locus-tag class description IUJ44_00015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IUJ44_00015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IUJ44_00020 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_00020 PF01799 [2Fe-2S] binding domain IUJ44_00025 PF01227 GTP cyclohydrolase I IUJ44_00030 PF00144 Beta-lactamase IUJ44_00045 PF05675 Protein of unknown function (DUF817) IUJ44_00050 PF01208 Uroporphyrinogen decarboxylase (URO-D) IUJ44_00060 PF00425 chorismate binding enzyme IUJ44_00070 PF00975 Thioesterase domain IUJ44_00075 PF00005 ABC transporter IUJ44_00080 PF00664 ABC transporter transmembrane region IUJ44_00080 PF00005 ABC transporter IUJ44_00085 PF00282 Pyridoxal-dependent decarboxylase conserved domain IUJ44_00090 PF00550 Phosphopantetheine attachment site IUJ44_00090 PF00857 Isochorismatase family IUJ44_00095 PF00501 AMP-binding enzyme IUJ44_00095 PF13193 AMP-binding enzyme C-terminal domain IUJ44_00100 PF00501 AMP-binding enzyme IUJ44_00100 PF00668 Condensation domain IUJ44_00100 PF00550 Phosphopantetheine attachment site IUJ44_00105 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IUJ44_00110 PF07715 TonB-dependent Receptor Plug Domain IUJ44_00110 PF00593 TonB dependent receptor IUJ44_00115 PF01497 Periplasmic binding protein IUJ44_00120 PF00005 ABC transporter IUJ44_00125 PF01032 FecCD transport family IUJ44_00130 PF01032 FecCD transport family IUJ44_00135 PF00550 Phosphopantetheine attachment site IUJ44_00135 PF00975 Thioesterase domain IUJ44_00135 PF00668 Condensation domain IUJ44_00135 PF13193 AMP-binding enzyme C-terminal domain IUJ44_00135 PF00501 AMP-binding enzyme IUJ44_00140 PF00668 Condensation domain IUJ44_00140 PF00550 Phosphopantetheine attachment site IUJ44_00140 PF13193 AMP-binding enzyme C-terminal domain IUJ44_00140 PF00501 AMP-binding enzyme IUJ44_00150 PF08348 YheO-like PAS domain IUJ44_00150 PF13309 HTH domain IUJ44_00155 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_00160 PF02678 Pirin IUJ44_00160 PF17954 Quercetinase C-terminal cupin domain IUJ44_00190 PF04328 Selenoprotein, putative IUJ44_00195 PF13722 5TM C-terminal transporter carbon starvation CstA IUJ44_00195 PF02554 Carbon starvation protein CstA IUJ44_00200 PF08207 Elongation factor P (EF-P) KOW-like domain IUJ44_00200 PF09285 Elongation factor P, C-terminal IUJ44_00200 PF01132 Elongation factor P (EF-P) OB domain IUJ44_00205 PF04055 Radical SAM superfamily IUJ44_00215 PF12792 CSS motif domain associated with EAL IUJ44_00215 PF00563 EAL domain IUJ44_00220 PF01197 Ribosomal protein L31 IUJ44_00225 PF13593 SBF-like CPA transporter family (DUF4137) IUJ44_00230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUJ44_00235 PF07690 Major Facilitator Superfamily IUJ44_00240 PF05362 Lon protease (S16) C-terminal proteolytic domain IUJ44_00240 PF13654 AAA domain IUJ44_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_00245 PF03466 LysR substrate binding domain IUJ44_00250 PF01476 LysM domain IUJ44_00250 PF01551 Peptidase family M23 IUJ44_00255 PF01975 Survival protein SurE IUJ44_00270 PF07943 Penicillin-binding protein 5, C-terminal domain IUJ44_00270 PF00768 D-alanyl-D-alanine carboxypeptidase IUJ44_00275 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_00280 PF00293 NUDIX domain IUJ44_00280 PF13344 Haloacid dehalogenase-like hydrolase IUJ44_00290 PF04356 Protein of unknown function (DUF489) IUJ44_00295 PF00206 Lyase IUJ44_00295 PF08328 Adenylosuccinate lyase C-terminal IUJ44_00310 PF08496 Peptidase family S49 N-terminal IUJ44_00310 PF01343 Peptidase family S49 IUJ44_00315 PF00005 ABC transporter IUJ44_00320 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_00325 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_00330 PF12849 PBP superfamily domain IUJ44_00335 PF00324 Amino acid permease IUJ44_00340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUJ44_00340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUJ44_00340 PF00205 Thiamine pyrophosphate enzyme, central domain IUJ44_00345 PF01037 Lrp/AsnC ligand binding domain IUJ44_00350 PF00171 Aldehyde dehydrogenase family IUJ44_00355 PF00282 Pyridoxal-dependent decarboxylase conserved domain IUJ44_00360 PF00202 Aminotransferase class-III IUJ44_00375 PF02525 Flavodoxin-like fold IUJ44_00380 PF00487 Fatty acid desaturase IUJ44_00385 PF00970 Oxidoreductase FAD-binding domain IUJ44_00385 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_00385 PF00175 Oxidoreductase NAD-binding domain IUJ44_00390 PF00440 Bacterial regulatory proteins, tetR family IUJ44_00400 PF18339 RapA N-terminal Tudor like domain 1 IUJ44_00400 PF00176 SNF2 family N-terminal domain IUJ44_00400 PF12137 RNA polymerase recycling family C-terminal IUJ44_00400 PF00271 Helicase conserved C-terminal domain IUJ44_00400 PF18337 RapA N-terminal Tudor like domain IUJ44_00405 PF00849 RNA pseudouridylate synthase IUJ44_00415 PF00202 Aminotransferase class-III IUJ44_00420 PF02581 Thiamine monophosphate synthase IUJ44_00445 PF05193 Peptidase M16 inactive domain IUJ44_00445 PF00675 Insulinase (Peptidase family M16) IUJ44_00450 PF02567 Phenazine biosynthesis-like protein IUJ44_00455 PF00375 Sodium:dicarboxylate symporter family IUJ44_00460 PF03466 LysR substrate binding domain IUJ44_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_00465 PF06779 Uncharacterised MFS-type transporter YbfB IUJ44_00485 PF00180 Isocitrate/isopropylmalate dehydrogenase IUJ44_00490 PF00849 RNA pseudouridylate synthase IUJ44_00495 PF03971 Monomeric isocitrate dehydrogenase IUJ44_00505 PF07943 Penicillin-binding protein 5, C-terminal domain IUJ44_00505 PF00768 D-alanyl-D-alanine carboxypeptidase IUJ44_00510 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_00515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUJ44_00520 PF03441 FAD binding domain of DNA photolyase IUJ44_00520 PF00875 DNA photolyase IUJ44_00550 PF02350 UDP-N-acetylglucosamine 2-epimerase IUJ44_00565 PF03060 Nitronate monooxygenase IUJ44_00570 PF01207 Dihydrouridine synthase (Dus) IUJ44_00575 PF07759 Protein of unknown function (DUF1615) IUJ44_00585 PF00696 Amino acid kinase family IUJ44_00585 PF01472 PUA domain IUJ44_00590 PF01926 50S ribosome-binding GTPase IUJ44_00590 PF01018 GTP1/OBG IUJ44_00605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IUJ44_00605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IUJ44_00610 PF00892 EamA-like transporter family IUJ44_00620 PF00271 Helicase conserved C-terminal domain IUJ44_00620 PF02151 UvrB/uvrC motif IUJ44_00620 PF12344 Ultra-violet resistance protein B IUJ44_00620 PF17757 UvrB interaction domain IUJ44_00620 PF04851 Type III restriction enzyme, res subunit IUJ44_00630 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_00630 PF17151 Periplasmic sensor domain IUJ44_00640 PF00155 Aminotransferase class I and II IUJ44_00650 PF00012 Hsp70 protein IUJ44_00680 PF00106 short chain dehydrogenase IUJ44_00685 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IUJ44_00690 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IUJ44_00695 PF02565 Recombination protein O C terminal IUJ44_00695 PF11967 Recombination protein O N terminal IUJ44_00705 PF01926 50S ribosome-binding GTPase IUJ44_00705 PF07650 KH domain IUJ44_00710 PF14622 Ribonuclease-III-like IUJ44_00710 PF00035 Double-stranded RNA binding motif IUJ44_00720 PF10502 Signal peptidase, peptidase S26 IUJ44_00725 PF00009 Elongation factor Tu GTP binding domain IUJ44_00725 PF06421 GTP-binding protein LepA C-terminus IUJ44_00725 PF00679 Elongation factor G C-terminus IUJ44_00725 PF03144 Elongation factor Tu domain 2 IUJ44_00735 PF13180 PDZ domain IUJ44_00740 PF00890 FAD binding domain IUJ44_00740 PF02910 Fumarate reductase flavoprotein C-term IUJ44_00750 PF02223 Thymidylate kinase IUJ44_00755 PF02618 YceG-like family IUJ44_00760 PF01063 Amino-transferase class IV IUJ44_00775 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_00780 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_00785 PF12857 TOBE-like domain IUJ44_00785 PF00005 ABC transporter IUJ44_00790 PF03466 LysR substrate binding domain IUJ44_00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_00800 PF14602 Hexapeptide repeat of succinyl-transferase IUJ44_00800 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IUJ44_00800 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_00810 PF06508 Queuosine biosynthesis protein QueC IUJ44_00825 PF00578 AhpC/TSA family IUJ44_00835 PF01467 Cytidylyltransferase-like IUJ44_00835 PF00293 NUDIX domain IUJ44_00840 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_00845 PF01784 NIF3 (NGG1p interacting factor 3) IUJ44_00850 PF07690 Major Facilitator Superfamily IUJ44_00855 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IUJ44_00855 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IUJ44_00855 PF02769 AIR synthase related protein, C-terminal domain IUJ44_00860 PF01966 HD domain IUJ44_00865 PF01330 RuvA N terminal domain IUJ44_00865 PF07499 RuvA, C-terminal domain IUJ44_00870 PF05491 RuvB C-terminal winged helix domain IUJ44_00870 PF17864 RuvB AAA lid domain IUJ44_00870 PF05496 Holliday junction DNA helicase RuvB P-loop domain IUJ44_00875 PF07687 Peptidase dimerisation domain IUJ44_00875 PF01546 Peptidase family M20/M25/M40 IUJ44_00880 PF03061 Thioesterase superfamily IUJ44_00885 PF01618 MotA/TolQ/ExbB proton channel family IUJ44_00890 PF02472 Biopolymer transport protein ExbD/TolR IUJ44_00900 PF04052 TolB amino-terminal domain IUJ44_00900 PF07676 WD40-like Beta Propeller Repeat IUJ44_00905 PF00691 OmpA family IUJ44_00915 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IUJ44_00920 PF08032 RNA 2'-O ribose methyltransferase substrate binding IUJ44_00920 PF00588 SpoU rRNA Methylase family IUJ44_00950 PF11638 DnaA N-terminal domain IUJ44_00950 PF08299 Bacterial dnaA protein helix-turn-helix IUJ44_00950 PF00308 Bacterial dnaA protein IUJ44_00955 PF01594 AI-2E family transporter IUJ44_00960 PF00586 AIR synthase related protein, N-terminal domain IUJ44_00960 PF02769 AIR synthase related protein, C-terminal domain IUJ44_00965 PF00551 Formyl transferase IUJ44_00970 PF12697 Alpha/beta hydrolase family IUJ44_00975 PF01343 Peptidase family S49 IUJ44_00975 PF06965 Na+/H+ antiporter 1 IUJ44_00985 PF13567 Domain of unknown function (DUF4131) IUJ44_00985 PF00753 Metallo-beta-lactamase superfamily IUJ44_00985 PF03772 Competence protein IUJ44_00990 PF00005 ABC transporter IUJ44_00995 PF02687 FtsX-like permease family IUJ44_00995 PF12704 MacB-like periplasmic core domain IUJ44_01005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IUJ44_01020 PF00266 Aminotransferase class-V IUJ44_01030 PF13533 Biotin-lipoyl like IUJ44_01050 PF00535 Glycosyl transferase family 2 IUJ44_01065 PF03989 DNA gyrase C-terminal domain, beta-propeller IUJ44_01065 PF00521 DNA gyrase/topoisomerase IV, subunit A IUJ44_01070 PF01012 Electron transfer flavoprotein domain IUJ44_01070 PF00766 Electron transfer flavoprotein FAD-binding domain IUJ44_01075 PF01012 Electron transfer flavoprotein domain IUJ44_01080 PF02899 Phage integrase, N-terminal SAM-like domain IUJ44_01080 PF00589 Phage integrase family IUJ44_01085 PF01810 LysE type translocator IUJ44_01090 PF00561 alpha/beta hydrolase fold IUJ44_01095 PF03747 ADP-ribosylglycohydrolase IUJ44_01100 PF01678 Diaminopimelate epimerase IUJ44_01105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IUJ44_01105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IUJ44_01115 PF00324 Amino acid permease IUJ44_01120 PF18073 Rubredoxin metal binding domain IUJ44_01130 PF00152 tRNA synthetases class II (D, K and N) IUJ44_01135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUJ44_01135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUJ44_01135 PF11890 Domain of unknown function (DUF3410) IUJ44_01140 PF06803 Protein of unknown function (DUF1232) IUJ44_01145 PF02634 FdhD/NarQ family IUJ44_01150 PF00384 Molybdopterin oxidoreductase IUJ44_01155 PF02595 Glycerate kinase family IUJ44_01170 PF00881 Nitroreductase family IUJ44_01195 PF00975 Thioesterase domain IUJ44_01195 PF00668 Condensation domain IUJ44_01195 PF13193 AMP-binding enzyme C-terminal domain IUJ44_01195 PF00501 AMP-binding enzyme IUJ44_01195 PF00550 Phosphopantetheine attachment site IUJ44_01210 PF03449 Transcription elongation factor, N-terminal IUJ44_01210 PF01272 Transcription elongation factor, GreA/GreB, C-term IUJ44_01215 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUJ44_01215 PF01464 Transglycosylase SLT domain IUJ44_01225 PF01171 PP-loop family IUJ44_01230 PF01464 Transglycosylase SLT domain IUJ44_01235 PF01435 Peptidase family M48 IUJ44_01245 PF00873 AcrB/AcrD/AcrF family IUJ44_01250 PF03009 Glycerophosphoryl diester phosphodiesterase family IUJ44_01255 PF00753 Metallo-beta-lactamase superfamily IUJ44_01260 PF01219 Prokaryotic diacylglycerol kinase IUJ44_01265 PF00118 TCP-1/cpn60 chaperonin family IUJ44_01270 PF00166 Chaperonin 10 Kd subunit IUJ44_01280 PF00149 Calcineurin-like phosphoesterase IUJ44_01285 PF00781 Diacylglycerol kinase catalytic domain IUJ44_01290 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IUJ44_01290 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IUJ44_01295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IUJ44_01295 PF01266 FAD dependent oxidoreductase IUJ44_01300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IUJ44_01300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IUJ44_01305 PF00083 Sugar (and other) transporter IUJ44_01320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IUJ44_01320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IUJ44_01335 PF16655 PhoD-like phosphatase, N-terminal domain IUJ44_01335 PF09423 PhoD-like phosphatase IUJ44_01355 PF00809 Pterin binding enzyme IUJ44_01360 PF17862 AAA+ lid domain IUJ44_01360 PF00004 ATPase family associated with various cellular activities (AAA) IUJ44_01360 PF06480 FtsH Extracellular IUJ44_01360 PF01434 Peptidase family M41 IUJ44_01365 PF01728 FtsJ-like methyltransferase IUJ44_01370 PF01985 CRS1 / YhbY (CRM) domain IUJ44_01385 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IUJ44_01385 PF00117 Glutamine amidotransferase class-I IUJ44_01390 PF02142 MGS-like domain IUJ44_01390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IUJ44_01390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUJ44_01395 PF03449 Transcription elongation factor, N-terminal IUJ44_01395 PF01272 Transcription elongation factor, GreA/GreB, C-term IUJ44_01400 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_01405 PF00582 Universal stress protein family IUJ44_01410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IUJ44_01420 PF09587 Bacterial capsule synthesis protein PGA_cap IUJ44_01435 PF00999 Sodium/hydrogen exchanger family IUJ44_01440 PF04228 Putative neutral zinc metallopeptidase IUJ44_01445 PF05661 Protein of unknown function (DUF808) IUJ44_01450 PF00579 tRNA synthetases class I (W and Y) IUJ44_01455 PF00549 CoA-ligase IUJ44_01455 PF02629 CoA binding domain IUJ44_01460 PF00549 CoA-ligase IUJ44_01460 PF08442 ATP-grasp domain IUJ44_01465 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_01465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUJ44_01470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUJ44_01470 PF00364 Biotin-requiring enzyme IUJ44_01470 PF02817 e3 binding domain IUJ44_01475 PF16870 2-oxoglutarate dehydrogenase C-terminal IUJ44_01475 PF02779 Transketolase, pyrimidine binding domain IUJ44_01475 PF00676 Dehydrogenase E1 component IUJ44_01475 PF16078 2-oxoglutarate dehydrogenase N-terminus IUJ44_01490 PF13085 2Fe-2S iron-sulfur cluster binding domain IUJ44_01495 PF02910 Fumarate reductase flavoprotein C-term IUJ44_01495 PF00890 FAD binding domain IUJ44_01500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IUJ44_01505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IUJ44_01510 PF00285 Citrate synthase, C-terminal domain IUJ44_01520 PF17773 UPF0176 acylphosphatase like domain IUJ44_01520 PF00581 Rhodanese-like domain IUJ44_01535 PF04546 Sigma-70, non-essential region IUJ44_01535 PF03979 Sigma-70 factor, region 1.1 IUJ44_01535 PF04542 Sigma-70 region 2 IUJ44_01535 PF04545 Sigma-70, region 4 IUJ44_01535 PF04539 Sigma-70 region 3 IUJ44_01535 PF00140 Sigma-70 factor, region 1.2 IUJ44_01540 PF04359 Protein of unknown function (DUF493) IUJ44_01545 PF03099 Biotin/lipoate A/B protein ligase family IUJ44_01555 PF00465 Iron-containing alcohol dehydrogenase IUJ44_01560 PF13520 Amino acid permease IUJ44_01565 PF03358 NADPH-dependent FMN reductase IUJ44_01575 PF00588 SpoU rRNA Methylase family IUJ44_01580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUJ44_01580 PF10414 Sirohaem synthase dimerisation region IUJ44_01580 PF14824 Sirohaem biosynthesis protein central IUJ44_01585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUJ44_01585 PF02403 Seryl-tRNA synthetase N-terminal domain IUJ44_01595 PF03548 Outer membrane lipoprotein carrier protein LolA IUJ44_01600 PF01016 Ribosomal L27 protein IUJ44_01605 PF00829 Ribosomal prokaryotic L21 protein IUJ44_01615 PF00348 Polyprenyl synthetase IUJ44_01625 PF01569 PAP2 superfamily IUJ44_01630 PF00529 HlyD membrane-fusion protein of T1SS IUJ44_01630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_01635 PF00873 AcrB/AcrD/AcrF family IUJ44_01640 PF02321 Outer membrane efflux protein IUJ44_01645 PF01906 Putative heavy-metal-binding IUJ44_01650 PF01906 Putative heavy-metal-binding IUJ44_01670 PF08264 Anticodon-binding domain of tRNA IUJ44_01670 PF10458 Valyl tRNA synthetase tRNA binding arm IUJ44_01670 PF00133 tRNA synthetases class I (I, L, M and V) IUJ44_01690 PF03466 LysR substrate binding domain IUJ44_01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_01695 PF00909 Ammonium Transporter Family IUJ44_01710 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_01710 PF08521 Two-component sensor kinase N-terminal IUJ44_01715 PF00486 Transcriptional regulatory protein, C terminal IUJ44_01715 PF00072 Response regulator receiver domain IUJ44_01720 PF00884 Sulfatase IUJ44_01720 PF08019 Phosphoethanolamine transferase EptA/EptB IUJ44_01740 PF01734 Patatin-like phospholipase IUJ44_01750 PF01145 SPFH domain / Band 7 family IUJ44_01755 PF04237 YjbR IUJ44_01760 PF00348 Polyprenyl synthetase IUJ44_01765 PF04303 PrpF protein IUJ44_01770 PF00324 Amino acid permease IUJ44_01780 PF01965 DJ-1/PfpI family IUJ44_01785 PF08659 KR domain IUJ44_01785 PF08990 Erythronolide synthase docking IUJ44_01785 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_01785 PF14765 Polyketide synthase dehydratase IUJ44_01785 PF00550 Phosphopantetheine attachment site IUJ44_01785 PF00698 Acyl transferase domain IUJ44_01785 PF00109 Beta-ketoacyl synthase, N-terminal domain IUJ44_01785 PF16197 Ketoacyl-synthetase C-terminal extension IUJ44_01785 PF09277 Erythronolide synthase, docking IUJ44_01785 PF02801 Beta-ketoacyl synthase, C-terminal domain IUJ44_01790 PF06719 AraC-type transcriptional regulator N-terminus IUJ44_01790 PF12833 Helix-turn-helix domain IUJ44_01795 PF02673 Bacitracin resistance protein BacA IUJ44_01815 PF02525 Flavodoxin-like fold IUJ44_01830 PF01507 Phosphoadenosine phosphosulfate reductase family IUJ44_01835 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IUJ44_01835 PF06974 Protein of unknown function (DUF1298) IUJ44_01845 PF10150 Ribonuclease E/G family IUJ44_01845 PF00575 S1 RNA binding domain IUJ44_01850 PF02545 Maf-like protein IUJ44_01855 PF04093 rod shape-determining protein MreD IUJ44_01860 PF04085 rod shape-determining protein MreC IUJ44_01870 PF02686 Glu-tRNAGln amidotransferase C subunit IUJ44_01875 PF01425 Amidase IUJ44_01880 PF02637 GatB domain IUJ44_01880 PF02934 GatB/GatE catalytic domain IUJ44_01905 PF05992 SbmA/BacA-like family IUJ44_01910 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_01910 PF13291 ACT domain IUJ44_01915 PF01734 Patatin-like phospholipase IUJ44_01920 PF01235 Sodium:alanine symporter family IUJ44_01935 PF00881 Nitroreductase family IUJ44_01940 PF07690 Major Facilitator Superfamily IUJ44_01945 PF12805 FUSC-like inner membrane protein yccS IUJ44_01955 PF00258 Flavodoxin IUJ44_01955 PF00175 Oxidoreductase NAD-binding domain IUJ44_01955 PF00667 FAD binding domain IUJ44_01995 PF17969 L,D-transpeptidase C-terminal domain IUJ44_01995 PF03734 L,D-transpeptidase catalytic domain IUJ44_02000 PF04304 Protein of unknown function (DUF454) IUJ44_02010 PF08085 Entericidin EcnA/B family IUJ44_02015 PF07687 Peptidase dimerisation domain IUJ44_02015 PF01546 Peptidase family M20/M25/M40 IUJ44_02025 PF00072 Response regulator receiver domain IUJ44_02025 PF01584 CheW-like domain IUJ44_02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_02025 PF01627 Hpt domain IUJ44_02030 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IUJ44_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUJ44_02035 PF01584 CheW-like domain IUJ44_02040 PF00072 Response regulator receiver domain IUJ44_02045 PF00072 Response regulator receiver domain IUJ44_02060 PF00873 AcrB/AcrD/AcrF family IUJ44_02065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUJ44_02065 PF03129 Anticodon binding domain IUJ44_02065 PF04073 Aminoacyl-tRNA editing domain IUJ44_02070 PF07411 Domain of unknown function (DUF1508) IUJ44_02075 PF03831 PhnA domain IUJ44_02075 PF08274 PhnA Zinc-Ribbon IUJ44_02080 PF04343 Protein of unknown function, DUF488 IUJ44_02090 PF01571 Aminomethyltransferase folate-binding domain IUJ44_02095 PF10411 Disulfide bond isomerase protein N-terminus IUJ44_02095 PF13098 Thioredoxin-like domain IUJ44_02105 PF03547 Membrane transport protein IUJ44_02110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUJ44_02115 PF00593 TonB dependent receptor IUJ44_02115 PF07715 TonB-dependent Receptor Plug Domain IUJ44_02120 PF02245 Methylpurine-DNA glycosylase (MPG) IUJ44_02125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IUJ44_02125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IUJ44_02125 PF06827 Zinc finger found in FPG and IleRS IUJ44_02140 PF01741 Large-conductance mechanosensitive channel, MscL IUJ44_02145 PF00009 Elongation factor Tu GTP binding domain IUJ44_02145 PF03144 Elongation factor Tu domain 2 IUJ44_02145 PF00679 Elongation factor G C-terminus IUJ44_02150 PF00860 Permease family IUJ44_02155 PF08468 Methyltransferase small domain N-terminal IUJ44_02155 PF05175 Methyltransferase small domain IUJ44_02160 PF00324 Amino acid permease IUJ44_02165 PF01139 tRNA-splicing ligase RtcB IUJ44_02175 PF00691 OmpA family IUJ44_02175 PF13505 Outer membrane protein beta-barrel domain IUJ44_02185 PF00108 Thiolase, N-terminal domain IUJ44_02185 PF02803 Thiolase, C-terminal domain IUJ44_02195 PF00893 Small Multidrug Resistance protein IUJ44_02205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IUJ44_02205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IUJ44_02210 PF01011 PQQ enzyme repeat IUJ44_02215 PF04966 Carbohydrate-selective porin, OprB family IUJ44_02220 PF02515 CoA-transferase family III IUJ44_02225 PF12833 Helix-turn-helix domain IUJ44_02225 PF02311 AraC-like ligand binding domain IUJ44_02230 PF00108 Thiolase, N-terminal domain IUJ44_02230 PF02803 Thiolase, C-terminal domain IUJ44_02235 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_02235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUJ44_02235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUJ44_02260 PF03006 Haemolysin-III related IUJ44_02265 PF00083 Sugar (and other) transporter IUJ44_02265 PF07690 Major Facilitator Superfamily IUJ44_02275 PF02810 SEC-C motif IUJ44_02275 PF01043 SecA preprotein cross-linking domain IUJ44_02275 PF07516 SecA Wing and Scaffold domain IUJ44_02275 PF07517 SecA DEAD-like domain IUJ44_02280 PF10417 C-terminal domain of 1-Cys peroxiredoxin IUJ44_02280 PF00578 AhpC/TSA family IUJ44_02285 PF00753 Metallo-beta-lactamase superfamily IUJ44_02300 PF02875 Mur ligase family, glutamate ligase domain IUJ44_02300 PF08245 Mur ligase middle domain IUJ44_02305 PF01039 Carboxyl transferase domain IUJ44_02310 PF00290 Tryptophan synthase alpha chain IUJ44_02335 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_02340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IUJ44_02345 PF07715 TonB-dependent Receptor Plug Domain IUJ44_02345 PF00593 TonB dependent receptor IUJ44_02350 PF01923 Cobalamin adenosyltransferase IUJ44_02370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IUJ44_02375 PF00072 Response regulator receiver domain IUJ44_02375 PF00486 Transcriptional regulatory protein, C terminal IUJ44_02380 PF00672 HAMP domain IUJ44_02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_02380 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_02390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_02390 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUJ44_02390 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_02390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_02395 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUJ44_02395 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_02395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_02395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_02400 PF03466 LysR substrate binding domain IUJ44_02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_02405 PF00043 Glutathione S-transferase, C-terminal domain IUJ44_02405 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_02410 PF06146 Phosphate-starvation-inducible E IUJ44_02430 PF07715 TonB-dependent Receptor Plug Domain IUJ44_02430 PF00593 TonB dependent receptor IUJ44_02440 PF01336 OB-fold nucleic acid binding domain IUJ44_02440 PF02938 GAD domain IUJ44_02440 PF00152 tRNA synthetases class II (D, K and N) IUJ44_02445 PF11380 Stealth protein CR2, conserved region 2 IUJ44_02445 PF17102 Stealth protein CR3, conserved region 3 IUJ44_02445 PF17101 Stealth protein CR1, conserved region 1 IUJ44_02470 PF13439 Glycosyltransferase Family 4 IUJ44_02470 PF00534 Glycosyl transferases group 1 IUJ44_02475 PF00535 Glycosyl transferase family 2 IUJ44_02480 PF01522 Polysaccharide deacetylase IUJ44_02495 PF01063 Amino-transferase class IV IUJ44_02500 PF08335 GlnD PII-uridylyltransferase IUJ44_02500 PF03710 Glutamate-ammonia ligase adenylyltransferase IUJ44_02505 PF07689 KaiB domain IUJ44_02505 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_02515 PF02547 Queuosine biosynthesis protein IUJ44_02535 PF01702 Queuine tRNA-ribosyltransferase IUJ44_02540 PF02699 Preprotein translocase subunit IUJ44_02545 PF13721 SecD export protein N-terminal TM region IUJ44_02545 PF02355 Protein export membrane protein IUJ44_02545 PF07549 SecD/SecF GG Motif IUJ44_02550 PF07549 SecD/SecF GG Motif IUJ44_02550 PF02355 Protein export membrane protein IUJ44_02555 PF04127 DNA / pantothenate metabolism flavoprotein IUJ44_02555 PF02441 Flavoprotein IUJ44_02560 PF04002 RadC-like JAB domain IUJ44_02565 PF01062 Bestrophin, RFP-TM, chloride channel IUJ44_02570 PF02811 PHP domain IUJ44_02575 PF04279 Intracellular septation protein A IUJ44_02580 PF03795 YCII-related domain IUJ44_02590 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IUJ44_02590 PF01266 FAD dependent oxidoreductase IUJ44_02600 PF04461 Protein of unknown function (DUF520) IUJ44_02610 PF03061 Thioesterase superfamily IUJ44_02615 PF00085 Thioredoxin IUJ44_02620 PF00561 alpha/beta hydrolase fold IUJ44_02625 PF04273 Putative phosphatase (DUF442) IUJ44_02625 PF00753 Metallo-beta-lactamase superfamily IUJ44_02635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUJ44_02635 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_02670 PF17152 Periplasmic sensor domain IUJ44_02670 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_02675 PF01389 OmpA-like transmembrane domain IUJ44_02675 PF00691 OmpA family IUJ44_02680 PF00149 Calcineurin-like phosphoesterase IUJ44_02680 PF10518 TAT (twin-arginine translocation) pathway signal sequence IUJ44_02685 PF13091 PLD-like domain IUJ44_02695 PF13167 GTP-binding GTPase N-terminal IUJ44_02695 PF16360 GTP-binding GTPase Middle Region IUJ44_02695 PF01926 50S ribosome-binding GTPase IUJ44_02715 PF00149 Calcineurin-like phosphoesterase IUJ44_02720 PF00398 Ribosomal RNA adenine dimethylase IUJ44_02725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IUJ44_02730 PF00572 Ribosomal protein L13 IUJ44_02735 PF00380 Ribosomal protein S9/S16 IUJ44_02740 PF00043 Glutathione S-transferase, C-terminal domain IUJ44_02740 PF13417 Glutathione S-transferase, N-terminal domain IUJ44_02745 PF04386 Stringent starvation protein B IUJ44_02755 PF02785 Biotin carboxylase C-terminal domain IUJ44_02755 PF00289 Biotin carboxylase, N-terminal domain IUJ44_02755 PF00364 Biotin-requiring enzyme IUJ44_02755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUJ44_02760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUJ44_02760 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_02760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUJ44_02765 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_02765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_02765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_02770 PF01039 Carboxyl transferase domain IUJ44_02785 PF17932 Tetracyclin repressor-like, C-terminal domain IUJ44_02785 PF00440 Bacterial regulatory proteins, tetR family IUJ44_02790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_02790 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_02790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_02835 PF01066 CDP-alcohol phosphatidyltransferase IUJ44_02840 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IUJ44_02860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IUJ44_02860 PF00056 lactate/malate dehydrogenase, NAD binding domain IUJ44_02870 PF01464 Transglycosylase SLT domain IUJ44_02870 PF10145 Phage-related minor tail protein IUJ44_02870 PF01551 Peptidase family M23 IUJ44_02875 PF04055 Radical SAM superfamily IUJ44_02875 PF01938 TRAM domain IUJ44_02875 PF00919 Uncharacterized protein family UPF0004 IUJ44_02880 PF02562 PhoH-like protein IUJ44_02885 PF02130 Uncharacterized protein family UPF0054 IUJ44_02910 PF03358 NADPH-dependent FMN reductase IUJ44_02915 PF03631 Virulence factor BrkB IUJ44_02920 PF00892 EamA-like transporter family IUJ44_02925 PF12833 Helix-turn-helix domain IUJ44_02930 PF01557 Fumarylacetoacetate (FAA) hydrolase family IUJ44_02975 PF00773 RNB domain IUJ44_02975 PF00575 S1 RNA binding domain IUJ44_02975 PF08461 Ribonuclease R winged-helix domain IUJ44_02975 PF08206 Ribonuclease B OB domain IUJ44_02975 PF17876 Cold shock domain IUJ44_02980 PF01432 Peptidase family M3 IUJ44_02985 PF09526 Probable metal-binding protein (DUF2387) IUJ44_03015 PF03937 Flavinator of succinate dehydrogenase IUJ44_03020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_03020 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_03020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_03025 PF00743 Flavin-binding monooxygenase-like IUJ44_03030 PF01196 Ribosomal protein L17 IUJ44_03035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IUJ44_03035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IUJ44_03035 PF01000 RNA polymerase Rpb3/RpoA insert domain IUJ44_03040 PF00163 Ribosomal protein S4/S9 N-terminal domain IUJ44_03040 PF01479 S4 domain IUJ44_03045 PF00411 Ribosomal protein S11 IUJ44_03050 PF00416 Ribosomal protein S13/S18 IUJ44_03055 PF00444 Ribosomal protein L36 IUJ44_03060 PF00344 SecY translocase IUJ44_03065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IUJ44_03070 PF00327 Ribosomal protein L30p/L7e IUJ44_03075 PF03719 Ribosomal protein S5, C-terminal domain IUJ44_03075 PF00333 Ribosomal protein S5, N-terminal domain IUJ44_03080 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IUJ44_03085 PF00347 Ribosomal protein L6 IUJ44_03090 PF00410 Ribosomal protein S8 IUJ44_03095 PF00253 Ribosomal protein S14p/S29e IUJ44_03100 PF00281 Ribosomal protein L5 IUJ44_03100 PF00673 ribosomal L5P family C-terminus IUJ44_03105 PF00467 KOW motif IUJ44_03105 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IUJ44_03110 PF00238 Ribosomal protein L14p/L23e IUJ44_03115 PF00366 Ribosomal protein S17 IUJ44_03120 PF00831 Ribosomal L29 protein IUJ44_03125 PF00252 Ribosomal protein L16p/L10e IUJ44_03130 PF00189 Ribosomal protein S3, C-terminal domain IUJ44_03130 PF07650 KH domain IUJ44_03135 PF00237 Ribosomal protein L22p/L17e IUJ44_03140 PF00203 Ribosomal protein S19 IUJ44_03145 PF03947 Ribosomal Proteins L2, C-terminal domain IUJ44_03145 PF00181 Ribosomal Proteins L2, RNA binding domain IUJ44_03150 PF00276 Ribosomal protein L23 IUJ44_03155 PF00573 Ribosomal protein L4/L1 family IUJ44_03160 PF00297 Ribosomal protein L3 IUJ44_03165 PF00338 Ribosomal protein S10p/S20e IUJ44_03170 PF00117 Glutamine amidotransferase class-I IUJ44_03175 PF01053 Cys/Met metabolism PLP-dependent enzyme IUJ44_03180 PF05872 Bacterial protein of unknown function (DUF853) IUJ44_03185 PF00970 Oxidoreductase FAD-binding domain IUJ44_03185 PF00042 Globin IUJ44_03185 PF00175 Oxidoreductase NAD-binding domain IUJ44_03190 PF02082 Transcriptional regulator IUJ44_03195 PF01926 50S ribosome-binding GTPase IUJ44_03205 PF00375 Sodium:dicarboxylate symporter family IUJ44_03215 PF01553 Acyltransferase IUJ44_03230 PF17191 RecG wedge domain IUJ44_03230 PF00271 Helicase conserved C-terminal domain IUJ44_03230 PF00270 DEAD/DEAH box helicase IUJ44_03235 PF00156 Phosphoribosyl transferase domain IUJ44_03240 PF00293 NUDIX domain IUJ44_03245 PF03641 Possible lysine decarboxylase IUJ44_03250 PF01544 CorA-like Mg2+ transporter protein IUJ44_03260 PF05494 MlaC protein IUJ44_03270 PF02405 Permease MlaE IUJ44_03275 PF00005 ABC transporter IUJ44_03285 PF12343 Cold shock protein DEAD box A IUJ44_03285 PF03880 DbpA RNA binding domain IUJ44_03285 PF00270 DEAD/DEAH box helicase IUJ44_03285 PF00271 Helicase conserved C-terminal domain IUJ44_03290 PF00459 Inositol monophosphatase family IUJ44_03295 PF02779 Transketolase, pyrimidine binding domain IUJ44_03295 PF02780 Transketolase, C-terminal domain IUJ44_03295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IUJ44_03300 PF00925 GTP cyclohydrolase II IUJ44_03305 PF01218 Coproporphyrinogen III oxidase IUJ44_03310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IUJ44_03310 PF01488 Shikimate / quinate 5-dehydrogenase IUJ44_03310 PF08501 Shikimate dehydrogenase substrate binding domain IUJ44_03320 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUJ44_03320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_03320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_03320 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_03330 PF04024 PspC domain IUJ44_03335 PF00571 CBS domain IUJ44_03350 PF07690 Major Facilitator Superfamily IUJ44_03355 PF02091 Glycyl-tRNA synthetase alpha subunit IUJ44_03360 PF05746 DALR anticodon binding domain IUJ44_03360 PF02092 Glycyl-tRNA synthetase beta subunit IUJ44_03370 PF00892 EamA-like transporter family IUJ44_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_03375 PF03466 LysR substrate binding domain IUJ44_03390 PF05922 Peptidase inhibitor I9 IUJ44_03390 PF00082 Subtilase family IUJ44_03405 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IUJ44_03410 PF04996 Succinylarginine dihydrolase IUJ44_03415 PF00171 Aldehyde dehydrogenase family IUJ44_03420 PF04958 Arginine N-succinyltransferase beta subunit IUJ44_03425 PF00202 Aminotransferase class-III IUJ44_03430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IUJ44_03430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IUJ44_03435 PF00324 Amino acid permease IUJ44_03445 PF08241 Methyltransferase domain IUJ44_03465 PF13614 AAA domain IUJ44_03470 PF01594 AI-2E family transporter IUJ44_03475 PF00080 Copper/zinc superoxide dismutase (SODC) IUJ44_03480 PF12805 FUSC-like inner membrane protein yccS IUJ44_03485 PF07690 Major Facilitator Superfamily IUJ44_03495 PF02525 Flavodoxin-like fold IUJ44_03500 PF03992 Antibiotic biosynthesis monooxygenase IUJ44_03510 PF01565 FAD binding domain IUJ44_03510 PF02913 FAD linked oxidases, C-terminal domain IUJ44_03515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUJ44_03515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUJ44_03520 PF00892 EamA-like transporter family IUJ44_03525 PF00892 EamA-like transporter family IUJ44_03535 PF01925 Sulfite exporter TauE/SafE IUJ44_03540 PF01509 TruB family pseudouridylate synthase (N terminal domain) IUJ44_03540 PF16198 tRNA pseudouridylate synthase B C-terminal domain IUJ44_03540 PF09157 Pseudouridine synthase II TruB, C-terminal IUJ44_03545 PF03280 Proteobacterial lipase chaperone protein IUJ44_03550 PF00561 alpha/beta hydrolase fold IUJ44_03555 PF01245 Ribosomal protein L19 IUJ44_03560 PF01746 tRNA (Guanine-1)-methyltransferase IUJ44_03565 PF01782 RimM N-terminal domain IUJ44_03565 PF05239 PRC-barrel domain IUJ44_03570 PF00886 Ribosomal protein S16 IUJ44_03610 PF02401 LytB protein IUJ44_03615 PF00625 Guanylate kinase IUJ44_03620 PF01192 RNA polymerase Rpb6 IUJ44_03630 PF13291 ACT domain IUJ44_03630 PF04607 Region found in RelA / SpoT proteins IUJ44_03630 PF02824 TGS domain IUJ44_03635 PF01042 Endoribonuclease L-PSP IUJ44_03640 PF04324 BFD-like [2Fe-2S] binding domain IUJ44_03645 PF00210 Ferritin-like domain IUJ44_03650 PF04932 O-Antigen ligase IUJ44_03650 PF15864 Protein glycosylation ligase IUJ44_03650 PF11846 Virulence factor membrane-bound polymerase, C-terminal IUJ44_03660 PF07963 Prokaryotic N-terminal methylation motif IUJ44_03660 PF00114 Pilin (bacterial filament) IUJ44_03670 PF04536 TPM domain IUJ44_03675 PF04011 LemA family IUJ44_03685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IUJ44_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_03690 PF00310 Glutamine amidotransferases class-II IUJ44_03690 PF04898 Glutamate synthase central domain IUJ44_03690 PF01645 Conserved region in glutamate synthase IUJ44_03690 PF01493 GXGXG motif IUJ44_03700 PF01761 3-dehydroquinate synthase IUJ44_03705 PF01202 Shikimate kinase IUJ44_03710 PF00263 Bacterial type II and III secretion system protein IUJ44_03710 PF03958 Bacterial type II/III secretion system short domain IUJ44_03710 PF07660 Secretin and TonB N terminus short domain IUJ44_03710 PF11741 AMIN domain IUJ44_03720 PF04350 Pilus assembly protein, PilO IUJ44_03730 PF11104 Type IV pilus assembly protein PilM; IUJ44_03735 PF17092 Penicillin-binding protein OB-like domain IUJ44_03735 PF00912 Transglycosylase IUJ44_03735 PF00905 Penicillin binding protein transpeptidase domain IUJ44_03740 PF13847 Methyltransferase domain IUJ44_03750 PF00953 Glycosyl transferase family 4 IUJ44_03755 PF02875 Mur ligase family, glutamate ligase domain IUJ44_03755 PF08245 Mur ligase middle domain IUJ44_03755 PF01225 Mur ligase family, catalytic domain IUJ44_03760 PF01225 Mur ligase family, catalytic domain IUJ44_03760 PF02875 Mur ligase family, glutamate ligase domain IUJ44_03760 PF08245 Mur ligase middle domain IUJ44_03765 PF03717 Penicillin-binding Protein dimerisation domain IUJ44_03765 PF00905 Penicillin binding protein transpeptidase domain IUJ44_03775 PF01795 MraW methylase family IUJ44_03790 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUJ44_03805 PF00324 Amino acid permease IUJ44_03835 PF01545 Cation efflux family IUJ44_03840 PF00873 AcrB/AcrD/AcrF family IUJ44_03845 PF00529 HlyD membrane-fusion protein of T1SS IUJ44_03845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_03870 PF00005 ABC transporter IUJ44_03870 PF12848 ABC transporter IUJ44_03875 PF01053 Cys/Met metabolism PLP-dependent enzyme IUJ44_03880 PF00106 short chain dehydrogenase IUJ44_03885 PF01740 STAS domain IUJ44_03885 PF00916 Sulfate permease family IUJ44_03890 PF17674 HHH domain IUJ44_03890 PF09371 Tex-like protein N-terminal domain IUJ44_03890 PF16921 Tex protein YqgF-like domain IUJ44_03890 PF00575 S1 RNA binding domain IUJ44_03895 PF00072 Response regulator receiver domain IUJ44_03895 PF00486 Transcriptional regulatory protein, C terminal IUJ44_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_03900 PF00672 HAMP domain IUJ44_03900 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_03910 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IUJ44_03910 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IUJ44_03915 PF00583 Acetyltransferase (GNAT) family IUJ44_03935 PF00475 Imidazoleglycerol-phosphate dehydratase IUJ44_03940 PF00117 Glutamine amidotransferase class-I IUJ44_03955 PF00977 Histidine biosynthesis protein IUJ44_03980 PF01636 Phosphotransferase enzyme family IUJ44_03985 PF00977 Histidine biosynthesis protein IUJ44_04000 PF00230 Major intrinsic protein IUJ44_04025 PF02705 K+ potassium transporter IUJ44_04050 PF02525 Flavodoxin-like fold IUJ44_04055 PF01638 HxlR-like helix-turn-helix IUJ44_04080 PF12833 Helix-turn-helix domain IUJ44_04080 PF02311 AraC-like ligand binding domain IUJ44_04085 PF00248 Aldo/keto reductase family IUJ44_04105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_04105 PF03466 LysR substrate binding domain IUJ44_04110 PF07690 Major Facilitator Superfamily IUJ44_04130 PF01593 Flavin containing amine oxidoreductase IUJ44_04135 PF02678 Pirin IUJ44_04135 PF05726 Pirin C-terminal cupin domain IUJ44_04140 PF00857 Isochorismatase family IUJ44_04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_04150 PF00171 Aldehyde dehydrogenase family IUJ44_04155 PF00202 Aminotransferase class-III IUJ44_04160 PF00392 Bacterial regulatory proteins, gntR family IUJ44_04160 PF00155 Aminotransferase class I and II IUJ44_04165 PF00324 Amino acid permease IUJ44_04175 PF03591 AzlC protein IUJ44_04220 PF00436 Single-strand binding protein family IUJ44_04225 PF07690 Major Facilitator Superfamily IUJ44_04235 PF08543 Phosphomethylpyrimidine kinase IUJ44_04235 PF03070 TENA/THI-4/PQQC family IUJ44_04235 PF02581 Thiamine monophosphate synthase IUJ44_04240 PF06942 GlpM protein IUJ44_04250 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_04250 PF00107 Zinc-binding dehydrogenase IUJ44_04255 PF16925 Tetracyclin repressor-like, C-terminal domain IUJ44_04255 PF00440 Bacterial regulatory proteins, tetR family IUJ44_04260 PF17755 UvrA DNA-binding domain IUJ44_04260 PF17760 UvrA interaction domain IUJ44_04260 PF00005 ABC transporter IUJ44_04265 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_04275 PF02028 BCCT, betaine/carnitine/choline family transporter IUJ44_04285 PF00474 Sodium:solute symporter family IUJ44_04290 PF04341 Protein of unknown function, DUF485 IUJ44_04295 PF00072 Response regulator receiver domain IUJ44_04295 PF01627 Hpt domain IUJ44_04295 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_04295 PF00672 HAMP domain IUJ44_04305 PF00072 Response regulator receiver domain IUJ44_04305 PF00196 Bacterial regulatory proteins, luxR family IUJ44_04310 PF03358 NADPH-dependent FMN reductase IUJ44_04315 PF00296 Luciferase-like monooxygenase IUJ44_04320 PF01037 Lrp/AsnC ligand binding domain IUJ44_04325 PF00857 Isochorismatase family IUJ44_04330 PF16177 Acetyl-coenzyme A synthetase N-terminus IUJ44_04330 PF00501 AMP-binding enzyme IUJ44_04330 PF13193 AMP-binding enzyme C-terminal domain IUJ44_04340 PF00924 Mechanosensitive ion channel IUJ44_04345 PF04452 RNA methyltransferase IUJ44_04350 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IUJ44_04355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUJ44_04375 PF02272 DHHA1 domain IUJ44_04375 PF01368 DHH family IUJ44_04375 PF17768 RecJ OB domain IUJ44_04380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IUJ44_04380 PF01243 Pyridoxamine 5'-phosphate oxidase IUJ44_04385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUJ44_04385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUJ44_04385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUJ44_04385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUJ44_04390 PF00478 IMP dehydrogenase / GMP reductase domain IUJ44_04390 PF00571 CBS domain IUJ44_04395 PF03692 Putative zinc- or iron-chelating domain IUJ44_04400 PF00258 Flavodoxin IUJ44_04400 PF01613 Flavin reductase like domain IUJ44_04405 PF07715 TonB-dependent Receptor Plug Domain IUJ44_04405 PF00593 TonB dependent receptor IUJ44_04410 PF01169 Uncharacterized protein family UPF0016 IUJ44_04420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUJ44_04420 PF00364 Biotin-requiring enzyme IUJ44_04420 PF02817 e3 binding domain IUJ44_04425 PF17831 Pyruvate dehydrogenase E1 component middle domain IUJ44_04425 PF00456 Transketolase, thiamine diphosphate binding domain IUJ44_04430 PF01551 Peptidase family M23 IUJ44_04440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IUJ44_04445 PF12327 FtsZ family, C-terminal domain IUJ44_04445 PF00091 Tubulin/FtsZ family, GTPase domain IUJ44_04450 PF02491 SHS2 domain inserted in FTSA IUJ44_04455 PF03799 Cell division protein FtsQ IUJ44_04455 PF08478 POTRA domain, FtsQ-type IUJ44_04460 PF07478 D-ala D-ala ligase C-terminus IUJ44_04460 PF01820 D-ala D-ala ligase N-terminus IUJ44_04465 PF01225 Mur ligase family, catalytic domain IUJ44_04465 PF02875 Mur ligase family, glutamate ligase domain IUJ44_04465 PF08245 Mur ligase middle domain IUJ44_04470 PF03033 Glycosyltransferase family 28 N-terminal domain IUJ44_04470 PF04101 Glycosyltransferase family 28 C-terminal domain IUJ44_04475 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IUJ44_04475 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IUJ44_04485 PF00593 TonB dependent receptor IUJ44_04485 PF07715 TonB-dependent Receptor Plug Domain IUJ44_04490 PF00156 Phosphoribosyl transferase domain IUJ44_04495 PF03372 Endonuclease/Exonuclease/phosphatase family IUJ44_04500 PF03960 ArsC family IUJ44_04510 PF07859 alpha/beta hydrolase fold IUJ44_04515 PF07694 5TMR of 5TMR-LYT IUJ44_04515 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_04520 PF11412 Disulphide bond corrector protein DsbC IUJ44_04520 PF02683 Cytochrome C biogenesis protein transmembrane region IUJ44_04550 PF00576 HIUase/Transthyretin family IUJ44_04555 PF00860 Permease family IUJ44_04565 PF01494 FAD binding domain IUJ44_04570 PF03561 Allantoicase repeat IUJ44_04575 PF04115 Ureidoglycolate lyase IUJ44_04580 PF00106 short chain dehydrogenase IUJ44_04585 PF00204 DNA gyrase B IUJ44_04585 PF00986 DNA gyrase B subunit, carboxyl terminus IUJ44_04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_04585 PF01751 Toprim domain IUJ44_04590 PF05728 Uncharacterised protein family (UPF0227) IUJ44_04605 PF00182 Chitinase class I IUJ44_04615 PF02600 Disulfide bond formation protein DsbB IUJ44_04620 PF04262 Glutamate-cysteine ligase IUJ44_04635 PF04286 Protein of unknown function (DUF445) IUJ44_04640 PF00155 Aminotransferase class I and II IUJ44_04645 PF01554 MatE IUJ44_04650 PF00106 short chain dehydrogenase IUJ44_04660 PF00072 Response regulator receiver domain IUJ44_04660 PF00486 Transcriptional regulatory protein, C terminal IUJ44_04665 PF11808 Phosphate regulon sensor protein PhoR IUJ44_04665 PF00989 PAS fold IUJ44_04665 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_04675 PF02666 Phosphatidylserine decarboxylase IUJ44_04680 PF00581 Rhodanese-like domain IUJ44_04685 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IUJ44_04685 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IUJ44_04695 PF06628 Catalase-related immune-responsive IUJ44_04695 PF00199 Catalase IUJ44_04700 PF02580 D-Tyr-tRNA(Tyr) deacylase IUJ44_04725 PF00925 GTP cyclohydrolase II IUJ44_04725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IUJ44_04730 PF00885 6,7-dimethyl-8-ribityllumazine synthase IUJ44_04735 PF01029 NusB family IUJ44_04740 PF02769 AIR synthase related protein, C-terminal domain IUJ44_04740 PF00586 AIR synthase related protein, N-terminal domain IUJ44_04745 PF04608 Phosphatidylglycerophosphatase A IUJ44_04750 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_04750 PF14602 Hexapeptide repeat of succinyl-transferase IUJ44_04750 PF12804 MobA-like NTP transferase domain IUJ44_04755 PF01380 SIS domain IUJ44_04760 PF01177 Asp/Glu/Hydantoin racemase IUJ44_04765 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_04775 PF00491 Arginase family IUJ44_04780 PF01979 Amidohydrolase family IUJ44_04785 PF00324 Amino acid permease IUJ44_04790 PF00221 Aromatic amino acid lyase IUJ44_04795 PF17392 Urocanase C-terminal domain IUJ44_04795 PF17391 Urocanase N-terminal domain IUJ44_04795 PF01175 Urocanase Rossmann-like domain IUJ44_04800 PF05962 HutD IUJ44_04805 PF07702 UTRA domain IUJ44_04805 PF00392 Bacterial regulatory proteins, gntR family IUJ44_04815 PF07683 Cobalamin synthesis protein cobW C-terminal domain IUJ44_04815 PF02492 CobW/HypB/UreG, nucleotide-binding domain IUJ44_04825 PF00324 Amino acid permease IUJ44_04835 PF14497 Glutathione S-transferase, C-terminal domain IUJ44_04835 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_04840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUJ44_04850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUJ44_04855 PF04463 Protein of unknown function (DUF523) IUJ44_04865 PF01758 Sodium Bile acid symporter family IUJ44_04870 PF00857 Isochorismatase family IUJ44_04875 PF00701 Dihydrodipicolinate synthetase family IUJ44_04885 PF01259 SAICAR synthetase IUJ44_04895 PF01226 Formate/nitrite transporter IUJ44_04900 PF00004 ATPase family associated with various cellular activities (AAA) IUJ44_04900 PF16193 AAA C-terminal domain IUJ44_04900 PF12002 MgsA AAA+ ATPase C terminal IUJ44_04905 PF07995 Glucose / Sorbosone dehydrogenase IUJ44_04910 PF03692 Putative zinc- or iron-chelating domain IUJ44_04915 PF07043 Protein of unknown function (DUF1328) IUJ44_04930 PF00633 Helix-hairpin-helix motif IUJ44_04930 PF00730 HhH-GPD superfamily base excision DNA repair protein IUJ44_04930 PF14815 NUDIX domain IUJ44_04930 PF10576 Iron-sulfur binding domain of endonuclease III IUJ44_04945 PF03352 Methyladenine glycosylase IUJ44_04950 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_04950 PF00107 Zinc-binding dehydrogenase IUJ44_04955 PF00155 Aminotransferase class I and II IUJ44_04955 PF00392 Bacterial regulatory proteins, gntR family IUJ44_04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_04970 PF03466 LysR substrate binding domain IUJ44_04975 PF00248 Aldo/keto reductase family IUJ44_04980 PF07690 Major Facilitator Superfamily IUJ44_04990 PF01113 Dihydrodipicolinate reductase, N-terminus IUJ44_04990 PF05173 Dihydrodipicolinate reductase, C-terminus IUJ44_05000 PF01556 DnaJ C terminal domain IUJ44_05000 PF00226 DnaJ domain IUJ44_05000 PF00684 DnaJ central domain IUJ44_05010 PF00873 AcrB/AcrD/AcrF family IUJ44_05015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_05020 PF00440 Bacterial regulatory proteins, tetR family IUJ44_05020 PF08361 MAATS-type transcriptional repressor, C-terminal region IUJ44_05025 PF00311 Phosphoenolpyruvate carboxylase IUJ44_05030 PF00860 Permease family IUJ44_05035 PF03466 LysR substrate binding domain IUJ44_05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_05050 PF00920 Dehydratase family IUJ44_05055 PF00551 Formyl transferase IUJ44_05055 PF02911 Formyl transferase, C-terminal domain IUJ44_05060 PF01189 16S rRNA methyltransferase RsmB/F IUJ44_05060 PF01029 NusB family IUJ44_05070 PF00209 Sodium:neurotransmitter symporter family IUJ44_05080 PF00043 Glutathione S-transferase, C-terminal domain IUJ44_05080 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_05115 PF00579 tRNA synthetases class I (W and Y) IUJ44_05120 PF03702 Anhydro-N-acetylmuramic acid kinase IUJ44_05125 PF00561 alpha/beta hydrolase fold IUJ44_05130 PF01521 Iron-sulphur cluster biosynthesis IUJ44_05150 PF12848 ABC transporter IUJ44_05150 PF00005 ABC transporter IUJ44_05155 PF09335 SNARE associated Golgi protein IUJ44_05165 PF01751 Toprim domain IUJ44_05165 PF00204 DNA gyrase B IUJ44_05165 PF18053 DNA gyrase B subunit insert domain IUJ44_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_05165 PF00986 DNA gyrase B subunit, carboxyl terminus IUJ44_05170 PF02463 RecF/RecN/SMC N terminal domain IUJ44_05175 PF02768 DNA polymerase III beta subunit, C-terminal domain IUJ44_05175 PF02767 DNA polymerase III beta subunit, central domain IUJ44_05175 PF00712 DNA polymerase III beta subunit, N-terminal domain IUJ44_05185 PF08299 Bacterial dnaA protein helix-turn-helix IUJ44_05185 PF00308 Bacterial dnaA protein IUJ44_05185 PF11638 DnaA N-terminal domain IUJ44_05190 PF00468 Ribosomal protein L34 IUJ44_05195 PF00825 Ribonuclease P IUJ44_05200 PF01809 Putative membrane protein insertion efficiency factor IUJ44_05205 PF02096 60Kd inner membrane protein IUJ44_05205 PF14849 YidC periplasmic domain IUJ44_05210 PF01926 50S ribosome-binding GTPase IUJ44_05210 PF12631 MnmE helical domain IUJ44_05210 PF10396 GTP-binding protein TrmE N-terminus IUJ44_05215 PF02583 Metal-sensitive transcriptional repressor IUJ44_05220 PF16916 Dimerisation domain of Zinc Transporter IUJ44_05220 PF01545 Cation efflux family IUJ44_05225 PF10411 Disulfide bond isomerase protein N-terminus IUJ44_05225 PF13098 Thioredoxin-like domain IUJ44_05235 PF00156 Phosphoribosyl transferase domain IUJ44_05240 PF01979 Amidohydrolase family IUJ44_05245 PF00355 Rieske [2Fe-2S] domain IUJ44_05250 PF03738 Glutathionylspermidine synthase preATP-grasp IUJ44_05260 PF03741 Integral membrane protein TerC family IUJ44_05265 PF01569 PAP2 superfamily IUJ44_05275 PF08245 Mur ligase middle domain IUJ44_05275 PF01225 Mur ligase family, catalytic domain IUJ44_05275 PF02875 Mur ligase family, glutamate ligase domain IUJ44_05285 PF00731 AIR carboxylase IUJ44_05290 PF02222 ATP-grasp domain IUJ44_05290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IUJ44_05295 PF13406 Transglycosylase SLT domain IUJ44_05315 PF00012 Hsp70 protein IUJ44_05320 PF01025 GrpE IUJ44_05345 PF07859 alpha/beta hydrolase fold IUJ44_05350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IUJ44_05390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUJ44_05395 PF01252 Signal peptidase (SPase) II IUJ44_05400 PF06827 Zinc finger found in FPG and IleRS IUJ44_05400 PF00133 tRNA synthetases class I (I, L, M and V) IUJ44_05400 PF08264 Anticodon-binding domain of tRNA IUJ44_05405 PF06574 FAD synthetase IUJ44_05405 PF01687 Riboflavin kinase IUJ44_05415 PF01048 Phosphorylase superfamily IUJ44_05420 PF08362 YcdC-like protein, C-terminal region IUJ44_05420 PF00440 Bacterial regulatory proteins, tetR family IUJ44_05425 PF00005 ABC transporter IUJ44_05430 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_05435 PF00296 Luciferase-like monooxygenase IUJ44_05440 PF09084 NMT1/THI5 like IUJ44_05445 PF09084 NMT1/THI5 like IUJ44_05450 PF00696 Amino acid kinase family IUJ44_05450 PF00583 Acetyltransferase (GNAT) family IUJ44_05465 PF00106 short chain dehydrogenase IUJ44_05470 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_05480 PF01323 DSBA-like thioredoxin domain IUJ44_05485 PF08360 QacR-like protein, C-terminal region IUJ44_05485 PF00440 Bacterial regulatory proteins, tetR family IUJ44_05490 PF00440 Bacterial regulatory proteins, tetR family IUJ44_05495 PF00175 Oxidoreductase NAD-binding domain IUJ44_05500 PF00487 Fatty acid desaturase IUJ44_05505 PF01138 3' exoribonuclease family, domain 1 IUJ44_05505 PF03725 3' exoribonuclease family, domain 2 IUJ44_05605 PF01758 Sodium Bile acid symporter family IUJ44_05615 PF03358 NADPH-dependent FMN reductase IUJ44_05625 PF02796 Helix-turn-helix domain of resolvase IUJ44_05625 PF00239 Resolvase, N terminal domain IUJ44_05650 PF00809 Pterin binding enzyme IUJ44_05665 PF02661 Fic/DOC family IUJ44_05670 PF02796 Helix-turn-helix domain of resolvase IUJ44_05670 PF00239 Resolvase, N terminal domain IUJ44_05755 PF04185 Phosphoesterase family IUJ44_05755 PF05506 Domain of unknown function (DUF756) IUJ44_05765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IUJ44_05765 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IUJ44_05770 PF01510 N-acetylmuramoyl-L-alanine amidase IUJ44_05775 PF03023 Lipid II flippase MurJ IUJ44_05780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUJ44_05780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IUJ44_05785 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IUJ44_05785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUJ44_05790 PF13614 AAA domain IUJ44_05790 PF13807 G-rich domain on putative tyrosine kinase IUJ44_05790 PF02706 Chain length determinant protein IUJ44_05795 PF01451 Low molecular weight phosphotyrosine protein phosphatase IUJ44_05800 PF02563 Polysaccharide biosynthesis/export protein IUJ44_05800 PF10531 SLBB domain IUJ44_05800 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IUJ44_05805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IUJ44_05805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IUJ44_05805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IUJ44_05810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IUJ44_05810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IUJ44_05815 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_05820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IUJ44_05830 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_05830 PF14602 Hexapeptide repeat of succinyl-transferase IUJ44_05830 PF12464 Maltose acetyltransferase IUJ44_05835 PF00534 Glycosyl transferases group 1 IUJ44_05835 PF13439 Glycosyltransferase Family 4 IUJ44_05850 PF00534 Glycosyl transferases group 1 IUJ44_05855 PF00535 Glycosyl transferase family 2 IUJ44_05860 PF02397 Bacterial sugar transferase IUJ44_05865 PF00483 Nucleotidyl transferase IUJ44_05870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IUJ44_05870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IUJ44_05870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IUJ44_05875 PF00342 Phosphoglucose isomerase IUJ44_05880 PF16363 GDP-mannose 4,6 dehydratase IUJ44_05885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUJ44_05885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUJ44_05885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUJ44_05885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUJ44_05890 PF02652 L-lactate permease IUJ44_05895 PF07729 FCD domain IUJ44_05895 PF00392 Bacterial regulatory proteins, gntR family IUJ44_05900 PF01070 FMN-dependent dehydrogenase IUJ44_05905 PF01565 FAD binding domain IUJ44_05905 PF09330 D-lactate dehydrogenase, membrane binding IUJ44_05910 PF00155 Aminotransferase class I and II IUJ44_05915 PF07729 FCD domain IUJ44_05915 PF00392 Bacterial regulatory proteins, gntR family IUJ44_05925 PF00285 Citrate synthase, C-terminal domain IUJ44_05930 PF00330 Aconitase family (aconitate hydratase) IUJ44_05930 PF00694 Aconitase C-terminal domain IUJ44_05975 PF00109 Beta-ketoacyl synthase, N-terminal domain IUJ44_05975 PF02801 Beta-ketoacyl synthase, C-terminal domain IUJ44_05985 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IUJ44_05985 PF04717 Type VI secretion system, phage-baseplate injector IUJ44_05985 PF13296 Putative type VI secretion system Rhs element Vgr IUJ44_06015 PF00849 RNA pseudouridylate synthase IUJ44_06030 PF07715 TonB-dependent Receptor Plug Domain IUJ44_06030 PF00593 TonB dependent receptor IUJ44_06040 PF01037 Lrp/AsnC ligand binding domain IUJ44_06045 PF01266 FAD dependent oxidoreductase IUJ44_06050 PF01168 Alanine racemase, N-terminal domain IUJ44_06050 PF00842 Alanine racemase, C-terminal domain IUJ44_06055 PF01042 Endoribonuclease L-PSP IUJ44_06060 PF00324 Amino acid permease IUJ44_06065 PF00324 Amino acid permease IUJ44_06075 PF00171 Aldehyde dehydrogenase family IUJ44_06080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUJ44_06080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IUJ44_06085 PF13193 AMP-binding enzyme C-terminal domain IUJ44_06085 PF00501 AMP-binding enzyme IUJ44_06090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_06090 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_06090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_06095 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_06100 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_06105 PF00083 Sugar (and other) transporter IUJ44_06105 PF07690 Major Facilitator Superfamily IUJ44_06110 PF00765 Autoinducer synthase IUJ44_06120 PF03472 Autoinducer binding domain IUJ44_06120 PF00196 Bacterial regulatory proteins, luxR family IUJ44_06125 PF00501 AMP-binding enzyme IUJ44_06130 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_06130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_06130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_06135 PF16197 Ketoacyl-synthetase C-terminal extension IUJ44_06135 PF00975 Thioesterase domain IUJ44_06135 PF14765 Polyketide synthase dehydratase IUJ44_06135 PF08242 Methyltransferase domain IUJ44_06135 PF00109 Beta-ketoacyl synthase, N-terminal domain IUJ44_06135 PF00550 Phosphopantetheine attachment site IUJ44_06135 PF02801 Beta-ketoacyl synthase, C-terminal domain IUJ44_06140 PF00501 AMP-binding enzyme IUJ44_06140 PF13193 AMP-binding enzyme C-terminal domain IUJ44_06140 PF00668 Condensation domain IUJ44_06140 PF00550 Phosphopantetheine attachment site IUJ44_06140 PF00975 Thioesterase domain IUJ44_06155 PF12697 Alpha/beta hydrolase family IUJ44_06160 PF01648 4'-phosphopantetheinyl transferase superfamily IUJ44_06175 PF01722 BolA-like protein IUJ44_06185 PF13614 AAA domain IUJ44_06200 PF09335 SNARE associated Golgi protein IUJ44_06205 PF07681 DoxX IUJ44_06210 PF04286 Protein of unknown function (DUF445) IUJ44_06215 PF00117 Glutamine amidotransferase class-I IUJ44_06215 PF00958 GMP synthase C terminal domain IUJ44_06215 PF02540 NAD synthase IUJ44_06220 PF01909 Nucleotidyltransferase domain IUJ44_06220 PF13427 Domain of unknown function (DUF4111) IUJ44_06225 PF03551 Transcriptional regulator PadR-like family IUJ44_06235 PF02678 Pirin IUJ44_06235 PF05726 Pirin C-terminal cupin domain IUJ44_06255 PF00750 tRNA synthetases class I (R) IUJ44_06255 PF05746 DALR anticodon binding domain IUJ44_06255 PF03485 Arginyl tRNA synthetase N terminal domain IUJ44_06260 PF03949 Malic enzyme, NAD binding domain IUJ44_06260 PF00390 Malic enzyme, N-terminal domain IUJ44_06265 PF04261 Dyp-type peroxidase family IUJ44_06270 PF01810 LysE type translocator IUJ44_06275 PF00950 ABC 3 transport family IUJ44_06280 PF00005 ABC transporter IUJ44_06300 PF00119 ATP synthase A chain IUJ44_06305 PF00137 ATP synthase subunit C IUJ44_06310 PF00430 ATP synthase B/B' CF(0) IUJ44_06315 PF00213 ATP synthase delta (OSCP) subunit IUJ44_06320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUJ44_06320 PF00306 ATP synthase alpha/beta chain, C terminal domain IUJ44_06320 PF02874 ATP synthase alpha/beta family, beta-barrel domain IUJ44_06325 PF00231 ATP synthase IUJ44_06330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUJ44_06330 PF02874 ATP synthase alpha/beta family, beta-barrel domain IUJ44_06335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IUJ44_06345 PF00255 Glutathione peroxidase IUJ44_06355 PF07690 Major Facilitator Superfamily IUJ44_06360 PF00440 Bacterial regulatory proteins, tetR family IUJ44_06365 PF00892 EamA-like transporter family IUJ44_06370 PF01300 Telomere recombination IUJ44_06375 PF02481 DNA recombination-mediator protein A IUJ44_06375 PF17782 DprA winged helix domain IUJ44_06385 PF01327 Polypeptide deformylase IUJ44_06410 PF00440 Bacterial regulatory proteins, tetR family IUJ44_06445 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_06455 PF03358 NADPH-dependent FMN reductase IUJ44_06475 PF11842 Domain of unknown function (DUF3362) IUJ44_06475 PF04055 Radical SAM superfamily IUJ44_06475 PF08497 Radical SAM N-terminal IUJ44_06490 PF00817 impB/mucB/samB family IUJ44_06490 PF11799 impB/mucB/samB family C-terminal domain IUJ44_06490 PF11798 IMS family HHH motif IUJ44_06500 PF07690 Major Facilitator Superfamily IUJ44_06505 PF03641 Possible lysine decarboxylase IUJ44_06510 PF03471 Transporter associated domain IUJ44_06510 PF03741 Integral membrane protein TerC family IUJ44_06515 PF02810 SEC-C motif IUJ44_06520 PF03458 UPF0126 domain IUJ44_06525 PF07690 Major Facilitator Superfamily IUJ44_06530 PF03989 DNA gyrase C-terminal domain, beta-propeller IUJ44_06530 PF00521 DNA gyrase/topoisomerase IV, subunit A IUJ44_06535 PF00501 AMP-binding enzyme IUJ44_06535 PF13193 AMP-binding enzyme C-terminal domain IUJ44_06550 PF00719 Inorganic pyrophosphatase IUJ44_06555 PF03573 outer membrane porin, OprD family IUJ44_06565 PF00701 Dihydrodipicolinate synthetase family IUJ44_06575 PF00392 Bacterial regulatory proteins, gntR family IUJ44_06575 PF00155 Aminotransferase class I and II IUJ44_06580 PF13335 Magnesium chelatase, subunit ChlI C-terminal IUJ44_06580 PF01078 Magnesium chelatase, subunit ChlI IUJ44_06590 PF00543 Nitrogen regulatory protein P-II IUJ44_06595 PF00909 Ammonium Transporter Family IUJ44_06600 PF03477 ATP cone domain IUJ44_06605 PF01872 RibD C-terminal domain IUJ44_06605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IUJ44_06615 PF00677 Lumazine binding domain IUJ44_06635 PF00883 Cytosol aminopeptidase family, catalytic domain IUJ44_06635 PF02789 Cytosol aminopeptidase family, N-terminal domain IUJ44_06645 PF03739 Lipopolysaccharide export system permease LptF/LptG IUJ44_06650 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IUJ44_06650 PF01676 Metalloenzyme superfamily IUJ44_06655 PF00595 PDZ domain IUJ44_06655 PF03572 Peptidase family S41 IUJ44_06660 PF00158 Sigma-54 interaction domain IUJ44_06660 PF00072 Response regulator receiver domain IUJ44_06660 PF02954 Bacterial regulatory protein, Fis family IUJ44_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_06665 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_06670 PF00072 Response regulator receiver domain IUJ44_06670 PF00196 Bacterial regulatory proteins, luxR family IUJ44_06675 PF00768 D-alanyl-D-alanine carboxypeptidase IUJ44_06680 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_06685 PF03447 Homoserine dehydrogenase, NAD binding domain IUJ44_06685 PF01842 ACT domain IUJ44_06685 PF00742 Homoserine dehydrogenase IUJ44_06690 PF10411 Disulfide bond isomerase protein N-terminus IUJ44_06690 PF13098 Thioredoxin-like domain IUJ44_06695 PF02899 Phage integrase, N-terminal SAM-like domain IUJ44_06695 PF00589 Phage integrase family IUJ44_06705 PF02421 Ferrous iron transport protein B IUJ44_06705 PF07670 Nucleoside recognition IUJ44_06705 PF07664 Ferrous iron transport protein B C terminus IUJ44_06715 PF02875 Mur ligase family, glutamate ligase domain IUJ44_06715 PF08245 Mur ligase middle domain IUJ44_06720 PF01098 Cell cycle protein IUJ44_06725 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUJ44_06730 PF01258 Prokaryotic dksA/traR C4-type zinc finger IUJ44_06735 PF00149 Calcineurin-like phosphoesterase IUJ44_06740 PF00293 NUDIX domain IUJ44_06745 PF13667 ThiC-associated domain IUJ44_06745 PF01964 Radical SAM ThiC family IUJ44_06760 PF00892 EamA-like transporter family IUJ44_06765 PF02321 Outer membrane efflux protein IUJ44_06770 PF01895 PhoU domain IUJ44_06775 PF04362 Bacterial Fe(2+) trafficking IUJ44_06780 PF14698 Argininosuccinate lyase C-terminal IUJ44_06780 PF00206 Lyase IUJ44_06785 PF07694 5TMR of 5TMR-LYT IUJ44_06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_06785 PF06580 Histidine kinase IUJ44_06790 PF00072 Response regulator receiver domain IUJ44_06790 PF04397 LytTr DNA-binding domain IUJ44_06795 PF03900 Porphobilinogen deaminase, C-terminal domain IUJ44_06795 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IUJ44_06820 PF00816 H-NS histone family IUJ44_06835 PF00263 Bacterial type II and III secretion system protein IUJ44_06835 PF03958 Bacterial type II/III secretion system short domain IUJ44_06840 PF00498 FHA domain IUJ44_06840 PF12401 Protein of unknown function (DUF2662) IUJ44_06845 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_06850 PF04715 Anthranilate synthase component I, N terminal region IUJ44_06850 PF00425 chorismate binding enzyme IUJ44_06875 PF00009 Elongation factor Tu GTP binding domain IUJ44_06875 PF03144 Elongation factor Tu domain 2 IUJ44_06875 PF03143 Elongation factor Tu C-terminal domain IUJ44_06885 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IUJ44_06890 PF02357 Transcription termination factor nusG IUJ44_06890 PF00467 KOW motif IUJ44_06895 PF03946 Ribosomal protein L11, N-terminal domain IUJ44_06895 PF00298 Ribosomal protein L11, RNA binding domain IUJ44_06900 PF00687 Ribosomal protein L1p/L10e family IUJ44_06905 PF00466 Ribosomal protein L10 IUJ44_06910 PF16320 Ribosomal protein L7/L12 dimerisation domain IUJ44_06910 PF00542 Ribosomal protein L7/L12 C-terminal domain IUJ44_06915 PF04565 RNA polymerase Rpb2, domain 3 IUJ44_06915 PF04561 RNA polymerase Rpb2, domain 2 IUJ44_06915 PF10385 RNA polymerase beta subunit external 1 domain IUJ44_06915 PF00562 RNA polymerase Rpb2, domain 6 IUJ44_06915 PF04560 RNA polymerase Rpb2, domain 7 IUJ44_06915 PF04563 RNA polymerase beta subunit IUJ44_06920 PF04997 RNA polymerase Rpb1, domain 1 IUJ44_06920 PF04998 RNA polymerase Rpb1, domain 5 IUJ44_06920 PF05000 RNA polymerase Rpb1, domain 4 IUJ44_06920 PF04983 RNA polymerase Rpb1, domain 3 IUJ44_06920 PF00623 RNA polymerase Rpb1, domain 2 IUJ44_06945 PF03553 Na+/H+ antiporter family IUJ44_06945 PF13726 Na+-H+ antiporter family IUJ44_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_06960 PF00183 Hsp90 protein IUJ44_06975 PF01323 DSBA-like thioredoxin domain IUJ44_06985 PF00376 MerR family regulatory protein IUJ44_06985 PF09278 MerR, DNA binding IUJ44_07000 PF00108 Thiolase, N-terminal domain IUJ44_07000 PF02803 Thiolase, C-terminal domain IUJ44_07005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUJ44_07005 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_07005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUJ44_07025 PF08459 UvrC Helix-hairpin-helix N-terminal IUJ44_07025 PF02151 UvrB/uvrC motif IUJ44_07025 PF01541 GIY-YIG catalytic domain IUJ44_07035 PF01066 CDP-alcohol phosphatidyltransferase IUJ44_07040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IUJ44_07040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IUJ44_07040 PF12833 Helix-turn-helix domain IUJ44_07040 PF02805 Metal binding domain of Ada IUJ44_07065 PF13533 Biotin-lipoyl like IUJ44_07070 PF03652 Holliday junction resolvase IUJ44_07075 PF02622 Uncharacterized ACR, COG1678 IUJ44_07080 PF02463 RecF/RecN/SMC N terminal domain IUJ44_07090 PF06865 Pyrimidine/purine nucleoside phosphorylase IUJ44_07095 PF00588 SpoU rRNA Methylase family IUJ44_07095 PF08032 RNA 2'-O ribose methyltransferase substrate binding IUJ44_07105 PF01121 Dephospho-CoA kinase IUJ44_07110 PF01478 Type IV leader peptidase family IUJ44_07110 PF06750 Bacterial Peptidase A24 N-terminal domain IUJ44_07115 PF00482 Type II secretion system (T2SS), protein F IUJ44_07120 PF00437 Type II/IV secretion system protein IUJ44_07120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IUJ44_07125 PF00121 Triosephosphate isomerase IUJ44_07130 PF03840 Preprotein translocase SecG subunit IUJ44_07145 PF17384 RimP C-terminal SH3 domain IUJ44_07145 PF02576 RimP N-terminal domain IUJ44_07150 PF00575 S1 RNA binding domain IUJ44_07150 PF08529 NusA N-terminal domain IUJ44_07150 PF13184 NusA-like KH domain IUJ44_07155 PF04760 Translation initiation factor IF-2, N-terminal region IUJ44_07155 PF08364 Bacterial translation initiation factor IF-2 associated region IUJ44_07155 PF11987 Translation-initiation factor 2 IUJ44_07155 PF00009 Elongation factor Tu GTP binding domain IUJ44_07160 PF02033 Ribosome-binding factor A IUJ44_07165 PF03334 Na+/H+ antiporter subunit IUJ44_07170 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IUJ44_07175 PF01899 Na+/H+ ion antiporter subunit IUJ44_07180 PF00361 Proton-conducting membrane transporter IUJ44_07185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IUJ44_07190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IUJ44_07190 PF00361 Proton-conducting membrane transporter IUJ44_07190 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IUJ44_07190 PF13244 Domain of unknown function (DUF4040) IUJ44_07205 PF01502 Phosphoribosyl-AMP cyclohydrolase IUJ44_07210 PF01494 FAD binding domain IUJ44_07215 PF03109 ABC1 family IUJ44_07225 PF01209 ubiE/COQ5 methyltransferase family IUJ44_07235 PF03976 Polyphosphate kinase 2 (PPK2) IUJ44_07245 PF17946 RecC C-terminal domain IUJ44_07250 PF00580 UvrD/REP helicase N-terminal domain IUJ44_07250 PF12705 PD-(D/E)XK nuclease superfamily IUJ44_07250 PF13361 UvrD-like helicase C-terminal domain IUJ44_07255 PF13538 UvrD-like helicase C-terminal domain IUJ44_07260 PF00144 Beta-lactamase IUJ44_07265 PF00312 Ribosomal protein S15 IUJ44_07270 PF00575 S1 RNA binding domain IUJ44_07270 PF00013 KH domain IUJ44_07270 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IUJ44_07270 PF01138 3' exoribonuclease family, domain 1 IUJ44_07270 PF03725 3' exoribonuclease family, domain 2 IUJ44_07275 PF01544 CorA-like Mg2+ transporter protein IUJ44_07285 PF00226 DnaJ domain IUJ44_07285 PF01556 DnaJ C terminal domain IUJ44_07295 PF01430 Hsp33 protein IUJ44_07300 PF00999 Sodium/hydrogen exchanger family IUJ44_07300 PF02254 TrkA-N domain IUJ44_07305 PF00270 DEAD/DEAH box helicase IUJ44_07305 PF00271 Helicase conserved C-terminal domain IUJ44_07305 PF17764 3′ DNA-binding domain (3′BD) IUJ44_07305 PF18074 Primosomal protein N C-terminal domain IUJ44_07305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IUJ44_07310 PF00482 Type II secretion system (T2SS), protein F IUJ44_07315 PF07963 Prokaryotic N-terminal methylation motif IUJ44_07315 PF08334 Type II secretion system (T2SS), protein G IUJ44_07325 PF01588 Putative tRNA binding domain IUJ44_07330 PF00795 Carbon-nitrogen hydrolase IUJ44_07335 PF00571 CBS domain IUJ44_07335 PF03471 Transporter associated domain IUJ44_07340 PF01206 Sulfurtransferase TusA IUJ44_07355 PF01177 Asp/Glu/Hydantoin racemase IUJ44_07365 PF00762 Ferrochelatase IUJ44_07370 PF00753 Metallo-beta-lactamase superfamily IUJ44_07375 PF03884 DNA gyrase inhibitor YacG IUJ44_07385 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_07385 PF13247 4Fe-4S dicluster domain IUJ44_07385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IUJ44_07395 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IUJ44_07405 PF01197 Ribosomal protein L31 IUJ44_07410 PF03109 ABC1 family IUJ44_07420 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_07420 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_07420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_07425 PF01554 MatE IUJ44_07435 PF06969 HemN C-terminal domain IUJ44_07435 PF04055 Radical SAM superfamily IUJ44_07440 PF00106 short chain dehydrogenase IUJ44_07445 PF03466 LysR substrate binding domain IUJ44_07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_07460 PF00501 AMP-binding enzyme IUJ44_07460 PF13193 AMP-binding enzyme C-terminal domain IUJ44_07465 PF10150 Ribonuclease E/G family IUJ44_07465 PF12111 Polyribonucleotide phosphorylase C terminal IUJ44_07465 PF00575 S1 RNA binding domain IUJ44_07470 PF00849 RNA pseudouridylate synthase IUJ44_07470 PF01479 S4 domain IUJ44_07475 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_07480 PF08279 HTH domain IUJ44_07480 PF13280 WYL domain IUJ44_07485 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_07495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_07495 PF03466 LysR substrate binding domain IUJ44_07500 PF12706 Beta-lactamase superfamily domain IUJ44_07505 PF00141 Peroxidase IUJ44_07510 PF00391 PEP-utilising enzyme, mobile domain IUJ44_07510 PF01590 GAF domain IUJ44_07510 PF05524 PEP-utilising enzyme, N-terminal IUJ44_07510 PF02896 PEP-utilising enzyme, TIM barrel domain IUJ44_07515 PF00293 NUDIX domain IUJ44_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_07535 PF03466 LysR substrate binding domain IUJ44_07545 PF00330 Aconitase family (aconitate hydratase) IUJ44_07550 PF00694 Aconitase C-terminal domain IUJ44_07560 PF00180 Isocitrate/isopropylmalate dehydrogenase IUJ44_07575 PF01176 Translation initiation factor 1A / IF-1 IUJ44_07585 PF01416 tRNA pseudouridine synthase IUJ44_07605 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUJ44_07605 PF02774 Semialdehyde dehydrogenase, dimerisation domain IUJ44_07615 PF00375 Sodium:dicarboxylate symporter family IUJ44_07625 PF03279 Bacterial lipid A biosynthesis acyltransferase IUJ44_07630 PF01810 LysE type translocator IUJ44_07635 PF00005 ABC transporter IUJ44_07635 PF16326 ABC transporter C-terminal domain IUJ44_07635 PF12848 ABC transporter IUJ44_07640 PF04102 SlyX IUJ44_07645 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_07645 PF00107 Zinc-binding dehydrogenase IUJ44_07650 PF01638 HxlR-like helix-turn-helix IUJ44_07660 PF01751 Toprim domain IUJ44_07660 PF08272 Topoisomerase I zinc-ribbon-like IUJ44_07660 PF01131 DNA topoisomerase IUJ44_07660 PF01396 Topoisomerase DNA binding C4 zinc finger IUJ44_07675 PF13361 UvrD-like helicase C-terminal domain IUJ44_07675 PF00580 UvrD/REP helicase N-terminal domain IUJ44_07680 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IUJ44_07700 PF00999 Sodium/hydrogen exchanger family IUJ44_07700 PF02254 TrkA-N domain IUJ44_07705 PF00471 Ribosomal protein L33 IUJ44_07710 PF00830 Ribosomal L28 family IUJ44_07715 PF00171 Aldehyde dehydrogenase family IUJ44_07725 PF00551 Formyl transferase IUJ44_07725 PF01842 ACT domain IUJ44_07735 PF01618 MotA/TolQ/ExbB proton channel family IUJ44_07745 PF01625 Peptide methionine sulfoxide reductase IUJ44_07755 PF00186 Dihydrofolate reductase IUJ44_07760 PF00303 Thymidylate synthase IUJ44_07775 PF01790 Prolipoprotein diacylglyceryl transferase IUJ44_07845 PF00902 Sec-independent protein translocase protein (TatC) IUJ44_07850 PF02416 mttA/Hcf106 family IUJ44_07855 PF02416 mttA/Hcf106 family IUJ44_07865 PF01725 Ham1 family IUJ44_07875 PF00561 alpha/beta hydrolase fold IUJ44_07875 PF07021 Methionine biosynthesis protein MetW IUJ44_07880 PF00561 alpha/beta hydrolase fold IUJ44_07885 PF00682 HMGL-like IUJ44_07885 PF08502 LeuA allosteric (dimerisation) domain IUJ44_07890 PF13640 2OG-Fe(II) oxygenase superfamily IUJ44_07890 PF18331 PKHD-type hydroxylase C-terminal domain IUJ44_07895 PF07715 TonB-dependent Receptor Plug Domain IUJ44_07895 PF00593 TonB dependent receptor IUJ44_07900 PF05697 Bacterial trigger factor protein (TF) IUJ44_07900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUJ44_07900 PF05698 Bacterial trigger factor protein (TF) C-terminus IUJ44_07905 PF00574 Clp protease IUJ44_07910 PF07724 AAA domain (Cdc48 subfamily) IUJ44_07910 PF10431 C-terminal, D2-small domain, of ClpB protein IUJ44_07910 PF06689 ClpX C4-type zinc finger IUJ44_07925 PF05681 Fumarate hydratase (Fumerase) IUJ44_07925 PF05683 Fumarase C-terminus IUJ44_07930 PF07085 DRTGG domain IUJ44_07930 PF01515 Phosphate acetyl/butaryl transferase IUJ44_07935 PF00871 Acetokinase family IUJ44_07940 PF00920 Dehydratase family IUJ44_07945 PF01081 KDPG and KHG aldolase IUJ44_07950 PF02447 GntP family permease IUJ44_07955 PF01202 Shikimate kinase IUJ44_07960 PF00171 Aldehyde dehydrogenase family IUJ44_07965 PF00171 Aldehyde dehydrogenase family IUJ44_07970 PF00561 alpha/beta hydrolase fold IUJ44_07980 PF00933 Glycosyl hydrolase family 3 N terminal domain IUJ44_07985 PF00595 PDZ domain IUJ44_07985 PF03572 Peptidase family S41 IUJ44_07985 PF17804 Tail specific protease N-terminal domain IUJ44_07985 PF11818 C-terminal domain of tail specific protease (DUF3340) IUJ44_07990 PF13439 Glycosyltransferase Family 4 IUJ44_07990 PF00534 Glycosyl transferases group 1 IUJ44_07995 PF01569 PAP2 superfamily IUJ44_08000 PF04384 Iron-sulphur cluster assembly IUJ44_08005 PF00334 Nucleoside diphosphate kinase IUJ44_08010 PF04055 Radical SAM superfamily IUJ44_08020 PF13464 Domain of unknown function (DUF4115) IUJ44_08025 PF04551 GcpE protein IUJ44_08030 PF03129 Anticodon binding domain IUJ44_08030 PF13393 Histidyl-tRNA synthetase IUJ44_08040 PF13360 PQQ-like domain IUJ44_08045 PF01926 50S ribosome-binding GTPase IUJ44_08045 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IUJ44_08055 PF02556 Preprotein translocase subunit SecB IUJ44_08060 PF00462 Glutaredoxin IUJ44_08070 PF03193 RsgA GTPase IUJ44_08075 PF00929 Exonuclease IUJ44_08090 PF02321 Outer membrane efflux protein IUJ44_08095 PF02687 FtsX-like permease family IUJ44_08095 PF00005 ABC transporter IUJ44_08095 PF12704 MacB-like periplasmic core domain IUJ44_08100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_08115 PF08264 Anticodon-binding domain of tRNA IUJ44_08115 PF00133 tRNA synthetases class I (I, L, M and V) IUJ44_08115 PF13603 Leucyl-tRNA synthetase, Domain 2 IUJ44_08115 PF09334 tRNA synthetases class I (M) IUJ44_08125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUJ44_08125 PF00205 Thiamine pyrophosphate enzyme, central domain IUJ44_08125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUJ44_08130 PF10369 Small subunit of acetolactate synthase IUJ44_08135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IUJ44_08135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IUJ44_08140 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_08140 PF03707 Bacterial signalling protein N terminal repeat IUJ44_08140 PF00563 EAL domain IUJ44_08160 PF00009 Elongation factor Tu GTP binding domain IUJ44_08160 PF03144 Elongation factor Tu domain 2 IUJ44_08160 PF16658 Class II release factor RF3, C-terminal domain IUJ44_08175 PF01026 TatD related DNase IUJ44_08180 PF00694 Aconitase C-terminal domain IUJ44_08180 PF00330 Aconitase family (aconitate hydratase) IUJ44_08190 PF00899 ThiF family IUJ44_08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_08200 PF03466 LysR substrate binding domain IUJ44_08210 PF01207 Dihydrouridine synthase (Dus) IUJ44_08215 PF07690 Major Facilitator Superfamily IUJ44_08225 PF00892 EamA-like transporter family IUJ44_08230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IUJ44_08230 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IUJ44_08235 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IUJ44_08240 PF02233 NAD(P) transhydrogenase beta subunit IUJ44_08245 PF00106 short chain dehydrogenase IUJ44_08255 PF01261 Xylose isomerase-like TIM barrel IUJ44_08260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IUJ44_08260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUJ44_08265 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_08270 PF00672 HAMP domain IUJ44_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_08270 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_08270 PF01627 Hpt domain IUJ44_08270 PF00072 Response regulator receiver domain IUJ44_08270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUJ44_08275 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_08285 PF05958 tRNA (Uracil-5-)-methyltransferase IUJ44_08290 PF04607 Region found in RelA / SpoT proteins IUJ44_08290 PF02824 TGS domain IUJ44_08290 PF13291 ACT domain IUJ44_08300 PF03819 MazG nucleotide pyrophosphohydrolase domain IUJ44_08310 PF01743 Poly A polymerase head domain IUJ44_08310 PF12627 Probable RNA and SrmB- binding site of polymerase A IUJ44_08310 PF12626 Polymerase A arginine-rich C-terminus IUJ44_08315 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IUJ44_08320 PF02548 Ketopantoate hydroxymethyltransferase IUJ44_08325 PF02569 Pantoate-beta-alanine ligase IUJ44_08330 PF03668 P-loop ATPase protein family IUJ44_08335 PF00381 PTS HPr component phosphorylation site IUJ44_08340 PF04751 Protein of unknown function (DUF615) IUJ44_08345 PF00501 AMP-binding enzyme IUJ44_08345 PF13193 AMP-binding enzyme C-terminal domain IUJ44_08350 PF03129 Anticodon binding domain IUJ44_08350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUJ44_08350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IUJ44_08350 PF02824 TGS domain IUJ44_08355 PF00707 Translation initiation factor IF-3, C-terminal domain IUJ44_08355 PF05198 Translation initiation factor IF-3, N-terminal domain IUJ44_08360 PF00043 Glutathione S-transferase, C-terminal domain IUJ44_08360 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_08365 PF09335 SNARE associated Golgi protein IUJ44_08370 PF07690 Major Facilitator Superfamily IUJ44_08375 PF01632 Ribosomal protein L35 IUJ44_08380 PF00453 Ribosomal protein L20 IUJ44_08400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IUJ44_08400 PF01409 tRNA synthetases class II core domain (F) IUJ44_08405 PF03484 tRNA synthetase B5 domain IUJ44_08405 PF03147 Ferredoxin-fold anticodon binding domain IUJ44_08405 PF01588 Putative tRNA binding domain IUJ44_08405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IUJ44_08405 PF03483 B3/4 domain IUJ44_08410 PF00216 Bacterial DNA-binding protein IUJ44_08425 PF07497 Rho termination factor, RNA-binding domain IUJ44_08425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUJ44_08425 PF07498 Rho termination factor, N-terminal domain IUJ44_08430 PF00085 Thioredoxin IUJ44_08435 PF02541 Ppx/GppA phosphatase family IUJ44_08440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IUJ44_08445 PF01171 PP-loop family IUJ44_08445 PF09179 TilS substrate binding domain IUJ44_08445 PF11734 TilS substrate C-terminal domain IUJ44_08450 PF03807 NADP oxidoreductase coenzyme F420-dependent IUJ44_08450 PF14748 Pyrroline-5-carboxylate reductase dimerisation IUJ44_08455 PF02325 YGGT family IUJ44_08460 PF01367 5'-3' exonuclease, C-terminal SAM fold IUJ44_08460 PF01612 3'-5' exonuclease IUJ44_08460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IUJ44_08460 PF00476 DNA polymerase family A IUJ44_08480 PF00437 Type II/IV secretion system protein IUJ44_08485 PF02566 OsmC-like protein IUJ44_08490 PF01047 MarR family IUJ44_08500 PF00795 Carbon-nitrogen hydrolase IUJ44_08545 PF04552 Sigma-54, DNA binding domain IUJ44_08545 PF04963 Sigma-54 factor, core binding domain IUJ44_08545 PF00309 Sigma-54 factor, Activator interacting domain (AID) IUJ44_08550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IUJ44_08555 PF01722 BolA-like protein IUJ44_08560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IUJ44_08565 PF01634 ATP phosphoribosyltransferase IUJ44_08570 PF00815 Histidinol dehydrogenase IUJ44_08575 PF00155 Aminotransferase class I and II IUJ44_08580 PF04715 Anthranilate synthase component I, N terminal region IUJ44_08580 PF00425 chorismate binding enzyme IUJ44_08620 PF00293 NUDIX domain IUJ44_08625 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_08630 PF00814 Glycoprotease family IUJ44_08635 PF04445 Putative SAM-dependent methyltransferase IUJ44_08645 PF00756 Putative esterase IUJ44_08655 PF00834 Ribulose-phosphate 3 epimerase family IUJ44_08670 PF07732 Multicopper oxidase IUJ44_08670 PF00394 Multicopper oxidase IUJ44_08670 PF07731 Multicopper oxidase IUJ44_08685 PF00893 Small Multidrug Resistance protein IUJ44_08690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IUJ44_08690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IUJ44_08695 PF01960 ArgJ family IUJ44_08700 PF02445 Quinolinate synthetase A protein IUJ44_08725 PF00962 Adenosine/AMP deaminase IUJ44_08730 PF00107 Zinc-binding dehydrogenase IUJ44_08730 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_08735 PF03466 LysR substrate binding domain IUJ44_08740 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_08740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_08740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_08745 PF07690 Major Facilitator Superfamily IUJ44_08750 PF02515 CoA-transferase family III IUJ44_08755 PF00440 Bacterial regulatory proteins, tetR family IUJ44_08755 PF17932 Tetracyclin repressor-like, C-terminal domain IUJ44_08770 PF00890 FAD binding domain IUJ44_08770 PF14537 Cytochrome c3 IUJ44_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_08775 PF03466 LysR substrate binding domain IUJ44_08785 PF07690 Major Facilitator Superfamily IUJ44_08790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_08790 PF03466 LysR substrate binding domain IUJ44_08795 PF01810 LysE type translocator IUJ44_08800 PF03466 LysR substrate binding domain IUJ44_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_08810 PF08267 Cobalamin-independent synthase, N-terminal domain IUJ44_08810 PF01717 Cobalamin-independent synthase, Catalytic domain IUJ44_08815 PF01613 Flavin reductase like domain IUJ44_08855 PF17074 Darcynin, domain of unknown function IUJ44_08870 PF00268 Ribonucleotide reductase, small chain IUJ44_08880 PF00317 Ribonucleotide reductase, all-alpha domain IUJ44_08880 PF03477 ATP cone domain IUJ44_08880 PF02867 Ribonucleotide reductase, barrel domain IUJ44_08890 PF00072 Response regulator receiver domain IUJ44_08890 PF00486 Transcriptional regulatory protein, C terminal IUJ44_08895 PF00672 HAMP domain IUJ44_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_08895 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_08905 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_08905 PF17151 Periplasmic sensor domain IUJ44_08910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IUJ44_08915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IUJ44_08920 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IUJ44_08920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IUJ44_08930 PF10531 SLBB domain IUJ44_08930 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IUJ44_08930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IUJ44_08935 PF00384 Molybdopterin oxidoreductase IUJ44_08935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IUJ44_08935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IUJ44_08940 PF00146 NADH dehydrogenase IUJ44_08945 PF12838 4Fe-4S dicluster domain IUJ44_08950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IUJ44_08955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IUJ44_08960 PF00361 Proton-conducting membrane transporter IUJ44_08960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IUJ44_08965 PF00361 Proton-conducting membrane transporter IUJ44_08970 PF00361 Proton-conducting membrane transporter IUJ44_08980 PF00313 'Cold-shock' DNA-binding domain IUJ44_08985 PF03466 LysR substrate binding domain IUJ44_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_08990 PF00175 Oxidoreductase NAD-binding domain IUJ44_08990 PF00970 Oxidoreductase FAD-binding domain IUJ44_09005 PF05552 Conserved TM helix IUJ44_09020 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_09025 PF13533 Biotin-lipoyl like IUJ44_09050 PF09334 tRNA synthetases class I (M) IUJ44_09050 PF01588 Putative tRNA binding domain IUJ44_09060 PF10609 NUBPL iron-transfer P-loop NTPase IUJ44_09065 PF01048 Phosphorylase superfamily IUJ44_09080 PF00692 dUTPase IUJ44_09110 PF01207 Dihydrouridine synthase (Dus) IUJ44_09120 PF02978 Signal peptide binding domain IUJ44_09120 PF00448 SRP54-type protein, GTPase domain IUJ44_09120 PF02881 SRP54-type protein, helical bundle domain IUJ44_09125 PF03309 Type III pantothenate kinase IUJ44_09135 PF01925 Sulfite exporter TauE/SafE IUJ44_09145 PF06470 SMC proteins Flexible Hinge Domain IUJ44_09145 PF02463 RecF/RecN/SMC N terminal domain IUJ44_09155 PF00533 BRCA1 C Terminus (BRCT) domain IUJ44_09155 PF01653 NAD-dependent DNA ligase adenylation domain IUJ44_09155 PF03120 NAD-dependent DNA ligase OB-fold domain IUJ44_09155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IUJ44_09155 PF12826 Helix-hairpin-helix motif IUJ44_09160 PF00210 Ferritin-like domain IUJ44_09165 PF07690 Major Facilitator Superfamily IUJ44_09170 PF00982 Glycosyltransferase family 20 IUJ44_09175 PF02358 Trehalose-phosphatase IUJ44_09180 PF08241 Methyltransferase domain IUJ44_09180 PF12697 Alpha/beta hydrolase family IUJ44_09185 PF00202 Aminotransferase class-III IUJ44_09185 PF06968 Biotin and Thiamin Synthesis associated domain IUJ44_09185 PF04055 Radical SAM superfamily IUJ44_09190 PF00155 Aminotransferase class I and II IUJ44_09205 PF00849 RNA pseudouridylate synthase IUJ44_09205 PF01479 S4 domain IUJ44_09210 PF04079 Segregation and condensation complex subunit ScpB IUJ44_09215 PF02616 Segregation and condensation protein ScpA IUJ44_09220 PF01300 Telomere recombination IUJ44_09225 PF04315 Elongation factor P hydroxylase IUJ44_09230 PF02620 Large ribosomal RNA subunit accumulation protein YceD IUJ44_09235 PF01783 Ribosomal L32p protein family IUJ44_09240 PF00698 Acyl transferase domain IUJ44_09250 PF00550 Phosphopantetheine attachment site IUJ44_09255 PF04972 BON domain IUJ44_09255 PF01476 LysM domain IUJ44_09260 PF08543 Phosphomethylpyrimidine kinase IUJ44_09260 PF03070 TENA/THI-4/PQQC family IUJ44_09260 PF02581 Thiamine monophosphate synthase IUJ44_09270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IUJ44_09285 PF02261 Aspartate decarboxylase IUJ44_09290 PF01195 Peptidyl-tRNA hydrolase IUJ44_09295 PF01386 Ribosomal L25p family IUJ44_09300 PF14572 Phosphoribosyl synthetase-associated domain IUJ44_09300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IUJ44_09325 PF08544 GHMP kinases C terminal IUJ44_09325 PF00288 GHMP kinases N terminal domain IUJ44_09330 PF03550 Outer membrane lipoprotein LolB IUJ44_09340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IUJ44_09340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IUJ44_09340 PF01488 Shikimate / quinate 5-dehydrogenase IUJ44_09345 PF10410 DnaB-helicase binding domain of primase IUJ44_09345 PF08278 DNA primase DnaG DnaB-binding IUJ44_09345 PF01807 CHC2 zinc finger IUJ44_09345 PF08275 DNA primase catalytic core, N-terminal domain IUJ44_09350 PF13525 Outer membrane lipoprotein IUJ44_09355 PF00849 RNA pseudouridylate synthase IUJ44_09355 PF01479 S4 domain IUJ44_09360 PF02578 Multi-copper polyphenol oxidoreductase laccase IUJ44_09365 PF03358 NADPH-dependent FMN reductase IUJ44_09370 PF01668 SmpB protein IUJ44_09375 PF01467 Cytidylyltransferase-like IUJ44_09380 PF00037 4Fe-4S binding domain IUJ44_09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_09400 PF03466 LysR substrate binding domain IUJ44_09405 PF00180 Isocitrate/isopropylmalate dehydrogenase IUJ44_09410 PF02028 BCCT, betaine/carnitine/choline family transporter IUJ44_09415 PF07859 alpha/beta hydrolase fold IUJ44_09420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IUJ44_09420 PF00355 Rieske [2Fe-2S] domain IUJ44_09425 PF00171 Aldehyde dehydrogenase family IUJ44_09430 PF00970 Oxidoreductase FAD-binding domain IUJ44_09430 PF00175 Oxidoreductase NAD-binding domain IUJ44_09430 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_09445 PF00795 Carbon-nitrogen hydrolase IUJ44_09445 PF02540 NAD synthase IUJ44_09455 PF02678 Pirin IUJ44_09455 PF05726 Pirin C-terminal cupin domain IUJ44_09460 PF03653 Uncharacterised protein family (UPF0093) IUJ44_09465 PF02801 Beta-ketoacyl synthase, C-terminal domain IUJ44_09465 PF00109 Beta-ketoacyl synthase, N-terminal domain IUJ44_09475 PF00164 Ribosomal protein S12/S23 IUJ44_09480 PF00177 Ribosomal protein S7p/S5e IUJ44_09485 PF03144 Elongation factor Tu domain 2 IUJ44_09485 PF00009 Elongation factor Tu GTP binding domain IUJ44_09485 PF03764 Elongation factor G, domain IV IUJ44_09485 PF14492 Elongation Factor G, domain II IUJ44_09485 PF00679 Elongation factor G C-terminus IUJ44_09490 PF03143 Elongation factor Tu C-terminal domain IUJ44_09490 PF03144 Elongation factor Tu domain 2 IUJ44_09490 PF00009 Elongation factor Tu GTP binding domain IUJ44_09505 PF00583 Acetyltransferase (GNAT) family IUJ44_09510 PF04377 Arginine-tRNA-protein transferase, C terminus IUJ44_09510 PF04376 Arginine-tRNA-protein transferase, N terminus IUJ44_09515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IUJ44_09520 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_09525 PF01580 FtsK/SpoIIIE family IUJ44_09525 PF17854 FtsK alpha domain IUJ44_09525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IUJ44_09525 PF09397 Ftsk gamma domain IUJ44_09530 PF01810 LysE type translocator IUJ44_09540 PF03776 Septum formation topological specificity factor MinE IUJ44_09545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IUJ44_09550 PF03775 Septum formation inhibitor MinC, C-terminal domain IUJ44_09560 PF01553 Acyltransferase IUJ44_09565 PF00691 OmpA family IUJ44_09565 PF13488 Glycine zipper IUJ44_09570 PF13361 UvrD-like helicase C-terminal domain IUJ44_09570 PF00580 UvrD/REP helicase N-terminal domain IUJ44_09575 PF00692 dUTPase IUJ44_09580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUJ44_09580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUJ44_09580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUJ44_09580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUJ44_09585 PF00696 Amino acid kinase family IUJ44_09595 PF13230 Glutamine amidotransferases class-II IUJ44_09600 PF01814 Hemerythrin HHE cation binding domain IUJ44_09610 PF03658 RnfH family Ubiquitin IUJ44_09615 PF04355 SmpA / OmlA family IUJ44_09620 PF01475 Ferric uptake regulator family IUJ44_09625 PF00437 Type II/IV secretion system protein IUJ44_09630 PF00437 Type II/IV secretion system protein IUJ44_09635 PF01168 Alanine racemase, N-terminal domain IUJ44_09645 PF12320 Type 5 capsule protein repressor C-terminal domain IUJ44_09645 PF00149 Calcineurin-like phosphoesterase IUJ44_09665 PF01370 NAD dependent epimerase/dehydratase family IUJ44_09665 PF08338 Domain of unknown function (DUF1731) IUJ44_09670 PF01266 FAD dependent oxidoreductase IUJ44_09675 PF00490 Delta-aminolevulinic acid dehydratase IUJ44_09680 PF03061 Thioesterase superfamily IUJ44_09685 PF13533 Biotin-lipoyl like IUJ44_09690 PF07690 Major Facilitator Superfamily IUJ44_09705 PF00589 Phage integrase family IUJ44_09705 PF13356 Arm DNA-binding domain IUJ44_09750 PF00436 Single-strand binding protein family IUJ44_09790 PF01867 CRISPR associated protein Cas1 IUJ44_09800 PF09615 CRISPR-associated protein (Cas_Csy3) IUJ44_09820 PF18019 HD domain IUJ44_09880 PF00083 Sugar (and other) transporter IUJ44_09885 PF00701 Dihydrodipicolinate synthetase family IUJ44_09900 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IUJ44_09900 PF04717 Type VI secretion system, phage-baseplate injector IUJ44_09900 PF13296 Putative type VI secretion system Rhs element Vgr IUJ44_09930 PF13520 Amino acid permease IUJ44_09935 PF02574 Homocysteine S-methyltransferase IUJ44_09945 PF06039 Malate:quinone oxidoreductase (Mqo) IUJ44_09950 PF05199 GMC oxidoreductase IUJ44_09950 PF00732 GMC oxidoreductase IUJ44_09955 PF00171 Aldehyde dehydrogenase family IUJ44_09960 PF13977 BetI-type transcriptional repressor, C-terminal IUJ44_09960 PF00440 Bacterial regulatory proteins, tetR family IUJ44_09965 PF02028 BCCT, betaine/carnitine/choline family transporter IUJ44_09970 PF02028 BCCT, betaine/carnitine/choline family transporter IUJ44_09980 PF03061 Thioesterase superfamily IUJ44_09990 PF07683 Cobalamin synthesis protein cobW C-terminal domain IUJ44_09990 PF02492 CobW/HypB/UreG, nucleotide-binding domain IUJ44_09995 PF00375 Sodium:dicarboxylate symporter family IUJ44_10000 PF07152 YaeQ protein IUJ44_10005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUJ44_10010 PF14883 Hypothetical glycosyl hydrolase family 13 IUJ44_10010 PF01522 Polysaccharide deacetylase IUJ44_10015 PF00535 Glycosyl transferase family 2 IUJ44_10025 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_10040 PF01614 Bacterial transcriptional regulator IUJ44_10040 PF09339 IclR helix-turn-helix domain IUJ44_10045 PF00355 Rieske [2Fe-2S] domain IUJ44_10055 PF00355 Rieske [2Fe-2S] domain IUJ44_10065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUJ44_10070 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_10070 PF14759 Reductase C-terminal IUJ44_10075 PF07690 Major Facilitator Superfamily IUJ44_10085 PF12697 Alpha/beta hydrolase family IUJ44_10095 PF01958 Domain of unknown function DUF108 IUJ44_10095 PF03447 Homoserine dehydrogenase, NAD binding domain IUJ44_10100 PF00171 Aldehyde dehydrogenase family IUJ44_10105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUJ44_10105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUJ44_10105 PF00205 Thiamine pyrophosphate enzyme, central domain IUJ44_10115 PF07690 Major Facilitator Superfamily IUJ44_10120 PF01327 Polypeptide deformylase IUJ44_10125 PF04960 Glutaminase IUJ44_10130 PF02311 AraC-like ligand binding domain IUJ44_10130 PF12833 Helix-turn-helix domain IUJ44_10135 PF07690 Major Facilitator Superfamily IUJ44_10140 PF01263 Aldose 1-epimerase IUJ44_10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_10150 PF03466 LysR substrate binding domain IUJ44_10160 PF07690 Major Facilitator Superfamily IUJ44_10165 PF00456 Transketolase, thiamine diphosphate binding domain IUJ44_10170 PF02779 Transketolase, pyrimidine binding domain IUJ44_10170 PF02780 Transketolase, C-terminal domain IUJ44_10175 PF02574 Homocysteine S-methyltransferase IUJ44_10175 PF00809 Pterin binding enzyme IUJ44_10175 PF02965 Vitamin B12 dependent methionine synthase, activation domain IUJ44_10175 PF02310 B12 binding domain IUJ44_10175 PF02607 B12 binding domain IUJ44_10180 PF01384 Phosphate transporter family IUJ44_10185 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_10200 PF03781 Sulfatase-modifying factor enzyme 1 IUJ44_10205 PF00884 Sulfatase IUJ44_10215 PF01521 Iron-sulphur cluster biosynthesis IUJ44_10215 PF01106 NifU-like domain IUJ44_10220 PF07715 TonB-dependent Receptor Plug Domain IUJ44_10220 PF00593 TonB dependent receptor IUJ44_10230 PF00561 alpha/beta hydrolase fold IUJ44_10235 PF00484 Carbonic anhydrase IUJ44_10240 PF13472 GDSL-like Lipase/Acylhydrolase family IUJ44_10245 PF00005 ABC transporter IUJ44_10255 PF01694 Rhomboid family IUJ44_10260 PF00912 Transglycosylase IUJ44_10265 PF02503 Polyphosphate kinase middle domain IUJ44_10265 PF13090 Polyphosphate kinase C-terminal domain 2 IUJ44_10265 PF17941 Polyphosphate kinase C-terminal domain 1 IUJ44_10265 PF13089 Polyphosphate kinase N-terminal domain IUJ44_10280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_10280 PF03466 LysR substrate binding domain IUJ44_10285 PF00561 alpha/beta hydrolase fold IUJ44_10290 PF18113 Rubredoxin binding C-terminal domain IUJ44_10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_10295 PF00301 Rubredoxin IUJ44_10310 PF01336 OB-fold nucleic acid binding domain IUJ44_10310 PF00152 tRNA synthetases class II (D, K and N) IUJ44_10315 PF14052 Capsule assembly protein Wzi IUJ44_10325 PF01507 Phosphoadenosine phosphosulfate reductase family IUJ44_10330 PF00009 Elongation factor Tu GTP binding domain IUJ44_10345 PF03600 Citrate transporter IUJ44_10350 PF00571 CBS domain IUJ44_10350 PF03471 Transporter associated domain IUJ44_10350 PF01595 Cyclin M transmembrane N-terminal domain IUJ44_10355 PF03466 LysR substrate binding domain IUJ44_10355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_10360 PF00463 Isocitrate lyase family IUJ44_10375 PF01774 UreD urease accessory protein IUJ44_10380 PF00547 Urease, gamma subunit IUJ44_10385 PF00699 Urease beta subunit IUJ44_10390 PF01979 Amidohydrolase family IUJ44_10390 PF00449 Urease alpha-subunit, N-terminal domain IUJ44_10395 PF05194 UreE urease accessory protein, C-terminal domain IUJ44_10395 PF02814 UreE urease accessory protein, N-terminal domain IUJ44_10400 PF01730 UreF IUJ44_10405 PF02492 CobW/HypB/UreG, nucleotide-binding domain IUJ44_10420 PF00905 Penicillin binding protein transpeptidase domain IUJ44_10420 PF03717 Penicillin-binding Protein dimerisation domain IUJ44_10435 PF05191 Adenylate kinase, active site lid IUJ44_10445 PF00633 Helix-hairpin-helix motif IUJ44_10445 PF00730 HhH-GPD superfamily base excision DNA repair protein IUJ44_10445 PF10576 Iron-sulfur binding domain of endonuclease III IUJ44_10450 PF04060 Putative Fe-S cluster IUJ44_10455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IUJ44_10455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IUJ44_10465 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IUJ44_10470 PF02590 Predicted SPOUT methyltransferase IUJ44_10475 PF05362 Lon protease (S16) C-terminal proteolytic domain IUJ44_10475 PF00004 ATPase family associated with various cellular activities (AAA) IUJ44_10475 PF02190 ATP-dependent protease La (LON) substrate-binding domain IUJ44_10480 PF13018 Extended Signal Peptide of Type V secretion system IUJ44_10480 PF03895 YadA-like membrane anchor domain IUJ44_10480 PF05658 Head domain of trimeric autotransporter adhesin IUJ44_10480 PF05662 Coiled stalk of trimeric autotransporter adhesin IUJ44_10485 PF04355 SmpA / OmlA family IUJ44_10485 PF00691 OmpA family IUJ44_10490 PF01812 5-formyltetrahydrofolate cyclo-ligase family IUJ44_10815 PF01476 LysM domain IUJ44_10815 PF08525 Opacity-associated protein A N-terminal motif IUJ44_10815 PF01551 Peptidase family M23 IUJ44_10860 PF00884 Sulfatase IUJ44_10860 PF08019 Phosphoethanolamine transferase EptA/EptB IUJ44_10900 PF05195 Aminopeptidase P, N-terminal domain IUJ44_10900 PF00557 Metallopeptidase family M24 IUJ44_10905 PF01494 FAD binding domain IUJ44_10910 PF01494 FAD binding domain IUJ44_10920 PF13411 MerR HTH family regulatory protein IUJ44_10930 PF01810 LysE type translocator IUJ44_10935 PF03466 LysR substrate binding domain IUJ44_10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_10945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUJ44_10950 PF02021 Uncharacterised protein family UPF0102 IUJ44_10955 PF04972 BON domain IUJ44_10965 PF00293 NUDIX domain IUJ44_10965 PF09297 NADH pyrophosphatase zinc ribbon domain IUJ44_10975 PF00929 Exonuclease IUJ44_10980 PF01476 LysM domain IUJ44_10980 PF01464 Transglycosylase SLT domain IUJ44_10980 PF01476 LysM domain IUJ44_10980 PF01464 Transglycosylase SLT domain IUJ44_10985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IUJ44_10990 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_10995 PF12911 N-terminal TM domain of oligopeptide transport permease C IUJ44_10995 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_11000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IUJ44_11000 PF00005 ABC transporter IUJ44_11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_11005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUJ44_11010 PF00593 TonB dependent receptor IUJ44_11010 PF07715 TonB-dependent Receptor Plug Domain IUJ44_11020 PF00929 Exonuclease IUJ44_11025 PF01979 Amidohydrolase family IUJ44_11030 PF00563 EAL domain IUJ44_11030 PF01590 GAF domain IUJ44_11030 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_11030 PF00360 Phytochrome region IUJ44_11035 PF00764 Arginosuccinate synthase IUJ44_11040 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_11040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUJ44_11050 PF00589 Phage integrase family IUJ44_11050 PF13356 Arm DNA-binding domain IUJ44_11125 PF13411 MerR HTH family regulatory protein IUJ44_11135 PF01252 Signal peptidase (SPase) II IUJ44_11145 PF09278 MerR, DNA binding IUJ44_11145 PF00376 MerR family regulatory protein IUJ44_11150 PF02411 MerT mercuric transport protein IUJ44_11155 PF00403 Heavy-metal-associated domain IUJ44_11160 PF03203 MerC mercury resistance protein IUJ44_11165 PF00403 Heavy-metal-associated domain IUJ44_11165 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_11165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUJ44_11170 PF13411 MerR HTH family regulatory protein IUJ44_11185 PF02661 Fic/DOC family IUJ44_11195 PF02384 N-6 DNA Methylase IUJ44_11220 PF00440 Bacterial regulatory proteins, tetR family IUJ44_11235 PF05987 Bacterial protein of unknown function (DUF898) IUJ44_11240 PF03180 NLPA lipoprotein IUJ44_11255 PF03783 Curli production assembly/transport component CsgG IUJ44_11265 PF05643 Putative bacterial lipoprotein (DUF799) IUJ44_11275 PF00324 Amino acid permease IUJ44_11280 PF01266 FAD dependent oxidoreductase IUJ44_11285 PF00324 Amino acid permease IUJ44_11295 PF00392 Bacterial regulatory proteins, gntR family IUJ44_11295 PF07729 FCD domain IUJ44_11305 PF00171 Aldehyde dehydrogenase family IUJ44_11315 PF00202 Aminotransferase class-III IUJ44_11325 PF00324 Amino acid permease IUJ44_11350 PF00171 Aldehyde dehydrogenase family IUJ44_11355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IUJ44_11355 PF12833 Helix-turn-helix domain IUJ44_11360 PF00892 EamA-like transporter family IUJ44_11365 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IUJ44_11365 PF08666 SAF domain IUJ44_11370 PF07690 Major Facilitator Superfamily IUJ44_11375 PF13378 Enolase C-terminal domain-like IUJ44_11380 PF00701 Dihydrodipicolinate synthetase family IUJ44_11385 PF00171 Aldehyde dehydrogenase family IUJ44_11390 PF07729 FCD domain IUJ44_11390 PF00392 Bacterial regulatory proteins, gntR family IUJ44_11395 PF07519 Tannase and feruloyl esterase IUJ44_11410 PF03573 outer membrane porin, OprD family IUJ44_11415 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_11415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_11415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_11425 PF00171 Aldehyde dehydrogenase family IUJ44_11430 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_11435 PF07690 Major Facilitator Superfamily IUJ44_11450 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_11450 PF00175 Oxidoreductase NAD-binding domain IUJ44_11455 PF00355 Rieske [2Fe-2S] domain IUJ44_11460 PF07690 Major Facilitator Superfamily IUJ44_11465 PF03573 outer membrane porin, OprD family IUJ44_11470 PF05199 GMC oxidoreductase IUJ44_11475 PF07859 alpha/beta hydrolase fold IUJ44_11480 PF00106 short chain dehydrogenase IUJ44_11485 PF00743 Flavin-binding monooxygenase-like IUJ44_11490 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IUJ44_11490 PF12833 Helix-turn-helix domain IUJ44_11495 PF04072 Leucine carboxyl methyltransferase IUJ44_11500 PF00743 Flavin-binding monooxygenase-like IUJ44_11505 PF00106 short chain dehydrogenase IUJ44_11515 PF17932 Tetracyclin repressor-like, C-terminal domain IUJ44_11515 PF00440 Bacterial regulatory proteins, tetR family IUJ44_11520 PF02678 Pirin IUJ44_11520 PF17954 Quercetinase C-terminal cupin domain IUJ44_11530 PF00106 short chain dehydrogenase IUJ44_11535 PF00743 Flavin-binding monooxygenase-like IUJ44_11545 PF00860 Permease family IUJ44_11550 PF00962 Adenosine/AMP deaminase IUJ44_11555 PF01292 Prokaryotic cytochrome b561 IUJ44_11565 PF01351 Ribonuclease HII IUJ44_11570 PF02599 Global regulator protein family IUJ44_11575 PF01842 ACT domain IUJ44_11575 PF13840 ACT domain IUJ44_11575 PF00696 Amino acid kinase family IUJ44_11630 PF00717 Peptidase S24-like IUJ44_11630 PF01726 LexA DNA binding domain IUJ44_11635 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT IUJ44_11650 PF00145 C-5 cytosine-specific DNA methylase IUJ44_11720 PF06381 Protein of unknown function (DUF1073) IUJ44_11740 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) IUJ44_11855 PF13438 Domain of unknown function (DUF4113) IUJ44_11855 PF00817 impB/mucB/samB family IUJ44_11855 PF11799 impB/mucB/samB family C-terminal domain IUJ44_11860 PF00717 Peptidase S24-like IUJ44_11865 PF13356 Arm DNA-binding domain IUJ44_11865 PF00589 Phage integrase family IUJ44_11870 PF01411 tRNA synthetases class II (A) IUJ44_11870 PF02272 DHHA1 domain IUJ44_11870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IUJ44_11875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IUJ44_11875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IUJ44_11880 PF13393 Histidyl-tRNA synthetase IUJ44_11885 PF00709 Adenylosuccinate synthetase IUJ44_11900 PF00248 Aldo/keto reductase family IUJ44_11905 PF00027 Cyclic nucleotide-binding domain IUJ44_11905 PF13545 Crp-like helix-turn-helix domain IUJ44_11915 PF02566 OsmC-like protein IUJ44_11930 PF10431 C-terminal, D2-small domain, of ClpB protein IUJ44_11930 PF02861 Clp amino terminal domain, pathogenicity island component IUJ44_11930 PF17871 AAA lid domain IUJ44_11930 PF00004 ATPase family associated with various cellular activities (AAA) IUJ44_11930 PF07724 AAA domain (Cdc48 subfamily) IUJ44_11945 PF10672 S-adenosylmethionine-dependent methyltransferase IUJ44_11945 PF02926 THUMP domain IUJ44_11945 PF01170 Putative RNA methylase family UPF0020 IUJ44_11955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IUJ44_11955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IUJ44_11960 PF01979 Amidohydrolase family IUJ44_11965 PF13488 Glycine zipper IUJ44_11965 PF00691 OmpA family IUJ44_11975 PF00043 Glutathione S-transferase, C-terminal domain IUJ44_11975 PF13417 Glutathione S-transferase, N-terminal domain IUJ44_11995 PF02390 Putative methyltransferase IUJ44_12005 PF00043 Glutathione S-transferase, C-terminal domain IUJ44_12005 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_12015 PF13192 Thioredoxin domain IUJ44_12015 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_12035 PF00578 AhpC/TSA family IUJ44_12035 PF10417 C-terminal domain of 1-Cys peroxiredoxin IUJ44_12040 PF00270 DEAD/DEAH box helicase IUJ44_12040 PF11898 Domain of unknown function (DUF3418) IUJ44_12040 PF04408 Helicase associated domain (HA2) IUJ44_12040 PF00271 Helicase conserved C-terminal domain IUJ44_12040 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IUJ44_12045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IUJ44_12045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IUJ44_12055 PF07690 Major Facilitator Superfamily IUJ44_12060 PF03594 Benzoate membrane transport protein IUJ44_12065 PF00106 short chain dehydrogenase IUJ44_12070 PF00970 Oxidoreductase FAD-binding domain IUJ44_12070 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_12070 PF00175 Oxidoreductase NAD-binding domain IUJ44_12075 PF00866 Ring hydroxylating beta subunit IUJ44_12080 PF00355 Rieske [2Fe-2S] domain IUJ44_12080 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IUJ44_12085 PF03466 LysR substrate binding domain IUJ44_12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_12095 PF00403 Heavy-metal-associated domain IUJ44_12100 PF09278 MerR, DNA binding IUJ44_12100 PF00376 MerR family regulatory protein IUJ44_12135 PF02601 Exonuclease VII, large subunit IUJ44_12135 PF13742 OB-fold nucleic acid binding domain IUJ44_12165 PF01810 LysE type translocator IUJ44_12170 PF00313 'Cold-shock' DNA-binding domain IUJ44_12180 PF03807 NADP oxidoreductase coenzyme F420-dependent IUJ44_12180 PF14748 Pyrroline-5-carboxylate reductase dimerisation IUJ44_12205 PF07690 Major Facilitator Superfamily IUJ44_12210 PF01638 HxlR-like helix-turn-helix IUJ44_12280 PF02954 Bacterial regulatory protein, Fis family IUJ44_12285 PF00580 UvrD/REP helicase N-terminal domain IUJ44_12285 PF13361 UvrD-like helicase C-terminal domain IUJ44_12295 PF09588 YqaJ-like viral recombinase domain IUJ44_12485 PF00589 Phage integrase family IUJ44_12495 PF09190 DALR domain IUJ44_12495 PF01406 tRNA synthetases class I (C) catalytic domain IUJ44_12500 PF01380 SIS domain IUJ44_12500 PF00571 CBS domain IUJ44_12515 PF03968 OstA-like protein IUJ44_12520 PF12399 Branched-chain amino acid ATP-binding cassette transporter IUJ44_12520 PF00005 ABC transporter IUJ44_12570 PF03412 Peptidase C39 family IUJ44_12570 PF00005 ABC transporter IUJ44_12570 PF00664 ABC transporter transmembrane region IUJ44_12580 PF01205 Uncharacterized protein family UPF0029 IUJ44_12585 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_12595 PF01596 O-methyltransferase IUJ44_12605 PF11953 Domain of unknown function (DUF3470) IUJ44_12605 PF00037 4Fe-4S binding domain IUJ44_12615 PF00488 MutS domain V IUJ44_12615 PF05192 MutS domain III IUJ44_12615 PF01624 MutS domain I IUJ44_12615 PF05188 MutS domain II IUJ44_12615 PF05190 MutS family domain IV IUJ44_12620 PF01037 Lrp/AsnC ligand binding domain IUJ44_12625 PF00892 EamA-like transporter family IUJ44_12630 PF03707 Bacterial signalling protein N terminal repeat IUJ44_12630 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_12630 PF00563 EAL domain IUJ44_12635 PF03279 Bacterial lipid A biosynthesis acyltransferase IUJ44_12645 PF07690 Major Facilitator Superfamily IUJ44_12665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUJ44_12665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUJ44_12685 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_12700 PF03466 LysR substrate binding domain IUJ44_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_12705 PF01566 Natural resistance-associated macrophage protein IUJ44_12710 PF03746 LamB/YcsF family IUJ44_12715 PF07286 Protein of unknown function (DUF1445) IUJ44_12725 PF00364 Biotin-requiring enzyme IUJ44_12725 PF00289 Biotin carboxylase, N-terminal domain IUJ44_12725 PF02785 Biotin carboxylase C-terminal domain IUJ44_12725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUJ44_12730 PF00654 Voltage gated chloride channel IUJ44_12735 PF08479 POTRA domain, ShlB-type IUJ44_12735 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IUJ44_12735 PF17287 POTRA domain IUJ44_12740 PF13018 Extended Signal Peptide of Type V secretion system IUJ44_12740 PF13332 Hemagglutinin repeat IUJ44_12740 PF05860 haemagglutination activity domain IUJ44_12740 PF04829 Pre-toxin domain with VENN motif IUJ44_12755 PF00440 Bacterial regulatory proteins, tetR family IUJ44_12765 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_12765 PF13823 Alcohol dehydrogenase GroES-associated IUJ44_12765 PF00107 Zinc-binding dehydrogenase IUJ44_12780 PF02785 Biotin carboxylase C-terminal domain IUJ44_12780 PF00289 Biotin carboxylase, N-terminal domain IUJ44_12780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUJ44_12785 PF02525 Flavodoxin-like fold IUJ44_12790 PF01638 HxlR-like helix-turn-helix IUJ44_12805 PF08753 NikR C terminal nickel binding domain IUJ44_12805 PF01402 Ribbon-helix-helix protein, copG family IUJ44_12810 PF01425 Amidase IUJ44_12815 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUJ44_12820 PF00005 ABC transporter IUJ44_12845 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IUJ44_12860 PF05947 Type VI secretion system, TssF IUJ44_12875 PF06761 Intracellular multiplication and human macrophage-killing IUJ44_12875 PF14331 ImcF-related N-terminal domain IUJ44_12875 PF06744 Type VI secretion protein IcmF C-terminal IUJ44_12885 PF01389 OmpA-like transmembrane domain IUJ44_12885 PF00691 OmpA family IUJ44_12895 PF17871 AAA lid domain IUJ44_12895 PF07724 AAA domain (Cdc48 subfamily) IUJ44_12895 PF10431 C-terminal, D2-small domain, of ClpB protein IUJ44_12895 PF00004 ATPase family associated with various cellular activities (AAA) IUJ44_12900 PF06812 ImpA, N-terminal, type VI secretion system IUJ44_12905 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IUJ44_12925 PF03466 LysR substrate binding domain IUJ44_12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_12935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IUJ44_12940 PF07690 Major Facilitator Superfamily IUJ44_12955 PF02677 Epoxyqueuosine reductase QueH IUJ44_12975 PF00701 Dihydrodipicolinate synthetase family IUJ44_12985 PF00392 Bacterial regulatory proteins, gntR family IUJ44_12990 PF05544 Proline racemase IUJ44_12995 PF01266 FAD dependent oxidoreductase IUJ44_12995 PF01266 FAD dependent oxidoreductase IUJ44_13005 PF04324 BFD-like [2Fe-2S] binding domain IUJ44_13005 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_13015 PF00083 Sugar (and other) transporter IUJ44_13020 PF00171 Aldehyde dehydrogenase family IUJ44_13025 PF13520 Amino acid permease IUJ44_13030 PF03313 Serine dehydratase alpha chain IUJ44_13030 PF03315 Serine dehydratase beta chain IUJ44_13035 PF00171 Aldehyde dehydrogenase family IUJ44_13035 PF01575 MaoC like domain IUJ44_13040 PF05138 Phenylacetic acid catabolic protein IUJ44_13045 PF06243 Phenylacetic acid degradation B IUJ44_13050 PF05138 Phenylacetic acid catabolic protein IUJ44_13055 PF01883 Iron-sulfur cluster assembly protein IUJ44_13060 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_13060 PF00970 Oxidoreductase FAD-binding domain IUJ44_13060 PF00175 Oxidoreductase NAD-binding domain IUJ44_13065 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_13070 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_13075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUJ44_13075 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IUJ44_13075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUJ44_13080 PF02803 Thiolase, C-terminal domain IUJ44_13080 PF00108 Thiolase, N-terminal domain IUJ44_13085 PF00501 AMP-binding enzyme IUJ44_13085 PF14535 AMP-binding enzyme C-terminal domain IUJ44_13090 PF07848 PaaX-like protein IUJ44_13090 PF08223 PaaX-like protein C-terminal domain IUJ44_13095 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_13100 PF03061 Thioesterase superfamily IUJ44_13140 PF06719 AraC-type transcriptional regulator N-terminus IUJ44_13140 PF12833 Helix-turn-helix domain IUJ44_13155 PF02515 CoA-transferase family III IUJ44_13160 PF00682 HMGL-like IUJ44_13165 PF07690 Major Facilitator Superfamily IUJ44_13170 PF00199 Catalase IUJ44_13175 PF01292 Prokaryotic cytochrome b561 IUJ44_13195 PF12697 Alpha/beta hydrolase family IUJ44_13200 PF01613 Flavin reductase like domain IUJ44_13205 PF00296 Luciferase-like monooxygenase IUJ44_13210 PF00171 Aldehyde dehydrogenase family IUJ44_13220 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IUJ44_13230 PF00171 Aldehyde dehydrogenase family IUJ44_13235 PF02627 Carboxymuconolactone decarboxylase family IUJ44_13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13240 PF03466 LysR substrate binding domain IUJ44_13245 PF02525 Flavodoxin-like fold IUJ44_13250 PF01614 Bacterial transcriptional regulator IUJ44_13250 PF09339 IclR helix-turn-helix domain IUJ44_13255 PF01494 FAD binding domain IUJ44_13260 PF00392 Bacterial regulatory proteins, gntR family IUJ44_13260 PF07702 UTRA domain IUJ44_13270 PF08402 TOBE domain IUJ44_13270 PF00005 ABC transporter IUJ44_13275 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_13280 PF01266 FAD dependent oxidoreductase IUJ44_13285 PF00266 Aminotransferase class-V IUJ44_13290 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_13295 PF07690 Major Facilitator Superfamily IUJ44_13300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_13300 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_13300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_13305 PF02515 CoA-transferase family III IUJ44_13310 PF09339 IclR helix-turn-helix domain IUJ44_13315 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_13320 PF03060 Nitronate monooxygenase IUJ44_13325 PF07690 Major Facilitator Superfamily IUJ44_13330 PF09339 IclR helix-turn-helix domain IUJ44_13335 PF02803 Thiolase, C-terminal domain IUJ44_13335 PF00108 Thiolase, N-terminal domain IUJ44_13340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUJ44_13340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUJ44_13340 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IUJ44_13350 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_13355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_13355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_13355 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_13360 PF07690 Major Facilitator Superfamily IUJ44_13365 PF01144 Coenzyme A transferase IUJ44_13370 PF01144 Coenzyme A transferase IUJ44_13380 PF07690 Major Facilitator Superfamily IUJ44_13390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_13390 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_13390 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUJ44_13390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_13405 PF03466 LysR substrate binding domain IUJ44_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13410 PF00682 HMGL-like IUJ44_13415 PF18140 Propionyl-coenzyme A carboxylase BT domain IUJ44_13415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUJ44_13415 PF00289 Biotin carboxylase, N-terminal domain IUJ44_13415 PF02785 Biotin carboxylase C-terminal domain IUJ44_13415 PF00364 Biotin-requiring enzyme IUJ44_13420 PF00378 Enoyl-CoA hydratase/isomerase IUJ44_13425 PF01039 Carboxyl transferase domain IUJ44_13430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_13430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_13430 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_13435 PF00440 Bacterial regulatory proteins, tetR family IUJ44_13440 PF00501 AMP-binding enzyme IUJ44_13440 PF13193 AMP-binding enzyme C-terminal domain IUJ44_13460 PF03466 LysR substrate binding domain IUJ44_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13495 PF00994 Probable molybdopterin binding domain IUJ44_13495 PF18146 Damage-inducible protein CinA KH domain IUJ44_13495 PF02464 Competence-damaged protein IUJ44_13505 PF18011 C-terminal domain found in long catalases IUJ44_13505 PF06628 Catalase-related immune-responsive IUJ44_13505 PF00199 Catalase IUJ44_13530 PF00717 Peptidase S24-like IUJ44_13540 PF13404 AsnC-type helix-turn-helix domain IUJ44_13540 PF01037 Lrp/AsnC ligand binding domain IUJ44_13550 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_13550 PF00072 Response regulator receiver domain IUJ44_13550 PF09308 LuxQ, periplasmic IUJ44_13550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_13555 PF00072 Response regulator receiver domain IUJ44_13570 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_13575 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_13580 PF00005 ABC transporter IUJ44_13585 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUJ44_13590 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUJ44_13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13600 PF03466 LysR substrate binding domain IUJ44_13605 PF01810 LysE type translocator IUJ44_13610 PF00266 Aminotransferase class-V IUJ44_13620 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_13625 PF00581 Rhodanese-like domain IUJ44_13635 PF03466 LysR substrate binding domain IUJ44_13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13640 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_13645 PF14834 Glutathione S-transferase, C-terminal domain IUJ44_13645 PF02798 Glutathione S-transferase, N-terminal domain IUJ44_13650 PF03466 LysR substrate binding domain IUJ44_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13655 PF03788 LrgA family IUJ44_13660 PF04172 LrgB-like family IUJ44_13665 PF00155 Aminotransferase class I and II IUJ44_13665 PF00392 Bacterial regulatory proteins, gntR family IUJ44_13680 PF07690 Major Facilitator Superfamily IUJ44_13690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13690 PF03466 LysR substrate binding domain IUJ44_13695 PF16957 Malonate decarboxylase, alpha subunit, transporter IUJ44_13700 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IUJ44_13705 PF06857 Malonate decarboxylase delta subunit (MdcD) IUJ44_13710 PF01039 Carboxyl transferase domain IUJ44_13720 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG IUJ44_13725 PF00698 Acyl transferase domain IUJ44_13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13740 PF03466 LysR substrate binding domain IUJ44_13745 PF00392 Bacterial regulatory proteins, gntR family IUJ44_13745 PF00155 Aminotransferase class I and II IUJ44_13755 PF02322 Cytochrome bd terminal oxidase subunit II IUJ44_13760 PF01654 Cytochrome bd terminal oxidase subunit I IUJ44_13775 PF00296 Luciferase-like monooxygenase IUJ44_13780 PF00083 Sugar (and other) transporter IUJ44_13790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IUJ44_13795 PF00005 ABC transporter IUJ44_13800 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_13805 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IUJ44_13810 PF01177 Asp/Glu/Hydantoin racemase IUJ44_13815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IUJ44_13825 PF03466 LysR substrate binding domain IUJ44_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13835 PF01979 Amidohydrolase family IUJ44_13835 PF13382 Adenine deaminase C-terminal domain IUJ44_13845 PF03960 ArsC family IUJ44_13850 PF01022 Bacterial regulatory protein, arsR family IUJ44_13855 PF01758 Sodium Bile acid symporter family IUJ44_13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_13860 PF03466 LysR substrate binding domain IUJ44_13875 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_13875 PF13192 Thioredoxin domain IUJ44_13890 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_13895 PF00588 SpoU rRNA Methylase family IUJ44_13900 PF14579 Helix-hairpin-helix motif IUJ44_13900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IUJ44_13900 PF01336 OB-fold nucleic acid binding domain IUJ44_13900 PF02811 PHP domain IUJ44_13900 PF07733 Bacterial DNA polymerase III alpha NTPase domain IUJ44_13905 PF17763 Glutaminase/Asparaginase C-terminal domain IUJ44_13905 PF00710 Asparaginase, N-terminal IUJ44_13910 PF00375 Sodium:dicarboxylate symporter family IUJ44_13915 PF00155 Aminotransferase class I and II IUJ44_13920 PF01641 SelR domain IUJ44_13925 PF00255 Glutathione peroxidase IUJ44_13930 PF12852 Cupin IUJ44_13930 PF12833 Helix-turn-helix domain IUJ44_13940 PF00155 Aminotransferase class I and II IUJ44_13945 PF08335 GlnD PII-uridylyltransferase IUJ44_13945 PF01966 HD domain IUJ44_13945 PF01909 Nucleotidyltransferase domain IUJ44_13950 PF02222 ATP-grasp domain IUJ44_13960 PF05437 Branched-chain amino acid transport protein (AzlD) IUJ44_13965 PF03591 AzlC protein IUJ44_13990 PF01926 50S ribosome-binding GTPase IUJ44_13990 PF06071 Protein of unknown function (DUF933) IUJ44_13995 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_14000 PF00005 ABC transporter IUJ44_14000 PF09383 NIL domain IUJ44_14005 PF03180 NLPA lipoprotein IUJ44_14010 PF03180 NLPA lipoprotein IUJ44_14015 PF00296 Luciferase-like monooxygenase IUJ44_14025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_14025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_14040 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_14045 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_14050 PF00005 ABC transporter IUJ44_14060 PF01037 Lrp/AsnC ligand binding domain IUJ44_14065 PF01709 Transcriptional regulator IUJ44_14075 PF00440 Bacterial regulatory proteins, tetR family IUJ44_14085 PF01695 IstB-like ATP binding protein IUJ44_14090 PF00665 Integrase core domain IUJ44_14120 PF10544 T5orf172 domain IUJ44_14150 PF03466 LysR substrate binding domain IUJ44_14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_14160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IUJ44_14170 PF00892 EamA-like transporter family IUJ44_14190 PF00577 Outer membrane usher protein IUJ44_14190 PF13954 PapC N-terminal domain IUJ44_14190 PF13953 PapC C-terminal domain IUJ44_14195 PF02753 Pili assembly chaperone PapD, C-terminal domain IUJ44_14195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IUJ44_14200 PF16970 Type-1 fimbrial protein, A IUJ44_14215 PF06968 Biotin and Thiamin Synthesis associated domain IUJ44_14215 PF04055 Radical SAM superfamily IUJ44_14220 PF08331 Domain of unknown function (DUF1730) IUJ44_14225 PF01256 Carbohydrate kinase IUJ44_14225 PF03853 YjeF-related protein N-terminus IUJ44_14230 PF02075 Crossover junction endodeoxyribonuclease RuvC IUJ44_14245 PF00905 Penicillin binding protein transpeptidase domain IUJ44_14265 PF02773 S-adenosylmethionine synthetase, C-terminal domain IUJ44_14265 PF02772 S-adenosylmethionine synthetase, central domain IUJ44_14265 PF00438 S-adenosylmethionine synthetase, N-terminal domain IUJ44_14270 PF02779 Transketolase, pyrimidine binding domain IUJ44_14270 PF00456 Transketolase, thiamine diphosphate binding domain IUJ44_14270 PF02780 Transketolase, C-terminal domain IUJ44_14280 PF04264 YceI-like domain IUJ44_14290 PF09992 Phosphodiester glycosidase IUJ44_14300 PF05958 tRNA (Uracil-5-)-methyltransferase IUJ44_14305 PF04229 GrpB protein IUJ44_14310 PF14850 DNA-binding domain of Proline dehydrogenase IUJ44_14310 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IUJ44_14310 PF01619 Proline dehydrogenase IUJ44_14310 PF00171 Aldehyde dehydrogenase family IUJ44_14315 PF01037 Lrp/AsnC ligand binding domain IUJ44_14320 PF00474 Sodium:solute symporter family IUJ44_14325 PF02146 Sir2 family IUJ44_14330 PF01597 Glycine cleavage H-protein IUJ44_14335 PF12833 Helix-turn-helix domain IUJ44_14335 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IUJ44_14345 PF00005 ABC transporter IUJ44_14345 PF00664 ABC transporter transmembrane region IUJ44_14350 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IUJ44_14355 PF06912 Protein of unknown function (DUF1275) IUJ44_14360 PF00375 Sodium:dicarboxylate symporter family IUJ44_14375 PF08007 Cupin superfamily protein IUJ44_14380 PF02545 Maf-like protein IUJ44_14390 PF00162 Phosphoglycerate kinase IUJ44_14400 PF01116 Fructose-bisphosphate aldolase class-II IUJ44_14405 PF09312 SurA N-terminal domain IUJ44_14405 PF00639 PPIC-type PPIASE domain IUJ44_14410 PF04453 LPS transport system D IUJ44_14410 PF03968 OstA-like protein IUJ44_14415 PF01636 Phosphotransferase enzyme family IUJ44_14420 PF00483 Nucleotidyl transferase IUJ44_14425 PF02527 rRNA small subunit methyltransferase G IUJ44_14430 PF13614 AAA domain IUJ44_14435 PF02195 ParB-like nuclease domain IUJ44_14435 PF17762 HTH domain found in ParB protein IUJ44_14440 PF01618 MotA/TolQ/ExbB proton channel family IUJ44_14450 PF00664 ABC transporter transmembrane region IUJ44_14450 PF00005 ABC transporter IUJ44_14455 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IUJ44_14460 PF02348 Cytidylyltransferase IUJ44_14465 PF09115 DNA polymerase III, delta subunit, C terminal IUJ44_14475 PF01026 TatD related DNase IUJ44_14490 PF07963 Prokaryotic N-terminal methylation motif IUJ44_14490 PF02501 Type II secretion system (T2SS), protein I IUJ44_14495 PF07963 Prokaryotic N-terminal methylation motif IUJ44_14495 PF11612 Type II secretion system (T2SS), protein J IUJ44_14500 PF03934 Type II secretion system (T2SS), protein K IUJ44_14510 PF03167 Uracil DNA glycosylase superfamily IUJ44_14520 PF14437 MafB19-like deaminase IUJ44_14530 PF02224 Cytidylate kinase IUJ44_14535 PF00575 S1 RNA binding domain IUJ44_14540 PF00216 Bacterial DNA-binding protein IUJ44_14550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IUJ44_14560 PF00743 Flavin-binding monooxygenase-like IUJ44_14570 PF03969 AFG1-like ATPase IUJ44_14575 PF01274 Malate synthase IUJ44_14585 PF02472 Biopolymer transport protein ExbD/TolR IUJ44_14590 PF02472 Biopolymer transport protein ExbD/TolR IUJ44_14595 PF01618 MotA/TolQ/ExbB proton channel family IUJ44_14605 PF07715 TonB-dependent Receptor Plug Domain IUJ44_14605 PF00593 TonB dependent receptor IUJ44_14625 PF01432 Peptidase family M3 IUJ44_14630 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_14635 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_14640 PF00005 ABC transporter IUJ44_14640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IUJ44_14655 PF00459 Inositol monophosphatase family IUJ44_14665 PF01649 Ribosomal protein S20 IUJ44_14670 PF13460 NAD(P)H-binding IUJ44_14675 PF03737 Aldolase/RraA IUJ44_14695 PF02559 CarD-like/TRCF domain IUJ44_14695 PF00270 DEAD/DEAH box helicase IUJ44_14695 PF00271 Helicase conserved C-terminal domain IUJ44_14695 PF03461 TRCF domain IUJ44_14695 PF17757 UvrB interaction domain IUJ44_14705 PF00211 Adenylate and Guanylate cyclase catalytic domain IUJ44_14710 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_14715 PF00012 Hsp70 protein IUJ44_14720 PF07743 HSCB C-terminal oligomerisation domain IUJ44_14720 PF00226 DnaJ domain IUJ44_14725 PF01521 Iron-sulphur cluster biosynthesis IUJ44_14730 PF01592 NifU-like N terminal domain IUJ44_14735 PF00266 Aminotransferase class-V IUJ44_14740 PF02082 Transcriptional regulator IUJ44_14755 PF00216 Bacterial DNA-binding protein IUJ44_14760 PF00639 PPIC-type PPIASE domain IUJ44_14760 PF09312 SurA N-terminal domain IUJ44_14765 PF12852 Cupin IUJ44_14765 PF12833 Helix-turn-helix domain IUJ44_14770 PF00487 Fatty acid desaturase IUJ44_14775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_14775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_14775 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_14780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_14780 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_14780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_14785 PF03109 ABC1 family IUJ44_14795 PF04073 Aminoacyl-tRNA editing domain IUJ44_14800 PF06276 Ferric iron reductase FhuF-like transporter IUJ44_14800 PF04183 IucA / IucC family IUJ44_14805 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IUJ44_14810 PF07690 Major Facilitator Superfamily IUJ44_14815 PF06276 Ferric iron reductase FhuF-like transporter IUJ44_14815 PF04183 IucA / IucC family IUJ44_14820 PF04183 IucA / IucC family IUJ44_14820 PF06276 Ferric iron reductase FhuF-like transporter IUJ44_14830 PF03737 Aldolase/RraA IUJ44_14835 PF07715 TonB-dependent Receptor Plug Domain IUJ44_14835 PF00593 TonB dependent receptor IUJ44_14860 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_14870 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IUJ44_14875 PF02277 Phosphoribosyltransferase IUJ44_14880 PF00300 Histidine phosphatase superfamily (branch 1) IUJ44_14890 PF02654 Cobalamin-5-phosphate synthase IUJ44_14895 PF00793 DAHP synthetase I family IUJ44_14900 PF01925 Sulfite exporter TauE/SafE IUJ44_14920 PF07715 TonB-dependent Receptor Plug Domain IUJ44_14920 PF00593 TonB dependent receptor IUJ44_14925 PF02684 Lipid-A-disaccharide synthetase IUJ44_14935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_14940 PF00005 ABC transporter IUJ44_14975 PF01230 HIT domain IUJ44_15005 PF08241 Methyltransferase domain IUJ44_15010 PF00561 alpha/beta hydrolase fold IUJ44_15015 PF01053 Cys/Met metabolism PLP-dependent enzyme IUJ44_15025 PF02575 YbaB/EbfC DNA-binding family IUJ44_15030 PF13662 Toprim domain IUJ44_15030 PF02132 RecR protein IUJ44_15040 PF05175 Methyltransferase small domain IUJ44_15045 PF01264 Chorismate synthase IUJ44_15050 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_15050 PF08448 PAS fold IUJ44_15065 PF04055 Radical SAM superfamily IUJ44_15070 PF00676 Dehydrogenase E1 component IUJ44_15075 PF02780 Transketolase, C-terminal domain IUJ44_15075 PF02779 Transketolase, pyrimidine binding domain IUJ44_15080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUJ44_15080 PF00364 Biotin-requiring enzyme IUJ44_15080 PF02817 e3 binding domain IUJ44_15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_15085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUJ44_15090 PF00106 short chain dehydrogenase IUJ44_15095 PF00107 Zinc-binding dehydrogenase IUJ44_15095 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_15100 PF01062 Bestrophin, RFP-TM, chloride channel IUJ44_15105 PF02954 Bacterial regulatory protein, Fis family IUJ44_15105 PF00072 Response regulator receiver domain IUJ44_15105 PF00158 Sigma-54 interaction domain IUJ44_15110 PF04273 Putative phosphatase (DUF442) IUJ44_15110 PF00753 Metallo-beta-lactamase superfamily IUJ44_15115 PF04273 Putative phosphatase (DUF442) IUJ44_15115 PF00753 Metallo-beta-lactamase superfamily IUJ44_15120 PF01925 Sulfite exporter TauE/SafE IUJ44_15135 PF06445 GyrI-like small molecule binding domain IUJ44_15135 PF12833 Helix-turn-helix domain IUJ44_15140 PF01638 HxlR-like helix-turn-helix IUJ44_15145 PF02525 Flavodoxin-like fold IUJ44_15155 PF07702 UTRA domain IUJ44_15155 PF00392 Bacterial regulatory proteins, gntR family IUJ44_15170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IUJ44_15175 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_15180 PF00005 ABC transporter IUJ44_15195 PF00083 Sugar (and other) transporter IUJ44_15200 PF00593 TonB dependent receptor IUJ44_15200 PF07715 TonB-dependent Receptor Plug Domain IUJ44_15205 PF10415 Fumarase C C-terminus IUJ44_15205 PF00206 Lyase IUJ44_15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15220 PF03466 LysR substrate binding domain IUJ44_15225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15225 PF03466 LysR substrate binding domain IUJ44_15230 PF02803 Thiolase, C-terminal domain IUJ44_15230 PF00108 Thiolase, N-terminal domain IUJ44_15235 PF02667 Short chain fatty acid transporter IUJ44_15240 PF01144 Coenzyme A transferase IUJ44_15245 PF01144 Coenzyme A transferase IUJ44_15250 PF03466 LysR substrate binding domain IUJ44_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15270 PF00440 Bacterial regulatory proteins, tetR family IUJ44_15290 PF06719 AraC-type transcriptional regulator N-terminus IUJ44_15290 PF12833 Helix-turn-helix domain IUJ44_15295 PF07690 Major Facilitator Superfamily IUJ44_15300 PF01738 Dienelactone hydrolase family IUJ44_15315 PF01613 Flavin reductase like domain IUJ44_15325 PF12833 Helix-turn-helix domain IUJ44_15325 PF14525 AraC-binding-like domain IUJ44_15330 PF00970 Oxidoreductase FAD-binding domain IUJ44_15330 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_15330 PF00175 Oxidoreductase NAD-binding domain IUJ44_15335 PF00866 Ring hydroxylating beta subunit IUJ44_15340 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IUJ44_15340 PF00355 Rieske [2Fe-2S] domain IUJ44_15345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15345 PF03459 TOBE domain IUJ44_15355 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_15360 PF00005 ABC transporter IUJ44_15360 PF03459 TOBE domain IUJ44_15365 PF00106 short chain dehydrogenase IUJ44_15370 PF00550 Phosphopantetheine attachment site IUJ44_15370 PF00857 Isochorismatase family IUJ44_15380 PF00149 Calcineurin-like phosphoesterase IUJ44_15385 PF13090 Polyphosphate kinase C-terminal domain 2 IUJ44_15385 PF17941 Polyphosphate kinase C-terminal domain 1 IUJ44_15385 PF13089 Polyphosphate kinase N-terminal domain IUJ44_15385 PF02503 Polyphosphate kinase middle domain IUJ44_15390 PF08042 PqqA family IUJ44_15395 PF12706 Beta-lactamase superfamily domain IUJ44_15400 PF03070 TENA/THI-4/PQQC family IUJ44_15405 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IUJ44_15410 PF04055 Radical SAM superfamily IUJ44_15410 PF13186 Iron-sulfur cluster-binding domain IUJ44_15415 PF01244 Membrane dipeptidase (Peptidase family M19) IUJ44_15430 PF13091 PLD-like domain IUJ44_15445 PF00199 Catalase IUJ44_15455 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_15455 PF00107 Zinc-binding dehydrogenase IUJ44_15470 PF00577 Outer membrane usher protein IUJ44_15470 PF13954 PapC N-terminal domain IUJ44_15470 PF13953 PapC C-terminal domain IUJ44_15475 PF02753 Pili assembly chaperone PapD, C-terminal domain IUJ44_15475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IUJ44_15490 PF00005 ABC transporter IUJ44_15490 PF17755 UvrA DNA-binding domain IUJ44_15490 PF17760 UvrA interaction domain IUJ44_15495 PF00873 AcrB/AcrD/AcrF family IUJ44_15500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_15500 PF00529 HlyD membrane-fusion protein of T1SS IUJ44_15505 PF00486 Transcriptional regulatory protein, C terminal IUJ44_15505 PF00072 Response regulator receiver domain IUJ44_15510 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_15510 PF16527 Two-component sensor protein CpxA, periplasmic domain IUJ44_15510 PF00672 HAMP domain IUJ44_15520 PF12833 Helix-turn-helix domain IUJ44_15520 PF02311 AraC-like ligand binding domain IUJ44_15525 PF12146 Serine aminopeptidase, S33 IUJ44_15550 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family IUJ44_15565 PF13673 Acetyltransferase (GNAT) domain IUJ44_15590 PF02824 TGS domain IUJ44_15590 PF13291 ACT domain IUJ44_15590 PF04607 Region found in RelA / SpoT proteins IUJ44_15600 PF01975 Survival protein SurE IUJ44_15625 PF07690 Major Facilitator Superfamily IUJ44_15630 PF13533 Biotin-lipoyl like IUJ44_15660 PF03852 DNA mismatch endonuclease Vsr IUJ44_15665 PF01381 Helix-turn-helix IUJ44_15665 PF00145 C-5 cytosine-specific DNA methylase IUJ44_15670 PF07728 AAA domain (dynein-related subfamily) IUJ44_15710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IUJ44_15715 PF14572 Phosphoribosyl synthetase-associated domain IUJ44_15715 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IUJ44_15735 PF00005 ABC transporter IUJ44_15740 PF01032 FecCD transport family IUJ44_15750 PF00107 Zinc-binding dehydrogenase IUJ44_15750 PF08240 Alcohol dehydrogenase GroES-like domain IUJ44_15765 PF06719 AraC-type transcriptional regulator N-terminus IUJ44_15765 PF12833 Helix-turn-helix domain IUJ44_15770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUJ44_15770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IUJ44_15775 PF07690 Major Facilitator Superfamily IUJ44_15780 PF01370 NAD dependent epimerase/dehydratase family IUJ44_15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15785 PF03466 LysR substrate binding domain IUJ44_15795 PF00920 Dehydratase family IUJ44_15800 PF00171 Aldehyde dehydrogenase family IUJ44_15815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUJ44_15815 PF00529 HlyD membrane-fusion protein of T1SS IUJ44_15830 PF03466 LysR substrate binding domain IUJ44_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15840 PF08450 SMP-30/Gluconolactonase/LRE-like region IUJ44_15845 PF07702 UTRA domain IUJ44_15845 PF00392 Bacterial regulatory proteins, gntR family IUJ44_15855 PF04909 Amidohydrolase IUJ44_15860 PF07690 Major Facilitator Superfamily IUJ44_15880 PF05860 haemagglutination activity domain IUJ44_15880 PF13332 Hemagglutinin repeat IUJ44_15880 PF13018 Extended Signal Peptide of Type V secretion system IUJ44_15880 PF04829 Pre-toxin domain with VENN motif IUJ44_15885 PF17287 POTRA domain IUJ44_15885 PF08479 POTRA domain, ShlB-type IUJ44_15885 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IUJ44_15905 PF13193 AMP-binding enzyme C-terminal domain IUJ44_15905 PF00501 AMP-binding enzyme IUJ44_15915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_15915 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_15915 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUJ44_15915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_15920 PF01575 MaoC like domain IUJ44_15925 PF00106 short chain dehydrogenase IUJ44_15940 PF03466 LysR substrate binding domain IUJ44_15940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_15945 PF00440 Bacterial regulatory proteins, tetR family IUJ44_15945 PF08359 YsiA-like protein, C-terminal region IUJ44_15950 PF12706 Beta-lactamase superfamily domain IUJ44_15960 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_15970 PF13411 MerR HTH family regulatory protein IUJ44_15985 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_15985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUJ44_15990 PF00561 alpha/beta hydrolase fold IUJ44_16000 PF00171 Aldehyde dehydrogenase family IUJ44_16010 PF07690 Major Facilitator Superfamily IUJ44_16015 PF00920 Dehydratase family IUJ44_16020 PF07729 FCD domain IUJ44_16020 PF00392 Bacterial regulatory proteins, gntR family IUJ44_16030 PF03466 LysR substrate binding domain IUJ44_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_16035 PF13378 Enolase C-terminal domain-like IUJ44_16035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IUJ44_16040 PF02426 Muconolactone delta-isomerase IUJ44_16045 PF00775 Dioxygenase IUJ44_16045 PF04444 Catechol dioxygenase N terminus IUJ44_16050 PF01144 Coenzyme A transferase IUJ44_16055 PF01144 Coenzyme A transferase IUJ44_16060 PF00108 Thiolase, N-terminal domain IUJ44_16060 PF02803 Thiolase, C-terminal domain IUJ44_16065 PF12146 Serine aminopeptidase, S33 IUJ44_16075 PF00171 Aldehyde dehydrogenase family IUJ44_16085 PF02727 Copper amine oxidase, N2 domain IUJ44_16085 PF07833 Copper amine oxidase N-terminal domain IUJ44_16085 PF02728 Copper amine oxidase, N3 domain IUJ44_16085 PF01179 Copper amine oxidase, enzyme domain IUJ44_16090 PF12833 Helix-turn-helix domain IUJ44_16090 PF02311 AraC-like ligand binding domain IUJ44_16095 PF01613 Flavin reductase like domain IUJ44_16100 PF00175 Oxidoreductase NAD-binding domain IUJ44_16100 PF00111 2Fe-2S iron-sulfur cluster binding domain IUJ44_16115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IUJ44_16115 PF00355 Rieske [2Fe-2S] domain IUJ44_16130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_16135 PF01425 Amidase IUJ44_16145 PF07690 Major Facilitator Superfamily IUJ44_16155 PF00106 short chain dehydrogenase IUJ44_16170 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_16170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_16170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_16175 PF03466 LysR substrate binding domain IUJ44_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_16180 PF09339 IclR helix-turn-helix domain IUJ44_16180 PF01614 Bacterial transcriptional regulator IUJ44_16185 PF00753 Metallo-beta-lactamase superfamily IUJ44_16195 PF04143 Sulphur transport IUJ44_16205 PF01011 PQQ enzyme repeat IUJ44_16205 PF13360 PQQ-like domain IUJ44_16210 PF04966 Carbohydrate-selective porin, OprB family IUJ44_16215 PF05048 Periplasmic copper-binding protein (NosD) IUJ44_16220 PF01487 Type I 3-dehydroquinase IUJ44_16225 PF00775 Dioxygenase IUJ44_16230 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IUJ44_16230 PF00775 Dioxygenase IUJ44_16235 PF02627 Carboxymuconolactone decarboxylase family IUJ44_16240 PF07690 Major Facilitator Superfamily IUJ44_16245 PF00561 alpha/beta hydrolase fold IUJ44_16250 PF10397 Adenylosuccinate lyase C-terminus IUJ44_16250 PF00206 Lyase IUJ44_16255 PF00108 Thiolase, N-terminal domain IUJ44_16255 PF02803 Thiolase, C-terminal domain IUJ44_16260 PF01144 Coenzyme A transferase IUJ44_16265 PF01144 Coenzyme A transferase IUJ44_16270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IUJ44_16275 PF04977 Septum formation initiator IUJ44_16280 PF04239 Protein of unknown function (DUF421) IUJ44_16285 PF00113 Enolase, C-terminal TIM barrel domain IUJ44_16285 PF03952 Enolase, N-terminal domain IUJ44_16290 PF00793 DAHP synthetase I family IUJ44_16295 PF00117 Glutamine amidotransferase class-I IUJ44_16295 PF06418 CTP synthase N-terminus IUJ44_16325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUJ44_16325 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_16340 PF00793 DAHP synthetase I family IUJ44_16345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IUJ44_16350 PF07724 AAA domain (Cdc48 subfamily) IUJ44_16350 PF17871 AAA lid domain IUJ44_16350 PF02861 Clp amino terminal domain, pathogenicity island component IUJ44_16350 PF10431 C-terminal, D2-small domain, of ClpB protein IUJ44_16350 PF00004 ATPase family associated with various cellular activities (AAA) IUJ44_16355 PF02617 ATP-dependent Clp protease adaptor protein ClpS IUJ44_16365 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUJ44_16365 PF02774 Semialdehyde dehydrogenase, dimerisation domain IUJ44_16380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IUJ44_16385 PF00291 Pyridoxal-phosphate dependent enzyme IUJ44_16385 PF00585 C-terminal regulatory domain of Threonine dehydratase IUJ44_16390 PF02254 TrkA-N domain IUJ44_16390 PF02080 TrkA-C domain IUJ44_16395 PF02386 Cation transport protein IUJ44_16400 PF02253 Phospholipase A1 IUJ44_16405 PF08367 Peptidase M16C associated IUJ44_16405 PF00675 Insulinase (Peptidase family M16) IUJ44_16405 PF05193 Peptidase M16 inactive domain IUJ44_16410 PF07715 TonB-dependent Receptor Plug Domain IUJ44_16410 PF00593 TonB dependent receptor IUJ44_16415 PF00294 pfkB family carbohydrate kinase IUJ44_16425 PF07290 Protein of unknown function (DUF1449) IUJ44_16435 PF01654 Cytochrome bd terminal oxidase subunit I IUJ44_16440 PF02322 Cytochrome bd terminal oxidase subunit II IUJ44_16445 PF08173 Membrane bound YbgT-like protein IUJ44_16455 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IUJ44_16465 PF00448 SRP54-type protein, GTPase domain IUJ44_16465 PF02881 SRP54-type protein, helical bundle domain IUJ44_16490 PF00571 CBS domain IUJ44_16490 PF00478 IMP dehydrogenase / GMP reductase domain IUJ44_16495 PF00202 Aminotransferase class-III IUJ44_16500 PF00462 Glutaredoxin IUJ44_16510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_16510 PF03466 LysR substrate binding domain IUJ44_16515 PF00557 Metallopeptidase family M24 IUJ44_16520 PF05525 Branched-chain amino acid transport protein IUJ44_16545 PF05524 PEP-utilising enzyme, N-terminal IUJ44_16545 PF00391 PEP-utilising enzyme, mobile domain IUJ44_16545 PF02896 PEP-utilising enzyme, TIM barrel domain IUJ44_16545 PF00381 PTS HPr component phosphorylation site IUJ44_16545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IUJ44_16550 PF00294 pfkB family carbohydrate kinase IUJ44_16555 PF02378 Phosphotransferase system, EIIC IUJ44_16555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IUJ44_16575 PF00563 EAL domain IUJ44_16575 PF03707 Bacterial signalling protein N terminal repeat IUJ44_16575 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_16585 PF07995 Glucose / Sorbosone dehydrogenase IUJ44_16590 PF02586 SOS response associated peptidase (SRAP) IUJ44_16595 PF01740 STAS domain IUJ44_16595 PF00916 Sulfate permease family IUJ44_16600 PF05922 Peptidase inhibitor I9 IUJ44_16600 PF00082 Subtilase family IUJ44_16610 PF00324 Amino acid permease IUJ44_16615 PF00266 Aminotransferase class-V IUJ44_16620 PF01037 Lrp/AsnC ligand binding domain IUJ44_16645 PF13419 Haloacid dehalogenase-like hydrolase IUJ44_16650 PF01479 S4 domain IUJ44_16655 PF00154 recA bacterial DNA recombination protein IUJ44_16660 PF02631 RecX family IUJ44_16675 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IUJ44_16675 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_16680 PF07977 FabA-like domain IUJ44_16685 PF00132 Bacterial transferase hexapeptide (six repeats) IUJ44_16685 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IUJ44_16695 PF01103 Surface antigen IUJ44_16695 PF07244 Surface antigen variable number repeat IUJ44_16700 PF13180 PDZ domain IUJ44_16700 PF17820 PDZ domain IUJ44_16700 PF02163 Peptidase family M50 IUJ44_16705 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IUJ44_16705 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IUJ44_16705 PF13288 DXP reductoisomerase C-terminal domain IUJ44_16715 PF01255 Putative undecaprenyl diphosphate synthase IUJ44_16720 PF01765 Ribosome recycling factor IUJ44_16725 PF00696 Amino acid kinase family IUJ44_16730 PF04055 Radical SAM superfamily IUJ44_16730 PF18693 TRAM domain IUJ44_16730 PF00919 Uncharacterized protein family UPF0004 IUJ44_16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_16740 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_16740 PF00989 PAS fold IUJ44_16745 PF02954 Bacterial regulatory protein, Fis family IUJ44_16745 PF00072 Response regulator receiver domain IUJ44_16745 PF00158 Sigma-54 interaction domain IUJ44_16750 PF00440 Bacterial regulatory proteins, tetR family IUJ44_16755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IUJ44_16755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IUJ44_16765 PF02542 YgbB family IUJ44_16775 PF01266 FAD dependent oxidoreductase IUJ44_16795 PF00206 Lyase IUJ44_16795 PF10415 Fumarase C C-terminus IUJ44_16800 PF16363 GDP-mannose 4,6 dehydratase IUJ44_16805 PF02635 DsrE/DsrF-like family IUJ44_16825 PF00892 EamA-like transporter family IUJ44_16830 PF00392 Bacterial regulatory proteins, gntR family IUJ44_16830 PF00155 Aminotransferase class I and II IUJ44_16835 PF01638 HxlR-like helix-turn-helix IUJ44_16840 PF00994 Probable molybdopterin binding domain IUJ44_16840 PF03453 MoeA N-terminal region (domain I and II) IUJ44_16840 PF03454 MoeA C-terminal region (domain IV) IUJ44_16845 PF01967 MoaC family IUJ44_16845 PF00994 Probable molybdopterin binding domain IUJ44_16850 PF02391 MoaE protein IUJ44_16860 PF06463 Molybdenum Cofactor Synthesis C IUJ44_16860 PF04055 Radical SAM superfamily IUJ44_16870 PF12804 MobA-like NTP transferase domain IUJ44_16875 PF04324 BFD-like [2Fe-2S] binding domain IUJ44_16875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IUJ44_16875 PF00384 Molybdopterin oxidoreductase IUJ44_16875 PF01568 Molydopterin dinucleotide binding domain IUJ44_16880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IUJ44_16880 PF18267 Rubredoxin NAD+ reductase C-terminal domain IUJ44_16880 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_16880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IUJ44_16880 PF04324 BFD-like [2Fe-2S] binding domain IUJ44_16885 PF04324 BFD-like [2Fe-2S] binding domain IUJ44_16885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IUJ44_16885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IUJ44_16885 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_16885 PF13806 Rieske-like [2Fe-2S] domain IUJ44_16885 PF18267 Rubredoxin NAD+ reductase C-terminal domain IUJ44_16895 PF00072 Response regulator receiver domain IUJ44_16895 PF00486 Transcriptional regulatory protein, C terminal IUJ44_16900 PF00005 ABC transporter IUJ44_16910 PF13438 Domain of unknown function (DUF4113) IUJ44_16910 PF00817 impB/mucB/samB family IUJ44_16910 PF11799 impB/mucB/samB family C-terminal domain IUJ44_16915 PF01220 Dehydroquinase class II IUJ44_16920 PF00364 Biotin-requiring enzyme IUJ44_16925 PF00289 Biotin carboxylase, N-terminal domain IUJ44_16925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUJ44_16925 PF02785 Biotin carboxylase C-terminal domain IUJ44_16935 PF12832 MFS_1 like family IUJ44_16955 PF01645 Conserved region in glutamate synthase IUJ44_16970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IUJ44_16970 PF01565 FAD binding domain IUJ44_16975 PF01451 Low molecular weight phosphotyrosine protein phosphatase IUJ44_16985 PF00465 Iron-containing alcohol dehydrogenase IUJ44_16990 PF03061 Thioesterase superfamily IUJ44_16995 PF04185 Phosphoesterase family IUJ44_16995 PF05506 Domain of unknown function (DUF756) IUJ44_17005 PF12169 DNA polymerase III subunits gamma and tau domain III IUJ44_17005 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IUJ44_17005 PF12170 DNA polymerase III tau subunit V interacting with alpha IUJ44_17010 PF07690 Major Facilitator Superfamily IUJ44_17025 PF01575 MaoC like domain IUJ44_17035 PF02803 Thiolase, C-terminal domain IUJ44_17035 PF00108 Thiolase, N-terminal domain IUJ44_17045 PF03466 LysR substrate binding domain IUJ44_17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_17050 PF00923 Transaldolase/Fructose-6-phosphate aldolase IUJ44_17055 PF01810 LysE type translocator IUJ44_17060 PF01037 Lrp/AsnC ligand binding domain IUJ44_17065 PF03594 Benzoate membrane transport protein IUJ44_17070 PF02308 MgtC family IUJ44_17075 PF00689 Cation transporting ATPase, C-terminus IUJ44_17075 PF00690 Cation transporter/ATPase, N-terminus IUJ44_17100 PF00582 Universal stress protein family IUJ44_17105 PF00005 ABC transporter IUJ44_17105 PF12848 ABC transporter IUJ44_17125 PF00593 TonB dependent receptor IUJ44_17125 PF07715 TonB-dependent Receptor Plug Domain IUJ44_17155 PF00924 Mechanosensitive ion channel IUJ44_17160 PF00593 TonB dependent receptor IUJ44_17160 PF07715 TonB-dependent Receptor Plug Domain IUJ44_17165 PF00440 Bacterial regulatory proteins, tetR family IUJ44_17175 PF01037 Lrp/AsnC ligand binding domain IUJ44_17180 PF01817 Chorismate mutase type II IUJ44_17205 PF00577 Outer membrane usher protein IUJ44_17205 PF13954 PapC N-terminal domain IUJ44_17205 PF13953 PapC C-terminal domain IUJ44_17220 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IUJ44_17220 PF01433 Peptidase family M1 domain IUJ44_17220 PF11940 Domain of unknown function (DUF3458) Ig-like fold IUJ44_17235 PF02110 Hydroxyethylthiazole kinase family IUJ44_17245 PF05970 PIF1-like helicase IUJ44_17245 PF14493 Helix-turn-helix domain IUJ44_17250 PF00465 Iron-containing alcohol dehydrogenase IUJ44_17265 PF00171 Aldehyde dehydrogenase family IUJ44_17270 PF13520 Amino acid permease IUJ44_17275 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IUJ44_17280 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IUJ44_17285 PF02540 NAD synthase IUJ44_17285 PF00958 GMP synthase C terminal domain IUJ44_17285 PF00117 Glutamine amidotransferase class-I IUJ44_17290 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IUJ44_17290 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUJ44_17295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IUJ44_17300 PF00149 Calcineurin-like phosphoesterase IUJ44_17310 PF00881 Nitroreductase family IUJ44_17320 PF17209 Hfq protein IUJ44_17330 PF08676 MutL C terminal dimerisation domain IUJ44_17330 PF01119 DNA mismatch repair protein, C-terminal domain IUJ44_17335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IUJ44_17340 PF00849 RNA pseudouridylate synthase IUJ44_17340 PF01479 S4 domain IUJ44_17355 PF00849 RNA pseudouridylate synthase IUJ44_17355 PF01479 S4 domain IUJ44_17365 PF04284 Protein of unknown function (DUF441) IUJ44_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_17370 PF03466 LysR substrate binding domain IUJ44_17385 PF07690 Major Facilitator Superfamily IUJ44_17390 PF00027 Cyclic nucleotide-binding domain IUJ44_17390 PF00520 Ion transport protein IUJ44_17400 PF00330 Aconitase family (aconitate hydratase) IUJ44_17400 PF11791 Aconitate B N-terminal domain IUJ44_17400 PF06434 Aconitate hydratase 2 N-terminus IUJ44_17415 PF01103 Surface antigen IUJ44_17415 PF17243 POTRA domain TamA domain 1 IUJ44_17415 PF07244 Surface antigen variable number repeat IUJ44_17420 PF07690 Major Facilitator Superfamily IUJ44_17425 PF03232 Ubiquinone biosynthesis protein COQ7 IUJ44_17435 PF00120 Glutamine synthetase, catalytic domain IUJ44_17440 PF00072 Response regulator receiver domain IUJ44_17440 PF00486 Transcriptional regulatory protein, C terminal IUJ44_17445 PF02702 Osmosensitive K+ channel His kinase sensor domain IUJ44_17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_17445 PF13493 Domain of unknown function (DUF4118) IUJ44_17445 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_17450 PF02669 K+-transporting ATPase, c chain IUJ44_17460 PF03814 Potassium-transporting ATPase A subunit IUJ44_17475 PF03109 ABC1 family IUJ44_17480 PF00899 ThiF family IUJ44_17485 PF01613 Flavin reductase like domain IUJ44_17490 PF13193 AMP-binding enzyme C-terminal domain IUJ44_17490 PF00501 AMP-binding enzyme IUJ44_17500 PF00106 short chain dehydrogenase IUJ44_17505 PF12833 Helix-turn-helix domain IUJ44_17510 PF17827 PrmC N-terminal domain IUJ44_17510 PF13847 Methyltransferase domain IUJ44_17515 PF00472 RF-1 domain IUJ44_17515 PF03462 PCRF domain IUJ44_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_17525 PF03466 LysR substrate binding domain IUJ44_17540 PF00296 Luciferase-like monooxygenase IUJ44_17550 PF13994 PgaD-like protein IUJ44_17555 PF00535 Glycosyl transferase family 2 IUJ44_17560 PF01522 Polysaccharide deacetylase IUJ44_17560 PF14883 Hypothetical glycosyl hydrolase family 13 IUJ44_17570 PF03618 Kinase/pyrophosphorylase IUJ44_17575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IUJ44_17575 PF00391 PEP-utilising enzyme, mobile domain IUJ44_17575 PF02896 PEP-utilising enzyme, TIM barrel domain IUJ44_17585 PF06481 COX Aromatic Rich Motif IUJ44_17585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IUJ44_17590 PF00115 Cytochrome C and Quinol oxidase polypeptide I IUJ44_17595 PF00510 Cytochrome c oxidase subunit III IUJ44_17600 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IUJ44_17605 PF01040 UbiA prenyltransferase family IUJ44_17610 PF01250 Ribosomal protein S6 IUJ44_17615 PF01084 Ribosomal protein S18 IUJ44_17620 PF01281 Ribosomal protein L9, N-terminal domain IUJ44_17620 PF03948 Ribosomal protein L9, C-terminal domain IUJ44_17625 PF03796 DnaB-like helicase C terminal domain IUJ44_17625 PF00772 DnaB-like helicase N terminal domain IUJ44_17630 PF01168 Alanine racemase, N-terminal domain IUJ44_17630 PF00842 Alanine racemase, C-terminal domain IUJ44_17640 PF08379 Bacterial transglutaminase-like N-terminal region IUJ44_17640 PF01841 Transglutaminase-like superfamily IUJ44_17650 PF14403 Circularly permuted ATP-grasp type 2 IUJ44_17660 PF13932 GidA associated domain IUJ44_17660 PF01134 Glucose inhibited division protein A IUJ44_17680 PF02954 Bacterial regulatory protein, Fis family IUJ44_17685 PF01808 AICARFT/IMPCHase bienzyme IUJ44_17685 PF02142 MGS-like domain IUJ44_17690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IUJ44_17690 PF02843 Phosphoribosylglycinamide synthetase, C domain IUJ44_17690 PF02844 Phosphoribosylglycinamide synthetase, N domain IUJ44_17695 PF03180 NLPA lipoprotein IUJ44_17700 PF00005 ABC transporter IUJ44_17700 PF09383 NIL domain IUJ44_17705 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_17710 PF16123 Hydroxyacylglutathione hydrolase C-terminus IUJ44_17710 PF00753 Metallo-beta-lactamase superfamily IUJ44_17720 PF00375 Sodium:dicarboxylate symporter family IUJ44_17740 PF07995 Glucose / Sorbosone dehydrogenase IUJ44_17745 PF00892 EamA-like transporter family IUJ44_17750 PF01177 Asp/Glu/Hydantoin racemase IUJ44_17770 PF00486 Transcriptional regulatory protein, C terminal IUJ44_17770 PF00072 Response regulator receiver domain IUJ44_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_17775 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_17775 PF08521 Two-component sensor kinase N-terminal IUJ44_17815 PF00672 HAMP domain IUJ44_17815 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_17820 PF00072 Response regulator receiver domain IUJ44_17820 PF00486 Transcriptional regulatory protein, C terminal IUJ44_17830 PF00576 HIUase/Transthyretin family IUJ44_17840 PF02470 MlaD protein IUJ44_17845 PF04403 Paraquat-inducible protein A IUJ44_17875 PF00293 NUDIX domain IUJ44_17880 PF00083 Sugar (and other) transporter IUJ44_17880 PF08946 Osmosensory transporter coiled coil IUJ44_17935 PF00392 Bacterial regulatory proteins, gntR family IUJ44_17935 PF07729 FCD domain IUJ44_17945 PF03616 Sodium/glutamate symporter IUJ44_17950 PF00561 alpha/beta hydrolase fold IUJ44_17975 PF04076 Bacterial OB fold (BOF) protein IUJ44_18005 PF00324 Amino acid permease IUJ44_18010 PF00171 Aldehyde dehydrogenase family IUJ44_18015 PF00202 Aminotransferase class-III IUJ44_18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_18020 PF03466 LysR substrate binding domain IUJ44_18045 PF00069 Protein kinase domain IUJ44_18065 PF00814 Glycoprotease family IUJ44_18070 PF01165 Ribosomal protein S21 IUJ44_18075 PF09424 Yqey-like protein IUJ44_18080 PF01435 Peptidase family M48 IUJ44_18085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUJ44_18085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUJ44_18100 PF00156 Phosphoribosyl transferase domain IUJ44_18105 PF02674 Colicin V production protein IUJ44_18110 PF01180 Dihydroorotate dehydrogenase IUJ44_18130 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IUJ44_18130 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IUJ44_18135 PF00881 Nitroreductase family IUJ44_18145 PF00271 Helicase conserved C-terminal domain IUJ44_18145 PF00270 DEAD/DEAH box helicase IUJ44_18150 PF00313 'Cold-shock' DNA-binding domain IUJ44_18160 PF04542 Sigma-70 region 2 IUJ44_18160 PF04545 Sigma-70, region 4 IUJ44_18160 PF00140 Sigma-70 factor, region 1.2 IUJ44_18165 PF04241 Protein of unknown function (DUF423) IUJ44_18175 PF05690 Thiazole biosynthesis protein ThiG IUJ44_18185 PF03883 Peroxide stress protein YaaA IUJ44_18195 PF00753 Metallo-beta-lactamase superfamily IUJ44_18200 PF01546 Peptidase family M20/M25/M40 IUJ44_18200 PF07687 Peptidase dimerisation domain IUJ44_18210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IUJ44_18215 PF01817 Chorismate mutase type II IUJ44_18215 PF01842 ACT domain IUJ44_18215 PF00800 Prephenate dehydratase IUJ44_18220 PF00756 Putative esterase IUJ44_18225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_18225 PF02770 Acyl-CoA dehydrogenase, middle domain IUJ44_18225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_18230 PF00375 Sodium:dicarboxylate symporter family IUJ44_18235 PF02885 Glycosyl transferase family, helical bundle domain IUJ44_18235 PF00591 Glycosyl transferase family, a/b domain IUJ44_18240 PF07023 Protein of unknown function (DUF1315) IUJ44_18245 PF01513 ATP-NAD kinase IUJ44_18250 PF00912 Transglycosylase IUJ44_18250 PF00905 Penicillin binding protein transpeptidase domain IUJ44_18250 PF14814 Bifunctional transglycosylase second domain IUJ44_18260 PF00293 NUDIX domain IUJ44_18270 PF00512 His Kinase A (phospho-acceptor) domain IUJ44_18270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUJ44_18270 PF08521 Two-component sensor kinase N-terminal IUJ44_18275 PF00072 Response regulator receiver domain IUJ44_18275 PF00486 Transcriptional regulatory protein, C terminal IUJ44_18280 PF04076 Bacterial OB fold (BOF) protein IUJ44_18285 PF00437 Type II/IV secretion system protein IUJ44_18285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IUJ44_18295 PF18389 TrmO C-terminal domain IUJ44_18295 PF01980 tRNA-methyltransferase O IUJ44_18300 PF00970 Oxidoreductase FAD-binding domain IUJ44_18300 PF00175 Oxidoreductase NAD-binding domain IUJ44_18305 PF02567 Phenazine biosynthesis-like protein IUJ44_18310 PF00392 Bacterial regulatory proteins, gntR family IUJ44_18310 PF00155 Aminotransferase class I and II IUJ44_18315 PF01136 Peptidase family U32 IUJ44_18315 PF16325 Peptidase family U32 C-terminal domain IUJ44_18320 PF00037 4Fe-4S binding domain IUJ44_18325 PF00893 Small Multidrug Resistance protein IUJ44_18330 PF00005 ABC transporter IUJ44_18335 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_18340 PF00528 Binding-protein-dependent transport system inner membrane component IUJ44_18345 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUJ44_18350 PF03466 LysR substrate binding domain IUJ44_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUJ44_18355 PF13533 Biotin-lipoyl like IUJ44_18360 PF00873 AcrB/AcrD/AcrF family IUJ44_18365 PF02321 Outer membrane efflux protein IUJ44_18370 PF00464 Serine hydroxymethyltransferase IUJ44_18650 PF00772 DnaB-like helicase N terminal domain IUJ44_18650 PF14528 LAGLIDADG-like domain IUJ44_18650 PF03796 DnaB-like helicase C terminal domain IUJ44_18725 PF06630 Enterobacterial exodeoxyribonuclease VIII IUJ44_18725 PF12684 PDDEXK-like domain of unknown function (DUF3799) IUJ44_18755 PF10548 P22AR C-terminal domain IUJ44_18755 PF02498 BRO family, N-terminal domain IUJ44_18760 PF00589 Phage integrase family IUJ44_18765 PF00005 ABC transporter IUJ44_18770 PF01061 ABC-2 type transporter IUJ44_18775 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IUJ44_18775 PF14489 QueF-like protein IUJ44_18785 PF01098 Cell cycle protein IUJ44_18790 PF13406 Transglycosylase SLT domain IUJ44_18795 PF03330 Lytic transglycolase IUJ44_18795 PF05036 Sporulation related domain IUJ44_18815 PF12833 Helix-turn-helix domain IUJ44_18825 PF00889 Elongation factor TS IUJ44_18830 PF00318 Ribosomal protein S2 IUJ44_18835 PF00557 Metallopeptidase family M24 IUJ44_18845 PF07690 Major Facilitator Superfamily IUJ44_18855 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUJ44_18855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUJ44_18860 PF04055 Radical SAM superfamily IUJ44_18865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUJ44_18865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUJ44_18865 PF09317 Domain of unknown function (DUF1974) IUJ44_18880 PF05221 S-adenosyl-L-homocysteine hydrolase IUJ44_18880 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IUJ44_18885 PF02219 Methylenetetrahydrofolate reductase IUJ44_18890 PF04452 RNA methyltransferase IUJ44_18895 PF00563 EAL domain IUJ44_18895 PF00990 Diguanylate cyclase, GGDEF domain IUJ44_18895 PF03707 Bacterial signalling protein N terminal repeat IUJ44_18900 PF03949 Malic enzyme, NAD binding domain IUJ44_18900 PF00390 Malic enzyme, N-terminal domain IUJ44_18900 PF01515 Phosphate acetyl/butaryl transferase IUJ44_18905 PF12627 Probable RNA and SrmB- binding site of polymerase A IUJ44_18905 PF01743 Poly A polymerase head domain IUJ44_18910 PF13180 PDZ domain IUJ44_18915 PF01784 NIF3 (NGG1p interacting factor 3) IUJ44_18920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IUJ44_18920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IUJ44_18955 PF01040 UbiA prenyltransferase family IUJ44_18960 PF04345 Chorismate lyase IUJ44_18965 PF00120 Glutamine synthetase, catalytic domain IUJ44_18965 PF03951 Glutamine synthetase, beta-Grasp domain IUJ44_18970 PF00854 POT family IUJ44_18980 PF00117 Glutamine amidotransferase class-I IUJ44_18985 PF11838 ERAP1-like C-terminal domain IUJ44_18985 PF01433 Peptidase family M1 domain IUJ44_18990 PF07715 TonB-dependent Receptor Plug Domain IUJ44_18990 PF00593 TonB dependent receptor IUJ44_18995 PF02885 Glycosyl transferase family, helical bundle domain IUJ44_18995 PF00591 Glycosyl transferase family, a/b domain IUJ44_19000 PF00218 Indole-3-glycerol phosphate synthase