED54_17765 PF11940 Domain of unknown function (DUF3458) Ig-like fold FED54_17765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FED54_17765 PF01433 Peptidase family M1 domain FED54_17780 PF02110 Hydroxyethylthiazole kinase family FED54_17785 PF06445 GyrI-like small molecule binding domain FED54_17795 PF14493 Helix-turn-helix domain FED54_17795 PF05970 PIF1-like helicase FED54_17800 PF00465 Iron-containing alcohol dehydrogenase FED54_17815 PF00171 Aldehyde dehydrogenase family FED54_17820 PF13520 Amino acid permease FED54_17825 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FED54_17830 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FED54_17835 PF00117 Glutamine amidotransferase class-I FED54_17835 PF00958 GMP synthase C terminal domain FED54_17835 PF02540 NAD synthase FED54_17840 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FED54_17840 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED54_17845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FED54_17850 PF00149 Calcineurin-like phosphoesterase FED54_17860 PF00881 Nitroreductase family FED54_17870 PF17209 Hfq protein FED54_17880 PF01119 DNA mismatch repair protein, C-terminal domain FED54_17880 PF08676 MutL C terminal dimerisation domain FED54_17885 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FED54_17890 PF00849 RNA pseudouridylate synthase FED54_17890 PF01479 S4 domain FED54_17905 PF01479 S4 domain FED54_17905 PF00849 RNA pseudouridylate synthase FED54_17915 PF04284 Protein of unknown function (DUF441) FED54_17920 PF03466 LysR substrate binding domain FED54_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_17940 PF07690 Major Facilitator Superfamily FED54_17945 PF00520 Ion transport protein FED54_17945 PF00027 Cyclic nucleotide-binding domain FED54_17975 PF01103 Surface antigen FED54_17975 PF07244 Surface antigen variable number repeat FED54_17975 PF17243 POTRA domain TamA domain 1 FED54_17980 PF07690 Major Facilitator Superfamily FED54_17985 PF03232 Ubiquinone biosynthesis protein COQ7 FED54_17995 PF00120 Glutamine synthetase, catalytic domain FED54_18000 PF00072 Response regulator receiver domain FED54_18000 PF00486 Transcriptional regulatory protein, C terminal FED54_18005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_18005 PF00512 His Kinase A (phospho-acceptor) domain FED54_18005 PF02702 Osmosensitive K+ channel His kinase sensor domain FED54_18005 PF13493 Domain of unknown function (DUF4118) FED54_18010 PF02669 K+-transporting ATPase, c chain FED54_18020 PF03814 Potassium-transporting ATPase A subunit FED54_18035 PF03109 ABC1 family FED54_18040 PF00899 ThiF family FED54_18045 PF01613 Flavin reductase like domain FED54_18050 PF00501 AMP-binding enzyme FED54_18050 PF13193 AMP-binding enzyme C-terminal domain FED54_18055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_18055 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_18055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_18060 PF00106 short chain dehydrogenase FED54_18065 PF12833 Helix-turn-helix domain FED54_18070 PF13847 Methyltransferase domain FED54_18070 PF17827 PrmC N-terminal domain FED54_18075 PF03462 PCRF domain FED54_18075 PF00472 RF-1 domain FED54_18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_18085 PF03466 LysR substrate binding domain FED54_18105 PF00296 Luciferase-like monooxygenase FED54_18115 PF13994 PgaD-like protein FED54_18120 PF00535 Glycosyl transferase family 2 FED54_18125 PF01522 Polysaccharide deacetylase FED54_18125 PF14883 Hypothetical glycosyl hydrolase family 13 FED54_18135 PF03618 Kinase/pyrophosphorylase FED54_18140 PF02896 PEP-utilising enzyme, TIM barrel domain FED54_18140 PF00391 PEP-utilising enzyme, mobile domain FED54_18140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FED54_18150 PF06481 COX Aromatic Rich Motif FED54_18150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FED54_18155 PF00115 Cytochrome C and Quinol oxidase polypeptide I FED54_18160 PF00510 Cytochrome c oxidase subunit III FED54_18165 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FED54_18170 PF01040 UbiA prenyltransferase family FED54_18175 PF01250 Ribosomal protein S6 FED54_18180 PF01084 Ribosomal protein S18 FED54_18185 PF01281 Ribosomal protein L9, N-terminal domain FED54_18185 PF03948 Ribosomal protein L9, C-terminal domain FED54_18190 PF00772 DnaB-like helicase N terminal domain FED54_18190 PF03796 DnaB-like helicase C terminal domain FED54_18195 PF01168 Alanine racemase, N-terminal domain FED54_18195 PF00842 Alanine racemase, C-terminal domain FED54_18205 PF08379 Bacterial transglutaminase-like N-terminal region FED54_18205 PF01841 Transglutaminase-like superfamily FED54_18215 PF14403 Circularly permuted ATP-grasp type 2 FED54_18225 PF01134 Glucose inhibited division protein A FED54_18225 PF13932 GidA associated domain FED54_18245 PF02954 Bacterial regulatory protein, Fis family FED54_18255 PF02844 Phosphoribosylglycinamide synthetase, N domain FED54_18255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FED54_18255 PF02843 Phosphoribosylglycinamide synthetase, C domain FED54_18260 PF03180 NLPA lipoprotein FED54_18265 PF00005 ABC transporter FED54_18265 PF09383 NIL domain FED54_18270 PF00528 Binding-protein-dependent transport system inner membrane component FED54_18275 PF00753 Metallo-beta-lactamase superfamily FED54_18275 PF16123 Hydroxyacylglutathione hydrolase C-terminus FED54_18285 PF00375 Sodium:dicarboxylate symporter family FED54_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_18305 PF03466 LysR substrate binding domain FED54_18310 PF07690 Major Facilitator Superfamily FED54_18315 PF01494 FAD binding domain FED54_18325 PF17932 Tetracyclin repressor-like, C-terminal domain FED54_18325 PF00440 Bacterial regulatory proteins, tetR family FED54_18335 PF07995 Glucose / Sorbosone dehydrogenase FED54_18340 PF00892 EamA-like transporter family FED54_18345 PF01177 Asp/Glu/Hydantoin racemase FED54_18350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_18350 PF00085 Thioredoxin FED54_18365 PF02470 MlaD protein FED54_18370 PF04403 Paraquat-inducible protein A FED54_18410 PF00293 NUDIX domain FED54_18415 PF08946 Osmosensory transporter coiled coil FED54_18415 PF00083 Sugar (and other) transporter FED54_18470 PF00392 Bacterial regulatory proteins, gntR family FED54_18470 PF07729 FCD domain FED54_18480 PF03616 Sodium/glutamate symporter FED54_18485 PF00561 alpha/beta hydrolase fold FED54_18510 PF04076 Bacterial OB fold (BOF) protein FED54_18520 PF13649 Methyltransferase domain FED54_18540 PF00324 Amino acid permease FED54_18545 PF00171 Aldehyde dehydrogenase family FED54_18605 PF05860 haemagglutination activity domain FED54_18605 PF04829 Pre-toxin domain with VENN motif FED54_18605 PF13018 Extended Signal Peptide of Type V secretion system FED54_18605 PF13018 Extended Signal Peptide of Type V secretion system FED54_18605 PF13332 Hemagglutinin repeat FED54_18605 PF05860 haemagglutination activity domain FED54_18605 PF04829 Pre-toxin domain with VENN motif FED54_18605 PF13332 Hemagglutinin repeat FED54_18610 PF08479 POTRA domain, ShlB-type FED54_18610 PF17287 POTRA domain FED54_18610 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FED54_18635 PF03793 PASTA domain FED54_18635 PF00069 Protein kinase domain FED54_18655 PF00814 Glycoprotease family FED54_18660 PF01165 Ribosomal protein S21 FED54_18665 PF09424 Yqey-like protein FED54_18670 PF01435 Peptidase family M48 FED54_18675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED54_18675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED54_18690 PF00156 Phosphoribosyl transferase domain FED54_18695 PF02674 Colicin V production protein FED54_18700 PF01180 Dihydroorotate dehydrogenase FED54_18720 PF00182 Chitinase class I FED54_18975 PF03796 DnaB-like helicase C terminal domain FED54_18975 PF00772 DnaB-like helicase N terminal domain FED54_19080 PF00589 Phage integrase family FED54_19090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FED54_19090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FED54_19095 PF00881 Nitroreductase family FED54_19105 PF00270 DEAD/DEAH box helicase FED54_19105 PF00271 Helicase conserved C-terminal domain FED54_19110 PF00313 'Cold-shock' DNA-binding domain FED54_19120 PF04545 Sigma-70, region 4 FED54_19120 PF04542 Sigma-70 region 2 FED54_19120 PF00140 Sigma-70 factor, region 1.2 FED54_19125 PF04241 Protein of unknown function (DUF423) FED54_19135 PF05690 Thiazole biosynthesis protein ThiG FED54_19145 PF03883 Peroxide stress protein YaaA FED54_19155 PF06956 Regulator of RNA terminal phosphate cyclase FED54_19155 PF00158 Sigma-54 interaction domain FED54_19160 PF00753 Metallo-beta-lactamase superfamily FED54_19165 PF01139 tRNA-splicing ligase RtcB FED54_19180 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain FED54_19180 PF01137 RNA 3'-terminal phosphate cyclase FED54_19185 PF01546 Peptidase family M20/M25/M40 FED54_19185 PF07687 Peptidase dimerisation domain FED54_19195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED54_19200 PF01842 ACT domain FED54_19200 PF01817 Chorismate mutase type II FED54_19200 PF00800 Prephenate dehydratase FED54_19205 PF00756 Putative esterase FED54_19210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_19210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_19210 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_19215 PF00375 Sodium:dicarboxylate symporter family FED54_19225 PF00591 Glycosyl transferase family, a/b domain FED54_19225 PF02885 Glycosyl transferase family, helical bundle domain FED54_19230 PF07023 Protein of unknown function (DUF1315) FED54_19235 PF01513 ATP-NAD kinase FED54_19240 PF14814 Bifunctional transglycosylase second domain FED54_19240 PF00912 Transglycosylase FED54_19240 PF00905 Penicillin binding protein transpeptidase domain FED54_19250 PF00293 NUDIX domain FED54_19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_19260 PF00512 His Kinase A (phospho-acceptor) domain FED54_19260 PF08521 Two-component sensor kinase N-terminal FED54_19265 PF00072 Response regulator receiver domain FED54_19265 PF00486 Transcriptional regulatory protein, C terminal FED54_19275 PF00437 Type II/IV secretion system protein FED54_19285 PF01980 tRNA-methyltransferase O FED54_19285 PF18389 TrmO C-terminal domain FED54_19290 PF00175 Oxidoreductase NAD-binding domain FED54_19290 PF00970 Oxidoreductase FAD-binding domain FED54_19295 PF02567 Phenazine biosynthesis-like protein FED54_19300 PF00155 Aminotransferase class I and II FED54_19300 PF00392 Bacterial regulatory proteins, gntR family FED54_19310 PF00037 4Fe-4S binding domain FED54_19315 PF00893 Small Multidrug Resistance protein FED54_19320 PF00005 ABC transporter FED54_19325 PF00528 Binding-protein-dependent transport system inner membrane component FED54_19330 PF00528 Binding-protein-dependent transport system inner membrane component FED54_19335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_19355 PF13533 Biotin-lipoyl like FED54_19360 PF00873 AcrB/AcrD/AcrF family FED54_19365 PF02321 Outer membrane efflux protein FED54_19370 PF00464 Serine hydroxymethyltransferase FED54_19465 PF00583 Acetyltransferase (GNAT) family FED54_19555 PF01695 IstB-like ATP binding protein FED54_19580 PF00717 Peptidase S24-like FED54_19640 PF00589 Phage integrase family FED54_19645 PF00005 ABC transporter FED54_19650 PF01061 ABC-2 type transporter FED54_19655 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FED54_19655 PF14489 QueF-like protein FED54_19665 PF01098 Cell cycle protein FED54_19670 PF13406 Transglycosylase SLT domain FED54_19675 PF03330 Lytic transglycolase FED54_19675 PF05036 Sporulation related domain FED54_19695 PF12833 Helix-turn-helix domain FED54_19705 PF00889 Elongation factor TS FED54_19710 PF00318 Ribosomal protein S2 FED54_19715 PF00557 Metallopeptidase family M24 FED54_19725 PF07690 Major Facilitator Superfamily FED54_19735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_19735 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_19740 PF04055 Radical SAM superfamily FED54_19745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_19745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_19745 PF09317 Domain of unknown function (DUF1974) FED54_19760 PF05221 S-adenosyl-L-homocysteine hydrolase FED54_19760 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FED54_19765 PF02219 Methylenetetrahydrofolate reductase FED54_19770 PF04452 RNA methyltransferase FED54_19775 PF00563 EAL domain FED54_19775 PF00990 Diguanylate cyclase, GGDEF domain FED54_19775 PF03707 Bacterial signalling protein N terminal repeat FED54_19780 PF03949 Malic enzyme, NAD binding domain FED54_19780 PF00390 Malic enzyme, N-terminal domain FED54_19780 PF01515 Phosphate acetyl/butaryl transferase FED54_19785 PF01743 Poly A polymerase head domain FED54_19785 PF12627 Probable RNA and SrmB- binding site of polymerase A FED54_19790 PF13180 PDZ domain FED54_19795 PF01784 NIF3 (NGG1p interacting factor 3) FED54_19800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FED54_19800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FED54_19835 PF01040 UbiA prenyltransferase family FED54_19840 PF04345 Chorismate lyase FED54_19850 PF00854 POT family FED54_19860 PF00117 Glutamine amidotransferase class-I FED54_19865 PF01433 Peptidase family M1 domain FED54_19865 PF11838 ERAP1-like C-terminal domain FED54_19870 PF07715 TonB-dependent Receptor Plug Domain FED54_19870 PF00593 TonB dependent receptor FED54_19875 PF02885 Glycosyl transferase family, helical bundle domain FED54_19875 PF00591 Glycosyl transferase family, a/b domain FED54_19885 PF01713 Smr domain FED54_19895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FED54_19895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FED54_19900 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_19900 PF01799 [2Fe-2S] binding domain FED54_19910 PF00144 Beta-lactamase FED54_19925 PF05675 Protein of unknown function (DUF817) FED54_19930 PF01208 Uroporphyrinogen decarboxylase (URO-D) FED54_19940 PF00425 chorismate binding enzyme FED54_19950 PF00975 Thioesterase domain FED54_19955 PF00005 ABC transporter FED54_19955 PF00664 ABC transporter transmembrane region FED54_19960 PF00005 ABC transporter FED54_19960 PF00664 ABC transporter transmembrane region FED54_19970 PF00282 Pyridoxal-dependent decarboxylase conserved domain FED54_19975 PF00857 Isochorismatase family FED54_19975 PF00550 Phosphopantetheine attachment site FED54_19980 PF13193 AMP-binding enzyme C-terminal domain FED54_19980 PF00501 AMP-binding enzyme FED54_19985 PF00550 Phosphopantetheine attachment site FED54_19985 PF00668 Condensation domain FED54_19985 PF00501 AMP-binding enzyme FED54_19990 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FED54_19995 PF00593 TonB dependent receptor FED54_19995 PF07715 TonB-dependent Receptor Plug Domain FED54_20000 PF01497 Periplasmic binding protein FED54_20005 PF00005 ABC transporter FED54_20010 PF01032 FecCD transport family FED54_20015 PF01032 FecCD transport family FED54_20020 PF00975 Thioesterase domain FED54_20020 PF00501 AMP-binding enzyme FED54_20020 PF13193 AMP-binding enzyme C-terminal domain FED54_20020 PF00550 Phosphopantetheine attachment site FED54_20020 PF00668 Condensation domain FED54_20025 PF13193 AMP-binding enzyme C-terminal domain FED54_20025 PF00668 Condensation domain FED54_20025 PF00550 Phosphopantetheine attachment site FED54_20025 PF00501 AMP-binding enzyme FED54_20035 PF08348 YheO-like PAS domain FED54_20035 PF13309 HTH domain FED54_20040 PF00291 Pyridoxal-phosphate dependent enzyme FED54_20045 PF17954 Quercetinase C-terminal cupin domain FED54_20045 PF02678 Pirin FED54_20090 PF04328 Selenoprotein, putative FED54_20095 PF13722 5TM C-terminal transporter carbon starvation CstA FED54_20095 PF02554 Carbon starvation protein CstA FED54_20100 PF01132 Elongation factor P (EF-P) OB domain FED54_20100 PF09285 Elongation factor P, C-terminal FED54_20100 PF08207 Elongation factor P (EF-P) KOW-like domain FED54_20105 PF04055 Radical SAM superfamily FED54_20115 PF00563 EAL domain FED54_20115 PF12792 CSS motif domain associated with EAL FED54_20120 PF01197 Ribosomal protein L31 FED54_20125 PF13593 SBF-like CPA transporter family (DUF4137) FED54_20130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_20135 PF07690 Major Facilitator Superfamily FED54_20140 PF13654 AAA domain FED54_20140 PF05362 Lon protease (S16) C-terminal proteolytic domain FED54_20145 PF13438 Domain of unknown function (DUF4113) FED54_20145 PF00817 impB/mucB/samB family FED54_20145 PF11799 impB/mucB/samB family C-terminal domain FED54_20145 PF11798 IMS family HHH motif FED54_20150 PF00717 Peptidase S24-like FED54_20175 PF04225 Opacity-associated protein A LysM-like domain FED54_20175 PF01551 Peptidase family M23 FED54_20295 PF13737 Transposase DDE domain FED54_20365 PF01435 Peptidase family M48 FED54_20395 PF00665 Integrase core domain FED54_20415 PF00582 Universal stress protein family FED54_20420 PF01740 STAS domain FED54_20420 PF00916 Sulfate permease family FED54_20450 PF02899 Phage integrase, N-terminal SAM-like domain FED54_20450 PF00589 Phage integrase family FED54_20475 PF00665 Integrase core domain FED54_20495 PF00809 Pterin binding enzyme FED54_20500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_20500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_20500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_20500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_20510 PF07690 Major Facilitator Superfamily FED54_20515 PF02909 Tetracyclin repressor-like, C-terminal domain FED54_20515 PF00440 Bacterial regulatory proteins, tetR family FED54_20540 PF02796 Helix-turn-helix domain of resolvase FED54_20540 PF00239 Resolvase, N terminal domain FED54_20550 PF13610 DDE domain FED54_20555 PF01051 Initiator Replication protein FED54_20565 PF01636 Phosphotransferase enzyme family FED54_20590 PF07091 Ribosomal RNA methyltransferase (FmrO) FED54_20615 PF00809 Pterin binding enzyme FED54_20645 PF00809 Pterin binding enzyme FED54_20650 PF00893 Small Multidrug Resistance protein FED54_20660 PF07690 Major Facilitator Superfamily FED54_20670 PF13495 Phage integrase, N-terminal SAM-like domain FED54_20670 PF00589 Phage integrase family FED54_20675 PF13610 DDE domain FED54_20735 PF06613 KorB C-terminal beta-barrel domain FED54_20735 PF02195 ParB-like nuclease domain FED54_20735 PF08535 KorB domain FED54_20740 PF13614 AAA domain FED54_20755 PF00809 Pterin binding enzyme FED54_20760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_20760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_20760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_20760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_20785 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FED54_20790 PF01636 Phosphotransferase enzyme family FED54_20810 PF01131 DNA topoisomerase FED54_20810 PF01751 Toprim domain FED54_20810 PF01396 Topoisomerase DNA binding C4 zinc finger FED54_20890 PF13610 DDE domain FED54_20900 PF00107 Zinc-binding dehydrogenase FED54_20900 PF08240 Alcohol dehydrogenase GroES-like domain FED54_20905 PF02583 Metal-sensitive transcriptional repressor FED54_20930 PF13610 DDE domain FED54_20980 PF05973 Phage derived protein Gp49-like (DUF891) FED54_21000 PF13195 Protein of unknown function (DUF4011) FED54_21000 PF13087 AAA domain FED54_21000 PF13086 AAA domain FED54_21010 PF00239 Resolvase, N terminal domain FED54_21010 PF02796 Helix-turn-helix domain of resolvase FED54_21030 PF01740 STAS domain FED54_21030 PF00916 Sulfate permease family FED54_21035 PF13610 DDE domain FED54_21090 PF13173 AAA domain FED54_21090 PF13635 Domain of unknown function (DUF4143) FED54_21105 PF13737 Transposase DDE domain FED54_21145 PF13610 DDE domain FED54_21170 PF01636 Phosphotransferase enzyme family FED54_21210 PF00437 Type II/IV secretion system protein FED54_21210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FED54_21260 PF13614 AAA domain FED54_21265 PF17762 HTH domain found in ParB protein FED54_21265 PF02195 ParB-like nuclease domain FED54_21300 PF07715 TonB-dependent Receptor Plug Domain FED54_21300 PF00593 TonB dependent receptor FED54_21320 PF00239 Resolvase, N terminal domain FED54_21320 PF02796 Helix-turn-helix domain of resolvase FED54_21325 PF01126 Heme oxygenase FED54_21330 PF00593 TonB dependent receptor FED54_21330 PF07715 TonB-dependent Receptor Plug Domain FED54_21335 PF04304 Protein of unknown function (DUF454)