locus-tag	class	description
IUJ44_00015	COG1529	Aldehyde oxidase and xanthine dehydrogenase
IUJ44_00025	COG0302	gtp cyclohydrolase
IUJ44_00045	COG3739	integral membrane protein
IUJ44_00060	COG1169	isochorismate synthase
IUJ44_00070	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
IUJ44_00075	COG1132	(ABC) transporter
IUJ44_00080	COG1132	(ABC) transporter
IUJ44_00090	COG1535	isochorismatase
IUJ44_00090	COG3433	isochorismatase activity
IUJ44_00095	COG1021	2,3-dihydroxybenzoate-AMP ligase
IUJ44_00100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IUJ44_00110	COG4774	siderophore transport
IUJ44_00115	COG4607	ABC-type enterochelin transport system periplasmic component
IUJ44_00120	COG4604	ABC transporter, ATP-binding protein
IUJ44_00125	COG4605	iron ion homeostasis
IUJ44_00130	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IUJ44_00135	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IUJ44_00150	COG2964	Protein conserved in bacteria
IUJ44_00160	COG1741	Belongs to the pirin family
IUJ44_00190	COG2879	small protein
IUJ44_00195	COG1966	Carbon starvation protein
IUJ44_00215	COG4943	cyclic-guanylate-specific phosphodiesterase activity
IUJ44_00240	COG1067	ATP-dependent peptidase activity
IUJ44_00245	COG0583	DNA-binding transcription factor activity
IUJ44_00270	COG1686	Belongs to the peptidase S11 family
IUJ44_00275	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IUJ44_00310	COG0616	signal peptide processing
IUJ44_00315	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
IUJ44_00325	COG0573	inorganic phosphate transmembrane transporter activity
IUJ44_00330	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IUJ44_00335	COG1113	amino acid transport
IUJ44_00340	COG3961	Belongs to the TPP enzyme family
IUJ44_00345	COG1522	sequence-specific DNA binding
IUJ44_00355	COG0076	glutamate decarboxylase activity
IUJ44_00360	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IUJ44_00375	COG2249	NAD(P)H dehydrogenase (quinone) activity
IUJ44_00385	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IUJ44_00420	COG0352	thiamine-phosphate diphosphorylase activity
IUJ44_00445	COG0612	Peptidase, M16
IUJ44_00455	COG1823	symporter activity
IUJ44_00460	COG0583	DNA-binding transcription factor activity
IUJ44_00465	COG0477	Major facilitator Superfamily
IUJ44_00490	COG1187	pseudouridine synthase activity
IUJ44_00505	COG1686	Belongs to the peptidase S11 family
IUJ44_00510	COG1252	NADH dehydrogenase
IUJ44_00520	COG0415	Belongs to the DNA photolyase family
IUJ44_00535	COG1215	transferase activity, transferring glycosyl groups
IUJ44_00565	COG2070	2-Nitropropane dioxygenase
IUJ44_00620	COG0556	nucleotide-excision repair
IUJ44_00640	COG0436	Aminotransferase
IUJ44_00650	COG0443	Heat shock 70 kDa protein
IUJ44_00680	COG4221	oxidoreductase activity
IUJ44_00690	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
IUJ44_00695	COG1381	Involved in DNA repair and RecF pathway recombination
IUJ44_00705	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IUJ44_00720	COG0681	Belongs to the peptidase S26 family
IUJ44_00735	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IUJ44_00755	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IUJ44_00760	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IUJ44_00765	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
IUJ44_00775	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
IUJ44_00780	COG4208	sulfate ABC transporter
IUJ44_00785	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
IUJ44_00790	COG0583	DNA-binding transcription factor activity
IUJ44_00795	COG4625	pathogenesis
IUJ44_00810	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
IUJ44_00825	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IUJ44_00835	COG1056	cytidyltransferase-related domain
IUJ44_00835	COG1051	belongs to the nudix hydrolase family
IUJ44_00840	COG1024	Enoyl-CoA hydratase
IUJ44_00850	COG2814	Major facilitator Superfamily
IUJ44_00855	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IUJ44_00855	COG0047	phosphoribosylformylglycinamidine synthase activity
IUJ44_00875	COG1473	amidohydrolase
IUJ44_00880	COG0824	Thioesterase
IUJ44_00900	COG0823	Involved in the tonB-independent uptake of proteins
IUJ44_00920	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IUJ44_00955	COG0628	permease
IUJ44_00965	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IUJ44_00970	COG0596	Alpha beta hydrolase
IUJ44_00975	COG0616	signal peptide processing
IUJ44_00975	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
IUJ44_00985	COG0658	competence protein
IUJ44_00985	COG2333	competence protein COMEC
IUJ44_00990	COG1136	(ABC) transporter
IUJ44_00995	COG4591	ABC-type transport system involved in lipoprotein release permease component
IUJ44_01030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUJ44_01050	COG0463	Glycosyl transferase, family 2
IUJ44_01080	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IUJ44_01085	COG1280	lysine exporter protein (LysE YggA)
IUJ44_01090	COG2267	carboxylic ester hydrolase activity
IUJ44_01105	COG0019	diaminopimelate decarboxylase activity
IUJ44_01115	COG1113	amino acid transport
IUJ44_01130	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
IUJ44_01140	COG3339	Conserved Protein
IUJ44_01145	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
IUJ44_01150	COG0243	molybdopterin cofactor binding
IUJ44_01155	COG1929	Belongs to the glycerate kinase type-1 family
IUJ44_01170	COG0778	Nitroreductase
IUJ44_01195	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IUJ44_01210	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IUJ44_01230	COG0741	lytic transglycosylase activity
IUJ44_01250	COG0584	glycerophosphoryl diester phosphodiesterase
IUJ44_01255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IUJ44_01280	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IUJ44_01285	COG1597	lipid kinase activity
IUJ44_01300	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IUJ44_01305	COG0477	Major facilitator Superfamily
IUJ44_01355	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IUJ44_01360	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IUJ44_01385	COG0505	Belongs to the CarA family
IUJ44_01405	COG0589	response to stress
IUJ44_01420	COG2843	Capsule synthesis protein
IUJ44_01440	COG2321	neutral zinc metallopeptidase
IUJ44_01445	COG2354	Protein conserved in bacteria
IUJ44_01465	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IUJ44_01490	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IUJ44_01495	COG1053	succinate dehydrogenase
IUJ44_01500	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IUJ44_01505	COG2009	succinate dehydrogenase
IUJ44_01540	COG2921	Belongs to the UPF0250 family
IUJ44_01545	COG0321	lipoyl(octanoyl) transferase activity
IUJ44_01560	COG0531	amino acid
IUJ44_01575	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IUJ44_01580	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IUJ44_01580	COG1648	precorrin-2 dehydrogenase activity
IUJ44_01595	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
IUJ44_01625	COG0671	phosphoesterase, PA-phosphatase related
IUJ44_01630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUJ44_01640	COG1538	Outer membrane efflux protein
IUJ44_01645	COG0393	Putative heavy-metal-binding
IUJ44_01650	COG0393	Putative heavy-metal-binding
IUJ44_01660	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_01670	COG0525	valine-tRNA ligase activity
IUJ44_01690	COG0583	DNA-binding transcription factor activity
IUJ44_01695	COG0004	ammonium transporteR
IUJ44_01710	COG0642	Histidine kinase
IUJ44_01715	COG0745	RESPONSE REGULATOR receiver
IUJ44_01720	COG2194	sulfuric ester hydrolase activity
IUJ44_01740	COG1752	Esterase of the alpha-beta hydrolase superfamily
IUJ44_01755	COG2315	Protein conserved in bacteria
IUJ44_01760	COG0142	geranyltranstransferase activity
IUJ44_01765	COG2828	Protein conserved in bacteria
IUJ44_01770	COG1113	amino acid transport
IUJ44_01790	COG2207	Transcriptional regulator
IUJ44_01815	COG2249	NAD(P)H dehydrogenase (quinone) activity
IUJ44_01825	COG0560	Phosphoserine phosphatase
IUJ44_01835	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IUJ44_01845	COG1530	ribonuclease E activity
IUJ44_01850	COG0424	maF-like protein
IUJ44_01855	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
IUJ44_01860	COG1792	Involved in formation and maintenance of cell shape
IUJ44_01865	COG1077	Cell shape determining protein MreB Mrl
IUJ44_01870	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IUJ44_01880	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IUJ44_01905	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
IUJ44_01910	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IUJ44_01915	COG1752	Esterase of the alpha-beta hydrolase superfamily
IUJ44_01920	COG1115	amino acid carrier protein
IUJ44_01940	COG2814	Major facilitator Superfamily
IUJ44_01945	COG1289	transmembrane transporter activity
IUJ44_01955	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IUJ44_01995	COG1376	ErfK ybiS ycfS ynhG family protein
IUJ44_02000	COG2832	Protein of unknown function (DUF454)
IUJ44_02010	COG5510	response to toxic substance
IUJ44_02030	COG0840	transmembrane signaling receptor activity
IUJ44_02070	COG3422	double-strand break repair
IUJ44_02075	COG2824	Alkylphosphonate utilization operon protein PhnA
IUJ44_02080	COG3189	MarR family transcriptional regulator
IUJ44_02090	COG0354	folic acid binding
IUJ44_02095	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IUJ44_02105	COG0679	Auxin Efflux Carrier
IUJ44_02110	COG1902	pentaerythritol trinitrate reductase activity
IUJ44_02115	COG4772	TonB-dependent receptor
IUJ44_02120	COG2094	Belongs to the DNA glycosylase MPG family
IUJ44_02145	COG1217	gtp-binding protein TYPA
IUJ44_02150	COG2233	PERMEase
IUJ44_02160	COG0833	amino acid
IUJ44_02165	COG1690	Belongs to the RtcB family
IUJ44_02175	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
IUJ44_02175	COG2885	chlorophyll binding
IUJ44_02185	COG0183	Belongs to the thiolase family
IUJ44_02205	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IUJ44_02225	COG2207	Transcriptional regulator
IUJ44_02230	COG0183	Belongs to the thiolase family
IUJ44_02260	COG1272	protein, Hemolysin III
IUJ44_02265	COG0477	Major facilitator Superfamily
IUJ44_02280	COG0450	alkyl hydroperoxide reductase
IUJ44_02300	COG0285	dihydrofolate synthase activity
IUJ44_02345	COG4206	TonB-dependent receptor
IUJ44_02350	COG2096	Adenosyltransferase
IUJ44_02370	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
IUJ44_02375	COG0745	RESPONSE REGULATOR receiver
IUJ44_02380	COG2205	protein histidine kinase activity
IUJ44_02390	COG1960	acyl-CoA dehydrogenase activity
IUJ44_02395	COG1960	acyl-CoA dehydrogenase activity
IUJ44_02400	COG0583	DNA-binding transcription factor activity
IUJ44_02405	COG0625	glutathione transferase activity
IUJ44_02470	COG0438	transferase activity, transferring glycosyl groups
IUJ44_02475	COG0463	Glycosyl transferase, family 2
IUJ44_02480	COG0726	polysaccharide deacetylase
IUJ44_02500	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
IUJ44_02505	COG2205	protein histidine kinase activity
IUJ44_02540	COG1862	Preprotein translocase
IUJ44_02550	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IUJ44_02555	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IUJ44_02565	COG3781	membrane
IUJ44_02570	COG0613	PHP domain protein
IUJ44_02580	COG2350	Protein conserved in bacteria
IUJ44_02610	COG1607	acyl-coa hydrolase
IUJ44_02670	COG2199	diguanylate cyclase activity
IUJ44_02680	COG1408	metallophosphoesterase
IUJ44_02685	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IUJ44_02695	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IUJ44_02715	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
IUJ44_02720	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
IUJ44_02735	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
IUJ44_02745	COG2969	positive regulation of protein catabolic process
IUJ44_02765	COG1960	acyl-CoA dehydrogenase activity
IUJ44_02770	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
IUJ44_02785	COG1309	transcriptional regulator
IUJ44_02790	COG1960	acyl-CoA dehydrogenase activity
IUJ44_02835	COG1183	phosphatidylcholine synthase activity
IUJ44_02840	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
IUJ44_02870	COG0739	heme binding
IUJ44_02870	COG0741	lytic transglycosylase activity
IUJ44_02870	COG1196	nuclear chromosome segregation
IUJ44_02880	COG1702	phosphate starvation-inducible protein PhoH
IUJ44_02915	COG1295	ribonuclease BN
IUJ44_02920	COG0697	spore germination
IUJ44_02925	COG2169	Transcriptional regulator
IUJ44_02930	COG0179	Fumarylacetoacetate (FAA) hydrolase
IUJ44_02975	COG0557	exoribonuclease II activity
IUJ44_02980	COG0339	signal peptide processing
IUJ44_02985	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
IUJ44_03015	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
IUJ44_03020	COG1960	acyl-CoA dehydrogenase activity
IUJ44_03175	COG0626	cystathionine gamma-synthase activity
IUJ44_03180	COG0433	COG0433 Predicted ATPase
IUJ44_03185	COG1017	nitric oxide dioxygenase activity
IUJ44_03185	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IUJ44_03190	COG1959	2 iron, 2 sulfur cluster binding
IUJ44_03205	COG1301	dicarboxylic acid transport
IUJ44_03210	COG1946	Acyl-CoA thioesterase
IUJ44_03230	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IUJ44_03235	COG1040	competence protein
IUJ44_03240	COG0494	nUDIX hydrolase
IUJ44_03250	COG0598	Magnesium transport protein CorA
IUJ44_03260	COG2854	intermembrane phospholipid transfer
IUJ44_03270	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IUJ44_03275	COG1127	ABC transporter
IUJ44_03285	COG0513	Belongs to the DEAD box helicase family
IUJ44_03305	COG0408	coproporphyrinogen oxidase activity
IUJ44_03320	COG1960	acyl-CoA dehydrogenase activity
IUJ44_03330	COG1983	PspC domain protein
IUJ44_03335	COG0517	IMP dehydrogenase activity
IUJ44_03375	COG0583	DNA-binding transcription factor activity
IUJ44_03415	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_03425	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IUJ44_03430	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
IUJ44_03435	COG0833	amino acid
IUJ44_03465	COG1192	Involved in chromosome partitioning
IUJ44_03470	COG0628	permease
IUJ44_03480	COG1289	transmembrane transporter activity
IUJ44_03495	COG2249	NAD(P)H dehydrogenase (quinone) activity
IUJ44_03500	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
IUJ44_03510	COG0277	FAD linked oxidase domain protein
IUJ44_03515	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IUJ44_03540	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IUJ44_03545	COG5380	lipid catabolic process
IUJ44_03565	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IUJ44_03615	COG0194	GDP metabolic process
IUJ44_03630	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IUJ44_03650	COG3307	-O-antigen
IUJ44_03670	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
IUJ44_03675	COG1704	LemA family
IUJ44_03685	COG0493	'glutamate synthase
IUJ44_03690	COG0067	glutamate synthase
IUJ44_03690	COG0070	glutamate synthase
IUJ44_03690	COG0069	glutamate synthase activity
IUJ44_03740	COG2226	methyltransferase
IUJ44_03755	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IUJ44_03760	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IUJ44_03805	COG0833	amino acid
IUJ44_03870	COG0488	(ABC) transporter
IUJ44_03875	COG2873	o-acetylhomoserine
IUJ44_03880	COG4221	oxidoreductase activity
IUJ44_03885	COG0659	secondary active sulfate transmembrane transporter activity
IUJ44_03910	COG0427	acetyl-CoA hydrolase
IUJ44_03940	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
IUJ44_03980	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
IUJ44_04050	COG2249	NAD(P)H dehydrogenase (quinone) activity
IUJ44_04055	COG1733	regulation of RNA biosynthetic process
IUJ44_04085	COG0667	Aldo Keto reductase
IUJ44_04105	COG0583	DNA-binding transcription factor activity
IUJ44_04110	COG2814	Major facilitator Superfamily
IUJ44_04140	COG1335	isochorismatase
IUJ44_04150	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_04155	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IUJ44_04165	COG1113	amino acid transport
IUJ44_04175	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
IUJ44_04225	COG2814	Major facilitator Superfamily
IUJ44_04235	COG0351	phosphomethylpyrimidine kinase
IUJ44_04235	COG0352	thiamine-phosphate diphosphorylase activity
IUJ44_04235	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
IUJ44_04255	COG1309	transcriptional regulator
IUJ44_04260	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
IUJ44_04275	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IUJ44_04285	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IUJ44_04290	COG3162	membrane
IUJ44_04295	COG2198	Histidine kinase
IUJ44_04295	COG2205	protein histidine kinase activity
IUJ44_04295	COG0784	Response regulator, receiver
IUJ44_04320	COG1522	sequence-specific DNA binding
IUJ44_04325	COG1335	isochorismatase
IUJ44_04330	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IUJ44_04340	COG0668	transmembrane transport
IUJ44_04345	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IUJ44_04350	COG1519	Transferase
IUJ44_04355	COG1902	pentaerythritol trinitrate reductase activity
IUJ44_04375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IUJ44_04400	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IUJ44_04400	COG0426	domain, Protein
IUJ44_04405	COG4774	siderophore transport
IUJ44_04410	COG2119	membrane
IUJ44_04420	COG0508	dehydrogenase complex catalyzes the overall conversion of
IUJ44_04430	COG4942	peptidase
IUJ44_04445	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IUJ44_04455	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IUJ44_04475	COG0189	ligase activity
IUJ44_04495	COG0708	Exodeoxyribonuclease III
IUJ44_04500	COG1393	Belongs to the ArsC family
IUJ44_04515	COG3706	GGDEF domain
IUJ44_04550	COG2351	hydroxyisourate hydrolase activity
IUJ44_04555	COG2233	PERMEase
IUJ44_04565	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUJ44_04575	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
IUJ44_04580	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_04590	COG3150	esterase
IUJ44_04605	COG3179	chitinase
IUJ44_04620	COG2918	glutathione biosynthetic process
IUJ44_04635	COG2733	membrane
IUJ44_04640	COG0436	Aminotransferase
IUJ44_04645	COG0534	Mate efflux family protein
IUJ44_04695	COG0753	catalase activity
IUJ44_04740	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
IUJ44_04745	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IUJ44_04755	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IUJ44_04760	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
IUJ44_04765	COG0546	phosphoglycolate phosphatase activity
IUJ44_04775	COG0010	Belongs to the arginase family
IUJ44_04805	COG2188	Transcriptional regulator
IUJ44_04815	COG0523	cobalamin synthesis protein
IUJ44_04825	COG1113	amino acid transport
IUJ44_04835	COG0625	glutathione transferase activity
IUJ44_04855	COG1683	Conserved Protein
IUJ44_04865	COG0385	Bile acid
IUJ44_04870	COG1335	isochorismatase
IUJ44_04875	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IUJ44_04895	COG2116	formate transmembrane transporter activity
IUJ44_04900	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IUJ44_04905	COG2133	pyrroloquinoline quinone binding
IUJ44_04910	COG2983	Belongs to the UPF0260 family
IUJ44_04930	COG1194	a g-specific adenine glycosylase
IUJ44_04945	COG2818	Glycosylase
IUJ44_04950	COG1064	alcohol dehydrogenase
IUJ44_04955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IUJ44_04970	COG0583	DNA-binding transcription factor activity
IUJ44_04975	COG0656	L-ascorbic acid biosynthetic process
IUJ44_04980	COG2814	Major facilitator Superfamily
IUJ44_05015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUJ44_05030	COG2233	PERMEase
IUJ44_05035	COG0583	DNA-binding transcription factor activity
IUJ44_05070	COG0733	neurotransmitter:sodium symporter activity
IUJ44_05080	COG0625	glutathione transferase activity
IUJ44_05115	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IUJ44_05120	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
IUJ44_05125	COG0596	Alpha beta hydrolase
IUJ44_05150	COG0488	(ABC) transporter
IUJ44_05155	COG0586	Pfam SNARE associated Golgi protein
IUJ44_05165	COG0187	DNA topoisomerase II activity
IUJ44_05175	COG0592	DNA-directed DNA polymerase activity
IUJ44_05205	COG0706	membrane insertase activity
IUJ44_05220	COG1230	cation diffusion facilitator family transporter
IUJ44_05225	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IUJ44_05240	COG0402	S-adenosylhomocysteine deaminase activity
IUJ44_05250	COG0754	glutathionylspermidine amidase activity
IUJ44_05260	COG0861	Integral membrane protein TerC family
IUJ44_05265	COG0671	phosphoesterase, PA-phosphatase related
IUJ44_05275	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IUJ44_05290	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IUJ44_05295	COG2951	lytic endotransglycosylase activity
IUJ44_05345	COG0657	acetylesterase activity
IUJ44_05350	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IUJ44_05390	COG1047	Peptidyl-prolyl cis-trans
IUJ44_05400	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IUJ44_05405	COG0196	riboflavin kinase activity
IUJ44_05415	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IUJ44_05420	COG1309	transcriptional regulator
IUJ44_05425	COG1116	anion transmembrane transporter activity
IUJ44_05430	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IUJ44_05435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IUJ44_05440	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IUJ44_05445	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IUJ44_05465	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_05470	COG0546	phosphoglycolate phosphatase activity
IUJ44_05570	COG4691	Plasmid stability protein
IUJ44_05605	COG0798	PFAM Bile acid sodium symporter
IUJ44_05665	COG2184	nucleotidyltransferase activity
IUJ44_05770	COG3023	N-Acetylmuramoyl-L-alanine amidase
IUJ44_05775	COG0728	peptidoglycan biosynthetic process
IUJ44_05800	COG1596	polysaccharide export
IUJ44_05805	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IUJ44_05835	COG0438	transferase activity, transferring glycosyl groups
IUJ44_05860	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
IUJ44_05865	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IUJ44_05880	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IUJ44_05885	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IUJ44_05895	COG2186	Transcriptional regulator
IUJ44_05905	COG0277	FAD linked oxidase domain protein
IUJ44_05910	COG1448	Aminotransferase
IUJ44_05915	COG1802	Transcriptional regulator
IUJ44_05930	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
IUJ44_06015	COG0564	pseudouridine synthase activity
IUJ44_06055	COG0251	oxidation-reduction process
IUJ44_06060	COG1113	amino acid transport
IUJ44_06065	COG1113	amino acid transport
IUJ44_06085	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IUJ44_06090	COG1960	acyl-CoA dehydrogenase activity
IUJ44_06095	COG1024	Enoyl-CoA hydratase
IUJ44_06100	COG1024	Enoyl-CoA hydratase
IUJ44_06105	COG0477	Major facilitator Superfamily
IUJ44_06110	COG3916	Acyl-homoserine-lactone synthase
IUJ44_06120	COG2197	response regulator
IUJ44_06130	COG1960	acyl-CoA dehydrogenase activity
IUJ44_06135	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
IUJ44_06135	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IUJ44_06135	COG3321	synthase
IUJ44_06135	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IUJ44_06155	COG2267	carboxylic ester hydrolase activity
IUJ44_06175	COG0271	Belongs to the BolA IbaG family
IUJ44_06185	COG1192	Involved in chromosome partitioning
IUJ44_06200	COG0586	Pfam SNARE associated Golgi protein
IUJ44_06205	COG2259	Doxx family
IUJ44_06210	COG4399	Belongs to the UPF0754 family
IUJ44_06215	COG0519	Catalyzes the synthesis of GMP from XMP
IUJ44_06215	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IUJ44_06260	COG0281	malic enzyme
IUJ44_06265	COG2837	iron assimilation
IUJ44_06270	COG1280	lysine exporter protein (LysE YggA)
IUJ44_06275	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IUJ44_06280	COG1121	(ABC) transporter
IUJ44_06345	COG0386	Belongs to the glutathione peroxidase family
IUJ44_06360	COG1309	transcriptional regulator
IUJ44_06365	COG0697	spore germination
IUJ44_06375	COG0758	DNA mediated transformation
IUJ44_06410	COG1309	transcriptional regulator
IUJ44_06445	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IUJ44_06455	COG0655	NAD(P)H dehydrogenase (quinone) activity
IUJ44_06490	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IUJ44_06500	COG2814	Major facilitator Superfamily
IUJ44_06510	COG1253	flavin adenine dinucleotide binding
IUJ44_06520	COG2860	membrane
IUJ44_06525	COG0477	Major facilitator Superfamily
IUJ44_06535	COG0318	PFAM AMP-dependent synthetase and ligase
IUJ44_06550	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
IUJ44_06565	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IUJ44_06575	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IUJ44_06580	COG0606	chelatase, subunit chli
IUJ44_06590	COG0347	Belongs to the P(II) protein family
IUJ44_06595	COG0004	ammonium transporteR
IUJ44_06605	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IUJ44_06605	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IUJ44_06645	COG0795	lipopolysaccharide-transporting ATPase activity
IUJ44_06650	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IUJ44_06655	COG0793	Belongs to the peptidase S41A family
IUJ44_06670	COG2197	response regulator
IUJ44_06680	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
IUJ44_06690	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IUJ44_06695	COG4974	Belongs to the 'phage' integrase family
IUJ44_06720	COG0772	Belongs to the SEDS family
IUJ44_06725	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IUJ44_06730	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
IUJ44_06735	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IUJ44_06760	COG0697	spore germination
IUJ44_06765	COG1538	Outer membrane efflux protein
IUJ44_06785	COG3275	phosphorelay sensor kinase activity
IUJ44_06795	COG0181	hydroxymethylbilane synthase activity
IUJ44_06840	COG1716	ATPase activity
IUJ44_06845	COG0546	phosphoglycolate phosphatase activity
IUJ44_06945	COG2056	Na+-H+ antiporter family
IUJ44_06960	COG0326	Molecular chaperone. Has ATPase activity
IUJ44_06975	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
IUJ44_07035	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IUJ44_07040	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IUJ44_07040	COG2169	Transcriptional regulator
IUJ44_07070	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IUJ44_07080	COG0497	DNA recombination
IUJ44_07095	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IUJ44_07105	COG0237	dephospho-CoA kinase activity
IUJ44_07150	COG0195	Participates in both transcription termination and antitermination
IUJ44_07165	COG1320	monovalent cation:proton antiporter activity
IUJ44_07170	COG2212	antiporter activity
IUJ44_07175	COG1863	multisubunit Na H antiporter MnhE subunit
IUJ44_07180	COG0651	ATP synthesis coupled electron transport
IUJ44_07185	COG1006	Multisubunit Na H antiporter MnhC subunit
IUJ44_07190	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IUJ44_07190	COG2111	Na H antiporter
IUJ44_07205	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IUJ44_07210	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUJ44_07225	COG2226	methyltransferase
IUJ44_07245	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
IUJ44_07250	COG1074	ATP-dependent DNA helicase activity
IUJ44_07255	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IUJ44_07260	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
IUJ44_07275	COG0598	Magnesium transport protein CorA
IUJ44_07280	COG0789	Transcriptional regulator
IUJ44_07285	COG0484	heat shock protein binding
IUJ44_07300	COG0475	glutathione-regulated potassium exporter activity
IUJ44_07300	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IUJ44_07305	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IUJ44_07325	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IUJ44_07335	COG4535	Mg2 and Co2 transporter CorC
IUJ44_07340	COG0425	Belongs to the sulfur carrier protein TusA family
IUJ44_07345	COG0644	oxidoreductase
IUJ44_07345	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
IUJ44_07355	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
IUJ44_07370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IUJ44_07375	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
IUJ44_07385	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
IUJ44_07385	COG0493	'glutamate synthase
IUJ44_07410	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IUJ44_07425	COG0534	Mate efflux family protein
IUJ44_07435	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IUJ44_07440	COG4221	oxidoreductase activity
IUJ44_07445	COG0583	DNA-binding transcription factor activity
IUJ44_07460	COG0318	PFAM AMP-dependent synthetase and ligase
IUJ44_07465	COG1530	ribonuclease E activity
IUJ44_07475	COG0546	phosphoglycolate phosphatase activity
IUJ44_07480	COG2378	regulation of single-species biofilm formation
IUJ44_07485	COG0625	glutathione transferase activity
IUJ44_07495	COG0583	DNA-binding transcription factor activity
IUJ44_07560	COG0473	3-isopropylmalate dehydrogenase activity
IUJ44_07615	COG1301	dicarboxylic acid transport
IUJ44_07625	COG1560	Kdo2-lipid A biosynthetic process
IUJ44_07630	COG1280	lysine exporter protein (LysE YggA)
IUJ44_07635	COG0488	(ABC) transporter
IUJ44_07640	COG2900	Belongs to the SlyX family
IUJ44_07650	COG1733	regulation of RNA biosynthetic process
IUJ44_07675	COG0210	DNA helicase
IUJ44_07680	COG0724	RNA recognition motif
IUJ44_07700	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IUJ44_07700	COG4651	solute:proton antiporter activity
IUJ44_07725	COG0788	formyltetrahydrofolate deformylase activity
IUJ44_07875	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IUJ44_07875	COG2813	Specifically methylates the guanine in position
IUJ44_07885	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IUJ44_07895	COG4774	siderophore transport
IUJ44_07905	COG0740	serine-type endopeptidase activity
IUJ44_07925	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
IUJ44_07925	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
IUJ44_07930	COG0280	phosphate acetyltransferase
IUJ44_07930	COG0857	belongs to the CobB CobQ family
IUJ44_07935	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IUJ44_07945	COG0800	Aldolase
IUJ44_07955	COG3265	gluconokinase activity
IUJ44_07960	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_07970	COG2267	carboxylic ester hydrolase activity
IUJ44_07985	COG0793	Belongs to the peptidase S41A family
IUJ44_08020	COG1426	Protein conserved in bacteria
IUJ44_08060	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IUJ44_08070	COG1162	GTPase activity
IUJ44_08075	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
IUJ44_08090	COG1538	Outer membrane efflux protein
IUJ44_08095	COG0577	efflux transmembrane transporter activity
IUJ44_08095	COG1136	(ABC) transporter
IUJ44_08100	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUJ44_08125	COG0028	Belongs to the TPP enzyme family
IUJ44_08130	COG0440	acetolactate synthase activity
IUJ44_08160	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IUJ44_08175	COG0084	hydrolase, TatD family'
IUJ44_08190	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IUJ44_08200	COG0583	DNA-binding transcription factor activity
IUJ44_08210	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IUJ44_08215	COG2814	Major facilitator Superfamily
IUJ44_08225	COG0697	spore germination
IUJ44_08255	COG3622	Belongs to the hyi family
IUJ44_08260	COG2084	Dehydrogenase
IUJ44_08265	COG1024	Enoyl-CoA hydratase
IUJ44_08270	COG0784	Response regulator, receiver
IUJ44_08270	COG2205	protein histidine kinase activity
IUJ44_08270	COG5002	protein histidine kinase activity
IUJ44_08290	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IUJ44_08300	COG3956	TIGRFAM MazG family protein
IUJ44_08305	COG1555	photosystem II stabilization
IUJ44_08310	COG0617	tRNA 3'-terminal CCA addition
IUJ44_08315	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IUJ44_08335	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IUJ44_08340	COG3028	Belongs to the UPF0307 family
IUJ44_08345	COG0318	PFAM AMP-dependent synthetase and ligase
IUJ44_08360	COG0625	glutathione transferase activity
IUJ44_08365	COG1238	metal cluster binding
IUJ44_08405	COG0072	phenylalanine-tRNA ligase activity
IUJ44_08435	COG0248	Ppx GppA phosphatase
IUJ44_08445	COG0037	tRNA processing
IUJ44_08460	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IUJ44_08460	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IUJ44_08485	COG1764	response to oxidative stress
IUJ44_08490	COG1846	Transcriptional regulator
IUJ44_08500	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IUJ44_08560	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IUJ44_08565	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
IUJ44_08570	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
IUJ44_08580	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IUJ44_08630	COG1214	PFAM Peptidase M22, glycoprotease
IUJ44_08645	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
IUJ44_08655	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
IUJ44_08660	COG0561	phosphatase activity
IUJ44_08670	COG2132	Multicopper oxidase
IUJ44_08690	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IUJ44_08695	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
IUJ44_08700	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
IUJ44_08730	COG1063	alcohol dehydrogenase
IUJ44_08735	COG0583	DNA-binding transcription factor activity
IUJ44_08740	COG1960	acyl-CoA dehydrogenase activity
IUJ44_08745	COG2814	Major facilitator Superfamily
IUJ44_08750	COG1804	L-carnitine dehydratase bile acid-inducible protein F
IUJ44_08755	COG1309	transcriptional regulator
IUJ44_08770	COG1053	succinate dehydrogenase
IUJ44_08775	COG0583	DNA-binding transcription factor activity
IUJ44_08790	COG0583	DNA-binding transcription factor activity
IUJ44_08800	COG0583	DNA-binding transcription factor activity
IUJ44_08815	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IUJ44_08870	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IUJ44_08890	COG0745	RESPONSE REGULATOR receiver
IUJ44_08930	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
IUJ44_08960	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IUJ44_08965	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IUJ44_08985	COG0583	DNA-binding transcription factor activity
IUJ44_09005	COG0668	transmembrane transport
IUJ44_09015	COG2081	HI0933 family
IUJ44_09020	COG2515	1-aminocyclopropane-1-carboxylate deaminase
IUJ44_09050	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IUJ44_09050	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IUJ44_09060	COG0489	protein tyrosine kinase activity
IUJ44_09065	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IUJ44_09110	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IUJ44_09120	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IUJ44_09135	COG0730	response to heat
IUJ44_09145	COG1196	nuclear chromosome segregation
IUJ44_09165	COG2223	nitrite transmembrane transporter activity
IUJ44_09170	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
IUJ44_09175	COG1877	trehalose-phosphatase activity
IUJ44_09180	COG2226	methyltransferase
IUJ44_09180	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IUJ44_09180	COG0596	Alpha beta hydrolase
IUJ44_09195	COG4106	trans-aconitate 2-methyltransferase activity
IUJ44_09210	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IUJ44_09215	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IUJ44_09220	COG0009	L-threonylcarbamoyladenylate synthase
IUJ44_09225	COG3101	peptidyl-lysine hydroxylation
IUJ44_09230	COG1399	metal-binding, possibly nucleic acid-binding protein
IUJ44_09255	COG1652	LysM domain
IUJ44_09260	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
IUJ44_09260	COG0352	thiamine-phosphate diphosphorylase activity
IUJ44_09260	COG0351	phosphomethylpyrimidine kinase
IUJ44_09270	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IUJ44_09300	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IUJ44_09330	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
IUJ44_09345	COG0358	DNA primase activity
IUJ44_09355	COG0564	pseudouridine synthase activity
IUJ44_09380	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IUJ44_09400	COG0583	DNA-binding transcription factor activity
IUJ44_09405	COG0473	3-isopropylmalate dehydrogenase activity
IUJ44_09415	COG0657	acetylesterase activity
IUJ44_09425	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_09445	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
IUJ44_09445	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IUJ44_09460	COG1981	membrane
IUJ44_09505	COG0456	acetyltransferase
IUJ44_09515	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
IUJ44_09520	COG0492	ferredoxin-NADP+ reductase activity
IUJ44_09525	COG1674	ftsk spoiiie
IUJ44_09530	COG1280	lysine exporter protein (LysE YggA)
IUJ44_09545	COG2894	cell division
IUJ44_09560	COG0204	Acyl-transferase
IUJ44_09565	COG2885	chlorophyll binding
IUJ44_09570	COG0210	DNA helicase
IUJ44_09580	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IUJ44_09595	COG0121	glutamine amidotransferase
IUJ44_09615	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IUJ44_09620	COG0735	belongs to the Fur family
IUJ44_09645	COG0420	3'-5' exonuclease activity
IUJ44_09665	COG1090	epimerase
IUJ44_09680	COG2050	protein possibly involved in aromatic compounds catabolism
IUJ44_09690	COG2814	Major facilitator Superfamily
IUJ44_09695	COG0405	Gamma-glutamyltransferase
IUJ44_09705	COG0582	viral genome integration into host DNA
IUJ44_09750	COG0629	single-stranded DNA binding
IUJ44_09880	COG0477	Major facilitator Superfamily
IUJ44_09885	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IUJ44_09930	COG0531	amino acid
IUJ44_09935	COG2040	homocysteine
IUJ44_09960	COG1309	transcriptional regulator
IUJ44_09965	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IUJ44_09970	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IUJ44_09980	COG1607	acyl-coa hydrolase
IUJ44_09990	COG0523	cobalamin synthesis protein
IUJ44_10000	COG4681	YaeQ
IUJ44_10010	COG0726	polysaccharide deacetylase
IUJ44_10010	COG1649	PFAM Uncharacterised BCR, COG1649
IUJ44_10015	COG1215	transferase activity, transferring glycosyl groups
IUJ44_10025	COG1024	Enoyl-CoA hydratase
IUJ44_10040	COG1414	Transcriptional regulator
IUJ44_10060	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_10075	COG2271	Major facilitator Superfamily
IUJ44_10085	COG2267	carboxylic ester hydrolase activity
IUJ44_10090	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_10105	COG0028	Belongs to the TPP enzyme family
IUJ44_10115	COG0477	Major facilitator Superfamily
IUJ44_10120	COG0242	peptide deformylase activity
IUJ44_10125	COG2066	Belongs to the glutaminase family
IUJ44_10130	COG2207	Transcriptional regulator
IUJ44_10135	COG2223	nitrite transmembrane transporter activity
IUJ44_10150	COG0583	DNA-binding transcription factor activity
IUJ44_10155	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_10160	COG2271	Major facilitator Superfamily
IUJ44_10165	COG3959	Transketolase, thiamine diphosphate binding domain
IUJ44_10170	COG3958	Transketolase
IUJ44_10180	COG0306	phosphate transporter
IUJ44_10200	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IUJ44_10245	COG4181	ATPase activity
IUJ44_10250	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
IUJ44_10280	COG0583	DNA-binding transcription factor activity
IUJ44_10290	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IUJ44_10295	COG1773	rubredoxin
IUJ44_10345	COG2851	Citrate transporter
IUJ44_10350	COG1253	flavin adenine dinucleotide binding
IUJ44_10390	COG0804	urea catabolic process
IUJ44_10400	COG0830	nickel cation binding
IUJ44_10415	COG0742	ribosomal rna small subunit methyltransferase
IUJ44_10420	COG0768	penicillin binding
IUJ44_10445	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IUJ44_10450	COG2878	Part of a membrane complex involved in electron transport
IUJ44_10455	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
IUJ44_10465	COG3384	dioxygenase
IUJ44_10490	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IUJ44_10815	COG0739	heme binding
IUJ44_10860	COG2194	sulfuric ester hydrolase activity
IUJ44_10900	COG0006	proline dipeptidase activity
IUJ44_10905	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUJ44_10910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUJ44_10930	COG1279	arginine transmembrane transporter activity
IUJ44_10935	COG0583	DNA-binding transcription factor activity
IUJ44_10975	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IUJ44_10980	COG0741	lytic transglycosylase activity
IUJ44_10980	COG1388	LysM domain
IUJ44_10980	COG0741	lytic transglycosylase activity
IUJ44_10980	COG1388	LysM domain
IUJ44_10990	COG4174	ABC transporter (Permease)
IUJ44_10995	COG4239	(ABC) transporter, permease
IUJ44_11000	COG4172	Belongs to the ABC transporter superfamily
IUJ44_11020	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IUJ44_11030	COG5001	Diguanylate cyclase
IUJ44_11030	COG2203	Gaf domain
IUJ44_11030	COG3706	GGDEF domain
IUJ44_11030	COG4251	negative regulation of phosphorylation
IUJ44_11040	COG0446	pyridine nucleotide-disulphide oxidoreductase
IUJ44_11040	COG1902	pentaerythritol trinitrate reductase activity
IUJ44_11050	COG0582	viral genome integration into host DNA
IUJ44_11125	COG0789	Transcriptional regulator
IUJ44_11185	COG2184	nucleotidyltransferase activity
IUJ44_11195	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IUJ44_11220	COG1309	transcriptional regulator
IUJ44_11235	COG4269	membrane
IUJ44_11275	COG1113	amino acid transport
IUJ44_11285	COG0531	amino acid
IUJ44_11305	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_11325	COG1113	amino acid transport
IUJ44_11360	COG0697	spore germination
IUJ44_11365	COG2721	sulfolactate sulfo-lyase activity
IUJ44_11370	COG2271	Major facilitator Superfamily
IUJ44_11375	COG4948	Mandelate Racemase Muconate Lactonizing
IUJ44_11385	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_11390	COG2186	Transcriptional regulator
IUJ44_11415	COG1960	acyl-CoA dehydrogenase activity
IUJ44_11425	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_11430	COG1024	Enoyl-CoA hydratase
IUJ44_11435	COG2814	Major facilitator Superfamily
IUJ44_11450	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IUJ44_11495	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
IUJ44_11500	COG2072	flavoprotein involved in K transport
IUJ44_11505	COG0300	oxidoreductase activity
IUJ44_11515	COG1309	transcriptional regulator
IUJ44_11520	COG1741	Belongs to the pirin family
IUJ44_11535	COG2072	flavoprotein involved in K transport
IUJ44_11545	COG2252	PERMEase
IUJ44_11550	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IUJ44_11555	COG3038	cytochrome b561
IUJ44_11565	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IUJ44_11575	COG0527	aspartate kinase activity
IUJ44_11630	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IUJ44_11635	COG4197	protein conserved in bacteria, prophage-related
IUJ44_11715	COG5410	chromosome segregation
IUJ44_11720	COG3567	Phage-associated protein, HI1409 family
IUJ44_11740	COG3566	protein conserved in bacteria
IUJ44_11865	COG0582	viral genome integration into host DNA
IUJ44_11875	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IUJ44_11885	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IUJ44_11900	COG0667	Aldo Keto reductase
IUJ44_11915	COG1765	OsmC-like protein
IUJ44_11930	COG0542	response to heat
IUJ44_11965	COG2885	chlorophyll binding
IUJ44_11975	COG0625	glutathione transferase activity
IUJ44_11995	COG0220	tRNA (guanine-N7-)-methyltransferase activity
IUJ44_12015	COG3634	alkyl hydroperoxide reductase activity
IUJ44_12025	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IUJ44_12035	COG0450	alkyl hydroperoxide reductase
IUJ44_12040	COG1643	Atp-dependent helicase
IUJ44_12055	COG2814	Major facilitator Superfamily
IUJ44_12060	COG3135	benzoate transporter
IUJ44_12065	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_12070	COG0543	2 iron, 2 sulfur cluster binding
IUJ44_12070	COG0633	Ferredoxin
IUJ44_12075	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
IUJ44_12080	COG4638	Rieske (2fe-2S)
IUJ44_12085	COG0583	DNA-binding transcription factor activity
IUJ44_12135	COG1570	exodeoxyribonuclease VII activity
IUJ44_12165	COG1280	lysine exporter protein (LysE YggA)
IUJ44_12170	COG1278	Cold shock
IUJ44_12205	COG2814	Major facilitator Superfamily
IUJ44_12285	COG0210	DNA helicase
IUJ44_12295	COG5377	YqaJ viral recombinase family
IUJ44_12500	COG0517	IMP dehydrogenase activity
IUJ44_12500	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
IUJ44_12505	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IUJ44_12515	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
IUJ44_12520	COG1137	ATPase activity
IUJ44_12595	COG4122	O-methyltransferase activity
IUJ44_12605	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
IUJ44_12620	COG1522	sequence-specific DNA binding
IUJ44_12635	COG1560	Kdo2-lipid A biosynthetic process
IUJ44_12645	COG2814	Major facilitator Superfamily
IUJ44_12665	COG1250	3-hydroxyacyl-CoA dehydrogenase
IUJ44_12700	COG0583	DNA-binding transcription factor activity
IUJ44_12705	COG1914	H( )-stimulated, divalent metal cation uptake system
IUJ44_12725	COG4770	biotin carboxylase activity
IUJ44_12730	COG0038	chloride channel
IUJ44_12735	COG2831	hemolysin activation secretion protein
IUJ44_12740	COG3210	domain, Protein
IUJ44_12755	COG1309	transcriptional regulator
IUJ44_12765	COG1063	alcohol dehydrogenase
IUJ44_12780	COG0439	Biotin carboxylase
IUJ44_12785	COG2249	NAD(P)H dehydrogenase (quinone) activity
IUJ44_12790	COG1733	regulation of RNA biosynthetic process
IUJ44_12805	COG0864	Transcriptional regulator
IUJ44_12815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IUJ44_12820	COG1116	anion transmembrane transporter activity
IUJ44_12935	COG0590	tRNA wobble adenosine to inosine editing
IUJ44_12940	COG2807	transmembrane transport
IUJ44_12955	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IUJ44_12975	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IUJ44_13020	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_13025	COG0531	amino acid
IUJ44_13030	COG1760	l-serine dehydratase
IUJ44_13035	COG2030	dehydratase
IUJ44_13035	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_13040	COG3396	Phenylacetate-CoA oxygenase
IUJ44_13045	COG3460	Phenylacetate-CoA oxygenase
IUJ44_13050	COG3396	Phenylacetate-CoA oxygenase
IUJ44_13055	COG2151	metal-sulfur cluster biosynthetic enzyme
IUJ44_13060	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IUJ44_13065	COG1024	Enoyl-CoA hydratase
IUJ44_13070	COG1024	Enoyl-CoA hydratase
IUJ44_13075	COG1250	3-hydroxyacyl-CoA dehydrogenase
IUJ44_13080	COG0183	Belongs to the thiolase family
IUJ44_13085	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
IUJ44_13090	COG3327	negative regulation of DNA-templated transcription, initiation
IUJ44_13100	COG2050	protein possibly involved in aromatic compounds catabolism
IUJ44_13140	COG2207	Transcriptional regulator
IUJ44_13155	COG1804	L-carnitine dehydratase bile acid-inducible protein F
IUJ44_13160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IUJ44_13165	COG2271	Major facilitator Superfamily
IUJ44_13170	COG0753	catalase activity
IUJ44_13175	COG3038	cytochrome b561
IUJ44_13195	COG2267	carboxylic ester hydrolase activity
IUJ44_13200	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IUJ44_13205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IUJ44_13210	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_13220	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
IUJ44_13230	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_13235	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IUJ44_13240	COG0583	DNA-binding transcription factor activity
IUJ44_13250	COG1414	Transcriptional regulator
IUJ44_13255	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUJ44_13265	COG1840	ABC-type Fe3 transport system, periplasmic component
IUJ44_13270	COG3842	ATPase activity
IUJ44_13285	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IUJ44_13290	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IUJ44_13295	COG2814	Major facilitator Superfamily
IUJ44_13300	COG1960	acyl-CoA dehydrogenase activity
IUJ44_13315	COG1024	Enoyl-CoA hydratase
IUJ44_13325	COG2814	Major facilitator Superfamily
IUJ44_13335	COG0183	Belongs to the thiolase family
IUJ44_13340	COG1250	3-hydroxyacyl-CoA dehydrogenase
IUJ44_13345	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_13350	COG1024	Enoyl-CoA hydratase
IUJ44_13355	COG1960	acyl-CoA dehydrogenase activity
IUJ44_13360	COG2814	Major facilitator Superfamily
IUJ44_13365	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IUJ44_13370	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
IUJ44_13380	COG2814	Major facilitator Superfamily
IUJ44_13390	COG1960	acyl-CoA dehydrogenase activity
IUJ44_13405	COG0583	DNA-binding transcription factor activity
IUJ44_13415	COG4770	biotin carboxylase activity
IUJ44_13420	COG1024	Enoyl-CoA hydratase
IUJ44_13425	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
IUJ44_13430	COG1960	acyl-CoA dehydrogenase activity
IUJ44_13435	COG1309	transcriptional regulator
IUJ44_13440	COG0318	PFAM AMP-dependent synthetase and ligase
IUJ44_13460	COG0583	DNA-binding transcription factor activity
IUJ44_13510	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_13530	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IUJ44_13550	COG0784	Response regulator, receiver
IUJ44_13550	COG2205	protein histidine kinase activity
IUJ44_13570	COG0765	amino acid transport
IUJ44_13575	COG0765	amino acid transport
IUJ44_13580	COG1126	abc transporter atp-binding protein
IUJ44_13585	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IUJ44_13590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IUJ44_13605	COG1280	lysine exporter protein (LysE YggA)
IUJ44_13610	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IUJ44_13615	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IUJ44_13620	COG1045	serine acetyltransferase
IUJ44_13635	COG0583	DNA-binding transcription factor activity
IUJ44_13640	COG0625	glutathione transferase activity
IUJ44_13645	COG0625	glutathione transferase activity
IUJ44_13650	COG0583	DNA-binding transcription factor activity
IUJ44_13660	COG1346	cytolysis
IUJ44_13680	COG2814	Major facilitator Superfamily
IUJ44_13690	COG0583	DNA-binding transcription factor activity
IUJ44_13700	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
IUJ44_13705	COG3052	prosthetic group binding
IUJ44_13745	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IUJ44_13755	COG1294	oxidase, subunit
IUJ44_13760	COG1271	oxidase subunit
IUJ44_13780	COG0477	Major facilitator Superfamily
IUJ44_13790	COG4521	taurine ABC transporter
IUJ44_13795	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
IUJ44_13800	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IUJ44_13805	COG2175	clavaminate synthase activity
IUJ44_13815	COG1953	Uracil, thiamine, allantoin
IUJ44_13825	COG0583	DNA-binding transcription factor activity
IUJ44_13835	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
IUJ44_13850	COG0640	Transcriptional regulator
IUJ44_13855	COG0798	PFAM Bile acid sodium symporter
IUJ44_13860	COG0583	DNA-binding transcription factor activity
IUJ44_13875	COG3634	alkyl hydroperoxide reductase activity
IUJ44_13915	COG0436	Aminotransferase
IUJ44_13925	COG0386	Belongs to the glutathione peroxidase family
IUJ44_13965	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
IUJ44_13990	COG0012	GTP binding
IUJ44_13995	COG2011	ABC-type metal ion transport system permease component
IUJ44_14000	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IUJ44_14010	COG1464	Belongs to the NlpA lipoprotein family
IUJ44_14040	COG0765	amino acid transport
IUJ44_14045	COG0765	amino acid transport
IUJ44_14050	COG1126	abc transporter atp-binding protein
IUJ44_14060	COG1522	sequence-specific DNA binding
IUJ44_14075	COG1309	transcriptional regulator
IUJ44_14085	COG1484	DNA-dependent DNA replication
IUJ44_14090	COG4584	PFAM Integrase catalytic
IUJ44_14105	COG1002	Type II restriction enzyme, methylase subunits
IUJ44_14110	COG1061	Type III restriction enzyme res subunit
IUJ44_14120	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IUJ44_14150	COG0583	DNA-binding transcription factor activity
IUJ44_14160	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
IUJ44_14170	COG0697	spore germination
IUJ44_14195	COG3121	Chaperone
IUJ44_14200	COG3539	Fimbrial protein
IUJ44_14225	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IUJ44_14225	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IUJ44_14270	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IUJ44_14280	COG2353	YceI-like domain
IUJ44_14290	COG3698	Phosphodiester glycosidase
IUJ44_14305	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
IUJ44_14310	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
IUJ44_14310	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
IUJ44_14310	COG0506	proline dehydrogenase activity
IUJ44_14320	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IUJ44_14325	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
IUJ44_14345	COG1132	(ABC) transporter
IUJ44_14350	COG3122	Protein conserved in bacteria
IUJ44_14355	COG3619	membrane
IUJ44_14365	COG0640	Transcriptional regulator
IUJ44_14375	COG2850	peptidyl-arginine hydroxylation
IUJ44_14380	COG0424	maF-like protein
IUJ44_14400	COG0191	fructose-bisphosphate aldolase activity
IUJ44_14405	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IUJ44_14420	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
IUJ44_14430	COG1192	Involved in chromosome partitioning
IUJ44_14435	COG1475	DNA binding
IUJ44_14440	COG0811	peptide transport
IUJ44_14450	COG1132	(ABC) transporter
IUJ44_14455	COG1663	tetraacyldisaccharide 4'-kinase activity
IUJ44_14475	COG0084	hydrolase, TatD family'
IUJ44_14540	COG0776	regulation of translation
IUJ44_14570	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IUJ44_14575	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
IUJ44_14625	COG0339	signal peptide processing
IUJ44_14635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IUJ44_14670	COG0702	epimerase
IUJ44_14675	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IUJ44_14695	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IUJ44_14725	COG0316	Belongs to the HesB IscA family
IUJ44_14730	COG0822	iron-sulfur transferase activity
IUJ44_14755	COG0776	regulation of translation
IUJ44_14760	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IUJ44_14765	COG2207	Transcriptional regulator
IUJ44_14770	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IUJ44_14775	COG1960	acyl-CoA dehydrogenase activity
IUJ44_14780	COG1960	acyl-CoA dehydrogenase activity
IUJ44_14795	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IUJ44_14815	COG4264	IucA IucC family
IUJ44_14820	COG4264	IucA IucC family
IUJ44_14830	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IUJ44_14860	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IUJ44_14880	COG0406	alpha-ribazole phosphatase activity
IUJ44_14895	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IUJ44_14900	COG0730	response to heat
IUJ44_14920	COG4773	Receptor
IUJ44_14925	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IUJ44_14940	COG1131	(ABC) transporter
IUJ44_14945	COG0842	Transport permease protein
IUJ44_14950	COG0842	Transport permease protein
IUJ44_15005	COG2226	methyltransferase
IUJ44_15030	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IUJ44_15050	COG3706	GGDEF domain
IUJ44_15065	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
IUJ44_15070	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
IUJ44_15075	COG0022	dehydrogenase e1 component
IUJ44_15080	COG0508	dehydrogenase complex catalyzes the overall conversion of
IUJ44_15085	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IUJ44_15095	COG1063	alcohol dehydrogenase
IUJ44_15100	COG3781	membrane
IUJ44_15110	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IUJ44_15110	COG3453	Protein conserved in bacteria
IUJ44_15120	COG0730	response to heat
IUJ44_15135	COG2207	Transcriptional regulator
IUJ44_15135	COG3708	Transcriptional regulator
IUJ44_15140	COG1733	regulation of RNA biosynthetic process
IUJ44_15145	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IUJ44_15155	COG2188	Transcriptional regulator
IUJ44_15170	COG4521	taurine ABC transporter
IUJ44_15175	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IUJ44_15195	COG0477	Major facilitator Superfamily
IUJ44_15205	COG1027	Aspartate ammonia-lyase
IUJ44_15220	COG0583	DNA-binding transcription factor activity
IUJ44_15225	COG0583	DNA-binding transcription factor activity
IUJ44_15230	COG0183	Belongs to the thiolase family
IUJ44_15235	COG2031	fatty acid transporter
IUJ44_15250	COG0583	DNA-binding transcription factor activity
IUJ44_15270	COG1309	transcriptional regulator
IUJ44_15280	COG2610	gluconate transmembrane transporter activity
IUJ44_15285	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15290	COG2207	Transcriptional regulator
IUJ44_15305	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15315	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IUJ44_15330	COG0543	2 iron, 2 sulfur cluster binding
IUJ44_15330	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IUJ44_15335	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
IUJ44_15340	COG4638	Rieske (2fe-2S)
IUJ44_15350	COG0725	ABC transporter, periplasmic molybdate-binding protein
IUJ44_15355	COG4149	molybdate abc transporter
IUJ44_15360	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
IUJ44_15365	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15370	COG1535	isochorismatase
IUJ44_15370	COG3433	isochorismatase activity
IUJ44_15430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IUJ44_15445	COG0753	catalase activity
IUJ44_15455	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
IUJ44_15495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IUJ44_15500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUJ44_15505	COG0745	RESPONSE REGULATOR receiver
IUJ44_15510	COG2205	protein histidine kinase activity
IUJ44_15520	COG2207	Transcriptional regulator
IUJ44_15535	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15550	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
IUJ44_15600	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
IUJ44_15670	COG1401	restriction endodeoxyribonuclease activity
IUJ44_15715	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IUJ44_15735	COG1120	ATPase activity
IUJ44_15740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IUJ44_15750	COG1064	alcohol dehydrogenase
IUJ44_15765	COG2207	Transcriptional regulator
IUJ44_15770	COG2084	Dehydrogenase
IUJ44_15780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IUJ44_15785	COG0583	DNA-binding transcription factor activity
IUJ44_15795	COG0129	dihydroxy-acid dehydratase activity
IUJ44_15800	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_15815	COG1566	PFAM secretion protein HlyD family protein
IUJ44_15830	COG0583	DNA-binding transcription factor activity
IUJ44_15845	COG2188	Transcriptional regulator
IUJ44_15880	COG3210	domain, Protein
IUJ44_15885	COG2831	hemolysin activation secretion protein
IUJ44_15905	COG0318	PFAM AMP-dependent synthetase and ligase
IUJ44_15915	COG1960	acyl-CoA dehydrogenase activity
IUJ44_15925	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15930	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15935	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_15940	COG0583	DNA-binding transcription factor activity
IUJ44_15945	COG1309	transcriptional regulator
IUJ44_15970	COG0789	Transcriptional regulator
IUJ44_15985	COG0446	pyridine nucleotide-disulphide oxidoreductase
IUJ44_15985	COG1902	pentaerythritol trinitrate reductase activity
IUJ44_16000	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_16020	COG2186	Transcriptional regulator
IUJ44_16030	COG0583	DNA-binding transcription factor activity
IUJ44_16035	COG4948	Mandelate Racemase Muconate Lactonizing
IUJ44_16040	COG4829	muconolactone delta-isomerase
IUJ44_16050	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IUJ44_16055	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
IUJ44_16060	COG0183	Belongs to the thiolase family
IUJ44_16065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IUJ44_16075	COG1012	belongs to the aldehyde dehydrogenase family
IUJ44_16085	COG3733	amine oxidase
IUJ44_16095	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IUJ44_16105	COG1028	Short-chain dehydrogenase reductase Sdr
IUJ44_16115	COG4638	Rieske (2fe-2S)
IUJ44_16135	COG0154	amidase activity
IUJ44_16145	COG2814	Major facilitator Superfamily
IUJ44_16170	COG1960	acyl-CoA dehydrogenase activity
IUJ44_16175	COG0583	DNA-binding transcription factor activity
IUJ44_16180	COG1414	Transcriptional regulator
IUJ44_16195	COG2391	methyltransferase activity
IUJ44_16205	COG4993	Dehydrogenase
IUJ44_16210	COG3659	wide pore channel activity
IUJ44_16215	COG3420	alginic acid biosynthetic process
IUJ44_16220	COG0710	3-dehydroquinate dehydratase activity
IUJ44_16225	COG3485	protocatechuate 3,4-dioxygenase
IUJ44_16230	COG3485	protocatechuate 3,4-dioxygenase
IUJ44_16235	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IUJ44_16240	COG2271	Major facilitator Superfamily
IUJ44_16245	COG0596	Alpha beta hydrolase
IUJ44_16250	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IUJ44_16255	COG0183	Belongs to the thiolase family
IUJ44_16260	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
IUJ44_16265	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
IUJ44_16275	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
IUJ44_16280	COG2323	membrane
IUJ44_16325	COG1902	pentaerythritol trinitrate reductase activity
IUJ44_16325	COG0446	pyridine nucleotide-disulphide oxidoreductase
IUJ44_16350	COG0542	response to heat
IUJ44_16355	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
IUJ44_16385	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IUJ44_16390	COG0569	domain protein
IUJ44_16395	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IUJ44_16410	COG4774	siderophore transport
IUJ44_16415	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IUJ44_16425	COG1585	Membrane protein implicated in regulation of membrane protease activity
IUJ44_16440	COG1294	oxidase, subunit
IUJ44_16445	COG4890	Cyd operon protein YbgT
IUJ44_16455	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
IUJ44_16465	COG0552	protein localization to endoplasmic reticulum
IUJ44_16490	COG0517	IMP dehydrogenase activity
IUJ44_16490	COG0516	GMP reductase activity
IUJ44_16495	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IUJ44_16500	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IUJ44_16510	COG0583	DNA-binding transcription factor activity
IUJ44_16515	COG0024	Methionine aminopeptidase
IUJ44_16545	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IUJ44_16545	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IUJ44_16550	COG1105	Belongs to the carbohydrate kinase PfkB family
IUJ44_16555	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IUJ44_16555	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IUJ44_16555	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
IUJ44_16575	COG3300	MHYT domain
IUJ44_16575	COG5001	Diguanylate cyclase
IUJ44_16590	COG2135	peptidase activity
IUJ44_16595	COG0659	secondary active sulfate transmembrane transporter activity
IUJ44_16610	COG1113	amino acid transport
IUJ44_16620	COG1522	sequence-specific DNA binding
IUJ44_16645	COG1011	Hydrolase
IUJ44_16650	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IUJ44_16660	COG2137	regulation of response to DNA damage stimulus
IUJ44_16675	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IUJ44_16710	COG0575	Belongs to the CDS family
IUJ44_16715	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IUJ44_16740	COG3852	Histidine kinase
IUJ44_16745	COG2204	response regulator
IUJ44_16800	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IUJ44_16805	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
IUJ44_16825	COG0697	spore germination
IUJ44_16830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IUJ44_16840	COG0303	'Molybdopterin
IUJ44_16845	COG0521	Mo-molybdopterin cofactor biosynthetic process
IUJ44_16845	COG0315	cyclic pyranopterin monophosphate synthase activity
IUJ44_16860	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IUJ44_16875	COG0243	molybdopterin cofactor binding
IUJ44_16880	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IUJ44_16885	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IUJ44_16885	COG2146	nitrite reductase [NAD(P)H] activity
IUJ44_16895	COG0745	RESPONSE REGULATOR receiver
IUJ44_16900	COG1116	anion transmembrane transporter activity
IUJ44_16900	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IUJ44_16920	COG0511	ligase activity, forming carbon-carbon bonds
IUJ44_16935	COG2814	Major facilitator Superfamily
IUJ44_16955	COG0069	glutamate synthase activity
IUJ44_16975	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IUJ44_16985	COG1454	alcohol dehydrogenase
IUJ44_16990	COG0824	Thioesterase
IUJ44_17005	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IUJ44_17025	COG2030	dehydratase
IUJ44_17035	COG0183	Belongs to the thiolase family
IUJ44_17045	COG0583	DNA-binding transcription factor activity
IUJ44_17050	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IUJ44_17060	COG1522	sequence-specific DNA binding
IUJ44_17065	COG3135	benzoate transporter
IUJ44_17075	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
IUJ44_17100	COG0589	response to stress
IUJ44_17105	COG0488	(ABC) transporter
IUJ44_17125	COG4773	Receptor
IUJ44_17155	COG0668	transmembrane transport
IUJ44_17165	COG1309	transcriptional regulator
IUJ44_17180	COG1605	Chorismate mutase
IUJ44_17220	COG0308	aminopeptidase N
IUJ44_17245	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IUJ44_17250	COG1454	alcohol dehydrogenase
IUJ44_17270	COG0531	amino acid
IUJ44_17275	COG4303	Ethanolamine ammonia lyase large subunit
IUJ44_17280	COG4302	ethanolamine ammonia-lyase activity
IUJ44_17285	COG0519	Catalyzes the synthesis of GMP from XMP
IUJ44_17285	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IUJ44_17290	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IUJ44_17300	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IUJ44_17315	COG0697	spore germination
IUJ44_17320	COG1923	regulation of RNA biosynthetic process
IUJ44_17330	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IUJ44_17335	COG0802	atpase or kinase
IUJ44_17355	COG1187	pseudouridine synthase activity
IUJ44_17370	COG0583	DNA-binding transcription factor activity
IUJ44_17385	COG2814	Major facilitator Superfamily
IUJ44_17390	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IUJ44_17415	COG0729	surface antigen
IUJ44_17435	COG0174	glutamine synthetase
IUJ44_17440	COG0745	RESPONSE REGULATOR receiver
IUJ44_17445	COG2205	protein histidine kinase activity
IUJ44_17455	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
IUJ44_17460	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
IUJ44_17485	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IUJ44_17490	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IUJ44_17525	COG0583	DNA-binding transcription factor activity
IUJ44_17540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IUJ44_17550	COG3658	cytochrome
IUJ44_17555	COG1215	transferase activity, transferring glycosyl groups
IUJ44_17560	COG1649	PFAM Uncharacterised BCR, COG1649
IUJ44_17560	COG0726	polysaccharide deacetylase
IUJ44_17585	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IUJ44_17590	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IUJ44_17600	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IUJ44_17625	COG0305	Participates in initiation and elongation during chromosome replication
IUJ44_17630	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IUJ44_17640	COG1305	Transglutaminase-like
IUJ44_17650	COG2308	Evidence 4 Homologs of previously reported genes of
IUJ44_17680	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
IUJ44_17685	COG0138	bifunctional purine biosynthesis protein purh
IUJ44_17690	COG0151	Belongs to the GarS family
IUJ44_17695	COG1464	Belongs to the NlpA lipoprotein family
IUJ44_17700	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IUJ44_17705	COG2011	ABC-type metal ion transport system permease component
IUJ44_17710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IUJ44_17720	COG1301	dicarboxylic acid transport
IUJ44_17750	COG1794	racemase activity, acting on amino acids and derivatives
IUJ44_17770	COG0745	RESPONSE REGULATOR receiver
IUJ44_17775	COG0642	Histidine kinase
IUJ44_17780	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IUJ44_17790	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IUJ44_17830	COG2351	hydroxyisourate hydrolase activity
IUJ44_17840	COG3008	intermembrane lipid transfer
IUJ44_17840	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IUJ44_17845	COG2995	paraquat-inducible protein a
IUJ44_17875	COG1051	belongs to the nudix hydrolase family
IUJ44_17880	COG0477	Major facilitator Superfamily
IUJ44_17935	COG2186	Transcriptional regulator
IUJ44_17945	COG0786	glutamate:sodium symporter activity
IUJ44_17950	COG3243	poly(R)-hydroxyalkanoic acid synthase
IUJ44_17975	COG3111	PFAM Bacterial OB fold (BOF) protein
IUJ44_18075	COG1610	YqeY-like protein
IUJ44_18080	COG4783	chaperone-mediated protein folding
IUJ44_18105	COG1286	toxin biosynthetic process
IUJ44_18135	COG0778	Nitroreductase
IUJ44_18145	COG0513	Belongs to the DEAD box helicase family
IUJ44_18165	COG2363	Small membrane protein
IUJ44_18195	COG1234	tRNA 3'-trailer cleavage
IUJ44_18200	COG2195	Cleaves the N-terminal amino acid of tripeptides
IUJ44_18210	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
IUJ44_18220	COG2819	hydrolase of the alpha beta superfamily
IUJ44_18225	COG1960	acyl-CoA dehydrogenase activity
IUJ44_18230	COG1301	dicarboxylic acid transport
IUJ44_18235	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IUJ44_18240	COG3139	Protein of unknown function (DUF1315)
IUJ44_18245	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IUJ44_18250	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IUJ44_18260	COG0494	nUDIX hydrolase
IUJ44_18270	COG0642	Histidine kinase
IUJ44_18280	COG3111	PFAM Bacterial OB fold (BOF) protein
IUJ44_18285	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IUJ44_18295	COG1720	tRNA m6t6A37 methyltransferase activity
IUJ44_18310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IUJ44_18315	COG0826	peptidase U32
IUJ44_18320	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IUJ44_18330	COG4598	ABC transporter
IUJ44_18335	COG4160	amino acid transport
IUJ44_18340	COG4215	(ABC) transporter
IUJ44_18355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUJ44_18725	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IUJ44_18755	COG3617	BRO family, N-terminal domain
IUJ44_18760	COG0582	viral genome integration into host DNA
IUJ44_18765	COG1131	(ABC) transporter
IUJ44_18770	COG0842	Transport permease protein
IUJ44_18785	COG0772	Belongs to the SEDS family
IUJ44_18790	COG2951	lytic endotransglycosylase activity
IUJ44_18815	COG2207	Transcriptional regulator
IUJ44_18830	COG0052	Belongs to the universal ribosomal protein uS2 family
IUJ44_18835	COG0024	Methionine aminopeptidase
IUJ44_18845	COG2223	nitrite transmembrane transporter activity
IUJ44_18855	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IUJ44_18860	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
IUJ44_18865	COG1960	acyl-CoA dehydrogenase activity
IUJ44_18880	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
IUJ44_18885	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
IUJ44_18890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IUJ44_18910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IUJ44_18915	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IUJ44_18920	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IUJ44_18955	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
IUJ44_18965	COG0174	glutamine synthetase
IUJ44_18980	COG0512	Glutamine amidotransferase of anthranilate synthase
IUJ44_18985	COG0308	aminopeptidase N