locus-tag class description HB366_00005 PF08299 Bacterial dnaA protein helix-turn-helix HB366_00005 PF00308 Bacterial dnaA protein HB366_00005 PF11638 DnaA N-terminal domain HB366_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HB366_00010 PF02767 DNA polymerase III beta subunit, central domain HB366_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HB366_00015 PF02463 RecF/RecN/SMC N terminal domain HB366_00020 PF01751 Toprim domain HB366_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_00020 PF18053 DNA gyrase B subunit insert domain HB366_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HB366_00020 PF00204 DNA gyrase B HB366_00030 PF09335 SNARE associated Golgi protein HB366_00035 PF12848 ABC transporter HB366_00035 PF00005 ABC transporter HB366_00055 PF01521 Iron-sulphur cluster biosynthesis HB366_00060 PF00561 alpha/beta hydrolase fold HB366_00065 PF03702 Anhydro-N-acetylmuramic acid kinase HB366_00070 PF00579 tRNA synthetases class I (W and Y) HB366_00110 PF00209 Sodium:neurotransmitter symporter family HB366_00120 PF01189 16S rRNA methyltransferase RsmB/F HB366_00120 PF01029 NusB family HB366_00125 PF00551 Formyl transferase HB366_00125 PF02911 Formyl transferase, C-terminal domain HB366_00130 PF00920 Dehydratase family HB366_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_00145 PF03466 LysR substrate binding domain HB366_00150 PF00860 Permease family HB366_00155 PF00311 Phosphoenolpyruvate carboxylase HB366_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region HB366_00160 PF00440 Bacterial regulatory proteins, tetR family HB366_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_00170 PF00873 AcrB/AcrD/AcrF family HB366_00180 PF00226 DnaJ domain HB366_00180 PF01556 DnaJ C terminal domain HB366_00180 PF00684 DnaJ central domain HB366_00190 PF01113 Dihydrodipicolinate reductase, N-terminus HB366_00190 PF05173 Dihydrodipicolinate reductase, C-terminus HB366_00200 PF07690 Major Facilitator Superfamily HB366_00205 PF00248 Aldo/keto reductase family HB366_00210 PF03466 LysR substrate binding domain HB366_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_00225 PF00392 Bacterial regulatory proteins, gntR family HB366_00225 PF00155 Aminotransferase class I and II HB366_00230 PF08240 Alcohol dehydrogenase GroES-like domain HB366_00230 PF00107 Zinc-binding dehydrogenase HB366_00235 PF03352 Methyladenine glycosylase HB366_00250 PF14815 NUDIX domain HB366_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein HB366_00250 PF00633 Helix-hairpin-helix motif HB366_00250 PF10576 Iron-sulfur binding domain of endonuclease III HB366_00265 PF07043 Protein of unknown function (DUF1328) HB366_00270 PF03692 Putative zinc- or iron-chelating domain HB366_00275 PF07995 Glucose / Sorbosone dehydrogenase HB366_00280 PF00004 ATPase family associated with various cellular activities (AAA) HB366_00280 PF12002 MgsA AAA+ ATPase C terminal HB366_00280 PF16193 AAA C-terminal domain HB366_00285 PF01226 Formate/nitrite transporter HB366_00295 PF01259 SAICAR synthetase HB366_00305 PF00701 Dihydrodipicolinate synthetase family HB366_00310 PF00857 Isochorismatase family HB366_00315 PF01758 Sodium Bile acid symporter family HB366_00320 PF01554 MatE HB366_00325 PF04463 Protein of unknown function (DUF523) HB366_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB366_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB366_00345 PF02798 Glutathione S-transferase, N-terminal domain HB366_00345 PF14497 Glutathione S-transferase, C-terminal domain HB366_00355 PF00324 Amino acid permease HB366_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain HB366_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain HB366_00375 PF07702 UTRA domain HB366_00375 PF00392 Bacterial regulatory proteins, gntR family HB366_00380 PF05962 HutD HB366_00385 PF01175 Urocanase Rossmann-like domain HB366_00385 PF17392 Urocanase C-terminal domain HB366_00385 PF17391 Urocanase N-terminal domain HB366_00390 PF00221 Aromatic amino acid lyase HB366_00395 PF00324 Amino acid permease HB366_00400 PF01979 Amidohydrolase family HB366_00405 PF00491 Arginase family HB366_00420 PF01177 Asp/Glu/Hydantoin racemase HB366_00425 PF01380 SIS domain HB366_00430 PF12804 MobA-like NTP transferase domain HB366_00430 PF14602 Hexapeptide repeat of succinyl-transferase HB366_00430 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_00435 PF04608 Phosphatidylglycerophosphatase A HB366_00440 PF00586 AIR synthase related protein, N-terminal domain HB366_00440 PF02769 AIR synthase related protein, C-terminal domain HB366_00445 PF01029 NusB family HB366_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase HB366_00455 PF00925 GTP cyclohydrolase II HB366_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HB366_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase HB366_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HB366_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HB366_00490 PF00581 Rhodanese-like domain HB366_00495 PF02666 Phosphatidylserine decarboxylase HB366_00505 PF03069 Acetamidase/Formamidase family HB366_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_00525 PF11808 Phosphate regulon sensor protein PhoR HB366_00525 PF00989 PAS fold HB366_00525 PF00512 His Kinase A (phospho-acceptor) domain HB366_00530 PF00072 Response regulator receiver domain HB366_00530 PF00486 Transcriptional regulatory protein, C terminal HB366_00540 PF00106 short chain dehydrogenase HB366_00545 PF01554 MatE HB366_00550 PF00155 Aminotransferase class I and II HB366_00555 PF04286 Protein of unknown function (DUF445) HB366_00570 PF04262 Glutamate-cysteine ligase HB366_00575 PF02600 Disulfide bond formation protein DsbB HB366_00580 PF04717 Type VI secretion system, phage-baseplate injector HB366_00585 PF01476 LysM domain HB366_00585 PF00877 NlpC/P60 family HB366_00600 PF05728 Uncharacterised protein family (UPF0227) HB366_00605 PF00204 DNA gyrase B HB366_00605 PF01751 Toprim domain HB366_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_00605 PF00986 DNA gyrase B subunit, carboxyl terminus HB366_00610 PF00106 short chain dehydrogenase HB366_00615 PF04115 Ureidoglycolate lyase HB366_00620 PF03561 Allantoicase repeat HB366_00625 PF01494 FAD binding domain HB366_00635 PF00860 Permease family HB366_00640 PF00576 HIUase/Transthyretin family HB366_00670 PF11412 Disulphide bond corrector protein DsbC HB366_00670 PF02683 Cytochrome C biogenesis protein transmembrane region HB366_00675 PF00990 Diguanylate cyclase, GGDEF domain HB366_00675 PF07694 5TMR of 5TMR-LYT HB366_00680 PF07859 alpha/beta hydrolase fold HB366_00690 PF03960 ArsC family HB366_00695 PF03372 Endonuclease/Exonuclease/phosphatase family HB366_00700 PF00156 Phosphoribosyl transferase domain HB366_00705 PF00593 TonB dependent receptor HB366_00705 PF07715 TonB-dependent Receptor Plug Domain HB366_00715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HB366_00715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HB366_00720 PF04101 Glycosyltransferase family 28 C-terminal domain HB366_00720 PF03033 Glycosyltransferase family 28 N-terminal domain HB366_00725 PF08245 Mur ligase middle domain HB366_00725 PF02875 Mur ligase family, glutamate ligase domain HB366_00725 PF01225 Mur ligase family, catalytic domain HB366_00730 PF07478 D-ala D-ala ligase C-terminus HB366_00730 PF01820 D-ala D-ala ligase N-terminus HB366_00735 PF08478 POTRA domain, FtsQ-type HB366_00735 PF03799 Cell division protein FtsQ HB366_00740 PF02491 SHS2 domain inserted in FTSA HB366_00745 PF00091 Tubulin/FtsZ family, GTPase domain HB366_00745 PF12327 FtsZ family, C-terminal domain HB366_00750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HB366_00760 PF01551 Peptidase family M23 HB366_00765 PF17831 Pyruvate dehydrogenase E1 component middle domain HB366_00765 PF00456 Transketolase, thiamine diphosphate binding domain HB366_00770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HB366_00770 PF00364 Biotin-requiring enzyme HB366_00770 PF02817 e3 binding domain HB366_00780 PF01169 Uncharacterized protein family UPF0016 HB366_00785 PF00593 TonB dependent receptor HB366_00785 PF07715 TonB-dependent Receptor Plug Domain HB366_00790 PF00258 Flavodoxin HB366_00790 PF01613 Flavin reductase like domain HB366_00795 PF03692 Putative zinc- or iron-chelating domain HB366_00800 PF00478 IMP dehydrogenase / GMP reductase domain HB366_00800 PF00571 CBS domain HB366_00805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB366_00805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB366_00805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB366_00805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB366_00810 PF01243 Pyridoxamine 5'-phosphate oxidase HB366_00810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HB366_00815 PF01368 DHH family HB366_00815 PF02272 DHHA1 domain HB366_00815 PF17768 RecJ OB domain HB366_00835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB366_00840 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HB366_00845 PF04452 RNA methyltransferase HB366_00850 PF00924 Mechanosensitive ion channel HB366_00860 PF16177 Acetyl-coenzyme A synthetase N-terminus HB366_00860 PF00501 AMP-binding enzyme HB366_00860 PF13193 AMP-binding enzyme C-terminal domain HB366_00865 PF00857 Isochorismatase family HB366_00870 PF01037 Lrp/AsnC ligand binding domain HB366_00875 PF00872 Transposase, Mutator family HB366_00880 PF00296 Luciferase-like monooxygenase HB366_00885 PF03358 NADPH-dependent FMN reductase HB366_00890 PF00196 Bacterial regulatory proteins, luxR family HB366_00890 PF00072 Response regulator receiver domain HB366_00900 PF01627 Hpt domain HB366_00900 PF00512 His Kinase A (phospho-acceptor) domain HB366_00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_00900 PF00072 Response regulator receiver domain HB366_00900 PF00672 HAMP domain HB366_00905 PF04341 Protein of unknown function, DUF485 HB366_00910 PF00474 Sodium:solute symporter family HB366_00920 PF02028 BCCT, betaine/carnitine/choline family transporter HB366_00930 PF00990 Diguanylate cyclase, GGDEF domain HB366_00930 PF17158 Membrane-associated sensor, integral membrane domain HB366_00940 PF17760 UvrA interaction domain HB366_00940 PF17755 UvrA DNA-binding domain HB366_00940 PF00005 ABC transporter HB366_00945 PF16925 Tetracyclin repressor-like, C-terminal domain HB366_00945 PF00440 Bacterial regulatory proteins, tetR family HB366_00950 PF00107 Zinc-binding dehydrogenase HB366_00950 PF08240 Alcohol dehydrogenase GroES-like domain HB366_00960 PF06942 GlpM protein HB366_00965 PF08543 Phosphomethylpyrimidine kinase HB366_00965 PF03070 TENA/THI-4/PQQC family HB366_00965 PF02581 Thiamine monophosphate synthase HB366_00975 PF07690 Major Facilitator Superfamily HB366_00980 PF00436 Single-strand binding protein family HB366_00990 PF03591 AzlC protein HB366_01000 PF00324 Amino acid permease HB366_01005 PF00155 Aminotransferase class I and II HB366_01005 PF00392 Bacterial regulatory proteins, gntR family HB366_01010 PF00202 Aminotransferase class-III HB366_01015 PF00171 Aldehyde dehydrogenase family HB366_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_01025 PF00857 Isochorismatase family HB366_01030 PF02678 Pirin HB366_01030 PF05726 Pirin C-terminal cupin domain HB366_01035 PF01593 Flavin containing amine oxidoreductase HB366_01055 PF07690 Major Facilitator Superfamily HB366_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_01060 PF03466 LysR substrate binding domain HB366_01080 PF00248 Aldo/keto reductase family HB366_01085 PF02311 AraC-like ligand binding domain HB366_01085 PF12833 Helix-turn-helix domain HB366_01110 PF01638 HxlR-like helix-turn-helix HB366_01115 PF02525 Flavodoxin-like fold HB366_01135 PF02705 K+ potassium transporter HB366_01160 PF00230 Major intrinsic protein HB366_01175 PF00977 Histidine biosynthesis protein HB366_01180 PF01636 Phosphotransferase enzyme family HB366_01195 PF03992 Antibiotic biosynthesis monooxygenase HB366_01210 PF00977 Histidine biosynthesis protein HB366_01225 PF00117 Glutamine amidotransferase class-I HB366_01230 PF00475 Imidazoleglycerol-phosphate dehydratase HB366_01250 PF00583 Acetyltransferase (GNAT) family HB366_01255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HB366_01255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HB366_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_01265 PF00672 HAMP domain HB366_01265 PF00512 His Kinase A (phospho-acceptor) domain HB366_01270 PF00072 Response regulator receiver domain HB366_01270 PF00486 Transcriptional regulatory protein, C terminal HB366_01275 PF16921 Tex protein YqgF-like domain HB366_01275 PF09371 Tex-like protein N-terminal domain HB366_01275 PF17674 HHH domain HB366_01275 PF00575 S1 RNA binding domain HB366_01280 PF00916 Sulfate permease family HB366_01280 PF01740 STAS domain HB366_01285 PF00106 short chain dehydrogenase HB366_01290 PF01053 Cys/Met metabolism PLP-dependent enzyme HB366_01295 PF12848 ABC transporter HB366_01295 PF00005 ABC transporter HB366_01320 PF04191 Phospholipid methyltransferase HB366_01340 PF00529 HlyD membrane-fusion protein of T1SS HB366_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_01345 PF00873 AcrB/AcrD/AcrF family HB366_01350 PF01545 Cation efflux family HB366_01380 PF00324 Amino acid permease HB366_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain HB366_01410 PF01795 MraW methylase family HB366_01420 PF03717 Penicillin-binding Protein dimerisation domain HB366_01420 PF00905 Penicillin binding protein transpeptidase domain HB366_01425 PF01225 Mur ligase family, catalytic domain HB366_01425 PF02875 Mur ligase family, glutamate ligase domain HB366_01425 PF08245 Mur ligase middle domain HB366_01430 PF01225 Mur ligase family, catalytic domain HB366_01430 PF02875 Mur ligase family, glutamate ligase domain HB366_01430 PF08245 Mur ligase middle domain HB366_01435 PF00953 Glycosyl transferase family 4 HB366_01445 PF13847 Methyltransferase domain HB366_01450 PF17092 Penicillin-binding protein OB-like domain HB366_01450 PF00912 Transglycosylase HB366_01450 PF00905 Penicillin binding protein transpeptidase domain HB366_01475 PF03958 Bacterial type II/III secretion system short domain HB366_01475 PF00263 Bacterial type II and III secretion system protein HB366_01475 PF11741 AMIN domain HB366_01475 PF07660 Secretin and TonB N terminus short domain HB366_01480 PF01202 Shikimate kinase HB366_01485 PF01761 3-dehydroquinate synthase HB366_01495 PF01493 GXGXG motif HB366_01495 PF01645 Conserved region in glutamate synthase HB366_01495 PF04898 Glutamate synthase central domain HB366_01495 PF00310 Glutamine amidotransferases class-II HB366_01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_01500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HB366_01510 PF04011 LemA family HB366_01515 PF04536 TPM domain HB366_01535 PF11846 Virulence factor membrane-bound polymerase, C-terminal HB366_01535 PF04932 O-Antigen ligase HB366_01535 PF15864 Protein glycosylation ligase HB366_01540 PF00210 Ferritin-like domain HB366_01545 PF04324 BFD-like [2Fe-2S] binding domain HB366_01550 PF01042 Endoribonuclease L-PSP HB366_01555 PF02824 TGS domain HB366_01555 PF13291 ACT domain HB366_01555 PF04607 Region found in RelA / SpoT proteins HB366_01565 PF01192 RNA polymerase Rpb6 HB366_01570 PF00625 Guanylate kinase HB366_01575 PF02401 LytB protein HB366_01615 PF00886 Ribosomal protein S16 HB366_01620 PF05239 PRC-barrel domain HB366_01620 PF01782 RimM N-terminal domain HB366_01625 PF01746 tRNA (Guanine-1)-methyltransferase HB366_01630 PF01245 Ribosomal protein L19 HB366_01635 PF00561 alpha/beta hydrolase fold HB366_01640 PF03280 Proteobacterial lipase chaperone protein HB366_01645 PF01509 TruB family pseudouridylate synthase (N terminal domain) HB366_01645 PF09157 Pseudouridine synthase II TruB, C-terminal HB366_01645 PF16198 tRNA pseudouridylate synthase B C-terminal domain HB366_01650 PF01925 Sulfite exporter TauE/SafE HB366_01660 PF00892 EamA-like transporter family HB366_01665 PF00892 EamA-like transporter family HB366_01670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB366_01670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB366_01675 PF01565 FAD binding domain HB366_01675 PF02913 FAD linked oxidases, C-terminal domain HB366_01685 PF03992 Antibiotic biosynthesis monooxygenase HB366_01690 PF02525 Flavodoxin-like fold HB366_01700 PF07690 Major Facilitator Superfamily HB366_01705 PF12805 FUSC-like inner membrane protein yccS HB366_01710 PF00080 Copper/zinc superoxide dismutase (SODC) HB366_01715 PF01594 AI-2E family transporter HB366_01720 PF13614 AAA domain HB366_01750 PF00324 Amino acid permease HB366_01755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HB366_01755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HB366_01760 PF00202 Aminotransferase class-III HB366_01765 PF04958 Arginine N-succinyltransferase beta subunit HB366_01770 PF00171 Aldehyde dehydrogenase family HB366_01775 PF04996 Succinylarginine dihydrolase HB366_01780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HB366_01795 PF05922 Peptidase inhibitor I9 HB366_01795 PF00082 Subtilase family HB366_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_01810 PF03466 LysR substrate binding domain HB366_01815 PF00892 EamA-like transporter family HB366_01825 PF02092 Glycyl-tRNA synthetase beta subunit HB366_01825 PF05746 DALR anticodon binding domain HB366_01830 PF02091 Glycyl-tRNA synthetase alpha subunit HB366_01855 PF00571 CBS domain HB366_01860 PF04024 PspC domain HB366_01870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_01870 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB366_01870 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_01870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_01880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HB366_01880 PF08501 Shikimate dehydrogenase substrate binding domain HB366_01880 PF01488 Shikimate / quinate 5-dehydrogenase HB366_01885 PF01218 Coproporphyrinogen III oxidase HB366_01890 PF00925 GTP cyclohydrolase II HB366_01895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HB366_01895 PF02780 Transketolase, C-terminal domain HB366_01895 PF02779 Transketolase, pyrimidine binding domain HB366_01900 PF00459 Inositol monophosphatase family HB366_01905 PF03880 DbpA RNA binding domain HB366_01905 PF00270 DEAD/DEAH box helicase HB366_01905 PF12343 Cold shock protein DEAD box A HB366_01905 PF00271 Helicase conserved C-terminal domain HB366_01915 PF00005 ABC transporter HB366_01920 PF02405 Permease MlaE HB366_01930 PF05494 MlaC protein HB366_01940 PF01544 CorA-like Mg2+ transporter protein HB366_01945 PF03641 Possible lysine decarboxylase HB366_01950 PF00293 NUDIX domain HB366_01955 PF00156 Phosphoribosyl transferase domain HB366_01960 PF00270 DEAD/DEAH box helicase HB366_01960 PF17191 RecG wedge domain HB366_01960 PF00271 Helicase conserved C-terminal domain HB366_01975 PF01553 Acyltransferase HB366_01985 PF00375 Sodium:dicarboxylate symporter family HB366_01995 PF01926 50S ribosome-binding GTPase HB366_02000 PF02082 Transcriptional regulator HB366_02005 PF00175 Oxidoreductase NAD-binding domain HB366_02005 PF00042 Globin HB366_02005 PF00970 Oxidoreductase FAD-binding domain HB366_02010 PF05872 Bacterial protein of unknown function (DUF853) HB366_02015 PF01053 Cys/Met metabolism PLP-dependent enzyme HB366_02020 PF00117 Glutamine amidotransferase class-I HB366_02025 PF00338 Ribosomal protein S10p/S20e HB366_02030 PF00297 Ribosomal protein L3 HB366_02035 PF00573 Ribosomal protein L4/L1 family HB366_02040 PF00276 Ribosomal protein L23 HB366_02045 PF03947 Ribosomal Proteins L2, C-terminal domain HB366_02045 PF00181 Ribosomal Proteins L2, RNA binding domain HB366_02050 PF00203 Ribosomal protein S19 HB366_02055 PF00237 Ribosomal protein L22p/L17e HB366_02060 PF00189 Ribosomal protein S3, C-terminal domain HB366_02060 PF07650 KH domain HB366_02065 PF00252 Ribosomal protein L16p/L10e HB366_02070 PF00831 Ribosomal L29 protein HB366_02075 PF00366 Ribosomal protein S17 HB366_02080 PF00238 Ribosomal protein L14p/L23e HB366_02085 PF00467 KOW motif HB366_02085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HB366_02090 PF00673 ribosomal L5P family C-terminus HB366_02090 PF00281 Ribosomal protein L5 HB366_02095 PF00253 Ribosomal protein S14p/S29e HB366_02100 PF00410 Ribosomal protein S8 HB366_02105 PF00347 Ribosomal protein L6 HB366_02110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HB366_02115 PF03719 Ribosomal protein S5, C-terminal domain HB366_02115 PF00333 Ribosomal protein S5, N-terminal domain HB366_02120 PF00327 Ribosomal protein L30p/L7e HB366_02125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HB366_02130 PF00344 SecY translocase HB366_02135 PF00444 Ribosomal protein L36 HB366_02140 PF00416 Ribosomal protein S13/S18 HB366_02145 PF00411 Ribosomal protein S11 HB366_02150 PF00163 Ribosomal protein S4/S9 N-terminal domain HB366_02150 PF01479 S4 domain HB366_02155 PF01000 RNA polymerase Rpb3/RpoA insert domain HB366_02155 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HB366_02155 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HB366_02160 PF01196 Ribosomal protein L17 HB366_02165 PF00743 Flavin-binding monooxygenase-like HB366_02170 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_02170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_02170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_02175 PF03937 Flavinator of succinate dehydrogenase HB366_02205 PF09526 Probable metal-binding protein (DUF2387) HB366_02210 PF01432 Peptidase family M3 HB366_02215 PF17876 Cold shock domain HB366_02215 PF00575 S1 RNA binding domain HB366_02215 PF00773 RNB domain HB366_02215 PF08206 Ribonuclease B OB domain HB366_02215 PF08461 Ribonuclease R winged-helix domain HB366_02260 PF01557 Fumarylacetoacetate (FAA) hydrolase family HB366_02265 PF12833 Helix-turn-helix domain HB366_02270 PF00892 EamA-like transporter family HB366_02275 PF03631 Virulence factor BrkB HB366_02280 PF03358 NADPH-dependent FMN reductase HB366_02305 PF02130 Uncharacterized protein family UPF0054 HB366_02310 PF02562 PhoH-like protein HB366_02315 PF00919 Uncharacterized protein family UPF0004 HB366_02315 PF04055 Radical SAM superfamily HB366_02315 PF01938 TRAM domain HB366_02320 PF01464 Transglycosylase SLT domain HB366_02320 PF10145 Phage-related minor tail protein HB366_02320 PF01551 Peptidase family M23 HB366_02330 PF00056 lactate/malate dehydrogenase, NAD binding domain HB366_02330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HB366_02350 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HB366_02355 PF01066 CDP-alcohol phosphatidyltransferase HB366_02400 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_02400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_02400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_02405 PF00440 Bacterial regulatory proteins, tetR family HB366_02405 PF17932 Tetracyclin repressor-like, C-terminal domain HB366_02420 PF01039 Carboxyl transferase domain HB366_02425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_02425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_02425 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_02435 PF00289 Biotin carboxylase, N-terminal domain HB366_02435 PF00364 Biotin-requiring enzyme HB366_02435 PF02785 Biotin carboxylase C-terminal domain HB366_02435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB366_02445 PF04386 Stringent starvation protein B HB366_02450 PF13417 Glutathione S-transferase, N-terminal domain HB366_02450 PF00043 Glutathione S-transferase, C-terminal domain HB366_02455 PF00380 Ribosomal protein S9/S16 HB366_02460 PF00572 Ribosomal protein L13 HB366_02465 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HB366_02470 PF00398 Ribosomal RNA adenine dimethylase HB366_02475 PF00149 Calcineurin-like phosphoesterase HB366_02495 PF13167 GTP-binding GTPase N-terminal HB366_02495 PF01926 50S ribosome-binding GTPase HB366_02495 PF16360 GTP-binding GTPase Middle Region HB366_02505 PF13091 PLD-like domain HB366_02510 PF10518 TAT (twin-arginine translocation) pathway signal sequence HB366_02510 PF00149 Calcineurin-like phosphoesterase HB366_02515 PF00691 OmpA family HB366_02515 PF01389 OmpA-like transmembrane domain HB366_02520 PF00990 Diguanylate cyclase, GGDEF domain HB366_02520 PF17152 Periplasmic sensor domain HB366_02555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB366_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_02565 PF00753 Metallo-beta-lactamase superfamily HB366_02565 PF04273 Putative phosphatase (DUF442) HB366_02570 PF00561 alpha/beta hydrolase fold HB366_02575 PF00085 Thioredoxin HB366_02580 PF03061 Thioesterase superfamily HB366_02590 PF04461 Protein of unknown function (DUF520) HB366_02600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HB366_02600 PF01266 FAD dependent oxidoreductase HB366_02610 PF03795 YCII-related domain HB366_02615 PF04279 Intracellular septation protein A HB366_02620 PF02811 PHP domain HB366_02625 PF01062 Bestrophin, RFP-TM, chloride channel HB366_02630 PF04002 RadC-like JAB domain HB366_02635 PF04127 DNA / pantothenate metabolism flavoprotein HB366_02635 PF02441 Flavoprotein HB366_02640 PF07549 SecD/SecF GG Motif HB366_02640 PF02355 Protein export membrane protein HB366_02645 PF13721 SecD export protein N-terminal TM region HB366_02645 PF07549 SecD/SecF GG Motif HB366_02645 PF02355 Protein export membrane protein HB366_02650 PF02699 Preprotein translocase subunit HB366_02655 PF01702 Queuine tRNA-ribosyltransferase HB366_02670 PF02547 Queuosine biosynthesis protein HB366_02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_02680 PF00512 His Kinase A (phospho-acceptor) domain HB366_02680 PF07689 KaiB domain HB366_02685 PF08335 GlnD PII-uridylyltransferase HB366_02685 PF03710 Glutamate-ammonia ligase adenylyltransferase HB366_02690 PF01063 Amino-transferase class IV HB366_02705 PF01522 Polysaccharide deacetylase HB366_02710 PF00535 Glycosyl transferase family 2 HB366_02715 PF00534 Glycosyl transferases group 1 HB366_02715 PF13439 Glycosyltransferase Family 4 HB366_02740 PF17102 Stealth protein CR3, conserved region 3 HB366_02740 PF11380 Stealth protein CR2, conserved region 2 HB366_02740 PF17101 Stealth protein CR1, conserved region 1 HB366_02745 PF02938 GAD domain HB366_02745 PF00152 tRNA synthetases class II (D, K and N) HB366_02745 PF01336 OB-fold nucleic acid binding domain HB366_02755 PF07715 TonB-dependent Receptor Plug Domain HB366_02755 PF00593 TonB dependent receptor HB366_02775 PF06146 Phosphate-starvation-inducible E HB366_02780 PF00043 Glutathione S-transferase, C-terminal domain HB366_02780 PF02798 Glutathione S-transferase, N-terminal domain HB366_02785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_02785 PF03466 LysR substrate binding domain HB366_02790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_02790 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_02790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_02790 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB366_02795 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB366_02795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_02795 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_02795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_02805 PF00512 His Kinase A (phospho-acceptor) domain HB366_02805 PF00672 HAMP domain HB366_02805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_02810 PF00486 Transcriptional regulatory protein, C terminal HB366_02810 PF00072 Response regulator receiver domain HB366_02815 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HB366_02835 PF01923 Cobalamin adenosyltransferase HB366_02840 PF07715 TonB-dependent Receptor Plug Domain HB366_02840 PF00593 TonB dependent receptor HB366_02845 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HB366_02850 PF00291 Pyridoxal-phosphate dependent enzyme HB366_02875 PF00290 Tryptophan synthase alpha chain HB366_02880 PF01039 Carboxyl transferase domain HB366_02885 PF08245 Mur ligase middle domain HB366_02885 PF02875 Mur ligase family, glutamate ligase domain HB366_02900 PF00753 Metallo-beta-lactamase superfamily HB366_02905 PF00578 AhpC/TSA family HB366_02905 PF10417 C-terminal domain of 1-Cys peroxiredoxin HB366_02910 PF01043 SecA preprotein cross-linking domain HB366_02910 PF07516 SecA Wing and Scaffold domain HB366_02910 PF07517 SecA DEAD-like domain HB366_02910 PF02810 SEC-C motif HB366_02920 PF07690 Major Facilitator Superfamily HB366_02920 PF00083 Sugar (and other) transporter HB366_02925 PF03006 Haemolysin-III related HB366_02955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB366_02955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB366_02955 PF00378 Enoyl-CoA hydratase/isomerase HB366_02960 PF02803 Thiolase, C-terminal domain HB366_02960 PF00108 Thiolase, N-terminal domain HB366_02965 PF02311 AraC-like ligand binding domain HB366_02965 PF12833 Helix-turn-helix domain HB366_02970 PF02515 CoA-transferase family III HB366_02975 PF04966 Carbohydrate-selective porin, OprB family HB366_02980 PF01011 PQQ enzyme repeat HB366_02985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HB366_02985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HB366_02995 PF00893 Small Multidrug Resistance protein HB366_03005 PF02803 Thiolase, C-terminal domain HB366_03005 PF00108 Thiolase, N-terminal domain HB366_03015 PF13505 Outer membrane protein beta-barrel domain HB366_03015 PF00691 OmpA family HB366_03025 PF01139 tRNA-splicing ligase RtcB HB366_03030 PF00324 Amino acid permease HB366_03035 PF05175 Methyltransferase small domain HB366_03035 PF08468 Methyltransferase small domain N-terminal HB366_03040 PF00860 Permease family HB366_03050 PF01741 Large-conductance mechanosensitive channel, MscL HB366_03065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HB366_03065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HB366_03065 PF06827 Zinc finger found in FPG and IleRS HB366_03070 PF02245 Methylpurine-DNA glycosylase (MPG) HB366_03075 PF00593 TonB dependent receptor HB366_03075 PF07715 TonB-dependent Receptor Plug Domain HB366_03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB366_03095 PF03547 Membrane transport protein HB366_03105 PF13098 Thioredoxin-like domain HB366_03105 PF10411 Disulfide bond isomerase protein N-terminus HB366_03110 PF01571 Aminomethyltransferase folate-binding domain HB366_03120 PF04343 Protein of unknown function, DUF488 HB366_03125 PF08274 PhnA Zinc-Ribbon HB366_03125 PF03831 PhnA domain HB366_03130 PF07411 Domain of unknown function (DUF1508) HB366_03135 PF03129 Anticodon binding domain HB366_03135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HB366_03135 PF04073 Aminoacyl-tRNA editing domain HB366_03140 PF00873 AcrB/AcrD/AcrF family HB366_03155 PF00072 Response regulator receiver domain HB366_03160 PF00072 Response regulator receiver domain HB366_03165 PF01584 CheW-like domain HB366_03170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HB366_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HB366_03175 PF01584 CheW-like domain HB366_03175 PF01627 Hpt domain HB366_03175 PF00072 Response regulator receiver domain HB366_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_03185 PF01546 Peptidase family M20/M25/M40 HB366_03185 PF07687 Peptidase dimerisation domain HB366_03190 PF08085 Entericidin EcnA/B family HB366_03200 PF04304 Protein of unknown function (DUF454) HB366_03205 PF17969 L,D-transpeptidase C-terminal domain HB366_03205 PF03734 L,D-transpeptidase catalytic domain HB366_03245 PF00667 FAD binding domain HB366_03245 PF00258 Flavodoxin HB366_03245 PF00175 Oxidoreductase NAD-binding domain HB366_03255 PF12805 FUSC-like inner membrane protein yccS HB366_03260 PF07690 Major Facilitator Superfamily HB366_03265 PF00881 Nitroreductase family HB366_03280 PF01235 Sodium:alanine symporter family HB366_03285 PF01734 Patatin-like phospholipase HB366_03290 PF13291 ACT domain HB366_03290 PF00291 Pyridoxal-phosphate dependent enzyme HB366_03295 PF05992 SbmA/BacA-like family HB366_03335 PF02934 GatB/GatE catalytic domain HB366_03335 PF02637 GatB domain HB366_03340 PF01425 Amidase HB366_03345 PF02686 Glu-tRNAGln amidotransferase C subunit HB366_03355 PF04085 rod shape-determining protein MreC HB366_03360 PF04093 rod shape-determining protein MreD HB366_03365 PF02545 Maf-like protein HB366_03370 PF00575 S1 RNA binding domain HB366_03370 PF10150 Ribonuclease E/G family HB366_03380 PF06974 Protein of unknown function (DUF1298) HB366_03380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HB366_03385 PF01507 Phosphoadenosine phosphosulfate reductase family HB366_03400 PF02525 Flavodoxin-like fold HB366_03420 PF02673 Bacitracin resistance protein BacA HB366_03425 PF06719 AraC-type transcriptional regulator N-terminus HB366_03425 PF12833 Helix-turn-helix domain HB366_03430 PF00550 Phosphopantetheine attachment site HB366_03430 PF16197 Ketoacyl-synthetase C-terminal extension HB366_03430 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_03430 PF08990 Erythronolide synthase docking HB366_03430 PF08659 KR domain HB366_03430 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_03430 PF14765 Polyketide synthase dehydratase HB366_03430 PF00698 Acyl transferase domain HB366_03430 PF08240 Alcohol dehydrogenase GroES-like domain HB366_03430 PF09277 Erythronolide synthase, docking HB366_03435 PF01965 DJ-1/PfpI family HB366_03445 PF00324 Amino acid permease HB366_03450 PF04303 PrpF protein HB366_03455 PF00348 Polyprenyl synthetase HB366_03460 PF04237 YjbR HB366_03465 PF01145 SPFH domain / Band 7 family HB366_03475 PF01734 Patatin-like phospholipase HB366_03495 PF08019 Phosphoethanolamine transferase EptA/EptB HB366_03495 PF00884 Sulfatase HB366_03500 PF00072 Response regulator receiver domain HB366_03500 PF00486 Transcriptional regulatory protein, C terminal HB366_03505 PF08521 Two-component sensor kinase N-terminal HB366_03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_03505 PF00512 His Kinase A (phospho-acceptor) domain HB366_03515 PF00909 Ammonium Transporter Family HB366_03520 PF03466 LysR substrate binding domain HB366_03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_03540 PF08264 Anticodon-binding domain of tRNA HB366_03540 PF00133 tRNA synthetases class I (I, L, M and V) HB366_03540 PF10458 Valyl tRNA synthetase tRNA binding arm HB366_03560 PF01906 Putative heavy-metal-binding HB366_03565 PF01906 Putative heavy-metal-binding HB366_03570 PF02321 Outer membrane efflux protein HB366_03575 PF00873 AcrB/AcrD/AcrF family HB366_03580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_03580 PF00529 HlyD membrane-fusion protein of T1SS HB366_03585 PF01569 PAP2 superfamily HB366_03595 PF00348 Polyprenyl synthetase HB366_03605 PF00829 Ribosomal prokaryotic L21 protein HB366_03610 PF01016 Ribosomal L27 protein HB366_03615 PF03548 Outer membrane lipoprotein carrier protein LolA HB366_03625 PF02403 Seryl-tRNA synthetase N-terminal domain HB366_03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HB366_03630 PF10414 Sirohaem synthase dimerisation region HB366_03630 PF14824 Sirohaem biosynthesis protein central HB366_03630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HB366_03635 PF00588 SpoU rRNA Methylase family HB366_03640 PF01638 HxlR-like helix-turn-helix HB366_03645 PF03358 NADPH-dependent FMN reductase HB366_03650 PF13520 Amino acid permease HB366_03655 PF00465 Iron-containing alcohol dehydrogenase HB366_03665 PF03099 Biotin/lipoate A/B protein ligase family HB366_03670 PF04359 Protein of unknown function (DUF493) HB366_03675 PF04539 Sigma-70 region 3 HB366_03675 PF04545 Sigma-70, region 4 HB366_03675 PF00140 Sigma-70 factor, region 1.2 HB366_03675 PF03979 Sigma-70 factor, region 1.1 HB366_03675 PF04546 Sigma-70, non-essential region HB366_03675 PF04542 Sigma-70 region 2 HB366_03705 PF00285 Citrate synthase, C-terminal domain HB366_03710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HB366_03715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HB366_03720 PF00890 FAD binding domain HB366_03720 PF02910 Fumarate reductase flavoprotein C-term HB366_03725 PF13085 2Fe-2S iron-sulfur cluster binding domain HB366_03740 PF16870 2-oxoglutarate dehydrogenase C-terminal HB366_03740 PF02779 Transketolase, pyrimidine binding domain HB366_03740 PF00676 Dehydrogenase E1 component HB366_03740 PF16078 2-oxoglutarate dehydrogenase N-terminus HB366_03745 PF02817 e3 binding domain HB366_03745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HB366_03745 PF00364 Biotin-requiring enzyme HB366_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_03750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB366_03755 PF00549 CoA-ligase HB366_03755 PF08442 ATP-grasp domain HB366_03760 PF00549 CoA-ligase HB366_03760 PF02629 CoA binding domain HB366_03765 PF00579 tRNA synthetases class I (W and Y) HB366_03770 PF05661 Protein of unknown function (DUF808) HB366_03775 PF04228 Putative neutral zinc metallopeptidase HB366_03780 PF00999 Sodium/hydrogen exchanger family HB366_03815 PF09587 Bacterial capsule synthesis protein PGA_cap HB366_03825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HB366_03830 PF00582 Universal stress protein family HB366_03835 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_03840 PF03449 Transcription elongation factor, N-terminal HB366_03840 PF01272 Transcription elongation factor, GreA/GreB, C-term HB366_03845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HB366_03845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB366_03845 PF02142 MGS-like domain HB366_03850 PF00117 Glutamine amidotransferase class-I HB366_03850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HB366_03865 PF01985 CRS1 / YhbY (CRM) domain HB366_03870 PF01728 FtsJ-like methyltransferase HB366_03875 PF17862 AAA+ lid domain HB366_03875 PF01434 Peptidase family M41 HB366_03875 PF00004 ATPase family associated with various cellular activities (AAA) HB366_03875 PF06480 FtsH Extracellular HB366_03880 PF00809 Pterin binding enzyme HB366_03900 PF09423 PhoD-like phosphatase HB366_03900 PF16655 PhoD-like phosphatase, N-terminal domain HB366_03915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HB366_03915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HB366_03930 PF00083 Sugar (and other) transporter HB366_03935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HB366_03935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HB366_03940 PF01266 FAD dependent oxidoreductase HB366_03940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HB366_03945 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HB366_03945 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HB366_03950 PF00781 Diacylglycerol kinase catalytic domain HB366_03955 PF00149 Calcineurin-like phosphoesterase HB366_03965 PF00166 Chaperonin 10 Kd subunit HB366_03970 PF00118 TCP-1/cpn60 chaperonin family HB366_03975 PF01219 Prokaryotic diacylglycerol kinase HB366_03985 PF03009 Glycerophosphoryl diester phosphodiesterase family HB366_03990 PF00873 AcrB/AcrD/AcrF family HB366_04000 PF01435 Peptidase family M48 HB366_04005 PF01464 Transglycosylase SLT domain HB366_04010 PF01171 PP-loop family HB366_04020 PF01464 Transglycosylase SLT domain HB366_04020 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB366_04025 PF01272 Transcription elongation factor, GreA/GreB, C-term HB366_04025 PF03449 Transcription elongation factor, N-terminal HB366_04040 PF00668 Condensation domain HB366_04040 PF13193 AMP-binding enzyme C-terminal domain HB366_04040 PF00975 Thioesterase domain HB366_04040 PF00550 Phosphopantetheine attachment site HB366_04040 PF00501 AMP-binding enzyme HB366_04065 PF00881 Nitroreductase family HB366_04080 PF02595 Glycerate kinase family HB366_04085 PF00384 Molybdopterin oxidoreductase HB366_04090 PF02634 FdhD/NarQ family HB366_04095 PF06803 Protein of unknown function (DUF1232) HB366_04100 PF11890 Domain of unknown function (DUF3410) HB366_04100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB366_04100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB366_04105 PF00152 tRNA synthetases class II (D, K and N) HB366_04115 PF18073 Rubredoxin metal binding domain HB366_04120 PF00324 Amino acid permease HB366_04130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HB366_04130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HB366_04135 PF01678 Diaminopimelate epimerase HB366_04140 PF01810 LysE type translocator HB366_04145 PF00589 Phage integrase family HB366_04145 PF02899 Phage integrase, N-terminal SAM-like domain HB366_04150 PF01012 Electron transfer flavoprotein domain HB366_04155 PF00766 Electron transfer flavoprotein FAD-binding domain HB366_04155 PF01012 Electron transfer flavoprotein domain HB366_04160 PF00521 DNA gyrase/topoisomerase IV, subunit A HB366_04160 PF03989 DNA gyrase C-terminal domain, beta-propeller HB366_04175 PF00535 Glycosyl transferase family 2 HB366_04195 PF13533 Biotin-lipoyl like HB366_04205 PF00266 Aminotransferase class-V HB366_04220 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HB366_04230 PF02687 FtsX-like permease family HB366_04230 PF12704 MacB-like periplasmic core domain HB366_04235 PF00005 ABC transporter HB366_04240 PF00753 Metallo-beta-lactamase superfamily HB366_04240 PF13567 Domain of unknown function (DUF4131) HB366_04240 PF03772 Competence protein HB366_04250 PF06965 Na+/H+ antiporter 1 HB366_04250 PF01343 Peptidase family S49 HB366_04255 PF12697 Alpha/beta hydrolase family HB366_04260 PF00551 Formyl transferase HB366_04265 PF00586 AIR synthase related protein, N-terminal domain HB366_04265 PF02769 AIR synthase related protein, C-terminal domain HB366_04270 PF01594 AI-2E family transporter HB366_04275 PF00308 Bacterial dnaA protein HB366_04275 PF08299 Bacterial dnaA protein helix-turn-helix HB366_04275 PF11638 DnaA N-terminal domain HB366_04315 PF00588 SpoU rRNA Methylase family HB366_04315 PF08032 RNA 2'-O ribose methyltransferase substrate binding HB366_04320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HB366_04330 PF00691 OmpA family HB366_04335 PF04052 TolB amino-terminal domain HB366_04335 PF07676 WD40-like Beta Propeller Repeat HB366_04345 PF02472 Biopolymer transport protein ExbD/TolR HB366_04350 PF01618 MotA/TolQ/ExbB proton channel family HB366_04355 PF03061 Thioesterase superfamily HB366_04360 PF01546 Peptidase family M20/M25/M40 HB366_04360 PF07687 Peptidase dimerisation domain HB366_04365 PF05491 RuvB C-terminal winged helix domain HB366_04365 PF17864 RuvB AAA lid domain HB366_04365 PF05496 Holliday junction DNA helicase RuvB P-loop domain HB366_04370 PF01330 RuvA N terminal domain HB366_04370 PF07499 RuvA, C-terminal domain HB366_04375 PF01966 HD domain HB366_04380 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HB366_04380 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HB366_04380 PF02769 AIR synthase related protein, C-terminal domain HB366_04385 PF07690 Major Facilitator Superfamily HB366_04390 PF01784 NIF3 (NGG1p interacting factor 3) HB366_04395 PF00378 Enoyl-CoA hydratase/isomerase HB366_04400 PF00293 NUDIX domain HB366_04400 PF01467 Cytidylyltransferase-like HB366_04410 PF00578 AhpC/TSA family HB366_04425 PF06508 Queuosine biosynthesis protein QueC HB366_04435 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_04435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HB366_04435 PF14602 Hexapeptide repeat of succinyl-transferase HB366_04445 PF03466 LysR substrate binding domain HB366_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_04450 PF00005 ABC transporter HB366_04450 PF12857 TOBE-like domain HB366_04455 PF00528 Binding-protein-dependent transport system inner membrane component HB366_04460 PF00528 Binding-protein-dependent transport system inner membrane component HB366_04475 PF01063 Amino-transferase class IV HB366_04480 PF02618 YceG-like family HB366_04485 PF02223 Thymidylate kinase HB366_04495 PF00890 FAD binding domain HB366_04495 PF02910 Fumarate reductase flavoprotein C-term HB366_04500 PF13180 PDZ domain HB366_04510 PF06421 GTP-binding protein LepA C-terminus HB366_04510 PF00679 Elongation factor G C-terminus HB366_04510 PF03144 Elongation factor Tu domain 2 HB366_04510 PF00009 Elongation factor Tu GTP binding domain HB366_04515 PF10502 Signal peptidase, peptidase S26 HB366_04525 PF00035 Double-stranded RNA binding motif HB366_04525 PF14622 Ribonuclease-III-like HB366_04530 PF07650 KH domain HB366_04530 PF01926 50S ribosome-binding GTPase HB366_04540 PF02565 Recombination protein O C terminal HB366_04540 PF11967 Recombination protein O N terminal HB366_04545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HB366_04550 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HB366_04555 PF00106 short chain dehydrogenase HB366_04585 PF00155 Aminotransferase class I and II HB366_04595 PF00990 Diguanylate cyclase, GGDEF domain HB366_04595 PF17151 Periplasmic sensor domain HB366_04605 PF17757 UvrB interaction domain HB366_04605 PF00271 Helicase conserved C-terminal domain HB366_04605 PF04851 Type III restriction enzyme, res subunit HB366_04605 PF12344 Ultra-violet resistance protein B HB366_04605 PF02151 UvrB/uvrC motif HB366_04615 PF00892 EamA-like transporter family HB366_04620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HB366_04620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HB366_04635 PF01018 GTP1/OBG HB366_04635 PF01926 50S ribosome-binding GTPase HB366_04640 PF00696 Amino acid kinase family HB366_04640 PF01472 PUA domain HB366_04650 PF07759 Protein of unknown function (DUF1615) HB366_04655 PF01207 Dihydrouridine synthase (Dus) HB366_04660 PF03060 Nitronate monooxygenase HB366_04675 PF02350 UDP-N-acetylglucosamine 2-epimerase HB366_04705 PF03441 FAD binding domain of DNA photolyase HB366_04705 PF00875 DNA photolyase HB366_04710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB366_04715 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_04720 PF07943 Penicillin-binding protein 5, C-terminal domain HB366_04720 PF00768 D-alanyl-D-alanine carboxypeptidase HB366_04730 PF03971 Monomeric isocitrate dehydrogenase HB366_04735 PF00849 RNA pseudouridylate synthase HB366_04740 PF00180 Isocitrate/isopropylmalate dehydrogenase HB366_04760 PF06779 Uncharacterised MFS-type transporter YbfB HB366_04765 PF03466 LysR substrate binding domain HB366_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_04775 PF02567 Phenazine biosynthesis-like protein HB366_04780 PF00675 Insulinase (Peptidase family M16) HB366_04780 PF05193 Peptidase M16 inactive domain HB366_04805 PF02581 Thiamine monophosphate synthase HB366_04810 PF00202 Aminotransferase class-III HB366_04820 PF00849 RNA pseudouridylate synthase HB366_04825 PF18337 RapA N-terminal Tudor like domain HB366_04825 PF12137 RNA polymerase recycling family C-terminal HB366_04825 PF00271 Helicase conserved C-terminal domain HB366_04825 PF00176 SNF2 family N-terminal domain HB366_04825 PF18339 RapA N-terminal Tudor like domain 1 HB366_04835 PF00440 Bacterial regulatory proteins, tetR family HB366_04840 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_04840 PF00175 Oxidoreductase NAD-binding domain HB366_04840 PF00970 Oxidoreductase FAD-binding domain HB366_04845 PF00487 Fatty acid desaturase HB366_04855 PF00440 Bacterial regulatory proteins, tetR family HB366_04855 PF17754 MftR C-terminal domain HB366_04865 PF00202 Aminotransferase class-III HB366_04870 PF00282 Pyridoxal-dependent decarboxylase conserved domain HB366_04875 PF00171 Aldehyde dehydrogenase family HB366_04880 PF01037 Lrp/AsnC ligand binding domain HB366_04885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HB366_04885 PF00205 Thiamine pyrophosphate enzyme, central domain HB366_04885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HB366_04890 PF00324 Amino acid permease HB366_04895 PF12849 PBP superfamily domain HB366_04900 PF00528 Binding-protein-dependent transport system inner membrane component HB366_04905 PF00528 Binding-protein-dependent transport system inner membrane component HB366_04910 PF00005 ABC transporter HB366_04915 PF01343 Peptidase family S49 HB366_04915 PF08496 Peptidase family S49 N-terminal HB366_04925 PF00872 Transposase, Mutator family HB366_04935 PF08328 Adenylosuccinate lyase C-terminal HB366_04935 PF00206 Lyase HB366_04940 PF04356 Protein of unknown function (DUF489) HB366_04950 PF13344 Haloacid dehalogenase-like hydrolase HB366_04950 PF00293 NUDIX domain HB366_04955 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_04960 PF00768 D-alanyl-D-alanine carboxypeptidase HB366_04960 PF07943 Penicillin-binding protein 5, C-terminal domain HB366_04975 PF01975 Survival protein SurE HB366_04980 PF01476 LysM domain HB366_04980 PF01551 Peptidase family M23 HB366_04985 PF03466 LysR substrate binding domain HB366_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_04990 PF05362 Lon protease (S16) C-terminal proteolytic domain HB366_04990 PF13654 AAA domain HB366_04995 PF07690 Major Facilitator Superfamily HB366_05000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB366_05005 PF13593 SBF-like CPA transporter family (DUF4137) HB366_05010 PF01197 Ribosomal protein L31 HB366_05025 PF04055 Radical SAM superfamily HB366_05030 PF01132 Elongation factor P (EF-P) OB domain HB366_05030 PF08207 Elongation factor P (EF-P) KOW-like domain HB366_05030 PF09285 Elongation factor P, C-terminal HB366_05035 PF02554 Carbon starvation protein CstA HB366_05035 PF13722 5TM C-terminal transporter carbon starvation CstA HB366_05040 PF04328 Selenoprotein, putative HB366_05075 PF17853 GGDEF-like domain HB366_05075 PF06018 CodY GAF-like domain HB366_05075 PF13556 PucR C-terminal helix-turn-helix domain HB366_05090 PF00171 Aldehyde dehydrogenase family HB366_05095 PF00324 Amino acid permease HB366_05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_05100 PF03466 LysR substrate binding domain HB366_05105 PF02028 BCCT, betaine/carnitine/choline family transporter HB366_05110 PF02028 BCCT, betaine/carnitine/choline family transporter HB366_05115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB366_05115 PF00355 Rieske [2Fe-2S] domain HB366_05120 PF00171 Aldehyde dehydrogenase family HB366_05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_05125 PF18113 Rubredoxin binding C-terminal domain HB366_05130 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HB366_05130 PF01266 FAD dependent oxidoreductase HB366_05150 PF00892 EamA-like transporter family HB366_05160 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HB366_05165 PF00083 Sugar (and other) transporter HB366_05170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HB366_05170 PF13378 Enolase C-terminal domain-like HB366_05175 PF09277 Erythronolide synthase, docking HB366_05175 PF08990 Erythronolide synthase docking HB366_05175 PF08240 Alcohol dehydrogenase GroES-like domain HB366_05175 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_05175 PF16197 Ketoacyl-synthetase C-terminal extension HB366_05175 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_05175 PF00698 Acyl transferase domain HB366_05175 PF14765 Polyketide synthase dehydratase HB366_05175 PF00550 Phosphopantetheine attachment site HB366_05175 PF08659 KR domain HB366_05180 PF00440 Bacterial regulatory proteins, tetR family HB366_05200 PF02678 Pirin HB366_05200 PF17954 Quercetinase C-terminal cupin domain HB366_05210 PF08348 YheO-like PAS domain HB366_05210 PF13309 HTH domain HB366_05220 PF00668 Condensation domain HB366_05220 PF00550 Phosphopantetheine attachment site HB366_05220 PF00501 AMP-binding enzyme HB366_05220 PF13193 AMP-binding enzyme C-terminal domain HB366_05225 PF00501 AMP-binding enzyme HB366_05225 PF13193 AMP-binding enzyme C-terminal domain HB366_05225 PF00668 Condensation domain HB366_05225 PF00550 Phosphopantetheine attachment site HB366_05225 PF00975 Thioesterase domain HB366_05230 PF01032 FecCD transport family HB366_05235 PF01032 FecCD transport family HB366_05240 PF00005 ABC transporter HB366_05245 PF01497 Periplasmic binding protein HB366_05250 PF00593 TonB dependent receptor HB366_05250 PF07715 TonB-dependent Receptor Plug Domain HB366_05255 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HB366_05260 PF00501 AMP-binding enzyme HB366_05260 PF00668 Condensation domain HB366_05260 PF00550 Phosphopantetheine attachment site HB366_05265 PF13193 AMP-binding enzyme C-terminal domain HB366_05265 PF00501 AMP-binding enzyme HB366_05270 PF00550 Phosphopantetheine attachment site HB366_05270 PF00857 Isochorismatase family HB366_05275 PF00282 Pyridoxal-dependent decarboxylase conserved domain HB366_05285 PF00005 ABC transporter HB366_05285 PF00664 ABC transporter transmembrane region HB366_05290 PF00664 ABC transporter transmembrane region HB366_05290 PF00005 ABC transporter HB366_05295 PF00975 Thioesterase domain HB366_05305 PF00425 chorismate binding enzyme HB366_05315 PF01208 Uroporphyrinogen decarboxylase (URO-D) HB366_05345 PF00144 Beta-lactamase HB366_05360 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_05360 PF01799 [2Fe-2S] binding domain HB366_05365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HB366_05365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HB366_05380 PF00218 Indole-3-glycerol phosphate synthase HB366_05385 PF00591 Glycosyl transferase family, a/b domain HB366_05385 PF02885 Glycosyl transferase family, helical bundle domain HB366_05390 PF00593 TonB dependent receptor HB366_05390 PF07715 TonB-dependent Receptor Plug Domain HB366_05395 PF01433 Peptidase family M1 domain HB366_05395 PF11838 ERAP1-like C-terminal domain HB366_05400 PF00117 Glutamine amidotransferase class-I HB366_05410 PF00854 POT family HB366_05415 PF00120 Glutamine synthetase, catalytic domain HB366_05415 PF03951 Glutamine synthetase, beta-Grasp domain HB366_05420 PF04345 Chorismate lyase HB366_05425 PF01040 UbiA prenyltransferase family HB366_05460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HB366_05460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HB366_05465 PF01784 NIF3 (NGG1p interacting factor 3) HB366_05470 PF13180 PDZ domain HB366_05475 PF01743 Poly A polymerase head domain HB366_05475 PF12627 Probable RNA and SrmB- binding site of polymerase A HB366_05480 PF01515 Phosphate acetyl/butaryl transferase HB366_05480 PF03949 Malic enzyme, NAD binding domain HB366_05480 PF00390 Malic enzyme, N-terminal domain HB366_05485 PF03707 Bacterial signalling protein N terminal repeat HB366_05485 PF00990 Diguanylate cyclase, GGDEF domain HB366_05485 PF00563 EAL domain HB366_05490 PF04452 RNA methyltransferase HB366_05495 PF02219 Methylenetetrahydrofolate reductase HB366_05500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HB366_05500 PF05221 S-adenosyl-L-homocysteine hydrolase HB366_05515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_05515 PF09317 Domain of unknown function (DUF1974) HB366_05515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_05520 PF04055 Radical SAM superfamily HB366_05525 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_05525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB366_05535 PF07690 Major Facilitator Superfamily HB366_05545 PF00557 Metallopeptidase family M24 HB366_05550 PF00318 Ribosomal protein S2 HB366_05555 PF00889 Elongation factor TS HB366_05565 PF12833 Helix-turn-helix domain HB366_05585 PF05036 Sporulation related domain HB366_05585 PF03330 Lytic transglycolase HB366_05590 PF13406 Transglycosylase SLT domain HB366_05595 PF01098 Cell cycle protein HB366_05615 PF14489 QueF-like protein HB366_05615 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HB366_05620 PF01061 ABC-2 type transporter HB366_05625 PF00005 ABC transporter HB366_05655 PF00464 Serine hydroxymethyltransferase HB366_05660 PF02321 Outer membrane efflux protein HB366_05665 PF00873 AcrB/AcrD/AcrF family HB366_05670 PF13533 Biotin-lipoyl like HB366_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_05675 PF03466 LysR substrate binding domain HB366_05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB366_05685 PF00528 Binding-protein-dependent transport system inner membrane component HB366_05690 PF00528 Binding-protein-dependent transport system inner membrane component HB366_05695 PF00005 ABC transporter HB366_05700 PF00893 Small Multidrug Resistance protein HB366_05705 PF00037 4Fe-4S binding domain HB366_05715 PF00155 Aminotransferase class I and II HB366_05715 PF00392 Bacterial regulatory proteins, gntR family HB366_05720 PF02567 Phenazine biosynthesis-like protein HB366_05725 PF00970 Oxidoreductase FAD-binding domain HB366_05725 PF00175 Oxidoreductase NAD-binding domain HB366_05730 PF01980 tRNA-methyltransferase O HB366_05730 PF18389 TrmO C-terminal domain HB366_05740 PF00437 Type II/IV secretion system protein HB366_05750 PF00072 Response regulator receiver domain HB366_05750 PF00486 Transcriptional regulatory protein, C terminal HB366_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_05755 PF08521 Two-component sensor kinase N-terminal HB366_05755 PF00512 His Kinase A (phospho-acceptor) domain HB366_05765 PF00293 NUDIX domain HB366_05775 PF14814 Bifunctional transglycosylase second domain HB366_05775 PF00905 Penicillin binding protein transpeptidase domain HB366_05775 PF00912 Transglycosylase HB366_05780 PF01513 ATP-NAD kinase HB366_05785 PF07023 Protein of unknown function (DUF1315) HB366_05790 PF02885 Glycosyl transferase family, helical bundle domain HB366_05790 PF00591 Glycosyl transferase family, a/b domain HB366_05795 PF00375 Sodium:dicarboxylate symporter family HB366_05800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_05800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_05800 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_05805 PF00756 Putative esterase HB366_05810 PF01842 ACT domain HB366_05810 PF01817 Chorismate mutase type II HB366_05810 PF00800 Prephenate dehydratase HB366_05815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HB366_05825 PF01546 Peptidase family M20/M25/M40 HB366_05825 PF07687 Peptidase dimerisation domain HB366_05830 PF12706 Beta-lactamase superfamily domain HB366_05840 PF03883 Peroxide stress protein YaaA HB366_05850 PF05690 Thiazole biosynthesis protein ThiG HB366_05860 PF04241 Protein of unknown function (DUF423) HB366_05865 PF04542 Sigma-70 region 2 HB366_05865 PF04545 Sigma-70, region 4 HB366_05865 PF00140 Sigma-70 factor, region 1.2 HB366_05875 PF00313 'Cold-shock' DNA-binding domain HB366_05880 PF00270 DEAD/DEAH box helicase HB366_05880 PF00271 Helicase conserved C-terminal domain HB366_05890 PF00881 Nitroreductase family HB366_05895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HB366_05895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HB366_05915 PF01180 Dihydroorotate dehydrogenase HB366_05920 PF02674 Colicin V production protein HB366_05925 PF00156 Phosphoribosyl transferase domain HB366_05940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB366_05940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB366_05945 PF01435 Peptidase family M48 HB366_05950 PF09424 Yqey-like protein HB366_05955 PF01165 Ribosomal protein S21 HB366_05960 PF00814 Glycoprotease family HB366_05980 PF00069 Protein kinase domain HB366_06005 PF03466 LysR substrate binding domain HB366_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_06010 PF00202 Aminotransferase class-III HB366_06015 PF00171 Aldehyde dehydrogenase family HB366_06020 PF00324 Amino acid permease HB366_06050 PF04076 Bacterial OB fold (BOF) protein HB366_06075 PF00561 alpha/beta hydrolase fold HB366_06080 PF03616 Sodium/glutamate symporter HB366_06090 PF00392 Bacterial regulatory proteins, gntR family HB366_06090 PF07729 FCD domain HB366_06140 PF00083 Sugar (and other) transporter HB366_06140 PF08946 Osmosensory transporter coiled coil HB366_06160 PF00155 Aminotransferase class I and II HB366_06165 PF06826 Predicted Permease Membrane Region HB366_06165 PF02080 TrkA-C domain HB366_06175 PF04403 Paraquat-inducible protein A HB366_06180 PF02470 MlaD protein HB366_06195 PF07091 Ribosomal RNA methyltransferase (FmrO) HB366_06220 PF01636 Phosphotransferase enzyme family HB366_06225 PF13610 DDE domain HB366_06240 PF00375 Sodium:dicarboxylate symporter family HB366_06250 PF16123 Hydroxyacylglutathione hydrolase C-terminus HB366_06250 PF00753 Metallo-beta-lactamase superfamily HB366_06255 PF00528 Binding-protein-dependent transport system inner membrane component HB366_06260 PF00005 ABC transporter HB366_06260 PF09383 NIL domain HB366_06265 PF03180 NLPA lipoprotein HB366_06270 PF02844 Phosphoribosylglycinamide synthetase, N domain HB366_06270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HB366_06270 PF02843 Phosphoribosylglycinamide synthetase, C domain HB366_06275 PF02142 MGS-like domain HB366_06275 PF01808 AICARFT/IMPCHase bienzyme HB366_06280 PF02954 Bacterial regulatory protein, Fis family HB366_06300 PF13932 GidA associated domain HB366_06300 PF01134 Glucose inhibited division protein A HB366_06310 PF14403 Circularly permuted ATP-grasp type 2 HB366_06320 PF01841 Transglutaminase-like superfamily HB366_06320 PF08379 Bacterial transglutaminase-like N-terminal region HB366_06330 PF00842 Alanine racemase, C-terminal domain HB366_06330 PF01168 Alanine racemase, N-terminal domain HB366_06335 PF00772 DnaB-like helicase N terminal domain HB366_06335 PF03796 DnaB-like helicase C terminal domain HB366_06340 PF03948 Ribosomal protein L9, C-terminal domain HB366_06340 PF01281 Ribosomal protein L9, N-terminal domain HB366_06345 PF01084 Ribosomal protein S18 HB366_06350 PF01250 Ribosomal protein S6 HB366_06355 PF01040 UbiA prenyltransferase family HB366_06360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HB366_06365 PF00510 Cytochrome c oxidase subunit III HB366_06370 PF00115 Cytochrome C and Quinol oxidase polypeptide I HB366_06375 PF06481 COX Aromatic Rich Motif HB366_06375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HB366_06385 PF00391 PEP-utilising enzyme, mobile domain HB366_06385 PF02896 PEP-utilising enzyme, TIM barrel domain HB366_06385 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HB366_06390 PF03618 Kinase/pyrophosphorylase HB366_06400 PF01522 Polysaccharide deacetylase HB366_06400 PF14883 Hypothetical glycosyl hydrolase family 13 HB366_06405 PF00535 Glycosyl transferase family 2 HB366_06410 PF13994 PgaD-like protein HB366_06420 PF00296 Luciferase-like monooxygenase HB366_06435 PF03466 LysR substrate binding domain HB366_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_06445 PF00472 RF-1 domain HB366_06445 PF03462 PCRF domain HB366_06450 PF13847 Methyltransferase domain HB366_06450 PF17827 PrmC N-terminal domain HB366_06455 PF00528 Binding-protein-dependent transport system inner membrane component HB366_06460 PF09084 NMT1/THI5 like HB366_06465 PF12833 Helix-turn-helix domain HB366_06470 PF00106 short chain dehydrogenase HB366_06475 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_06475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_06475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_06480 PF13193 AMP-binding enzyme C-terminal domain HB366_06480 PF00501 AMP-binding enzyme HB366_06485 PF01613 Flavin reductase like domain HB366_06490 PF00899 ThiF family HB366_06495 PF03109 ABC1 family HB366_06510 PF03814 Potassium-transporting ATPase A subunit HB366_06520 PF02669 K+-transporting ATPase, c chain HB366_06525 PF13493 Domain of unknown function (DUF4118) HB366_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_06525 PF00512 His Kinase A (phospho-acceptor) domain HB366_06525 PF02702 Osmosensitive K+ channel His kinase sensor domain HB366_06530 PF00072 Response regulator receiver domain HB366_06530 PF00486 Transcriptional regulatory protein, C terminal HB366_06535 PF00120 Glutamine synthetase, catalytic domain HB366_06545 PF03232 Ubiquinone biosynthesis protein COQ7 HB366_06550 PF07690 Major Facilitator Superfamily HB366_06555 PF01103 Surface antigen HB366_06555 PF17243 POTRA domain TamA domain 1 HB366_06555 PF07244 Surface antigen variable number repeat HB366_06570 PF11791 Aconitate B N-terminal domain HB366_06570 PF06434 Aconitate hydratase 2 N-terminus HB366_06570 PF00330 Aconitase family (aconitate hydratase) HB366_06580 PF00027 Cyclic nucleotide-binding domain HB366_06580 PF00520 Ion transport protein HB366_06585 PF07690 Major Facilitator Superfamily HB366_06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_06600 PF03466 LysR substrate binding domain HB366_06605 PF04284 Protein of unknown function (DUF441) HB366_06615 PF00849 RNA pseudouridylate synthase HB366_06615 PF01479 S4 domain HB366_06630 PF00849 RNA pseudouridylate synthase HB366_06630 PF01479 S4 domain HB366_06635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HB366_06640 PF08676 MutL C terminal dimerisation domain HB366_06640 PF01119 DNA mismatch repair protein, C-terminal domain HB366_06650 PF17209 Hfq protein HB366_06660 PF00881 Nitroreductase family HB366_06670 PF00149 Calcineurin-like phosphoesterase HB366_06675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HB366_06680 PF00749 tRNA synthetases class I (E and Q), catalytic domain HB366_06680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HB366_06685 PF00958 GMP synthase C terminal domain HB366_06685 PF00117 Glutamine amidotransferase class-I HB366_06685 PF02540 NAD synthase HB366_06690 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HB366_06695 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HB366_06700 PF13520 Amino acid permease HB366_06705 PF00171 Aldehyde dehydrogenase family HB366_06720 PF00465 Iron-containing alcohol dehydrogenase HB366_06725 PF05970 PIF1-like helicase HB366_06725 PF14493 Helix-turn-helix domain HB366_06735 PF06445 GyrI-like small molecule binding domain HB366_06740 PF02110 Hydroxyethylthiazole kinase family HB366_06755 PF11940 Domain of unknown function (DUF3458) Ig-like fold HB366_06755 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HB366_06755 PF01433 Peptidase family M1 domain HB366_06785 PF01817 Chorismate mutase type II HB366_06790 PF01037 Lrp/AsnC ligand binding domain HB366_06800 PF00440 Bacterial regulatory proteins, tetR family HB366_06805 PF07715 TonB-dependent Receptor Plug Domain HB366_06805 PF00593 TonB dependent receptor HB366_06810 PF00924 Mechanosensitive ion channel HB366_06845 PF07715 TonB-dependent Receptor Plug Domain HB366_06845 PF00593 TonB dependent receptor HB366_06865 PF12848 ABC transporter HB366_06865 PF00005 ABC transporter HB366_06870 PF00582 Universal stress protein family HB366_06895 PF00690 Cation transporter/ATPase, N-terminus HB366_06895 PF00689 Cation transporting ATPase, C-terminus HB366_06900 PF02308 MgtC family HB366_06905 PF03594 Benzoate membrane transport protein HB366_06910 PF01037 Lrp/AsnC ligand binding domain HB366_06915 PF01810 LysE type translocator HB366_06920 PF00923 Transaldolase/Fructose-6-phosphate aldolase HB366_06925 PF03466 LysR substrate binding domain HB366_06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_06935 PF02803 Thiolase, C-terminal domain HB366_06935 PF00108 Thiolase, N-terminal domain HB366_06945 PF01575 MaoC like domain HB366_06960 PF07690 Major Facilitator Superfamily HB366_06965 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HB366_06965 PF12170 DNA polymerase III tau subunit V interacting with alpha HB366_06965 PF12169 DNA polymerase III subunits gamma and tau domain III HB366_06970 PF04185 Phosphoesterase family HB366_06970 PF05506 Domain of unknown function (DUF756) HB366_06975 PF03061 Thioesterase superfamily HB366_06980 PF00465 Iron-containing alcohol dehydrogenase HB366_06990 PF01451 Low molecular weight phosphotyrosine protein phosphatase HB366_06995 PF01565 FAD binding domain HB366_06995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HB366_07010 PF01645 Conserved region in glutamate synthase HB366_07080 PF12161 HsdM N-terminal domain HB366_07080 PF02384 N-6 DNA Methylase HB366_07110 PF01555 DNA methylase HB366_07295 PF01551 Peptidase family M23 HB366_07295 PF01476 LysM domain HB366_07295 PF08525 Opacity-associated protein A N-terminal motif HB366_07360 PF12832 MFS_1 like family HB366_07370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB366_07370 PF00289 Biotin carboxylase, N-terminal domain HB366_07370 PF02785 Biotin carboxylase C-terminal domain HB366_07375 PF00364 Biotin-requiring enzyme HB366_07380 PF01220 Dehydroquinase class II HB366_07385 PF11799 impB/mucB/samB family C-terminal domain HB366_07385 PF00817 impB/mucB/samB family HB366_07385 PF13438 Domain of unknown function (DUF4113) HB366_07395 PF00005 ABC transporter HB366_07400 PF00072 Response regulator receiver domain HB366_07400 PF00486 Transcriptional regulatory protein, C terminal HB366_07410 PF18267 Rubredoxin NAD+ reductase C-terminal domain HB366_07410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HB366_07410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HB366_07410 PF13806 Rieske-like [2Fe-2S] domain HB366_07410 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_07410 PF04324 BFD-like [2Fe-2S] binding domain HB366_07415 PF04324 BFD-like [2Fe-2S] binding domain HB366_07415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HB366_07415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HB366_07415 PF18267 Rubredoxin NAD+ reductase C-terminal domain HB366_07415 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_07420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HB366_07420 PF04324 BFD-like [2Fe-2S] binding domain HB366_07420 PF01568 Molydopterin dinucleotide binding domain HB366_07420 PF00384 Molybdopterin oxidoreductase HB366_07425 PF12804 MobA-like NTP transferase domain HB366_07430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HB366_07430 PF00384 Molybdopterin oxidoreductase HB366_07430 PF01568 Molydopterin dinucleotide binding domain HB366_07435 PF06463 Molybdenum Cofactor Synthesis C HB366_07435 PF04055 Radical SAM superfamily HB366_07445 PF02391 MoaE protein HB366_07450 PF00994 Probable molybdopterin binding domain HB366_07450 PF01967 MoaC family HB366_07455 PF00994 Probable molybdopterin binding domain HB366_07455 PF03454 MoeA C-terminal region (domain IV) HB366_07455 PF03453 MoeA N-terminal region (domain I and II) HB366_07460 PF01638 HxlR-like helix-turn-helix HB366_07465 PF00392 Bacterial regulatory proteins, gntR family HB366_07465 PF00155 Aminotransferase class I and II HB366_07470 PF00892 EamA-like transporter family HB366_07490 PF02635 DsrE/DsrF-like family HB366_07495 PF16363 GDP-mannose 4,6 dehydratase HB366_07500 PF10415 Fumarase C C-terminus HB366_07500 PF00206 Lyase HB366_07520 PF01266 FAD dependent oxidoreductase HB366_07530 PF02542 YgbB family HB366_07540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HB366_07540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HB366_07560 PF00158 Sigma-54 interaction domain HB366_07560 PF02954 Bacterial regulatory protein, Fis family HB366_07560 PF00072 Response regulator receiver domain HB366_07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_07565 PF00512 His Kinase A (phospho-acceptor) domain HB366_07565 PF00989 PAS fold HB366_07570 PF00919 Uncharacterized protein family UPF0004 HB366_07570 PF18693 TRAM domain HB366_07570 PF04055 Radical SAM superfamily HB366_07575 PF00696 Amino acid kinase family HB366_07580 PF01765 Ribosome recycling factor HB366_07585 PF01255 Putative undecaprenyl diphosphate synthase HB366_07595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HB366_07595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HB366_07595 PF13288 DXP reductoisomerase C-terminal domain HB366_07600 PF02163 Peptidase family M50 HB366_07600 PF17820 PDZ domain HB366_07600 PF13180 PDZ domain HB366_07605 PF01103 Surface antigen HB366_07605 PF07244 Surface antigen variable number repeat HB366_07615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HB366_07615 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_07620 PF07977 FabA-like domain HB366_07625 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_07625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HB366_07640 PF02631 RecX family HB366_07645 PF00154 recA bacterial DNA recombination protein HB366_07650 PF01479 S4 domain HB366_07655 PF13419 Haloacid dehalogenase-like hydrolase HB366_07680 PF01037 Lrp/AsnC ligand binding domain HB366_07685 PF00266 Aminotransferase class-V HB366_07690 PF00324 Amino acid permease HB366_07700 PF00082 Subtilase family HB366_07700 PF05922 Peptidase inhibitor I9 HB366_07705 PF00916 Sulfate permease family HB366_07705 PF01740 STAS domain HB366_07710 PF02586 SOS response associated peptidase (SRAP) HB366_07715 PF07995 Glucose / Sorbosone dehydrogenase HB366_07725 PF00563 EAL domain HB366_07725 PF03707 Bacterial signalling protein N terminal repeat HB366_07725 PF00990 Diguanylate cyclase, GGDEF domain HB366_07745 PF02378 Phosphotransferase system, EIIC HB366_07745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HB366_07750 PF00294 pfkB family carbohydrate kinase HB366_07755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HB366_07755 PF05524 PEP-utilising enzyme, N-terminal HB366_07755 PF00391 PEP-utilising enzyme, mobile domain HB366_07755 PF02896 PEP-utilising enzyme, TIM barrel domain HB366_07755 PF00381 PTS HPr component phosphorylation site HB366_07780 PF05525 Branched-chain amino acid transport protein HB366_07785 PF00557 Metallopeptidase family M24 HB366_07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_07790 PF03466 LysR substrate binding domain HB366_07800 PF00462 Glutaredoxin HB366_07805 PF00202 Aminotransferase class-III HB366_07810 PF00478 IMP dehydrogenase / GMP reductase domain HB366_07810 PF00571 CBS domain HB366_07835 PF02881 SRP54-type protein, helical bundle domain HB366_07835 PF00448 SRP54-type protein, GTPase domain HB366_07845 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HB366_07860 PF08173 Membrane bound YbgT-like protein HB366_07865 PF02322 Cytochrome bd terminal oxidase subunit II HB366_07870 PF01654 Cytochrome bd terminal oxidase subunit I HB366_07880 PF07290 Protein of unknown function (DUF1449) HB366_07890 PF00294 pfkB family carbohydrate kinase HB366_07895 PF07715 TonB-dependent Receptor Plug Domain HB366_07895 PF00593 TonB dependent receptor HB366_07900 PF08367 Peptidase M16C associated HB366_07900 PF05193 Peptidase M16 inactive domain HB366_07900 PF00675 Insulinase (Peptidase family M16) HB366_07905 PF02253 Phospholipase A1 HB366_07910 PF02386 Cation transport protein HB366_07915 PF02254 TrkA-N domain HB366_07915 PF02080 TrkA-C domain HB366_07920 PF00291 Pyridoxal-phosphate dependent enzyme HB366_07920 PF00585 C-terminal regulatory domain of Threonine dehydratase HB366_07925 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HB366_07940 PF02774 Semialdehyde dehydrogenase, dimerisation domain HB366_07940 PF01118 Semialdehyde dehydrogenase, NAD binding domain HB366_07950 PF02617 ATP-dependent Clp protease adaptor protein ClpS HB366_07955 PF00004 ATPase family associated with various cellular activities (AAA) HB366_07955 PF10431 C-terminal, D2-small domain, of ClpB protein HB366_07955 PF07724 AAA domain (Cdc48 subfamily) HB366_07955 PF17871 AAA lid domain HB366_07955 PF02861 Clp amino terminal domain, pathogenicity island component HB366_07960 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HB366_07965 PF00793 DAHP synthetase I family HB366_07980 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_07980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB366_08010 PF06418 CTP synthase N-terminus HB366_08010 PF00117 Glutamine amidotransferase class-I HB366_08015 PF00793 DAHP synthetase I family HB366_08020 PF03952 Enolase, N-terminal domain HB366_08020 PF00113 Enolase, C-terminal TIM barrel domain HB366_08025 PF04239 Protein of unknown function (DUF421) HB366_08030 PF04977 Septum formation initiator HB366_08035 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HB366_08040 PF01144 Coenzyme A transferase HB366_08045 PF01144 Coenzyme A transferase HB366_08050 PF02803 Thiolase, C-terminal domain HB366_08050 PF00108 Thiolase, N-terminal domain HB366_08055 PF00206 Lyase HB366_08055 PF10397 Adenylosuccinate lyase C-terminus HB366_08060 PF00561 alpha/beta hydrolase fold HB366_08065 PF07690 Major Facilitator Superfamily HB366_08070 PF02627 Carboxymuconolactone decarboxylase family HB366_08075 PF00775 Dioxygenase HB366_08075 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HB366_08080 PF00775 Dioxygenase HB366_08085 PF01487 Type I 3-dehydroquinase HB366_08090 PF05048 Periplasmic copper-binding protein (NosD) HB366_08095 PF04966 Carbohydrate-selective porin, OprB family HB366_08100 PF01011 PQQ enzyme repeat HB366_08100 PF13360 PQQ-like domain HB366_08110 PF04143 Sulphur transport HB366_08120 PF00753 Metallo-beta-lactamase superfamily HB366_08125 PF09339 IclR helix-turn-helix domain HB366_08125 PF01614 Bacterial transcriptional regulator HB366_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_08130 PF03466 LysR substrate binding domain HB366_08135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_08135 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_08135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_08150 PF00106 short chain dehydrogenase HB366_08160 PF07690 Major Facilitator Superfamily HB366_08170 PF01425 Amidase HB366_08175 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB366_08190 PF00355 Rieske [2Fe-2S] domain HB366_08190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB366_08205 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_08205 PF00175 Oxidoreductase NAD-binding domain HB366_08210 PF01613 Flavin reductase like domain HB366_08215 PF12833 Helix-turn-helix domain HB366_08215 PF02311 AraC-like ligand binding domain HB366_08220 PF07833 Copper amine oxidase N-terminal domain HB366_08220 PF02728 Copper amine oxidase, N3 domain HB366_08220 PF02727 Copper amine oxidase, N2 domain HB366_08220 PF01179 Copper amine oxidase, enzyme domain HB366_08230 PF00171 Aldehyde dehydrogenase family HB366_08235 PF01804 Penicillin amidase HB366_08240 PF12146 Serine aminopeptidase, S33 HB366_08245 PF00108 Thiolase, N-terminal domain HB366_08245 PF02803 Thiolase, C-terminal domain HB366_08250 PF01144 Coenzyme A transferase HB366_08255 PF01144 Coenzyme A transferase HB366_08260 PF00775 Dioxygenase HB366_08260 PF04444 Catechol dioxygenase N terminus HB366_08265 PF02426 Muconolactone delta-isomerase HB366_08270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HB366_08270 PF13378 Enolase C-terminal domain-like HB366_08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_08275 PF03466 LysR substrate binding domain HB366_08285 PF07729 FCD domain HB366_08285 PF00392 Bacterial regulatory proteins, gntR family HB366_08290 PF00920 Dehydratase family HB366_08295 PF07690 Major Facilitator Superfamily HB366_08305 PF00171 Aldehyde dehydrogenase family HB366_08325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_08325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_08325 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_08335 PF02954 Bacterial regulatory protein, Fis family HB366_08335 PF00158 Sigma-54 interaction domain HB366_08335 PF06506 Propionate catabolism activator HB366_08340 PF13193 AMP-binding enzyme C-terminal domain HB366_08340 PF00501 AMP-binding enzyme HB366_08345 PF04341 Protein of unknown function, DUF485 HB366_08350 PF00474 Sodium:solute symporter family HB366_08355 PF08240 Alcohol dehydrogenase GroES-like domain HB366_08355 PF00107 Zinc-binding dehydrogenase HB366_08360 PF00171 Aldehyde dehydrogenase family HB366_08370 PF00561 alpha/beta hydrolase fold HB366_08375 PF06628 Catalase-related immune-responsive HB366_08375 PF00199 Catalase HB366_08390 PF07859 alpha/beta hydrolase fold HB366_08395 PF01047 MarR family HB366_08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_08400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB366_08405 PF00106 short chain dehydrogenase HB366_08410 PF01872 RibD C-terminal domain HB366_08415 PF00376 MerR family regulatory protein HB366_08415 PF09278 MerR, DNA binding HB366_08425 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_08435 PF12706 Beta-lactamase superfamily domain HB366_08440 PF08359 YsiA-like protein, C-terminal region HB366_08440 PF00440 Bacterial regulatory proteins, tetR family HB366_08450 PF00857 Isochorismatase family HB366_08455 PF03466 LysR substrate binding domain HB366_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_08460 PF07995 Glucose / Sorbosone dehydrogenase HB366_08465 PF02254 TrkA-N domain HB366_08465 PF00999 Sodium/hydrogen exchanger family HB366_08475 PF01546 Peptidase family M20/M25/M40 HB366_08475 PF07687 Peptidase dimerisation domain HB366_08485 PF08479 POTRA domain, ShlB-type HB366_08485 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HB366_08485 PF17287 POTRA domain HB366_08490 PF05860 haemagglutination activity domain HB366_08490 PF13332 Hemagglutinin repeat HB366_08490 PF13018 Extended Signal Peptide of Type V secretion system HB366_08490 PF04829 Pre-toxin domain with VENN motif HB366_08505 PF07690 Major Facilitator Superfamily HB366_08510 PF04909 Amidohydrolase HB366_08520 PF00392 Bacterial regulatory proteins, gntR family HB366_08520 PF07702 UTRA domain HB366_08525 PF08450 SMP-30/Gluconolactonase/LRE-like region HB366_08535 PF03466 LysR substrate binding domain HB366_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_08555 PF07690 Major Facilitator Superfamily HB366_08560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB366_08560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB366_08560 PF01842 ACT domain HB366_08565 PF03737 Aldolase/RraA HB366_08585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_08585 PF00529 HlyD membrane-fusion protein of T1SS HB366_08600 PF00171 Aldehyde dehydrogenase family HB366_08605 PF00920 Dehydratase family HB366_08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_08615 PF03466 LysR substrate binding domain HB366_08620 PF01370 NAD dependent epimerase/dehydratase family HB366_08625 PF07690 Major Facilitator Superfamily HB366_08630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HB366_08630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HB366_08635 PF06719 AraC-type transcriptional regulator N-terminus HB366_08635 PF12833 Helix-turn-helix domain HB366_08650 PF00107 Zinc-binding dehydrogenase HB366_08650 PF08240 Alcohol dehydrogenase GroES-like domain HB366_08665 PF00005 ABC transporter HB366_08685 PF14572 Phosphoribosyl synthetase-associated domain HB366_08685 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HB366_08690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HB366_08760 PF00196 Bacterial regulatory proteins, luxR family HB366_08765 PF01425 Amidase HB366_08770 PF13533 Biotin-lipoyl like HB366_08775 PF07690 Major Facilitator Superfamily HB366_08800 PF01975 Survival protein SurE HB366_08810 PF04607 Region found in RelA / SpoT proteins HB366_08810 PF13291 ACT domain HB366_08810 PF02824 TGS domain HB366_08860 PF12146 Serine aminopeptidase, S33 HB366_08865 PF02311 AraC-like ligand binding domain HB366_08865 PF12833 Helix-turn-helix domain HB366_08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_08875 PF16527 Two-component sensor protein CpxA, periplasmic domain HB366_08875 PF00512 His Kinase A (phospho-acceptor) domain HB366_08875 PF00672 HAMP domain HB366_08880 PF00072 Response regulator receiver domain HB366_08880 PF00486 Transcriptional regulatory protein, C terminal HB366_08885 PF00529 HlyD membrane-fusion protein of T1SS HB366_08885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_08890 PF00873 AcrB/AcrD/AcrF family HB366_08895 PF02321 Outer membrane efflux protein HB366_08900 PF12146 Serine aminopeptidase, S33 HB366_08905 PF00743 Flavin-binding monooxygenase-like HB366_08910 PF01593 Flavin containing amine oxidoreductase HB366_08925 PF01266 FAD dependent oxidoreductase HB366_08945 PF16970 Type-1 fimbrial protein, A HB366_08955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HB366_08955 PF02753 Pili assembly chaperone PapD, C-terminal domain HB366_08960 PF00577 Outer membrane usher protein HB366_08960 PF13954 PapC N-terminal domain HB366_08960 PF13953 PapC C-terminal domain HB366_08965 PF00419 Fimbrial protein HB366_08975 PF08240 Alcohol dehydrogenase GroES-like domain HB366_08975 PF00107 Zinc-binding dehydrogenase HB366_08985 PF00199 Catalase HB366_09000 PF13091 PLD-like domain HB366_09020 PF01244 Membrane dipeptidase (Peptidase family M19) HB366_09025 PF04055 Radical SAM superfamily HB366_09025 PF13186 Iron-sulfur cluster-binding domain HB366_09030 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HB366_09035 PF03070 TENA/THI-4/PQQC family HB366_09040 PF12706 Beta-lactamase superfamily domain HB366_09045 PF08042 PqqA family HB366_09050 PF13090 Polyphosphate kinase C-terminal domain 2 HB366_09050 PF13089 Polyphosphate kinase N-terminal domain HB366_09050 PF17941 Polyphosphate kinase C-terminal domain 1 HB366_09050 PF02503 Polyphosphate kinase middle domain HB366_09055 PF00149 Calcineurin-like phosphoesterase HB366_09065 PF00550 Phosphopantetheine attachment site HB366_09065 PF00857 Isochorismatase family HB366_09070 PF00106 short chain dehydrogenase HB366_09075 PF03459 TOBE domain HB366_09075 PF00005 ABC transporter HB366_09080 PF00528 Binding-protein-dependent transport system inner membrane component HB366_09090 PF03459 TOBE domain HB366_09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_09095 PF00355 Rieske [2Fe-2S] domain HB366_09095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB366_09100 PF00866 Ring hydroxylating beta subunit HB366_09105 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_09105 PF00970 Oxidoreductase FAD-binding domain HB366_09105 PF00175 Oxidoreductase NAD-binding domain HB366_09110 PF14525 AraC-binding-like domain HB366_09110 PF12833 Helix-turn-helix domain HB366_09120 PF01613 Flavin reductase like domain HB366_09135 PF01738 Dienelactone hydrolase family HB366_09145 PF06719 AraC-type transcriptional regulator N-terminus HB366_09145 PF12833 Helix-turn-helix domain HB366_09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_09170 PF03466 LysR substrate binding domain HB366_09175 PF01144 Coenzyme A transferase HB366_09180 PF01144 Coenzyme A transferase HB366_09185 PF02667 Short chain fatty acid transporter HB366_09190 PF00108 Thiolase, N-terminal domain HB366_09190 PF02803 Thiolase, C-terminal domain HB366_09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_09195 PF03466 LysR substrate binding domain HB366_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_09200 PF03466 LysR substrate binding domain HB366_09215 PF10415 Fumarase C C-terminus HB366_09215 PF00206 Lyase HB366_09220 PF07715 TonB-dependent Receptor Plug Domain HB366_09220 PF00593 TonB dependent receptor HB366_09225 PF00083 Sugar (and other) transporter HB366_09240 PF00005 ABC transporter HB366_09245 PF00528 Binding-protein-dependent transport system inner membrane component HB366_09250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HB366_09265 PF07702 UTRA domain HB366_09265 PF00392 Bacterial regulatory proteins, gntR family HB366_09275 PF02525 Flavodoxin-like fold HB366_09280 PF01638 HxlR-like helix-turn-helix HB366_09285 PF06445 GyrI-like small molecule binding domain HB366_09285 PF12833 Helix-turn-helix domain HB366_09300 PF01925 Sulfite exporter TauE/SafE HB366_09305 PF04273 Putative phosphatase (DUF442) HB366_09305 PF00753 Metallo-beta-lactamase superfamily HB366_09310 PF04273 Putative phosphatase (DUF442) HB366_09310 PF00753 Metallo-beta-lactamase superfamily HB366_09315 PF02954 Bacterial regulatory protein, Fis family HB366_09315 PF00072 Response regulator receiver domain HB366_09315 PF00158 Sigma-54 interaction domain HB366_09320 PF01062 Bestrophin, RFP-TM, chloride channel HB366_09325 PF00107 Zinc-binding dehydrogenase HB366_09325 PF08240 Alcohol dehydrogenase GroES-like domain HB366_09330 PF00106 short chain dehydrogenase HB366_09335 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_09335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB366_09340 PF02817 e3 binding domain HB366_09340 PF00364 Biotin-requiring enzyme HB366_09340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HB366_09345 PF02779 Transketolase, pyrimidine binding domain HB366_09345 PF02780 Transketolase, C-terminal domain HB366_09350 PF00676 Dehydrogenase E1 component HB366_09355 PF04055 Radical SAM superfamily HB366_09370 PF00990 Diguanylate cyclase, GGDEF domain HB366_09370 PF08448 PAS fold HB366_09375 PF01264 Chorismate synthase HB366_09380 PF05175 Methyltransferase small domain HB366_09385 PF00291 Pyridoxal-phosphate dependent enzyme HB366_09395 PF01434 Peptidase family M41 HB366_09395 PF17862 AAA+ lid domain HB366_09395 PF00004 ATPase family associated with various cellular activities (AAA) HB366_09405 PF05166 YcgL domain HB366_09430 PF13662 Toprim domain HB366_09430 PF02132 RecR protein HB366_09435 PF02575 YbaB/EbfC DNA-binding family HB366_09445 PF01053 Cys/Met metabolism PLP-dependent enzyme HB366_09450 PF00561 alpha/beta hydrolase fold HB366_09455 PF08241 Methyltransferase domain HB366_09485 PF01230 HIT domain HB366_09520 PF00005 ABC transporter HB366_09525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_09535 PF02684 Lipid-A-disaccharide synthetase HB366_09540 PF00593 TonB dependent receptor HB366_09540 PF07715 TonB-dependent Receptor Plug Domain HB366_09560 PF01925 Sulfite exporter TauE/SafE HB366_09565 PF00793 DAHP synthetase I family HB366_09570 PF02654 Cobalamin-5-phosphate synthase HB366_09585 PF02277 Phosphoribosyltransferase HB366_09590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HB366_09625 PF00593 TonB dependent receptor HB366_09625 PF07715 TonB-dependent Receptor Plug Domain HB366_09640 PF04183 IucA / IucC family HB366_09640 PF06276 Ferric iron reductase FhuF-like transporter HB366_09645 PF06276 Ferric iron reductase FhuF-like transporter HB366_09645 PF04183 IucA / IucC family HB366_09650 PF07690 Major Facilitator Superfamily HB366_09655 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HB366_09660 PF04183 IucA / IucC family HB366_09660 PF06276 Ferric iron reductase FhuF-like transporter HB366_09665 PF04073 Aminoacyl-tRNA editing domain HB366_09675 PF03109 ABC1 family HB366_09680 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_09680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_09680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_09685 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_09685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_09685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_09690 PF00487 Fatty acid desaturase HB366_09695 PF12852 Cupin HB366_09695 PF12833 Helix-turn-helix domain HB366_09700 PF09312 SurA N-terminal domain HB366_09700 PF00639 PPIC-type PPIASE domain HB366_09705 PF00216 Bacterial DNA-binding protein HB366_09720 PF02082 Transcriptional regulator HB366_09725 PF00266 Aminotransferase class-V HB366_09730 PF01592 NifU-like N terminal domain HB366_09735 PF01521 Iron-sulphur cluster biosynthesis HB366_09740 PF00226 DnaJ domain HB366_09740 PF07743 HSCB C-terminal oligomerisation domain HB366_09745 PF00012 Hsp70 protein HB366_09750 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_09755 PF00211 Adenylate and Guanylate cyclase catalytic domain HB366_09765 PF17757 UvrB interaction domain HB366_09765 PF00270 DEAD/DEAH box helicase HB366_09765 PF03461 TRCF domain HB366_09765 PF00271 Helicase conserved C-terminal domain HB366_09765 PF02559 CarD-like/TRCF domain HB366_09785 PF03737 Aldolase/RraA HB366_09790 PF13460 NAD(P)H-binding HB366_09795 PF01649 Ribosomal protein S20 HB366_09805 PF00459 Inositol monophosphatase family HB366_09820 PF00005 ABC transporter HB366_09820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HB366_09825 PF00528 Binding-protein-dependent transport system inner membrane component HB366_09830 PF00528 Binding-protein-dependent transport system inner membrane component HB366_09835 PF01432 Peptidase family M3 HB366_09855 PF07715 TonB-dependent Receptor Plug Domain HB366_09855 PF00593 TonB dependent receptor HB366_09865 PF01618 MotA/TolQ/ExbB proton channel family HB366_09870 PF02472 Biopolymer transport protein ExbD/TolR HB366_09875 PF02472 Biopolymer transport protein ExbD/TolR HB366_09885 PF01274 Malate synthase HB366_09890 PF03969 AFG1-like ATPase HB366_09900 PF00743 Flavin-binding monooxygenase-like HB366_09910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HB366_09920 PF00216 Bacterial DNA-binding protein HB366_09925 PF00575 S1 RNA binding domain HB366_09930 PF02224 Cytidylate kinase HB366_09940 PF14437 MafB19-like deaminase HB366_09950 PF03167 Uracil DNA glycosylase superfamily HB366_09960 PF03934 Type II secretion system (T2SS), protein K HB366_09965 PF07963 Prokaryotic N-terminal methylation motif HB366_09965 PF11612 Type II secretion system (T2SS), protein J HB366_09970 PF07963 Prokaryotic N-terminal methylation motif HB366_09970 PF02501 Type II secretion system (T2SS), protein I HB366_09985 PF01026 TatD related DNase HB366_09995 PF09115 DNA polymerase III, delta subunit, C terminal HB366_10000 PF02348 Cytidylyltransferase HB366_10005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HB366_10010 PF00664 ABC transporter transmembrane region HB366_10010 PF00005 ABC transporter HB366_10020 PF01618 MotA/TolQ/ExbB proton channel family HB366_10025 PF17762 HTH domain found in ParB protein HB366_10025 PF02195 ParB-like nuclease domain HB366_10030 PF13614 AAA domain HB366_10035 PF02527 rRNA small subunit methyltransferase G HB366_10040 PF00483 Nucleotidyl transferase HB366_10045 PF01636 Phosphotransferase enzyme family HB366_10050 PF04453 LPS transport system D HB366_10050 PF03968 OstA-like protein HB366_10055 PF00639 PPIC-type PPIASE domain HB366_10055 PF09312 SurA N-terminal domain HB366_10060 PF01116 Fructose-bisphosphate aldolase class-II HB366_10070 PF00162 Phosphoglycerate kinase HB366_10080 PF02545 Maf-like protein HB366_10085 PF08007 Cupin superfamily protein HB366_10105 PF00375 Sodium:dicarboxylate symporter family HB366_10110 PF06912 Protein of unknown function (DUF1275) HB366_10115 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HB366_10120 PF00005 ABC transporter HB366_10120 PF00664 ABC transporter transmembrane region HB366_10130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HB366_10130 PF12833 Helix-turn-helix domain HB366_10135 PF01597 Glycine cleavage H-protein HB366_10140 PF02146 Sir2 family HB366_10145 PF00474 Sodium:solute symporter family HB366_10150 PF01037 Lrp/AsnC ligand binding domain HB366_10155 PF01619 Proline dehydrogenase HB366_10155 PF00171 Aldehyde dehydrogenase family HB366_10155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HB366_10155 PF14850 DNA-binding domain of Proline dehydrogenase HB366_10160 PF04229 GrpB protein HB366_10165 PF05958 tRNA (Uracil-5-)-methyltransferase HB366_10175 PF09992 Phosphodiester glycosidase HB366_10185 PF04264 YceI-like domain HB366_10195 PF02780 Transketolase, C-terminal domain HB366_10195 PF02779 Transketolase, pyrimidine binding domain HB366_10195 PF00456 Transketolase, thiamine diphosphate binding domain HB366_10200 PF00438 S-adenosylmethionine synthetase, N-terminal domain HB366_10200 PF02773 S-adenosylmethionine synthetase, C-terminal domain HB366_10200 PF02772 S-adenosylmethionine synthetase, central domain HB366_10220 PF00905 Penicillin binding protein transpeptidase domain HB366_10235 PF02075 Crossover junction endodeoxyribonuclease RuvC HB366_10240 PF01256 Carbohydrate kinase HB366_10240 PF03853 YjeF-related protein N-terminus HB366_10245 PF08331 Domain of unknown function (DUF1730) HB366_10250 PF06968 Biotin and Thiamin Synthesis associated domain HB366_10250 PF04055 Radical SAM superfamily HB366_10265 PF16970 Type-1 fimbrial protein, A HB366_10270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HB366_10270 PF02753 Pili assembly chaperone PapD, C-terminal domain HB366_10275 PF13953 PapC C-terminal domain HB366_10275 PF13954 PapC N-terminal domain HB366_10275 PF00577 Outer membrane usher protein HB366_10295 PF00892 EamA-like transporter family HB366_10305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HB366_10315 PF03466 LysR substrate binding domain HB366_10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10335 PF00440 Bacterial regulatory proteins, tetR family HB366_10345 PF01709 Transcriptional regulator HB366_10350 PF01037 Lrp/AsnC ligand binding domain HB366_10360 PF00005 ABC transporter HB366_10365 PF00528 Binding-protein-dependent transport system inner membrane component HB366_10370 PF00528 Binding-protein-dependent transport system inner membrane component HB366_10385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_10385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB366_10395 PF00296 Luciferase-like monooxygenase HB366_10400 PF03180 NLPA lipoprotein HB366_10405 PF03180 NLPA lipoprotein HB366_10410 PF00005 ABC transporter HB366_10410 PF09383 NIL domain HB366_10415 PF00528 Binding-protein-dependent transport system inner membrane component HB366_10420 PF06071 Protein of unknown function (DUF933) HB366_10420 PF01926 50S ribosome-binding GTPase HB366_10445 PF03591 AzlC protein HB366_10450 PF05437 Branched-chain amino acid transport protein (AzlD) HB366_10460 PF02222 ATP-grasp domain HB366_10465 PF08335 GlnD PII-uridylyltransferase HB366_10465 PF01966 HD domain HB366_10465 PF01909 Nucleotidyltransferase domain HB366_10470 PF00155 Aminotransferase class I and II HB366_10480 PF12833 Helix-turn-helix domain HB366_10480 PF12852 Cupin HB366_10485 PF00255 Glutathione peroxidase HB366_10490 PF01641 SelR domain HB366_10495 PF00155 Aminotransferase class I and II HB366_10500 PF00375 Sodium:dicarboxylate symporter family HB366_10505 PF17763 Glutaminase/Asparaginase C-terminal domain HB366_10505 PF00710 Asparaginase, N-terminal HB366_10510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HB366_10510 PF07733 Bacterial DNA polymerase III alpha NTPase domain HB366_10510 PF01336 OB-fold nucleic acid binding domain HB366_10510 PF02811 PHP domain HB366_10510 PF14579 Helix-hairpin-helix motif HB366_10515 PF00588 SpoU rRNA Methylase family HB366_10520 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_10535 PF13192 Thioredoxin domain HB366_10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10550 PF03466 LysR substrate binding domain HB366_10555 PF01758 Sodium Bile acid symporter family HB366_10560 PF01022 Bacterial regulatory protein, arsR family HB366_10565 PF03960 ArsC family HB366_10575 PF13382 Adenine deaminase C-terminal domain HB366_10575 PF01979 Amidohydrolase family HB366_10585 PF03466 LysR substrate binding domain HB366_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10595 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HB366_10600 PF01177 Asp/Glu/Hydantoin racemase HB366_10605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HB366_10610 PF00528 Binding-protein-dependent transport system inner membrane component HB366_10615 PF00005 ABC transporter HB366_10620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HB366_10630 PF00083 Sugar (and other) transporter HB366_10635 PF00296 Luciferase-like monooxygenase HB366_10640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB366_10640 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_10640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_10650 PF01654 Cytochrome bd terminal oxidase subunit I HB366_10655 PF02322 Cytochrome bd terminal oxidase subunit II HB366_10665 PF00392 Bacterial regulatory proteins, gntR family HB366_10665 PF00155 Aminotransferase class I and II HB366_10670 PF03466 LysR substrate binding domain HB366_10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10685 PF00698 Acyl transferase domain HB366_10690 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HB366_10700 PF01039 Carboxyl transferase domain HB366_10705 PF06857 Malonate decarboxylase delta subunit (MdcD) HB366_10710 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HB366_10715 PF16957 Malonate decarboxylase, alpha subunit, transporter HB366_10720 PF07690 Major Facilitator Superfamily HB366_10735 PF00392 Bacterial regulatory proteins, gntR family HB366_10735 PF00155 Aminotransferase class I and II HB366_10740 PF04172 LrgB-like family HB366_10745 PF03788 LrgA family HB366_10750 PF03466 LysR substrate binding domain HB366_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10755 PF14834 Glutathione S-transferase, C-terminal domain HB366_10755 PF02798 Glutathione S-transferase, N-terminal domain HB366_10760 PF02798 Glutathione S-transferase, N-terminal domain HB366_10765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10765 PF03466 LysR substrate binding domain HB366_10775 PF00581 Rhodanese-like domain HB366_10780 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_10790 PF00266 Aminotransferase class-V HB366_10800 PF01810 LysE type translocator HB366_10805 PF03466 LysR substrate binding domain HB366_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10815 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB366_10820 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB366_10825 PF00005 ABC transporter HB366_10830 PF00528 Binding-protein-dependent transport system inner membrane component HB366_10835 PF00528 Binding-protein-dependent transport system inner membrane component HB366_10850 PF00072 Response regulator receiver domain HB366_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_10855 PF00072 Response regulator receiver domain HB366_10855 PF09308 LuxQ, periplasmic HB366_10855 PF00512 His Kinase A (phospho-acceptor) domain HB366_10865 PF01037 Lrp/AsnC ligand binding domain HB366_10865 PF13404 AsnC-type helix-turn-helix domain HB366_10875 PF00717 Peptidase S24-like HB366_10900 PF06628 Catalase-related immune-responsive HB366_10900 PF00199 Catalase HB366_10900 PF18011 C-terminal domain found in long catalases HB366_10910 PF00994 Probable molybdopterin binding domain HB366_10910 PF02464 Competence-damaged protein HB366_10910 PF18146 Damage-inducible protein CinA KH domain HB366_10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_10945 PF03466 LysR substrate binding domain HB366_10965 PF13193 AMP-binding enzyme C-terminal domain HB366_10965 PF00501 AMP-binding enzyme HB366_10970 PF00440 Bacterial regulatory proteins, tetR family HB366_10975 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_10975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_10975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_10980 PF01039 Carboxyl transferase domain HB366_10985 PF00378 Enoyl-CoA hydratase/isomerase HB366_10990 PF02785 Biotin carboxylase C-terminal domain HB366_10990 PF18140 Propionyl-coenzyme A carboxylase BT domain HB366_10990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB366_10990 PF00364 Biotin-requiring enzyme HB366_10990 PF00289 Biotin carboxylase, N-terminal domain HB366_10995 PF00682 HMGL-like HB366_11000 PF03466 LysR substrate binding domain HB366_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_11015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_11015 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_11015 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB366_11015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_11025 PF07690 Major Facilitator Superfamily HB366_11035 PF01144 Coenzyme A transferase HB366_11040 PF01144 Coenzyme A transferase HB366_11045 PF07690 Major Facilitator Superfamily HB366_11050 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_11050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_11050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_11055 PF00378 Enoyl-CoA hydratase/isomerase HB366_11065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB366_11065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB366_11065 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HB366_11070 PF00108 Thiolase, N-terminal domain HB366_11070 PF02803 Thiolase, C-terminal domain HB366_11075 PF09339 IclR helix-turn-helix domain HB366_11080 PF07690 Major Facilitator Superfamily HB366_11085 PF03060 Nitronate monooxygenase HB366_11090 PF00378 Enoyl-CoA hydratase/isomerase HB366_11095 PF09339 IclR helix-turn-helix domain HB366_11100 PF02515 CoA-transferase family III HB366_11105 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_11105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_11105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_11110 PF07690 Major Facilitator Superfamily HB366_11115 PF13419 Haloacid dehalogenase-like hydrolase HB366_11120 PF00266 Aminotransferase class-V HB366_11125 PF01266 FAD dependent oxidoreductase HB366_11130 PF00528 Binding-protein-dependent transport system inner membrane component HB366_11135 PF00005 ABC transporter HB366_11135 PF08402 TOBE domain HB366_11145 PF07702 UTRA domain HB366_11145 PF00392 Bacterial regulatory proteins, gntR family HB366_11150 PF01494 FAD binding domain HB366_11155 PF09339 IclR helix-turn-helix domain HB366_11155 PF01614 Bacterial transcriptional regulator HB366_11160 PF02525 Flavodoxin-like fold HB366_11165 PF03466 LysR substrate binding domain HB366_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_11170 PF02627 Carboxymuconolactone decarboxylase family HB366_11175 PF00171 Aldehyde dehydrogenase family HB366_11185 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HB366_11195 PF00171 Aldehyde dehydrogenase family HB366_11200 PF00296 Luciferase-like monooxygenase HB366_11205 PF01613 Flavin reductase like domain HB366_11210 PF12697 Alpha/beta hydrolase family HB366_11230 PF01292 Prokaryotic cytochrome b561 HB366_11235 PF00199 Catalase HB366_11270 PF03061 Thioesterase superfamily HB366_11275 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_11280 PF08223 PaaX-like protein C-terminal domain HB366_11280 PF07848 PaaX-like protein HB366_11285 PF14535 AMP-binding enzyme C-terminal domain HB366_11285 PF00501 AMP-binding enzyme HB366_11290 PF02803 Thiolase, C-terminal domain HB366_11290 PF00108 Thiolase, N-terminal domain HB366_11295 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HB366_11295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB366_11295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB366_11300 PF00378 Enoyl-CoA hydratase/isomerase HB366_11305 PF00378 Enoyl-CoA hydratase/isomerase HB366_11310 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_11310 PF00970 Oxidoreductase FAD-binding domain HB366_11310 PF00175 Oxidoreductase NAD-binding domain HB366_11315 PF01883 Iron-sulfur cluster assembly protein HB366_11320 PF05138 Phenylacetic acid catabolic protein HB366_11325 PF06243 Phenylacetic acid degradation B HB366_11330 PF05138 Phenylacetic acid catabolic protein HB366_11335 PF01575 MaoC like domain HB366_11335 PF00171 Aldehyde dehydrogenase family HB366_11340 PF03315 Serine dehydratase beta chain HB366_11340 PF03313 Serine dehydratase alpha chain HB366_11345 PF13520 Amino acid permease HB366_11350 PF00171 Aldehyde dehydrogenase family HB366_11355 PF00083 Sugar (and other) transporter HB366_11365 PF04324 BFD-like [2Fe-2S] binding domain HB366_11365 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_11375 PF01266 FAD dependent oxidoreductase HB366_11380 PF05544 Proline racemase HB366_11385 PF00392 Bacterial regulatory proteins, gntR family HB366_11395 PF00701 Dihydrodipicolinate synthetase family HB366_11405 PF09278 MerR, DNA binding HB366_11405 PF00376 MerR family regulatory protein HB366_11420 PF02677 Epoxyqueuosine reductase QueH HB366_11435 PF07690 Major Facilitator Superfamily HB366_11440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HB366_11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_11450 PF03466 LysR substrate binding domain HB366_11480 PF10431 C-terminal, D2-small domain, of ClpB protein HB366_11480 PF07724 AAA domain (Cdc48 subfamily) HB366_11480 PF00004 ATPase family associated with various cellular activities (AAA) HB366_11480 PF17871 AAA lid domain HB366_11490 PF00691 OmpA family HB366_11490 PF01389 OmpA-like transmembrane domain HB366_11555 PF00005 ABC transporter HB366_11560 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB366_11565 PF01425 Amidase HB366_11570 PF01402 Ribbon-helix-helix protein, copG family HB366_11570 PF08753 NikR C terminal nickel binding domain HB366_11590 PF02525 Flavodoxin-like fold HB366_11595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB366_11595 PF02785 Biotin carboxylase C-terminal domain HB366_11595 PF00289 Biotin carboxylase, N-terminal domain HB366_11610 PF13823 Alcohol dehydrogenase GroES-associated HB366_11610 PF00107 Zinc-binding dehydrogenase HB366_11610 PF08240 Alcohol dehydrogenase GroES-like domain HB366_11620 PF00440 Bacterial regulatory proteins, tetR family HB366_11640 PF00654 Voltage gated chloride channel HB366_11645 PF02785 Biotin carboxylase C-terminal domain HB366_11645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB366_11645 PF00289 Biotin carboxylase, N-terminal domain HB366_11645 PF00364 Biotin-requiring enzyme HB366_11655 PF07286 Protein of unknown function (DUF1445) HB366_11660 PF03746 LamB/YcsF family HB366_11665 PF01566 Natural resistance-associated macrophage protein HB366_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_11670 PF03466 LysR substrate binding domain HB366_11685 PF03527 RHS protein HB366_11685 PF05593 RHS Repeat HB366_11685 PF14220 Domain of unknown function (DUF4329) HB366_11690 PF04717 Type VI secretion system, phage-baseplate injector HB366_11690 PF16671 Actin cross-linking domain HB366_11700 PF13419 Haloacid dehalogenase-like hydrolase HB366_11720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB366_11720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB366_11740 PF07690 Major Facilitator Superfamily HB366_11750 PF03279 Bacterial lipid A biosynthesis acyltransferase HB366_11755 PF03707 Bacterial signalling protein N terminal repeat HB366_11755 PF00990 Diguanylate cyclase, GGDEF domain HB366_11755 PF00563 EAL domain HB366_11760 PF00892 EamA-like transporter family HB366_11765 PF01037 Lrp/AsnC ligand binding domain HB366_11770 PF01624 MutS domain I HB366_11770 PF00488 MutS domain V HB366_11770 PF05190 MutS family domain IV HB366_11770 PF05192 MutS domain III HB366_11770 PF05188 MutS domain II HB366_11780 PF00037 4Fe-4S binding domain HB366_11780 PF11953 Domain of unknown function (DUF3470) HB366_11790 PF01596 O-methyltransferase HB366_11800 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_11805 PF01205 Uncharacterized protein family UPF0029 HB366_11815 PF03412 Peptidase C39 family HB366_11815 PF00005 ABC transporter HB366_11815 PF00664 ABC transporter transmembrane region HB366_11820 PF02321 Outer membrane efflux protein HB366_11830 PF00005 ABC transporter HB366_11830 PF12399 Branched-chain amino acid ATP-binding cassette transporter HB366_11835 PF03968 OstA-like protein HB366_11850 PF00571 CBS domain HB366_11850 PF01380 SIS domain HB366_11855 PF09190 DALR domain HB366_11855 PF01406 tRNA synthetases class I (C) catalytic domain HB366_11865 PF00589 Phage integrase family HB366_11875 PF01757 Acyltransferase family HB366_11980 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) HB366_12000 PF06381 Protein of unknown function (DUF1073) HB366_12075 PF00145 C-5 cytosine-specific DNA methylase HB366_12090 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HB366_12095 PF00717 Peptidase S24-like HB366_12095 PF01726 LexA DNA binding domain HB366_12165 PF01638 HxlR-like helix-turn-helix HB366_12170 PF07690 Major Facilitator Superfamily HB366_12195 PF14748 Pyrroline-5-carboxylate reductase dimerisation HB366_12195 PF03807 NADP oxidoreductase coenzyme F420-dependent HB366_12205 PF00313 'Cold-shock' DNA-binding domain HB366_12210 PF01810 LysE type translocator HB366_12245 PF13742 OB-fold nucleic acid binding domain HB366_12245 PF02601 Exonuclease VII, large subunit HB366_12280 PF00376 MerR family regulatory protein HB366_12280 PF09278 MerR, DNA binding HB366_12285 PF00403 Heavy-metal-associated domain HB366_12295 PF03466 LysR substrate binding domain HB366_12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_12300 PF00355 Rieske [2Fe-2S] domain HB366_12300 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB366_12305 PF00866 Ring hydroxylating beta subunit HB366_12310 PF00970 Oxidoreductase FAD-binding domain HB366_12310 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_12310 PF00175 Oxidoreductase NAD-binding domain HB366_12315 PF00106 short chain dehydrogenase HB366_12320 PF03594 Benzoate membrane transport protein HB366_12325 PF07690 Major Facilitator Superfamily HB366_12335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HB366_12335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HB366_12340 PF00270 DEAD/DEAH box helicase HB366_12340 PF00271 Helicase conserved C-terminal domain HB366_12340 PF11898 Domain of unknown function (DUF3418) HB366_12340 PF04408 Helicase associated domain (HA2) HB366_12340 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HB366_12345 PF00578 AhpC/TSA family HB366_12345 PF10417 C-terminal domain of 1-Cys peroxiredoxin HB366_12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_12365 PF13192 Thioredoxin domain HB366_12375 PF00043 Glutathione S-transferase, C-terminal domain HB366_12375 PF02798 Glutathione S-transferase, N-terminal domain HB366_12385 PF02390 Putative methyltransferase HB366_12390 PF13417 Glutathione S-transferase, N-terminal domain HB366_12390 PF00043 Glutathione S-transferase, C-terminal domain HB366_12400 PF00691 OmpA family HB366_12400 PF13488 Glycine zipper HB366_12405 PF01979 Amidohydrolase family HB366_12410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HB366_12410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HB366_12420 PF01170 Putative RNA methylase family UPF0020 HB366_12420 PF02926 THUMP domain HB366_12420 PF10672 S-adenosylmethionine-dependent methyltransferase HB366_12435 PF02861 Clp amino terminal domain, pathogenicity island component HB366_12435 PF17871 AAA lid domain HB366_12435 PF07724 AAA domain (Cdc48 subfamily) HB366_12435 PF00004 ATPase family associated with various cellular activities (AAA) HB366_12435 PF10431 C-terminal, D2-small domain, of ClpB protein HB366_12450 PF02566 OsmC-like protein HB366_12455 PF13545 Crp-like helix-turn-helix domain HB366_12455 PF00027 Cyclic nucleotide-binding domain HB366_12465 PF00248 Aldo/keto reductase family HB366_12480 PF00709 Adenylosuccinate synthetase HB366_12485 PF13393 Histidyl-tRNA synthetase HB366_12490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HB366_12490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HB366_12495 PF02272 DHHA1 domain HB366_12495 PF01411 tRNA synthetases class II (A) HB366_12495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HB366_12500 PF01842 ACT domain HB366_12500 PF00696 Amino acid kinase family HB366_12500 PF13840 ACT domain HB366_12505 PF02599 Global regulator protein family HB366_12510 PF01351 Ribonuclease HII HB366_12520 PF01292 Prokaryotic cytochrome b561 HB366_12525 PF00962 Adenosine/AMP deaminase HB366_12530 PF00860 Permease family HB366_12540 PF00743 Flavin-binding monooxygenase-like HB366_12545 PF00106 short chain dehydrogenase HB366_12555 PF17954 Quercetinase C-terminal cupin domain HB366_12555 PF02678 Pirin HB366_12560 PF00440 Bacterial regulatory proteins, tetR family HB366_12560 PF17932 Tetracyclin repressor-like, C-terminal domain HB366_12565 PF13610 DDE domain HB366_12580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB366_12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_12585 PF00764 Arginosuccinate synthase HB366_12590 PF01590 GAF domain HB366_12590 PF00990 Diguanylate cyclase, GGDEF domain HB366_12590 PF00360 Phytochrome region HB366_12590 PF00563 EAL domain HB366_12595 PF01979 Amidohydrolase family HB366_12600 PF00929 Exonuclease HB366_12610 PF07715 TonB-dependent Receptor Plug Domain HB366_12610 PF00593 TonB dependent receptor HB366_12615 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_12615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB366_12620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HB366_12620 PF00005 ABC transporter HB366_12625 PF12911 N-terminal TM domain of oligopeptide transport permease C HB366_12625 PF00528 Binding-protein-dependent transport system inner membrane component HB366_12630 PF00528 Binding-protein-dependent transport system inner membrane component HB366_12635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HB366_12640 PF01476 LysM domain HB366_12640 PF01464 Transglycosylase SLT domain HB366_12640 PF01464 Transglycosylase SLT domain HB366_12640 PF01476 LysM domain HB366_12645 PF00929 Exonuclease HB366_12655 PF09297 NADH pyrophosphatase zinc ribbon domain HB366_12655 PF00293 NUDIX domain HB366_12665 PF04972 BON domain HB366_12670 PF02021 Uncharacterised protein family UPF0102 HB366_12675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HB366_12685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_12685 PF03466 LysR substrate binding domain HB366_12690 PF01810 LysE type translocator HB366_12700 PF13411 MerR HTH family regulatory protein HB366_12710 PF01494 FAD binding domain HB366_12715 PF01494 FAD binding domain HB366_12720 PF05195 Aminopeptidase P, N-terminal domain HB366_12720 PF00557 Metallopeptidase family M24 HB366_12755 PF00884 Sulfatase HB366_12755 PF08019 Phosphoethanolamine transferase EptA/EptB HB366_12800 PF01551 Peptidase family M23 HB366_12800 PF01476 LysM domain HB366_12800 PF08525 Opacity-associated protein A N-terminal motif HB366_13125 PF01812 5-formyltetrahydrofolate cyclo-ligase family HB366_13135 PF13018 Extended Signal Peptide of Type V secretion system HB366_13135 PF05662 Coiled stalk of trimeric autotransporter adhesin HB366_13135 PF03895 YadA-like membrane anchor domain HB366_13135 PF05658 Head domain of trimeric autotransporter adhesin HB366_13140 PF00004 ATPase family associated with various cellular activities (AAA) HB366_13140 PF02190 ATP-dependent protease La (LON) substrate-binding domain HB366_13140 PF05362 Lon protease (S16) C-terminal proteolytic domain HB366_13145 PF02590 Predicted SPOUT methyltransferase HB366_13150 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HB366_13160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HB366_13160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HB366_13165 PF04060 Putative Fe-S cluster HB366_13170 PF10576 Iron-sulfur binding domain of endonuclease III HB366_13170 PF00633 Helix-hairpin-helix motif HB366_13170 PF00730 HhH-GPD superfamily base excision DNA repair protein HB366_13180 PF05191 Adenylate kinase, active site lid HB366_13195 PF00905 Penicillin binding protein transpeptidase domain HB366_13195 PF03717 Penicillin-binding Protein dimerisation domain HB366_13210 PF02492 CobW/HypB/UreG, nucleotide-binding domain HB366_13215 PF01730 UreF HB366_13220 PF05194 UreE urease accessory protein, C-terminal domain HB366_13220 PF02814 UreE urease accessory protein, N-terminal domain HB366_13225 PF01979 Amidohydrolase family HB366_13225 PF00449 Urease alpha-subunit, N-terminal domain HB366_13230 PF00699 Urease beta subunit HB366_13235 PF00547 Urease, gamma subunit HB366_13240 PF01774 UreD urease accessory protein HB366_13255 PF00463 Isocitrate lyase family HB366_13260 PF03466 LysR substrate binding domain HB366_13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_13265 PF03471 Transporter associated domain HB366_13265 PF00571 CBS domain HB366_13265 PF01595 Cyclin M transmembrane N-terminal domain HB366_13270 PF03600 Citrate transporter HB366_13285 PF00009 Elongation factor Tu GTP binding domain HB366_13290 PF01507 Phosphoadenosine phosphosulfate reductase family HB366_13305 PF14052 Capsule assembly protein Wzi HB366_13310 PF00152 tRNA synthetases class II (D, K and N) HB366_13310 PF01336 OB-fold nucleic acid binding domain HB366_13325 PF00301 Rubredoxin HB366_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_13330 PF18113 Rubredoxin binding C-terminal domain HB366_13335 PF00561 alpha/beta hydrolase fold HB366_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_13340 PF03466 LysR substrate binding domain HB366_13350 PF13090 Polyphosphate kinase C-terminal domain 2 HB366_13350 PF02503 Polyphosphate kinase middle domain HB366_13350 PF17941 Polyphosphate kinase C-terminal domain 1 HB366_13350 PF13089 Polyphosphate kinase N-terminal domain HB366_13355 PF00912 Transglycosylase HB366_13360 PF01694 Rhomboid family HB366_13370 PF00005 ABC transporter HB366_13375 PF13472 GDSL-like Lipase/Acylhydrolase family HB366_13380 PF00484 Carbonic anhydrase HB366_13385 PF00561 alpha/beta hydrolase fold HB366_13395 PF00593 TonB dependent receptor HB366_13395 PF07715 TonB-dependent Receptor Plug Domain HB366_13400 PF01106 NifU-like domain HB366_13400 PF01521 Iron-sulphur cluster biosynthesis HB366_13410 PF00884 Sulfatase HB366_13415 PF03781 Sulfatase-modifying factor enzyme 1 HB366_13430 PF00291 Pyridoxal-phosphate dependent enzyme HB366_13435 PF01384 Phosphate transporter family HB366_13440 PF02310 B12 binding domain HB366_13440 PF02965 Vitamin B12 dependent methionine synthase, activation domain HB366_13440 PF00809 Pterin binding enzyme HB366_13440 PF02574 Homocysteine S-methyltransferase HB366_13440 PF02607 B12 binding domain HB366_13445 PF02780 Transketolase, C-terminal domain HB366_13445 PF02779 Transketolase, pyrimidine binding domain HB366_13450 PF00456 Transketolase, thiamine diphosphate binding domain HB366_13455 PF07690 Major Facilitator Superfamily HB366_13465 PF03466 LysR substrate binding domain HB366_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_13475 PF01263 Aldose 1-epimerase HB366_13480 PF07690 Major Facilitator Superfamily HB366_13485 PF12833 Helix-turn-helix domain HB366_13485 PF02311 AraC-like ligand binding domain HB366_13490 PF04960 Glutaminase HB366_13495 PF01327 Polypeptide deformylase HB366_13500 PF07690 Major Facilitator Superfamily HB366_13510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HB366_13510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HB366_13510 PF00205 Thiamine pyrophosphate enzyme, central domain HB366_13515 PF00171 Aldehyde dehydrogenase family HB366_13520 PF03447 Homoserine dehydrogenase, NAD binding domain HB366_13520 PF01958 Domain of unknown function DUF108 HB366_13530 PF12697 Alpha/beta hydrolase family HB366_13540 PF07690 Major Facilitator Superfamily HB366_13545 PF14759 Reductase C-terminal HB366_13545 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_13550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB366_13560 PF00355 Rieske [2Fe-2S] domain HB366_13570 PF00355 Rieske [2Fe-2S] domain HB366_13575 PF09339 IclR helix-turn-helix domain HB366_13575 PF01614 Bacterial transcriptional regulator HB366_13590 PF00378 Enoyl-CoA hydratase/isomerase HB366_13600 PF00535 Glycosyl transferase family 2 HB366_13605 PF14883 Hypothetical glycosyl hydrolase family 13 HB366_13605 PF01522 Polysaccharide deacetylase HB366_13610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB366_13615 PF07152 YaeQ protein HB366_13620 PF00375 Sodium:dicarboxylate symporter family HB366_13625 PF07683 Cobalamin synthesis protein cobW C-terminal domain HB366_13625 PF02492 CobW/HypB/UreG, nucleotide-binding domain HB366_13635 PF03061 Thioesterase superfamily HB366_13645 PF02028 BCCT, betaine/carnitine/choline family transporter HB366_13650 PF02028 BCCT, betaine/carnitine/choline family transporter HB366_13655 PF00440 Bacterial regulatory proteins, tetR family HB366_13655 PF13977 BetI-type transcriptional repressor, C-terminal HB366_13660 PF00171 Aldehyde dehydrogenase family HB366_13665 PF00732 GMC oxidoreductase HB366_13665 PF05199 GMC oxidoreductase HB366_13670 PF06039 Malate:quinone oxidoreductase (Mqo) HB366_13680 PF02574 Homocysteine S-methyltransferase HB366_13685 PF13520 Amino acid permease HB366_13710 PF01126 Heme oxygenase HB366_13730 PF00593 TonB dependent receptor HB366_13730 PF07715 TonB-dependent Receptor Plug Domain HB366_13740 PF08281 Sigma-70, region 4 HB366_13740 PF04542 Sigma-70 region 2 HB366_13750 PF00701 Dihydrodipicolinate synthetase family HB366_13755 PF00083 Sugar (and other) transporter HB366_13775 PF01026 TatD related DNase HB366_13790 PF07693 KAP family P-loop domain HB366_13810 PF00436 Single-strand binding protein family HB366_13865 PF00589 Phage integrase family HB366_13865 PF13356 Arm DNA-binding domain HB366_13960 PF00712 DNA polymerase III beta subunit, N-terminal domain HB366_13960 PF02767 DNA polymerase III beta subunit, central domain HB366_13960 PF02768 DNA polymerase III beta subunit, C-terminal domain HB366_14000 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HB366_14235 PF00929 Exonuclease HB366_14310 PF07690 Major Facilitator Superfamily HB366_14315 PF13533 Biotin-lipoyl like HB366_14320 PF03061 Thioesterase superfamily HB366_14325 PF00490 Delta-aminolevulinic acid dehydratase HB366_14330 PF01266 FAD dependent oxidoreductase HB366_14335 PF01370 NAD dependent epimerase/dehydratase family HB366_14335 PF08338 Domain of unknown function (DUF1731) HB366_14355 PF00149 Calcineurin-like phosphoesterase HB366_14355 PF12320 Type 5 capsule protein repressor C-terminal domain HB366_14365 PF01168 Alanine racemase, N-terminal domain HB366_14370 PF00437 Type II/IV secretion system protein HB366_14375 PF00437 Type II/IV secretion system protein HB366_14380 PF01475 Ferric uptake regulator family HB366_14385 PF04355 SmpA / OmlA family HB366_14390 PF03658 RnfH family Ubiquitin HB366_14400 PF01814 Hemerythrin HHE cation binding domain HB366_14405 PF13230 Glutamine amidotransferases class-II HB366_14415 PF00696 Amino acid kinase family HB366_14420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB366_14420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB366_14420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB366_14420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB366_14425 PF00692 dUTPase HB366_14430 PF13361 UvrD-like helicase C-terminal domain HB366_14430 PF00580 UvrD/REP helicase N-terminal domain HB366_14435 PF00691 OmpA family HB366_14435 PF13488 Glycine zipper HB366_14440 PF01553 Acyltransferase HB366_14450 PF03775 Septum formation inhibitor MinC, C-terminal domain HB366_14455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HB366_14460 PF03776 Septum formation topological specificity factor MinE HB366_14480 PF01810 LysE type translocator HB366_14485 PF01580 FtsK/SpoIIIE family HB366_14485 PF09397 Ftsk gamma domain HB366_14485 PF17854 FtsK alpha domain HB366_14485 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HB366_14490 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB366_14495 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HB366_14500 PF04377 Arginine-tRNA-protein transferase, C terminus HB366_14500 PF04376 Arginine-tRNA-protein transferase, N terminus HB366_14505 PF00583 Acetyltransferase (GNAT) family HB366_14520 PF03143 Elongation factor Tu C-terminal domain HB366_14520 PF00009 Elongation factor Tu GTP binding domain HB366_14520 PF03144 Elongation factor Tu domain 2 HB366_14525 PF14492 Elongation Factor G, domain II HB366_14525 PF00679 Elongation factor G C-terminus HB366_14525 PF03144 Elongation factor Tu domain 2 HB366_14525 PF03764 Elongation factor G, domain IV HB366_14525 PF00009 Elongation factor Tu GTP binding domain HB366_14530 PF00177 Ribosomal protein S7p/S5e HB366_14535 PF00164 Ribosomal protein S12/S23 HB366_14545 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_14545 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_14555 PF02678 Pirin HB366_14555 PF05726 Pirin C-terminal cupin domain HB366_14565 PF00795 Carbon-nitrogen hydrolase HB366_14565 PF02540 NAD synthase HB366_14580 PF00175 Oxidoreductase NAD-binding domain HB366_14580 PF00970 Oxidoreductase FAD-binding domain HB366_14580 PF00111 2Fe-2S iron-sulfur cluster binding domain HB366_14585 PF00171 Aldehyde dehydrogenase family HB366_14590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB366_14590 PF00355 Rieske [2Fe-2S] domain HB366_14595 PF07859 alpha/beta hydrolase fold HB366_14600 PF02028 BCCT, betaine/carnitine/choline family transporter HB366_14605 PF00180 Isocitrate/isopropylmalate dehydrogenase HB366_14610 PF03466 LysR substrate binding domain HB366_14610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_14630 PF00037 4Fe-4S binding domain HB366_14635 PF01467 Cytidylyltransferase-like HB366_14640 PF01668 SmpB protein HB366_14645 PF03358 NADPH-dependent FMN reductase HB366_14655 PF01479 S4 domain HB366_14655 PF00849 RNA pseudouridylate synthase HB366_14660 PF13525 Outer membrane lipoprotein HB366_14665 PF10410 DnaB-helicase binding domain of primase HB366_14665 PF08278 DNA primase DnaG DnaB-binding HB366_14665 PF01807 CHC2 zinc finger HB366_14665 PF08275 DNA primase catalytic core, N-terminal domain HB366_14670 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HB366_14670 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HB366_14670 PF01488 Shikimate / quinate 5-dehydrogenase HB366_14680 PF03550 Outer membrane lipoprotein LolB HB366_14685 PF08544 GHMP kinases C terminal HB366_14685 PF00288 GHMP kinases N terminal domain HB366_14710 PF14572 Phosphoribosyl synthetase-associated domain HB366_14710 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HB366_14715 PF01386 Ribosomal L25p family HB366_14720 PF01195 Peptidyl-tRNA hydrolase HB366_14725 PF02261 Aspartate decarboxylase HB366_14740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HB366_14750 PF08543 Phosphomethylpyrimidine kinase HB366_14750 PF03070 TENA/THI-4/PQQC family HB366_14750 PF02581 Thiamine monophosphate synthase HB366_14755 PF01476 LysM domain HB366_14755 PF04972 BON domain HB366_14760 PF00550 Phosphopantetheine attachment site HB366_14770 PF00698 Acyl transferase domain HB366_14775 PF01783 Ribosomal L32p protein family HB366_14780 PF02620 Large ribosomal RNA subunit accumulation protein YceD HB366_14785 PF04315 Elongation factor P hydroxylase HB366_14790 PF01300 Telomere recombination HB366_14795 PF02616 Segregation and condensation protein ScpA HB366_14800 PF04079 Segregation and condensation complex subunit ScpB HB366_14805 PF01479 S4 domain HB366_14805 PF00849 RNA pseudouridylate synthase HB366_14820 PF00155 Aminotransferase class I and II HB366_14825 PF04055 Radical SAM superfamily HB366_14825 PF06968 Biotin and Thiamin Synthesis associated domain HB366_14825 PF00202 Aminotransferase class-III HB366_14830 PF12697 Alpha/beta hydrolase family HB366_14830 PF08241 Methyltransferase domain HB366_14835 PF02358 Trehalose-phosphatase HB366_14840 PF00982 Glycosyltransferase family 20 HB366_14845 PF07690 Major Facilitator Superfamily HB366_14850 PF00210 Ferritin-like domain HB366_14855 PF03120 NAD-dependent DNA ligase OB-fold domain HB366_14855 PF12826 Helix-hairpin-helix motif HB366_14855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HB366_14855 PF01653 NAD-dependent DNA ligase adenylation domain HB366_14855 PF00533 BRCA1 C Terminus (BRCT) domain HB366_14865 PF02463 RecF/RecN/SMC N terminal domain HB366_14865 PF06470 SMC proteins Flexible Hinge Domain HB366_14875 PF01925 Sulfite exporter TauE/SafE HB366_14885 PF03309 Type III pantothenate kinase HB366_14890 PF00448 SRP54-type protein, GTPase domain HB366_14890 PF02978 Signal peptide binding domain HB366_14890 PF02881 SRP54-type protein, helical bundle domain HB366_14900 PF01207 Dihydrouridine synthase (Dus) HB366_14930 PF00692 dUTPase HB366_14945 PF01048 Phosphorylase superfamily HB366_14950 PF10609 NUBPL iron-transfer P-loop NTPase HB366_14960 PF01588 Putative tRNA binding domain HB366_14960 PF09334 tRNA synthetases class I (M) HB366_14985 PF13533 Biotin-lipoyl like HB366_14990 PF00291 Pyridoxal-phosphate dependent enzyme HB366_15005 PF05552 Conserved TM helix HB366_15020 PF00970 Oxidoreductase FAD-binding domain HB366_15020 PF00175 Oxidoreductase NAD-binding domain HB366_15025 PF03466 LysR substrate binding domain HB366_15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_15030 PF00313 'Cold-shock' DNA-binding domain HB366_15040 PF00361 Proton-conducting membrane transporter HB366_15045 PF00361 Proton-conducting membrane transporter HB366_15050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HB366_15050 PF00361 Proton-conducting membrane transporter HB366_15055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HB366_15060 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HB366_15065 PF12838 4Fe-4S dicluster domain HB366_15070 PF00146 NADH dehydrogenase HB366_15075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HB366_15075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HB366_15075 PF00384 Molybdopterin oxidoreductase HB366_15080 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HB366_15080 PF10531 SLBB domain HB366_15080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HB366_15090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HB366_15090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HB366_15095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HB366_15100 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HB366_15105 PF17151 Periplasmic sensor domain HB366_15105 PF00990 Diguanylate cyclase, GGDEF domain HB366_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_15115 PF00512 His Kinase A (phospho-acceptor) domain HB366_15115 PF00672 HAMP domain HB366_15120 PF00486 Transcriptional regulatory protein, C terminal HB366_15120 PF00072 Response regulator receiver domain HB366_15130 PF03477 ATP cone domain HB366_15130 PF02867 Ribonucleotide reductase, barrel domain HB366_15130 PF00317 Ribonucleotide reductase, all-alpha domain HB366_15140 PF00268 Ribonucleotide reductase, small chain HB366_15150 PF00672 HAMP domain HB366_15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_15150 PF00512 His Kinase A (phospho-acceptor) domain HB366_15150 PF13755 Sensor N-terminal transmembrane domain HB366_15150 PF13756 Stimulus-sensing domain HB366_15220 PF13360 PQQ-like domain HB366_15220 PF01011 PQQ enzyme repeat HB366_15240 PF02567 Phenazine biosynthesis-like protein HB366_15260 PF01613 Flavin reductase like domain HB366_15265 PF08267 Cobalamin-independent synthase, N-terminal domain HB366_15265 PF01717 Cobalamin-independent synthase, Catalytic domain HB366_15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_15275 PF03466 LysR substrate binding domain HB366_15280 PF01810 LysE type translocator HB366_15290 PF12833 Helix-turn-helix domain HB366_15290 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HB366_15295 PF01546 Peptidase family M20/M25/M40 HB366_15295 PF07687 Peptidase dimerisation domain HB366_15305 PF03466 LysR substrate binding domain HB366_15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_15310 PF07690 Major Facilitator Superfamily HB366_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_15320 PF03466 LysR substrate binding domain HB366_15325 PF14537 Cytochrome c3 HB366_15325 PF00890 FAD binding domain HB366_15335 PF02515 CoA-transferase family III HB366_15340 PF07690 Major Facilitator Superfamily HB366_15345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_15345 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_15345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_15350 PF03466 LysR substrate binding domain HB366_15355 PF08240 Alcohol dehydrogenase GroES-like domain HB366_15355 PF00107 Zinc-binding dehydrogenase HB366_15360 PF00962 Adenosine/AMP deaminase HB366_15385 PF02445 Quinolinate synthetase A protein HB366_15390 PF01960 ArgJ family HB366_15395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HB366_15395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HB366_15400 PF00893 Small Multidrug Resistance protein HB366_15410 PF05275 Copper resistance protein B precursor (CopB) HB366_15415 PF07731 Multicopper oxidase HB366_15415 PF07732 Multicopper oxidase HB366_15415 PF00394 Multicopper oxidase HB366_15430 PF00834 Ribulose-phosphate 3 epimerase family HB366_15440 PF00756 Putative esterase HB366_15450 PF04445 Putative SAM-dependent methyltransferase HB366_15455 PF00814 Glycoprotease family HB366_15460 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_15465 PF00293 NUDIX domain HB366_15505 PF04715 Anthranilate synthase component I, N terminal region HB366_15505 PF00425 chorismate binding enzyme HB366_15510 PF00155 Aminotransferase class I and II HB366_15515 PF00815 Histidinol dehydrogenase HB366_15520 PF01634 ATP phosphoribosyltransferase HB366_15525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HB366_15530 PF01722 BolA-like protein HB366_15535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HB366_15540 PF04963 Sigma-54 factor, core binding domain HB366_15540 PF04552 Sigma-54, DNA binding domain HB366_15540 PF00309 Sigma-54 factor, Activator interacting domain (AID) HB366_15585 PF00795 Carbon-nitrogen hydrolase HB366_15595 PF01047 MarR family HB366_15600 PF02566 OsmC-like protein HB366_15605 PF00437 Type II/IV secretion system protein HB366_15635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HB366_15635 PF00476 DNA polymerase family A HB366_15635 PF01367 5'-3' exonuclease, C-terminal SAM fold HB366_15635 PF01612 3'-5' exonuclease HB366_15640 PF02325 YGGT family HB366_15645 PF03807 NADP oxidoreductase coenzyme F420-dependent HB366_15645 PF14748 Pyrroline-5-carboxylate reductase dimerisation HB366_15650 PF01171 PP-loop family HB366_15650 PF09179 TilS substrate binding domain HB366_15650 PF11734 TilS substrate C-terminal domain HB366_15655 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HB366_15660 PF02541 Ppx/GppA phosphatase family HB366_15665 PF00085 Thioredoxin HB366_15670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HB366_15670 PF07497 Rho termination factor, RNA-binding domain HB366_15670 PF07498 Rho termination factor, N-terminal domain HB366_15685 PF00216 Bacterial DNA-binding protein HB366_15690 PF03147 Ferredoxin-fold anticodon binding domain HB366_15690 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HB366_15690 PF03483 B3/4 domain HB366_15690 PF01588 Putative tRNA binding domain HB366_15690 PF03484 tRNA synthetase B5 domain HB366_15695 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HB366_15695 PF01409 tRNA synthetases class II core domain (F) HB366_15715 PF00453 Ribosomal protein L20 HB366_15720 PF01632 Ribosomal protein L35 HB366_15725 PF07690 Major Facilitator Superfamily HB366_15730 PF09335 SNARE associated Golgi protein HB366_15735 PF00043 Glutathione S-transferase, C-terminal domain HB366_15735 PF02798 Glutathione S-transferase, N-terminal domain HB366_15740 PF05198 Translation initiation factor IF-3, N-terminal domain HB366_15740 PF00707 Translation initiation factor IF-3, C-terminal domain HB366_15745 PF02824 TGS domain HB366_15745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HB366_15745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HB366_15745 PF03129 Anticodon binding domain HB366_15750 PF13193 AMP-binding enzyme C-terminal domain HB366_15750 PF00501 AMP-binding enzyme HB366_15755 PF04751 Protein of unknown function (DUF615) HB366_15760 PF00381 PTS HPr component phosphorylation site HB366_15765 PF03668 P-loop ATPase protein family HB366_15770 PF02569 Pantoate-beta-alanine ligase HB366_15775 PF02548 Ketopantoate hydroxymethyltransferase HB366_15780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HB366_15785 PF12627 Probable RNA and SrmB- binding site of polymerase A HB366_15785 PF12626 Polymerase A arginine-rich C-terminus HB366_15785 PF01743 Poly A polymerase head domain HB366_15795 PF03819 MazG nucleotide pyrophosphohydrolase domain HB366_15805 PF13291 ACT domain HB366_15805 PF04607 Region found in RelA / SpoT proteins HB366_15805 PF02824 TGS domain HB366_15810 PF05958 tRNA (Uracil-5-)-methyltransferase HB366_15820 PF00291 Pyridoxal-phosphate dependent enzyme HB366_15825 PF00072 Response regulator receiver domain HB366_15825 PF01627 Hpt domain HB366_15825 PF00672 HAMP domain HB366_15825 PF00512 His Kinase A (phospho-acceptor) domain HB366_15825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HB366_15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_15830 PF00378 Enoyl-CoA hydratase/isomerase HB366_15835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HB366_15835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HB366_15840 PF01261 Xylose isomerase-like TIM barrel HB366_15850 PF00106 short chain dehydrogenase HB366_15855 PF02233 NAD(P) transhydrogenase beta subunit HB366_15860 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HB366_15865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HB366_15865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HB366_15870 PF00892 EamA-like transporter family HB366_15880 PF07690 Major Facilitator Superfamily HB366_15885 PF01207 Dihydrouridine synthase (Dus) HB366_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_15895 PF03466 LysR substrate binding domain HB366_15905 PF00899 ThiF family HB366_15915 PF00330 Aconitase family (aconitate hydratase) HB366_15915 PF00694 Aconitase C-terminal domain HB366_15920 PF01026 TatD related DNase HB366_15935 PF16658 Class II release factor RF3, C-terminal domain HB366_15935 PF00009 Elongation factor Tu GTP binding domain HB366_15935 PF03144 Elongation factor Tu domain 2 HB366_15955 PF03707 Bacterial signalling protein N terminal repeat HB366_15955 PF00990 Diguanylate cyclase, GGDEF domain HB366_15955 PF00563 EAL domain HB366_15960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HB366_15960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HB366_15965 PF10369 Small subunit of acetolactate synthase HB366_15970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HB366_15970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HB366_15970 PF00205 Thiamine pyrophosphate enzyme, central domain HB366_15980 PF00133 tRNA synthetases class I (I, L, M and V) HB366_15980 PF08264 Anticodon-binding domain of tRNA HB366_15980 PF09334 tRNA synthetases class I (M) HB366_15980 PF13603 Leucyl-tRNA synthetase, Domain 2 HB366_15995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB366_16000 PF02687 FtsX-like permease family HB366_16000 PF12704 MacB-like periplasmic core domain HB366_16000 PF00005 ABC transporter HB366_16005 PF02321 Outer membrane efflux protein HB366_16020 PF00929 Exonuclease HB366_16025 PF03193 RsgA GTPase HB366_16035 PF00462 Glutaredoxin HB366_16040 PF02556 Preprotein translocase subunit SecB HB366_16055 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_16055 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_16070 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_16070 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_16080 PF04820 Tryptophan halogenase HB366_16100 PF00221 Aromatic amino acid lyase HB366_16115 PF00501 AMP-binding enzyme HB366_16115 PF13193 AMP-binding enzyme C-terminal domain HB366_16125 PF00550 Phosphopantetheine attachment site HB366_16130 PF00550 Phosphopantetheine attachment site HB366_16145 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HB366_16145 PF01926 50S ribosome-binding GTPase HB366_16150 PF13360 PQQ-like domain HB366_16160 PF03129 Anticodon binding domain HB366_16160 PF13393 Histidyl-tRNA synthetase HB366_16165 PF04551 GcpE protein HB366_16170 PF13464 Domain of unknown function (DUF4115) HB366_16180 PF04055 Radical SAM superfamily HB366_16185 PF00334 Nucleoside diphosphate kinase HB366_16190 PF04384 Iron-sulphur cluster assembly HB366_16195 PF01569 PAP2 superfamily HB366_16200 PF13439 Glycosyltransferase Family 4 HB366_16200 PF00534 Glycosyl transferases group 1 HB366_16205 PF00595 PDZ domain HB366_16205 PF03572 Peptidase family S41 HB366_16205 PF11818 C-terminal domain of tail specific protease (DUF3340) HB366_16205 PF17804 Tail specific protease N-terminal domain HB366_16210 PF00933 Glycosyl hydrolase family 3 N terminal domain HB366_16220 PF00561 alpha/beta hydrolase fold HB366_16225 PF00171 Aldehyde dehydrogenase family HB366_16230 PF00171 Aldehyde dehydrogenase family HB366_16235 PF01202 Shikimate kinase HB366_16240 PF02447 GntP family permease HB366_16245 PF01081 KDPG and KHG aldolase HB366_16250 PF00920 Dehydratase family HB366_16260 PF00871 Acetokinase family HB366_16265 PF07085 DRTGG domain HB366_16265 PF01515 Phosphate acetyl/butaryl transferase HB366_16270 PF05681 Fumarate hydratase (Fumerase) HB366_16270 PF05683 Fumarase C-terminus HB366_16285 PF07724 AAA domain (Cdc48 subfamily) HB366_16285 PF10431 C-terminal, D2-small domain, of ClpB protein HB366_16285 PF06689 ClpX C4-type zinc finger HB366_16290 PF00574 Clp protease HB366_16295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB366_16295 PF05698 Bacterial trigger factor protein (TF) C-terminus HB366_16295 PF05697 Bacterial trigger factor protein (TF) HB366_16305 PF18331 PKHD-type hydroxylase C-terminal domain HB366_16305 PF13640 2OG-Fe(II) oxygenase superfamily HB366_16310 PF08502 LeuA allosteric (dimerisation) domain HB366_16310 PF00682 HMGL-like HB366_16315 PF00561 alpha/beta hydrolase fold HB366_16320 PF07021 Methionine biosynthesis protein MetW HB366_16320 PF00561 alpha/beta hydrolase fold HB366_16330 PF01725 Ham1 family HB366_16340 PF02416 mttA/Hcf106 family HB366_16345 PF02416 mttA/Hcf106 family HB366_16350 PF00902 Sec-independent protein translocase protein (TatC) HB366_16370 PF01790 Prolipoprotein diacylglyceryl transferase HB366_16385 PF00303 Thymidylate synthase HB366_16390 PF00186 Dihydrofolate reductase HB366_16400 PF01625 Peptide methionine sulfoxide reductase HB366_16410 PF01618 MotA/TolQ/ExbB proton channel family HB366_16420 PF00551 Formyl transferase HB366_16420 PF01842 ACT domain HB366_16430 PF00171 Aldehyde dehydrogenase family HB366_16435 PF00830 Ribosomal L28 family HB366_16440 PF00471 Ribosomal protein L33 HB366_16445 PF02254 TrkA-N domain HB366_16445 PF00999 Sodium/hydrogen exchanger family HB366_16465 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HB366_16470 PF13361 UvrD-like helicase C-terminal domain HB366_16470 PF00580 UvrD/REP helicase N-terminal domain HB366_16485 PF01396 Topoisomerase DNA binding C4 zinc finger HB366_16485 PF08272 Topoisomerase I zinc-ribbon-like HB366_16485 PF01131 DNA topoisomerase HB366_16485 PF01751 Toprim domain HB366_16495 PF01638 HxlR-like helix-turn-helix HB366_16500 PF00107 Zinc-binding dehydrogenase HB366_16500 PF08240 Alcohol dehydrogenase GroES-like domain HB366_16505 PF04102 SlyX HB366_16515 PF01810 LysE type translocator HB366_16520 PF03279 Bacterial lipid A biosynthesis acyltransferase HB366_16530 PF00375 Sodium:dicarboxylate symporter family HB366_16540 PF02774 Semialdehyde dehydrogenase, dimerisation domain HB366_16540 PF01118 Semialdehyde dehydrogenase, NAD binding domain HB366_16560 PF01416 tRNA pseudouridine synthase HB366_16570 PF01176 Translation initiation factor 1A / IF-1 HB366_16585 PF00180 Isocitrate/isopropylmalate dehydrogenase HB366_16595 PF00694 Aconitase C-terminal domain HB366_16600 PF00330 Aconitase family (aconitate hydratase) HB366_16610 PF03466 LysR substrate binding domain HB366_16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_16630 PF00293 NUDIX domain HB366_16635 PF01590 GAF domain HB366_16635 PF02896 PEP-utilising enzyme, TIM barrel domain HB366_16635 PF05524 PEP-utilising enzyme, N-terminal HB366_16635 PF00391 PEP-utilising enzyme, mobile domain HB366_16640 PF00141 Peroxidase HB366_16645 PF12706 Beta-lactamase superfamily domain HB366_16650 PF03466 LysR substrate binding domain HB366_16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_16660 PF02798 Glutathione S-transferase, N-terminal domain HB366_16665 PF13280 WYL domain HB366_16665 PF08279 HTH domain HB366_16670 PF13419 Haloacid dehalogenase-like hydrolase HB366_16675 PF00849 RNA pseudouridylate synthase HB366_16675 PF01479 S4 domain HB366_16685 PF00575 S1 RNA binding domain HB366_16685 PF10150 Ribonuclease E/G family HB366_16685 PF12111 Polyribonucleotide phosphorylase C terminal HB366_16690 PF00501 AMP-binding enzyme HB366_16690 PF13193 AMP-binding enzyme C-terminal domain HB366_16705 PF03466 LysR substrate binding domain HB366_16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB366_16710 PF00106 short chain dehydrogenase HB366_16715 PF04055 Radical SAM superfamily HB366_16715 PF06969 HemN C-terminal domain HB366_16725 PF01554 MatE HB366_16730 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_16730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_16730 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB366_16735 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB366_16735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_16740 PF03109 ABC1 family HB366_16745 PF01197 Ribosomal protein L31 HB366_16760 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HB366_16780 PF03884 DNA gyrase inhibitor YacG HB366_16785 PF00753 Metallo-beta-lactamase superfamily HB366_16790 PF00762 Ferrochelatase HB366_16800 PF01177 Asp/Glu/Hydantoin racemase HB366_16815 PF01206 Sulfurtransferase TusA HB366_16820 PF03471 Transporter associated domain HB366_16820 PF00571 CBS domain HB366_16825 PF00795 Carbon-nitrogen hydrolase HB366_16830 PF01588 Putative tRNA binding domain HB366_16840 PF08334 Type II secretion system (T2SS), protein G HB366_16840 PF07963 Prokaryotic N-terminal methylation motif HB366_16845 PF00482 Type II secretion system (T2SS), protein F HB366_16850 PF18074 Primosomal protein N C-terminal domain HB366_16850 PF17764 3′ DNA-binding domain (3′BD) HB366_16850 PF00270 DEAD/DEAH box helicase HB366_16850 PF00271 Helicase conserved C-terminal domain HB366_16850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HB366_16855 PF02254 TrkA-N domain HB366_16855 PF00999 Sodium/hydrogen exchanger family HB366_16860 PF01430 Hsp33 protein HB366_16870 PF00226 DnaJ domain HB366_16870 PF01556 DnaJ C terminal domain HB366_16880 PF01544 CorA-like Mg2+ transporter protein HB366_16885 PF03725 3' exoribonuclease family, domain 2 HB366_16885 PF01138 3' exoribonuclease family, domain 1 HB366_16885 PF00013 KH domain HB366_16885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HB366_16885 PF00575 S1 RNA binding domain HB366_16890 PF00312 Ribosomal protein S15 HB366_16900 PF13538 UvrD-like helicase C-terminal domain HB366_16905 PF00580 UvrD/REP helicase N-terminal domain HB366_16905 PF12705 PD-(D/E)XK nuclease superfamily HB366_16905 PF13361 UvrD-like helicase C-terminal domain HB366_16910 PF17946 RecC C-terminal domain HB366_16920 PF03976 Polyphosphate kinase 2 (PPK2) HB366_16930 PF01209 ubiE/COQ5 methyltransferase family HB366_16940 PF03109 ABC1 family HB366_16945 PF01494 FAD binding domain HB366_16950 PF01502 Phosphoribosyl-AMP cyclohydrolase HB366_16965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HB366_16965 PF00361 Proton-conducting membrane transporter HB366_16965 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HB366_16965 PF13244 Domain of unknown function (DUF4040) HB366_16970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HB366_16975 PF00361 Proton-conducting membrane transporter HB366_16985 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HB366_16995 PF02033 Ribosome-binding factor A HB366_17000 PF08364 Bacterial translation initiation factor IF-2 associated region HB366_17000 PF04760 Translation initiation factor IF-2, N-terminal region HB366_17000 PF00009 Elongation factor Tu GTP binding domain HB366_17000 PF11987 Translation-initiation factor 2 HB366_17005 PF13184 NusA-like KH domain HB366_17005 PF08529 NusA N-terminal domain HB366_17005 PF00575 S1 RNA binding domain HB366_17010 PF17384 RimP C-terminal SH3 domain HB366_17010 PF02576 RimP N-terminal domain HB366_17030 PF03840 Preprotein translocase SecG subunit HB366_17035 PF00121 Triosephosphate isomerase HB366_17040 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HB366_17040 PF00437 Type II/IV secretion system protein HB366_17045 PF00482 Type II secretion system (T2SS), protein F HB366_17050 PF01478 Type IV leader peptidase family HB366_17050 PF06750 Bacterial Peptidase A24 N-terminal domain HB366_17055 PF01121 Dephospho-CoA kinase HB366_17065 PF08032 RNA 2'-O ribose methyltransferase substrate binding HB366_17065 PF00588 SpoU rRNA Methylase family HB366_17070 PF06865 Pyrimidine/purine nucleoside phosphorylase HB366_17080 PF02463 RecF/RecN/SMC N terminal domain HB366_17085 PF02622 Uncharacterized ACR, COG1678 HB366_17090 PF03652 Holliday junction resolvase HB366_17095 PF13533 Biotin-lipoyl like HB366_17120 PF02805 Metal binding domain of Ada HB366_17120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HB366_17120 PF12833 Helix-turn-helix domain HB366_17120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HB366_17125 PF01066 CDP-alcohol phosphatidyltransferase HB366_17135 PF08459 UvrC Helix-hairpin-helix N-terminal HB366_17135 PF02151 UvrB/uvrC motif HB366_17135 PF01541 GIY-YIG catalytic domain HB366_17155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB366_17155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB366_17155 PF00378 Enoyl-CoA hydratase/isomerase HB366_17160 PF00108 Thiolase, N-terminal domain HB366_17160 PF02803 Thiolase, C-terminal domain HB366_17180 PF00376 MerR family regulatory protein HB366_17180 PF09278 MerR, DNA binding HB366_17190 PF01323 DSBA-like thioredoxin domain HB366_17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_17205 PF00183 Hsp90 protein HB366_17220 PF13726 Na+-H+ antiporter family HB366_17220 PF03553 Na+/H+ antiporter family HB366_17225 PF00561 alpha/beta hydrolase fold HB366_17245 PF00623 RNA polymerase Rpb1, domain 2 HB366_17245 PF04998 RNA polymerase Rpb1, domain 5 HB366_17245 PF04983 RNA polymerase Rpb1, domain 3 HB366_17245 PF04997 RNA polymerase Rpb1, domain 1 HB366_17245 PF05000 RNA polymerase Rpb1, domain 4 HB366_17250 PF00562 RNA polymerase Rpb2, domain 6 HB366_17250 PF04560 RNA polymerase Rpb2, domain 7 HB366_17250 PF10385 RNA polymerase beta subunit external 1 domain HB366_17250 PF04565 RNA polymerase Rpb2, domain 3 HB366_17250 PF04561 RNA polymerase Rpb2, domain 2 HB366_17250 PF04563 RNA polymerase beta subunit HB366_17255 PF16320 Ribosomal protein L7/L12 dimerisation domain HB366_17255 PF00542 Ribosomal protein L7/L12 C-terminal domain HB366_17260 PF00466 Ribosomal protein L10 HB366_17265 PF00687 Ribosomal protein L1p/L10e family HB366_17270 PF00298 Ribosomal protein L11, RNA binding domain HB366_17270 PF03946 Ribosomal protein L11, N-terminal domain HB366_17275 PF00467 KOW motif HB366_17275 PF02357 Transcription termination factor nusG HB366_17280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HB366_17290 PF03144 Elongation factor Tu domain 2 HB366_17290 PF03143 Elongation factor Tu C-terminal domain HB366_17290 PF00009 Elongation factor Tu GTP binding domain HB366_17315 PF04715 Anthranilate synthase component I, N terminal region HB366_17315 PF00425 chorismate binding enzyme HB366_17320 PF13419 Haloacid dehalogenase-like hydrolase HB366_17325 PF00498 FHA domain HB366_17325 PF12401 Protein of unknown function (DUF2662) HB366_17330 PF03958 Bacterial type II/III secretion system short domain HB366_17330 PF00263 Bacterial type II and III secretion system protein HB366_17345 PF00816 H-NS histone family HB366_17370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HB366_17370 PF03900 Porphobilinogen deaminase, C-terminal domain HB366_17375 PF04397 LytTr DNA-binding domain HB366_17375 PF00072 Response regulator receiver domain HB366_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_17380 PF06580 Histidine kinase HB366_17380 PF07694 5TMR of 5TMR-LYT HB366_17385 PF00206 Lyase HB366_17385 PF14698 Argininosuccinate lyase C-terminal HB366_17390 PF04362 Bacterial Fe(2+) trafficking HB366_17395 PF01895 PhoU domain HB366_17400 PF02321 Outer membrane efflux protein HB366_17405 PF00892 EamA-like transporter family HB366_17420 PF13667 ThiC-associated domain HB366_17420 PF01964 Radical SAM ThiC family HB366_17425 PF00293 NUDIX domain HB366_17430 PF00149 Calcineurin-like phosphoesterase HB366_17435 PF01258 Prokaryotic dksA/traR C4-type zinc finger HB366_17440 PF00749 tRNA synthetases class I (E and Q), catalytic domain HB366_17445 PF01098 Cell cycle protein HB366_17450 PF08245 Mur ligase middle domain HB366_17450 PF02875 Mur ligase family, glutamate ligase domain HB366_17460 PF07664 Ferrous iron transport protein B C terminus HB366_17460 PF02421 Ferrous iron transport protein B HB366_17460 PF07670 Nucleoside recognition HB366_17470 PF00589 Phage integrase family HB366_17470 PF02899 Phage integrase, N-terminal SAM-like domain HB366_17475 PF13098 Thioredoxin-like domain HB366_17475 PF10411 Disulfide bond isomerase protein N-terminus HB366_17480 PF01842 ACT domain HB366_17480 PF00742 Homoserine dehydrogenase HB366_17480 PF03447 Homoserine dehydrogenase, NAD binding domain HB366_17485 PF00291 Pyridoxal-phosphate dependent enzyme HB366_17490 PF00768 D-alanyl-D-alanine carboxypeptidase HB366_17495 PF00072 Response regulator receiver domain HB366_17495 PF00196 Bacterial regulatory proteins, luxR family HB366_17500 PF00512 His Kinase A (phospho-acceptor) domain HB366_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB366_17505 PF00158 Sigma-54 interaction domain HB366_17505 PF00072 Response regulator receiver domain HB366_17505 PF02954 Bacterial regulatory protein, Fis family HB366_17510 PF03572 Peptidase family S41 HB366_17510 PF00595 PDZ domain HB366_17515 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HB366_17515 PF01676 Metalloenzyme superfamily HB366_17520 PF03739 Lipopolysaccharide export system permease LptF/LptG HB366_17530 PF02789 Cytosol aminopeptidase family, N-terminal domain HB366_17530 PF00883 Cytosol aminopeptidase family, catalytic domain HB366_17550 PF00677 Lumazine binding domain HB366_17560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HB366_17560 PF01872 RibD C-terminal domain HB366_17565 PF03477 ATP cone domain HB366_17570 PF00909 Ammonium Transporter Family HB366_17575 PF00543 Nitrogen regulatory protein P-II HB366_17585 PF01078 Magnesium chelatase, subunit ChlI HB366_17585 PF13335 Magnesium chelatase, subunit ChlI C-terminal HB366_17595 PF01636 Phosphotransferase enzyme family HB366_17600 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HB366_17630 PF00440 Bacterial regulatory proteins, tetR family HB366_17630 PF02909 Tetracyclin repressor-like, C-terminal domain HB366_17635 PF07690 Major Facilitator Superfamily HB366_17650 PF00905 Penicillin binding protein transpeptidase domain HB366_17675 PF00916 Sulfate permease family HB366_17675 PF01740 STAS domain HB366_17680 PF00582 Universal stress protein family HB366_17710 PF00665 Integrase core domain HB366_17725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB366_17725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB366_17725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB366_17725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB366_17730 PF00809 Pterin binding enzyme HB366_17750 PF00665 Integrase core domain HB366_17780 PF00905 Penicillin binding protein transpeptidase domain HB366_17805 PF02899 Phage integrase, N-terminal SAM-like domain HB366_17805 PF00589 Phage integrase family HB366_17835 PF01740 STAS domain HB366_17835 PF00916 Sulfate permease family HB366_17840 PF00582 Universal stress protein family HB366_17860 PF00665 Integrase core domain HB366_17870 PF01078 Magnesium chelatase, subunit ChlI HB366_17870 PF13335 Magnesium chelatase, subunit ChlI C-terminal HB366_17885 PF00701 Dihydrodipicolinate synthetase family HB366_17895 PF03573 outer membrane porin, OprD family HB366_17900 PF00719 Inorganic pyrophosphatase HB366_17915 PF00501 AMP-binding enzyme HB366_17915 PF13193 AMP-binding enzyme C-terminal domain HB366_17920 PF00521 DNA gyrase/topoisomerase IV, subunit A HB366_17920 PF03989 DNA gyrase C-terminal domain, beta-propeller HB366_17925 PF07690 Major Facilitator Superfamily HB366_17930 PF03458 UPF0126 domain HB366_17935 PF02810 SEC-C motif HB366_17940 PF03471 Transporter associated domain HB366_17940 PF03741 Integral membrane protein TerC family HB366_17945 PF03641 Possible lysine decarboxylase HB366_17950 PF07690 Major Facilitator Superfamily HB366_17960 PF11798 IMS family HHH motif HB366_17960 PF00817 impB/mucB/samB family HB366_17960 PF11799 impB/mucB/samB family C-terminal domain HB366_17975 PF08497 Radical SAM N-terminal HB366_17975 PF04055 Radical SAM superfamily HB366_17975 PF11842 Domain of unknown function (DUF3362) HB366_17995 PF03358 NADPH-dependent FMN reductase HB366_18005 PF00291 Pyridoxal-phosphate dependent enzyme HB366_18040 PF00440 Bacterial regulatory proteins, tetR family HB366_18065 PF01327 Polypeptide deformylase HB366_18075 PF17782 DprA winged helix domain HB366_18075 PF02481 DNA recombination-mediator protein A HB366_18080 PF01300 Telomere recombination HB366_18085 PF00892 EamA-like transporter family HB366_18090 PF00440 Bacterial regulatory proteins, tetR family HB366_18095 PF07690 Major Facilitator Superfamily HB366_18105 PF00255 Glutathione peroxidase HB366_18115 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HB366_18120 PF02874 ATP synthase alpha/beta family, beta-barrel domain HB366_18120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HB366_18125 PF00231 ATP synthase HB366_18130 PF02874 ATP synthase alpha/beta family, beta-barrel domain HB366_18130 PF00306 ATP synthase alpha/beta chain, C terminal domain HB366_18130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HB366_18135 PF00213 ATP synthase delta (OSCP) subunit HB366_18140 PF00430 ATP synthase B/B' CF(0) HB366_18145 PF00137 ATP synthase subunit C HB366_18150 PF00119 ATP synthase A chain HB366_18170 PF00005 ABC transporter HB366_18175 PF00950 ABC 3 transport family HB366_18180 PF01810 LysE type translocator HB366_18185 PF04261 Dyp-type peroxidase family HB366_18195 PF00390 Malic enzyme, N-terminal domain HB366_18195 PF03949 Malic enzyme, NAD binding domain HB366_18200 PF00750 tRNA synthetases class I (R) HB366_18200 PF05746 DALR anticodon binding domain HB366_18200 PF03485 Arginyl tRNA synthetase N terminal domain HB366_18220 PF02678 Pirin HB366_18220 PF05726 Pirin C-terminal cupin domain HB366_18230 PF03551 Transcriptional regulator PadR-like family HB366_18235 PF13427 Domain of unknown function (DUF4111) HB366_18235 PF01909 Nucleotidyltransferase domain HB366_18240 PF00117 Glutamine amidotransferase class-I HB366_18240 PF02540 NAD synthase HB366_18240 PF00958 GMP synthase C terminal domain HB366_18245 PF04286 Protein of unknown function (DUF445) HB366_18250 PF07681 DoxX HB366_18255 PF09335 SNARE associated Golgi protein HB366_18270 PF13614 AAA domain HB366_18280 PF01722 BolA-like protein HB366_18295 PF01648 4'-phosphopantetheinyl transferase superfamily HB366_18300 PF12697 Alpha/beta hydrolase family HB366_18320 PF00975 Thioesterase domain HB366_18320 PF16197 Ketoacyl-synthetase C-terminal extension HB366_18320 PF00550 Phosphopantetheine attachment site HB366_18320 PF08242 Methyltransferase domain HB366_18320 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_18320 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_18320 PF14765 Polyketide synthase dehydratase HB366_18325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_18325 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_18325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_18330 PF00501 AMP-binding enzyme HB366_18335 PF03472 Autoinducer binding domain HB366_18335 PF00196 Bacterial regulatory proteins, luxR family HB366_18345 PF00765 Autoinducer synthase HB366_18350 PF07690 Major Facilitator Superfamily HB366_18350 PF00083 Sugar (and other) transporter HB366_18355 PF00378 Enoyl-CoA hydratase/isomerase HB366_18360 PF00378 Enoyl-CoA hydratase/isomerase HB366_18365 PF02770 Acyl-CoA dehydrogenase, middle domain HB366_18365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB366_18365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB366_18370 PF13193 AMP-binding enzyme C-terminal domain HB366_18370 PF00501 AMP-binding enzyme HB366_18375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HB366_18375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HB366_18380 PF00171 Aldehyde dehydrogenase family HB366_18390 PF00324 Amino acid permease HB366_18395 PF00324 Amino acid permease HB366_18400 PF01042 Endoribonuclease L-PSP HB366_18405 PF00842 Alanine racemase, C-terminal domain HB366_18405 PF01168 Alanine racemase, N-terminal domain HB366_18410 PF01266 FAD dependent oxidoreductase HB366_18415 PF01037 Lrp/AsnC ligand binding domain HB366_18425 PF07715 TonB-dependent Receptor Plug Domain HB366_18425 PF00593 TonB dependent receptor HB366_18440 PF00849 RNA pseudouridylate synthase HB366_18455 PF08361 MAATS-type transcriptional repressor, C-terminal region HB366_18455 PF00440 Bacterial regulatory proteins, tetR family HB366_18465 PF02801 Beta-ketoacyl synthase, C-terminal domain HB366_18465 PF00109 Beta-ketoacyl synthase, N-terminal domain HB366_18500 PF00330 Aconitase family (aconitate hydratase) HB366_18500 PF00694 Aconitase C-terminal domain HB366_18505 PF00285 Citrate synthase, C-terminal domain HB366_18515 PF00392 Bacterial regulatory proteins, gntR family HB366_18515 PF07729 FCD domain HB366_18525 PF00155 Aminotransferase class I and II HB366_18530 PF01565 FAD binding domain HB366_18530 PF09330 D-lactate dehydrogenase, membrane binding HB366_18535 PF01070 FMN-dependent dehydrogenase HB366_18540 PF07729 FCD domain HB366_18540 PF00392 Bacterial regulatory proteins, gntR family HB366_18545 PF02652 L-lactate permease HB366_18550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB366_18550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB366_18550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB366_18550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB366_18555 PF16363 GDP-mannose 4,6 dehydratase HB366_18560 PF00342 Phosphoglucose isomerase HB366_18565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HB366_18565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HB366_18565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HB366_18570 PF00483 Nucleotidyl transferase HB366_18575 PF02397 Bacterial sugar transferase HB366_18580 PF00535 Glycosyl transferase family 2 HB366_18585 PF00534 Glycosyl transferases group 1 HB366_18600 PF13439 Glycosyltransferase Family 4 HB366_18600 PF00534 Glycosyl transferases group 1 HB366_18605 PF12464 Maltose acetyltransferase HB366_18605 PF14602 Hexapeptide repeat of succinyl-transferase HB366_18605 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_18615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HB366_18620 PF00132 Bacterial transferase hexapeptide (six repeats) HB366_18625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HB366_18625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HB366_18630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HB366_18630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HB366_18630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HB366_18635 PF10531 SLBB domain HB366_18635 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HB366_18635 PF02563 Polysaccharide biosynthesis/export protein HB366_18640 PF01451 Low molecular weight phosphotyrosine protein phosphatase HB366_18645 PF13807 G-rich domain on putative tyrosine kinase HB366_18645 PF02706 Chain length determinant protein HB366_18645 PF13614 AAA domain HB366_18650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HB366_18650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB366_18655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HB366_18655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB366_18660 PF03023 Lipid II flippase MurJ HB366_18665 PF01510 N-acetylmuramoyl-L-alanine amidase HB366_18670 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HB366_18670 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HB366_18680 PF04185 Phosphoesterase family HB366_18680 PF05506 Domain of unknown function (DUF756) HB366_18685 PF01138 3' exoribonuclease family, domain 1 HB366_18685 PF03725 3' exoribonuclease family, domain 2 HB366_18690 PF00487 Fatty acid desaturase HB366_18695 PF00175 Oxidoreductase NAD-binding domain HB366_18700 PF00440 Bacterial regulatory proteins, tetR family HB366_18705 PF08360 QacR-like protein, C-terminal region HB366_18705 PF00440 Bacterial regulatory proteins, tetR family HB366_18710 PF01323 DSBA-like thioredoxin domain HB366_18720 PF13419 Haloacid dehalogenase-like hydrolase HB366_18725 PF00106 short chain dehydrogenase HB366_18740 PF00583 Acetyltransferase (GNAT) family HB366_18740 PF00696 Amino acid kinase family HB366_18745 PF09084 NMT1/THI5 like HB366_18750 PF09084 NMT1/THI5 like HB366_18755 PF00296 Luciferase-like monooxygenase HB366_18760 PF00528 Binding-protein-dependent transport system inner membrane component HB366_18765 PF00005 ABC transporter HB366_18770 PF08362 YcdC-like protein, C-terminal region HB366_18770 PF00440 Bacterial regulatory proteins, tetR family HB366_18775 PF01048 Phosphorylase superfamily HB366_18785 PF01687 Riboflavin kinase HB366_18785 PF06574 FAD synthetase HB366_18790 PF08264 Anticodon-binding domain of tRNA HB366_18790 PF00133 tRNA synthetases class I (I, L, M and V) HB366_18790 PF06827 Zinc finger found in FPG and IleRS HB366_18795 PF01252 Signal peptidase (SPase) II HB366_18800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB366_18840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HB366_18845 PF07859 alpha/beta hydrolase fold HB366_18870 PF01025 GrpE HB366_18875 PF00012 Hsp70 protein HB366_18895 PF13406 Transglycosylase SLT domain HB366_18900 PF02222 ATP-grasp domain HB366_18900 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HB366_18905 PF00731 AIR carboxylase HB366_18915 PF02875 Mur ligase family, glutamate ligase domain HB366_18915 PF01225 Mur ligase family, catalytic domain HB366_18915 PF08245 Mur ligase middle domain HB366_18925 PF01569 PAP2 superfamily HB366_18930 PF03741 Integral membrane protein TerC family HB366_18940 PF03738 Glutathionylspermidine synthase preATP-grasp HB366_18945 PF00355 Rieske [2Fe-2S] domain HB366_18950 PF01979 Amidohydrolase family HB366_18955 PF00156 Phosphoribosyl transferase domain HB366_18965 PF10411 Disulfide bond isomerase protein N-terminus HB366_18965 PF13098 Thioredoxin-like domain HB366_18970 PF16916 Dimerisation domain of Zinc Transporter HB366_18970 PF01545 Cation efflux family HB366_18975 PF02583 Metal-sensitive transcriptional repressor HB366_18980 PF10396 GTP-binding protein TrmE N-terminus HB366_18980 PF12631 MnmE helical domain HB366_18980 PF01926 50S ribosome-binding GTPase HB366_18985 PF14849 YidC periplasmic domain HB366_18985 PF02096 60Kd inner membrane protein HB366_18990 PF01809 Putative membrane protein insertion efficiency factor HB366_18995 PF00825 Ribonuclease P HB366_19000 PF00468 Ribosomal protein L34 HB366_19055 PF00565 Staphylococcal nuclease homologue HB366_19060 PF00816 H-NS histone family HB366_19110 PF13614 AAA domain HB366_19115 PF17762 HTH domain found in ParB protein HB366_19115 PF02195 ParB-like nuclease domain HB366_19130 PF05816 Toxic anion resistance protein (TelA) HB366_19215 PF01556 DnaJ C terminal domain HB366_19215 PF00684 DnaJ central domain HB366_19215 PF00226 DnaJ domain HB366_19250 PF18272 single-stranded DNA binding TraI N-terminal subdomain HB366_19250 PF18340 DNA relaxase TraI 2B/2B-like domain HB366_19250 PF08751 TrwC relaxase HB366_19250 PF07057 DNA helicase TraI HB366_19280 PF00665 Integrase core domain HB366_19280 PF13936 Helix-turn-helix domain HB366_19285 PF01636 Phosphotransferase enzyme family HB366_19290 PF13936 Helix-turn-helix domain HB366_19290 PF00665 Integrase core domain HB366_19300 PF02796 Helix-turn-helix domain of resolvase HB366_19300 PF00239 Resolvase, N terminal domain HB366_19315 PF01464 Transglycosylase SLT domain HB366_19350 PF13098 Thioredoxin-like domain HB366_19350 PF10411 Disulfide bond isomerase protein N-terminus HB366_19385 PF06834 TraU protein HB366_19395 PF06986 Type-1V conjugative transfer system mating pair stabilisation HB366_19410 PF06122 Conjugative relaxosome accessory transposon protein HB366_19430 PF11799 impB/mucB/samB family C-terminal domain HB366_19430 PF13438 Domain of unknown function (DUF4113) HB366_19430 PF00817 impB/mucB/samB family HB366_19430 PF11798 IMS family HHH motif HB366_19480 PF07715 TonB-dependent Receptor Plug Domain HB366_19480 PF00593 TonB dependent receptor