locus-tag class description HB368_00005 PF11638 DnaA N-terminal domain HB368_00005 PF00308 Bacterial dnaA protein HB368_00005 PF08299 Bacterial dnaA protein helix-turn-helix HB368_00010 PF02767 DNA polymerase III beta subunit, central domain HB368_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HB368_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HB368_00015 PF02463 RecF/RecN/SMC N terminal domain HB368_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HB368_00020 PF01751 Toprim domain HB368_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_00020 PF18053 DNA gyrase B subunit insert domain HB368_00020 PF00204 DNA gyrase B HB368_00030 PF09335 SNARE associated Golgi protein HB368_00035 PF00005 ABC transporter HB368_00035 PF12848 ABC transporter HB368_00055 PF01521 Iron-sulphur cluster biosynthesis HB368_00060 PF00561 alpha/beta hydrolase fold HB368_00065 PF03702 Anhydro-N-acetylmuramic acid kinase HB368_00070 PF00579 tRNA synthetases class I (W and Y) HB368_00115 PF00209 Sodium:neurotransmitter symporter family HB368_00125 PF01029 NusB family HB368_00125 PF01189 16S rRNA methyltransferase RsmB/F HB368_00130 PF00551 Formyl transferase HB368_00130 PF02911 Formyl transferase, C-terminal domain HB368_00135 PF00920 Dehydratase family HB368_00150 PF03466 LysR substrate binding domain HB368_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_00155 PF00860 Permease family HB368_00160 PF00311 Phosphoenolpyruvate carboxylase HB368_00165 PF08361 MAATS-type transcriptional repressor, C-terminal region HB368_00165 PF00440 Bacterial regulatory proteins, tetR family HB368_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_00175 PF00873 AcrB/AcrD/AcrF family HB368_00185 PF00226 DnaJ domain HB368_00185 PF00684 DnaJ central domain HB368_00185 PF01556 DnaJ C terminal domain HB368_00195 PF05173 Dihydrodipicolinate reductase, C-terminus HB368_00195 PF01113 Dihydrodipicolinate reductase, N-terminus HB368_00205 PF07690 Major Facilitator Superfamily HB368_00210 PF00248 Aldo/keto reductase family HB368_00215 PF03466 LysR substrate binding domain HB368_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_00230 PF00392 Bacterial regulatory proteins, gntR family HB368_00230 PF00155 Aminotransferase class I and II HB368_00235 PF00107 Zinc-binding dehydrogenase HB368_00235 PF08240 Alcohol dehydrogenase GroES-like domain HB368_00240 PF03352 Methyladenine glycosylase HB368_00255 PF10576 Iron-sulfur binding domain of endonuclease III HB368_00255 PF00633 Helix-hairpin-helix motif HB368_00255 PF14815 NUDIX domain HB368_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein HB368_00270 PF07043 Protein of unknown function (DUF1328) HB368_00275 PF03692 Putative zinc- or iron-chelating domain HB368_00280 PF07995 Glucose / Sorbosone dehydrogenase HB368_00285 PF12002 MgsA AAA+ ATPase C terminal HB368_00285 PF00004 ATPase family associated with various cellular activities (AAA) HB368_00285 PF16193 AAA C-terminal domain HB368_00290 PF01226 Formate/nitrite transporter HB368_00300 PF01259 SAICAR synthetase HB368_00310 PF00701 Dihydrodipicolinate synthetase family HB368_00315 PF00857 Isochorismatase family HB368_00320 PF01758 Sodium Bile acid symporter family HB368_00325 PF01554 MatE HB368_00330 PF04463 Protein of unknown function (DUF523) HB368_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB368_00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB368_00350 PF02798 Glutathione S-transferase, N-terminal domain HB368_00350 PF14497 Glutathione S-transferase, C-terminal domain HB368_00360 PF00324 Amino acid permease HB368_00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain HB368_00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain HB368_00380 PF00392 Bacterial regulatory proteins, gntR family HB368_00380 PF07702 UTRA domain HB368_00385 PF05962 HutD HB368_00390 PF17392 Urocanase C-terminal domain HB368_00390 PF17391 Urocanase N-terminal domain HB368_00390 PF01175 Urocanase Rossmann-like domain HB368_00395 PF00221 Aromatic amino acid lyase HB368_00400 PF00324 Amino acid permease HB368_00405 PF01979 Amidohydrolase family HB368_00410 PF00491 Arginase family HB368_00425 PF01177 Asp/Glu/Hydantoin racemase HB368_00430 PF01380 SIS domain HB368_00435 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_00435 PF14602 Hexapeptide repeat of succinyl-transferase HB368_00435 PF12804 MobA-like NTP transferase domain HB368_00440 PF04608 Phosphatidylglycerophosphatase A HB368_00445 PF00586 AIR synthase related protein, N-terminal domain HB368_00445 PF02769 AIR synthase related protein, C-terminal domain HB368_00450 PF01029 NusB family HB368_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase HB368_00460 PF00925 GTP cyclohydrolase II HB368_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HB368_00485 PF02580 D-Tyr-tRNA(Tyr) deacylase HB368_00490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HB368_00490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HB368_00495 PF00581 Rhodanese-like domain HB368_00500 PF02666 Phosphatidylserine decarboxylase HB368_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_00510 PF11808 Phosphate regulon sensor protein PhoR HB368_00510 PF00989 PAS fold HB368_00510 PF00512 His Kinase A (phospho-acceptor) domain HB368_00515 PF00072 Response regulator receiver domain HB368_00515 PF00486 Transcriptional regulatory protein, C terminal HB368_00525 PF00106 short chain dehydrogenase HB368_00535 PF00155 Aminotransferase class I and II HB368_00540 PF04286 Protein of unknown function (DUF445) HB368_00555 PF04262 Glutamate-cysteine ligase HB368_00560 PF02600 Disulfide bond formation protein DsbB HB368_00570 PF01636 Phosphotransferase enzyme family HB368_00575 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HB368_00600 PF03389 MobA/MobL family HB368_00600 PF17841 BID domain of Bartonella effector protein (Bep) HB368_00600 PF01443 Viral (Superfamily 1) RNA helicase HB368_00610 PF13610 DDE domain HB368_00625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB368_00625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB368_00625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB368_00625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB368_00630 PF00809 Pterin binding enzyme HB368_00640 PF04717 Type VI secretion system, phage-baseplate injector HB368_00700 PF05728 Uncharacterised protein family (UPF0227) HB368_00705 PF00986 DNA gyrase B subunit, carboxyl terminus HB368_00705 PF00204 DNA gyrase B HB368_00705 PF01751 Toprim domain HB368_00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_00710 PF00106 short chain dehydrogenase HB368_00715 PF04115 Ureidoglycolate lyase HB368_00720 PF03561 Allantoicase repeat HB368_00725 PF01494 FAD binding domain HB368_00730 PF13737 Transposase DDE domain HB368_00740 PF00860 Permease family HB368_00745 PF00576 HIUase/Transthyretin family HB368_00775 PF11412 Disulphide bond corrector protein DsbC HB368_00775 PF02683 Cytochrome C biogenesis protein transmembrane region HB368_00780 PF00990 Diguanylate cyclase, GGDEF domain HB368_00780 PF07694 5TMR of 5TMR-LYT HB368_00785 PF07859 alpha/beta hydrolase fold HB368_00795 PF03960 ArsC family HB368_00800 PF03372 Endonuclease/Exonuclease/phosphatase family HB368_00805 PF00156 Phosphoribosyl transferase domain HB368_00815 PF00593 TonB dependent receptor HB368_00815 PF07715 TonB-dependent Receptor Plug Domain HB368_00825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HB368_00825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HB368_00830 PF03033 Glycosyltransferase family 28 N-terminal domain HB368_00830 PF04101 Glycosyltransferase family 28 C-terminal domain HB368_00835 PF01225 Mur ligase family, catalytic domain HB368_00835 PF08245 Mur ligase middle domain HB368_00835 PF02875 Mur ligase family, glutamate ligase domain HB368_00840 PF01820 D-ala D-ala ligase N-terminus HB368_00840 PF07478 D-ala D-ala ligase C-terminus HB368_00845 PF08478 POTRA domain, FtsQ-type HB368_00845 PF03799 Cell division protein FtsQ HB368_00850 PF02491 SHS2 domain inserted in FTSA HB368_00855 PF00091 Tubulin/FtsZ family, GTPase domain HB368_00855 PF12327 FtsZ family, C-terminal domain HB368_00860 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HB368_00870 PF01551 Peptidase family M23 HB368_00875 PF00456 Transketolase, thiamine diphosphate binding domain HB368_00875 PF17831 Pyruvate dehydrogenase E1 component middle domain HB368_00880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HB368_00880 PF00364 Biotin-requiring enzyme HB368_00880 PF02817 e3 binding domain HB368_00890 PF01169 Uncharacterized protein family UPF0016 HB368_00895 PF07715 TonB-dependent Receptor Plug Domain HB368_00895 PF00593 TonB dependent receptor HB368_00900 PF00258 Flavodoxin HB368_00900 PF01613 Flavin reductase like domain HB368_00905 PF03692 Putative zinc- or iron-chelating domain HB368_00910 PF00478 IMP dehydrogenase / GMP reductase domain HB368_00910 PF00571 CBS domain HB368_00915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB368_00915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB368_00915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB368_00915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB368_00920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HB368_00920 PF01243 Pyridoxamine 5'-phosphate oxidase HB368_00925 PF01368 DHH family HB368_00925 PF17768 RecJ OB domain HB368_00925 PF02272 DHHA1 domain HB368_00945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_00950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HB368_00955 PF04452 RNA methyltransferase HB368_00960 PF00924 Mechanosensitive ion channel HB368_00970 PF00501 AMP-binding enzyme HB368_00970 PF13193 AMP-binding enzyme C-terminal domain HB368_00970 PF16177 Acetyl-coenzyme A synthetase N-terminus HB368_00975 PF00857 Isochorismatase family HB368_00980 PF01037 Lrp/AsnC ligand binding domain HB368_00985 PF00296 Luciferase-like monooxygenase HB368_00990 PF03358 NADPH-dependent FMN reductase HB368_00995 PF00196 Bacterial regulatory proteins, luxR family HB368_00995 PF00072 Response regulator receiver domain HB368_01005 PF01627 Hpt domain HB368_01005 PF00672 HAMP domain HB368_01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_01005 PF00072 Response regulator receiver domain HB368_01005 PF00512 His Kinase A (phospho-acceptor) domain HB368_01010 PF04341 Protein of unknown function, DUF485 HB368_01015 PF00474 Sodium:solute symporter family HB368_01025 PF02028 BCCT, betaine/carnitine/choline family transporter HB368_01035 PF00990 Diguanylate cyclase, GGDEF domain HB368_01035 PF17158 Membrane-associated sensor, integral membrane domain HB368_01040 PF17760 UvrA interaction domain HB368_01040 PF17755 UvrA DNA-binding domain HB368_01040 PF00005 ABC transporter HB368_01045 PF00440 Bacterial regulatory proteins, tetR family HB368_01045 PF16925 Tetracyclin repressor-like, C-terminal domain HB368_01050 PF00107 Zinc-binding dehydrogenase HB368_01050 PF08240 Alcohol dehydrogenase GroES-like domain HB368_01060 PF06942 GlpM protein HB368_01065 PF02581 Thiamine monophosphate synthase HB368_01065 PF08543 Phosphomethylpyrimidine kinase HB368_01065 PF03070 TENA/THI-4/PQQC family HB368_01075 PF07690 Major Facilitator Superfamily HB368_01080 PF00436 Single-strand binding protein family HB368_01090 PF03591 AzlC protein HB368_01100 PF00324 Amino acid permease HB368_01105 PF00392 Bacterial regulatory proteins, gntR family HB368_01105 PF00155 Aminotransferase class I and II HB368_01110 PF00202 Aminotransferase class-III HB368_01115 PF00171 Aldehyde dehydrogenase family HB368_01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_01125 PF00857 Isochorismatase family HB368_01130 PF05726 Pirin C-terminal cupin domain HB368_01130 PF02678 Pirin HB368_01135 PF01593 Flavin containing amine oxidoreductase HB368_01155 PF07690 Major Facilitator Superfamily HB368_01160 PF03466 LysR substrate binding domain HB368_01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_01210 PF13737 Transposase DDE domain HB368_01215 PF00248 Aldo/keto reductase family HB368_01235 PF00005 ABC transporter HB368_01245 PF12833 Helix-turn-helix domain HB368_01255 PF02705 K+ potassium transporter HB368_01280 PF00230 Major intrinsic protein HB368_01295 PF00977 Histidine biosynthesis protein HB368_01300 PF01636 Phosphotransferase enzyme family HB368_01315 PF03992 Antibiotic biosynthesis monooxygenase HB368_01330 PF00664 ABC transporter transmembrane region HB368_01330 PF00005 ABC transporter HB368_01335 PF00977 Histidine biosynthesis protein HB368_01350 PF00117 Glutamine amidotransferase class-I HB368_01355 PF00475 Imidazoleglycerol-phosphate dehydratase HB368_01375 PF00583 Acetyltransferase (GNAT) family HB368_01380 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HB368_01380 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HB368_01390 PF00512 His Kinase A (phospho-acceptor) domain HB368_01390 PF00672 HAMP domain HB368_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_01395 PF00072 Response regulator receiver domain HB368_01395 PF00486 Transcriptional regulatory protein, C terminal HB368_01400 PF17674 HHH domain HB368_01400 PF16921 Tex protein YqgF-like domain HB368_01400 PF09371 Tex-like protein N-terminal domain HB368_01400 PF00575 S1 RNA binding domain HB368_01405 PF00916 Sulfate permease family HB368_01405 PF01740 STAS domain HB368_01410 PF00106 short chain dehydrogenase HB368_01415 PF01053 Cys/Met metabolism PLP-dependent enzyme HB368_01420 PF12848 ABC transporter HB368_01420 PF00005 ABC transporter HB368_01445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_01445 PF00529 HlyD membrane-fusion protein of T1SS HB368_01450 PF00873 AcrB/AcrD/AcrF family HB368_01455 PF01545 Cation efflux family HB368_01485 PF00324 Amino acid permease HB368_01500 PF00749 tRNA synthetases class I (E and Q), catalytic domain HB368_01515 PF01795 MraW methylase family HB368_01525 PF00905 Penicillin binding protein transpeptidase domain HB368_01525 PF03717 Penicillin-binding Protein dimerisation domain HB368_01530 PF08245 Mur ligase middle domain HB368_01530 PF01225 Mur ligase family, catalytic domain HB368_01530 PF02875 Mur ligase family, glutamate ligase domain HB368_01535 PF01225 Mur ligase family, catalytic domain HB368_01535 PF08245 Mur ligase middle domain HB368_01535 PF02875 Mur ligase family, glutamate ligase domain HB368_01540 PF00953 Glycosyl transferase family 4 HB368_01550 PF13847 Methyltransferase domain HB368_01555 PF00905 Penicillin binding protein transpeptidase domain HB368_01555 PF00912 Transglycosylase HB368_01555 PF17092 Penicillin-binding protein OB-like domain HB368_01580 PF07660 Secretin and TonB N terminus short domain HB368_01580 PF03958 Bacterial type II/III secretion system short domain HB368_01580 PF00263 Bacterial type II and III secretion system protein HB368_01580 PF11741 AMIN domain HB368_01585 PF01202 Shikimate kinase HB368_01590 PF01761 3-dehydroquinate synthase HB368_01600 PF01493 GXGXG motif HB368_01600 PF01645 Conserved region in glutamate synthase HB368_01600 PF04898 Glutamate synthase central domain HB368_01600 PF00310 Glutamine amidotransferases class-II HB368_01605 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HB368_01605 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_01615 PF04011 LemA family HB368_01620 PF04536 TPM domain HB368_01630 PF00114 Pilin (bacterial filament) HB368_01630 PF07963 Prokaryotic N-terminal methylation motif HB368_01640 PF11846 Virulence factor membrane-bound polymerase, C-terminal HB368_01640 PF15864 Protein glycosylation ligase HB368_01640 PF04932 O-Antigen ligase HB368_01645 PF00210 Ferritin-like domain HB368_01650 PF04324 BFD-like [2Fe-2S] binding domain HB368_01655 PF01042 Endoribonuclease L-PSP HB368_01660 PF02824 TGS domain HB368_01660 PF13291 ACT domain HB368_01660 PF04607 Region found in RelA / SpoT proteins HB368_01670 PF01192 RNA polymerase Rpb6 HB368_01675 PF00625 Guanylate kinase HB368_01680 PF02401 LytB protein HB368_01720 PF00886 Ribosomal protein S16 HB368_01725 PF05239 PRC-barrel domain HB368_01725 PF01782 RimM N-terminal domain HB368_01730 PF01746 tRNA (Guanine-1)-methyltransferase HB368_01735 PF01245 Ribosomal protein L19 HB368_01740 PF00561 alpha/beta hydrolase fold HB368_01745 PF03280 Proteobacterial lipase chaperone protein HB368_01750 PF16198 tRNA pseudouridylate synthase B C-terminal domain HB368_01750 PF09157 Pseudouridine synthase II TruB, C-terminal HB368_01750 PF01509 TruB family pseudouridylate synthase (N terminal domain) HB368_01755 PF01925 Sulfite exporter TauE/SafE HB368_01765 PF00892 EamA-like transporter family HB368_01770 PF00892 EamA-like transporter family HB368_01775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB368_01775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB368_01780 PF01565 FAD binding domain HB368_01780 PF02913 FAD linked oxidases, C-terminal domain HB368_01790 PF03992 Antibiotic biosynthesis monooxygenase HB368_01795 PF02525 Flavodoxin-like fold HB368_01805 PF07690 Major Facilitator Superfamily HB368_01810 PF12805 FUSC-like inner membrane protein yccS HB368_01815 PF00080 Copper/zinc superoxide dismutase (SODC) HB368_01820 PF01594 AI-2E family transporter HB368_01825 PF13614 AAA domain HB368_01845 PF08241 Methyltransferase domain HB368_01855 PF00324 Amino acid permease HB368_01860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HB368_01860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HB368_01865 PF00202 Aminotransferase class-III HB368_01870 PF04958 Arginine N-succinyltransferase beta subunit HB368_01875 PF00171 Aldehyde dehydrogenase family HB368_01880 PF04996 Succinylarginine dihydrolase HB368_01885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HB368_01900 PF05922 Peptidase inhibitor I9 HB368_01900 PF00082 Subtilase family HB368_01915 PF03466 LysR substrate binding domain HB368_01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_01920 PF00892 EamA-like transporter family HB368_01935 PF13737 Transposase DDE domain HB368_01945 PF02092 Glycyl-tRNA synthetase beta subunit HB368_01945 PF05746 DALR anticodon binding domain HB368_01950 PF02091 Glycyl-tRNA synthetase alpha subunit HB368_01975 PF00571 CBS domain HB368_01980 PF04024 PspC domain HB368_01990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_01990 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_01990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_01990 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB368_02000 PF08501 Shikimate dehydrogenase substrate binding domain HB368_02000 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HB368_02000 PF01488 Shikimate / quinate 5-dehydrogenase HB368_02005 PF01218 Coproporphyrinogen III oxidase HB368_02010 PF00925 GTP cyclohydrolase II HB368_02015 PF02779 Transketolase, pyrimidine binding domain HB368_02015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HB368_02015 PF02780 Transketolase, C-terminal domain HB368_02020 PF00459 Inositol monophosphatase family HB368_02025 PF00271 Helicase conserved C-terminal domain HB368_02025 PF12343 Cold shock protein DEAD box A HB368_02025 PF00270 DEAD/DEAH box helicase HB368_02025 PF03880 DbpA RNA binding domain HB368_02035 PF00005 ABC transporter HB368_02040 PF02405 Permease MlaE HB368_02050 PF05494 MlaC protein HB368_02060 PF01544 CorA-like Mg2+ transporter protein HB368_02065 PF03641 Possible lysine decarboxylase HB368_02070 PF00293 NUDIX domain HB368_02075 PF00156 Phosphoribosyl transferase domain HB368_02080 PF00270 DEAD/DEAH box helicase HB368_02080 PF00271 Helicase conserved C-terminal domain HB368_02080 PF17191 RecG wedge domain HB368_02095 PF01553 Acyltransferase HB368_02105 PF00375 Sodium:dicarboxylate symporter family HB368_02115 PF01926 50S ribosome-binding GTPase HB368_02120 PF02082 Transcriptional regulator HB368_02125 PF00042 Globin HB368_02125 PF00970 Oxidoreductase FAD-binding domain HB368_02125 PF00175 Oxidoreductase NAD-binding domain HB368_02130 PF05872 Bacterial protein of unknown function (DUF853) HB368_02135 PF01053 Cys/Met metabolism PLP-dependent enzyme HB368_02140 PF00117 Glutamine amidotransferase class-I HB368_02145 PF00338 Ribosomal protein S10p/S20e HB368_02150 PF00297 Ribosomal protein L3 HB368_02155 PF00573 Ribosomal protein L4/L1 family HB368_02160 PF00276 Ribosomal protein L23 HB368_02165 PF03947 Ribosomal Proteins L2, C-terminal domain HB368_02165 PF00181 Ribosomal Proteins L2, RNA binding domain HB368_02170 PF00203 Ribosomal protein S19 HB368_02175 PF00237 Ribosomal protein L22p/L17e HB368_02180 PF07650 KH domain HB368_02180 PF00189 Ribosomal protein S3, C-terminal domain HB368_02185 PF00252 Ribosomal protein L16p/L10e HB368_02190 PF00831 Ribosomal L29 protein HB368_02195 PF00366 Ribosomal protein S17 HB368_02200 PF00238 Ribosomal protein L14p/L23e HB368_02205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HB368_02205 PF00467 KOW motif HB368_02210 PF00673 ribosomal L5P family C-terminus HB368_02210 PF00281 Ribosomal protein L5 HB368_02215 PF00253 Ribosomal protein S14p/S29e HB368_02220 PF00410 Ribosomal protein S8 HB368_02225 PF00347 Ribosomal protein L6 HB368_02230 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HB368_02235 PF00333 Ribosomal protein S5, N-terminal domain HB368_02235 PF03719 Ribosomal protein S5, C-terminal domain HB368_02240 PF00327 Ribosomal protein L30p/L7e HB368_02245 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HB368_02250 PF00344 SecY translocase HB368_02255 PF00444 Ribosomal protein L36 HB368_02260 PF00416 Ribosomal protein S13/S18 HB368_02265 PF00411 Ribosomal protein S11 HB368_02270 PF01479 S4 domain HB368_02270 PF00163 Ribosomal protein S4/S9 N-terminal domain HB368_02275 PF01000 RNA polymerase Rpb3/RpoA insert domain HB368_02275 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HB368_02275 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HB368_02280 PF01196 Ribosomal protein L17 HB368_02285 PF00743 Flavin-binding monooxygenase-like HB368_02290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_02290 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_02295 PF03937 Flavinator of succinate dehydrogenase HB368_02325 PF09526 Probable metal-binding protein (DUF2387) HB368_02330 PF01432 Peptidase family M3 HB368_02335 PF08461 Ribonuclease R winged-helix domain HB368_02335 PF00773 RNB domain HB368_02335 PF00575 S1 RNA binding domain HB368_02335 PF17876 Cold shock domain HB368_02335 PF08206 Ribonuclease B OB domain HB368_02380 PF01557 Fumarylacetoacetate (FAA) hydrolase family HB368_02385 PF12833 Helix-turn-helix domain HB368_02390 PF00892 EamA-like transporter family HB368_02395 PF03631 Virulence factor BrkB HB368_02400 PF03358 NADPH-dependent FMN reductase HB368_02425 PF02130 Uncharacterized protein family UPF0054 HB368_02430 PF02562 PhoH-like protein HB368_02435 PF01938 TRAM domain HB368_02435 PF04055 Radical SAM superfamily HB368_02435 PF00919 Uncharacterized protein family UPF0004 HB368_02440 PF10145 Phage-related minor tail protein HB368_02440 PF01464 Transglycosylase SLT domain HB368_02440 PF01551 Peptidase family M23 HB368_02450 PF00056 lactate/malate dehydrogenase, NAD binding domain HB368_02450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HB368_02470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HB368_02475 PF01066 CDP-alcohol phosphatidyltransferase HB368_02520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_02520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_02520 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_02530 PF00364 Biotin-requiring enzyme HB368_02530 PF00289 Biotin carboxylase, N-terminal domain HB368_02530 PF02785 Biotin carboxylase C-terminal domain HB368_02530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB368_02540 PF04386 Stringent starvation protein B HB368_02545 PF13417 Glutathione S-transferase, N-terminal domain HB368_02545 PF00043 Glutathione S-transferase, C-terminal domain HB368_02550 PF00380 Ribosomal protein S9/S16 HB368_02555 PF00572 Ribosomal protein L13 HB368_02560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HB368_02565 PF00398 Ribosomal RNA adenine dimethylase HB368_02570 PF00149 Calcineurin-like phosphoesterase HB368_02590 PF01926 50S ribosome-binding GTPase HB368_02590 PF13167 GTP-binding GTPase N-terminal HB368_02590 PF16360 GTP-binding GTPase Middle Region HB368_02600 PF13091 PLD-like domain HB368_02605 PF10518 TAT (twin-arginine translocation) pathway signal sequence HB368_02605 PF00149 Calcineurin-like phosphoesterase HB368_02610 PF01389 OmpA-like transmembrane domain HB368_02610 PF00691 OmpA family HB368_02615 PF00990 Diguanylate cyclase, GGDEF domain HB368_02615 PF17152 Periplasmic sensor domain HB368_02650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB368_02650 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_02660 PF04273 Putative phosphatase (DUF442) HB368_02660 PF00753 Metallo-beta-lactamase superfamily HB368_02665 PF00561 alpha/beta hydrolase fold HB368_02670 PF00085 Thioredoxin HB368_02675 PF03061 Thioesterase superfamily HB368_02685 PF04461 Protein of unknown function (DUF520) HB368_02695 PF01266 FAD dependent oxidoreductase HB368_02695 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HB368_02705 PF03795 YCII-related domain HB368_02710 PF04279 Intracellular septation protein A HB368_02715 PF02811 PHP domain HB368_02720 PF01062 Bestrophin, RFP-TM, chloride channel HB368_02725 PF04002 RadC-like JAB domain HB368_02730 PF04127 DNA / pantothenate metabolism flavoprotein HB368_02730 PF02441 Flavoprotein HB368_02735 PF02355 Protein export membrane protein HB368_02735 PF07549 SecD/SecF GG Motif HB368_02740 PF02355 Protein export membrane protein HB368_02740 PF07549 SecD/SecF GG Motif HB368_02740 PF13721 SecD export protein N-terminal TM region HB368_02745 PF02699 Preprotein translocase subunit HB368_02750 PF01702 Queuine tRNA-ribosyltransferase HB368_02770 PF02547 Queuosine biosynthesis protein HB368_02780 PF00512 His Kinase A (phospho-acceptor) domain HB368_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_02780 PF07689 KaiB domain HB368_02785 PF08335 GlnD PII-uridylyltransferase HB368_02785 PF03710 Glutamate-ammonia ligase adenylyltransferase HB368_02790 PF01063 Amino-transferase class IV HB368_02805 PF01522 Polysaccharide deacetylase HB368_02810 PF00535 Glycosyl transferase family 2 HB368_02815 PF13439 Glycosyltransferase Family 4 HB368_02815 PF00534 Glycosyl transferases group 1 HB368_02830 PF02350 UDP-N-acetylglucosamine 2-epimerase HB368_02840 PF00665 Integrase core domain HB368_02840 PF13936 Helix-turn-helix domain HB368_02845 PF01636 Phosphotransferase enzyme family HB368_02850 PF00665 Integrase core domain HB368_02850 PF13936 Helix-turn-helix domain HB368_02860 PF01336 OB-fold nucleic acid binding domain HB368_02860 PF00152 tRNA synthetases class II (D, K and N) HB368_02860 PF02938 GAD domain HB368_02870 PF07715 TonB-dependent Receptor Plug Domain HB368_02870 PF00593 TonB dependent receptor HB368_02890 PF06146 Phosphate-starvation-inducible E HB368_02895 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB368_02895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_02895 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_02895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_02900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_02900 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_02900 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB368_02900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_02910 PF00512 His Kinase A (phospho-acceptor) domain HB368_02910 PF00672 HAMP domain HB368_02915 PF00486 Transcriptional regulatory protein, C terminal HB368_02915 PF00072 Response regulator receiver domain HB368_02920 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HB368_02935 PF03009 Glycerophosphoryl diester phosphodiesterase family HB368_02940 PF01923 Cobalamin adenosyltransferase HB368_02945 PF00593 TonB dependent receptor HB368_02945 PF07715 TonB-dependent Receptor Plug Domain HB368_02950 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HB368_02955 PF00291 Pyridoxal-phosphate dependent enzyme HB368_02980 PF00290 Tryptophan synthase alpha chain HB368_02985 PF01039 Carboxyl transferase domain HB368_02990 PF02875 Mur ligase family, glutamate ligase domain HB368_02990 PF08245 Mur ligase middle domain HB368_03005 PF00753 Metallo-beta-lactamase superfamily HB368_03010 PF10417 C-terminal domain of 1-Cys peroxiredoxin HB368_03010 PF00578 AhpC/TSA family HB368_03015 PF02810 SEC-C motif HB368_03015 PF07517 SecA DEAD-like domain HB368_03015 PF07516 SecA Wing and Scaffold domain HB368_03015 PF01043 SecA preprotein cross-linking domain HB368_03025 PF00083 Sugar (and other) transporter HB368_03025 PF07690 Major Facilitator Superfamily HB368_03030 PF03006 Haemolysin-III related HB368_03055 PF00378 Enoyl-CoA hydratase/isomerase HB368_03055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB368_03055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB368_03060 PF02803 Thiolase, C-terminal domain HB368_03060 PF00108 Thiolase, N-terminal domain HB368_03065 PF12833 Helix-turn-helix domain HB368_03065 PF02311 AraC-like ligand binding domain HB368_03070 PF02515 CoA-transferase family III HB368_03075 PF04966 Carbohydrate-selective porin, OprB family HB368_03080 PF01011 PQQ enzyme repeat HB368_03085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HB368_03085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HB368_03095 PF00893 Small Multidrug Resistance protein HB368_03105 PF02803 Thiolase, C-terminal domain HB368_03105 PF00108 Thiolase, N-terminal domain HB368_03115 PF13505 Outer membrane protein beta-barrel domain HB368_03115 PF00691 OmpA family HB368_03125 PF01139 tRNA-splicing ligase RtcB HB368_03130 PF00324 Amino acid permease HB368_03135 PF05175 Methyltransferase small domain HB368_03135 PF08468 Methyltransferase small domain N-terminal HB368_03140 PF00860 Permease family HB368_03150 PF01741 Large-conductance mechanosensitive channel, MscL HB368_03165 PF06827 Zinc finger found in FPG and IleRS HB368_03165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HB368_03165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HB368_03170 PF02245 Methylpurine-DNA glycosylase (MPG) HB368_03175 PF00593 TonB dependent receptor HB368_03175 PF07715 TonB-dependent Receptor Plug Domain HB368_03180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_03185 PF03547 Membrane transport protein HB368_03195 PF10411 Disulfide bond isomerase protein N-terminus HB368_03195 PF13098 Thioredoxin-like domain HB368_03200 PF01571 Aminomethyltransferase folate-binding domain HB368_03210 PF04343 Protein of unknown function, DUF488 HB368_03215 PF03831 PhnA domain HB368_03215 PF08274 PhnA Zinc-Ribbon HB368_03220 PF07411 Domain of unknown function (DUF1508) HB368_03225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HB368_03225 PF04073 Aminoacyl-tRNA editing domain HB368_03225 PF03129 Anticodon binding domain HB368_03235 PF13936 Helix-turn-helix domain HB368_03235 PF00665 Integrase core domain HB368_03255 PF00072 Response regulator receiver domain HB368_03260 PF00072 Response regulator receiver domain HB368_03265 PF01584 CheW-like domain HB368_03270 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HB368_03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HB368_03275 PF00072 Response regulator receiver domain HB368_03275 PF01627 Hpt domain HB368_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_03275 PF01584 CheW-like domain HB368_03285 PF07687 Peptidase dimerisation domain HB368_03285 PF01546 Peptidase family M20/M25/M40 HB368_03290 PF08085 Entericidin EcnA/B family HB368_03300 PF04304 Protein of unknown function (DUF454) HB368_03305 PF03734 L,D-transpeptidase catalytic domain HB368_03305 PF17969 L,D-transpeptidase C-terminal domain HB368_03345 PF00667 FAD binding domain HB368_03345 PF00175 Oxidoreductase NAD-binding domain HB368_03345 PF00258 Flavodoxin HB368_03355 PF12805 FUSC-like inner membrane protein yccS HB368_03360 PF07690 Major Facilitator Superfamily HB368_03365 PF00881 Nitroreductase family HB368_03380 PF01235 Sodium:alanine symporter family HB368_03385 PF01734 Patatin-like phospholipase HB368_03390 PF00291 Pyridoxal-phosphate dependent enzyme HB368_03390 PF13291 ACT domain HB368_03395 PF05992 SbmA/BacA-like family HB368_03400 PF05649 Peptidase family M13 HB368_03400 PF01431 Peptidase family M13 HB368_03425 PF02637 GatB domain HB368_03425 PF02934 GatB/GatE catalytic domain HB368_03430 PF01425 Amidase HB368_03435 PF02686 Glu-tRNAGln amidotransferase C subunit HB368_03445 PF04085 rod shape-determining protein MreC HB368_03450 PF04093 rod shape-determining protein MreD HB368_03455 PF02545 Maf-like protein HB368_03460 PF00575 S1 RNA binding domain HB368_03460 PF10150 Ribonuclease E/G family HB368_03470 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HB368_03470 PF06974 Protein of unknown function (DUF1298) HB368_03475 PF01507 Phosphoadenosine phosphosulfate reductase family HB368_03490 PF02525 Flavodoxin-like fold HB368_03510 PF02673 Bacitracin resistance protein BacA HB368_03515 PF06719 AraC-type transcriptional regulator N-terminus HB368_03515 PF12833 Helix-turn-helix domain HB368_03520 PF08240 Alcohol dehydrogenase GroES-like domain HB368_03520 PF00550 Phosphopantetheine attachment site HB368_03520 PF09277 Erythronolide synthase, docking HB368_03520 PF00109 Beta-ketoacyl synthase, N-terminal domain HB368_03520 PF02801 Beta-ketoacyl synthase, C-terminal domain HB368_03520 PF08659 KR domain HB368_03520 PF00698 Acyl transferase domain HB368_03520 PF14765 Polyketide synthase dehydratase HB368_03520 PF08990 Erythronolide synthase docking HB368_03520 PF16197 Ketoacyl-synthetase C-terminal extension HB368_03525 PF01965 DJ-1/PfpI family HB368_03560 PF00324 Amino acid permease HB368_03565 PF04303 PrpF protein HB368_03570 PF00348 Polyprenyl synthetase HB368_03575 PF04237 YjbR HB368_03580 PF01145 SPFH domain / Band 7 family HB368_03590 PF01734 Patatin-like phospholipase HB368_03610 PF00884 Sulfatase HB368_03610 PF08019 Phosphoethanolamine transferase EptA/EptB HB368_03615 PF00072 Response regulator receiver domain HB368_03615 PF00486 Transcriptional regulatory protein, C terminal HB368_03620 PF08521 Two-component sensor kinase N-terminal HB368_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_03620 PF00512 His Kinase A (phospho-acceptor) domain HB368_03630 PF00909 Ammonium Transporter Family HB368_03635 PF03466 LysR substrate binding domain HB368_03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_03650 PF13649 Methyltransferase domain HB368_03655 PF08264 Anticodon-binding domain of tRNA HB368_03655 PF10458 Valyl tRNA synthetase tRNA binding arm HB368_03655 PF00133 tRNA synthetases class I (I, L, M and V) HB368_03675 PF01906 Putative heavy-metal-binding HB368_03680 PF01906 Putative heavy-metal-binding HB368_03685 PF02321 Outer membrane efflux protein HB368_03690 PF00873 AcrB/AcrD/AcrF family HB368_03695 PF00529 HlyD membrane-fusion protein of T1SS HB368_03695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_03700 PF01569 PAP2 superfamily HB368_03710 PF00348 Polyprenyl synthetase HB368_03720 PF00829 Ribosomal prokaryotic L21 protein HB368_03725 PF01016 Ribosomal L27 protein HB368_03730 PF03548 Outer membrane lipoprotein carrier protein LolA HB368_03740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HB368_03740 PF02403 Seryl-tRNA synthetase N-terminal domain HB368_03745 PF10414 Sirohaem synthase dimerisation region HB368_03745 PF14824 Sirohaem biosynthesis protein central HB368_03745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HB368_03750 PF00588 SpoU rRNA Methylase family HB368_03760 PF03358 NADPH-dependent FMN reductase HB368_03765 PF13520 Amino acid permease HB368_03770 PF00465 Iron-containing alcohol dehydrogenase HB368_03780 PF03099 Biotin/lipoate A/B protein ligase family HB368_03785 PF04359 Protein of unknown function (DUF493) HB368_03790 PF04546 Sigma-70, non-essential region HB368_03790 PF03979 Sigma-70 factor, region 1.1 HB368_03790 PF04545 Sigma-70, region 4 HB368_03790 PF04539 Sigma-70 region 3 HB368_03790 PF04542 Sigma-70 region 2 HB368_03790 PF00140 Sigma-70 factor, region 1.2 HB368_03815 PF00285 Citrate synthase, C-terminal domain HB368_03820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HB368_03825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HB368_03830 PF00890 FAD binding domain HB368_03830 PF02910 Fumarate reductase flavoprotein C-term HB368_03835 PF13085 2Fe-2S iron-sulfur cluster binding domain HB368_03850 PF16078 2-oxoglutarate dehydrogenase N-terminus HB368_03850 PF00676 Dehydrogenase E1 component HB368_03850 PF02779 Transketolase, pyrimidine binding domain HB368_03850 PF16870 2-oxoglutarate dehydrogenase C-terminal HB368_03855 PF02817 e3 binding domain HB368_03855 PF00364 Biotin-requiring enzyme HB368_03855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HB368_03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_03860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB368_03865 PF00549 CoA-ligase HB368_03865 PF08442 ATP-grasp domain HB368_03870 PF00549 CoA-ligase HB368_03870 PF02629 CoA binding domain HB368_03875 PF00579 tRNA synthetases class I (W and Y) HB368_03880 PF05661 Protein of unknown function (DUF808) HB368_03885 PF04228 Putative neutral zinc metallopeptidase HB368_03890 PF00999 Sodium/hydrogen exchanger family HB368_03905 PF09587 Bacterial capsule synthesis protein PGA_cap HB368_03915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HB368_03920 PF00582 Universal stress protein family HB368_03925 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_03930 PF01042 Endoribonuclease L-PSP HB368_03935 PF00440 Bacterial regulatory proteins, tetR family HB368_03940 PF01272 Transcription elongation factor, GreA/GreB, C-term HB368_03940 PF03449 Transcription elongation factor, N-terminal HB368_03945 PF02142 MGS-like domain HB368_03945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HB368_03945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB368_03950 PF00117 Glutamine amidotransferase class-I HB368_03950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HB368_03965 PF01985 CRS1 / YhbY (CRM) domain HB368_03970 PF01728 FtsJ-like methyltransferase HB368_03975 PF01434 Peptidase family M41 HB368_03975 PF06480 FtsH Extracellular HB368_03975 PF17862 AAA+ lid domain HB368_03975 PF00004 ATPase family associated with various cellular activities (AAA) HB368_03980 PF00809 Pterin binding enzyme HB368_04000 PF09423 PhoD-like phosphatase HB368_04000 PF16655 PhoD-like phosphatase, N-terminal domain HB368_04015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HB368_04015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HB368_04030 PF00083 Sugar (and other) transporter HB368_04035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HB368_04035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HB368_04040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HB368_04040 PF01266 FAD dependent oxidoreductase HB368_04045 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HB368_04045 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HB368_04050 PF00781 Diacylglycerol kinase catalytic domain HB368_04055 PF00149 Calcineurin-like phosphoesterase HB368_04060 PF00166 Chaperonin 10 Kd subunit HB368_04065 PF00118 TCP-1/cpn60 chaperonin family HB368_04070 PF01219 Prokaryotic diacylglycerol kinase HB368_04080 PF03009 Glycerophosphoryl diester phosphodiesterase family HB368_04085 PF00873 AcrB/AcrD/AcrF family HB368_04095 PF01435 Peptidase family M48 HB368_04100 PF01464 Transglycosylase SLT domain HB368_04105 PF01171 PP-loop family HB368_04115 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB368_04115 PF01464 Transglycosylase SLT domain HB368_04120 PF03449 Transcription elongation factor, N-terminal HB368_04120 PF01272 Transcription elongation factor, GreA/GreB, C-term HB368_04130 PF14659 Phage integrase, N-terminal SAM-like domain HB368_04130 PF00589 Phage integrase family HB368_04160 PF00672 HAMP domain HB368_04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_04160 PF00512 His Kinase A (phospho-acceptor) domain HB368_04165 PF00486 Transcriptional regulatory protein, C terminal HB368_04165 PF00072 Response regulator receiver domain HB368_04175 PF00394 Multicopper oxidase HB368_04175 PF07732 Multicopper oxidase HB368_04175 PF07731 Multicopper oxidase HB368_04200 PF00668 Condensation domain HB368_04200 PF00550 Phosphopantetheine attachment site HB368_04200 PF00501 AMP-binding enzyme HB368_04200 PF00975 Thioesterase domain HB368_04200 PF13193 AMP-binding enzyme C-terminal domain HB368_04215 PF00881 Nitroreductase family HB368_04230 PF02595 Glycerate kinase family HB368_04235 PF00384 Molybdopterin oxidoreductase HB368_04240 PF02634 FdhD/NarQ family HB368_04245 PF06803 Protein of unknown function (DUF1232) HB368_04250 PF11890 Domain of unknown function (DUF3410) HB368_04250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB368_04250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB368_04255 PF00152 tRNA synthetases class II (D, K and N) HB368_04265 PF18073 Rubredoxin metal binding domain HB368_04275 PF01235 Sodium:alanine symporter family HB368_04280 PF00324 Amino acid permease HB368_04290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HB368_04290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HB368_04295 PF01678 Diaminopimelate epimerase HB368_04300 PF00561 alpha/beta hydrolase fold HB368_04305 PF01810 LysE type translocator HB368_04310 PF02899 Phage integrase, N-terminal SAM-like domain HB368_04310 PF00589 Phage integrase family HB368_04315 PF01012 Electron transfer flavoprotein domain HB368_04320 PF00766 Electron transfer flavoprotein FAD-binding domain HB368_04320 PF01012 Electron transfer flavoprotein domain HB368_04325 PF03989 DNA gyrase C-terminal domain, beta-propeller HB368_04325 PF00521 DNA gyrase/topoisomerase IV, subunit A HB368_04340 PF00535 Glycosyl transferase family 2 HB368_04360 PF13533 Biotin-lipoyl like HB368_04370 PF00266 Aminotransferase class-V HB368_04385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HB368_04395 PF02687 FtsX-like permease family HB368_04395 PF12704 MacB-like periplasmic core domain HB368_04400 PF00005 ABC transporter HB368_04405 PF13567 Domain of unknown function (DUF4131) HB368_04405 PF00753 Metallo-beta-lactamase superfamily HB368_04405 PF03772 Competence protein HB368_04415 PF06965 Na+/H+ antiporter 1 HB368_04415 PF01343 Peptidase family S49 HB368_04420 PF12697 Alpha/beta hydrolase family HB368_04425 PF00551 Formyl transferase HB368_04430 PF00586 AIR synthase related protein, N-terminal domain HB368_04430 PF02769 AIR synthase related protein, C-terminal domain HB368_04435 PF01594 AI-2E family transporter HB368_04440 PF00308 Bacterial dnaA protein HB368_04440 PF11638 DnaA N-terminal domain HB368_04440 PF08299 Bacterial dnaA protein helix-turn-helix HB368_04470 PF00588 SpoU rRNA Methylase family HB368_04470 PF08032 RNA 2'-O ribose methyltransferase substrate binding HB368_04475 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HB368_04485 PF00691 OmpA family HB368_04490 PF07676 WD40-like Beta Propeller Repeat HB368_04490 PF04052 TolB amino-terminal domain HB368_04500 PF02472 Biopolymer transport protein ExbD/TolR HB368_04505 PF01618 MotA/TolQ/ExbB proton channel family HB368_04510 PF03061 Thioesterase superfamily HB368_04515 PF07687 Peptidase dimerisation domain HB368_04515 PF01546 Peptidase family M20/M25/M40 HB368_04520 PF05491 RuvB C-terminal winged helix domain HB368_04520 PF05496 Holliday junction DNA helicase RuvB P-loop domain HB368_04520 PF17864 RuvB AAA lid domain HB368_04525 PF01330 RuvA N terminal domain HB368_04525 PF07499 RuvA, C-terminal domain HB368_04530 PF01966 HD domain HB368_04535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HB368_04535 PF02769 AIR synthase related protein, C-terminal domain HB368_04535 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HB368_04540 PF07690 Major Facilitator Superfamily HB368_04545 PF01784 NIF3 (NGG1p interacting factor 3) HB368_04550 PF00378 Enoyl-CoA hydratase/isomerase HB368_04555 PF01467 Cytidylyltransferase-like HB368_04555 PF00293 NUDIX domain HB368_04565 PF00578 AhpC/TSA family HB368_04580 PF06508 Queuosine biosynthesis protein QueC HB368_04590 PF14602 Hexapeptide repeat of succinyl-transferase HB368_04590 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_04590 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HB368_04600 PF03466 LysR substrate binding domain HB368_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_04605 PF00005 ABC transporter HB368_04605 PF12857 TOBE-like domain HB368_04610 PF00528 Binding-protein-dependent transport system inner membrane component HB368_04615 PF00528 Binding-protein-dependent transport system inner membrane component HB368_04630 PF01063 Amino-transferase class IV HB368_04635 PF02618 YceG-like family HB368_04640 PF02223 Thymidylate kinase HB368_04650 PF00890 FAD binding domain HB368_04650 PF02910 Fumarate reductase flavoprotein C-term HB368_04655 PF13180 PDZ domain HB368_04665 PF06421 GTP-binding protein LepA C-terminus HB368_04665 PF03144 Elongation factor Tu domain 2 HB368_04665 PF00009 Elongation factor Tu GTP binding domain HB368_04665 PF00679 Elongation factor G C-terminus HB368_04670 PF10502 Signal peptidase, peptidase S26 HB368_04680 PF14622 Ribonuclease-III-like HB368_04680 PF00035 Double-stranded RNA binding motif HB368_04685 PF07650 KH domain HB368_04685 PF01926 50S ribosome-binding GTPase HB368_04695 PF02565 Recombination protein O C terminal HB368_04695 PF11967 Recombination protein O N terminal HB368_04700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HB368_04705 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HB368_04710 PF00106 short chain dehydrogenase HB368_04740 PF00012 Hsp70 protein HB368_04750 PF00155 Aminotransferase class I and II HB368_04760 PF00990 Diguanylate cyclase, GGDEF domain HB368_04760 PF17151 Periplasmic sensor domain HB368_04770 PF17757 UvrB interaction domain HB368_04770 PF02151 UvrB/uvrC motif HB368_04770 PF04851 Type III restriction enzyme, res subunit HB368_04770 PF00271 Helicase conserved C-terminal domain HB368_04770 PF12344 Ultra-violet resistance protein B HB368_04780 PF00892 EamA-like transporter family HB368_04785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HB368_04785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HB368_04800 PF01018 GTP1/OBG HB368_04800 PF01926 50S ribosome-binding GTPase HB368_04805 PF01472 PUA domain HB368_04805 PF00696 Amino acid kinase family HB368_04815 PF07759 Protein of unknown function (DUF1615) HB368_04820 PF01207 Dihydrouridine synthase (Dus) HB368_04825 PF03060 Nitronate monooxygenase HB368_04840 PF02350 UDP-N-acetylglucosamine 2-epimerase HB368_04870 PF03441 FAD binding domain of DNA photolyase HB368_04870 PF00875 DNA photolyase HB368_04875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB368_04880 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_04885 PF07943 Penicillin-binding protein 5, C-terminal domain HB368_04885 PF00768 D-alanyl-D-alanine carboxypeptidase HB368_04895 PF03971 Monomeric isocitrate dehydrogenase HB368_04900 PF00849 RNA pseudouridylate synthase HB368_04905 PF00180 Isocitrate/isopropylmalate dehydrogenase HB368_04925 PF06779 Uncharacterised MFS-type transporter YbfB HB368_04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_04930 PF03466 LysR substrate binding domain HB368_04940 PF02567 Phenazine biosynthesis-like protein HB368_04945 PF00675 Insulinase (Peptidase family M16) HB368_04945 PF05193 Peptidase M16 inactive domain HB368_04970 PF02581 Thiamine monophosphate synthase HB368_04975 PF00202 Aminotransferase class-III HB368_04985 PF00849 RNA pseudouridylate synthase HB368_04990 PF13936 Helix-turn-helix domain HB368_04990 PF00665 Integrase core domain HB368_05000 PF18337 RapA N-terminal Tudor like domain HB368_05000 PF12137 RNA polymerase recycling family C-terminal HB368_05000 PF00176 SNF2 family N-terminal domain HB368_05000 PF18339 RapA N-terminal Tudor like domain 1 HB368_05000 PF00271 Helicase conserved C-terminal domain HB368_05010 PF00440 Bacterial regulatory proteins, tetR family HB368_05015 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_05015 PF00175 Oxidoreductase NAD-binding domain HB368_05015 PF00970 Oxidoreductase FAD-binding domain HB368_05020 PF00487 Fatty acid desaturase HB368_05030 PF17754 MftR C-terminal domain HB368_05030 PF00440 Bacterial regulatory proteins, tetR family HB368_05040 PF00202 Aminotransferase class-III HB368_05045 PF00282 Pyridoxal-dependent decarboxylase conserved domain HB368_05050 PF00171 Aldehyde dehydrogenase family HB368_05055 PF01037 Lrp/AsnC ligand binding domain HB368_05060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HB368_05060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HB368_05060 PF00205 Thiamine pyrophosphate enzyme, central domain HB368_05065 PF00324 Amino acid permease HB368_05070 PF12849 PBP superfamily domain HB368_05075 PF00528 Binding-protein-dependent transport system inner membrane component HB368_05080 PF00528 Binding-protein-dependent transport system inner membrane component HB368_05085 PF00005 ABC transporter HB368_05090 PF08496 Peptidase family S49 N-terminal HB368_05090 PF01343 Peptidase family S49 HB368_05105 PF08328 Adenylosuccinate lyase C-terminal HB368_05105 PF00206 Lyase HB368_05110 PF04356 Protein of unknown function (DUF489) HB368_05120 PF00293 NUDIX domain HB368_05120 PF13344 Haloacid dehalogenase-like hydrolase HB368_05125 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_05130 PF00768 D-alanyl-D-alanine carboxypeptidase HB368_05130 PF07943 Penicillin-binding protein 5, C-terminal domain HB368_05145 PF01975 Survival protein SurE HB368_05150 PF01551 Peptidase family M23 HB368_05150 PF01476 LysM domain HB368_05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_05155 PF03466 LysR substrate binding domain HB368_05160 PF05362 Lon protease (S16) C-terminal proteolytic domain HB368_05160 PF13654 AAA domain HB368_05165 PF07690 Major Facilitator Superfamily HB368_05170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB368_05175 PF13593 SBF-like CPA transporter family (DUF4137) HB368_05180 PF01197 Ribosomal protein L31 HB368_05185 PF12792 CSS motif domain associated with EAL HB368_05185 PF00563 EAL domain HB368_05195 PF04055 Radical SAM superfamily HB368_05200 PF08207 Elongation factor P (EF-P) KOW-like domain HB368_05200 PF09285 Elongation factor P, C-terminal HB368_05200 PF01132 Elongation factor P (EF-P) OB domain HB368_05205 PF13722 5TM C-terminal transporter carbon starvation CstA HB368_05205 PF02554 Carbon starvation protein CstA HB368_05210 PF04328 Selenoprotein, putative HB368_05235 PF13936 Helix-turn-helix domain HB368_05235 PF00665 Integrase core domain HB368_05255 PF17954 Quercetinase C-terminal cupin domain HB368_05255 PF02678 Pirin HB368_05260 PF00291 Pyridoxal-phosphate dependent enzyme HB368_05265 PF08348 YheO-like PAS domain HB368_05265 PF13309 HTH domain HB368_05275 PF00501 AMP-binding enzyme HB368_05275 PF13193 AMP-binding enzyme C-terminal domain HB368_05275 PF00668 Condensation domain HB368_05275 PF00550 Phosphopantetheine attachment site HB368_05280 PF00501 AMP-binding enzyme HB368_05280 PF13193 AMP-binding enzyme C-terminal domain HB368_05280 PF00668 Condensation domain HB368_05280 PF00550 Phosphopantetheine attachment site HB368_05280 PF00975 Thioesterase domain HB368_05285 PF01032 FecCD transport family HB368_05290 PF01032 FecCD transport family HB368_05295 PF00005 ABC transporter HB368_05300 PF01497 Periplasmic binding protein HB368_05305 PF00593 TonB dependent receptor HB368_05305 PF07715 TonB-dependent Receptor Plug Domain HB368_05310 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HB368_05315 PF00501 AMP-binding enzyme HB368_05315 PF00668 Condensation domain HB368_05315 PF00550 Phosphopantetheine attachment site HB368_05320 PF13193 AMP-binding enzyme C-terminal domain HB368_05320 PF00501 AMP-binding enzyme HB368_05325 PF00857 Isochorismatase family HB368_05325 PF00550 Phosphopantetheine attachment site HB368_05330 PF00282 Pyridoxal-dependent decarboxylase conserved domain HB368_05340 PF00664 ABC transporter transmembrane region HB368_05340 PF00005 ABC transporter HB368_05345 PF00664 ABC transporter transmembrane region HB368_05345 PF00005 ABC transporter HB368_05350 PF00975 Thioesterase domain HB368_05370 PF00425 chorismate binding enzyme HB368_05380 PF01208 Uroporphyrinogen decarboxylase (URO-D) HB368_05385 PF05675 Protein of unknown function (DUF817) HB368_05410 PF00144 Beta-lactamase HB368_05420 PF01799 [2Fe-2S] binding domain HB368_05420 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_05425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HB368_05425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HB368_05440 PF00218 Indole-3-glycerol phosphate synthase HB368_05445 PF00591 Glycosyl transferase family, a/b domain HB368_05445 PF02885 Glycosyl transferase family, helical bundle domain HB368_05450 PF00593 TonB dependent receptor HB368_05450 PF07715 TonB-dependent Receptor Plug Domain HB368_05455 PF01433 Peptidase family M1 domain HB368_05455 PF11838 ERAP1-like C-terminal domain HB368_05460 PF00117 Glutamine amidotransferase class-I HB368_05470 PF00854 POT family HB368_05475 PF03951 Glutamine synthetase, beta-Grasp domain HB368_05475 PF00120 Glutamine synthetase, catalytic domain HB368_05480 PF04345 Chorismate lyase HB368_05485 PF01040 UbiA prenyltransferase family HB368_05520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HB368_05520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HB368_05525 PF01784 NIF3 (NGG1p interacting factor 3) HB368_05530 PF13180 PDZ domain HB368_05535 PF01743 Poly A polymerase head domain HB368_05535 PF12627 Probable RNA and SrmB- binding site of polymerase A HB368_05540 PF03949 Malic enzyme, NAD binding domain HB368_05540 PF00390 Malic enzyme, N-terminal domain HB368_05540 PF01515 Phosphate acetyl/butaryl transferase HB368_05545 PF03707 Bacterial signalling protein N terminal repeat HB368_05545 PF00563 EAL domain HB368_05545 PF00990 Diguanylate cyclase, GGDEF domain HB368_05550 PF04452 RNA methyltransferase HB368_05555 PF02219 Methylenetetrahydrofolate reductase HB368_05560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HB368_05560 PF05221 S-adenosyl-L-homocysteine hydrolase HB368_05575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_05575 PF09317 Domain of unknown function (DUF1974) HB368_05575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_05580 PF04055 Radical SAM superfamily HB368_05585 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_05585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB368_05595 PF07690 Major Facilitator Superfamily HB368_05615 PF00557 Metallopeptidase family M24 HB368_05620 PF00318 Ribosomal protein S2 HB368_05625 PF00889 Elongation factor TS HB368_05635 PF12833 Helix-turn-helix domain HB368_05645 PF00665 Integrase core domain HB368_05645 PF13936 Helix-turn-helix domain HB368_05665 PF05036 Sporulation related domain HB368_05665 PF03330 Lytic transglycolase HB368_05670 PF13406 Transglycosylase SLT domain HB368_05675 PF01098 Cell cycle protein HB368_05685 PF14489 QueF-like protein HB368_05685 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HB368_05690 PF01061 ABC-2 type transporter HB368_05695 PF00005 ABC transporter HB368_05700 PF00589 Phage integrase family HB368_05705 PF10548 P22AR C-terminal domain HB368_05705 PF02498 BRO family, N-terminal domain HB368_05745 PF12684 PDDEXK-like domain of unknown function (DUF3799) HB368_05745 PF06630 Enterobacterial exodeoxyribonuclease VIII HB368_05765 PF12161 HsdM N-terminal domain HB368_05765 PF02384 N-6 DNA Methylase HB368_05800 PF00772 DnaB-like helicase N terminal domain HB368_05800 PF03796 DnaB-like helicase C terminal domain HB368_05805 PF00145 C-5 cytosine-specific DNA methylase HB368_06025 PF08346 AntA/AntB antirepressor HB368_06025 PF10548 P22AR C-terminal domain HB368_06080 PF00182 Chitinase class I HB368_06115 PF00464 Serine hydroxymethyltransferase HB368_06120 PF02321 Outer membrane efflux protein HB368_06125 PF00873 AcrB/AcrD/AcrF family HB368_06130 PF13533 Biotin-lipoyl like HB368_06135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_06135 PF03466 LysR substrate binding domain HB368_06140 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB368_06145 PF00528 Binding-protein-dependent transport system inner membrane component HB368_06150 PF00528 Binding-protein-dependent transport system inner membrane component HB368_06155 PF00005 ABC transporter HB368_06160 PF00893 Small Multidrug Resistance protein HB368_06165 PF12838 4Fe-4S dicluster domain HB368_06175 PF00392 Bacterial regulatory proteins, gntR family HB368_06175 PF00155 Aminotransferase class I and II HB368_06180 PF02567 Phenazine biosynthesis-like protein HB368_06185 PF00175 Oxidoreductase NAD-binding domain HB368_06185 PF00970 Oxidoreductase FAD-binding domain HB368_06190 PF01980 tRNA-methyltransferase O HB368_06190 PF18389 TrmO C-terminal domain HB368_06200 PF00437 Type II/IV secretion system protein HB368_06210 PF00486 Transcriptional regulatory protein, C terminal HB368_06210 PF00072 Response regulator receiver domain HB368_06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_06215 PF00512 His Kinase A (phospho-acceptor) domain HB368_06215 PF08521 Two-component sensor kinase N-terminal HB368_06225 PF00293 NUDIX domain HB368_06235 PF00912 Transglycosylase HB368_06235 PF00905 Penicillin binding protein transpeptidase domain HB368_06235 PF14814 Bifunctional transglycosylase second domain HB368_06240 PF01513 ATP-NAD kinase HB368_06245 PF07023 Protein of unknown function (DUF1315) HB368_06250 PF00591 Glycosyl transferase family, a/b domain HB368_06250 PF02885 Glycosyl transferase family, helical bundle domain HB368_06255 PF00375 Sodium:dicarboxylate symporter family HB368_06260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_06260 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_06260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_06270 PF00800 Prephenate dehydratase HB368_06270 PF01842 ACT domain HB368_06270 PF01817 Chorismate mutase type II HB368_06275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HB368_06285 PF01546 Peptidase family M20/M25/M40 HB368_06285 PF07687 Peptidase dimerisation domain HB368_06290 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HB368_06290 PF01137 RNA 3'-terminal phosphate cyclase HB368_06305 PF01139 tRNA-splicing ligase RtcB HB368_06310 PF00753 Metallo-beta-lactamase superfamily HB368_06315 PF00158 Sigma-54 interaction domain HB368_06315 PF06956 Regulator of RNA terminal phosphate cyclase HB368_06325 PF03883 Peroxide stress protein YaaA HB368_06335 PF05690 Thiazole biosynthesis protein ThiG HB368_06345 PF04241 Protein of unknown function (DUF423) HB368_06350 PF04542 Sigma-70 region 2 HB368_06350 PF04545 Sigma-70, region 4 HB368_06350 PF00140 Sigma-70 factor, region 1.2 HB368_06360 PF00313 'Cold-shock' DNA-binding domain HB368_06365 PF00271 Helicase conserved C-terminal domain HB368_06365 PF00270 DEAD/DEAH box helicase HB368_06375 PF00881 Nitroreductase family HB368_06380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HB368_06380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HB368_06505 PF01180 Dihydroorotate dehydrogenase HB368_06510 PF02674 Colicin V production protein HB368_06515 PF00156 Phosphoribosyl transferase domain HB368_06530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HB368_06530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HB368_06535 PF01435 Peptidase family M48 HB368_06540 PF09424 Yqey-like protein HB368_06545 PF01165 Ribosomal protein S21 HB368_06550 PF00814 Glycoprotease family HB368_06570 PF00069 Protein kinase domain HB368_06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_06595 PF03466 LysR substrate binding domain HB368_06600 PF00202 Aminotransferase class-III HB368_06605 PF00171 Aldehyde dehydrogenase family HB368_06610 PF00324 Amino acid permease HB368_06640 PF04076 Bacterial OB fold (BOF) protein HB368_06665 PF00561 alpha/beta hydrolase fold HB368_06670 PF03616 Sodium/glutamate symporter HB368_06680 PF00392 Bacterial regulatory proteins, gntR family HB368_06680 PF07729 FCD domain HB368_06685 PF00293 NUDIX domain HB368_06715 PF04403 Paraquat-inducible protein A HB368_06720 PF02470 MlaD protein HB368_06730 PF00576 HIUase/Transthyretin family HB368_06740 PF00072 Response regulator receiver domain HB368_06740 PF00486 Transcriptional regulatory protein, C terminal HB368_06745 PF00672 HAMP domain HB368_06745 PF00512 His Kinase A (phospho-acceptor) domain HB368_06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_06785 PF00512 His Kinase A (phospho-acceptor) domain HB368_06785 PF08521 Two-component sensor kinase N-terminal HB368_06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_06790 PF00486 Transcriptional regulatory protein, C terminal HB368_06790 PF00072 Response regulator receiver domain HB368_06810 PF01177 Asp/Glu/Hydantoin racemase HB368_06815 PF00892 EamA-like transporter family HB368_06820 PF07995 Glucose / Sorbosone dehydrogenase HB368_06840 PF00375 Sodium:dicarboxylate symporter family HB368_06850 PF00753 Metallo-beta-lactamase superfamily HB368_06850 PF16123 Hydroxyacylglutathione hydrolase C-terminus HB368_06855 PF00528 Binding-protein-dependent transport system inner membrane component HB368_06860 PF00005 ABC transporter HB368_06860 PF09383 NIL domain HB368_06865 PF03180 NLPA lipoprotein HB368_06870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HB368_06870 PF02844 Phosphoribosylglycinamide synthetase, N domain HB368_06870 PF02843 Phosphoribosylglycinamide synthetase, C domain HB368_06875 PF02142 MGS-like domain HB368_06875 PF01808 AICARFT/IMPCHase bienzyme HB368_06880 PF02954 Bacterial regulatory protein, Fis family HB368_06900 PF01134 Glucose inhibited division protein A HB368_06900 PF13932 GidA associated domain HB368_06910 PF14403 Circularly permuted ATP-grasp type 2 HB368_06920 PF08379 Bacterial transglutaminase-like N-terminal region HB368_06920 PF01841 Transglutaminase-like superfamily HB368_06930 PF01168 Alanine racemase, N-terminal domain HB368_06930 PF00842 Alanine racemase, C-terminal domain HB368_06935 PF00772 DnaB-like helicase N terminal domain HB368_06935 PF03796 DnaB-like helicase C terminal domain HB368_06940 PF03948 Ribosomal protein L9, C-terminal domain HB368_06940 PF01281 Ribosomal protein L9, N-terminal domain HB368_06945 PF01084 Ribosomal protein S18 HB368_06950 PF01250 Ribosomal protein S6 HB368_06955 PF01040 UbiA prenyltransferase family HB368_06960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HB368_06965 PF00510 Cytochrome c oxidase subunit III HB368_06970 PF00115 Cytochrome C and Quinol oxidase polypeptide I HB368_06975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HB368_06975 PF06481 COX Aromatic Rich Motif HB368_06985 PF02896 PEP-utilising enzyme, TIM barrel domain HB368_06985 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HB368_06985 PF00391 PEP-utilising enzyme, mobile domain HB368_06990 PF03618 Kinase/pyrophosphorylase HB368_07000 PF01522 Polysaccharide deacetylase HB368_07000 PF14883 Hypothetical glycosyl hydrolase family 13 HB368_07005 PF00535 Glycosyl transferase family 2 HB368_07010 PF13994 PgaD-like protein HB368_07020 PF00296 Luciferase-like monooxygenase HB368_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_07035 PF03466 LysR substrate binding domain HB368_07045 PF03462 PCRF domain HB368_07045 PF00472 RF-1 domain HB368_07050 PF17827 PrmC N-terminal domain HB368_07050 PF13847 Methyltransferase domain HB368_07055 PF12833 Helix-turn-helix domain HB368_07060 PF00106 short chain dehydrogenase HB368_07065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_07065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_07065 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_07070 PF13193 AMP-binding enzyme C-terminal domain HB368_07070 PF00501 AMP-binding enzyme HB368_07075 PF01613 Flavin reductase like domain HB368_07080 PF00899 ThiF family HB368_07085 PF03109 ABC1 family HB368_07100 PF03814 Potassium-transporting ATPase A subunit HB368_07110 PF02669 K+-transporting ATPase, c chain HB368_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_07115 PF02702 Osmosensitive K+ channel His kinase sensor domain HB368_07115 PF13493 Domain of unknown function (DUF4118) HB368_07115 PF00512 His Kinase A (phospho-acceptor) domain HB368_07120 PF00072 Response regulator receiver domain HB368_07120 PF00486 Transcriptional regulatory protein, C terminal HB368_07125 PF00120 Glutamine synthetase, catalytic domain HB368_07135 PF03232 Ubiquinone biosynthesis protein COQ7 HB368_07140 PF07690 Major Facilitator Superfamily HB368_07145 PF07244 Surface antigen variable number repeat HB368_07145 PF01103 Surface antigen HB368_07145 PF17243 POTRA domain TamA domain 1 HB368_07260 PF00330 Aconitase family (aconitate hydratase) HB368_07260 PF06434 Aconitate hydratase 2 N-terminus HB368_07260 PF11791 Aconitate B N-terminal domain HB368_07270 PF00027 Cyclic nucleotide-binding domain HB368_07270 PF00520 Ion transport protein HB368_07275 PF07690 Major Facilitator Superfamily HB368_07290 PF03466 LysR substrate binding domain HB368_07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_07295 PF04284 Protein of unknown function (DUF441) HB368_07305 PF00849 RNA pseudouridylate synthase HB368_07305 PF01479 S4 domain HB368_07320 PF01479 S4 domain HB368_07320 PF00849 RNA pseudouridylate synthase HB368_07325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HB368_07330 PF01119 DNA mismatch repair protein, C-terminal domain HB368_07330 PF08676 MutL C terminal dimerisation domain HB368_07340 PF17209 Hfq protein HB368_07350 PF00881 Nitroreductase family HB368_07360 PF00149 Calcineurin-like phosphoesterase HB368_07365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HB368_07370 PF00749 tRNA synthetases class I (E and Q), catalytic domain HB368_07370 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HB368_07375 PF00117 Glutamine amidotransferase class-I HB368_07375 PF00958 GMP synthase C terminal domain HB368_07375 PF02540 NAD synthase HB368_07380 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HB368_07385 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HB368_07390 PF13520 Amino acid permease HB368_07395 PF00171 Aldehyde dehydrogenase family HB368_07410 PF00465 Iron-containing alcohol dehydrogenase HB368_07415 PF05970 PIF1-like helicase HB368_07415 PF14493 Helix-turn-helix domain HB368_07425 PF02110 Hydroxyethylthiazole kinase family HB368_07440 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HB368_07440 PF01433 Peptidase family M1 domain HB368_07440 PF11940 Domain of unknown function (DUF3458) Ig-like fold HB368_07455 PF13954 PapC N-terminal domain HB368_07455 PF00577 Outer membrane usher protein HB368_07455 PF13953 PapC C-terminal domain HB368_07480 PF01817 Chorismate mutase type II HB368_07485 PF01037 Lrp/AsnC ligand binding domain HB368_07495 PF00440 Bacterial regulatory proteins, tetR family HB368_07500 PF00593 TonB dependent receptor HB368_07500 PF07715 TonB-dependent Receptor Plug Domain HB368_07505 PF00924 Mechanosensitive ion channel HB368_07535 PF00872 Transposase, Mutator family HB368_07545 PF07715 TonB-dependent Receptor Plug Domain HB368_07545 PF00593 TonB dependent receptor HB368_07565 PF16326 ABC transporter C-terminal domain HB368_07565 PF12848 ABC transporter HB368_07565 PF00005 ABC transporter HB368_07570 PF00582 Universal stress protein family HB368_07595 PF00689 Cation transporting ATPase, C-terminus HB368_07595 PF00690 Cation transporter/ATPase, N-terminus HB368_07600 PF02308 MgtC family HB368_07605 PF03594 Benzoate membrane transport protein HB368_07610 PF01037 Lrp/AsnC ligand binding domain HB368_07615 PF01810 LysE type translocator HB368_07620 PF00923 Transaldolase/Fructose-6-phosphate aldolase HB368_07625 PF03466 LysR substrate binding domain HB368_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_07635 PF00108 Thiolase, N-terminal domain HB368_07635 PF02803 Thiolase, C-terminal domain HB368_07645 PF01575 MaoC like domain HB368_07660 PF07690 Major Facilitator Superfamily HB368_07675 PF12170 DNA polymerase III tau subunit V interacting with alpha HB368_07675 PF12169 DNA polymerase III subunits gamma and tau domain III HB368_07675 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HB368_07680 PF05506 Domain of unknown function (DUF756) HB368_07680 PF04185 Phosphoesterase family HB368_07685 PF03061 Thioesterase superfamily HB368_07690 PF00465 Iron-containing alcohol dehydrogenase HB368_07700 PF01451 Low molecular weight phosphotyrosine protein phosphatase HB368_07705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HB368_07705 PF01565 FAD binding domain HB368_07730 PF01645 Conserved region in glutamate synthase HB368_07985 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HB368_08035 PF00182 Chitinase class I HB368_08045 PF00107 Zinc-binding dehydrogenase HB368_08045 PF13823 Alcohol dehydrogenase GroES-associated HB368_08045 PF08240 Alcohol dehydrogenase GroES-like domain HB368_08050 PF13340 Putative transposase of IS4/5 family (DUF4096) HB368_08055 PF13438 Domain of unknown function (DUF4113) HB368_08055 PF11799 impB/mucB/samB family C-terminal domain HB368_08055 PF00817 impB/mucB/samB family HB368_08060 PF00717 Peptidase S24-like HB368_08080 PF12832 MFS_1 like family HB368_08090 PF02785 Biotin carboxylase C-terminal domain HB368_08090 PF00289 Biotin carboxylase, N-terminal domain HB368_08090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB368_08095 PF00364 Biotin-requiring enzyme HB368_08100 PF01220 Dehydroquinase class II HB368_08105 PF11799 impB/mucB/samB family C-terminal domain HB368_08105 PF13438 Domain of unknown function (DUF4113) HB368_08105 PF00817 impB/mucB/samB family HB368_08115 PF00005 ABC transporter HB368_08120 PF00072 Response regulator receiver domain HB368_08120 PF00486 Transcriptional regulatory protein, C terminal HB368_08130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HB368_08130 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_08130 PF13806 Rieske-like [2Fe-2S] domain HB368_08130 PF18267 Rubredoxin NAD+ reductase C-terminal domain HB368_08130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HB368_08130 PF04324 BFD-like [2Fe-2S] binding domain HB368_08135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HB368_08135 PF18267 Rubredoxin NAD+ reductase C-terminal domain HB368_08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_08135 PF04324 BFD-like [2Fe-2S] binding domain HB368_08135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HB368_08140 PF01568 Molydopterin dinucleotide binding domain HB368_08140 PF00384 Molybdopterin oxidoreductase HB368_08140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HB368_08140 PF04324 BFD-like [2Fe-2S] binding domain HB368_08145 PF12804 MobA-like NTP transferase domain HB368_08155 PF06463 Molybdenum Cofactor Synthesis C HB368_08155 PF04055 Radical SAM superfamily HB368_08165 PF02391 MoaE protein HB368_08170 PF01967 MoaC family HB368_08170 PF00994 Probable molybdopterin binding domain HB368_08175 PF03454 MoeA C-terminal region (domain IV) HB368_08175 PF03453 MoeA N-terminal region (domain I and II) HB368_08175 PF00994 Probable molybdopterin binding domain HB368_08180 PF01638 HxlR-like helix-turn-helix HB368_08185 PF00155 Aminotransferase class I and II HB368_08185 PF00392 Bacterial regulatory proteins, gntR family HB368_08190 PF00892 EamA-like transporter family HB368_08210 PF02635 DsrE/DsrF-like family HB368_08215 PF16363 GDP-mannose 4,6 dehydratase HB368_08220 PF00206 Lyase HB368_08220 PF10415 Fumarase C C-terminus HB368_08240 PF01266 FAD dependent oxidoreductase HB368_08250 PF02542 YgbB family HB368_08260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HB368_08260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HB368_08265 PF00440 Bacterial regulatory proteins, tetR family HB368_08270 PF02954 Bacterial regulatory protein, Fis family HB368_08270 PF00072 Response regulator receiver domain HB368_08270 PF00158 Sigma-54 interaction domain HB368_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_08275 PF00989 PAS fold HB368_08275 PF00512 His Kinase A (phospho-acceptor) domain HB368_08285 PF00919 Uncharacterized protein family UPF0004 HB368_08285 PF04055 Radical SAM superfamily HB368_08285 PF18693 TRAM domain HB368_08290 PF00696 Amino acid kinase family HB368_08295 PF01765 Ribosome recycling factor HB368_08300 PF01255 Putative undecaprenyl diphosphate synthase HB368_08310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HB368_08310 PF13288 DXP reductoisomerase C-terminal domain HB368_08310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HB368_08315 PF02163 Peptidase family M50 HB368_08315 PF17820 PDZ domain HB368_08315 PF13180 PDZ domain HB368_08320 PF07244 Surface antigen variable number repeat HB368_08320 PF01103 Surface antigen HB368_08330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HB368_08330 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_08335 PF07977 FabA-like domain HB368_08340 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_08340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HB368_08355 PF02631 RecX family HB368_08360 PF00154 recA bacterial DNA recombination protein HB368_08365 PF01479 S4 domain HB368_08370 PF13419 Haloacid dehalogenase-like hydrolase HB368_08395 PF01037 Lrp/AsnC ligand binding domain HB368_08400 PF00266 Aminotransferase class-V HB368_08405 PF00324 Amino acid permease HB368_08415 PF05922 Peptidase inhibitor I9 HB368_08415 PF00082 Subtilase family HB368_08420 PF00916 Sulfate permease family HB368_08420 PF01740 STAS domain HB368_08425 PF02586 SOS response associated peptidase (SRAP) HB368_08430 PF07995 Glucose / Sorbosone dehydrogenase HB368_08440 PF03707 Bacterial signalling protein N terminal repeat HB368_08440 PF00563 EAL domain HB368_08440 PF00990 Diguanylate cyclase, GGDEF domain HB368_08455 PF02378 Phosphotransferase system, EIIC HB368_08455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HB368_08460 PF00294 pfkB family carbohydrate kinase HB368_08465 PF00391 PEP-utilising enzyme, mobile domain HB368_08465 PF05524 PEP-utilising enzyme, N-terminal HB368_08465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HB368_08465 PF02896 PEP-utilising enzyme, TIM barrel domain HB368_08465 PF00381 PTS HPr component phosphorylation site HB368_08490 PF05525 Branched-chain amino acid transport protein HB368_08495 PF00557 Metallopeptidase family M24 HB368_08500 PF03466 LysR substrate binding domain HB368_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_08510 PF00462 Glutaredoxin HB368_08515 PF00202 Aminotransferase class-III HB368_08520 PF00571 CBS domain HB368_08520 PF00478 IMP dehydrogenase / GMP reductase domain HB368_08545 PF02881 SRP54-type protein, helical bundle domain HB368_08545 PF00448 SRP54-type protein, GTPase domain HB368_08555 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HB368_08570 PF08173 Membrane bound YbgT-like protein HB368_08575 PF02322 Cytochrome bd terminal oxidase subunit II HB368_08580 PF01654 Cytochrome bd terminal oxidase subunit I HB368_08590 PF00665 Integrase core domain HB368_08590 PF13936 Helix-turn-helix domain HB368_08595 PF07290 Protein of unknown function (DUF1449) HB368_08605 PF00294 pfkB family carbohydrate kinase HB368_08610 PF00593 TonB dependent receptor HB368_08610 PF07715 TonB-dependent Receptor Plug Domain HB368_08615 PF08367 Peptidase M16C associated HB368_08615 PF00675 Insulinase (Peptidase family M16) HB368_08615 PF05193 Peptidase M16 inactive domain HB368_08620 PF02253 Phospholipase A1 HB368_08625 PF02386 Cation transport protein HB368_08630 PF02254 TrkA-N domain HB368_08630 PF02080 TrkA-C domain HB368_08635 PF00291 Pyridoxal-phosphate dependent enzyme HB368_08635 PF00585 C-terminal regulatory domain of Threonine dehydratase HB368_08640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HB368_08660 PF02774 Semialdehyde dehydrogenase, dimerisation domain HB368_08660 PF01118 Semialdehyde dehydrogenase, NAD binding domain HB368_08670 PF02617 ATP-dependent Clp protease adaptor protein ClpS HB368_08675 PF17871 AAA lid domain HB368_08675 PF02861 Clp amino terminal domain, pathogenicity island component HB368_08675 PF10431 C-terminal, D2-small domain, of ClpB protein HB368_08675 PF07724 AAA domain (Cdc48 subfamily) HB368_08675 PF00004 ATPase family associated with various cellular activities (AAA) HB368_08680 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HB368_08685 PF00793 DAHP synthetase I family HB368_08700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_08700 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_08730 PF00117 Glutamine amidotransferase class-I HB368_08730 PF06418 CTP synthase N-terminus HB368_08735 PF00793 DAHP synthetase I family HB368_08740 PF03952 Enolase, N-terminal domain HB368_08740 PF00113 Enolase, C-terminal TIM barrel domain HB368_08745 PF04239 Protein of unknown function (DUF421) HB368_08750 PF04977 Septum formation initiator HB368_08755 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HB368_08760 PF01144 Coenzyme A transferase HB368_08765 PF01144 Coenzyme A transferase HB368_08770 PF02803 Thiolase, C-terminal domain HB368_08770 PF00108 Thiolase, N-terminal domain HB368_08775 PF00206 Lyase HB368_08775 PF10397 Adenylosuccinate lyase C-terminus HB368_08780 PF00561 alpha/beta hydrolase fold HB368_08785 PF07690 Major Facilitator Superfamily HB368_08790 PF02627 Carboxymuconolactone decarboxylase family HB368_08795 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HB368_08795 PF00775 Dioxygenase HB368_08800 PF00775 Dioxygenase HB368_08805 PF01487 Type I 3-dehydroquinase HB368_08810 PF05048 Periplasmic copper-binding protein (NosD) HB368_08815 PF04966 Carbohydrate-selective porin, OprB family HB368_08820 PF01011 PQQ enzyme repeat HB368_08820 PF13360 PQQ-like domain HB368_08830 PF04143 Sulphur transport HB368_08840 PF00753 Metallo-beta-lactamase superfamily HB368_08845 PF01614 Bacterial transcriptional regulator HB368_08845 PF09339 IclR helix-turn-helix domain HB368_08850 PF03466 LysR substrate binding domain HB368_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_08855 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_08855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_08855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_08870 PF00106 short chain dehydrogenase HB368_08880 PF07690 Major Facilitator Superfamily HB368_08890 PF01425 Amidase HB368_08895 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB368_08910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB368_08910 PF00355 Rieske [2Fe-2S] domain HB368_08925 PF00175 Oxidoreductase NAD-binding domain HB368_08925 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_08930 PF01613 Flavin reductase like domain HB368_08935 PF02311 AraC-like ligand binding domain HB368_08935 PF12833 Helix-turn-helix domain HB368_08940 PF02727 Copper amine oxidase, N2 domain HB368_08940 PF01179 Copper amine oxidase, enzyme domain HB368_08940 PF02728 Copper amine oxidase, N3 domain HB368_08940 PF07833 Copper amine oxidase N-terminal domain HB368_08950 PF00171 Aldehyde dehydrogenase family HB368_08955 PF01804 Penicillin amidase HB368_08960 PF12146 Serine aminopeptidase, S33 HB368_08965 PF02803 Thiolase, C-terminal domain HB368_08965 PF00108 Thiolase, N-terminal domain HB368_08970 PF01144 Coenzyme A transferase HB368_08975 PF01144 Coenzyme A transferase HB368_08980 PF04444 Catechol dioxygenase N terminus HB368_08980 PF00775 Dioxygenase HB368_08985 PF02426 Muconolactone delta-isomerase HB368_08990 PF13378 Enolase C-terminal domain-like HB368_08990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HB368_08995 PF03466 LysR substrate binding domain HB368_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09005 PF07729 FCD domain HB368_09005 PF00392 Bacterial regulatory proteins, gntR family HB368_09010 PF00920 Dehydratase family HB368_09015 PF07690 Major Facilitator Superfamily HB368_09025 PF00171 Aldehyde dehydrogenase family HB368_09035 PF00561 alpha/beta hydrolase fold HB368_09040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_09045 PF00106 short chain dehydrogenase HB368_09055 PF09278 MerR, DNA binding HB368_09055 PF00376 MerR family regulatory protein HB368_09065 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_09075 PF12706 Beta-lactamase superfamily domain HB368_09080 PF00440 Bacterial regulatory proteins, tetR family HB368_09080 PF08359 YsiA-like protein, C-terminal region HB368_09085 PF03466 LysR substrate binding domain HB368_09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09100 PF00106 short chain dehydrogenase HB368_09105 PF01575 MaoC like domain HB368_09110 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB368_09110 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_09110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_09110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_09120 PF00501 AMP-binding enzyme HB368_09120 PF13193 AMP-binding enzyme C-terminal domain HB368_09150 PF07690 Major Facilitator Superfamily HB368_09155 PF04909 Amidohydrolase HB368_09165 PF07702 UTRA domain HB368_09165 PF00392 Bacterial regulatory proteins, gntR family HB368_09170 PF08450 SMP-30/Gluconolactonase/LRE-like region HB368_09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09180 PF03466 LysR substrate binding domain HB368_09200 PF00746 LPXTG cell wall anchor motif HB368_09200 PF17961 Bacterial Ig domain HB368_09200 PF10425 C-terminus of bacterial fibrinogen-binding adhesin HB368_09200 PF04650 YSIRK type signal peptide HB368_09200 PF17210 SdrD B-like domain HB368_09205 PF00529 HlyD membrane-fusion protein of T1SS HB368_09205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_09220 PF00171 Aldehyde dehydrogenase family HB368_09225 PF00920 Dehydratase family HB368_09235 PF03466 LysR substrate binding domain HB368_09235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09240 PF01370 NAD dependent epimerase/dehydratase family HB368_09245 PF07690 Major Facilitator Superfamily HB368_09250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HB368_09250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HB368_09270 PF00005 ABC transporter HB368_09290 PF14572 Phosphoribosyl synthetase-associated domain HB368_09290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HB368_09295 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HB368_09310 PF13737 Transposase DDE domain HB368_09315 PF13533 Biotin-lipoyl like HB368_09320 PF07690 Major Facilitator Superfamily HB368_09345 PF01975 Survival protein SurE HB368_09355 PF13291 ACT domain HB368_09355 PF04607 Region found in RelA / SpoT proteins HB368_09355 PF02824 TGS domain HB368_09360 PF00271 Helicase conserved C-terminal domain HB368_09360 PF02151 UvrB/uvrC motif HB368_09360 PF12344 Ultra-violet resistance protein B HB368_09360 PF17757 UvrB interaction domain HB368_09360 PF04851 Type III restriction enzyme, res subunit HB368_09390 PF13673 Acetyltransferase (GNAT) domain HB368_09395 PF12146 Serine aminopeptidase, S33 HB368_09400 PF03466 LysR substrate binding domain HB368_09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09415 PF12146 Serine aminopeptidase, S33 HB368_09420 PF12833 Helix-turn-helix domain HB368_09420 PF02311 AraC-like ligand binding domain HB368_09430 PF00672 HAMP domain HB368_09430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_09430 PF00512 His Kinase A (phospho-acceptor) domain HB368_09430 PF16527 Two-component sensor protein CpxA, periplasmic domain HB368_09435 PF00486 Transcriptional regulatory protein, C terminal HB368_09435 PF00072 Response regulator receiver domain HB368_09440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_09440 PF00529 HlyD membrane-fusion protein of T1SS HB368_09445 PF00873 AcrB/AcrD/AcrF family HB368_09450 PF02321 Outer membrane efflux protein HB368_09455 PF12146 Serine aminopeptidase, S33 HB368_09460 PF00743 Flavin-binding monooxygenase-like HB368_09475 PF01266 FAD dependent oxidoreductase HB368_09495 PF16970 Type-1 fimbrial protein, A HB368_09500 PF02753 Pili assembly chaperone PapD, C-terminal domain HB368_09500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HB368_09505 PF13954 PapC N-terminal domain HB368_09505 PF13953 PapC C-terminal domain HB368_09505 PF00577 Outer membrane usher protein HB368_09520 PF00107 Zinc-binding dehydrogenase HB368_09520 PF08240 Alcohol dehydrogenase GroES-like domain HB368_09530 PF00199 Catalase HB368_09545 PF13091 PLD-like domain HB368_09565 PF01244 Membrane dipeptidase (Peptidase family M19) HB368_09570 PF04055 Radical SAM superfamily HB368_09570 PF13186 Iron-sulfur cluster-binding domain HB368_09575 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HB368_09580 PF03070 TENA/THI-4/PQQC family HB368_09585 PF12706 Beta-lactamase superfamily domain HB368_09590 PF08042 PqqA family HB368_09595 PF02503 Polyphosphate kinase middle domain HB368_09595 PF13090 Polyphosphate kinase C-terminal domain 2 HB368_09595 PF17941 Polyphosphate kinase C-terminal domain 1 HB368_09595 PF13089 Polyphosphate kinase N-terminal domain HB368_09600 PF00149 Calcineurin-like phosphoesterase HB368_09610 PF00857 Isochorismatase family HB368_09610 PF00550 Phosphopantetheine attachment site HB368_09615 PF00106 short chain dehydrogenase HB368_09620 PF00005 ABC transporter HB368_09620 PF03459 TOBE domain HB368_09625 PF00528 Binding-protein-dependent transport system inner membrane component HB368_09635 PF03459 TOBE domain HB368_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09640 PF00355 Rieske [2Fe-2S] domain HB368_09640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB368_09645 PF00866 Ring hydroxylating beta subunit HB368_09650 PF00970 Oxidoreductase FAD-binding domain HB368_09650 PF00175 Oxidoreductase NAD-binding domain HB368_09650 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_09655 PF12833 Helix-turn-helix domain HB368_09655 PF14525 AraC-binding-like domain HB368_09665 PF01613 Flavin reductase like domain HB368_09680 PF00872 Transposase, Mutator family HB368_09690 PF01738 Dienelactone hydrolase family HB368_09695 PF07690 Major Facilitator Superfamily HB368_09700 PF06719 AraC-type transcriptional regulator N-terminus HB368_09700 PF12833 Helix-turn-helix domain HB368_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09720 PF03466 LysR substrate binding domain HB368_09725 PF01144 Coenzyme A transferase HB368_09730 PF01144 Coenzyme A transferase HB368_09735 PF02667 Short chain fatty acid transporter HB368_09740 PF02803 Thiolase, C-terminal domain HB368_09740 PF00108 Thiolase, N-terminal domain HB368_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09745 PF03466 LysR substrate binding domain HB368_09750 PF03466 LysR substrate binding domain HB368_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_09765 PF10415 Fumarase C C-terminus HB368_09765 PF00206 Lyase HB368_09770 PF00593 TonB dependent receptor HB368_09770 PF07715 TonB-dependent Receptor Plug Domain HB368_09775 PF00083 Sugar (and other) transporter HB368_09790 PF00005 ABC transporter HB368_09795 PF00528 Binding-protein-dependent transport system inner membrane component HB368_09800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HB368_09815 PF07702 UTRA domain HB368_09815 PF00392 Bacterial regulatory proteins, gntR family HB368_09825 PF02525 Flavodoxin-like fold HB368_09830 PF01638 HxlR-like helix-turn-helix HB368_09835 PF12833 Helix-turn-helix domain HB368_09835 PF06445 GyrI-like small molecule binding domain HB368_09850 PF01925 Sulfite exporter TauE/SafE HB368_09855 PF00753 Metallo-beta-lactamase superfamily HB368_09855 PF04273 Putative phosphatase (DUF442) HB368_09860 PF00753 Metallo-beta-lactamase superfamily HB368_09860 PF04273 Putative phosphatase (DUF442) HB368_09865 PF00072 Response regulator receiver domain HB368_09865 PF00158 Sigma-54 interaction domain HB368_09865 PF02954 Bacterial regulatory protein, Fis family HB368_09870 PF01062 Bestrophin, RFP-TM, chloride channel HB368_09875 PF00107 Zinc-binding dehydrogenase HB368_09875 PF08240 Alcohol dehydrogenase GroES-like domain HB368_09880 PF00106 short chain dehydrogenase HB368_09885 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_09885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HB368_09890 PF00364 Biotin-requiring enzyme HB368_09890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HB368_09890 PF02817 e3 binding domain HB368_09895 PF02779 Transketolase, pyrimidine binding domain HB368_09895 PF02780 Transketolase, C-terminal domain HB368_09900 PF00676 Dehydrogenase E1 component HB368_09905 PF13737 Transposase DDE domain HB368_09910 PF04055 Radical SAM superfamily HB368_09925 PF00990 Diguanylate cyclase, GGDEF domain HB368_09925 PF08448 PAS fold HB368_09930 PF01264 Chorismate synthase HB368_09935 PF05175 Methyltransferase small domain HB368_09940 PF00291 Pyridoxal-phosphate dependent enzyme HB368_09950 PF17862 AAA+ lid domain HB368_09950 PF00004 ATPase family associated with various cellular activities (AAA) HB368_09950 PF01434 Peptidase family M41 HB368_09960 PF05166 YcgL domain HB368_09980 PF01612 3'-5' exonuclease HB368_09980 PF00570 HRDC domain HB368_09985 PF02132 RecR protein HB368_09985 PF13662 Toprim domain HB368_09990 PF02575 YbaB/EbfC DNA-binding family HB368_10000 PF01053 Cys/Met metabolism PLP-dependent enzyme HB368_10005 PF00561 alpha/beta hydrolase fold HB368_10010 PF08241 Methyltransferase domain HB368_10035 PF13936 Helix-turn-helix domain HB368_10035 PF00665 Integrase core domain HB368_10045 PF01230 HIT domain HB368_10080 PF00005 ABC transporter HB368_10085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_10095 PF02684 Lipid-A-disaccharide synthetase HB368_10100 PF00593 TonB dependent receptor HB368_10100 PF07715 TonB-dependent Receptor Plug Domain HB368_10120 PF01925 Sulfite exporter TauE/SafE HB368_10125 PF00793 DAHP synthetase I family HB368_10130 PF02654 Cobalamin-5-phosphate synthase HB368_10140 PF00300 Histidine phosphatase superfamily (branch 1) HB368_10145 PF02277 Phosphoribosyltransferase HB368_10150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HB368_10185 PF07715 TonB-dependent Receptor Plug Domain HB368_10185 PF00593 TonB dependent receptor HB368_10190 PF03737 Aldolase/RraA HB368_10200 PF04183 IucA / IucC family HB368_10200 PF06276 Ferric iron reductase FhuF-like transporter HB368_10205 PF04183 IucA / IucC family HB368_10205 PF06276 Ferric iron reductase FhuF-like transporter HB368_10210 PF07690 Major Facilitator Superfamily HB368_10215 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HB368_10220 PF04183 IucA / IucC family HB368_10220 PF06276 Ferric iron reductase FhuF-like transporter HB368_10225 PF04073 Aminoacyl-tRNA editing domain HB368_10235 PF03109 ABC1 family HB368_10240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_10240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_10240 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_10245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_10245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_10245 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_10250 PF00487 Fatty acid desaturase HB368_10255 PF12852 Cupin HB368_10255 PF12833 Helix-turn-helix domain HB368_10260 PF00639 PPIC-type PPIASE domain HB368_10260 PF09312 SurA N-terminal domain HB368_10265 PF00216 Bacterial DNA-binding protein HB368_10280 PF02082 Transcriptional regulator HB368_10285 PF00266 Aminotransferase class-V HB368_10290 PF01592 NifU-like N terminal domain HB368_10295 PF01521 Iron-sulphur cluster biosynthesis HB368_10300 PF00226 DnaJ domain HB368_10300 PF07743 HSCB C-terminal oligomerisation domain HB368_10305 PF00012 Hsp70 protein HB368_10310 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_10315 PF00211 Adenylate and Guanylate cyclase catalytic domain HB368_10325 PF00270 DEAD/DEAH box helicase HB368_10325 PF00271 Helicase conserved C-terminal domain HB368_10325 PF17757 UvrB interaction domain HB368_10325 PF03461 TRCF domain HB368_10325 PF02559 CarD-like/TRCF domain HB368_10345 PF03737 Aldolase/RraA HB368_10350 PF13460 NAD(P)H-binding HB368_10355 PF01649 Ribosomal protein S20 HB368_10365 PF00459 Inositol monophosphatase family HB368_10380 PF00005 ABC transporter HB368_10380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HB368_10385 PF00528 Binding-protein-dependent transport system inner membrane component HB368_10385 PF12911 N-terminal TM domain of oligopeptide transport permease C HB368_10390 PF00528 Binding-protein-dependent transport system inner membrane component HB368_10395 PF01432 Peptidase family M3 HB368_10400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HB368_10415 PF07715 TonB-dependent Receptor Plug Domain HB368_10415 PF00593 TonB dependent receptor HB368_10425 PF01618 MotA/TolQ/ExbB proton channel family HB368_10430 PF02472 Biopolymer transport protein ExbD/TolR HB368_10435 PF02472 Biopolymer transport protein ExbD/TolR HB368_10445 PF01274 Malate synthase HB368_10450 PF03969 AFG1-like ATPase HB368_10460 PF00743 Flavin-binding monooxygenase-like HB368_10470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HB368_10480 PF00216 Bacterial DNA-binding protein HB368_10485 PF00575 S1 RNA binding domain HB368_10490 PF02224 Cytidylate kinase HB368_10500 PF14437 MafB19-like deaminase HB368_10510 PF03167 Uracil DNA glycosylase superfamily HB368_10520 PF03934 Type II secretion system (T2SS), protein K HB368_10525 PF07963 Prokaryotic N-terminal methylation motif HB368_10525 PF11612 Type II secretion system (T2SS), protein J HB368_10530 PF02501 Type II secretion system (T2SS), protein I HB368_10530 PF07963 Prokaryotic N-terminal methylation motif HB368_10545 PF01026 TatD related DNase HB368_10555 PF09115 DNA polymerase III, delta subunit, C terminal HB368_10560 PF02348 Cytidylyltransferase HB368_10565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HB368_10570 PF00664 ABC transporter transmembrane region HB368_10570 PF00005 ABC transporter HB368_10580 PF01618 MotA/TolQ/ExbB proton channel family HB368_10585 PF17762 HTH domain found in ParB protein HB368_10585 PF02195 ParB-like nuclease domain HB368_10590 PF13614 AAA domain HB368_10595 PF02527 rRNA small subunit methyltransferase G HB368_10600 PF00483 Nucleotidyl transferase HB368_10605 PF01636 Phosphotransferase enzyme family HB368_10610 PF04453 LPS transport system D HB368_10610 PF03968 OstA-like protein HB368_10615 PF00639 PPIC-type PPIASE domain HB368_10615 PF09312 SurA N-terminal domain HB368_10620 PF01116 Fructose-bisphosphate aldolase class-II HB368_10630 PF00162 Phosphoglycerate kinase HB368_10640 PF02545 Maf-like protein HB368_10645 PF08007 Cupin superfamily protein HB368_10660 PF00375 Sodium:dicarboxylate symporter family HB368_10665 PF06912 Protein of unknown function (DUF1275) HB368_10670 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HB368_10675 PF00872 Transposase, Mutator family HB368_10680 PF00664 ABC transporter transmembrane region HB368_10680 PF00005 ABC transporter HB368_10695 PF13936 Helix-turn-helix domain HB368_10695 PF00665 Integrase core domain HB368_10705 PF01597 Glycine cleavage H-protein HB368_10710 PF02146 Sir2 family HB368_10715 PF00474 Sodium:solute symporter family HB368_10720 PF01037 Lrp/AsnC ligand binding domain HB368_10725 PF00171 Aldehyde dehydrogenase family HB368_10725 PF01619 Proline dehydrogenase HB368_10725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HB368_10725 PF14850 DNA-binding domain of Proline dehydrogenase HB368_10730 PF04229 GrpB protein HB368_10735 PF05958 tRNA (Uracil-5-)-methyltransferase HB368_10745 PF09992 Phosphodiester glycosidase HB368_10755 PF04264 YceI-like domain HB368_10765 PF02779 Transketolase, pyrimidine binding domain HB368_10765 PF00456 Transketolase, thiamine diphosphate binding domain HB368_10765 PF02780 Transketolase, C-terminal domain HB368_10770 PF02773 S-adenosylmethionine synthetase, C-terminal domain HB368_10770 PF00438 S-adenosylmethionine synthetase, N-terminal domain HB368_10770 PF02772 S-adenosylmethionine synthetase, central domain HB368_10790 PF00905 Penicillin binding protein transpeptidase domain HB368_10805 PF02075 Crossover junction endodeoxyribonuclease RuvC HB368_10810 PF03853 YjeF-related protein N-terminus HB368_10810 PF01256 Carbohydrate kinase HB368_10815 PF08331 Domain of unknown function (DUF1730) HB368_10820 PF04055 Radical SAM superfamily HB368_10820 PF06968 Biotin and Thiamin Synthesis associated domain HB368_10835 PF16970 Type-1 fimbrial protein, A HB368_10840 PF02753 Pili assembly chaperone PapD, C-terminal domain HB368_10840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HB368_10865 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HB368_10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_10875 PF03466 LysR substrate binding domain HB368_10880 PF13936 Helix-turn-helix domain HB368_10880 PF00665 Integrase core domain HB368_10900 PF00440 Bacterial regulatory proteins, tetR family HB368_10910 PF01709 Transcriptional regulator HB368_10915 PF01037 Lrp/AsnC ligand binding domain HB368_10925 PF00005 ABC transporter HB368_10930 PF00528 Binding-protein-dependent transport system inner membrane component HB368_10935 PF00528 Binding-protein-dependent transport system inner membrane component HB368_10950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_10950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB368_10960 PF00296 Luciferase-like monooxygenase HB368_10965 PF03180 NLPA lipoprotein HB368_10970 PF03180 NLPA lipoprotein HB368_10975 PF00005 ABC transporter HB368_10975 PF09383 NIL domain HB368_10980 PF00528 Binding-protein-dependent transport system inner membrane component HB368_10985 PF06071 Protein of unknown function (DUF933) HB368_10985 PF01926 50S ribosome-binding GTPase HB368_11005 PF00665 Integrase core domain HB368_11005 PF13936 Helix-turn-helix domain HB368_11015 PF03591 AzlC protein HB368_11020 PF05437 Branched-chain amino acid transport protein (AzlD) HB368_11030 PF02222 ATP-grasp domain HB368_11035 PF01909 Nucleotidyltransferase domain HB368_11035 PF01966 HD domain HB368_11035 PF08335 GlnD PII-uridylyltransferase HB368_11040 PF00155 Aminotransferase class I and II HB368_11050 PF12833 Helix-turn-helix domain HB368_11050 PF12852 Cupin HB368_11055 PF00255 Glutathione peroxidase HB368_11060 PF01641 SelR domain HB368_11065 PF00155 Aminotransferase class I and II HB368_11070 PF00375 Sodium:dicarboxylate symporter family HB368_11075 PF00710 Asparaginase, N-terminal HB368_11075 PF17763 Glutaminase/Asparaginase C-terminal domain HB368_11080 PF01336 OB-fold nucleic acid binding domain HB368_11080 PF02811 PHP domain HB368_11080 PF07733 Bacterial DNA polymerase III alpha NTPase domain HB368_11080 PF14579 Helix-hairpin-helix motif HB368_11080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HB368_11085 PF00588 SpoU rRNA Methylase family HB368_11090 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_11105 PF13192 Thioredoxin domain HB368_11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11120 PF03466 LysR substrate binding domain HB368_11125 PF01758 Sodium Bile acid symporter family HB368_11130 PF01022 Bacterial regulatory protein, arsR family HB368_11135 PF03960 ArsC family HB368_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11165 PF03466 LysR substrate binding domain HB368_11175 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HB368_11180 PF01177 Asp/Glu/Hydantoin racemase HB368_11185 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HB368_11190 PF00528 Binding-protein-dependent transport system inner membrane component HB368_11195 PF00005 ABC transporter HB368_11200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HB368_11210 PF00083 Sugar (and other) transporter HB368_11215 PF00296 Luciferase-like monooxygenase HB368_11220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB368_11220 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_11220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_11230 PF01654 Cytochrome bd terminal oxidase subunit I HB368_11235 PF02322 Cytochrome bd terminal oxidase subunit II HB368_11245 PF00155 Aminotransferase class I and II HB368_11245 PF00392 Bacterial regulatory proteins, gntR family HB368_11250 PF03466 LysR substrate binding domain HB368_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11265 PF00698 Acyl transferase domain HB368_11270 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HB368_11280 PF01039 Carboxyl transferase domain HB368_11285 PF06857 Malonate decarboxylase delta subunit (MdcD) HB368_11290 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HB368_11295 PF16957 Malonate decarboxylase, alpha subunit, transporter HB368_11300 PF07690 Major Facilitator Superfamily HB368_11315 PF00392 Bacterial regulatory proteins, gntR family HB368_11320 PF04172 LrgB-like family HB368_11325 PF03788 LrgA family HB368_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11330 PF03466 LysR substrate binding domain HB368_11335 PF02798 Glutathione S-transferase, N-terminal domain HB368_11335 PF14834 Glutathione S-transferase, C-terminal domain HB368_11340 PF02798 Glutathione S-transferase, N-terminal domain HB368_11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11345 PF03466 LysR substrate binding domain HB368_11355 PF00581 Rhodanese-like domain HB368_11360 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_11370 PF00266 Aminotransferase class-V HB368_11375 PF01810 LysE type translocator HB368_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11380 PF03466 LysR substrate binding domain HB368_11385 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB368_11390 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB368_11395 PF00005 ABC transporter HB368_11400 PF00528 Binding-protein-dependent transport system inner membrane component HB368_11405 PF00528 Binding-protein-dependent transport system inner membrane component HB368_11420 PF00072 Response regulator receiver domain HB368_11425 PF00512 His Kinase A (phospho-acceptor) domain HB368_11425 PF00072 Response regulator receiver domain HB368_11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_11425 PF09308 LuxQ, periplasmic HB368_11435 PF01037 Lrp/AsnC ligand binding domain HB368_11435 PF13404 AsnC-type helix-turn-helix domain HB368_11445 PF00717 Peptidase S24-like HB368_11470 PF06628 Catalase-related immune-responsive HB368_11470 PF18011 C-terminal domain found in long catalases HB368_11470 PF00199 Catalase HB368_11480 PF02464 Competence-damaged protein HB368_11480 PF18146 Damage-inducible protein CinA KH domain HB368_11480 PF00994 Probable molybdopterin binding domain HB368_11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11515 PF03466 LysR substrate binding domain HB368_11535 PF00501 AMP-binding enzyme HB368_11535 PF13193 AMP-binding enzyme C-terminal domain HB368_11540 PF00440 Bacterial regulatory proteins, tetR family HB368_11545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_11545 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_11545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_11550 PF01039 Carboxyl transferase domain HB368_11555 PF00378 Enoyl-CoA hydratase/isomerase HB368_11560 PF00289 Biotin carboxylase, N-terminal domain HB368_11560 PF02785 Biotin carboxylase C-terminal domain HB368_11560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB368_11560 PF18140 Propionyl-coenzyme A carboxylase BT domain HB368_11560 PF00364 Biotin-requiring enzyme HB368_11565 PF00682 HMGL-like HB368_11570 PF03466 LysR substrate binding domain HB368_11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_11585 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_11585 PF12806 Acetyl-CoA dehydrogenase C-terminal like HB368_11595 PF07690 Major Facilitator Superfamily HB368_11605 PF01144 Coenzyme A transferase HB368_11610 PF01144 Coenzyme A transferase HB368_11615 PF07690 Major Facilitator Superfamily HB368_11620 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_11620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_11620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_11625 PF00378 Enoyl-CoA hydratase/isomerase HB368_11635 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HB368_11635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB368_11635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB368_11640 PF02803 Thiolase, C-terminal domain HB368_11640 PF00108 Thiolase, N-terminal domain HB368_11645 PF09339 IclR helix-turn-helix domain HB368_11650 PF07690 Major Facilitator Superfamily HB368_11655 PF03060 Nitronate monooxygenase HB368_11660 PF00378 Enoyl-CoA hydratase/isomerase HB368_11665 PF09339 IclR helix-turn-helix domain HB368_11670 PF02515 CoA-transferase family III HB368_11675 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_11675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_11675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_11680 PF07690 Major Facilitator Superfamily HB368_11685 PF13419 Haloacid dehalogenase-like hydrolase HB368_11690 PF00266 Aminotransferase class-V HB368_11695 PF01266 FAD dependent oxidoreductase HB368_11700 PF00528 Binding-protein-dependent transport system inner membrane component HB368_11705 PF08402 TOBE domain HB368_11705 PF00005 ABC transporter HB368_11715 PF00392 Bacterial regulatory proteins, gntR family HB368_11715 PF07702 UTRA domain HB368_11720 PF00842 Alanine racemase, C-terminal domain HB368_11720 PF01168 Alanine racemase, N-terminal domain HB368_11725 PF01494 FAD binding domain HB368_11730 PF01614 Bacterial transcriptional regulator HB368_11730 PF09339 IclR helix-turn-helix domain HB368_11735 PF02525 Flavodoxin-like fold HB368_11740 PF03466 LysR substrate binding domain HB368_11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11745 PF01292 Prokaryotic cytochrome b561 HB368_11750 PF00199 Catalase HB368_11785 PF00300 Histidine phosphatase superfamily (branch 1) HB368_11790 PF00872 Transposase, Mutator family HB368_11805 PF03061 Thioesterase superfamily HB368_11810 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_11815 PF07848 PaaX-like protein HB368_11815 PF08223 PaaX-like protein C-terminal domain HB368_11820 PF00501 AMP-binding enzyme HB368_11820 PF14535 AMP-binding enzyme C-terminal domain HB368_11825 PF00108 Thiolase, N-terminal domain HB368_11825 PF02803 Thiolase, C-terminal domain HB368_11830 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HB368_11830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB368_11830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB368_11835 PF00378 Enoyl-CoA hydratase/isomerase HB368_11840 PF00378 Enoyl-CoA hydratase/isomerase HB368_11845 PF00175 Oxidoreductase NAD-binding domain HB368_11845 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_11845 PF00970 Oxidoreductase FAD-binding domain HB368_11850 PF01883 Iron-sulfur cluster assembly protein HB368_11855 PF05138 Phenylacetic acid catabolic protein HB368_11860 PF06243 Phenylacetic acid degradation B HB368_11865 PF05138 Phenylacetic acid catabolic protein HB368_11870 PF00171 Aldehyde dehydrogenase family HB368_11870 PF01575 MaoC like domain HB368_11875 PF03313 Serine dehydratase alpha chain HB368_11875 PF03315 Serine dehydratase beta chain HB368_11880 PF13520 Amino acid permease HB368_11885 PF00171 Aldehyde dehydrogenase family HB368_11890 PF00083 Sugar (and other) transporter HB368_11900 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_11900 PF04324 BFD-like [2Fe-2S] binding domain HB368_11910 PF01266 FAD dependent oxidoreductase HB368_11910 PF01266 FAD dependent oxidoreductase HB368_11915 PF05544 Proline racemase HB368_11920 PF00392 Bacterial regulatory proteins, gntR family HB368_11930 PF00701 Dihydrodipicolinate synthetase family HB368_11940 PF09278 MerR, DNA binding HB368_11940 PF00376 MerR family regulatory protein HB368_11950 PF02677 Epoxyqueuosine reductase QueH HB368_11965 PF07690 Major Facilitator Superfamily HB368_11970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HB368_11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_11980 PF03466 LysR substrate binding domain HB368_12010 PF10431 C-terminal, D2-small domain, of ClpB protein HB368_12010 PF00004 ATPase family associated with various cellular activities (AAA) HB368_12010 PF07724 AAA domain (Cdc48 subfamily) HB368_12010 PF17871 AAA lid domain HB368_12020 PF00691 OmpA family HB368_12020 PF01389 OmpA-like transmembrane domain HB368_12095 PF00665 Integrase core domain HB368_12095 PF13936 Helix-turn-helix domain HB368_12145 PF00005 ABC transporter HB368_12150 PF00497 Bacterial extracellular solute-binding proteins, family 3 HB368_12155 PF01425 Amidase HB368_12160 PF08753 NikR C terminal nickel binding domain HB368_12160 PF01402 Ribbon-helix-helix protein, copG family HB368_12175 PF01638 HxlR-like helix-turn-helix HB368_12180 PF02525 Flavodoxin-like fold HB368_12185 PF02785 Biotin carboxylase C-terminal domain HB368_12185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB368_12185 PF00289 Biotin carboxylase, N-terminal domain HB368_12200 PF13823 Alcohol dehydrogenase GroES-associated HB368_12200 PF08240 Alcohol dehydrogenase GroES-like domain HB368_12200 PF00107 Zinc-binding dehydrogenase HB368_12210 PF00440 Bacterial regulatory proteins, tetR family HB368_12215 PF00872 Transposase, Mutator family HB368_12230 PF00654 Voltage gated chloride channel HB368_12235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HB368_12235 PF00364 Biotin-requiring enzyme HB368_12235 PF02785 Biotin carboxylase C-terminal domain HB368_12235 PF00289 Biotin carboxylase, N-terminal domain HB368_12245 PF07286 Protein of unknown function (DUF1445) HB368_12250 PF03746 LamB/YcsF family HB368_12255 PF01566 Natural resistance-associated macrophage protein HB368_12260 PF03466 LysR substrate binding domain HB368_12260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_12275 PF13936 Helix-turn-helix domain HB368_12275 PF00665 Integrase core domain HB368_12300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB368_12300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB368_12320 PF07690 Major Facilitator Superfamily HB368_12330 PF03279 Bacterial lipid A biosynthesis acyltransferase HB368_12335 PF03707 Bacterial signalling protein N terminal repeat HB368_12335 PF00563 EAL domain HB368_12335 PF00990 Diguanylate cyclase, GGDEF domain HB368_12340 PF00892 EamA-like transporter family HB368_12345 PF01037 Lrp/AsnC ligand binding domain HB368_12350 PF05190 MutS family domain IV HB368_12350 PF05192 MutS domain III HB368_12350 PF00488 MutS domain V HB368_12350 PF05188 MutS domain II HB368_12350 PF01624 MutS domain I HB368_12360 PF00037 4Fe-4S binding domain HB368_12360 PF11953 Domain of unknown function (DUF3470) HB368_12370 PF01596 O-methyltransferase HB368_12380 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_12385 PF01205 Uncharacterized protein family UPF0029 HB368_12395 PF00005 ABC transporter HB368_12395 PF03412 Peptidase C39 family HB368_12395 PF00664 ABC transporter transmembrane region HB368_12400 PF02321 Outer membrane efflux protein HB368_12410 PF00005 ABC transporter HB368_12410 PF12399 Branched-chain amino acid ATP-binding cassette transporter HB368_12415 PF03968 OstA-like protein HB368_12430 PF00571 CBS domain HB368_12430 PF01380 SIS domain HB368_12435 PF09190 DALR domain HB368_12435 PF01406 tRNA synthetases class I (C) catalytic domain HB368_12450 PF00665 Integrase core domain HB368_12450 PF13936 Helix-turn-helix domain HB368_12475 PF01638 HxlR-like helix-turn-helix HB368_12480 PF07690 Major Facilitator Superfamily HB368_12505 PF03807 NADP oxidoreductase coenzyme F420-dependent HB368_12505 PF14748 Pyrroline-5-carboxylate reductase dimerisation HB368_12515 PF00313 'Cold-shock' DNA-binding domain HB368_12520 PF01810 LysE type translocator HB368_12530 PF13737 Transposase DDE domain HB368_12560 PF02601 Exonuclease VII, large subunit HB368_12560 PF13742 OB-fold nucleic acid binding domain HB368_12595 PF09278 MerR, DNA binding HB368_12595 PF00376 MerR family regulatory protein HB368_12600 PF00403 Heavy-metal-associated domain HB368_12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_12610 PF03466 LysR substrate binding domain HB368_12615 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB368_12615 PF00355 Rieske [2Fe-2S] domain HB368_12620 PF00866 Ring hydroxylating beta subunit HB368_12625 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_12625 PF00175 Oxidoreductase NAD-binding domain HB368_12625 PF00970 Oxidoreductase FAD-binding domain HB368_12630 PF00106 short chain dehydrogenase HB368_12635 PF03594 Benzoate membrane transport protein HB368_12640 PF07690 Major Facilitator Superfamily HB368_12650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HB368_12650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HB368_12655 PF00271 Helicase conserved C-terminal domain HB368_12655 PF04408 Helicase associated domain (HA2) HB368_12655 PF11898 Domain of unknown function (DUF3418) HB368_12655 PF00270 DEAD/DEAH box helicase HB368_12655 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HB368_12660 PF00578 AhpC/TSA family HB368_12660 PF10417 C-terminal domain of 1-Cys peroxiredoxin HB368_12680 PF13192 Thioredoxin domain HB368_12680 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_12690 PF02798 Glutathione S-transferase, N-terminal domain HB368_12690 PF00043 Glutathione S-transferase, C-terminal domain HB368_12700 PF02390 Putative methyltransferase HB368_12720 PF13417 Glutathione S-transferase, N-terminal domain HB368_12720 PF00043 Glutathione S-transferase, C-terminal domain HB368_12730 PF13488 Glycine zipper HB368_12730 PF00691 OmpA family HB368_12735 PF01979 Amidohydrolase family HB368_12740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HB368_12740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HB368_12750 PF01170 Putative RNA methylase family UPF0020 HB368_12750 PF02926 THUMP domain HB368_12750 PF10672 S-adenosylmethionine-dependent methyltransferase HB368_12765 PF02861 Clp amino terminal domain, pathogenicity island component HB368_12765 PF07724 AAA domain (Cdc48 subfamily) HB368_12765 PF00004 ATPase family associated with various cellular activities (AAA) HB368_12765 PF10431 C-terminal, D2-small domain, of ClpB protein HB368_12765 PF17871 AAA lid domain HB368_12780 PF00872 Transposase, Mutator family HB368_12790 PF02566 OsmC-like protein HB368_12795 PF00027 Cyclic nucleotide-binding domain HB368_12795 PF13545 Crp-like helix-turn-helix domain HB368_12800 PF00248 Aldo/keto reductase family HB368_12815 PF00709 Adenylosuccinate synthetase HB368_12820 PF13393 Histidyl-tRNA synthetase HB368_12825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HB368_12825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HB368_12830 PF02272 DHHA1 domain HB368_12830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HB368_12830 PF01411 tRNA synthetases class II (A) HB368_12840 PF13936 Helix-turn-helix domain HB368_12840 PF00665 Integrase core domain HB368_12860 PF00717 Peptidase S24-like HB368_12865 PF11799 impB/mucB/samB family C-terminal domain HB368_12865 PF00817 impB/mucB/samB family HB368_12865 PF11798 IMS family HHH motif HB368_12865 PF13438 Domain of unknown function (DUF4113) HB368_12930 PF00712 DNA polymerase III beta subunit, N-terminal domain HB368_12930 PF02767 DNA polymerase III beta subunit, central domain HB368_12930 PF02768 DNA polymerase III beta subunit, C-terminal domain HB368_13115 PF07007 Lysozyme inhibitor LprI HB368_13160 PF01695 IstB-like ATP binding protein HB368_13170 PF00145 C-5 cytosine-specific DNA methylase HB368_13255 PF00929 Exonuclease HB368_13295 PF01842 ACT domain HB368_13295 PF13840 ACT domain HB368_13295 PF00696 Amino acid kinase family HB368_13300 PF02599 Global regulator protein family HB368_13305 PF01351 Ribonuclease HII HB368_13315 PF01292 Prokaryotic cytochrome b561 HB368_13320 PF00962 Adenosine/AMP deaminase HB368_13325 PF00860 Permease family HB368_13335 PF00743 Flavin-binding monooxygenase-like HB368_13340 PF00106 short chain dehydrogenase HB368_13350 PF02678 Pirin HB368_13350 PF17954 Quercetinase C-terminal cupin domain HB368_13355 PF17932 Tetracyclin repressor-like, C-terminal domain HB368_13355 PF00440 Bacterial regulatory proteins, tetR family HB368_13365 PF00106 short chain dehydrogenase HB368_13370 PF00743 Flavin-binding monooxygenase-like HB368_13375 PF04072 Leucine carboxyl methyltransferase HB368_13385 PF00743 Flavin-binding monooxygenase-like HB368_13390 PF00106 short chain dehydrogenase HB368_13395 PF07859 alpha/beta hydrolase fold HB368_13405 PF03573 outer membrane porin, OprD family HB368_13410 PF07690 Major Facilitator Superfamily HB368_13415 PF00884 Sulfatase HB368_13430 PF00355 Rieske [2Fe-2S] domain HB368_13435 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_13435 PF00175 Oxidoreductase NAD-binding domain HB368_13450 PF07690 Major Facilitator Superfamily HB368_13455 PF00378 Enoyl-CoA hydratase/isomerase HB368_13460 PF00171 Aldehyde dehydrogenase family HB368_13470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_13470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_13470 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_13475 PF03573 outer membrane porin, OprD family HB368_13490 PF07519 Tannase and feruloyl esterase HB368_13495 PF07729 FCD domain HB368_13495 PF00392 Bacterial regulatory proteins, gntR family HB368_13500 PF00171 Aldehyde dehydrogenase family HB368_13505 PF00701 Dihydrodipicolinate synthetase family HB368_13510 PF13378 Enolase C-terminal domain-like HB368_13515 PF07690 Major Facilitator Superfamily HB368_13520 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HB368_13520 PF08666 SAF domain HB368_13525 PF00892 EamA-like transporter family HB368_13530 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HB368_13530 PF12833 Helix-turn-helix domain HB368_13535 PF00171 Aldehyde dehydrogenase family HB368_13550 PF00324 Amino acid permease HB368_13555 PF04958 Arginine N-succinyltransferase beta subunit HB368_13560 PF00202 Aminotransferase class-III HB368_13570 PF00171 Aldehyde dehydrogenase family HB368_13580 PF07729 FCD domain HB368_13580 PF00392 Bacterial regulatory proteins, gntR family HB368_13595 PF01266 FAD dependent oxidoreductase HB368_13600 PF00324 Amino acid permease HB368_13620 PF03180 NLPA lipoprotein HB368_13630 PF00665 Integrase core domain HB368_13630 PF13936 Helix-turn-helix domain HB368_13655 PF13087 AAA domain HB368_13655 PF13087 AAA domain HB368_13655 PF13195 Protein of unknown function (DUF4011) HB368_13655 PF13086 AAA domain HB368_13655 PF13086 AAA domain HB368_13655 PF13195 Protein of unknown function (DUF4011) HB368_13680 PF00270 DEAD/DEAH box helicase HB368_13680 PF09382 RQC domain HB368_13680 PF16124 RecQ zinc-binding HB368_13680 PF00271 Helicase conserved C-terminal domain HB368_13680 PF00570 HRDC domain HB368_13785 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HB368_13790 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HB368_13795 PF00872 Transposase, Mutator family HB368_13805 PF00589 Phage integrase family HB368_13805 PF13356 Arm DNA-binding domain HB368_13815 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_13815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_13820 PF00764 Arginosuccinate synthase HB368_13825 PF00563 EAL domain HB368_13825 PF01590 GAF domain HB368_13825 PF00990 Diguanylate cyclase, GGDEF domain HB368_13825 PF00360 Phytochrome region HB368_13830 PF01979 Amidohydrolase family HB368_13835 PF00929 Exonuclease HB368_13845 PF00593 TonB dependent receptor HB368_13845 PF07715 TonB-dependent Receptor Plug Domain HB368_13850 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_13850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_13855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HB368_13855 PF00005 ABC transporter HB368_13860 PF00528 Binding-protein-dependent transport system inner membrane component HB368_13860 PF12911 N-terminal TM domain of oligopeptide transport permease C HB368_13865 PF00528 Binding-protein-dependent transport system inner membrane component HB368_13870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HB368_13875 PF01464 Transglycosylase SLT domain HB368_13875 PF01476 LysM domain HB368_13880 PF00929 Exonuclease HB368_13890 PF00293 NUDIX domain HB368_13890 PF09297 NADH pyrophosphatase zinc ribbon domain HB368_13900 PF04972 BON domain HB368_13905 PF02021 Uncharacterised protein family UPF0102 HB368_13910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HB368_13920 PF03466 LysR substrate binding domain HB368_13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_13925 PF01810 LysE type translocator HB368_13935 PF13411 MerR HTH family regulatory protein HB368_13945 PF01494 FAD binding domain HB368_13950 PF01494 FAD binding domain HB368_13955 PF00557 Metallopeptidase family M24 HB368_13955 PF05195 Aminopeptidase P, N-terminal domain HB368_13985 PF08019 Phosphoethanolamine transferase EptA/EptB HB368_13985 PF00884 Sulfatase HB368_14105 PF01381 Helix-turn-helix HB368_14160 PF01812 5-formyltetrahydrofolate cyclo-ligase family HB368_14170 PF00004 ATPase family associated with various cellular activities (AAA) HB368_14170 PF05362 Lon protease (S16) C-terminal proteolytic domain HB368_14170 PF02190 ATP-dependent protease La (LON) substrate-binding domain HB368_14175 PF02590 Predicted SPOUT methyltransferase HB368_14180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HB368_14190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HB368_14190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HB368_14195 PF04060 Putative Fe-S cluster HB368_14200 PF00730 HhH-GPD superfamily base excision DNA repair protein HB368_14200 PF00633 Helix-hairpin-helix motif HB368_14200 PF10576 Iron-sulfur binding domain of endonuclease III HB368_14210 PF05191 Adenylate kinase, active site lid HB368_14225 PF00905 Penicillin binding protein transpeptidase domain HB368_14225 PF03717 Penicillin-binding Protein dimerisation domain HB368_14240 PF02492 CobW/HypB/UreG, nucleotide-binding domain HB368_14245 PF01730 UreF HB368_14250 PF02814 UreE urease accessory protein, N-terminal domain HB368_14250 PF05194 UreE urease accessory protein, C-terminal domain HB368_14255 PF00449 Urease alpha-subunit, N-terminal domain HB368_14255 PF01979 Amidohydrolase family HB368_14260 PF00699 Urease beta subunit HB368_14265 PF00547 Urease, gamma subunit HB368_14270 PF01774 UreD urease accessory protein HB368_14285 PF00463 Isocitrate lyase family HB368_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_14290 PF03466 LysR substrate binding domain HB368_14295 PF01595 Cyclin M transmembrane N-terminal domain HB368_14295 PF00571 CBS domain HB368_14295 PF03471 Transporter associated domain HB368_14300 PF03600 Citrate transporter HB368_14315 PF00009 Elongation factor Tu GTP binding domain HB368_14320 PF01507 Phosphoadenosine phosphosulfate reductase family HB368_14330 PF14052 Capsule assembly protein Wzi HB368_14335 PF01336 OB-fold nucleic acid binding domain HB368_14335 PF00152 tRNA synthetases class II (D, K and N) HB368_14350 PF00301 Rubredoxin HB368_14355 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_14355 PF18113 Rubredoxin binding C-terminal domain HB368_14360 PF00561 alpha/beta hydrolase fold HB368_14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_14365 PF03466 LysR substrate binding domain HB368_14380 PF13089 Polyphosphate kinase N-terminal domain HB368_14380 PF02503 Polyphosphate kinase middle domain HB368_14380 PF17941 Polyphosphate kinase C-terminal domain 1 HB368_14380 PF13090 Polyphosphate kinase C-terminal domain 2 HB368_14385 PF00912 Transglycosylase HB368_14390 PF01694 Rhomboid family HB368_14400 PF00005 ABC transporter HB368_14405 PF13472 GDSL-like Lipase/Acylhydrolase family HB368_14410 PF00484 Carbonic anhydrase HB368_14415 PF00561 alpha/beta hydrolase fold HB368_14425 PF07715 TonB-dependent Receptor Plug Domain HB368_14425 PF00593 TonB dependent receptor HB368_14430 PF01106 NifU-like domain HB368_14430 PF01521 Iron-sulphur cluster biosynthesis HB368_14440 PF00884 Sulfatase HB368_14445 PF03781 Sulfatase-modifying factor enzyme 1 HB368_14460 PF00291 Pyridoxal-phosphate dependent enzyme HB368_14465 PF01384 Phosphate transporter family HB368_14470 PF02574 Homocysteine S-methyltransferase HB368_14470 PF02310 B12 binding domain HB368_14470 PF02607 B12 binding domain HB368_14470 PF00809 Pterin binding enzyme HB368_14470 PF02965 Vitamin B12 dependent methionine synthase, activation domain HB368_14480 PF13737 Transposase DDE domain HB368_14495 PF01263 Aldose 1-epimerase HB368_14500 PF07690 Major Facilitator Superfamily HB368_14505 PF12833 Helix-turn-helix domain HB368_14505 PF02311 AraC-like ligand binding domain HB368_14510 PF04960 Glutaminase HB368_14515 PF01327 Polypeptide deformylase HB368_14520 PF07690 Major Facilitator Superfamily HB368_14530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HB368_14530 PF00205 Thiamine pyrophosphate enzyme, central domain HB368_14530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HB368_14535 PF00171 Aldehyde dehydrogenase family HB368_14540 PF01958 Domain of unknown function DUF108 HB368_14540 PF03447 Homoserine dehydrogenase, NAD binding domain HB368_14550 PF12697 Alpha/beta hydrolase family HB368_14560 PF07690 Major Facilitator Superfamily HB368_14565 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_14565 PF14759 Reductase C-terminal HB368_14570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HB368_14580 PF00355 Rieske [2Fe-2S] domain HB368_14590 PF00355 Rieske [2Fe-2S] domain HB368_14595 PF09339 IclR helix-turn-helix domain HB368_14595 PF01614 Bacterial transcriptional regulator HB368_14610 PF00378 Enoyl-CoA hydratase/isomerase HB368_14620 PF00535 Glycosyl transferase family 2 HB368_14625 PF01522 Polysaccharide deacetylase HB368_14625 PF14883 Hypothetical glycosyl hydrolase family 13 HB368_14630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB368_14635 PF07152 YaeQ protein HB368_14640 PF00375 Sodium:dicarboxylate symporter family HB368_14645 PF07683 Cobalamin synthesis protein cobW C-terminal domain HB368_14645 PF02492 CobW/HypB/UreG, nucleotide-binding domain HB368_14655 PF03061 Thioesterase superfamily HB368_14665 PF02028 BCCT, betaine/carnitine/choline family transporter HB368_14670 PF02028 BCCT, betaine/carnitine/choline family transporter HB368_14675 PF13977 BetI-type transcriptional repressor, C-terminal HB368_14675 PF00440 Bacterial regulatory proteins, tetR family HB368_14680 PF00171 Aldehyde dehydrogenase family HB368_14685 PF00732 GMC oxidoreductase HB368_14685 PF05199 GMC oxidoreductase HB368_14690 PF06039 Malate:quinone oxidoreductase (Mqo) HB368_14700 PF02574 Homocysteine S-methyltransferase HB368_14705 PF13520 Amino acid permease HB368_14730 PF01126 Heme oxygenase HB368_14750 PF07715 TonB-dependent Receptor Plug Domain HB368_14750 PF00593 TonB dependent receptor HB368_14760 PF08281 Sigma-70, region 4 HB368_14760 PF04542 Sigma-70 region 2 HB368_14770 PF00701 Dihydrodipicolinate synthetase family HB368_14775 PF00083 Sugar (and other) transporter HB368_14810 PF07690 Major Facilitator Superfamily HB368_14815 PF13533 Biotin-lipoyl like HB368_14820 PF03061 Thioesterase superfamily HB368_14825 PF00490 Delta-aminolevulinic acid dehydratase HB368_14830 PF01266 FAD dependent oxidoreductase HB368_14835 PF01370 NAD dependent epimerase/dehydratase family HB368_14835 PF08338 Domain of unknown function (DUF1731) HB368_14855 PF00149 Calcineurin-like phosphoesterase HB368_14855 PF12320 Type 5 capsule protein repressor C-terminal domain HB368_14865 PF01168 Alanine racemase, N-terminal domain HB368_14870 PF00437 Type II/IV secretion system protein HB368_14875 PF00437 Type II/IV secretion system protein HB368_14880 PF01475 Ferric uptake regulator family HB368_14885 PF04355 SmpA / OmlA family HB368_14890 PF03658 RnfH family Ubiquitin HB368_14900 PF01814 Hemerythrin HHE cation binding domain HB368_14905 PF13230 Glutamine amidotransferases class-II HB368_14915 PF00696 Amino acid kinase family HB368_14920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB368_14920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB368_14920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB368_14920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB368_14925 PF00692 dUTPase HB368_14930 PF13361 UvrD-like helicase C-terminal domain HB368_14930 PF00580 UvrD/REP helicase N-terminal domain HB368_14935 PF00691 OmpA family HB368_14935 PF13488 Glycine zipper HB368_14940 PF01553 Acyltransferase HB368_14950 PF03775 Septum formation inhibitor MinC, C-terminal domain HB368_14955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HB368_14960 PF03776 Septum formation topological specificity factor MinE HB368_14970 PF01810 LysE type translocator HB368_14975 PF09397 Ftsk gamma domain HB368_14975 PF17854 FtsK alpha domain HB368_14975 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HB368_14975 PF01580 FtsK/SpoIIIE family HB368_14980 PF07992 Pyridine nucleotide-disulphide oxidoreductase HB368_14985 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HB368_14990 PF04376 Arginine-tRNA-protein transferase, N terminus HB368_14990 PF04377 Arginine-tRNA-protein transferase, C terminus HB368_14995 PF00583 Acetyltransferase (GNAT) family HB368_15010 PF03144 Elongation factor Tu domain 2 HB368_15010 PF00009 Elongation factor Tu GTP binding domain HB368_15010 PF03143 Elongation factor Tu C-terminal domain HB368_15015 PF00679 Elongation factor G C-terminus HB368_15015 PF03144 Elongation factor Tu domain 2 HB368_15015 PF03764 Elongation factor G, domain IV HB368_15015 PF14492 Elongation Factor G, domain II HB368_15015 PF00009 Elongation factor Tu GTP binding domain HB368_15020 PF00177 Ribosomal protein S7p/S5e HB368_15025 PF00164 Ribosomal protein S12/S23 HB368_15035 PF02801 Beta-ketoacyl synthase, C-terminal domain HB368_15035 PF00109 Beta-ketoacyl synthase, N-terminal domain HB368_15045 PF02678 Pirin HB368_15045 PF05726 Pirin C-terminal cupin domain HB368_15055 PF00795 Carbon-nitrogen hydrolase HB368_15055 PF02540 NAD synthase HB368_15070 PF00111 2Fe-2S iron-sulfur cluster binding domain HB368_15070 PF00970 Oxidoreductase FAD-binding domain HB368_15070 PF00175 Oxidoreductase NAD-binding domain HB368_15075 PF00171 Aldehyde dehydrogenase family HB368_15080 PF00355 Rieske [2Fe-2S] domain HB368_15080 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HB368_15100 PF00037 4Fe-4S binding domain HB368_15105 PF01467 Cytidylyltransferase-like HB368_15110 PF13356 Arm DNA-binding domain HB368_15110 PF00589 Phage integrase family HB368_15170 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HB368_15285 PF04607 Region found in RelA / SpoT proteins HB368_15315 PF00149 Calcineurin-like phosphoesterase HB368_15360 PF00145 C-5 cytosine-specific DNA methylase HB368_15365 PF00772 DnaB-like helicase N terminal domain HB368_15365 PF03796 DnaB-like helicase C terminal domain HB368_15400 PF12161 HsdM N-terminal domain HB368_15400 PF02384 N-6 DNA Methylase HB368_15425 PF12684 PDDEXK-like domain of unknown function (DUF3799) HB368_15425 PF06630 Enterobacterial exodeoxyribonuclease VIII HB368_15475 PF01668 SmpB protein HB368_15490 PF00849 RNA pseudouridylate synthase HB368_15490 PF01479 S4 domain HB368_15495 PF13525 Outer membrane lipoprotein HB368_15500 PF08275 DNA primase catalytic core, N-terminal domain HB368_15500 PF10410 DnaB-helicase binding domain of primase HB368_15500 PF08278 DNA primase DnaG DnaB-binding HB368_15500 PF01807 CHC2 zinc finger HB368_15505 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HB368_15505 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HB368_15505 PF01488 Shikimate / quinate 5-dehydrogenase HB368_15515 PF03550 Outer membrane lipoprotein LolB HB368_15520 PF00288 GHMP kinases N terminal domain HB368_15520 PF08544 GHMP kinases C terminal HB368_15545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HB368_15545 PF14572 Phosphoribosyl synthetase-associated domain HB368_15550 PF01386 Ribosomal L25p family HB368_15555 PF01195 Peptidyl-tRNA hydrolase HB368_15560 PF02261 Aspartate decarboxylase HB368_15575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HB368_15585 PF08543 Phosphomethylpyrimidine kinase HB368_15585 PF03070 TENA/THI-4/PQQC family HB368_15585 PF02581 Thiamine monophosphate synthase HB368_15590 PF04972 BON domain HB368_15590 PF01476 LysM domain HB368_15595 PF00550 Phosphopantetheine attachment site HB368_15605 PF00698 Acyl transferase domain HB368_15610 PF01783 Ribosomal L32p protein family HB368_15615 PF02620 Large ribosomal RNA subunit accumulation protein YceD HB368_15620 PF04315 Elongation factor P hydroxylase HB368_15625 PF01300 Telomere recombination HB368_15630 PF02616 Segregation and condensation protein ScpA HB368_15635 PF04079 Segregation and condensation complex subunit ScpB HB368_15640 PF01479 S4 domain HB368_15640 PF00849 RNA pseudouridylate synthase HB368_15655 PF00155 Aminotransferase class I and II HB368_15660 PF00202 Aminotransferase class-III HB368_15660 PF06968 Biotin and Thiamin Synthesis associated domain HB368_15660 PF04055 Radical SAM superfamily HB368_15665 PF08241 Methyltransferase domain HB368_15665 PF12697 Alpha/beta hydrolase family HB368_15670 PF02358 Trehalose-phosphatase HB368_15675 PF00982 Glycosyltransferase family 20 HB368_15680 PF07690 Major Facilitator Superfamily HB368_15685 PF00210 Ferritin-like domain HB368_15690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HB368_15690 PF12826 Helix-hairpin-helix motif HB368_15690 PF03120 NAD-dependent DNA ligase OB-fold domain HB368_15690 PF01653 NAD-dependent DNA ligase adenylation domain HB368_15690 PF00533 BRCA1 C Terminus (BRCT) domain HB368_15700 PF02463 RecF/RecN/SMC N terminal domain HB368_15700 PF06470 SMC proteins Flexible Hinge Domain HB368_15710 PF01925 Sulfite exporter TauE/SafE HB368_15720 PF03309 Type III pantothenate kinase HB368_15725 PF00448 SRP54-type protein, GTPase domain HB368_15725 PF02978 Signal peptide binding domain HB368_15725 PF02881 SRP54-type protein, helical bundle domain HB368_15735 PF01207 Dihydrouridine synthase (Dus) HB368_15765 PF00692 dUTPase HB368_15780 PF01048 Phosphorylase superfamily HB368_15785 PF10609 NUBPL iron-transfer P-loop NTPase HB368_15795 PF01588 Putative tRNA binding domain HB368_15795 PF09334 tRNA synthetases class I (M) HB368_15820 PF13533 Biotin-lipoyl like HB368_15825 PF00291 Pyridoxal-phosphate dependent enzyme HB368_15840 PF05552 Conserved TM helix HB368_15855 PF00970 Oxidoreductase FAD-binding domain HB368_15855 PF00175 Oxidoreductase NAD-binding domain HB368_15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_15860 PF03466 LysR substrate binding domain HB368_15865 PF00313 'Cold-shock' DNA-binding domain HB368_15875 PF00361 Proton-conducting membrane transporter HB368_15880 PF00361 Proton-conducting membrane transporter HB368_15885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HB368_15885 PF00361 Proton-conducting membrane transporter HB368_15890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HB368_15895 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HB368_15900 PF12838 4Fe-4S dicluster domain HB368_15905 PF00146 NADH dehydrogenase HB368_15910 PF00384 Molybdopterin oxidoreductase HB368_15910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HB368_15910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HB368_15915 PF10531 SLBB domain HB368_15915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HB368_15915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HB368_15925 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HB368_15925 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HB368_15930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HB368_15935 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HB368_15940 PF17151 Periplasmic sensor domain HB368_15940 PF00990 Diguanylate cyclase, GGDEF domain HB368_15950 PF00512 His Kinase A (phospho-acceptor) domain HB368_15950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_15950 PF00672 HAMP domain HB368_15955 PF00072 Response regulator receiver domain HB368_15955 PF00486 Transcriptional regulatory protein, C terminal HB368_15965 PF00317 Ribonucleotide reductase, all-alpha domain HB368_15965 PF02867 Ribonucleotide reductase, barrel domain HB368_15965 PF03477 ATP cone domain HB368_15975 PF00268 Ribonucleotide reductase, small chain HB368_15990 PF01613 Flavin reductase like domain HB368_15995 PF01717 Cobalamin-independent synthase, Catalytic domain HB368_15995 PF08267 Cobalamin-independent synthase, N-terminal domain HB368_16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_16005 PF03466 LysR substrate binding domain HB368_16010 PF01810 LysE type translocator HB368_16020 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HB368_16020 PF12833 Helix-turn-helix domain HB368_16035 PF03466 LysR substrate binding domain HB368_16035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_16040 PF07690 Major Facilitator Superfamily HB368_16050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_16050 PF03466 LysR substrate binding domain HB368_16055 PF00890 FAD binding domain HB368_16055 PF14537 Cytochrome c3 HB368_16065 PF02515 CoA-transferase family III HB368_16070 PF07690 Major Facilitator Superfamily HB368_16075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_16075 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_16075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_16080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_16080 PF03466 LysR substrate binding domain HB368_16085 PF08240 Alcohol dehydrogenase GroES-like domain HB368_16085 PF00107 Zinc-binding dehydrogenase HB368_16090 PF00962 Adenosine/AMP deaminase HB368_16115 PF02445 Quinolinate synthetase A protein HB368_16120 PF01960 ArgJ family HB368_16125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HB368_16125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HB368_16130 PF00893 Small Multidrug Resistance protein HB368_16140 PF05275 Copper resistance protein B precursor (CopB) HB368_16145 PF07732 Multicopper oxidase HB368_16145 PF07731 Multicopper oxidase HB368_16145 PF00394 Multicopper oxidase HB368_16160 PF00834 Ribulose-phosphate 3 epimerase family HB368_16170 PF00756 Putative esterase HB368_16180 PF04445 Putative SAM-dependent methyltransferase HB368_16185 PF00814 Glycoprotease family HB368_16190 PF00132 Bacterial transferase hexapeptide (six repeats) HB368_16195 PF00293 NUDIX domain HB368_16210 PF00872 Transposase, Mutator family HB368_16220 PF04715 Anthranilate synthase component I, N terminal region HB368_16220 PF00425 chorismate binding enzyme HB368_16225 PF00155 Aminotransferase class I and II HB368_16230 PF00815 Histidinol dehydrogenase HB368_16235 PF01634 ATP phosphoribosyltransferase HB368_16240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HB368_16245 PF01722 BolA-like protein HB368_16250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HB368_16255 PF00309 Sigma-54 factor, Activator interacting domain (AID) HB368_16255 PF04552 Sigma-54, DNA binding domain HB368_16255 PF04963 Sigma-54 factor, core binding domain HB368_16300 PF00795 Carbon-nitrogen hydrolase HB368_16310 PF01047 MarR family HB368_16315 PF02566 OsmC-like protein HB368_16320 PF00437 Type II/IV secretion system protein HB368_16340 PF01367 5'-3' exonuclease, C-terminal SAM fold HB368_16340 PF01612 3'-5' exonuclease HB368_16340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HB368_16340 PF00476 DNA polymerase family A HB368_16345 PF02325 YGGT family HB368_16350 PF03807 NADP oxidoreductase coenzyme F420-dependent HB368_16350 PF14748 Pyrroline-5-carboxylate reductase dimerisation HB368_16355 PF09179 TilS substrate binding domain HB368_16355 PF01171 PP-loop family HB368_16355 PF11734 TilS substrate C-terminal domain HB368_16360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HB368_16365 PF02541 Ppx/GppA phosphatase family HB368_16370 PF00085 Thioredoxin HB368_16375 PF07497 Rho termination factor, RNA-binding domain HB368_16375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HB368_16375 PF07498 Rho termination factor, N-terminal domain HB368_16390 PF00216 Bacterial DNA-binding protein HB368_16395 PF03484 tRNA synthetase B5 domain HB368_16395 PF03483 B3/4 domain HB368_16395 PF01588 Putative tRNA binding domain HB368_16395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HB368_16395 PF03147 Ferredoxin-fold anticodon binding domain HB368_16400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HB368_16400 PF01409 tRNA synthetases class II core domain (F) HB368_16420 PF00453 Ribosomal protein L20 HB368_16425 PF01632 Ribosomal protein L35 HB368_16430 PF07690 Major Facilitator Superfamily HB368_16435 PF09335 SNARE associated Golgi protein HB368_16440 PF00043 Glutathione S-transferase, C-terminal domain HB368_16440 PF02798 Glutathione S-transferase, N-terminal domain HB368_16445 PF00707 Translation initiation factor IF-3, C-terminal domain HB368_16445 PF05198 Translation initiation factor IF-3, N-terminal domain HB368_16450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HB368_16450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HB368_16450 PF02824 TGS domain HB368_16450 PF03129 Anticodon binding domain HB368_16455 PF13193 AMP-binding enzyme C-terminal domain HB368_16455 PF00501 AMP-binding enzyme HB368_16460 PF04751 Protein of unknown function (DUF615) HB368_16465 PF00381 PTS HPr component phosphorylation site HB368_16470 PF03668 P-loop ATPase protein family HB368_16475 PF02569 Pantoate-beta-alanine ligase HB368_16480 PF02548 Ketopantoate hydroxymethyltransferase HB368_16485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HB368_16490 PF12627 Probable RNA and SrmB- binding site of polymerase A HB368_16490 PF12626 Polymerase A arginine-rich C-terminus HB368_16490 PF01743 Poly A polymerase head domain HB368_16500 PF03819 MazG nucleotide pyrophosphohydrolase domain HB368_16510 PF13291 ACT domain HB368_16510 PF02824 TGS domain HB368_16510 PF04607 Region found in RelA / SpoT proteins HB368_16515 PF05958 tRNA (Uracil-5-)-methyltransferase HB368_16525 PF00291 Pyridoxal-phosphate dependent enzyme HB368_16530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HB368_16530 PF00072 Response regulator receiver domain HB368_16530 PF01627 Hpt domain HB368_16530 PF00512 His Kinase A (phospho-acceptor) domain HB368_16530 PF00672 HAMP domain HB368_16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_16535 PF00378 Enoyl-CoA hydratase/isomerase HB368_16540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HB368_16540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HB368_16545 PF01261 Xylose isomerase-like TIM barrel HB368_16555 PF00106 short chain dehydrogenase HB368_16560 PF02233 NAD(P) transhydrogenase beta subunit HB368_16565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HB368_16570 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HB368_16570 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HB368_16575 PF00892 EamA-like transporter family HB368_16585 PF07690 Major Facilitator Superfamily HB368_16590 PF01207 Dihydrouridine synthase (Dus) HB368_16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_16600 PF03466 LysR substrate binding domain HB368_16610 PF00899 ThiF family HB368_16615 PF00330 Aconitase family (aconitate hydratase) HB368_16615 PF00694 Aconitase C-terminal domain HB368_16620 PF01026 TatD related DNase HB368_16635 PF03144 Elongation factor Tu domain 2 HB368_16635 PF16658 Class II release factor RF3, C-terminal domain HB368_16635 PF00009 Elongation factor Tu GTP binding domain HB368_16650 PF04151 Bacterial pre-peptidase C-terminal domain HB368_16660 PF16884 N-terminal domain of oxidoreductase HB368_16660 PF00107 Zinc-binding dehydrogenase HB368_16665 PF16925 Tetracyclin repressor-like, C-terminal domain HB368_16665 PF00440 Bacterial regulatory proteins, tetR family HB368_16675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HB368_16685 PF00465 Iron-containing alcohol dehydrogenase HB368_16700 PF00756 Putative esterase HB368_16705 PF00107 Zinc-binding dehydrogenase HB368_16705 PF08240 Alcohol dehydrogenase GroES-like domain HB368_16710 PF02583 Metal-sensitive transcriptional repressor HB368_16715 PF08240 Alcohol dehydrogenase GroES-like domain HB368_16715 PF02801 Beta-ketoacyl synthase, C-terminal domain HB368_16715 PF08659 KR domain HB368_16715 PF00698 Acyl transferase domain HB368_16715 PF00550 Phosphopantetheine attachment site HB368_16715 PF14765 Polyketide synthase dehydratase HB368_16715 PF00109 Beta-ketoacyl synthase, N-terminal domain HB368_16715 PF16197 Ketoacyl-synthetase C-terminal extension HB368_16720 PF00107 Zinc-binding dehydrogenase HB368_16720 PF08240 Alcohol dehydrogenase GroES-like domain HB368_16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_16725 PF03466 LysR substrate binding domain HB368_16730 PF00106 short chain dehydrogenase HB368_16735 PF08240 Alcohol dehydrogenase GroES-like domain HB368_16735 PF00107 Zinc-binding dehydrogenase HB368_16770 PF00665 Integrase core domain HB368_16770 PF13936 Helix-turn-helix domain HB368_16785 PF03707 Bacterial signalling protein N terminal repeat HB368_16785 PF00990 Diguanylate cyclase, GGDEF domain HB368_16785 PF00563 EAL domain HB368_16790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HB368_16790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HB368_16795 PF10369 Small subunit of acetolactate synthase HB368_16800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HB368_16800 PF00205 Thiamine pyrophosphate enzyme, central domain HB368_16800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HB368_16810 PF08264 Anticodon-binding domain of tRNA HB368_16810 PF00133 tRNA synthetases class I (I, L, M and V) HB368_16810 PF13603 Leucyl-tRNA synthetase, Domain 2 HB368_16810 PF09334 tRNA synthetases class I (M) HB368_16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HB368_16830 PF00005 ABC transporter HB368_16830 PF02687 FtsX-like permease family HB368_16830 PF12704 MacB-like periplasmic core domain HB368_16835 PF02321 Outer membrane efflux protein HB368_16850 PF00929 Exonuclease HB368_16855 PF03193 RsgA GTPase HB368_16865 PF00462 Glutaredoxin HB368_16870 PF02556 Preprotein translocase subunit SecB HB368_16880 PF01926 50S ribosome-binding GTPase HB368_16880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HB368_16885 PF13360 PQQ-like domain HB368_16895 PF13393 Histidyl-tRNA synthetase HB368_16895 PF03129 Anticodon binding domain HB368_16900 PF04551 GcpE protein HB368_16905 PF13464 Domain of unknown function (DUF4115) HB368_16915 PF04055 Radical SAM superfamily HB368_16920 PF00334 Nucleoside diphosphate kinase HB368_16925 PF04384 Iron-sulphur cluster assembly HB368_16930 PF01569 PAP2 superfamily HB368_16935 PF13439 Glycosyltransferase Family 4 HB368_16935 PF00534 Glycosyl transferases group 1 HB368_16940 PF03572 Peptidase family S41 HB368_16940 PF17804 Tail specific protease N-terminal domain HB368_16940 PF11818 C-terminal domain of tail specific protease (DUF3340) HB368_16940 PF00595 PDZ domain HB368_16945 PF00933 Glycosyl hydrolase family 3 N terminal domain HB368_16955 PF00561 alpha/beta hydrolase fold HB368_16960 PF00171 Aldehyde dehydrogenase family HB368_16965 PF00171 Aldehyde dehydrogenase family HB368_16970 PF01202 Shikimate kinase HB368_16975 PF02447 GntP family permease HB368_16980 PF01081 KDPG and KHG aldolase HB368_16985 PF00920 Dehydratase family HB368_16990 PF00871 Acetokinase family HB368_16995 PF01515 Phosphate acetyl/butaryl transferase HB368_16995 PF07085 DRTGG domain HB368_17000 PF05683 Fumarase C-terminus HB368_17000 PF05681 Fumarate hydratase (Fumerase) HB368_17015 PF10431 C-terminal, D2-small domain, of ClpB protein HB368_17015 PF07724 AAA domain (Cdc48 subfamily) HB368_17015 PF06689 ClpX C4-type zinc finger HB368_17020 PF00574 Clp protease HB368_17025 PF05697 Bacterial trigger factor protein (TF) HB368_17025 PF05698 Bacterial trigger factor protein (TF) C-terminus HB368_17025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB368_17030 PF00593 TonB dependent receptor HB368_17030 PF07715 TonB-dependent Receptor Plug Domain HB368_17035 PF18331 PKHD-type hydroxylase C-terminal domain HB368_17035 PF13640 2OG-Fe(II) oxygenase superfamily HB368_17040 PF00682 HMGL-like HB368_17040 PF08502 LeuA allosteric (dimerisation) domain HB368_17045 PF00561 alpha/beta hydrolase fold HB368_17050 PF00561 alpha/beta hydrolase fold HB368_17050 PF07021 Methionine biosynthesis protein MetW HB368_17065 PF01725 Ham1 family HB368_17075 PF02416 mttA/Hcf106 family HB368_17080 PF02416 mttA/Hcf106 family HB368_17085 PF00902 Sec-independent protein translocase protein (TatC) HB368_17105 PF01790 Prolipoprotein diacylglyceryl transferase HB368_17120 PF00303 Thymidylate synthase HB368_17125 PF00186 Dihydrofolate reductase HB368_17135 PF01625 Peptide methionine sulfoxide reductase HB368_17145 PF01618 MotA/TolQ/ExbB proton channel family HB368_17155 PF01842 ACT domain HB368_17155 PF00551 Formyl transferase HB368_17165 PF00171 Aldehyde dehydrogenase family HB368_17170 PF00830 Ribosomal L28 family HB368_17175 PF00471 Ribosomal protein L33 HB368_17180 PF02254 TrkA-N domain HB368_17180 PF00999 Sodium/hydrogen exchanger family HB368_17205 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HB368_17210 PF00580 UvrD/REP helicase N-terminal domain HB368_17210 PF13361 UvrD-like helicase C-terminal domain HB368_17225 PF01131 DNA topoisomerase HB368_17225 PF01396 Topoisomerase DNA binding C4 zinc finger HB368_17225 PF08272 Topoisomerase I zinc-ribbon-like HB368_17225 PF01751 Toprim domain HB368_17235 PF01638 HxlR-like helix-turn-helix HB368_17240 PF00107 Zinc-binding dehydrogenase HB368_17240 PF08240 Alcohol dehydrogenase GroES-like domain HB368_17245 PF04102 SlyX HB368_17255 PF01810 LysE type translocator HB368_17260 PF03279 Bacterial lipid A biosynthesis acyltransferase HB368_17270 PF00375 Sodium:dicarboxylate symporter family HB368_17280 PF02774 Semialdehyde dehydrogenase, dimerisation domain HB368_17280 PF01118 Semialdehyde dehydrogenase, NAD binding domain HB368_17300 PF01416 tRNA pseudouridine synthase HB368_17310 PF01176 Translation initiation factor 1A / IF-1 HB368_17325 PF00180 Isocitrate/isopropylmalate dehydrogenase HB368_17335 PF00694 Aconitase C-terminal domain HB368_17340 PF00330 Aconitase family (aconitate hydratase) HB368_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_17350 PF03466 LysR substrate binding domain HB368_17370 PF00293 NUDIX domain HB368_17375 PF01590 GAF domain HB368_17375 PF05524 PEP-utilising enzyme, N-terminal HB368_17375 PF00391 PEP-utilising enzyme, mobile domain HB368_17375 PF02896 PEP-utilising enzyme, TIM barrel domain HB368_17380 PF00141 Peroxidase HB368_17385 PF12706 Beta-lactamase superfamily domain HB368_17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_17390 PF03466 LysR substrate binding domain HB368_17400 PF02798 Glutathione S-transferase, N-terminal domain HB368_17405 PF08279 HTH domain HB368_17405 PF13280 WYL domain HB368_17410 PF13419 Haloacid dehalogenase-like hydrolase HB368_17415 PF00849 RNA pseudouridylate synthase HB368_17415 PF01479 S4 domain HB368_17425 PF00575 S1 RNA binding domain HB368_17425 PF10150 Ribonuclease E/G family HB368_17425 PF12111 Polyribonucleotide phosphorylase C terminal HB368_17430 PF00501 AMP-binding enzyme HB368_17430 PF13193 AMP-binding enzyme C-terminal domain HB368_17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HB368_17445 PF03466 LysR substrate binding domain HB368_17450 PF00106 short chain dehydrogenase HB368_17455 PF04055 Radical SAM superfamily HB368_17455 PF06969 HemN C-terminal domain HB368_17465 PF01554 MatE HB368_17470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_17470 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_17470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB368_17475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HB368_17475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_17480 PF03109 ABC1 family HB368_17485 PF01197 Ribosomal protein L31 HB368_17500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HB368_17520 PF03884 DNA gyrase inhibitor YacG HB368_17525 PF00753 Metallo-beta-lactamase superfamily HB368_17530 PF00762 Ferrochelatase HB368_17540 PF01177 Asp/Glu/Hydantoin racemase HB368_17560 PF01206 Sulfurtransferase TusA HB368_17565 PF00571 CBS domain HB368_17565 PF03471 Transporter associated domain HB368_17570 PF00795 Carbon-nitrogen hydrolase HB368_17575 PF01588 Putative tRNA binding domain HB368_17585 PF07963 Prokaryotic N-terminal methylation motif HB368_17585 PF08334 Type II secretion system (T2SS), protein G HB368_17590 PF00482 Type II secretion system (T2SS), protein F HB368_17595 PF00271 Helicase conserved C-terminal domain HB368_17595 PF18074 Primosomal protein N C-terminal domain HB368_17595 PF00270 DEAD/DEAH box helicase HB368_17595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HB368_17595 PF17764 3′ DNA-binding domain (3′BD) HB368_17600 PF02254 TrkA-N domain HB368_17600 PF00999 Sodium/hydrogen exchanger family HB368_17605 PF01430 Hsp33 protein HB368_17615 PF01556 DnaJ C terminal domain HB368_17615 PF00226 DnaJ domain HB368_17625 PF01544 CorA-like Mg2+ transporter protein HB368_17630 PF00013 KH domain HB368_17630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HB368_17630 PF00575 S1 RNA binding domain HB368_17630 PF03725 3' exoribonuclease family, domain 2 HB368_17630 PF01138 3' exoribonuclease family, domain 1 HB368_17635 PF00312 Ribosomal protein S15 HB368_17645 PF13538 UvrD-like helicase C-terminal domain HB368_17650 PF12705 PD-(D/E)XK nuclease superfamily HB368_17650 PF13361 UvrD-like helicase C-terminal domain HB368_17650 PF00580 UvrD/REP helicase N-terminal domain HB368_17655 PF17946 RecC C-terminal domain HB368_17665 PF03976 Polyphosphate kinase 2 (PPK2) HB368_17675 PF01209 ubiE/COQ5 methyltransferase family HB368_17685 PF03109 ABC1 family HB368_17690 PF01494 FAD binding domain HB368_17695 PF01502 Phosphoribosyl-AMP cyclohydrolase HB368_17710 PF13244 Domain of unknown function (DUF4040) HB368_17710 PF00361 Proton-conducting membrane transporter HB368_17710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HB368_17710 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HB368_17715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HB368_17720 PF00361 Proton-conducting membrane transporter HB368_17730 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HB368_17740 PF02033 Ribosome-binding factor A HB368_17745 PF04760 Translation initiation factor IF-2, N-terminal region HB368_17745 PF08364 Bacterial translation initiation factor IF-2 associated region HB368_17745 PF11987 Translation-initiation factor 2 HB368_17745 PF00009 Elongation factor Tu GTP binding domain HB368_17750 PF13184 NusA-like KH domain HB368_17750 PF08529 NusA N-terminal domain HB368_17750 PF00575 S1 RNA binding domain HB368_17755 PF02576 RimP N-terminal domain HB368_17755 PF17384 RimP C-terminal SH3 domain HB368_17775 PF03840 Preprotein translocase SecG subunit HB368_17780 PF00121 Triosephosphate isomerase HB368_17785 PF00437 Type II/IV secretion system protein HB368_17785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HB368_17790 PF00482 Type II secretion system (T2SS), protein F HB368_17795 PF06750 Bacterial Peptidase A24 N-terminal domain HB368_17795 PF01478 Type IV leader peptidase family HB368_17800 PF01121 Dephospho-CoA kinase HB368_17810 PF00588 SpoU rRNA Methylase family HB368_17810 PF08032 RNA 2'-O ribose methyltransferase substrate binding HB368_17815 PF06865 Pyrimidine/purine nucleoside phosphorylase HB368_17825 PF02463 RecF/RecN/SMC N terminal domain HB368_17830 PF02622 Uncharacterized ACR, COG1678 HB368_17835 PF03652 Holliday junction resolvase HB368_17840 PF13533 Biotin-lipoyl like HB368_17865 PF12833 Helix-turn-helix domain HB368_17865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HB368_17865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HB368_17865 PF02805 Metal binding domain of Ada HB368_17870 PF01066 CDP-alcohol phosphatidyltransferase HB368_17880 PF08459 UvrC Helix-hairpin-helix N-terminal HB368_17880 PF02151 UvrB/uvrC motif HB368_17880 PF01541 GIY-YIG catalytic domain HB368_17895 PF00378 Enoyl-CoA hydratase/isomerase HB368_17895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HB368_17895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HB368_17900 PF00108 Thiolase, N-terminal domain HB368_17900 PF02803 Thiolase, C-terminal domain HB368_17920 PF00376 MerR family regulatory protein HB368_17920 PF09278 MerR, DNA binding HB368_17930 PF01323 DSBA-like thioredoxin domain HB368_17945 PF00183 Hsp90 protein HB368_17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_17960 PF03553 Na+/H+ antiporter family HB368_17960 PF13726 Na+-H+ antiporter family HB368_17965 PF00561 alpha/beta hydrolase fold HB368_17980 PF00872 Transposase, Mutator family HB368_17990 PF04998 RNA polymerase Rpb1, domain 5 HB368_17990 PF05000 RNA polymerase Rpb1, domain 4 HB368_17990 PF04983 RNA polymerase Rpb1, domain 3 HB368_17990 PF04997 RNA polymerase Rpb1, domain 1 HB368_17990 PF00623 RNA polymerase Rpb1, domain 2 HB368_17995 PF04565 RNA polymerase Rpb2, domain 3 HB368_17995 PF04561 RNA polymerase Rpb2, domain 2 HB368_17995 PF00562 RNA polymerase Rpb2, domain 6 HB368_17995 PF04560 RNA polymerase Rpb2, domain 7 HB368_17995 PF10385 RNA polymerase beta subunit external 1 domain HB368_17995 PF04563 RNA polymerase beta subunit HB368_18000 PF00542 Ribosomal protein L7/L12 C-terminal domain HB368_18000 PF16320 Ribosomal protein L7/L12 dimerisation domain HB368_18005 PF00466 Ribosomal protein L10 HB368_18010 PF00687 Ribosomal protein L1p/L10e family HB368_18015 PF00298 Ribosomal protein L11, RNA binding domain HB368_18015 PF03946 Ribosomal protein L11, N-terminal domain HB368_18020 PF00467 KOW motif HB368_18020 PF02357 Transcription termination factor nusG HB368_18025 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HB368_18035 PF00009 Elongation factor Tu GTP binding domain HB368_18035 PF03144 Elongation factor Tu domain 2 HB368_18035 PF03143 Elongation factor Tu C-terminal domain HB368_18060 PF00425 chorismate binding enzyme HB368_18060 PF04715 Anthranilate synthase component I, N terminal region HB368_18065 PF13419 Haloacid dehalogenase-like hydrolase HB368_18070 PF12401 Protein of unknown function (DUF2662) HB368_18070 PF00498 FHA domain HB368_18075 PF00263 Bacterial type II and III secretion system protein HB368_18075 PF03958 Bacterial type II/III secretion system short domain HB368_18090 PF00816 H-NS histone family HB368_18115 PF03900 Porphobilinogen deaminase, C-terminal domain HB368_18115 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HB368_18120 PF00072 Response regulator receiver domain HB368_18120 PF04397 LytTr DNA-binding domain HB368_18125 PF07694 5TMR of 5TMR-LYT HB368_18125 PF06580 Histidine kinase HB368_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_18130 PF14698 Argininosuccinate lyase C-terminal HB368_18130 PF00206 Lyase HB368_18135 PF04362 Bacterial Fe(2+) trafficking HB368_18140 PF01895 PhoU domain HB368_18145 PF02321 Outer membrane efflux protein HB368_18150 PF00892 EamA-like transporter family HB368_18165 PF01964 Radical SAM ThiC family HB368_18165 PF13667 ThiC-associated domain HB368_18170 PF00293 NUDIX domain HB368_18175 PF00149 Calcineurin-like phosphoesterase HB368_18180 PF01258 Prokaryotic dksA/traR C4-type zinc finger HB368_18185 PF00749 tRNA synthetases class I (E and Q), catalytic domain HB368_18190 PF01098 Cell cycle protein HB368_18195 PF02875 Mur ligase family, glutamate ligase domain HB368_18195 PF08245 Mur ligase middle domain HB368_18205 PF02421 Ferrous iron transport protein B HB368_18205 PF07664 Ferrous iron transport protein B C terminus HB368_18205 PF07670 Nucleoside recognition HB368_18215 PF02899 Phage integrase, N-terminal SAM-like domain HB368_18215 PF00589 Phage integrase family HB368_18220 PF10411 Disulfide bond isomerase protein N-terminus HB368_18220 PF13098 Thioredoxin-like domain HB368_18225 PF01842 ACT domain HB368_18225 PF03447 Homoserine dehydrogenase, NAD binding domain HB368_18225 PF00742 Homoserine dehydrogenase HB368_18230 PF00291 Pyridoxal-phosphate dependent enzyme HB368_18235 PF00768 D-alanyl-D-alanine carboxypeptidase HB368_18240 PF00196 Bacterial regulatory proteins, luxR family HB368_18240 PF00072 Response regulator receiver domain HB368_18245 PF00512 His Kinase A (phospho-acceptor) domain HB368_18245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HB368_18250 PF00072 Response regulator receiver domain HB368_18250 PF02954 Bacterial regulatory protein, Fis family HB368_18250 PF00158 Sigma-54 interaction domain HB368_18255 PF00595 PDZ domain HB368_18255 PF03572 Peptidase family S41 HB368_18260 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HB368_18260 PF01676 Metalloenzyme superfamily HB368_18265 PF03739 Lipopolysaccharide export system permease LptF/LptG HB368_18275 PF02789 Cytosol aminopeptidase family, N-terminal domain HB368_18275 PF00883 Cytosol aminopeptidase family, catalytic domain HB368_18295 PF00677 Lumazine binding domain HB368_18305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HB368_18305 PF01872 RibD C-terminal domain HB368_18310 PF03477 ATP cone domain HB368_18315 PF00909 Ammonium Transporter Family HB368_18320 PF00543 Nitrogen regulatory protein P-II HB368_18330 PF13335 Magnesium chelatase, subunit ChlI C-terminal HB368_18330 PF01078 Magnesium chelatase, subunit ChlI HB368_18345 PF00905 Penicillin binding protein transpeptidase domain HB368_18370 PF00916 Sulfate permease family HB368_18370 PF01740 STAS domain HB368_18375 PF00582 Universal stress protein family HB368_18405 PF00665 Integrase core domain HB368_18415 PF01078 Magnesium chelatase, subunit ChlI HB368_18415 PF13335 Magnesium chelatase, subunit ChlI C-terminal HB368_18420 PF00155 Aminotransferase class I and II HB368_18420 PF00392 Bacterial regulatory proteins, gntR family HB368_18425 PF00596 Class II Aldolase and Adducin N-terminal domain HB368_18430 PF00701 Dihydrodipicolinate synthetase family HB368_18450 PF03573 outer membrane porin, OprD family HB368_18455 PF00719 Inorganic pyrophosphatase HB368_18470 PF00501 AMP-binding enzyme HB368_18470 PF13193 AMP-binding enzyme C-terminal domain HB368_18475 PF00521 DNA gyrase/topoisomerase IV, subunit A HB368_18475 PF03989 DNA gyrase C-terminal domain, beta-propeller HB368_18480 PF07690 Major Facilitator Superfamily HB368_18485 PF03458 UPF0126 domain HB368_18490 PF02810 SEC-C motif HB368_18495 PF03741 Integral membrane protein TerC family HB368_18495 PF03471 Transporter associated domain HB368_18500 PF03641 Possible lysine decarboxylase HB368_18505 PF07690 Major Facilitator Superfamily HB368_18515 PF11798 IMS family HHH motif HB368_18515 PF11799 impB/mucB/samB family C-terminal domain HB368_18515 PF00817 impB/mucB/samB family HB368_18530 PF11842 Domain of unknown function (DUF3362) HB368_18530 PF04055 Radical SAM superfamily HB368_18530 PF08497 Radical SAM N-terminal HB368_18550 PF03358 NADPH-dependent FMN reductase HB368_18560 PF00291 Pyridoxal-phosphate dependent enzyme HB368_18595 PF00440 Bacterial regulatory proteins, tetR family HB368_18620 PF01327 Polypeptide deformylase HB368_18630 PF02481 DNA recombination-mediator protein A HB368_18630 PF17782 DprA winged helix domain HB368_18635 PF01300 Telomere recombination HB368_18640 PF00892 EamA-like transporter family HB368_18645 PF00440 Bacterial regulatory proteins, tetR family HB368_18650 PF07690 Major Facilitator Superfamily HB368_18660 PF00255 Glutathione peroxidase HB368_18670 PF11008 Protein of unknown function (DUF2846) HB368_18675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HB368_18680 PF02874 ATP synthase alpha/beta family, beta-barrel domain HB368_18680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HB368_18685 PF00231 ATP synthase HB368_18690 PF02874 ATP synthase alpha/beta family, beta-barrel domain HB368_18690 PF00306 ATP synthase alpha/beta chain, C terminal domain HB368_18690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HB368_18695 PF00213 ATP synthase delta (OSCP) subunit HB368_18700 PF00430 ATP synthase B/B' CF(0) HB368_18705 PF00137 ATP synthase subunit C HB368_18710 PF00119 ATP synthase A chain HB368_18730 PF00005 ABC transporter HB368_18735 PF00950 ABC 3 transport family HB368_18740 PF01810 LysE type translocator HB368_18745 PF04261 Dyp-type peroxidase family HB368_18750 PF13737 Transposase DDE domain HB368_18755 PF00390 Malic enzyme, N-terminal domain HB368_18755 PF03949 Malic enzyme, NAD binding domain HB368_18760 PF03485 Arginyl tRNA synthetase N terminal domain HB368_18760 PF05746 DALR anticodon binding domain HB368_18760 PF00750 tRNA synthetases class I (R) HB368_18780 PF02678 Pirin HB368_18780 PF05726 Pirin C-terminal cupin domain HB368_18790 PF03551 Transcriptional regulator PadR-like family HB368_18795 PF13427 Domain of unknown function (DUF4111) HB368_18795 PF01909 Nucleotidyltransferase domain HB368_18800 PF00117 Glutamine amidotransferase class-I HB368_18800 PF02540 NAD synthase HB368_18800 PF00958 GMP synthase C terminal domain HB368_18805 PF04286 Protein of unknown function (DUF445) HB368_18810 PF07681 DoxX HB368_18815 PF09335 SNARE associated Golgi protein HB368_18830 PF13614 AAA domain HB368_18840 PF01722 BolA-like protein HB368_18860 PF00378 Enoyl-CoA hydratase/isomerase HB368_18865 PF00378 Enoyl-CoA hydratase/isomerase HB368_18870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HB368_18870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HB368_18870 PF02770 Acyl-CoA dehydrogenase, middle domain HB368_18875 PF00501 AMP-binding enzyme HB368_18875 PF13193 AMP-binding enzyme C-terminal domain HB368_18880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HB368_18880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HB368_18885 PF00171 Aldehyde dehydrogenase family HB368_18895 PF00324 Amino acid permease HB368_18900 PF00324 Amino acid permease HB368_18905 PF01042 Endoribonuclease L-PSP HB368_18910 PF00842 Alanine racemase, C-terminal domain HB368_18910 PF01168 Alanine racemase, N-terminal domain HB368_18915 PF01266 FAD dependent oxidoreductase HB368_18920 PF01037 Lrp/AsnC ligand binding domain HB368_18930 PF00593 TonB dependent receptor HB368_18930 PF07715 TonB-dependent Receptor Plug Domain HB368_18945 PF00849 RNA pseudouridylate synthase HB368_18960 PF02801 Beta-ketoacyl synthase, C-terminal domain HB368_18960 PF00109 Beta-ketoacyl synthase, N-terminal domain HB368_18980 PF00293 NUDIX domain HB368_19000 PF00694 Aconitase C-terminal domain HB368_19000 PF00330 Aconitase family (aconitate hydratase) HB368_19005 PF00285 Citrate synthase, C-terminal domain HB368_19015 PF00392 Bacterial regulatory proteins, gntR family HB368_19015 PF07729 FCD domain HB368_19025 PF00155 Aminotransferase class I and II HB368_19030 PF01565 FAD binding domain HB368_19030 PF09330 D-lactate dehydrogenase, membrane binding HB368_19035 PF01070 FMN-dependent dehydrogenase HB368_19040 PF07729 FCD domain HB368_19040 PF00392 Bacterial regulatory proteins, gntR family HB368_19045 PF02652 L-lactate permease HB368_19050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB368_19050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB368_19050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB368_19050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB368_19055 PF16363 GDP-mannose 4,6 dehydratase HB368_19060 PF00342 Phosphoglucose isomerase HB368_19065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HB368_19065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HB368_19065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HB368_19070 PF00483 Nucleotidyl transferase HB368_19075 PF02397 Bacterial sugar transferase HB368_19080 PF00953 Glycosyl transferase family 4 HB368_19085 PF01370 NAD dependent epimerase/dehydratase family HB368_19090 PF13579 Glycosyl transferase 4-like domain HB368_19095 PF02350 UDP-N-acetylglucosamine 2-epimerase HB368_19100 PF01370 NAD dependent epimerase/dehydratase family HB368_19105 PF08485 Polysaccharide biosynthesis protein C-terminal HB368_19105 PF02719 Polysaccharide biosynthesis protein HB368_19130 PF01370 NAD dependent epimerase/dehydratase family HB368_19135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HB368_19135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HB368_19135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HB368_19140 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HB368_19140 PF02563 Polysaccharide biosynthesis/export protein HB368_19140 PF10531 SLBB domain HB368_19145 PF01451 Low molecular weight phosphotyrosine protein phosphatase HB368_19150 PF02706 Chain length determinant protein HB368_19150 PF13807 G-rich domain on putative tyrosine kinase HB368_19150 PF13614 AAA domain HB368_19155 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HB368_19155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB368_19160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB368_19160 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HB368_19165 PF03023 Lipid II flippase MurJ HB368_19170 PF01510 N-acetylmuramoyl-L-alanine amidase HB368_19175 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HB368_19175 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HB368_19185 PF04185 Phosphoesterase family HB368_19185 PF05506 Domain of unknown function (DUF756) HB368_19195 PF03725 3' exoribonuclease family, domain 2 HB368_19195 PF01138 3' exoribonuclease family, domain 1 HB368_19200 PF00487 Fatty acid desaturase HB368_19205 PF00175 Oxidoreductase NAD-binding domain HB368_19210 PF00440 Bacterial regulatory proteins, tetR family HB368_19215 PF08360 QacR-like protein, C-terminal region HB368_19215 PF00440 Bacterial regulatory proteins, tetR family HB368_19220 PF01323 DSBA-like thioredoxin domain HB368_19230 PF13419 Haloacid dehalogenase-like hydrolase HB368_19235 PF00106 short chain dehydrogenase HB368_19250 PF00583 Acetyltransferase (GNAT) family HB368_19250 PF00696 Amino acid kinase family HB368_19255 PF09084 NMT1/THI5 like HB368_19260 PF09084 NMT1/THI5 like HB368_19265 PF00296 Luciferase-like monooxygenase HB368_19270 PF00528 Binding-protein-dependent transport system inner membrane component HB368_19275 PF00005 ABC transporter HB368_19280 PF00440 Bacterial regulatory proteins, tetR family HB368_19280 PF08362 YcdC-like protein, C-terminal region HB368_19285 PF01048 Phosphorylase superfamily HB368_19295 PF01687 Riboflavin kinase HB368_19295 PF06574 FAD synthetase HB368_19300 PF08264 Anticodon-binding domain of tRNA HB368_19300 PF06827 Zinc finger found in FPG and IleRS HB368_19300 PF00133 tRNA synthetases class I (I, L, M and V) HB368_19305 PF01252 Signal peptidase (SPase) II HB368_19310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HB368_19350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HB368_19355 PF07859 alpha/beta hydrolase fold HB368_19380 PF01025 GrpE HB368_19385 PF00012 Hsp70 protein HB368_19405 PF13406 Transglycosylase SLT domain HB368_19410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HB368_19410 PF02222 ATP-grasp domain HB368_19415 PF00731 AIR carboxylase HB368_19425 PF02875 Mur ligase family, glutamate ligase domain HB368_19425 PF08245 Mur ligase middle domain HB368_19425 PF01225 Mur ligase family, catalytic domain HB368_19435 PF00872 Transposase, Mutator family HB368_19445 PF01569 PAP2 superfamily HB368_19450 PF03741 Integral membrane protein TerC family HB368_19460 PF03738 Glutathionylspermidine synthase preATP-grasp HB368_19465 PF00355 Rieske [2Fe-2S] domain HB368_19470 PF01979 Amidohydrolase family HB368_19475 PF00156 Phosphoribosyl transferase domain HB368_19485 PF13098 Thioredoxin-like domain HB368_19485 PF10411 Disulfide bond isomerase protein N-terminus HB368_19490 PF16916 Dimerisation domain of Zinc Transporter HB368_19490 PF01545 Cation efflux family HB368_19495 PF02583 Metal-sensitive transcriptional repressor HB368_19500 PF10396 GTP-binding protein TrmE N-terminus HB368_19500 PF01926 50S ribosome-binding GTPase HB368_19500 PF12631 MnmE helical domain HB368_19505 PF02096 60Kd inner membrane protein HB368_19505 PF14849 YidC periplasmic domain HB368_19510 PF01809 Putative membrane protein insertion efficiency factor HB368_19515 PF00825 Ribonuclease P HB368_19520 PF00468 Ribosomal protein L34 HB368_19540 PF01636 Phosphotransferase enzyme family HB368_19565 PF07091 Ribosomal RNA methyltransferase (FmrO) HB368_19585 PF00809 Pterin binding enzyme HB368_19590 PF00893 Small Multidrug Resistance protein HB368_19595 PF07690 Major Facilitator Superfamily HB368_19605 PF00589 Phage integrase family HB368_19605 PF13495 Phage integrase, N-terminal SAM-like domain HB368_19610 PF13610 DDE domain HB368_19680 PF02195 ParB-like nuclease domain HB368_19680 PF08535 KorB domain HB368_19680 PF06613 KorB C-terminal beta-barrel domain HB368_19685 PF13614 AAA domain HB368_19705 PF00809 Pterin binding enzyme HB368_19710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB368_19710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB368_19710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB368_19710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB368_19730 PF00186 Dihydrofolate reductase HB368_19735 PF00303 Thymidylate synthase HB368_19760 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase HB368_19765 PF01636 Phosphotransferase enzyme family HB368_19780 PF01396 Topoisomerase DNA binding C4 zinc finger HB368_19780 PF01751 Toprim domain HB368_19780 PF01131 DNA topoisomerase HB368_19830 PF00665 Integrase core domain HB368_19830 PF13936 Helix-turn-helix domain HB368_19845 PF00118 TCP-1/cpn60 chaperonin family HB368_19850 PF00166 Chaperonin 10 Kd subunit HB368_19855 PF03091 CutA1 divalent ion tolerance protein HB368_19860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HB368_19865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HB368_19875 PF00753 Metallo-beta-lactamase superfamily HB368_19880 PF13936 Helix-turn-helix domain HB368_19880 PF00665 Integrase core domain HB368_19900 PF13610 DDE domain HB368_19920 PF00437 Type II/IV secretion system protein HB368_19920 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HB368_19970 PF13614 AAA domain HB368_19975 PF02195 ParB-like nuclease domain HB368_19975 PF17762 HTH domain found in ParB protein HB368_19980 PF13438 Domain of unknown function (DUF4113) HB368_19980 PF00817 impB/mucB/samB family HB368_19980 PF11798 IMS family HHH motif HB368_19980 PF11799 impB/mucB/samB family C-terminal domain HB368_19985 PF00717 Peptidase S24-like HB368_20025 PF04225 Opacity-associated protein A LysM-like domain HB368_20025 PF01551 Peptidase family M23 HB368_20250 PF01435 Peptidase family M48 HB368_20285 PF02899 Phage integrase, N-terminal SAM-like domain HB368_20285 PF00589 Phage integrase family HB368_20310 PF00665 Integrase core domain HB368_20330 PF00809 Pterin binding enzyme HB368_20335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HB368_20335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HB368_20335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HB368_20335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HB368_20345 PF07690 Major Facilitator Superfamily HB368_20350 PF00440 Bacterial regulatory proteins, tetR family HB368_20350 PF02909 Tetracyclin repressor-like, C-terminal domain HB368_20375 PF00239 Resolvase, N terminal domain HB368_20375 PF02796 Helix-turn-helix domain of resolvase HB368_20385 PF01051 Initiator Replication protein HB368_20415 PF07715 TonB-dependent Receptor Plug Domain HB368_20415 PF00593 TonB dependent receptor HB368_20435 PF02796 Helix-turn-helix domain of resolvase HB368_20435 PF00239 Resolvase, N terminal domain HB368_20440 PF01126 Heme oxygenase HB368_20445 PF00593 TonB dependent receptor HB368_20445 PF07715 TonB-dependent Receptor Plug Domain HB368_20450 PF04304 Protein of unknown function (DUF454) HB368_20475 PF00313 'Cold-shock' DNA-binding domain HB368_20490 PF01051 Initiator Replication protein HB368_20510 PF04221 RelB antitoxin HB368_20565 PF05973 Phage derived protein Gp49-like (DUF891)