locus-tag class description KSA16_000005 PF00308 Bacterial dnaA protein KSA16_000005 PF08299 Bacterial dnaA protein helix-turn-helix KSA16_000005 PF11638 DnaA N-terminal domain KSA16_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain KSA16_000010 PF02767 DNA polymerase III beta subunit, central domain KSA16_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain KSA16_000015 PF02463 RecF/RecN/SMC N terminal domain KSA16_000020 PF00204 DNA gyrase B KSA16_000020 PF00986 DNA gyrase B subunit, carboxyl terminus KSA16_000020 PF18053 DNA gyrase B subunit insert domain KSA16_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_000020 PF01751 Toprim domain KSA16_000030 PF09335 SNARE associated Golgi protein KSA16_000035 PF12848 ABC transporter KSA16_000035 PF00005 ABC transporter KSA16_000055 PF01521 Iron-sulphur cluster biosynthesis KSA16_000060 PF00561 alpha/beta hydrolase fold KSA16_000065 PF03702 Anhydro-N-acetylmuramic acid kinase KSA16_000070 PF00579 tRNA synthetases class I (W and Y) KSA16_000115 PF00209 Sodium:neurotransmitter symporter family KSA16_000125 PF01189 16S rRNA methyltransferase RsmB/F KSA16_000125 PF01029 NusB family KSA16_000130 PF02911 Formyl transferase, C-terminal domain KSA16_000130 PF00551 Formyl transferase KSA16_000135 PF00920 Dehydratase family KSA16_000150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_000150 PF03466 LysR substrate binding domain KSA16_000155 PF00860 Permease family KSA16_000160 PF00311 Phosphoenolpyruvate carboxylase KSA16_000165 PF00440 Bacterial regulatory proteins, tetR family KSA16_000165 PF08361 MAATS-type transcriptional repressor, C-terminal region KSA16_000170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_000175 PF00873 AcrB/AcrD/AcrF family KSA16_000185 PF00226 DnaJ domain KSA16_000185 PF01556 DnaJ C terminal domain KSA16_000185 PF00684 DnaJ central domain KSA16_000195 PF05173 Dihydrodipicolinate reductase, C-terminus KSA16_000195 PF01113 Dihydrodipicolinate reductase, N-terminus KSA16_000205 PF07690 Major Facilitator Superfamily KSA16_000210 PF00248 Aldo/keto reductase family KSA16_000215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_000215 PF03466 LysR substrate binding domain KSA16_000230 PF00155 Aminotransferase class I and II KSA16_000230 PF00392 Bacterial regulatory proteins, gntR family KSA16_000235 PF00107 Zinc-binding dehydrogenase KSA16_000235 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_000240 PF03352 Methyladenine glycosylase KSA16_000255 PF00633 Helix-hairpin-helix motif KSA16_000255 PF00730 HhH-GPD superfamily base excision DNA repair protein KSA16_000255 PF14815 NUDIX domain KSA16_000255 PF10576 Iron-sulfur binding domain of endonuclease III KSA16_000270 PF07043 Protein of unknown function (DUF1328) KSA16_000275 PF03692 Putative zinc- or iron-chelating domain KSA16_000280 PF07995 Glucose / Sorbosone dehydrogenase KSA16_000285 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_000285 PF16193 AAA C-terminal domain KSA16_000285 PF12002 MgsA AAA+ ATPase C terminal KSA16_000290 PF01226 Formate/nitrite transporter KSA16_000300 PF01259 SAICAR synthetase KSA16_000310 PF00701 Dihydrodipicolinate synthetase family KSA16_000315 PF00857 Isochorismatase family KSA16_000320 PF01758 Sodium Bile acid symporter family KSA16_000325 PF01554 MatE KSA16_000330 PF04463 Protein of unknown function (DUF523) KSA16_000335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSA16_000345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSA16_000350 PF02798 Glutathione S-transferase, N-terminal domain KSA16_000350 PF14497 Glutathione S-transferase, C-terminal domain KSA16_000360 PF00324 Amino acid permease KSA16_000370 PF07683 Cobalamin synthesis protein cobW C-terminal domain KSA16_000370 PF02492 CobW/HypB/UreG, nucleotide-binding domain KSA16_000380 PF07702 UTRA domain KSA16_000380 PF00392 Bacterial regulatory proteins, gntR family KSA16_000385 PF05962 HutD KSA16_000390 PF17392 Urocanase C-terminal domain KSA16_000390 PF01175 Urocanase Rossmann-like domain KSA16_000390 PF17391 Urocanase N-terminal domain KSA16_000395 PF00221 Aromatic amino acid lyase KSA16_000400 PF00324 Amino acid permease KSA16_000405 PF01979 Amidohydrolase family KSA16_000410 PF00491 Arginase family KSA16_000425 PF01177 Asp/Glu/Hydantoin racemase KSA16_000430 PF01380 SIS domain KSA16_000435 PF14602 Hexapeptide repeat of succinyl-transferase KSA16_000435 PF12804 MobA-like NTP transferase domain KSA16_000435 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_000440 PF04608 Phosphatidylglycerophosphatase A KSA16_000445 PF00586 AIR synthase related protein, N-terminal domain KSA16_000445 PF02769 AIR synthase related protein, C-terminal domain KSA16_000450 PF01029 NusB family KSA16_000455 PF00885 6,7-dimethyl-8-ribityllumazine synthase KSA16_000460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KSA16_000460 PF00925 GTP cyclohydrolase II KSA16_000485 PF02580 D-Tyr-tRNA(Tyr) deacylase KSA16_000490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KSA16_000490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KSA16_000495 PF00581 Rhodanese-like domain KSA16_000500 PF02666 Phosphatidylserine decarboxylase KSA16_000505 PF03069 Acetamidase/Formamidase family KSA16_000525 PF11808 Phosphate regulon sensor protein PhoR KSA16_000525 PF00989 PAS fold KSA16_000525 PF00512 His Kinase A (phospho-acceptor) domain KSA16_000525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_000530 PF00486 Transcriptional regulatory protein, C terminal KSA16_000530 PF00072 Response regulator receiver domain KSA16_000540 PF00106 short chain dehydrogenase KSA16_000545 PF01554 MatE KSA16_000550 PF00155 Aminotransferase class I and II KSA16_000555 PF04286 Protein of unknown function (DUF445) KSA16_000570 PF04262 Glutamate-cysteine ligase KSA16_000575 PF02600 Disulfide bond formation protein DsbB KSA16_000580 PF04717 Type VI secretion system, phage-baseplate injector KSA16_000580 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KSA16_000580 PF13296 Putative type VI secretion system Rhs element Vgr KSA16_000585 PF00877 NlpC/P60 family KSA16_000585 PF01476 LysM domain KSA16_000600 PF05728 Uncharacterised protein family (UPF0227) KSA16_000605 PF00204 DNA gyrase B KSA16_000605 PF01751 Toprim domain KSA16_000605 PF00986 DNA gyrase B subunit, carboxyl terminus KSA16_000605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_000610 PF00106 short chain dehydrogenase KSA16_000615 PF04115 Ureidoglycolate lyase KSA16_000620 PF03561 Allantoicase repeat KSA16_000625 PF01494 FAD binding domain KSA16_000635 PF00860 Permease family KSA16_000640 PF00576 HIUase/Transthyretin family KSA16_000670 PF02683 Cytochrome C biogenesis protein transmembrane region KSA16_000670 PF11412 Disulphide bond corrector protein DsbC KSA16_000675 PF07694 5TMR of 5TMR-LYT KSA16_000675 PF00990 Diguanylate cyclase, GGDEF domain KSA16_000680 PF07859 alpha/beta hydrolase fold KSA16_000690 PF03960 ArsC family KSA16_000695 PF03372 Endonuclease/Exonuclease/phosphatase family KSA16_000700 PF00156 Phosphoribosyl transferase domain KSA16_000705 PF00593 TonB dependent receptor KSA16_000705 PF07715 TonB-dependent Receptor Plug Domain KSA16_000715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KSA16_000715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KSA16_000720 PF03033 Glycosyltransferase family 28 N-terminal domain KSA16_000720 PF04101 Glycosyltransferase family 28 C-terminal domain KSA16_000725 PF08245 Mur ligase middle domain KSA16_000725 PF02875 Mur ligase family, glutamate ligase domain KSA16_000725 PF01225 Mur ligase family, catalytic domain KSA16_000730 PF01820 D-ala D-ala ligase N-terminus KSA16_000730 PF07478 D-ala D-ala ligase C-terminus KSA16_000735 PF08478 POTRA domain, FtsQ-type KSA16_000735 PF03799 Cell division protein FtsQ KSA16_000740 PF02491 SHS2 domain inserted in FTSA KSA16_000745 PF00091 Tubulin/FtsZ family, GTPase domain KSA16_000745 PF12327 FtsZ family, C-terminal domain KSA16_000750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KSA16_000760 PF01551 Peptidase family M23 KSA16_000765 PF00456 Transketolase, thiamine diphosphate binding domain KSA16_000765 PF17831 Pyruvate dehydrogenase E1 component middle domain KSA16_000770 PF02817 e3 binding domain KSA16_000770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSA16_000770 PF00364 Biotin-requiring enzyme KSA16_000780 PF01169 Uncharacterized protein family UPF0016 KSA16_000785 PF00593 TonB dependent receptor KSA16_000785 PF07715 TonB-dependent Receptor Plug Domain KSA16_000790 PF00258 Flavodoxin KSA16_000790 PF01613 Flavin reductase like domain KSA16_000795 PF03692 Putative zinc- or iron-chelating domain KSA16_000800 PF00478 IMP dehydrogenase / GMP reductase domain KSA16_000800 PF00571 CBS domain KSA16_000805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSA16_000805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSA16_000805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSA16_000805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSA16_000810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KSA16_000810 PF01243 Pyridoxamine 5'-phosphate oxidase KSA16_000815 PF17768 RecJ OB domain KSA16_000815 PF02272 DHHA1 domain KSA16_000815 PF01368 DHH family KSA16_000835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_000840 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KSA16_000845 PF04452 RNA methyltransferase KSA16_000850 PF00924 Mechanosensitive ion channel KSA16_000860 PF13193 AMP-binding enzyme C-terminal domain KSA16_000860 PF00501 AMP-binding enzyme KSA16_000860 PF16177 Acetyl-coenzyme A synthetase N-terminus KSA16_000865 PF00857 Isochorismatase family KSA16_000870 PF01037 Lrp/AsnC ligand binding domain KSA16_000875 PF00872 Transposase, Mutator family KSA16_000880 PF00296 Luciferase-like monooxygenase KSA16_000885 PF03358 NADPH-dependent FMN reductase KSA16_000890 PF00196 Bacterial regulatory proteins, luxR family KSA16_000890 PF00072 Response regulator receiver domain KSA16_000900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_000900 PF00672 HAMP domain KSA16_000900 PF01627 Hpt domain KSA16_000900 PF00072 Response regulator receiver domain KSA16_000900 PF00512 His Kinase A (phospho-acceptor) domain KSA16_000905 PF04341 Protein of unknown function, DUF485 KSA16_000910 PF00474 Sodium:solute symporter family KSA16_000920 PF02028 BCCT, betaine/carnitine/choline family transporter KSA16_000930 PF00990 Diguanylate cyclase, GGDEF domain KSA16_000940 PF17755 UvrA DNA-binding domain KSA16_000940 PF17760 UvrA interaction domain KSA16_000940 PF00005 ABC transporter KSA16_000945 PF16925 Tetracyclin repressor-like, C-terminal domain KSA16_000945 PF00440 Bacterial regulatory proteins, tetR family KSA16_000950 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_000950 PF00107 Zinc-binding dehydrogenase KSA16_000960 PF06942 GlpM protein KSA16_000965 PF02581 Thiamine monophosphate synthase KSA16_000965 PF03070 TENA/THI-4/PQQC family KSA16_000965 PF08543 Phosphomethylpyrimidine kinase KSA16_000975 PF07690 Major Facilitator Superfamily KSA16_000980 PF00436 Single-strand binding protein family KSA16_000990 PF03591 AzlC protein KSA16_001000 PF00324 Amino acid permease KSA16_001005 PF00392 Bacterial regulatory proteins, gntR family KSA16_001005 PF00155 Aminotransferase class I and II KSA16_001010 PF00202 Aminotransferase class-III KSA16_001015 PF00171 Aldehyde dehydrogenase family KSA16_001020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_001025 PF00857 Isochorismatase family KSA16_001030 PF02678 Pirin KSA16_001030 PF05726 Pirin C-terminal cupin domain KSA16_001035 PF01593 Flavin containing amine oxidoreductase KSA16_001055 PF07690 Major Facilitator Superfamily KSA16_001060 PF03466 LysR substrate binding domain KSA16_001060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_001080 PF00248 Aldo/keto reductase family KSA16_001085 PF02311 AraC-like ligand binding domain KSA16_001085 PF12833 Helix-turn-helix domain KSA16_001115 PF01638 HxlR-like helix-turn-helix KSA16_001120 PF02525 Flavodoxin-like fold KSA16_001140 PF02705 K+ potassium transporter KSA16_001165 PF00230 Major intrinsic protein KSA16_001180 PF00977 Histidine biosynthesis protein KSA16_001185 PF01636 Phosphotransferase enzyme family KSA16_001200 PF03992 Antibiotic biosynthesis monooxygenase KSA16_001215 PF00977 Histidine biosynthesis protein KSA16_001230 PF00117 Glutamine amidotransferase class-I KSA16_001235 PF00475 Imidazoleglycerol-phosphate dehydratase KSA16_001255 PF00583 Acetyltransferase (GNAT) family KSA16_001260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KSA16_001260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KSA16_001270 PF00512 His Kinase A (phospho-acceptor) domain KSA16_001270 PF00672 HAMP domain KSA16_001270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_001275 PF00072 Response regulator receiver domain KSA16_001275 PF00486 Transcriptional regulatory protein, C terminal KSA16_001280 PF16921 Tex protein YqgF-like domain KSA16_001280 PF17674 HHH domain KSA16_001280 PF00575 S1 RNA binding domain KSA16_001280 PF09371 Tex-like protein N-terminal domain KSA16_001285 PF00916 Sulfate permease family KSA16_001285 PF01740 STAS domain KSA16_001290 PF00106 short chain dehydrogenase KSA16_001295 PF01053 Cys/Met metabolism PLP-dependent enzyme KSA16_001300 PF00005 ABC transporter KSA16_001300 PF12848 ABC transporter KSA16_001325 PF04191 Phospholipid methyltransferase KSA16_001345 PF00529 HlyD membrane-fusion protein of T1SS KSA16_001345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_001350 PF00873 AcrB/AcrD/AcrF family KSA16_001355 PF01545 Cation efflux family KSA16_001385 PF00324 Amino acid permease KSA16_001400 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSA16_001415 PF01795 MraW methylase family KSA16_001425 PF00905 Penicillin binding protein transpeptidase domain KSA16_001425 PF03717 Penicillin-binding Protein dimerisation domain KSA16_001430 PF08245 Mur ligase middle domain KSA16_001430 PF02875 Mur ligase family, glutamate ligase domain KSA16_001430 PF01225 Mur ligase family, catalytic domain KSA16_001435 PF08245 Mur ligase middle domain KSA16_001435 PF02875 Mur ligase family, glutamate ligase domain KSA16_001435 PF01225 Mur ligase family, catalytic domain KSA16_001440 PF00953 Glycosyl transferase family 4 KSA16_001450 PF13847 Methyltransferase domain KSA16_001455 PF00912 Transglycosylase KSA16_001455 PF00905 Penicillin binding protein transpeptidase domain KSA16_001455 PF17092 Penicillin-binding protein OB-like domain KSA16_001460 PF11104 Type IV pilus assembly protein PilM; KSA16_001465 PF05137 Fimbrial assembly protein (PilN) KSA16_001470 PF04350 Pilus assembly protein, PilO KSA16_001480 PF00263 Bacterial type II and III secretion system protein KSA16_001480 PF11741 AMIN domain KSA16_001480 PF07660 Secretin and TonB N terminus short domain KSA16_001480 PF03958 Bacterial type II/III secretion system short domain KSA16_001485 PF01202 Shikimate kinase KSA16_001490 PF01761 3-dehydroquinate synthase KSA16_001500 PF00310 Glutamine amidotransferases class-II KSA16_001500 PF04898 Glutamate synthase central domain KSA16_001500 PF01645 Conserved region in glutamate synthase KSA16_001500 PF01493 GXGXG motif KSA16_001505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_001505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KSA16_001515 PF04011 LemA family KSA16_001520 PF04536 TPM domain KSA16_001530 PF07963 Prokaryotic N-terminal methylation motif KSA16_001530 PF00114 Pilin (bacterial filament) KSA16_001540 PF15864 Protein glycosylation ligase KSA16_001540 PF11846 Virulence factor membrane-bound polymerase, C-terminal KSA16_001540 PF04932 O-Antigen ligase KSA16_001545 PF00210 Ferritin-like domain KSA16_001550 PF04324 BFD-like [2Fe-2S] binding domain KSA16_001555 PF01042 Endoribonuclease L-PSP KSA16_001560 PF02824 TGS domain KSA16_001560 PF04607 Region found in RelA / SpoT proteins KSA16_001560 PF13291 ACT domain KSA16_001570 PF01192 RNA polymerase Rpb6 KSA16_001575 PF00625 Guanylate kinase KSA16_001580 PF02401 LytB protein KSA16_001620 PF00886 Ribosomal protein S16 KSA16_001625 PF01782 RimM N-terminal domain KSA16_001625 PF05239 PRC-barrel domain KSA16_001630 PF01746 tRNA (Guanine-1)-methyltransferase KSA16_001635 PF01245 Ribosomal protein L19 KSA16_001640 PF00561 alpha/beta hydrolase fold KSA16_001645 PF03280 Proteobacterial lipase chaperone protein KSA16_001650 PF01509 TruB family pseudouridylate synthase (N terminal domain) KSA16_001650 PF16198 tRNA pseudouridylate synthase B C-terminal domain KSA16_001650 PF09157 Pseudouridine synthase II TruB, C-terminal KSA16_001655 PF01925 Sulfite exporter TauE/SafE KSA16_001665 PF00892 EamA-like transporter family KSA16_001670 PF00892 EamA-like transporter family KSA16_001675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSA16_001675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSA16_001680 PF01565 FAD binding domain KSA16_001680 PF02913 FAD linked oxidases, C-terminal domain KSA16_001690 PF03992 Antibiotic biosynthesis monooxygenase KSA16_001695 PF02525 Flavodoxin-like fold KSA16_001705 PF07690 Major Facilitator Superfamily KSA16_001710 PF12805 FUSC-like inner membrane protein yccS KSA16_001715 PF00080 Copper/zinc superoxide dismutase (SODC) KSA16_001720 PF01594 AI-2E family transporter KSA16_001725 PF13614 AAA domain KSA16_001755 PF00324 Amino acid permease KSA16_001760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSA16_001760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KSA16_001765 PF00202 Aminotransferase class-III KSA16_001770 PF04958 Arginine N-succinyltransferase beta subunit KSA16_001775 PF00171 Aldehyde dehydrogenase family KSA16_001780 PF04996 Succinylarginine dihydrolase KSA16_001785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KSA16_001800 PF05922 Peptidase inhibitor I9 KSA16_001800 PF00082 Subtilase family KSA16_001815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_001815 PF03466 LysR substrate binding domain KSA16_001820 PF00892 EamA-like transporter family KSA16_001830 PF05746 DALR anticodon binding domain KSA16_001830 PF02092 Glycyl-tRNA synthetase beta subunit KSA16_001835 PF02091 Glycyl-tRNA synthetase alpha subunit KSA16_001860 PF00571 CBS domain KSA16_001865 PF04024 PspC domain KSA16_001875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_001875 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_001875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_001875 PF12806 Acetyl-CoA dehydrogenase C-terminal like KSA16_001885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KSA16_001885 PF01488 Shikimate / quinate 5-dehydrogenase KSA16_001885 PF08501 Shikimate dehydrogenase substrate binding domain KSA16_001890 PF01218 Coproporphyrinogen III oxidase KSA16_001895 PF00925 GTP cyclohydrolase II KSA16_001900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KSA16_001900 PF02779 Transketolase, pyrimidine binding domain KSA16_001900 PF02780 Transketolase, C-terminal domain KSA16_001905 PF00459 Inositol monophosphatase family KSA16_001910 PF03880 DbpA RNA binding domain KSA16_001910 PF00270 DEAD/DEAH box helicase KSA16_001910 PF12343 Cold shock protein DEAD box A KSA16_001910 PF00271 Helicase conserved C-terminal domain KSA16_001920 PF00005 ABC transporter KSA16_001925 PF02405 Permease MlaE KSA16_001935 PF05494 MlaC protein KSA16_001945 PF01544 CorA-like Mg2+ transporter protein KSA16_001950 PF03641 Possible lysine decarboxylase KSA16_001955 PF00293 NUDIX domain KSA16_001960 PF00156 Phosphoribosyl transferase domain KSA16_001965 PF00270 DEAD/DEAH box helicase KSA16_001965 PF17191 RecG wedge domain KSA16_001965 PF00271 Helicase conserved C-terminal domain KSA16_001980 PF01553 Acyltransferase KSA16_001990 PF00375 Sodium:dicarboxylate symporter family KSA16_002000 PF01926 50S ribosome-binding GTPase KSA16_002005 PF02082 Transcriptional regulator KSA16_002010 PF00970 Oxidoreductase FAD-binding domain KSA16_002010 PF00042 Globin KSA16_002010 PF00175 Oxidoreductase NAD-binding domain KSA16_002015 PF05872 Bacterial protein of unknown function (DUF853) KSA16_002020 PF01053 Cys/Met metabolism PLP-dependent enzyme KSA16_002025 PF00117 Glutamine amidotransferase class-I KSA16_002030 PF00338 Ribosomal protein S10p/S20e KSA16_002035 PF00297 Ribosomal protein L3 KSA16_002040 PF00573 Ribosomal protein L4/L1 family KSA16_002045 PF00276 Ribosomal protein L23 KSA16_002050 PF03947 Ribosomal Proteins L2, C-terminal domain KSA16_002050 PF00181 Ribosomal Proteins L2, RNA binding domain KSA16_002055 PF00203 Ribosomal protein S19 KSA16_002060 PF00237 Ribosomal protein L22p/L17e KSA16_002070 PF00252 Ribosomal protein L16p/L10e KSA16_002075 PF00831 Ribosomal L29 protein KSA16_002080 PF00366 Ribosomal protein S17 KSA16_002085 PF00238 Ribosomal protein L14p/L23e KSA16_002090 PF00467 KOW motif KSA16_002090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KSA16_002095 PF00281 Ribosomal protein L5 KSA16_002095 PF00673 ribosomal L5P family C-terminus KSA16_002100 PF00253 Ribosomal protein S14p/S29e KSA16_002105 PF00410 Ribosomal protein S8 KSA16_002110 PF00347 Ribosomal protein L6 KSA16_002115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KSA16_002120 PF00333 Ribosomal protein S5, N-terminal domain KSA16_002120 PF03719 Ribosomal protein S5, C-terminal domain KSA16_002125 PF00327 Ribosomal protein L30p/L7e KSA16_002130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KSA16_002135 PF00344 SecY translocase KSA16_002140 PF00444 Ribosomal protein L36 KSA16_002145 PF00416 Ribosomal protein S13/S18 KSA16_002150 PF00411 Ribosomal protein S11 KSA16_002155 PF00163 Ribosomal protein S4/S9 N-terminal domain KSA16_002155 PF01479 S4 domain KSA16_002160 PF01000 RNA polymerase Rpb3/RpoA insert domain KSA16_002160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KSA16_002160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KSA16_002165 PF01196 Ribosomal protein L17 KSA16_002170 PF00743 Flavin-binding monooxygenase-like KSA16_002175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_002175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_002175 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_002180 PF03937 Flavinator of succinate dehydrogenase KSA16_002210 PF09526 Probable metal-binding protein (DUF2387) KSA16_002215 PF01432 Peptidase family M3 KSA16_002220 PF00773 RNB domain KSA16_002220 PF08206 Ribonuclease B OB domain KSA16_002220 PF00575 S1 RNA binding domain KSA16_002220 PF17876 Cold shock domain KSA16_002220 PF08461 Ribonuclease R winged-helix domain KSA16_002265 PF01557 Fumarylacetoacetate (FAA) hydrolase family KSA16_002270 PF12833 Helix-turn-helix domain KSA16_002275 PF00892 EamA-like transporter family KSA16_002280 PF03631 Virulence factor BrkB KSA16_002285 PF03358 NADPH-dependent FMN reductase KSA16_002310 PF02130 Uncharacterized protein family UPF0054 KSA16_002315 PF02562 PhoH-like protein KSA16_002320 PF04055 Radical SAM superfamily KSA16_002320 PF01938 TRAM domain KSA16_002320 PF00919 Uncharacterized protein family UPF0004 KSA16_002325 PF01464 Transglycosylase SLT domain KSA16_002325 PF10145 Phage-related minor tail protein KSA16_002325 PF01551 Peptidase family M23 KSA16_002335 PF00056 lactate/malate dehydrogenase, NAD binding domain KSA16_002335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KSA16_002355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KSA16_002360 PF01066 CDP-alcohol phosphatidyltransferase KSA16_002405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_002405 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_002405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_002410 PF17932 Tetracyclin repressor-like, C-terminal domain KSA16_002410 PF00440 Bacterial regulatory proteins, tetR family KSA16_002425 PF01039 Carboxyl transferase domain KSA16_002430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_002430 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_002430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_002440 PF02785 Biotin carboxylase C-terminal domain KSA16_002440 PF00364 Biotin-requiring enzyme KSA16_002440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSA16_002440 PF00289 Biotin carboxylase, N-terminal domain KSA16_002450 PF04386 Stringent starvation protein B KSA16_002455 PF00043 Glutathione S-transferase, C-terminal domain KSA16_002455 PF13417 Glutathione S-transferase, N-terminal domain KSA16_002460 PF00380 Ribosomal protein S9/S16 KSA16_002465 PF00572 Ribosomal protein L13 KSA16_002470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KSA16_002475 PF00398 Ribosomal RNA adenine dimethylase KSA16_002480 PF00149 Calcineurin-like phosphoesterase KSA16_002500 PF13167 GTP-binding GTPase N-terminal KSA16_002500 PF16360 GTP-binding GTPase Middle Region KSA16_002500 PF01926 50S ribosome-binding GTPase KSA16_002510 PF13091 PLD-like domain KSA16_002515 PF00149 Calcineurin-like phosphoesterase KSA16_002515 PF10518 TAT (twin-arginine translocation) pathway signal sequence KSA16_002520 PF00691 OmpA family KSA16_002520 PF01389 OmpA-like transmembrane domain KSA16_002525 PF17152 Periplasmic sensor domain KSA16_002525 PF00990 Diguanylate cyclase, GGDEF domain KSA16_002560 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_002560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSA16_002570 PF00753 Metallo-beta-lactamase superfamily KSA16_002570 PF04273 Putative phosphatase (DUF442) KSA16_002575 PF00561 alpha/beta hydrolase fold KSA16_002580 PF00085 Thioredoxin KSA16_002585 PF03061 Thioesterase superfamily KSA16_002595 PF04461 Protein of unknown function (DUF520) KSA16_002605 PF01266 FAD dependent oxidoreductase KSA16_002605 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KSA16_002615 PF03795 YCII-related domain KSA16_002620 PF04279 Intracellular septation protein A KSA16_002625 PF02811 PHP domain KSA16_002630 PF01062 Bestrophin, RFP-TM, chloride channel KSA16_002635 PF04002 RadC-like JAB domain KSA16_002640 PF04127 DNA / pantothenate metabolism flavoprotein KSA16_002640 PF02441 Flavoprotein KSA16_002645 PF07549 SecD/SecF GG Motif KSA16_002645 PF02355 Protein export membrane protein KSA16_002650 PF07549 SecD/SecF GG Motif KSA16_002650 PF13721 SecD export protein N-terminal TM region KSA16_002650 PF02355 Protein export membrane protein KSA16_002655 PF02699 Preprotein translocase subunit KSA16_002660 PF01702 Queuine tRNA-ribosyltransferase KSA16_002675 PF02547 Queuosine biosynthesis protein KSA16_002705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_002705 PF00512 His Kinase A (phospho-acceptor) domain KSA16_002705 PF07689 KaiB domain KSA16_002710 PF03710 Glutamate-ammonia ligase adenylyltransferase KSA16_002710 PF08335 GlnD PII-uridylyltransferase KSA16_002715 PF01063 Amino-transferase class IV KSA16_002730 PF01522 Polysaccharide deacetylase KSA16_002735 PF00535 Glycosyl transferase family 2 KSA16_002740 PF13439 Glycosyltransferase Family 4 KSA16_002740 PF00534 Glycosyl transferases group 1 KSA16_002765 PF17101 Stealth protein CR1, conserved region 1 KSA16_002765 PF11380 Stealth protein CR2, conserved region 2 KSA16_002765 PF17102 Stealth protein CR3, conserved region 3 KSA16_002770 PF02938 GAD domain KSA16_002770 PF00152 tRNA synthetases class II (D, K and N) KSA16_002770 PF01336 OB-fold nucleic acid binding domain KSA16_002780 PF07715 TonB-dependent Receptor Plug Domain KSA16_002780 PF00593 TonB dependent receptor KSA16_002800 PF06146 Phosphate-starvation-inducible E KSA16_002805 PF00043 Glutathione S-transferase, C-terminal domain KSA16_002805 PF02798 Glutathione S-transferase, N-terminal domain KSA16_002810 PF03466 LysR substrate binding domain KSA16_002810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_002815 PF12806 Acetyl-CoA dehydrogenase C-terminal like KSA16_002815 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_002815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_002815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_002820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_002820 PF12806 Acetyl-CoA dehydrogenase C-terminal like KSA16_002820 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_002820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_002830 PF00512 His Kinase A (phospho-acceptor) domain KSA16_002830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_002830 PF00672 HAMP domain KSA16_002835 PF00486 Transcriptional regulatory protein, C terminal KSA16_002835 PF00072 Response regulator receiver domain KSA16_002840 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KSA16_002860 PF01923 Cobalamin adenosyltransferase KSA16_002865 PF07715 TonB-dependent Receptor Plug Domain KSA16_002865 PF00593 TonB dependent receptor KSA16_002870 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KSA16_002875 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_002900 PF00290 Tryptophan synthase alpha chain KSA16_002905 PF01039 Carboxyl transferase domain KSA16_002910 PF02875 Mur ligase family, glutamate ligase domain KSA16_002910 PF08245 Mur ligase middle domain KSA16_002925 PF00753 Metallo-beta-lactamase superfamily KSA16_002930 PF10417 C-terminal domain of 1-Cys peroxiredoxin KSA16_002930 PF00578 AhpC/TSA family KSA16_002935 PF07516 SecA Wing and Scaffold domain KSA16_002935 PF01043 SecA preprotein cross-linking domain KSA16_002935 PF02810 SEC-C motif KSA16_002935 PF07517 SecA DEAD-like domain KSA16_002945 PF00083 Sugar (and other) transporter KSA16_002945 PF07690 Major Facilitator Superfamily KSA16_002950 PF03006 Haemolysin-III related KSA16_002975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSA16_002975 PF00378 Enoyl-CoA hydratase/isomerase KSA16_002975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSA16_002980 PF02803 Thiolase, C-terminal domain KSA16_002980 PF00108 Thiolase, N-terminal domain KSA16_002985 PF02311 AraC-like ligand binding domain KSA16_002985 PF12833 Helix-turn-helix domain KSA16_002990 PF02515 CoA-transferase family III KSA16_002995 PF04966 Carbohydrate-selective porin, OprB family KSA16_003000 PF01011 PQQ enzyme repeat KSA16_003005 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KSA16_003005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KSA16_003015 PF00893 Small Multidrug Resistance protein KSA16_003025 PF02803 Thiolase, C-terminal domain KSA16_003025 PF00108 Thiolase, N-terminal domain KSA16_003035 PF13505 Outer membrane protein beta-barrel domain KSA16_003035 PF00691 OmpA family KSA16_003045 PF01139 tRNA-splicing ligase RtcB KSA16_003050 PF00324 Amino acid permease KSA16_003055 PF08468 Methyltransferase small domain N-terminal KSA16_003055 PF05175 Methyltransferase small domain KSA16_003060 PF00860 Permease family KSA16_003065 PF00679 Elongation factor G C-terminus KSA16_003065 PF00009 Elongation factor Tu GTP binding domain KSA16_003065 PF03144 Elongation factor Tu domain 2 KSA16_003070 PF01741 Large-conductance mechanosensitive channel, MscL KSA16_003085 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KSA16_003085 PF06827 Zinc finger found in FPG and IleRS KSA16_003085 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KSA16_003090 PF02245 Methylpurine-DNA glycosylase (MPG) KSA16_003110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_003125 PF10411 Disulfide bond isomerase protein N-terminus KSA16_003125 PF13098 Thioredoxin-like domain KSA16_003130 PF01571 Aminomethyltransferase folate-binding domain KSA16_003140 PF04343 Protein of unknown function, DUF488 KSA16_003145 PF08274 PhnA Zinc-Ribbon KSA16_003145 PF03831 PhnA domain KSA16_003150 PF07411 Domain of unknown function (DUF1508) KSA16_003155 PF04073 Aminoacyl-tRNA editing domain KSA16_003155 PF03129 Anticodon binding domain KSA16_003155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSA16_003160 PF00873 AcrB/AcrD/AcrF family KSA16_003175 PF00072 Response regulator receiver domain KSA16_003180 PF00072 Response regulator receiver domain KSA16_003185 PF01584 CheW-like domain KSA16_003190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSA16_003190 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KSA16_003195 PF01627 Hpt domain KSA16_003195 PF00072 Response regulator receiver domain KSA16_003195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_003195 PF01584 CheW-like domain KSA16_003205 PF07687 Peptidase dimerisation domain KSA16_003205 PF01546 Peptidase family M20/M25/M40 KSA16_003210 PF08085 Entericidin EcnA/B family KSA16_003220 PF04304 Protein of unknown function (DUF454) KSA16_003225 PF17969 L,D-transpeptidase C-terminal domain KSA16_003225 PF03734 L,D-transpeptidase catalytic domain KSA16_003265 PF00258 Flavodoxin KSA16_003265 PF00175 Oxidoreductase NAD-binding domain KSA16_003265 PF00667 FAD binding domain KSA16_003275 PF12805 FUSC-like inner membrane protein yccS KSA16_003280 PF07690 Major Facilitator Superfamily KSA16_003285 PF00881 Nitroreductase family KSA16_003300 PF01235 Sodium:alanine symporter family KSA16_003305 PF01734 Patatin-like phospholipase KSA16_003310 PF13291 ACT domain KSA16_003310 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_003315 PF05992 SbmA/BacA-like family KSA16_003345 PF02934 GatB/GatE catalytic domain KSA16_003345 PF02637 GatB domain KSA16_003350 PF01425 Amidase KSA16_003355 PF02686 Glu-tRNAGln amidotransferase C subunit KSA16_003365 PF04085 rod shape-determining protein MreC KSA16_003370 PF04093 rod shape-determining protein MreD KSA16_003375 PF02545 Maf-like protein KSA16_003380 PF00575 S1 RNA binding domain KSA16_003380 PF10150 Ribonuclease E/G family KSA16_003390 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KSA16_003390 PF06974 Protein of unknown function (DUF1298) KSA16_003395 PF01507 Phosphoadenosine phosphosulfate reductase family KSA16_003410 PF02525 Flavodoxin-like fold KSA16_003430 PF02673 Bacitracin resistance protein BacA KSA16_003435 PF06719 AraC-type transcriptional regulator N-terminus KSA16_003435 PF12833 Helix-turn-helix domain KSA16_003440 PF00698 Acyl transferase domain KSA16_003440 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_003440 PF08990 Erythronolide synthase docking KSA16_003440 PF16197 Ketoacyl-synthetase C-terminal extension KSA16_003440 PF00109 Beta-ketoacyl synthase, N-terminal domain KSA16_003440 PF02801 Beta-ketoacyl synthase, C-terminal domain KSA16_003440 PF08659 KR domain KSA16_003440 PF00550 Phosphopantetheine attachment site KSA16_003440 PF14765 Polyketide synthase dehydratase KSA16_003440 PF09277 Erythronolide synthase, docking KSA16_003445 PF01965 DJ-1/PfpI family KSA16_003455 PF00324 Amino acid permease KSA16_003460 PF04303 PrpF protein KSA16_003465 PF00348 Polyprenyl synthetase KSA16_003470 PF04237 YjbR KSA16_003475 PF01145 SPFH domain / Band 7 family KSA16_003485 PF01734 Patatin-like phospholipase KSA16_003505 PF00884 Sulfatase KSA16_003505 PF08019 Phosphoethanolamine transferase EptA/EptB KSA16_003510 PF00486 Transcriptional regulatory protein, C terminal KSA16_003510 PF00072 Response regulator receiver domain KSA16_003515 PF08521 Two-component sensor kinase N-terminal KSA16_003515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_003515 PF00512 His Kinase A (phospho-acceptor) domain KSA16_003525 PF00909 Ammonium Transporter Family KSA16_003530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_003530 PF03466 LysR substrate binding domain KSA16_003550 PF10458 Valyl tRNA synthetase tRNA binding arm KSA16_003550 PF08264 Anticodon-binding domain of tRNA KSA16_003550 PF00133 tRNA synthetases class I (I, L, M and V) KSA16_003570 PF01906 Putative heavy-metal-binding KSA16_003575 PF01906 Putative heavy-metal-binding KSA16_003580 PF02321 Outer membrane efflux protein KSA16_003585 PF00873 AcrB/AcrD/AcrF family KSA16_003590 PF00529 HlyD membrane-fusion protein of T1SS KSA16_003590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_003595 PF01569 PAP2 superfamily KSA16_003605 PF00348 Polyprenyl synthetase KSA16_003615 PF00829 Ribosomal prokaryotic L21 protein KSA16_003620 PF01016 Ribosomal L27 protein KSA16_003625 PF03548 Outer membrane lipoprotein carrier protein LolA KSA16_003635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSA16_003635 PF02403 Seryl-tRNA synthetase N-terminal domain KSA16_003640 PF10414 Sirohaem synthase dimerisation region KSA16_003640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSA16_003640 PF14824 Sirohaem biosynthesis protein central KSA16_003645 PF00588 SpoU rRNA Methylase family KSA16_003650 PF01638 HxlR-like helix-turn-helix KSA16_003655 PF03358 NADPH-dependent FMN reductase KSA16_003660 PF13520 Amino acid permease KSA16_003665 PF00465 Iron-containing alcohol dehydrogenase KSA16_003675 PF03099 Biotin/lipoate A/B protein ligase family KSA16_003680 PF04359 Protein of unknown function (DUF493) KSA16_003685 PF03979 Sigma-70 factor, region 1.1 KSA16_003685 PF00140 Sigma-70 factor, region 1.2 KSA16_003685 PF04542 Sigma-70 region 2 KSA16_003685 PF04539 Sigma-70 region 3 KSA16_003685 PF04545 Sigma-70, region 4 KSA16_003685 PF04546 Sigma-70, non-essential region KSA16_003705 PF00581 Rhodanese-like domain KSA16_003705 PF17773 UPF0176 acylphosphatase like domain KSA16_003715 PF00285 Citrate synthase, C-terminal domain KSA16_003720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KSA16_003725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KSA16_003730 PF00890 FAD binding domain KSA16_003730 PF02910 Fumarate reductase flavoprotein C-term KSA16_003735 PF13085 2Fe-2S iron-sulfur cluster binding domain KSA16_003750 PF16078 2-oxoglutarate dehydrogenase N-terminus KSA16_003750 PF00676 Dehydrogenase E1 component KSA16_003750 PF16870 2-oxoglutarate dehydrogenase C-terminal KSA16_003750 PF02779 Transketolase, pyrimidine binding domain KSA16_003755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSA16_003755 PF00364 Biotin-requiring enzyme KSA16_003755 PF02817 e3 binding domain KSA16_003760 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_003760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSA16_003765 PF08442 ATP-grasp domain KSA16_003765 PF00549 CoA-ligase KSA16_003770 PF00549 CoA-ligase KSA16_003770 PF02629 CoA binding domain KSA16_003775 PF00579 tRNA synthetases class I (W and Y) KSA16_003780 PF05661 Protein of unknown function (DUF808) KSA16_003785 PF04228 Putative neutral zinc metallopeptidase KSA16_003790 PF00999 Sodium/hydrogen exchanger family KSA16_003810 PF09587 Bacterial capsule synthesis protein PGA_cap KSA16_003820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSA16_003825 PF00582 Universal stress protein family KSA16_003830 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_003835 PF01272 Transcription elongation factor, GreA/GreB, C-term KSA16_003835 PF03449 Transcription elongation factor, N-terminal KSA16_003840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSA16_003840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSA16_003840 PF02142 MGS-like domain KSA16_003845 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KSA16_003845 PF00117 Glutamine amidotransferase class-I KSA16_003860 PF01985 CRS1 / YhbY (CRM) domain KSA16_003865 PF01728 FtsJ-like methyltransferase KSA16_003870 PF17862 AAA+ lid domain KSA16_003870 PF06480 FtsH Extracellular KSA16_003870 PF01434 Peptidase family M41 KSA16_003870 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_003875 PF00809 Pterin binding enzyme KSA16_003895 PF09423 PhoD-like phosphatase KSA16_003895 PF16655 PhoD-like phosphatase, N-terminal domain KSA16_003910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KSA16_003910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KSA16_003925 PF00083 Sugar (and other) transporter KSA16_003930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSA16_003930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSA16_003935 PF01266 FAD dependent oxidoreductase KSA16_003935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KSA16_003940 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KSA16_003940 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KSA16_003945 PF00781 Diacylglycerol kinase catalytic domain KSA16_003950 PF00149 Calcineurin-like phosphoesterase KSA16_003960 PF00166 Chaperonin 10 Kd subunit KSA16_003965 PF00118 TCP-1/cpn60 chaperonin family KSA16_003970 PF01219 Prokaryotic diacylglycerol kinase KSA16_003975 PF00753 Metallo-beta-lactamase superfamily KSA16_003980 PF03009 Glycerophosphoryl diester phosphodiesterase family KSA16_003985 PF00873 AcrB/AcrD/AcrF family KSA16_003995 PF01435 Peptidase family M48 KSA16_004000 PF01464 Transglycosylase SLT domain KSA16_004005 PF01171 PP-loop family KSA16_004015 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSA16_004015 PF01464 Transglycosylase SLT domain KSA16_004020 PF03449 Transcription elongation factor, N-terminal KSA16_004020 PF01272 Transcription elongation factor, GreA/GreB, C-term KSA16_004035 PF00550 Phosphopantetheine attachment site KSA16_004035 PF13193 AMP-binding enzyme C-terminal domain KSA16_004035 PF00975 Thioesterase domain KSA16_004035 PF00501 AMP-binding enzyme KSA16_004035 PF00668 Condensation domain KSA16_004065 PF00881 Nitroreductase family KSA16_004080 PF02595 Glycerate kinase family KSA16_004085 PF00384 Molybdopterin oxidoreductase KSA16_004090 PF02634 FdhD/NarQ family KSA16_004095 PF06803 Protein of unknown function (DUF1232) KSA16_004100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSA16_004100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSA16_004100 PF11890 Domain of unknown function (DUF3410) KSA16_004105 PF00152 tRNA synthetases class II (D, K and N) KSA16_004115 PF18073 Rubredoxin metal binding domain KSA16_004120 PF00324 Amino acid permease KSA16_004130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KSA16_004130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KSA16_004135 PF01678 Diaminopimelate epimerase KSA16_004140 PF01810 LysE type translocator KSA16_004145 PF02899 Phage integrase, N-terminal SAM-like domain KSA16_004145 PF00589 Phage integrase family KSA16_004150 PF01012 Electron transfer flavoprotein domain KSA16_004155 PF01012 Electron transfer flavoprotein domain KSA16_004155 PF00766 Electron transfer flavoprotein FAD-binding domain KSA16_004160 PF03989 DNA gyrase C-terminal domain, beta-propeller KSA16_004160 PF00521 DNA gyrase/topoisomerase IV, subunit A KSA16_004175 PF00535 Glycosyl transferase family 2 KSA16_004195 PF13533 Biotin-lipoyl like KSA16_004205 PF00266 Aminotransferase class-V KSA16_004220 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KSA16_004230 PF02687 FtsX-like permease family KSA16_004230 PF12704 MacB-like periplasmic core domain KSA16_004235 PF00005 ABC transporter KSA16_004240 PF03772 Competence protein KSA16_004240 PF13567 Domain of unknown function (DUF4131) KSA16_004240 PF00753 Metallo-beta-lactamase superfamily KSA16_004250 PF06965 Na+/H+ antiporter 1 KSA16_004250 PF01343 Peptidase family S49 KSA16_004255 PF12697 Alpha/beta hydrolase family KSA16_004260 PF00551 Formyl transferase KSA16_004265 PF02769 AIR synthase related protein, C-terminal domain KSA16_004265 PF00586 AIR synthase related protein, N-terminal domain KSA16_004270 PF01594 AI-2E family transporter KSA16_004275 PF11638 DnaA N-terminal domain KSA16_004275 PF00308 Bacterial dnaA protein KSA16_004275 PF08299 Bacterial dnaA protein helix-turn-helix KSA16_004305 PF08032 RNA 2'-O ribose methyltransferase substrate binding KSA16_004305 PF00588 SpoU rRNA Methylase family KSA16_004310 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KSA16_004320 PF00691 OmpA family KSA16_004325 PF07676 WD40-like Beta Propeller Repeat KSA16_004325 PF04052 TolB amino-terminal domain KSA16_004335 PF02472 Biopolymer transport protein ExbD/TolR KSA16_004340 PF01618 MotA/TolQ/ExbB proton channel family KSA16_004345 PF03061 Thioesterase superfamily KSA16_004350 PF07687 Peptidase dimerisation domain KSA16_004350 PF01546 Peptidase family M20/M25/M40 KSA16_004355 PF17864 RuvB AAA lid domain KSA16_004355 PF05491 RuvB C-terminal winged helix domain KSA16_004355 PF05496 Holliday junction DNA helicase RuvB P-loop domain KSA16_004360 PF07499 RuvA, C-terminal domain KSA16_004360 PF01330 RuvA N terminal domain KSA16_004365 PF01966 HD domain KSA16_004370 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KSA16_004370 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KSA16_004370 PF02769 AIR synthase related protein, C-terminal domain KSA16_004375 PF07690 Major Facilitator Superfamily KSA16_004380 PF01784 NIF3 (NGG1p interacting factor 3) KSA16_004385 PF00378 Enoyl-CoA hydratase/isomerase KSA16_004390 PF01467 Cytidylyltransferase-like KSA16_004390 PF00293 NUDIX domain KSA16_004400 PF00578 AhpC/TSA family KSA16_004415 PF06508 Queuosine biosynthesis protein QueC KSA16_004425 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KSA16_004425 PF14602 Hexapeptide repeat of succinyl-transferase KSA16_004425 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_004435 PF03466 LysR substrate binding domain KSA16_004435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_004440 PF12857 TOBE-like domain KSA16_004440 PF00005 ABC transporter KSA16_004445 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_004450 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_004465 PF01063 Amino-transferase class IV KSA16_004470 PF02618 YceG-like family KSA16_004475 PF02223 Thymidylate kinase KSA16_004485 PF00890 FAD binding domain KSA16_004485 PF02910 Fumarate reductase flavoprotein C-term KSA16_004490 PF13180 PDZ domain KSA16_004500 PF06421 GTP-binding protein LepA C-terminus KSA16_004500 PF03144 Elongation factor Tu domain 2 KSA16_004500 PF00679 Elongation factor G C-terminus KSA16_004500 PF00009 Elongation factor Tu GTP binding domain KSA16_004505 PF10502 Signal peptidase, peptidase S26 KSA16_004515 PF00035 Double-stranded RNA binding motif KSA16_004515 PF14622 Ribonuclease-III-like KSA16_004520 PF07650 KH domain KSA16_004520 PF01926 50S ribosome-binding GTPase KSA16_004530 PF02565 Recombination protein O C terminal KSA16_004530 PF11967 Recombination protein O N terminal KSA16_004535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KSA16_004540 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KSA16_004545 PF00106 short chain dehydrogenase KSA16_004575 PF00155 Aminotransferase class I and II KSA16_004585 PF00990 Diguanylate cyclase, GGDEF domain KSA16_004585 PF17151 Periplasmic sensor domain KSA16_004595 PF02151 UvrB/uvrC motif KSA16_004595 PF12344 Ultra-violet resistance protein B KSA16_004595 PF04851 Type III restriction enzyme, res subunit KSA16_004595 PF17757 UvrB interaction domain KSA16_004595 PF00271 Helicase conserved C-terminal domain KSA16_004610 PF00892 EamA-like transporter family KSA16_004615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSA16_004615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSA16_004630 PF01926 50S ribosome-binding GTPase KSA16_004630 PF01018 GTP1/OBG KSA16_004635 PF01472 PUA domain KSA16_004635 PF00696 Amino acid kinase family KSA16_004645 PF07759 Protein of unknown function (DUF1615) KSA16_004650 PF01207 Dihydrouridine synthase (Dus) KSA16_004655 PF03060 Nitronate monooxygenase KSA16_004670 PF02350 UDP-N-acetylglucosamine 2-epimerase KSA16_004700 PF03441 FAD binding domain of DNA photolyase KSA16_004700 PF00875 DNA photolyase KSA16_004705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSA16_004710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_004715 PF00768 D-alanyl-D-alanine carboxypeptidase KSA16_004715 PF07943 Penicillin-binding protein 5, C-terminal domain KSA16_004725 PF03971 Monomeric isocitrate dehydrogenase KSA16_004730 PF00849 RNA pseudouridylate synthase KSA16_004735 PF00180 Isocitrate/isopropylmalate dehydrogenase KSA16_004755 PF06779 Uncharacterised MFS-type transporter YbfB KSA16_004760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_004760 PF03466 LysR substrate binding domain KSA16_004765 PF00375 Sodium:dicarboxylate symporter family KSA16_004770 PF02567 Phenazine biosynthesis-like protein KSA16_004775 PF05193 Peptidase M16 inactive domain KSA16_004775 PF00675 Insulinase (Peptidase family M16) KSA16_004800 PF02581 Thiamine monophosphate synthase KSA16_004805 PF00202 Aminotransferase class-III KSA16_004815 PF00849 RNA pseudouridylate synthase KSA16_004820 PF00176 SNF2 family N-terminal domain KSA16_004820 PF00271 Helicase conserved C-terminal domain KSA16_004820 PF12137 RNA polymerase recycling family C-terminal KSA16_004820 PF18337 RapA N-terminal Tudor like domain KSA16_004820 PF18339 RapA N-terminal Tudor like domain 1 KSA16_004830 PF00440 Bacterial regulatory proteins, tetR family KSA16_004835 PF00970 Oxidoreductase FAD-binding domain KSA16_004835 PF00175 Oxidoreductase NAD-binding domain KSA16_004835 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_004840 PF00487 Fatty acid desaturase KSA16_004850 PF00440 Bacterial regulatory proteins, tetR family KSA16_004850 PF17754 MftR C-terminal domain KSA16_004860 PF00202 Aminotransferase class-III KSA16_004865 PF00282 Pyridoxal-dependent decarboxylase conserved domain KSA16_004870 PF00171 Aldehyde dehydrogenase family KSA16_004875 PF01037 Lrp/AsnC ligand binding domain KSA16_004880 PF00205 Thiamine pyrophosphate enzyme, central domain KSA16_004880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSA16_004880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSA16_004885 PF00324 Amino acid permease KSA16_004890 PF12849 PBP superfamily domain KSA16_004895 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_004900 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_004905 PF00005 ABC transporter KSA16_004910 PF08496 Peptidase family S49 N-terminal KSA16_004910 PF01343 Peptidase family S49 KSA16_004925 PF00206 Lyase KSA16_004925 PF08328 Adenylosuccinate lyase C-terminal KSA16_004930 PF04356 Protein of unknown function (DUF489) KSA16_004940 PF13344 Haloacid dehalogenase-like hydrolase KSA16_004940 PF00293 NUDIX domain KSA16_004945 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_004950 PF07943 Penicillin-binding protein 5, C-terminal domain KSA16_004950 PF00768 D-alanyl-D-alanine carboxypeptidase KSA16_004965 PF01975 Survival protein SurE KSA16_004970 PF01476 LysM domain KSA16_004970 PF01551 Peptidase family M23 KSA16_004975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_004975 PF03466 LysR substrate binding domain KSA16_004980 PF13654 AAA domain KSA16_004980 PF05362 Lon protease (S16) C-terminal proteolytic domain KSA16_004985 PF07690 Major Facilitator Superfamily KSA16_004990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSA16_004995 PF13593 SBF-like CPA transporter family (DUF4137) KSA16_005000 PF01197 Ribosomal protein L31 KSA16_005015 PF04055 Radical SAM superfamily KSA16_005020 PF01132 Elongation factor P (EF-P) OB domain KSA16_005020 PF08207 Elongation factor P (EF-P) KOW-like domain KSA16_005020 PF09285 Elongation factor P, C-terminal KSA16_005025 PF02554 Carbon starvation protein CstA KSA16_005025 PF13722 5TM C-terminal transporter carbon starvation CstA KSA16_005030 PF04328 Selenoprotein, putative KSA16_005065 PF06018 CodY GAF-like domain KSA16_005065 PF17853 GGDEF-like domain KSA16_005065 PF13556 PucR C-terminal helix-turn-helix domain KSA16_005080 PF00171 Aldehyde dehydrogenase family KSA16_005085 PF00324 Amino acid permease KSA16_005090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_005090 PF03466 LysR substrate binding domain KSA16_005095 PF02028 BCCT, betaine/carnitine/choline family transporter KSA16_005100 PF02028 BCCT, betaine/carnitine/choline family transporter KSA16_005105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KSA16_005105 PF00355 Rieske [2Fe-2S] domain KSA16_005110 PF00171 Aldehyde dehydrogenase family KSA16_005120 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_005120 PF18113 Rubredoxin binding C-terminal domain KSA16_005125 PF01266 FAD dependent oxidoreductase KSA16_005125 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KSA16_005145 PF00892 EamA-like transporter family KSA16_005155 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KSA16_005160 PF00083 Sugar (and other) transporter KSA16_005165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KSA16_005165 PF13378 Enolase C-terminal domain-like KSA16_005170 PF08990 Erythronolide synthase docking KSA16_005170 PF00698 Acyl transferase domain KSA16_005170 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_005170 PF09277 Erythronolide synthase, docking KSA16_005170 PF16197 Ketoacyl-synthetase C-terminal extension KSA16_005170 PF00109 Beta-ketoacyl synthase, N-terminal domain KSA16_005170 PF02801 Beta-ketoacyl synthase, C-terminal domain KSA16_005170 PF08659 KR domain KSA16_005170 PF00550 Phosphopantetheine attachment site KSA16_005170 PF14765 Polyketide synthase dehydratase KSA16_005175 PF00440 Bacterial regulatory proteins, tetR family KSA16_005195 PF17954 Quercetinase C-terminal cupin domain KSA16_005195 PF02678 Pirin KSA16_005205 PF08348 YheO-like PAS domain KSA16_005205 PF13309 HTH domain KSA16_005215 PF00668 Condensation domain KSA16_005215 PF00550 Phosphopantetheine attachment site KSA16_005215 PF13193 AMP-binding enzyme C-terminal domain KSA16_005215 PF00501 AMP-binding enzyme KSA16_005220 PF00550 Phosphopantetheine attachment site KSA16_005220 PF13193 AMP-binding enzyme C-terminal domain KSA16_005220 PF00668 Condensation domain KSA16_005220 PF00975 Thioesterase domain KSA16_005220 PF00501 AMP-binding enzyme KSA16_005225 PF01032 FecCD transport family KSA16_005230 PF01032 FecCD transport family KSA16_005235 PF00005 ABC transporter KSA16_005240 PF01497 Periplasmic binding protein KSA16_005245 PF07715 TonB-dependent Receptor Plug Domain KSA16_005245 PF00593 TonB dependent receptor KSA16_005250 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KSA16_005255 PF00668 Condensation domain KSA16_005255 PF00550 Phosphopantetheine attachment site KSA16_005255 PF00501 AMP-binding enzyme KSA16_005260 PF13193 AMP-binding enzyme C-terminal domain KSA16_005260 PF00501 AMP-binding enzyme KSA16_005265 PF00550 Phosphopantetheine attachment site KSA16_005265 PF00857 Isochorismatase family KSA16_005270 PF00282 Pyridoxal-dependent decarboxylase conserved domain KSA16_005280 PF00005 ABC transporter KSA16_005285 PF00005 ABC transporter KSA16_005290 PF00975 Thioesterase domain KSA16_005300 PF00425 chorismate binding enzyme KSA16_005310 PF01208 Uroporphyrinogen decarboxylase (URO-D) KSA16_005315 PF05675 Protein of unknown function (DUF817) KSA16_005330 PF00144 Beta-lactamase KSA16_005340 PF01227 GTP cyclohydrolase I KSA16_005345 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_005345 PF01799 [2Fe-2S] binding domain KSA16_005350 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KSA16_005350 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KSA16_005365 PF00218 Indole-3-glycerol phosphate synthase KSA16_005370 PF00591 Glycosyl transferase family, a/b domain KSA16_005370 PF02885 Glycosyl transferase family, helical bundle domain KSA16_005375 PF07715 TonB-dependent Receptor Plug Domain KSA16_005375 PF00593 TonB dependent receptor KSA16_005380 PF11838 ERAP1-like C-terminal domain KSA16_005380 PF01433 Peptidase family M1 domain KSA16_005385 PF00117 Glutamine amidotransferase class-I KSA16_005395 PF00854 POT family KSA16_005400 PF00120 Glutamine synthetase, catalytic domain KSA16_005400 PF03951 Glutamine synthetase, beta-Grasp domain KSA16_005405 PF04345 Chorismate lyase KSA16_005410 PF01040 UbiA prenyltransferase family KSA16_005450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KSA16_005450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KSA16_005455 PF01784 NIF3 (NGG1p interacting factor 3) KSA16_005460 PF13180 PDZ domain KSA16_005465 PF01743 Poly A polymerase head domain KSA16_005465 PF12627 Probable RNA and SrmB- binding site of polymerase A KSA16_005470 PF03949 Malic enzyme, NAD binding domain KSA16_005470 PF01515 Phosphate acetyl/butaryl transferase KSA16_005470 PF00390 Malic enzyme, N-terminal domain KSA16_005475 PF00563 EAL domain KSA16_005475 PF00990 Diguanylate cyclase, GGDEF domain KSA16_005475 PF03707 Bacterial signalling protein N terminal repeat KSA16_005480 PF04452 RNA methyltransferase KSA16_005485 PF02219 Methylenetetrahydrofolate reductase KSA16_005490 PF05221 S-adenosyl-L-homocysteine hydrolase KSA16_005490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KSA16_005505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_005505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_005505 PF09317 Domain of unknown function (DUF1974) KSA16_005510 PF04055 Radical SAM superfamily KSA16_005515 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_005515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSA16_005525 PF07690 Major Facilitator Superfamily KSA16_005535 PF00557 Metallopeptidase family M24 KSA16_005540 PF00318 Ribosomal protein S2 KSA16_005545 PF00889 Elongation factor TS KSA16_005555 PF12833 Helix-turn-helix domain KSA16_005575 PF03330 Lytic transglycolase KSA16_005575 PF05036 Sporulation related domain KSA16_005580 PF13406 Transglycosylase SLT domain KSA16_005585 PF01098 Cell cycle protein KSA16_005595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KSA16_005595 PF14489 QueF-like protein KSA16_005600 PF01061 ABC-2 type transporter KSA16_005605 PF00005 ABC transporter KSA16_005635 PF00464 Serine hydroxymethyltransferase KSA16_005640 PF02321 Outer membrane efflux protein KSA16_005645 PF00873 AcrB/AcrD/AcrF family KSA16_005650 PF13533 Biotin-lipoyl like KSA16_005655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_005655 PF03466 LysR substrate binding domain KSA16_005660 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSA16_005665 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_005670 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_005675 PF00005 ABC transporter KSA16_005680 PF00893 Small Multidrug Resistance protein KSA16_005685 PF00037 4Fe-4S binding domain KSA16_005690 PF01136 Peptidase family U32 KSA16_005690 PF16325 Peptidase family U32 C-terminal domain KSA16_005695 PF00155 Aminotransferase class I and II KSA16_005695 PF00392 Bacterial regulatory proteins, gntR family KSA16_005700 PF02567 Phenazine biosynthesis-like protein KSA16_005705 PF00970 Oxidoreductase FAD-binding domain KSA16_005705 PF00175 Oxidoreductase NAD-binding domain KSA16_005710 PF01980 tRNA-methyltransferase O KSA16_005710 PF18389 TrmO C-terminal domain KSA16_005720 PF00437 Type II/IV secretion system protein KSA16_005720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KSA16_005730 PF00072 Response regulator receiver domain KSA16_005730 PF00486 Transcriptional regulatory protein, C terminal KSA16_005735 PF08521 Two-component sensor kinase N-terminal KSA16_005735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_005735 PF00512 His Kinase A (phospho-acceptor) domain KSA16_005745 PF00293 NUDIX domain KSA16_005755 PF00912 Transglycosylase KSA16_005755 PF14814 Bifunctional transglycosylase second domain KSA16_005755 PF00905 Penicillin binding protein transpeptidase domain KSA16_005760 PF01513 ATP-NAD kinase KSA16_005765 PF07023 Protein of unknown function (DUF1315) KSA16_005770 PF00591 Glycosyl transferase family, a/b domain KSA16_005770 PF02885 Glycosyl transferase family, helical bundle domain KSA16_005775 PF00375 Sodium:dicarboxylate symporter family KSA16_005780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_005780 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_005780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_005785 PF00756 Putative esterase KSA16_005790 PF01842 ACT domain KSA16_005790 PF01817 Chorismate mutase type II KSA16_005790 PF00800 Prephenate dehydratase KSA16_005795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSA16_005805 PF01546 Peptidase family M20/M25/M40 KSA16_005805 PF07687 Peptidase dimerisation domain KSA16_005810 PF12706 Beta-lactamase superfamily domain KSA16_005820 PF03883 Peroxide stress protein YaaA KSA16_005830 PF05690 Thiazole biosynthesis protein ThiG KSA16_005840 PF04241 Protein of unknown function (DUF423) KSA16_005845 PF00140 Sigma-70 factor, region 1.2 KSA16_005845 PF04542 Sigma-70 region 2 KSA16_005845 PF04545 Sigma-70, region 4 KSA16_005860 PF00313 'Cold-shock' DNA-binding domain KSA16_005865 PF00270 DEAD/DEAH box helicase KSA16_005865 PF00271 Helicase conserved C-terminal domain KSA16_005875 PF00881 Nitroreductase family KSA16_005880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KSA16_005880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KSA16_005900 PF01180 Dihydroorotate dehydrogenase KSA16_005905 PF02674 Colicin V production protein KSA16_005910 PF00156 Phosphoribosyl transferase domain KSA16_005925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSA16_005925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSA16_005930 PF01435 Peptidase family M48 KSA16_005935 PF09424 Yqey-like protein KSA16_005940 PF01165 Ribosomal protein S21 KSA16_005945 PF00814 Glycoprotease family KSA16_005965 PF00069 Protein kinase domain KSA16_005990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_005990 PF03466 LysR substrate binding domain KSA16_005995 PF00202 Aminotransferase class-III KSA16_006000 PF00171 Aldehyde dehydrogenase family KSA16_006005 PF00324 Amino acid permease KSA16_006035 PF04076 Bacterial OB fold (BOF) protein KSA16_006060 PF00561 alpha/beta hydrolase fold KSA16_006065 PF03616 Sodium/glutamate symporter KSA16_006075 PF00392 Bacterial regulatory proteins, gntR family KSA16_006075 PF07729 FCD domain KSA16_006125 PF08946 Osmosensory transporter coiled coil KSA16_006125 PF00083 Sugar (and other) transporter KSA16_006145 PF13610 DDE domain KSA16_006190 PF07091 Ribosomal RNA methyltransferase (FmrO) KSA16_006205 PF00005 ABC transporter KSA16_006205 PF12848 ABC transporter KSA16_006210 PF01636 Phosphotransferase enzyme family KSA16_006220 PF13817 IS66 C-terminal element KSA16_006220 PF13007 Transposase C of IS166 homeodomain KSA16_006220 PF03050 Transposase IS66 family KSA16_006220 PF13005 zinc-finger binding domain of transposase IS66 KSA16_006245 PF13610 DDE domain KSA16_006260 PF00375 Sodium:dicarboxylate symporter family KSA16_006270 PF16123 Hydroxyacylglutathione hydrolase C-terminus KSA16_006270 PF00753 Metallo-beta-lactamase superfamily KSA16_006275 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_006280 PF00005 ABC transporter KSA16_006280 PF09383 NIL domain KSA16_006285 PF03180 NLPA lipoprotein KSA16_006290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KSA16_006290 PF02844 Phosphoribosylglycinamide synthetase, N domain KSA16_006290 PF02843 Phosphoribosylglycinamide synthetase, C domain KSA16_006295 PF02142 MGS-like domain KSA16_006295 PF01808 AICARFT/IMPCHase bienzyme KSA16_006300 PF02954 Bacterial regulatory protein, Fis family KSA16_006320 PF01134 Glucose inhibited division protein A KSA16_006320 PF13932 GidA associated domain KSA16_006330 PF14403 Circularly permuted ATP-grasp type 2 KSA16_006340 PF01841 Transglutaminase-like superfamily KSA16_006340 PF08379 Bacterial transglutaminase-like N-terminal region KSA16_006350 PF01168 Alanine racemase, N-terminal domain KSA16_006350 PF00842 Alanine racemase, C-terminal domain KSA16_006355 PF00772 DnaB-like helicase N terminal domain KSA16_006355 PF03796 DnaB-like helicase C terminal domain KSA16_006360 PF03948 Ribosomal protein L9, C-terminal domain KSA16_006360 PF01281 Ribosomal protein L9, N-terminal domain KSA16_006365 PF01084 Ribosomal protein S18 KSA16_006370 PF01250 Ribosomal protein S6 KSA16_006375 PF01040 UbiA prenyltransferase family KSA16_006380 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KSA16_006385 PF00510 Cytochrome c oxidase subunit III KSA16_006390 PF00115 Cytochrome C and Quinol oxidase polypeptide I KSA16_006395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KSA16_006395 PF06481 COX Aromatic Rich Motif KSA16_006405 PF00391 PEP-utilising enzyme, mobile domain KSA16_006405 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KSA16_006405 PF02896 PEP-utilising enzyme, TIM barrel domain KSA16_006410 PF03618 Kinase/pyrophosphorylase KSA16_006420 PF14883 Hypothetical glycosyl hydrolase family 13 KSA16_006420 PF01522 Polysaccharide deacetylase KSA16_006425 PF00535 Glycosyl transferase family 2 KSA16_006430 PF13994 PgaD-like protein KSA16_006440 PF00296 Luciferase-like monooxygenase KSA16_006455 PF03466 LysR substrate binding domain KSA16_006455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_006465 PF00472 RF-1 domain KSA16_006465 PF03462 PCRF domain KSA16_006470 PF13847 Methyltransferase domain KSA16_006470 PF17827 PrmC N-terminal domain KSA16_006475 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_006480 PF09084 NMT1/THI5 like KSA16_006485 PF12833 Helix-turn-helix domain KSA16_006490 PF00106 short chain dehydrogenase KSA16_006495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_006495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_006495 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_006500 PF00501 AMP-binding enzyme KSA16_006500 PF13193 AMP-binding enzyme C-terminal domain KSA16_006505 PF01613 Flavin reductase like domain KSA16_006510 PF00899 ThiF family KSA16_006515 PF03109 ABC1 family KSA16_006530 PF03814 Potassium-transporting ATPase A subunit KSA16_006540 PF02669 K+-transporting ATPase, c chain KSA16_006545 PF02702 Osmosensitive K+ channel His kinase sensor domain KSA16_006545 PF13493 Domain of unknown function (DUF4118) KSA16_006545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_006545 PF00512 His Kinase A (phospho-acceptor) domain KSA16_006550 PF00072 Response regulator receiver domain KSA16_006550 PF00486 Transcriptional regulatory protein, C terminal KSA16_006555 PF00120 Glutamine synthetase, catalytic domain KSA16_006565 PF03232 Ubiquinone biosynthesis protein COQ7 KSA16_006570 PF07690 Major Facilitator Superfamily KSA16_006575 PF01103 Surface antigen KSA16_006575 PF07244 Surface antigen variable number repeat KSA16_006575 PF17243 POTRA domain TamA domain 1 KSA16_006590 PF06434 Aconitate hydratase 2 N-terminus KSA16_006590 PF00330 Aconitase family (aconitate hydratase) KSA16_006590 PF11791 Aconitate B N-terminal domain KSA16_006600 PF00027 Cyclic nucleotide-binding domain KSA16_006600 PF00520 Ion transport protein KSA16_006605 PF07690 Major Facilitator Superfamily KSA16_006620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_006620 PF03466 LysR substrate binding domain KSA16_006625 PF04284 Protein of unknown function (DUF441) KSA16_006635 PF01479 S4 domain KSA16_006635 PF00849 RNA pseudouridylate synthase KSA16_006650 PF01479 S4 domain KSA16_006650 PF00849 RNA pseudouridylate synthase KSA16_006655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KSA16_006660 PF08676 MutL C terminal dimerisation domain KSA16_006660 PF01119 DNA mismatch repair protein, C-terminal domain KSA16_006670 PF17209 Hfq protein KSA16_006680 PF00881 Nitroreductase family KSA16_006690 PF00149 Calcineurin-like phosphoesterase KSA16_006695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KSA16_006700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KSA16_006700 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSA16_006705 PF00117 Glutamine amidotransferase class-I KSA16_006705 PF02540 NAD synthase KSA16_006705 PF00958 GMP synthase C terminal domain KSA16_006710 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KSA16_006715 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KSA16_006720 PF13520 Amino acid permease KSA16_006725 PF00171 Aldehyde dehydrogenase family KSA16_006740 PF00465 Iron-containing alcohol dehydrogenase KSA16_006745 PF14493 Helix-turn-helix domain KSA16_006745 PF05970 PIF1-like helicase KSA16_006755 PF06445 GyrI-like small molecule binding domain KSA16_006760 PF02110 Hydroxyethylthiazole kinase family KSA16_006775 PF11940 Domain of unknown function (DUF3458) Ig-like fold KSA16_006775 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KSA16_006775 PF01433 Peptidase family M1 domain KSA16_006785 PF00106 short chain dehydrogenase KSA16_006795 PF01817 Chorismate mutase type II KSA16_006800 PF01037 Lrp/AsnC ligand binding domain KSA16_006815 PF00440 Bacterial regulatory proteins, tetR family KSA16_006820 PF07715 TonB-dependent Receptor Plug Domain KSA16_006820 PF00593 TonB dependent receptor KSA16_006825 PF00924 Mechanosensitive ion channel KSA16_006860 PF00593 TonB dependent receptor KSA16_006860 PF07715 TonB-dependent Receptor Plug Domain KSA16_006880 PF12848 ABC transporter KSA16_006880 PF00005 ABC transporter KSA16_006885 PF00582 Universal stress protein family KSA16_006910 PF00689 Cation transporting ATPase, C-terminus KSA16_006910 PF00690 Cation transporter/ATPase, N-terminus KSA16_006915 PF02308 MgtC family KSA16_006920 PF03594 Benzoate membrane transport protein KSA16_006925 PF01037 Lrp/AsnC ligand binding domain KSA16_006930 PF01810 LysE type translocator KSA16_006935 PF00923 Transaldolase/Fructose-6-phosphate aldolase KSA16_006940 PF03466 LysR substrate binding domain KSA16_006940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_006950 PF02803 Thiolase, C-terminal domain KSA16_006950 PF00108 Thiolase, N-terminal domain KSA16_006960 PF01575 MaoC like domain KSA16_006965 PF00144 Beta-lactamase KSA16_006975 PF07690 Major Facilitator Superfamily KSA16_006980 PF12169 DNA polymerase III subunits gamma and tau domain III KSA16_006980 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KSA16_006980 PF12170 DNA polymerase III tau subunit V interacting with alpha KSA16_006985 PF04185 Phosphoesterase family KSA16_006985 PF05506 Domain of unknown function (DUF756) KSA16_006990 PF03061 Thioesterase superfamily KSA16_006995 PF00465 Iron-containing alcohol dehydrogenase KSA16_007005 PF01451 Low molecular weight phosphotyrosine protein phosphatase KSA16_007010 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KSA16_007010 PF01565 FAD binding domain KSA16_007025 PF01645 Conserved region in glutamate synthase KSA16_007135 PF01555 DNA methylase KSA16_007320 PF01476 LysM domain KSA16_007320 PF08525 Opacity-associated protein A N-terminal motif KSA16_007320 PF01551 Peptidase family M23 KSA16_007415 PF12832 MFS_1 like family KSA16_007425 PF00289 Biotin carboxylase, N-terminal domain KSA16_007425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSA16_007425 PF02785 Biotin carboxylase C-terminal domain KSA16_007430 PF00364 Biotin-requiring enzyme KSA16_007435 PF01220 Dehydroquinase class II KSA16_007440 PF13438 Domain of unknown function (DUF4113) KSA16_007440 PF00817 impB/mucB/samB family KSA16_007440 PF11799 impB/mucB/samB family C-terminal domain KSA16_007450 PF00005 ABC transporter KSA16_007455 PF00072 Response regulator receiver domain KSA16_007455 PF00486 Transcriptional regulatory protein, C terminal KSA16_007465 PF04324 BFD-like [2Fe-2S] binding domain KSA16_007465 PF18267 Rubredoxin NAD+ reductase C-terminal domain KSA16_007465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KSA16_007465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KSA16_007465 PF13806 Rieske-like [2Fe-2S] domain KSA16_007465 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_007470 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_007470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KSA16_007470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KSA16_007470 PF04324 BFD-like [2Fe-2S] binding domain KSA16_007470 PF18267 Rubredoxin NAD+ reductase C-terminal domain KSA16_007475 PF00384 Molybdopterin oxidoreductase KSA16_007475 PF01568 Molydopterin dinucleotide binding domain KSA16_007475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSA16_007475 PF04324 BFD-like [2Fe-2S] binding domain KSA16_007480 PF12804 MobA-like NTP transferase domain KSA16_007485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSA16_007485 PF00384 Molybdopterin oxidoreductase KSA16_007485 PF01568 Molydopterin dinucleotide binding domain KSA16_007490 PF04055 Radical SAM superfamily KSA16_007490 PF06463 Molybdenum Cofactor Synthesis C KSA16_007500 PF02391 MoaE protein KSA16_007505 PF00994 Probable molybdopterin binding domain KSA16_007505 PF01967 MoaC family KSA16_007510 PF03454 MoeA C-terminal region (domain IV) KSA16_007510 PF03453 MoeA N-terminal region (domain I and II) KSA16_007510 PF00994 Probable molybdopterin binding domain KSA16_007515 PF01638 HxlR-like helix-turn-helix KSA16_007520 PF00392 Bacterial regulatory proteins, gntR family KSA16_007520 PF00155 Aminotransferase class I and II KSA16_007525 PF00892 EamA-like transporter family KSA16_007545 PF02635 DsrE/DsrF-like family KSA16_007550 PF16363 GDP-mannose 4,6 dehydratase KSA16_007555 PF10415 Fumarase C C-terminus KSA16_007555 PF00206 Lyase KSA16_007575 PF01266 FAD dependent oxidoreductase KSA16_007585 PF02542 YgbB family KSA16_007595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KSA16_007595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KSA16_007600 PF00440 Bacterial regulatory proteins, tetR family KSA16_007605 PF00158 Sigma-54 interaction domain KSA16_007605 PF00072 Response regulator receiver domain KSA16_007605 PF02954 Bacterial regulatory protein, Fis family KSA16_007610 PF00989 PAS fold KSA16_007610 PF00512 His Kinase A (phospho-acceptor) domain KSA16_007610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_007615 PF18693 TRAM domain KSA16_007615 PF00919 Uncharacterized protein family UPF0004 KSA16_007615 PF04055 Radical SAM superfamily KSA16_007620 PF00696 Amino acid kinase family KSA16_007625 PF01765 Ribosome recycling factor KSA16_007630 PF01255 Putative undecaprenyl diphosphate synthase KSA16_007640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KSA16_007640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KSA16_007640 PF13288 DXP reductoisomerase C-terminal domain KSA16_007645 PF13180 PDZ domain KSA16_007645 PF17820 PDZ domain KSA16_007645 PF02163 Peptidase family M50 KSA16_007650 PF01103 Surface antigen KSA16_007650 PF07244 Surface antigen variable number repeat KSA16_007660 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KSA16_007660 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_007665 PF07977 FabA-like domain KSA16_007670 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_007670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KSA16_007685 PF02631 RecX family KSA16_007690 PF00154 recA bacterial DNA recombination protein KSA16_007695 PF01479 S4 domain KSA16_007700 PF13419 Haloacid dehalogenase-like hydrolase KSA16_007725 PF01037 Lrp/AsnC ligand binding domain KSA16_007730 PF00266 Aminotransferase class-V KSA16_007735 PF00324 Amino acid permease KSA16_007750 PF00082 Subtilase family KSA16_007750 PF05922 Peptidase inhibitor I9 KSA16_007755 PF01740 STAS domain KSA16_007755 PF00916 Sulfate permease family KSA16_007760 PF02586 SOS response associated peptidase (SRAP) KSA16_007765 PF07995 Glucose / Sorbosone dehydrogenase KSA16_007775 PF03707 Bacterial signalling protein N terminal repeat KSA16_007775 PF00990 Diguanylate cyclase, GGDEF domain KSA16_007775 PF00563 EAL domain KSA16_007795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSA16_007795 PF02378 Phosphotransferase system, EIIC KSA16_007800 PF00294 pfkB family carbohydrate kinase KSA16_007805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSA16_007805 PF00391 PEP-utilising enzyme, mobile domain KSA16_007805 PF05524 PEP-utilising enzyme, N-terminal KSA16_007805 PF00381 PTS HPr component phosphorylation site KSA16_007805 PF02896 PEP-utilising enzyme, TIM barrel domain KSA16_007830 PF05525 Branched-chain amino acid transport protein KSA16_007835 PF00557 Metallopeptidase family M24 KSA16_007840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_007840 PF03466 LysR substrate binding domain KSA16_007850 PF00462 Glutaredoxin KSA16_007855 PF00202 Aminotransferase class-III KSA16_007860 PF00571 CBS domain KSA16_007860 PF00478 IMP dehydrogenase / GMP reductase domain KSA16_007885 PF00448 SRP54-type protein, GTPase domain KSA16_007885 PF02881 SRP54-type protein, helical bundle domain KSA16_007895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KSA16_007910 PF08173 Membrane bound YbgT-like protein KSA16_007915 PF02322 Cytochrome bd terminal oxidase subunit II KSA16_007920 PF01654 Cytochrome bd terminal oxidase subunit I KSA16_007935 PF07290 Protein of unknown function (DUF1449) KSA16_007945 PF00294 pfkB family carbohydrate kinase KSA16_007950 PF00593 TonB dependent receptor KSA16_007950 PF07715 TonB-dependent Receptor Plug Domain KSA16_007955 PF00675 Insulinase (Peptidase family M16) KSA16_007955 PF08367 Peptidase M16C associated KSA16_007955 PF05193 Peptidase M16 inactive domain KSA16_007960 PF02253 Phospholipase A1 KSA16_007965 PF02386 Cation transport protein KSA16_007970 PF02080 TrkA-C domain KSA16_007970 PF02254 TrkA-N domain KSA16_007975 PF00585 C-terminal regulatory domain of Threonine dehydratase KSA16_007975 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_007980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KSA16_007995 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSA16_007995 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSA16_008005 PF02617 ATP-dependent Clp protease adaptor protein ClpS KSA16_008010 PF10431 C-terminal, D2-small domain, of ClpB protein KSA16_008010 PF02861 Clp amino terminal domain, pathogenicity island component KSA16_008010 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_008010 PF17871 AAA lid domain KSA16_008010 PF07724 AAA domain (Cdc48 subfamily) KSA16_008015 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KSA16_008020 PF00793 DAHP synthetase I family KSA16_008035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_008035 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_008065 PF00117 Glutamine amidotransferase class-I KSA16_008065 PF06418 CTP synthase N-terminus KSA16_008070 PF00793 DAHP synthetase I family KSA16_008075 PF00113 Enolase, C-terminal TIM barrel domain KSA16_008075 PF03952 Enolase, N-terminal domain KSA16_008080 PF04239 Protein of unknown function (DUF421) KSA16_008085 PF04977 Septum formation initiator KSA16_008090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KSA16_008095 PF01144 Coenzyme A transferase KSA16_008100 PF01144 Coenzyme A transferase KSA16_008105 PF02803 Thiolase, C-terminal domain KSA16_008105 PF00108 Thiolase, N-terminal domain KSA16_008110 PF10397 Adenylosuccinate lyase C-terminus KSA16_008110 PF00206 Lyase KSA16_008115 PF00561 alpha/beta hydrolase fold KSA16_008120 PF07690 Major Facilitator Superfamily KSA16_008125 PF02627 Carboxymuconolactone decarboxylase family KSA16_008130 PF00775 Dioxygenase KSA16_008130 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KSA16_008135 PF00775 Dioxygenase KSA16_008140 PF01487 Type I 3-dehydroquinase KSA16_008145 PF05048 Periplasmic copper-binding protein (NosD) KSA16_008150 PF04966 Carbohydrate-selective porin, OprB family KSA16_008155 PF13360 PQQ-like domain KSA16_008155 PF01011 PQQ enzyme repeat KSA16_008165 PF04143 Sulphur transport KSA16_008175 PF00753 Metallo-beta-lactamase superfamily KSA16_008180 PF09339 IclR helix-turn-helix domain KSA16_008180 PF01614 Bacterial transcriptional regulator KSA16_008185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_008185 PF03466 LysR substrate binding domain KSA16_008190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_008190 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_008190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_008205 PF00106 short chain dehydrogenase KSA16_008215 PF07690 Major Facilitator Superfamily KSA16_008225 PF01425 Amidase KSA16_008230 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KSA16_008245 PF00355 Rieske [2Fe-2S] domain KSA16_008245 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KSA16_008260 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_008260 PF00175 Oxidoreductase NAD-binding domain KSA16_008265 PF01613 Flavin reductase like domain KSA16_008270 PF02311 AraC-like ligand binding domain KSA16_008270 PF12833 Helix-turn-helix domain KSA16_008275 PF01179 Copper amine oxidase, enzyme domain KSA16_008275 PF07833 Copper amine oxidase N-terminal domain KSA16_008275 PF02728 Copper amine oxidase, N3 domain KSA16_008275 PF02727 Copper amine oxidase, N2 domain KSA16_008285 PF00171 Aldehyde dehydrogenase family KSA16_008290 PF01804 Penicillin amidase KSA16_008295 PF12146 Serine aminopeptidase, S33 KSA16_008300 PF02803 Thiolase, C-terminal domain KSA16_008300 PF00108 Thiolase, N-terminal domain KSA16_008305 PF01144 Coenzyme A transferase KSA16_008310 PF01144 Coenzyme A transferase KSA16_008315 PF00775 Dioxygenase KSA16_008315 PF04444 Catechol dioxygenase N terminus KSA16_008320 PF02426 Muconolactone delta-isomerase KSA16_008325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KSA16_008325 PF13378 Enolase C-terminal domain-like KSA16_008330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_008330 PF03466 LysR substrate binding domain KSA16_008340 PF00392 Bacterial regulatory proteins, gntR family KSA16_008340 PF07729 FCD domain KSA16_008345 PF00920 Dehydratase family KSA16_008350 PF07690 Major Facilitator Superfamily KSA16_008360 PF00171 Aldehyde dehydrogenase family KSA16_008380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_008380 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_008380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_008390 PF00158 Sigma-54 interaction domain KSA16_008390 PF06506 Propionate catabolism activator KSA16_008390 PF02954 Bacterial regulatory protein, Fis family KSA16_008395 PF00501 AMP-binding enzyme KSA16_008395 PF13193 AMP-binding enzyme C-terminal domain KSA16_008400 PF04341 Protein of unknown function, DUF485 KSA16_008405 PF00474 Sodium:solute symporter family KSA16_008410 PF00107 Zinc-binding dehydrogenase KSA16_008410 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_008415 PF00171 Aldehyde dehydrogenase family KSA16_008425 PF00561 alpha/beta hydrolase fold KSA16_008430 PF00199 Catalase KSA16_008430 PF06628 Catalase-related immune-responsive KSA16_008445 PF07859 alpha/beta hydrolase fold KSA16_008450 PF01047 MarR family KSA16_008455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_008455 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_008460 PF00106 short chain dehydrogenase KSA16_008465 PF01872 RibD C-terminal domain KSA16_008470 PF09278 MerR, DNA binding KSA16_008470 PF00376 MerR family regulatory protein KSA16_008480 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_008490 PF12706 Beta-lactamase superfamily domain KSA16_008495 PF08359 YsiA-like protein, C-terminal region KSA16_008495 PF00440 Bacterial regulatory proteins, tetR family KSA16_008505 PF00857 Isochorismatase family KSA16_008510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_008510 PF03466 LysR substrate binding domain KSA16_008515 PF07995 Glucose / Sorbosone dehydrogenase KSA16_008520 PF02254 TrkA-N domain KSA16_008520 PF00999 Sodium/hydrogen exchanger family KSA16_008530 PF01546 Peptidase family M20/M25/M40 KSA16_008530 PF07687 Peptidase dimerisation domain KSA16_008540 PF17287 POTRA domain KSA16_008540 PF08479 POTRA domain, ShlB-type KSA16_008540 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KSA16_008545 PF13332 Hemagglutinin repeat KSA16_008545 PF13018 Extended Signal Peptide of Type V secretion system KSA16_008545 PF05860 haemagglutination activity domain KSA16_008545 PF04829 Pre-toxin domain with VENN motif KSA16_008560 PF07690 Major Facilitator Superfamily KSA16_008565 PF04909 Amidohydrolase KSA16_008575 PF00392 Bacterial regulatory proteins, gntR family KSA16_008575 PF07702 UTRA domain KSA16_008580 PF08450 SMP-30/Gluconolactonase/LRE-like region KSA16_008590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_008590 PF03466 LysR substrate binding domain KSA16_008610 PF07690 Major Facilitator Superfamily KSA16_008615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSA16_008615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSA16_008615 PF01842 ACT domain KSA16_008620 PF03737 Aldolase/RraA KSA16_008650 PF00529 HlyD membrane-fusion protein of T1SS KSA16_008650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_008665 PF00171 Aldehyde dehydrogenase family KSA16_008670 PF00920 Dehydratase family KSA16_008680 PF03466 LysR substrate binding domain KSA16_008680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_008685 PF01370 NAD dependent epimerase/dehydratase family KSA16_008690 PF07690 Major Facilitator Superfamily KSA16_008695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KSA16_008695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSA16_008700 PF12833 Helix-turn-helix domain KSA16_008700 PF06719 AraC-type transcriptional regulator N-terminus KSA16_008715 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_008715 PF00107 Zinc-binding dehydrogenase KSA16_008725 PF01032 FecCD transport family KSA16_008730 PF00005 ABC transporter KSA16_008750 PF14572 Phosphoribosyl synthetase-associated domain KSA16_008750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KSA16_008755 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KSA16_008830 PF00196 Bacterial regulatory proteins, luxR family KSA16_008835 PF01425 Amidase KSA16_008840 PF13533 Biotin-lipoyl like KSA16_008845 PF07690 Major Facilitator Superfamily KSA16_008870 PF01975 Survival protein SurE KSA16_008880 PF13291 ACT domain KSA16_008880 PF04607 Region found in RelA / SpoT proteins KSA16_008880 PF02824 TGS domain KSA16_008930 PF12146 Serine aminopeptidase, S33 KSA16_008935 PF12833 Helix-turn-helix domain KSA16_008935 PF02311 AraC-like ligand binding domain KSA16_008945 PF00512 His Kinase A (phospho-acceptor) domain KSA16_008945 PF16527 Two-component sensor protein CpxA, periplasmic domain KSA16_008945 PF00672 HAMP domain KSA16_008945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_008950 PF00072 Response regulator receiver domain KSA16_008950 PF00486 Transcriptional regulatory protein, C terminal KSA16_008955 PF00529 HlyD membrane-fusion protein of T1SS KSA16_008955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_008960 PF00873 AcrB/AcrD/AcrF family KSA16_008965 PF02321 Outer membrane efflux protein KSA16_008970 PF12146 Serine aminopeptidase, S33 KSA16_008990 PF01593 Flavin containing amine oxidoreductase KSA16_009005 PF01266 FAD dependent oxidoreductase KSA16_009025 PF16970 Type-1 fimbrial protein, A KSA16_009035 PF02753 Pili assembly chaperone PapD, C-terminal domain KSA16_009035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KSA16_009040 PF13953 PapC C-terminal domain KSA16_009040 PF13954 PapC N-terminal domain KSA16_009040 PF00577 Outer membrane usher protein KSA16_009045 PF00419 Fimbrial protein KSA16_009055 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_009055 PF00107 Zinc-binding dehydrogenase KSA16_009065 PF00199 Catalase KSA16_009080 PF13091 PLD-like domain KSA16_009100 PF01244 Membrane dipeptidase (Peptidase family M19) KSA16_009105 PF04055 Radical SAM superfamily KSA16_009105 PF13186 Iron-sulfur cluster-binding domain KSA16_009110 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KSA16_009115 PF03070 TENA/THI-4/PQQC family KSA16_009120 PF12706 Beta-lactamase superfamily domain KSA16_009125 PF08042 PqqA family KSA16_009130 PF13089 Polyphosphate kinase N-terminal domain KSA16_009130 PF17941 Polyphosphate kinase C-terminal domain 1 KSA16_009130 PF13090 Polyphosphate kinase C-terminal domain 2 KSA16_009130 PF02503 Polyphosphate kinase middle domain KSA16_009135 PF00149 Calcineurin-like phosphoesterase KSA16_009145 PF00857 Isochorismatase family KSA16_009145 PF00550 Phosphopantetheine attachment site KSA16_009150 PF00106 short chain dehydrogenase KSA16_009155 PF03459 TOBE domain KSA16_009155 PF00005 ABC transporter KSA16_009160 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_009170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_009170 PF03459 TOBE domain KSA16_009175 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KSA16_009175 PF00355 Rieske [2Fe-2S] domain KSA16_009180 PF00866 Ring hydroxylating beta subunit KSA16_009185 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_009185 PF00175 Oxidoreductase NAD-binding domain KSA16_009185 PF00970 Oxidoreductase FAD-binding domain KSA16_009190 PF14525 AraC-binding-like domain KSA16_009190 PF12833 Helix-turn-helix domain KSA16_009200 PF01613 Flavin reductase like domain KSA16_009215 PF01738 Dienelactone hydrolase family KSA16_009220 PF07690 Major Facilitator Superfamily KSA16_009225 PF06719 AraC-type transcriptional regulator N-terminus KSA16_009225 PF12833 Helix-turn-helix domain KSA16_009250 PF03466 LysR substrate binding domain KSA16_009250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_009255 PF01144 Coenzyme A transferase KSA16_009260 PF01144 Coenzyme A transferase KSA16_009265 PF02667 Short chain fatty acid transporter KSA16_009270 PF00108 Thiolase, N-terminal domain KSA16_009270 PF02803 Thiolase, C-terminal domain KSA16_009275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_009275 PF03466 LysR substrate binding domain KSA16_009280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_009280 PF03466 LysR substrate binding domain KSA16_009295 PF10415 Fumarase C C-terminus KSA16_009295 PF00206 Lyase KSA16_009300 PF00593 TonB dependent receptor KSA16_009300 PF07715 TonB-dependent Receptor Plug Domain KSA16_009305 PF00083 Sugar (and other) transporter KSA16_009320 PF00005 ABC transporter KSA16_009325 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_009330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KSA16_009345 PF07702 UTRA domain KSA16_009345 PF00392 Bacterial regulatory proteins, gntR family KSA16_009355 PF02525 Flavodoxin-like fold KSA16_009360 PF01638 HxlR-like helix-turn-helix KSA16_009365 PF12833 Helix-turn-helix domain KSA16_009365 PF06445 GyrI-like small molecule binding domain KSA16_009380 PF01925 Sulfite exporter TauE/SafE KSA16_009395 PF00753 Metallo-beta-lactamase superfamily KSA16_009395 PF04273 Putative phosphatase (DUF442) KSA16_009400 PF00158 Sigma-54 interaction domain KSA16_009400 PF00072 Response regulator receiver domain KSA16_009400 PF02954 Bacterial regulatory protein, Fis family KSA16_009405 PF01062 Bestrophin, RFP-TM, chloride channel KSA16_009410 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_009410 PF00107 Zinc-binding dehydrogenase KSA16_009415 PF00106 short chain dehydrogenase KSA16_009420 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_009420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSA16_009425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSA16_009425 PF00364 Biotin-requiring enzyme KSA16_009425 PF02817 e3 binding domain KSA16_009430 PF02780 Transketolase, C-terminal domain KSA16_009430 PF02779 Transketolase, pyrimidine binding domain KSA16_009435 PF00676 Dehydrogenase E1 component KSA16_009440 PF04055 Radical SAM superfamily KSA16_009455 PF00990 Diguanylate cyclase, GGDEF domain KSA16_009455 PF08448 PAS fold KSA16_009460 PF01264 Chorismate synthase KSA16_009465 PF05175 Methyltransferase small domain KSA16_009470 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_009480 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_009480 PF17862 AAA+ lid domain KSA16_009480 PF01434 Peptidase family M41 KSA16_009490 PF05166 YcgL domain KSA16_009510 PF01612 3'-5' exonuclease KSA16_009510 PF00570 HRDC domain KSA16_009515 PF13662 Toprim domain KSA16_009515 PF02132 RecR protein KSA16_009520 PF02575 YbaB/EbfC DNA-binding family KSA16_009530 PF01053 Cys/Met metabolism PLP-dependent enzyme KSA16_009535 PF00561 alpha/beta hydrolase fold KSA16_009540 PF08241 Methyltransferase domain KSA16_009570 PF01230 HIT domain KSA16_009605 PF00005 ABC transporter KSA16_009610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_009620 PF02684 Lipid-A-disaccharide synthetase KSA16_009625 PF00593 TonB dependent receptor KSA16_009625 PF07715 TonB-dependent Receptor Plug Domain KSA16_009640 PF00872 Transposase, Mutator family KSA16_009650 PF01925 Sulfite exporter TauE/SafE KSA16_009655 PF00793 DAHP synthetase I family KSA16_009660 PF02654 Cobalamin-5-phosphate synthase KSA16_009675 PF02277 Phosphoribosyltransferase KSA16_009680 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KSA16_009690 PF13419 Haloacid dehalogenase-like hydrolase KSA16_009715 PF07715 TonB-dependent Receptor Plug Domain KSA16_009715 PF00593 TonB dependent receptor KSA16_009730 PF06276 Ferric iron reductase FhuF-like transporter KSA16_009730 PF04183 IucA / IucC family KSA16_009735 PF04183 IucA / IucC family KSA16_009735 PF06276 Ferric iron reductase FhuF-like transporter KSA16_009740 PF07690 Major Facilitator Superfamily KSA16_009745 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KSA16_009750 PF06276 Ferric iron reductase FhuF-like transporter KSA16_009750 PF04183 IucA / IucC family KSA16_009755 PF04073 Aminoacyl-tRNA editing domain KSA16_009765 PF03109 ABC1 family KSA16_009770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_009770 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_009770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_009775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_009775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_009775 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_009780 PF00487 Fatty acid desaturase KSA16_009785 PF12852 Cupin KSA16_009785 PF12833 Helix-turn-helix domain KSA16_009790 PF00639 PPIC-type PPIASE domain KSA16_009790 PF09312 SurA N-terminal domain KSA16_009795 PF00216 Bacterial DNA-binding protein KSA16_009810 PF02082 Transcriptional regulator KSA16_009815 PF00266 Aminotransferase class-V KSA16_009820 PF01592 NifU-like N terminal domain KSA16_009825 PF01521 Iron-sulphur cluster biosynthesis KSA16_009830 PF07743 HSCB C-terminal oligomerisation domain KSA16_009830 PF00226 DnaJ domain KSA16_009835 PF00012 Hsp70 protein KSA16_009840 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_009845 PF00211 Adenylate and Guanylate cyclase catalytic domain KSA16_009855 PF00270 DEAD/DEAH box helicase KSA16_009855 PF00271 Helicase conserved C-terminal domain KSA16_009855 PF03461 TRCF domain KSA16_009855 PF17757 UvrB interaction domain KSA16_009855 PF02559 CarD-like/TRCF domain KSA16_009875 PF03737 Aldolase/RraA KSA16_009880 PF13460 NAD(P)H-binding KSA16_009885 PF01649 Ribosomal protein S20 KSA16_009895 PF00459 Inositol monophosphatase family KSA16_009910 PF00005 ABC transporter KSA16_009910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSA16_009915 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_009920 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_009925 PF01432 Peptidase family M3 KSA16_009945 PF00593 TonB dependent receptor KSA16_009945 PF07715 TonB-dependent Receptor Plug Domain KSA16_009955 PF01618 MotA/TolQ/ExbB proton channel family KSA16_009960 PF02472 Biopolymer transport protein ExbD/TolR KSA16_009965 PF02472 Biopolymer transport protein ExbD/TolR KSA16_009975 PF01274 Malate synthase KSA16_009980 PF03969 AFG1-like ATPase KSA16_009990 PF00743 Flavin-binding monooxygenase-like KSA16_010000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KSA16_010010 PF00216 Bacterial DNA-binding protein KSA16_010015 PF00575 S1 RNA binding domain KSA16_010020 PF02224 Cytidylate kinase KSA16_010030 PF14437 MafB19-like deaminase KSA16_010040 PF03167 Uracil DNA glycosylase superfamily KSA16_010050 PF03934 Type II secretion system (T2SS), protein K KSA16_010055 PF07963 Prokaryotic N-terminal methylation motif KSA16_010055 PF11612 Type II secretion system (T2SS), protein J KSA16_010060 PF07963 Prokaryotic N-terminal methylation motif KSA16_010060 PF02501 Type II secretion system (T2SS), protein I KSA16_010075 PF01026 TatD related DNase KSA16_010085 PF09115 DNA polymerase III, delta subunit, C terminal KSA16_010090 PF02348 Cytidylyltransferase KSA16_010095 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KSA16_010100 PF00005 ABC transporter KSA16_010100 PF00664 ABC transporter transmembrane region KSA16_010110 PF01618 MotA/TolQ/ExbB proton channel family KSA16_010115 PF02195 ParB-like nuclease domain KSA16_010115 PF17762 HTH domain found in ParB protein KSA16_010120 PF13614 AAA domain KSA16_010125 PF02527 rRNA small subunit methyltransferase G KSA16_010130 PF00483 Nucleotidyl transferase KSA16_010135 PF01636 Phosphotransferase enzyme family KSA16_010140 PF03968 OstA-like protein KSA16_010140 PF04453 LPS transport system D KSA16_010145 PF09312 SurA N-terminal domain KSA16_010145 PF00639 PPIC-type PPIASE domain KSA16_010150 PF01116 Fructose-bisphosphate aldolase class-II KSA16_010160 PF00162 Phosphoglycerate kinase KSA16_010170 PF02545 Maf-like protein KSA16_010175 PF08007 Cupin superfamily protein KSA16_010190 PF00375 Sodium:dicarboxylate symporter family KSA16_010195 PF06912 Protein of unknown function (DUF1275) KSA16_010200 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KSA16_010205 PF00005 ABC transporter KSA16_010205 PF00664 ABC transporter transmembrane region KSA16_010215 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KSA16_010215 PF12833 Helix-turn-helix domain KSA16_010220 PF01597 Glycine cleavage H-protein KSA16_010225 PF02146 Sir2 family KSA16_010230 PF00474 Sodium:solute symporter family KSA16_010235 PF01037 Lrp/AsnC ligand binding domain KSA16_010240 PF00171 Aldehyde dehydrogenase family KSA16_010240 PF01619 Proline dehydrogenase KSA16_010240 PF14850 DNA-binding domain of Proline dehydrogenase KSA16_010240 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KSA16_010245 PF04229 GrpB protein KSA16_010250 PF05958 tRNA (Uracil-5-)-methyltransferase KSA16_010260 PF09992 Phosphodiester glycosidase KSA16_010270 PF04264 YceI-like domain KSA16_010280 PF02779 Transketolase, pyrimidine binding domain KSA16_010280 PF00456 Transketolase, thiamine diphosphate binding domain KSA16_010280 PF02780 Transketolase, C-terminal domain KSA16_010285 PF00438 S-adenosylmethionine synthetase, N-terminal domain KSA16_010285 PF02773 S-adenosylmethionine synthetase, C-terminal domain KSA16_010285 PF02772 S-adenosylmethionine synthetase, central domain KSA16_010305 PF00905 Penicillin binding protein transpeptidase domain KSA16_010320 PF02075 Crossover junction endodeoxyribonuclease RuvC KSA16_010325 PF03853 YjeF-related protein N-terminus KSA16_010325 PF01256 Carbohydrate kinase KSA16_010330 PF08331 Domain of unknown function (DUF1730) KSA16_010335 PF04055 Radical SAM superfamily KSA16_010335 PF06968 Biotin and Thiamin Synthesis associated domain KSA16_010350 PF16970 Type-1 fimbrial protein, A KSA16_010355 PF02753 Pili assembly chaperone PapD, C-terminal domain KSA16_010355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KSA16_010360 PF13954 PapC N-terminal domain KSA16_010360 PF13953 PapC C-terminal domain KSA16_010360 PF00577 Outer membrane usher protein KSA16_010380 PF00892 EamA-like transporter family KSA16_010390 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KSA16_010400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010400 PF03466 LysR substrate binding domain KSA16_010420 PF00440 Bacterial regulatory proteins, tetR family KSA16_010430 PF01709 Transcriptional regulator KSA16_010435 PF01037 Lrp/AsnC ligand binding domain KSA16_010445 PF00005 ABC transporter KSA16_010450 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_010455 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_010470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_010470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KSA16_010480 PF00296 Luciferase-like monooxygenase KSA16_010485 PF03180 NLPA lipoprotein KSA16_010490 PF03180 NLPA lipoprotein KSA16_010495 PF00005 ABC transporter KSA16_010495 PF09383 NIL domain KSA16_010500 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_010505 PF01926 50S ribosome-binding GTPase KSA16_010505 PF06071 Protein of unknown function (DUF933) KSA16_010530 PF03591 AzlC protein KSA16_010535 PF05437 Branched-chain amino acid transport protein (AzlD) KSA16_010545 PF02222 ATP-grasp domain KSA16_010550 PF01909 Nucleotidyltransferase domain KSA16_010550 PF01966 HD domain KSA16_010550 PF08335 GlnD PII-uridylyltransferase KSA16_010555 PF00155 Aminotransferase class I and II KSA16_010565 PF12833 Helix-turn-helix domain KSA16_010565 PF12852 Cupin KSA16_010570 PF00255 Glutathione peroxidase KSA16_010575 PF01641 SelR domain KSA16_010580 PF00155 Aminotransferase class I and II KSA16_010585 PF00375 Sodium:dicarboxylate symporter family KSA16_010590 PF00710 Asparaginase, N-terminal KSA16_010590 PF17763 Glutaminase/Asparaginase C-terminal domain KSA16_010595 PF07733 Bacterial DNA polymerase III alpha NTPase domain KSA16_010595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KSA16_010595 PF14579 Helix-hairpin-helix motif KSA16_010595 PF02811 PHP domain KSA16_010595 PF01336 OB-fold nucleic acid binding domain KSA16_010600 PF00588 SpoU rRNA Methylase family KSA16_010605 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_010620 PF13192 Thioredoxin domain KSA16_010620 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_010635 PF03466 LysR substrate binding domain KSA16_010635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010640 PF01758 Sodium Bile acid symporter family KSA16_010645 PF01022 Bacterial regulatory protein, arsR family KSA16_010650 PF03960 ArsC family KSA16_010660 PF13382 Adenine deaminase C-terminal domain KSA16_010660 PF01979 Amidohydrolase family KSA16_010670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010670 PF03466 LysR substrate binding domain KSA16_010680 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KSA16_010685 PF01177 Asp/Glu/Hydantoin racemase KSA16_010690 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KSA16_010695 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_010700 PF00005 ABC transporter KSA16_010705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KSA16_010715 PF00083 Sugar (and other) transporter KSA16_010720 PF00296 Luciferase-like monooxygenase KSA16_010725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KSA16_010725 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_010725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_010735 PF01654 Cytochrome bd terminal oxidase subunit I KSA16_010740 PF02322 Cytochrome bd terminal oxidase subunit II KSA16_010750 PF00392 Bacterial regulatory proteins, gntR family KSA16_010750 PF00155 Aminotransferase class I and II KSA16_010755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010755 PF03466 LysR substrate binding domain KSA16_010770 PF00698 Acyl transferase domain KSA16_010775 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KSA16_010785 PF01039 Carboxyl transferase domain KSA16_010790 PF06857 Malonate decarboxylase delta subunit (MdcD) KSA16_010795 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KSA16_010800 PF16957 Malonate decarboxylase, alpha subunit, transporter KSA16_010805 PF07690 Major Facilitator Superfamily KSA16_010820 PF00392 Bacterial regulatory proteins, gntR family KSA16_010820 PF00155 Aminotransferase class I and II KSA16_010825 PF04172 LrgB-like family KSA16_010830 PF03788 LrgA family KSA16_010835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010835 PF03466 LysR substrate binding domain KSA16_010840 PF14834 Glutathione S-transferase, C-terminal domain KSA16_010840 PF02798 Glutathione S-transferase, N-terminal domain KSA16_010845 PF02798 Glutathione S-transferase, N-terminal domain KSA16_010850 PF03466 LysR substrate binding domain KSA16_010850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010860 PF00581 Rhodanese-like domain KSA16_010865 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_010875 PF00266 Aminotransferase class-V KSA16_010885 PF01810 LysE type translocator KSA16_010890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_010890 PF03466 LysR substrate binding domain KSA16_010900 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSA16_010905 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSA16_010910 PF00005 ABC transporter KSA16_010915 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_010920 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_010935 PF00072 Response regulator receiver domain KSA16_010940 PF00072 Response regulator receiver domain KSA16_010940 PF09308 LuxQ, periplasmic KSA16_010940 PF00512 His Kinase A (phospho-acceptor) domain KSA16_010940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_010950 PF01037 Lrp/AsnC ligand binding domain KSA16_010950 PF13404 AsnC-type helix-turn-helix domain KSA16_010960 PF00717 Peptidase S24-like KSA16_010985 PF00199 Catalase KSA16_010985 PF06628 Catalase-related immune-responsive KSA16_010985 PF18011 C-terminal domain found in long catalases KSA16_010995 PF02464 Competence-damaged protein KSA16_010995 PF18146 Damage-inducible protein CinA KH domain KSA16_010995 PF00994 Probable molybdopterin binding domain KSA16_011030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_011030 PF03466 LysR substrate binding domain KSA16_011060 PF13193 AMP-binding enzyme C-terminal domain KSA16_011060 PF00501 AMP-binding enzyme KSA16_011065 PF00440 Bacterial regulatory proteins, tetR family KSA16_011070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_011070 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_011070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_011075 PF01039 Carboxyl transferase domain KSA16_011080 PF00378 Enoyl-CoA hydratase/isomerase KSA16_011085 PF02785 Biotin carboxylase C-terminal domain KSA16_011085 PF00289 Biotin carboxylase, N-terminal domain KSA16_011085 PF00364 Biotin-requiring enzyme KSA16_011085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSA16_011085 PF18140 Propionyl-coenzyme A carboxylase BT domain KSA16_011090 PF00682 HMGL-like KSA16_011095 PF03466 LysR substrate binding domain KSA16_011095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_011110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_011110 PF12806 Acetyl-CoA dehydrogenase C-terminal like KSA16_011110 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_011110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_011120 PF07690 Major Facilitator Superfamily KSA16_011130 PF01144 Coenzyme A transferase KSA16_011135 PF01144 Coenzyme A transferase KSA16_011140 PF07690 Major Facilitator Superfamily KSA16_011145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_011145 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_011145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_011150 PF00378 Enoyl-CoA hydratase/isomerase KSA16_011160 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KSA16_011160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSA16_011160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSA16_011165 PF02803 Thiolase, C-terminal domain KSA16_011165 PF00108 Thiolase, N-terminal domain KSA16_011170 PF09339 IclR helix-turn-helix domain KSA16_011175 PF07690 Major Facilitator Superfamily KSA16_011180 PF03060 Nitronate monooxygenase KSA16_011185 PF00378 Enoyl-CoA hydratase/isomerase KSA16_011195 PF09339 IclR helix-turn-helix domain KSA16_011200 PF02515 CoA-transferase family III KSA16_011205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_011205 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_011205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_011210 PF07690 Major Facilitator Superfamily KSA16_011215 PF13419 Haloacid dehalogenase-like hydrolase KSA16_011220 PF00266 Aminotransferase class-V KSA16_011225 PF01266 FAD dependent oxidoreductase KSA16_011230 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_011235 PF00005 ABC transporter KSA16_011235 PF08402 TOBE domain KSA16_011245 PF00392 Bacterial regulatory proteins, gntR family KSA16_011245 PF07702 UTRA domain KSA16_011250 PF01494 FAD binding domain KSA16_011255 PF01614 Bacterial transcriptional regulator KSA16_011255 PF09339 IclR helix-turn-helix domain KSA16_011260 PF02525 Flavodoxin-like fold KSA16_011265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_011265 PF03466 LysR substrate binding domain KSA16_011270 PF02627 Carboxymuconolactone decarboxylase family KSA16_011275 PF00171 Aldehyde dehydrogenase family KSA16_011285 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KSA16_011295 PF00171 Aldehyde dehydrogenase family KSA16_011300 PF00296 Luciferase-like monooxygenase KSA16_011305 PF01613 Flavin reductase like domain KSA16_011310 PF12697 Alpha/beta hydrolase family KSA16_011330 PF01292 Prokaryotic cytochrome b561 KSA16_011335 PF00199 Catalase KSA16_011370 PF03061 Thioesterase superfamily KSA16_011375 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_011380 PF08223 PaaX-like protein C-terminal domain KSA16_011380 PF07848 PaaX-like protein KSA16_011385 PF14535 AMP-binding enzyme C-terminal domain KSA16_011385 PF00501 AMP-binding enzyme KSA16_011390 PF02803 Thiolase, C-terminal domain KSA16_011390 PF00108 Thiolase, N-terminal domain KSA16_011395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSA16_011395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSA16_011395 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KSA16_011400 PF00378 Enoyl-CoA hydratase/isomerase KSA16_011405 PF00378 Enoyl-CoA hydratase/isomerase KSA16_011410 PF00175 Oxidoreductase NAD-binding domain KSA16_011410 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_011410 PF00970 Oxidoreductase FAD-binding domain KSA16_011415 PF01883 Iron-sulfur cluster assembly protein KSA16_011420 PF05138 Phenylacetic acid catabolic protein KSA16_011425 PF06243 Phenylacetic acid degradation B KSA16_011430 PF05138 Phenylacetic acid catabolic protein KSA16_011435 PF01575 MaoC like domain KSA16_011435 PF00171 Aldehyde dehydrogenase family KSA16_011440 PF03313 Serine dehydratase alpha chain KSA16_011440 PF03315 Serine dehydratase beta chain KSA16_011445 PF13520 Amino acid permease KSA16_011450 PF00171 Aldehyde dehydrogenase family KSA16_011455 PF00083 Sugar (and other) transporter KSA16_011465 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_011465 PF04324 BFD-like [2Fe-2S] binding domain KSA16_011475 PF01266 FAD dependent oxidoreductase KSA16_011480 PF05544 Proline racemase KSA16_011485 PF00392 Bacterial regulatory proteins, gntR family KSA16_011495 PF00701 Dihydrodipicolinate synthetase family KSA16_011505 PF00376 MerR family regulatory protein KSA16_011505 PF09278 MerR, DNA binding KSA16_011520 PF02677 Epoxyqueuosine reductase QueH KSA16_011535 PF07690 Major Facilitator Superfamily KSA16_011540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSA16_011550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_011550 PF03466 LysR substrate binding domain KSA16_011570 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KSA16_011575 PF06812 ImpA, N-terminal, type VI secretion system KSA16_011580 PF10431 C-terminal, D2-small domain, of ClpB protein KSA16_011580 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_011580 PF17871 AAA lid domain KSA16_011580 PF07724 AAA domain (Cdc48 subfamily) KSA16_011595 PF00691 OmpA family KSA16_011595 PF01389 OmpA-like transmembrane domain KSA16_011605 PF06761 Intracellular multiplication and human macrophage-killing KSA16_011605 PF14331 ImcF-related N-terminal domain KSA16_011605 PF06744 Type VI secretion protein IcmF C-terminal KSA16_011620 PF05947 Type VI secretion system, TssF KSA16_011635 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KSA16_011660 PF00005 ABC transporter KSA16_011665 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSA16_011670 PF01425 Amidase KSA16_011675 PF08753 NikR C terminal nickel binding domain KSA16_011675 PF01402 Ribbon-helix-helix protein, copG family KSA16_011695 PF02525 Flavodoxin-like fold KSA16_011700 PF02785 Biotin carboxylase C-terminal domain KSA16_011700 PF00289 Biotin carboxylase, N-terminal domain KSA16_011700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSA16_011715 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_011715 PF13823 Alcohol dehydrogenase GroES-associated KSA16_011715 PF00107 Zinc-binding dehydrogenase KSA16_011725 PF00440 Bacterial regulatory proteins, tetR family KSA16_011745 PF00654 Voltage gated chloride channel KSA16_011750 PF00289 Biotin carboxylase, N-terminal domain KSA16_011750 PF02785 Biotin carboxylase C-terminal domain KSA16_011750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSA16_011750 PF00364 Biotin-requiring enzyme KSA16_011760 PF07286 Protein of unknown function (DUF1445) KSA16_011765 PF03746 LamB/YcsF family KSA16_011770 PF01566 Natural resistance-associated macrophage protein KSA16_011775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_011775 PF03466 LysR substrate binding domain KSA16_011790 PF03527 RHS protein KSA16_011790 PF05593 RHS Repeat KSA16_011795 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KSA16_011795 PF04717 Type VI secretion system, phage-baseplate injector KSA16_011795 PF13296 Putative type VI secretion system Rhs element Vgr KSA16_011805 PF13419 Haloacid dehalogenase-like hydrolase KSA16_011825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSA16_011825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSA16_011845 PF07690 Major Facilitator Superfamily KSA16_011860 PF03279 Bacterial lipid A biosynthesis acyltransferase KSA16_011865 PF00990 Diguanylate cyclase, GGDEF domain KSA16_011865 PF03707 Bacterial signalling protein N terminal repeat KSA16_011865 PF00563 EAL domain KSA16_011870 PF00892 EamA-like transporter family KSA16_011875 PF01037 Lrp/AsnC ligand binding domain KSA16_011880 PF05188 MutS domain II KSA16_011880 PF05192 MutS domain III KSA16_011880 PF05190 MutS family domain IV KSA16_011880 PF00488 MutS domain V KSA16_011880 PF01624 MutS domain I KSA16_011890 PF11953 Domain of unknown function (DUF3470) KSA16_011890 PF00037 4Fe-4S binding domain KSA16_011900 PF01596 O-methyltransferase KSA16_011910 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_011915 PF01205 Uncharacterized protein family UPF0029 KSA16_011925 PF03412 Peptidase C39 family KSA16_011925 PF00005 ABC transporter KSA16_011925 PF00664 ABC transporter transmembrane region KSA16_011930 PF02321 Outer membrane efflux protein KSA16_011935 PF12399 Branched-chain amino acid ATP-binding cassette transporter KSA16_011935 PF00005 ABC transporter KSA16_011940 PF03968 OstA-like protein KSA16_011955 PF00571 CBS domain KSA16_011955 PF01380 SIS domain KSA16_011960 PF09190 DALR domain KSA16_011960 PF01406 tRNA synthetases class I (C) catalytic domain KSA16_011985 PF01638 HxlR-like helix-turn-helix KSA16_011990 PF07690 Major Facilitator Superfamily KSA16_012015 PF03807 NADP oxidoreductase coenzyme F420-dependent KSA16_012015 PF14748 Pyrroline-5-carboxylate reductase dimerisation KSA16_012025 PF00313 'Cold-shock' DNA-binding domain KSA16_012030 PF01810 LysE type translocator KSA16_012060 PF13742 OB-fold nucleic acid binding domain KSA16_012060 PF02601 Exonuclease VII, large subunit KSA16_012095 PF09278 MerR, DNA binding KSA16_012095 PF00376 MerR family regulatory protein KSA16_012100 PF00403 Heavy-metal-associated domain KSA16_012105 PF00403 Heavy-metal-associated domain KSA16_012110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_012110 PF03466 LysR substrate binding domain KSA16_012120 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KSA16_012120 PF00355 Rieske [2Fe-2S] domain KSA16_012125 PF00866 Ring hydroxylating beta subunit KSA16_012130 PF00970 Oxidoreductase FAD-binding domain KSA16_012130 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_012130 PF00175 Oxidoreductase NAD-binding domain KSA16_012135 PF00106 short chain dehydrogenase KSA16_012140 PF03594 Benzoate membrane transport protein KSA16_012145 PF07690 Major Facilitator Superfamily KSA16_012155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KSA16_012155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KSA16_012160 PF00270 DEAD/DEAH box helicase KSA16_012160 PF04408 Helicase associated domain (HA2) KSA16_012160 PF00271 Helicase conserved C-terminal domain KSA16_012160 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KSA16_012160 PF11898 Domain of unknown function (DUF3418) KSA16_012165 PF10417 C-terminal domain of 1-Cys peroxiredoxin KSA16_012165 PF00578 AhpC/TSA family KSA16_012185 PF13192 Thioredoxin domain KSA16_012185 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_012195 PF00043 Glutathione S-transferase, C-terminal domain KSA16_012195 PF02798 Glutathione S-transferase, N-terminal domain KSA16_012205 PF02390 Putative methyltransferase KSA16_012210 PF13417 Glutathione S-transferase, N-terminal domain KSA16_012210 PF00043 Glutathione S-transferase, C-terminal domain KSA16_012220 PF00691 OmpA family KSA16_012220 PF13488 Glycine zipper KSA16_012225 PF01979 Amidohydrolase family KSA16_012230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KSA16_012230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KSA16_012240 PF01170 Putative RNA methylase family UPF0020 KSA16_012240 PF02926 THUMP domain KSA16_012240 PF10672 S-adenosylmethionine-dependent methyltransferase KSA16_012255 PF07724 AAA domain (Cdc48 subfamily) KSA16_012255 PF17871 AAA lid domain KSA16_012255 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_012255 PF10431 C-terminal, D2-small domain, of ClpB protein KSA16_012255 PF02861 Clp amino terminal domain, pathogenicity island component KSA16_012270 PF02566 OsmC-like protein KSA16_012280 PF13545 Crp-like helix-turn-helix domain KSA16_012280 PF00027 Cyclic nucleotide-binding domain KSA16_012290 PF00248 Aldo/keto reductase family KSA16_012305 PF00709 Adenylosuccinate synthetase KSA16_012310 PF13393 Histidyl-tRNA synthetase KSA16_012315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSA16_012315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSA16_012320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KSA16_012320 PF01411 tRNA synthetases class II (A) KSA16_012320 PF02272 DHHA1 domain KSA16_012325 PF13840 ACT domain KSA16_012325 PF01842 ACT domain KSA16_012325 PF00696 Amino acid kinase family KSA16_012330 PF13610 DDE domain KSA16_012340 PF01351 Ribonuclease HII KSA16_012345 PF02599 Global regulator protein family KSA16_012350 PF13610 DDE domain KSA16_012360 PF00239 Resolvase, N terminal domain KSA16_012360 PF02796 Helix-turn-helix domain of resolvase KSA16_012365 PF11809 Domain of unknown function (DUF3330) KSA16_012365 PF00563 EAL domain KSA16_012375 PF13495 Phage integrase, N-terminal SAM-like domain KSA16_012375 PF00589 Phage integrase family KSA16_012430 PF01636 Phosphotransferase enzyme family KSA16_012450 PF00239 Resolvase, N terminal domain KSA16_012450 PF02796 Helix-turn-helix domain of resolvase KSA16_012460 PF13610 DDE domain KSA16_012470 PF00239 Resolvase, N terminal domain KSA16_012470 PF02796 Helix-turn-helix domain of resolvase KSA16_012475 PF13610 DDE domain KSA16_012485 PF04958 Arginine N-succinyltransferase beta subunit KSA16_012490 PF00202 Aminotransferase class-III KSA16_012500 PF00171 Aldehyde dehydrogenase family KSA16_012510 PF07729 FCD domain KSA16_012510 PF00392 Bacterial regulatory proteins, gntR family KSA16_012520 PF00324 Amino acid permease KSA16_012525 PF01266 FAD dependent oxidoreductase KSA16_012530 PF00324 Amino acid permease KSA16_012570 PF03527 RHS protein KSA16_012570 PF05593 RHS Repeat KSA16_012575 PF13296 Putative type VI secretion system Rhs element Vgr KSA16_012575 PF04717 Type VI secretion system, phage-baseplate injector KSA16_012575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KSA16_012595 PF03180 NLPA lipoprotein KSA16_012600 PF05987 Bacterial protein of unknown function (DUF898) KSA16_012615 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_012615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_012620 PF00764 Arginosuccinate synthase KSA16_012625 PF01590 GAF domain KSA16_012625 PF00990 Diguanylate cyclase, GGDEF domain KSA16_012625 PF00360 Phytochrome region KSA16_012625 PF00563 EAL domain KSA16_012630 PF01979 Amidohydrolase family KSA16_012635 PF00929 Exonuclease KSA16_012645 PF07715 TonB-dependent Receptor Plug Domain KSA16_012645 PF00593 TonB dependent receptor KSA16_012650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_012650 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_012655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSA16_012655 PF00005 ABC transporter KSA16_012660 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_012660 PF12911 N-terminal TM domain of oligopeptide transport permease C KSA16_012665 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_012670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSA16_012675 PF01476 LysM domain KSA16_012675 PF01464 Transglycosylase SLT domain KSA16_012675 PF01464 Transglycosylase SLT domain KSA16_012675 PF01476 LysM domain KSA16_012680 PF00929 Exonuclease KSA16_012690 PF00293 NUDIX domain KSA16_012690 PF09297 NADH pyrophosphatase zinc ribbon domain KSA16_012700 PF04972 BON domain KSA16_012705 PF02021 Uncharacterised protein family UPF0102 KSA16_012710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSA16_012720 PF03466 LysR substrate binding domain KSA16_012720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_012725 PF01810 LysE type translocator KSA16_012735 PF13411 MerR HTH family regulatory protein KSA16_012745 PF01494 FAD binding domain KSA16_012750 PF01494 FAD binding domain KSA16_012755 PF05195 Aminopeptidase P, N-terminal domain KSA16_012755 PF00557 Metallopeptidase family M24 KSA16_012795 PF08019 Phosphoethanolamine transferase EptA/EptB KSA16_012795 PF00884 Sulfatase KSA16_012840 PF08525 Opacity-associated protein A N-terminal motif KSA16_012840 PF01551 Peptidase family M23 KSA16_012840 PF01476 LysM domain KSA16_013165 PF01812 5-formyltetrahydrofolate cyclo-ligase family KSA16_013170 PF00691 OmpA family KSA16_013170 PF04355 SmpA / OmlA family KSA16_013175 PF05662 Coiled stalk of trimeric autotransporter adhesin KSA16_013175 PF05658 Head domain of trimeric autotransporter adhesin KSA16_013175 PF03895 YadA-like membrane anchor domain KSA16_013175 PF13018 Extended Signal Peptide of Type V secretion system KSA16_013180 PF00004 ATPase family associated with various cellular activities (AAA) KSA16_013180 PF05362 Lon protease (S16) C-terminal proteolytic domain KSA16_013180 PF02190 ATP-dependent protease La (LON) substrate-binding domain KSA16_013185 PF02590 Predicted SPOUT methyltransferase KSA16_013190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KSA16_013200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSA16_013200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KSA16_013205 PF04060 Putative Fe-S cluster KSA16_013210 PF10576 Iron-sulfur binding domain of endonuclease III KSA16_013210 PF00633 Helix-hairpin-helix motif KSA16_013210 PF00730 HhH-GPD superfamily base excision DNA repair protein KSA16_013220 PF05191 Adenylate kinase, active site lid KSA16_013235 PF03717 Penicillin-binding Protein dimerisation domain KSA16_013235 PF00905 Penicillin binding protein transpeptidase domain KSA16_013250 PF02492 CobW/HypB/UreG, nucleotide-binding domain KSA16_013255 PF01730 UreF KSA16_013260 PF02814 UreE urease accessory protein, N-terminal domain KSA16_013260 PF05194 UreE urease accessory protein, C-terminal domain KSA16_013265 PF00449 Urease alpha-subunit, N-terminal domain KSA16_013265 PF01979 Amidohydrolase family KSA16_013270 PF00699 Urease beta subunit KSA16_013275 PF00547 Urease, gamma subunit KSA16_013280 PF01774 UreD urease accessory protein KSA16_013295 PF00463 Isocitrate lyase family KSA16_013300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_013300 PF03466 LysR substrate binding domain KSA16_013305 PF00571 CBS domain KSA16_013305 PF03471 Transporter associated domain KSA16_013305 PF01595 Cyclin M transmembrane N-terminal domain KSA16_013310 PF03600 Citrate transporter KSA16_013325 PF00009 Elongation factor Tu GTP binding domain KSA16_013330 PF01507 Phosphoadenosine phosphosulfate reductase family KSA16_013340 PF14052 Capsule assembly protein Wzi KSA16_013345 PF01336 OB-fold nucleic acid binding domain KSA16_013345 PF00152 tRNA synthetases class II (D, K and N) KSA16_013360 PF00301 Rubredoxin KSA16_013365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_013365 PF18113 Rubredoxin binding C-terminal domain KSA16_013370 PF00561 alpha/beta hydrolase fold KSA16_013375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_013375 PF03466 LysR substrate binding domain KSA16_013385 PF02503 Polyphosphate kinase middle domain KSA16_013385 PF13090 Polyphosphate kinase C-terminal domain 2 KSA16_013385 PF17941 Polyphosphate kinase C-terminal domain 1 KSA16_013385 PF13089 Polyphosphate kinase N-terminal domain KSA16_013390 PF00912 Transglycosylase KSA16_013395 PF01694 Rhomboid family KSA16_013405 PF00005 ABC transporter KSA16_013410 PF13472 GDSL-like Lipase/Acylhydrolase family KSA16_013415 PF00484 Carbonic anhydrase KSA16_013420 PF00561 alpha/beta hydrolase fold KSA16_013430 PF07715 TonB-dependent Receptor Plug Domain KSA16_013430 PF00593 TonB dependent receptor KSA16_013435 PF01521 Iron-sulphur cluster biosynthesis KSA16_013435 PF01106 NifU-like domain KSA16_013445 PF00884 Sulfatase KSA16_013450 PF03781 Sulfatase-modifying factor enzyme 1 KSA16_013465 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_013470 PF01384 Phosphate transporter family KSA16_013475 PF02574 Homocysteine S-methyltransferase KSA16_013475 PF00809 Pterin binding enzyme KSA16_013475 PF02965 Vitamin B12 dependent methionine synthase, activation domain KSA16_013475 PF02310 B12 binding domain KSA16_013475 PF02607 B12 binding domain KSA16_013480 PF02779 Transketolase, pyrimidine binding domain KSA16_013480 PF02780 Transketolase, C-terminal domain KSA16_013485 PF00456 Transketolase, thiamine diphosphate binding domain KSA16_013490 PF07690 Major Facilitator Superfamily KSA16_013500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_013500 PF03466 LysR substrate binding domain KSA16_013510 PF01263 Aldose 1-epimerase KSA16_013515 PF07690 Major Facilitator Superfamily KSA16_013520 PF12833 Helix-turn-helix domain KSA16_013520 PF02311 AraC-like ligand binding domain KSA16_013525 PF04960 Glutaminase KSA16_013530 PF01327 Polypeptide deformylase KSA16_013535 PF07690 Major Facilitator Superfamily KSA16_013545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSA16_013545 PF00205 Thiamine pyrophosphate enzyme, central domain KSA16_013545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSA16_013550 PF00171 Aldehyde dehydrogenase family KSA16_013555 PF01958 Domain of unknown function DUF108 KSA16_013555 PF03447 Homoserine dehydrogenase, NAD binding domain KSA16_013565 PF12697 Alpha/beta hydrolase family KSA16_013575 PF07690 Major Facilitator Superfamily KSA16_013580 PF14759 Reductase C-terminal KSA16_013580 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_013585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSA16_013595 PF00355 Rieske [2Fe-2S] domain KSA16_013605 PF00355 Rieske [2Fe-2S] domain KSA16_013610 PF09339 IclR helix-turn-helix domain KSA16_013610 PF01614 Bacterial transcriptional regulator KSA16_013625 PF00378 Enoyl-CoA hydratase/isomerase KSA16_013635 PF00535 Glycosyl transferase family 2 KSA16_013640 PF01522 Polysaccharide deacetylase KSA16_013640 PF14883 Hypothetical glycosyl hydrolase family 13 KSA16_013645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSA16_013650 PF07152 YaeQ protein KSA16_013655 PF00375 Sodium:dicarboxylate symporter family KSA16_013660 PF02492 CobW/HypB/UreG, nucleotide-binding domain KSA16_013660 PF07683 Cobalamin synthesis protein cobW C-terminal domain KSA16_013675 PF03061 Thioesterase superfamily KSA16_013685 PF02028 BCCT, betaine/carnitine/choline family transporter KSA16_013690 PF02028 BCCT, betaine/carnitine/choline family transporter KSA16_013695 PF13977 BetI-type transcriptional repressor, C-terminal KSA16_013695 PF00440 Bacterial regulatory proteins, tetR family KSA16_013700 PF00171 Aldehyde dehydrogenase family KSA16_013705 PF05199 GMC oxidoreductase KSA16_013705 PF00732 GMC oxidoreductase KSA16_013710 PF06039 Malate:quinone oxidoreductase (Mqo) KSA16_013720 PF02574 Homocysteine S-methyltransferase KSA16_013725 PF13520 Amino acid permease KSA16_013750 PF00701 Dihydrodipicolinate synthetase family KSA16_013755 PF00083 Sugar (and other) transporter KSA16_013825 PF10544 T5orf172 domain KSA16_013830 PF13614 AAA domain KSA16_013850 PF00905 Penicillin binding protein transpeptidase domain KSA16_013930 PF02768 DNA polymerase III beta subunit, C-terminal domain KSA16_013930 PF00712 DNA polymerase III beta subunit, N-terminal domain KSA16_013930 PF02767 DNA polymerase III beta subunit, central domain KSA16_013970 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KSA16_014120 PF07007 Lysozyme inhibitor LprI KSA16_014165 PF01695 IstB-like ATP binding protein KSA16_014175 PF00145 C-5 cytosine-specific DNA methylase KSA16_014220 PF01381 Helix-turn-helix KSA16_014220 PF00717 Peptidase S24-like KSA16_014255 PF00929 Exonuclease KSA16_014330 PF07690 Major Facilitator Superfamily KSA16_014335 PF13533 Biotin-lipoyl like KSA16_014340 PF03061 Thioesterase superfamily KSA16_014345 PF00490 Delta-aminolevulinic acid dehydratase KSA16_014350 PF01266 FAD dependent oxidoreductase KSA16_014355 PF08338 Domain of unknown function (DUF1731) KSA16_014355 PF01370 NAD dependent epimerase/dehydratase family KSA16_014375 PF00149 Calcineurin-like phosphoesterase KSA16_014375 PF12320 Type 5 capsule protein repressor C-terminal domain KSA16_014385 PF01168 Alanine racemase, N-terminal domain KSA16_014390 PF00437 Type II/IV secretion system protein KSA16_014395 PF00437 Type II/IV secretion system protein KSA16_014400 PF01475 Ferric uptake regulator family KSA16_014405 PF04355 SmpA / OmlA family KSA16_014410 PF03658 RnfH family Ubiquitin KSA16_014420 PF01814 Hemerythrin HHE cation binding domain KSA16_014425 PF13230 Glutamine amidotransferases class-II KSA16_014435 PF00696 Amino acid kinase family KSA16_014440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSA16_014440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSA16_014440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSA16_014440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSA16_014445 PF00692 dUTPase KSA16_014450 PF00580 UvrD/REP helicase N-terminal domain KSA16_014450 PF13361 UvrD-like helicase C-terminal domain KSA16_014455 PF00691 OmpA family KSA16_014455 PF13488 Glycine zipper KSA16_014460 PF01553 Acyltransferase KSA16_014470 PF03775 Septum formation inhibitor MinC, C-terminal domain KSA16_014475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KSA16_014480 PF03776 Septum formation topological specificity factor MinE KSA16_014495 PF01810 LysE type translocator KSA16_014500 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KSA16_014500 PF17854 FtsK alpha domain KSA16_014500 PF09397 Ftsk gamma domain KSA16_014500 PF01580 FtsK/SpoIIIE family KSA16_014505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSA16_014510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KSA16_014515 PF04377 Arginine-tRNA-protein transferase, C terminus KSA16_014515 PF04376 Arginine-tRNA-protein transferase, N terminus KSA16_014520 PF00583 Acetyltransferase (GNAT) family KSA16_014535 PF00009 Elongation factor Tu GTP binding domain KSA16_014535 PF03144 Elongation factor Tu domain 2 KSA16_014535 PF03143 Elongation factor Tu C-terminal domain KSA16_014540 PF00009 Elongation factor Tu GTP binding domain KSA16_014540 PF03144 Elongation factor Tu domain 2 KSA16_014540 PF14492 Elongation Factor G, domain II KSA16_014540 PF00679 Elongation factor G C-terminus KSA16_014540 PF03764 Elongation factor G, domain IV KSA16_014545 PF00177 Ribosomal protein S7p/S5e KSA16_014550 PF00164 Ribosomal protein S12/S23 KSA16_014560 PF00109 Beta-ketoacyl synthase, N-terminal domain KSA16_014560 PF02801 Beta-ketoacyl synthase, C-terminal domain KSA16_014565 PF03653 Uncharacterised protein family (UPF0093) KSA16_014570 PF05726 Pirin C-terminal cupin domain KSA16_014570 PF02678 Pirin KSA16_014580 PF00795 Carbon-nitrogen hydrolase KSA16_014580 PF02540 NAD synthase KSA16_014595 PF00175 Oxidoreductase NAD-binding domain KSA16_014595 PF00970 Oxidoreductase FAD-binding domain KSA16_014595 PF00111 2Fe-2S iron-sulfur cluster binding domain KSA16_014600 PF00171 Aldehyde dehydrogenase family KSA16_014605 PF00355 Rieske [2Fe-2S] domain KSA16_014605 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KSA16_014610 PF07859 alpha/beta hydrolase fold KSA16_014615 PF02028 BCCT, betaine/carnitine/choline family transporter KSA16_014620 PF00180 Isocitrate/isopropylmalate dehydrogenase KSA16_014625 PF03466 LysR substrate binding domain KSA16_014625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_014645 PF00037 4Fe-4S binding domain KSA16_014650 PF01467 Cytidylyltransferase-like KSA16_014655 PF01668 SmpB protein KSA16_014660 PF03358 NADPH-dependent FMN reductase KSA16_014665 PF02578 Multi-copper polyphenol oxidoreductase laccase KSA16_014670 PF00849 RNA pseudouridylate synthase KSA16_014670 PF01479 S4 domain KSA16_014675 PF13525 Outer membrane lipoprotein KSA16_014680 PF10410 DnaB-helicase binding domain of primase KSA16_014680 PF08278 DNA primase DnaG DnaB-binding KSA16_014680 PF01807 CHC2 zinc finger KSA16_014680 PF08275 DNA primase catalytic core, N-terminal domain KSA16_014685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KSA16_014685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KSA16_014685 PF01488 Shikimate / quinate 5-dehydrogenase KSA16_014695 PF03550 Outer membrane lipoprotein LolB KSA16_014700 PF00288 GHMP kinases N terminal domain KSA16_014700 PF08544 GHMP kinases C terminal KSA16_014725 PF14572 Phosphoribosyl synthetase-associated domain KSA16_014725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KSA16_014730 PF01386 Ribosomal L25p family KSA16_014735 PF01195 Peptidyl-tRNA hydrolase KSA16_014740 PF02261 Aspartate decarboxylase KSA16_014755 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KSA16_014765 PF02581 Thiamine monophosphate synthase KSA16_014765 PF03070 TENA/THI-4/PQQC family KSA16_014765 PF08543 Phosphomethylpyrimidine kinase KSA16_014770 PF04972 BON domain KSA16_014770 PF01476 LysM domain KSA16_014775 PF00550 Phosphopantetheine attachment site KSA16_014785 PF00698 Acyl transferase domain KSA16_014790 PF01783 Ribosomal L32p protein family KSA16_014795 PF02620 Large ribosomal RNA subunit accumulation protein YceD KSA16_014800 PF04315 Elongation factor P hydroxylase KSA16_014805 PF01300 Telomere recombination KSA16_014810 PF02616 Segregation and condensation protein ScpA KSA16_014815 PF04079 Segregation and condensation complex subunit ScpB KSA16_014820 PF00849 RNA pseudouridylate synthase KSA16_014820 PF01479 S4 domain KSA16_014835 PF00155 Aminotransferase class I and II KSA16_014840 PF00202 Aminotransferase class-III KSA16_014840 PF06968 Biotin and Thiamin Synthesis associated domain KSA16_014840 PF04055 Radical SAM superfamily KSA16_014845 PF12697 Alpha/beta hydrolase family KSA16_014845 PF08241 Methyltransferase domain KSA16_014850 PF02358 Trehalose-phosphatase KSA16_014855 PF00982 Glycosyltransferase family 20 KSA16_014860 PF07690 Major Facilitator Superfamily KSA16_014865 PF00210 Ferritin-like domain KSA16_014870 PF00533 BRCA1 C Terminus (BRCT) domain KSA16_014870 PF01653 NAD-dependent DNA ligase adenylation domain KSA16_014870 PF03120 NAD-dependent DNA ligase OB-fold domain KSA16_014870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KSA16_014870 PF12826 Helix-hairpin-helix motif KSA16_014880 PF06470 SMC proteins Flexible Hinge Domain KSA16_014880 PF02463 RecF/RecN/SMC N terminal domain KSA16_014890 PF01925 Sulfite exporter TauE/SafE KSA16_014900 PF03309 Type III pantothenate kinase KSA16_014905 PF02881 SRP54-type protein, helical bundle domain KSA16_014905 PF02978 Signal peptide binding domain KSA16_014905 PF00448 SRP54-type protein, GTPase domain KSA16_014915 PF01207 Dihydrouridine synthase (Dus) KSA16_014955 PF00692 dUTPase KSA16_014970 PF01048 Phosphorylase superfamily KSA16_014975 PF10609 NUBPL iron-transfer P-loop NTPase KSA16_014985 PF01588 Putative tRNA binding domain KSA16_014985 PF09334 tRNA synthetases class I (M) KSA16_015010 PF13533 Biotin-lipoyl like KSA16_015015 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_015030 PF05552 Conserved TM helix KSA16_015045 PF00970 Oxidoreductase FAD-binding domain KSA16_015045 PF00175 Oxidoreductase NAD-binding domain KSA16_015050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_015050 PF03466 LysR substrate binding domain KSA16_015055 PF00313 'Cold-shock' DNA-binding domain KSA16_015065 PF00361 Proton-conducting membrane transporter KSA16_015070 PF00361 Proton-conducting membrane transporter KSA16_015075 PF00361 Proton-conducting membrane transporter KSA16_015075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KSA16_015080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KSA16_015085 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KSA16_015090 PF12838 4Fe-4S dicluster domain KSA16_015095 PF00146 NADH dehydrogenase KSA16_015100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSA16_015100 PF00384 Molybdopterin oxidoreductase KSA16_015100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSA16_015105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KSA16_015105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KSA16_015105 PF10531 SLBB domain KSA16_015115 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KSA16_015115 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KSA16_015120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KSA16_015125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KSA16_015130 PF00990 Diguanylate cyclase, GGDEF domain KSA16_015130 PF17151 Periplasmic sensor domain KSA16_015140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_015140 PF00672 HAMP domain KSA16_015140 PF00512 His Kinase A (phospho-acceptor) domain KSA16_015145 PF00486 Transcriptional regulatory protein, C terminal KSA16_015145 PF00072 Response regulator receiver domain KSA16_015155 PF02867 Ribonucleotide reductase, barrel domain KSA16_015155 PF03477 ATP cone domain KSA16_015155 PF00317 Ribonucleotide reductase, all-alpha domain KSA16_015165 PF00268 Ribonucleotide reductase, small chain KSA16_015175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_015175 PF13755 Sensor N-terminal transmembrane domain KSA16_015175 PF13756 Stimulus-sensing domain KSA16_015175 PF00672 HAMP domain KSA16_015175 PF00512 His Kinase A (phospho-acceptor) domain KSA16_015245 PF01011 PQQ enzyme repeat KSA16_015245 PF13360 PQQ-like domain KSA16_015270 PF02567 Phenazine biosynthesis-like protein KSA16_015295 PF01613 Flavin reductase like domain KSA16_015300 PF08267 Cobalamin-independent synthase, N-terminal domain KSA16_015300 PF01717 Cobalamin-independent synthase, Catalytic domain KSA16_015310 PF03466 LysR substrate binding domain KSA16_015310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_015315 PF01810 LysE type translocator KSA16_015325 PF12833 Helix-turn-helix domain KSA16_015325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KSA16_015330 PF07687 Peptidase dimerisation domain KSA16_015330 PF01546 Peptidase family M20/M25/M40 KSA16_015340 PF03466 LysR substrate binding domain KSA16_015340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_015345 PF07690 Major Facilitator Superfamily KSA16_015355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_015355 PF03466 LysR substrate binding domain KSA16_015360 PF14537 Cytochrome c3 KSA16_015360 PF00890 FAD binding domain KSA16_015370 PF02515 CoA-transferase family III KSA16_015375 PF07690 Major Facilitator Superfamily KSA16_015380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_015380 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_015380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_015385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_015385 PF03466 LysR substrate binding domain KSA16_015390 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_015390 PF00107 Zinc-binding dehydrogenase KSA16_015395 PF00962 Adenosine/AMP deaminase KSA16_015420 PF02445 Quinolinate synthetase A protein KSA16_015425 PF01960 ArgJ family KSA16_015430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KSA16_015430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSA16_015435 PF00893 Small Multidrug Resistance protein KSA16_015445 PF05275 Copper resistance protein B precursor (CopB) KSA16_015450 PF07732 Multicopper oxidase KSA16_015450 PF00394 Multicopper oxidase KSA16_015450 PF07731 Multicopper oxidase KSA16_015465 PF00834 Ribulose-phosphate 3 epimerase family KSA16_015475 PF00756 Putative esterase KSA16_015485 PF04445 Putative SAM-dependent methyltransferase KSA16_015490 PF00814 Glycoprotease family KSA16_015495 PF00132 Bacterial transferase hexapeptide (six repeats) KSA16_015500 PF00293 NUDIX domain KSA16_015540 PF00425 chorismate binding enzyme KSA16_015540 PF04715 Anthranilate synthase component I, N terminal region KSA16_015545 PF00155 Aminotransferase class I and II KSA16_015550 PF00815 Histidinol dehydrogenase KSA16_015555 PF01634 ATP phosphoribosyltransferase KSA16_015560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSA16_015565 PF01722 BolA-like protein KSA16_015570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KSA16_015575 PF04963 Sigma-54 factor, core binding domain KSA16_015575 PF04552 Sigma-54, DNA binding domain KSA16_015575 PF00309 Sigma-54 factor, Activator interacting domain (AID) KSA16_015620 PF00795 Carbon-nitrogen hydrolase KSA16_015630 PF01047 MarR family KSA16_015635 PF02566 OsmC-like protein KSA16_015640 PF00437 Type II/IV secretion system protein KSA16_015660 PF01367 5'-3' exonuclease, C-terminal SAM fold KSA16_015660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KSA16_015660 PF00476 DNA polymerase family A KSA16_015660 PF01612 3'-5' exonuclease KSA16_015665 PF02325 YGGT family KSA16_015670 PF03807 NADP oxidoreductase coenzyme F420-dependent KSA16_015670 PF14748 Pyrroline-5-carboxylate reductase dimerisation KSA16_015675 PF01171 PP-loop family KSA16_015675 PF09179 TilS substrate binding domain KSA16_015675 PF11734 TilS substrate C-terminal domain KSA16_015680 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KSA16_015685 PF02541 Ppx/GppA phosphatase family KSA16_015690 PF00085 Thioredoxin KSA16_015695 PF07498 Rho termination factor, N-terminal domain KSA16_015695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSA16_015695 PF07497 Rho termination factor, RNA-binding domain KSA16_015710 PF00216 Bacterial DNA-binding protein KSA16_015715 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KSA16_015715 PF01588 Putative tRNA binding domain KSA16_015715 PF03147 Ferredoxin-fold anticodon binding domain KSA16_015715 PF03483 B3/4 domain KSA16_015715 PF03484 tRNA synthetase B5 domain KSA16_015720 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KSA16_015720 PF01409 tRNA synthetases class II core domain (F) KSA16_015740 PF00453 Ribosomal protein L20 KSA16_015745 PF01632 Ribosomal protein L35 KSA16_015755 PF07690 Major Facilitator Superfamily KSA16_015760 PF09335 SNARE associated Golgi protein KSA16_015765 PF00043 Glutathione S-transferase, C-terminal domain KSA16_015765 PF02798 Glutathione S-transferase, N-terminal domain KSA16_015770 PF00707 Translation initiation factor IF-3, C-terminal domain KSA16_015770 PF05198 Translation initiation factor IF-3, N-terminal domain KSA16_015775 PF03129 Anticodon binding domain KSA16_015775 PF02824 TGS domain KSA16_015775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSA16_015775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KSA16_015780 PF13193 AMP-binding enzyme C-terminal domain KSA16_015780 PF00501 AMP-binding enzyme KSA16_015785 PF04751 Protein of unknown function (DUF615) KSA16_015790 PF00381 PTS HPr component phosphorylation site KSA16_015795 PF03668 P-loop ATPase protein family KSA16_015800 PF02569 Pantoate-beta-alanine ligase KSA16_015805 PF02548 Ketopantoate hydroxymethyltransferase KSA16_015810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KSA16_015815 PF01743 Poly A polymerase head domain KSA16_015815 PF12626 Polymerase A arginine-rich C-terminus KSA16_015815 PF12627 Probable RNA and SrmB- binding site of polymerase A KSA16_015825 PF03819 MazG nucleotide pyrophosphohydrolase domain KSA16_015835 PF13291 ACT domain KSA16_015835 PF04607 Region found in RelA / SpoT proteins KSA16_015835 PF02824 TGS domain KSA16_015840 PF05958 tRNA (Uracil-5-)-methyltransferase KSA16_015850 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_015855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KSA16_015855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_015855 PF00072 Response regulator receiver domain KSA16_015855 PF00672 HAMP domain KSA16_015855 PF01627 Hpt domain KSA16_015855 PF00512 His Kinase A (phospho-acceptor) domain KSA16_015860 PF00378 Enoyl-CoA hydratase/isomerase KSA16_015865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KSA16_015865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSA16_015870 PF01261 Xylose isomerase-like TIM barrel KSA16_015880 PF00106 short chain dehydrogenase KSA16_015885 PF02233 NAD(P) transhydrogenase beta subunit KSA16_015890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KSA16_015895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KSA16_015895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KSA16_015900 PF00892 EamA-like transporter family KSA16_015910 PF07690 Major Facilitator Superfamily KSA16_015915 PF01207 Dihydrouridine synthase (Dus) KSA16_015925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_015925 PF03466 LysR substrate binding domain KSA16_015935 PF00899 ThiF family KSA16_015945 PF00330 Aconitase family (aconitate hydratase) KSA16_015945 PF00694 Aconitase C-terminal domain KSA16_015950 PF01026 TatD related DNase KSA16_015965 PF16658 Class II release factor RF3, C-terminal domain KSA16_015965 PF00009 Elongation factor Tu GTP binding domain KSA16_015965 PF03144 Elongation factor Tu domain 2 KSA16_015985 PF03707 Bacterial signalling protein N terminal repeat KSA16_015985 PF00563 EAL domain KSA16_015985 PF00990 Diguanylate cyclase, GGDEF domain KSA16_015990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KSA16_015990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KSA16_015995 PF10369 Small subunit of acetolactate synthase KSA16_016000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSA16_016000 PF00205 Thiamine pyrophosphate enzyme, central domain KSA16_016000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSA16_016010 PF08264 Anticodon-binding domain of tRNA KSA16_016010 PF00133 tRNA synthetases class I (I, L, M and V) KSA16_016010 PF13603 Leucyl-tRNA synthetase, Domain 2 KSA16_016010 PF09334 tRNA synthetases class I (M) KSA16_016025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSA16_016030 PF02687 FtsX-like permease family KSA16_016030 PF12704 MacB-like periplasmic core domain KSA16_016030 PF00005 ABC transporter KSA16_016035 PF02321 Outer membrane efflux protein KSA16_016050 PF00929 Exonuclease KSA16_016055 PF03193 RsgA GTPase KSA16_016065 PF00462 Glutaredoxin KSA16_016070 PF02556 Preprotein translocase subunit SecB KSA16_016085 PF00109 Beta-ketoacyl synthase, N-terminal domain KSA16_016085 PF02801 Beta-ketoacyl synthase, C-terminal domain KSA16_016100 PF00109 Beta-ketoacyl synthase, N-terminal domain KSA16_016100 PF02801 Beta-ketoacyl synthase, C-terminal domain KSA16_016110 PF04820 Tryptophan halogenase KSA16_016130 PF00221 Aromatic amino acid lyase KSA16_016145 PF00501 AMP-binding enzyme KSA16_016145 PF13193 AMP-binding enzyme C-terminal domain KSA16_016155 PF00550 Phosphopantetheine attachment site KSA16_016160 PF00550 Phosphopantetheine attachment site KSA16_016175 PF01926 50S ribosome-binding GTPase KSA16_016175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KSA16_016180 PF13360 PQQ-like domain KSA16_016190 PF13393 Histidyl-tRNA synthetase KSA16_016190 PF03129 Anticodon binding domain KSA16_016195 PF04551 GcpE protein KSA16_016200 PF13464 Domain of unknown function (DUF4115) KSA16_016210 PF04055 Radical SAM superfamily KSA16_016215 PF00334 Nucleoside diphosphate kinase KSA16_016220 PF04384 Iron-sulphur cluster assembly KSA16_016225 PF01569 PAP2 superfamily KSA16_016230 PF00534 Glycosyl transferases group 1 KSA16_016230 PF13439 Glycosyltransferase Family 4 KSA16_016235 PF11818 C-terminal domain of tail specific protease (DUF3340) KSA16_016235 PF03572 Peptidase family S41 KSA16_016235 PF17804 Tail specific protease N-terminal domain KSA16_016235 PF00595 PDZ domain KSA16_016240 PF00933 Glycosyl hydrolase family 3 N terminal domain KSA16_016250 PF00561 alpha/beta hydrolase fold KSA16_016255 PF00171 Aldehyde dehydrogenase family KSA16_016260 PF00171 Aldehyde dehydrogenase family KSA16_016265 PF01202 Shikimate kinase KSA16_016270 PF02447 GntP family permease KSA16_016275 PF01081 KDPG and KHG aldolase KSA16_016280 PF00920 Dehydratase family KSA16_016285 PF00871 Acetokinase family KSA16_016290 PF07085 DRTGG domain KSA16_016290 PF01515 Phosphate acetyl/butaryl transferase KSA16_016295 PF05681 Fumarate hydratase (Fumerase) KSA16_016295 PF05683 Fumarase C-terminus KSA16_016310 PF07724 AAA domain (Cdc48 subfamily) KSA16_016310 PF10431 C-terminal, D2-small domain, of ClpB protein KSA16_016310 PF06689 ClpX C4-type zinc finger KSA16_016315 PF00574 Clp protease KSA16_016320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSA16_016320 PF05697 Bacterial trigger factor protein (TF) KSA16_016320 PF05698 Bacterial trigger factor protein (TF) C-terminus KSA16_016325 PF07715 TonB-dependent Receptor Plug Domain KSA16_016325 PF00593 TonB dependent receptor KSA16_016330 PF13640 2OG-Fe(II) oxygenase superfamily KSA16_016330 PF18331 PKHD-type hydroxylase C-terminal domain KSA16_016335 PF00682 HMGL-like KSA16_016335 PF08502 LeuA allosteric (dimerisation) domain KSA16_016340 PF00561 alpha/beta hydrolase fold KSA16_016345 PF00561 alpha/beta hydrolase fold KSA16_016345 PF07021 Methionine biosynthesis protein MetW KSA16_016355 PF01725 Ham1 family KSA16_016365 PF02416 mttA/Hcf106 family KSA16_016370 PF02416 mttA/Hcf106 family KSA16_016375 PF00902 Sec-independent protein translocase protein (TatC) KSA16_016395 PF01790 Prolipoprotein diacylglyceryl transferase KSA16_016410 PF00303 Thymidylate synthase KSA16_016415 PF00186 Dihydrofolate reductase KSA16_016425 PF01625 Peptide methionine sulfoxide reductase KSA16_016435 PF01618 MotA/TolQ/ExbB proton channel family KSA16_016445 PF01842 ACT domain KSA16_016445 PF00551 Formyl transferase KSA16_016455 PF00171 Aldehyde dehydrogenase family KSA16_016460 PF00830 Ribosomal L28 family KSA16_016465 PF00471 Ribosomal protein L33 KSA16_016470 PF00999 Sodium/hydrogen exchanger family KSA16_016470 PF02254 TrkA-N domain KSA16_016490 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KSA16_016495 PF00580 UvrD/REP helicase N-terminal domain KSA16_016495 PF13361 UvrD-like helicase C-terminal domain KSA16_016510 PF08272 Topoisomerase I zinc-ribbon-like KSA16_016510 PF01131 DNA topoisomerase KSA16_016510 PF01751 Toprim domain KSA16_016510 PF01396 Topoisomerase DNA binding C4 zinc finger KSA16_016520 PF01638 HxlR-like helix-turn-helix KSA16_016525 PF00107 Zinc-binding dehydrogenase KSA16_016525 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_016530 PF04102 SlyX KSA16_016535 PF12848 ABC transporter KSA16_016535 PF00005 ABC transporter KSA16_016535 PF16326 ABC transporter C-terminal domain KSA16_016540 PF01810 LysE type translocator KSA16_016545 PF03279 Bacterial lipid A biosynthesis acyltransferase KSA16_016555 PF00375 Sodium:dicarboxylate symporter family KSA16_016565 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSA16_016565 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSA16_016585 PF01416 tRNA pseudouridine synthase KSA16_016595 PF01176 Translation initiation factor 1A / IF-1 KSA16_016610 PF00180 Isocitrate/isopropylmalate dehydrogenase KSA16_016620 PF00694 Aconitase C-terminal domain KSA16_016625 PF00330 Aconitase family (aconitate hydratase) KSA16_016635 PF03466 LysR substrate binding domain KSA16_016635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_016655 PF00293 NUDIX domain KSA16_016660 PF05524 PEP-utilising enzyme, N-terminal KSA16_016660 PF00391 PEP-utilising enzyme, mobile domain KSA16_016660 PF02896 PEP-utilising enzyme, TIM barrel domain KSA16_016660 PF01590 GAF domain KSA16_016665 PF00141 Peroxidase KSA16_016670 PF12706 Beta-lactamase superfamily domain KSA16_016675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_016675 PF03466 LysR substrate binding domain KSA16_016685 PF02798 Glutathione S-transferase, N-terminal domain KSA16_016690 PF08279 HTH domain KSA16_016690 PF13280 WYL domain KSA16_016695 PF13419 Haloacid dehalogenase-like hydrolase KSA16_016700 PF00849 RNA pseudouridylate synthase KSA16_016700 PF01479 S4 domain KSA16_016705 PF00575 S1 RNA binding domain KSA16_016705 PF12111 Polyribonucleotide phosphorylase C terminal KSA16_016705 PF10150 Ribonuclease E/G family KSA16_016710 PF00501 AMP-binding enzyme KSA16_016710 PF13193 AMP-binding enzyme C-terminal domain KSA16_016725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_016725 PF03466 LysR substrate binding domain KSA16_016730 PF00106 short chain dehydrogenase KSA16_016735 PF04055 Radical SAM superfamily KSA16_016735 PF06969 HemN C-terminal domain KSA16_016745 PF01554 MatE KSA16_016750 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KSA16_016750 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_016750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_016755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KSA16_016755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_016760 PF03109 ABC1 family KSA16_016765 PF01197 Ribosomal protein L31 KSA16_016780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KSA16_016800 PF03884 DNA gyrase inhibitor YacG KSA16_016805 PF00753 Metallo-beta-lactamase superfamily KSA16_016810 PF00762 Ferrochelatase KSA16_016820 PF01177 Asp/Glu/Hydantoin racemase KSA16_016835 PF01206 Sulfurtransferase TusA KSA16_016840 PF03471 Transporter associated domain KSA16_016840 PF00571 CBS domain KSA16_016845 PF00795 Carbon-nitrogen hydrolase KSA16_016850 PF01588 Putative tRNA binding domain KSA16_016860 PF07963 Prokaryotic N-terminal methylation motif KSA16_016860 PF08334 Type II secretion system (T2SS), protein G KSA16_016865 PF00482 Type II secretion system (T2SS), protein F KSA16_016870 PF00270 DEAD/DEAH box helicase KSA16_016870 PF00271 Helicase conserved C-terminal domain KSA16_016870 PF17764 3′ DNA-binding domain (3′BD) KSA16_016870 PF18074 Primosomal protein N C-terminal domain KSA16_016870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KSA16_016875 PF00999 Sodium/hydrogen exchanger family KSA16_016875 PF02254 TrkA-N domain KSA16_016880 PF01430 Hsp33 protein KSA16_016890 PF00226 DnaJ domain KSA16_016890 PF01556 DnaJ C terminal domain KSA16_016900 PF01544 CorA-like Mg2+ transporter protein KSA16_016905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KSA16_016905 PF01138 3' exoribonuclease family, domain 1 KSA16_016905 PF03725 3' exoribonuclease family, domain 2 KSA16_016905 PF00575 S1 RNA binding domain KSA16_016905 PF00013 KH domain KSA16_016910 PF00312 Ribosomal protein S15 KSA16_016915 PF00144 Beta-lactamase KSA16_016920 PF13538 UvrD-like helicase C-terminal domain KSA16_016925 PF12705 PD-(D/E)XK nuclease superfamily KSA16_016925 PF13361 UvrD-like helicase C-terminal domain KSA16_016925 PF00580 UvrD/REP helicase N-terminal domain KSA16_016930 PF17946 RecC C-terminal domain KSA16_016940 PF03976 Polyphosphate kinase 2 (PPK2) KSA16_016950 PF01209 ubiE/COQ5 methyltransferase family KSA16_016960 PF03109 ABC1 family KSA16_016965 PF01494 FAD binding domain KSA16_016970 PF01502 Phosphoribosyl-AMP cyclohydrolase KSA16_016985 PF13244 Domain of unknown function (DUF4040) KSA16_016985 PF00361 Proton-conducting membrane transporter KSA16_016985 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KSA16_016985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KSA16_016990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KSA16_016995 PF00361 Proton-conducting membrane transporter KSA16_017000 PF01899 Na+/H+ ion antiporter subunit KSA16_017005 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KSA16_017010 PF03334 Na+/H+ antiporter subunit KSA16_017015 PF02033 Ribosome-binding factor A KSA16_017020 PF00009 Elongation factor Tu GTP binding domain KSA16_017020 PF08364 Bacterial translation initiation factor IF-2 associated region KSA16_017020 PF04760 Translation initiation factor IF-2, N-terminal region KSA16_017020 PF11987 Translation-initiation factor 2 KSA16_017025 PF13184 NusA-like KH domain KSA16_017025 PF08529 NusA N-terminal domain KSA16_017025 PF00575 S1 RNA binding domain KSA16_017030 PF02576 RimP N-terminal domain KSA16_017030 PF17384 RimP C-terminal SH3 domain KSA16_017050 PF03840 Preprotein translocase SecG subunit KSA16_017055 PF00121 Triosephosphate isomerase KSA16_017060 PF00437 Type II/IV secretion system protein KSA16_017060 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KSA16_017065 PF00482 Type II secretion system (T2SS), protein F KSA16_017075 PF06750 Bacterial Peptidase A24 N-terminal domain KSA16_017075 PF01478 Type IV leader peptidase family KSA16_017080 PF01121 Dephospho-CoA kinase KSA16_017090 PF00588 SpoU rRNA Methylase family KSA16_017090 PF08032 RNA 2'-O ribose methyltransferase substrate binding KSA16_017095 PF06865 Pyrimidine/purine nucleoside phosphorylase KSA16_017105 PF02463 RecF/RecN/SMC N terminal domain KSA16_017110 PF02622 Uncharacterized ACR, COG1678 KSA16_017115 PF03652 Holliday junction resolvase KSA16_017120 PF13533 Biotin-lipoyl like KSA16_017145 PF12833 Helix-turn-helix domain KSA16_017145 PF02805 Metal binding domain of Ada KSA16_017145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSA16_017145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KSA16_017150 PF01066 CDP-alcohol phosphatidyltransferase KSA16_017160 PF01541 GIY-YIG catalytic domain KSA16_017160 PF08459 UvrC Helix-hairpin-helix N-terminal KSA16_017160 PF02151 UvrB/uvrC motif KSA16_017180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSA16_017180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSA16_017180 PF00378 Enoyl-CoA hydratase/isomerase KSA16_017185 PF02803 Thiolase, C-terminal domain KSA16_017185 PF00108 Thiolase, N-terminal domain KSA16_017205 PF09278 MerR, DNA binding KSA16_017205 PF00376 MerR family regulatory protein KSA16_017215 PF01323 DSBA-like thioredoxin domain KSA16_017230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_017230 PF00183 Hsp90 protein KSA16_017245 PF13726 Na+-H+ antiporter family KSA16_017245 PF03553 Na+/H+ antiporter family KSA16_017250 PF00561 alpha/beta hydrolase fold KSA16_017270 PF04997 RNA polymerase Rpb1, domain 1 KSA16_017270 PF00623 RNA polymerase Rpb1, domain 2 KSA16_017270 PF04983 RNA polymerase Rpb1, domain 3 KSA16_017270 PF05000 RNA polymerase Rpb1, domain 4 KSA16_017270 PF04998 RNA polymerase Rpb1, domain 5 KSA16_017275 PF04560 RNA polymerase Rpb2, domain 7 KSA16_017275 PF00562 RNA polymerase Rpb2, domain 6 KSA16_017275 PF04563 RNA polymerase beta subunit KSA16_017275 PF04565 RNA polymerase Rpb2, domain 3 KSA16_017275 PF04561 RNA polymerase Rpb2, domain 2 KSA16_017275 PF10385 RNA polymerase beta subunit external 1 domain KSA16_017280 PF00542 Ribosomal protein L7/L12 C-terminal domain KSA16_017280 PF16320 Ribosomal protein L7/L12 dimerisation domain KSA16_017285 PF00466 Ribosomal protein L10 KSA16_017290 PF00687 Ribosomal protein L1p/L10e family KSA16_017295 PF00298 Ribosomal protein L11, RNA binding domain KSA16_017295 PF03946 Ribosomal protein L11, N-terminal domain KSA16_017300 PF00467 KOW motif KSA16_017300 PF02357 Transcription termination factor nusG KSA16_017305 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KSA16_017315 PF03143 Elongation factor Tu C-terminal domain KSA16_017315 PF00009 Elongation factor Tu GTP binding domain KSA16_017315 PF03144 Elongation factor Tu domain 2 KSA16_017340 PF04715 Anthranilate synthase component I, N terminal region KSA16_017340 PF00425 chorismate binding enzyme KSA16_017345 PF13419 Haloacid dehalogenase-like hydrolase KSA16_017350 PF00498 FHA domain KSA16_017350 PF12401 Protein of unknown function (DUF2662) KSA16_017355 PF03958 Bacterial type II/III secretion system short domain KSA16_017355 PF00263 Bacterial type II and III secretion system protein KSA16_017370 PF00816 H-NS histone family KSA16_017395 PF03900 Porphobilinogen deaminase, C-terminal domain KSA16_017395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KSA16_017400 PF04397 LytTr DNA-binding domain KSA16_017400 PF00072 Response regulator receiver domain KSA16_017405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_017405 PF06580 Histidine kinase KSA16_017405 PF07694 5TMR of 5TMR-LYT KSA16_017410 PF14698 Argininosuccinate lyase C-terminal KSA16_017410 PF00206 Lyase KSA16_017415 PF04362 Bacterial Fe(2+) trafficking KSA16_017420 PF01895 PhoU domain KSA16_017425 PF02321 Outer membrane efflux protein KSA16_017430 PF00892 EamA-like transporter family KSA16_017445 PF13667 ThiC-associated domain KSA16_017445 PF01964 Radical SAM ThiC family KSA16_017450 PF00293 NUDIX domain KSA16_017455 PF00149 Calcineurin-like phosphoesterase KSA16_017460 PF01258 Prokaryotic dksA/traR C4-type zinc finger KSA16_017465 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSA16_017470 PF01098 Cell cycle protein KSA16_017475 PF08245 Mur ligase middle domain KSA16_017475 PF02875 Mur ligase family, glutamate ligase domain KSA16_017485 PF07664 Ferrous iron transport protein B C terminus KSA16_017485 PF02421 Ferrous iron transport protein B KSA16_017485 PF07670 Nucleoside recognition KSA16_017495 PF02899 Phage integrase, N-terminal SAM-like domain KSA16_017495 PF00589 Phage integrase family KSA16_017500 PF10411 Disulfide bond isomerase protein N-terminus KSA16_017500 PF13098 Thioredoxin-like domain KSA16_017505 PF01842 ACT domain KSA16_017505 PF00742 Homoserine dehydrogenase KSA16_017505 PF03447 Homoserine dehydrogenase, NAD binding domain KSA16_017510 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_017515 PF00768 D-alanyl-D-alanine carboxypeptidase KSA16_017520 PF00196 Bacterial regulatory proteins, luxR family KSA16_017520 PF00072 Response regulator receiver domain KSA16_017525 PF00512 His Kinase A (phospho-acceptor) domain KSA16_017525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSA16_017530 PF00072 Response regulator receiver domain KSA16_017530 PF00158 Sigma-54 interaction domain KSA16_017530 PF02954 Bacterial regulatory protein, Fis family KSA16_017535 PF00595 PDZ domain KSA16_017535 PF03572 Peptidase family S41 KSA16_017540 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KSA16_017540 PF01676 Metalloenzyme superfamily KSA16_017545 PF03739 Lipopolysaccharide export system permease LptF/LptG KSA16_017555 PF00883 Cytosol aminopeptidase family, catalytic domain KSA16_017555 PF02789 Cytosol aminopeptidase family, N-terminal domain KSA16_017575 PF00677 Lumazine binding domain KSA16_017585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSA16_017585 PF01872 RibD C-terminal domain KSA16_017590 PF03477 ATP cone domain KSA16_017595 PF00909 Ammonium Transporter Family KSA16_017600 PF00543 Nitrogen regulatory protein P-II KSA16_017610 PF01078 Magnesium chelatase, subunit ChlI KSA16_017610 PF13335 Magnesium chelatase, subunit ChlI C-terminal KSA16_017620 PF00596 Class II Aldolase and Adducin N-terminal domain KSA16_017625 PF00701 Dihydrodipicolinate synthetase family KSA16_017640 PF03573 outer membrane porin, OprD family KSA16_017645 PF00719 Inorganic pyrophosphatase KSA16_017660 PF13193 AMP-binding enzyme C-terminal domain KSA16_017660 PF00501 AMP-binding enzyme KSA16_017665 PF03989 DNA gyrase C-terminal domain, beta-propeller KSA16_017665 PF00521 DNA gyrase/topoisomerase IV, subunit A KSA16_017670 PF07690 Major Facilitator Superfamily KSA16_017675 PF03458 UPF0126 domain KSA16_017680 PF02810 SEC-C motif KSA16_017685 PF03741 Integral membrane protein TerC family KSA16_017685 PF03471 Transporter associated domain KSA16_017690 PF03641 Possible lysine decarboxylase KSA16_017695 PF07690 Major Facilitator Superfamily KSA16_017705 PF00817 impB/mucB/samB family KSA16_017705 PF11799 impB/mucB/samB family C-terminal domain KSA16_017705 PF11798 IMS family HHH motif KSA16_017725 PF11842 Domain of unknown function (DUF3362) KSA16_017725 PF08497 Radical SAM N-terminal KSA16_017725 PF04055 Radical SAM superfamily KSA16_017745 PF03358 NADPH-dependent FMN reductase KSA16_017755 PF00291 Pyridoxal-phosphate dependent enzyme KSA16_017815 PF01327 Polypeptide deformylase KSA16_017825 PF02481 DNA recombination-mediator protein A KSA16_017825 PF17782 DprA winged helix domain KSA16_017830 PF01300 Telomere recombination KSA16_017835 PF00892 EamA-like transporter family KSA16_017840 PF00440 Bacterial regulatory proteins, tetR family KSA16_017845 PF07690 Major Facilitator Superfamily KSA16_017855 PF00255 Glutathione peroxidase KSA16_017865 PF11008 Protein of unknown function (DUF2846) KSA16_017870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KSA16_017875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSA16_017875 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSA16_017880 PF00231 ATP synthase KSA16_017885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSA16_017885 PF00306 ATP synthase alpha/beta chain, C terminal domain KSA16_017885 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSA16_017890 PF00213 ATP synthase delta (OSCP) subunit KSA16_017895 PF00430 ATP synthase B/B' CF(0) KSA16_017900 PF00137 ATP synthase subunit C KSA16_017905 PF00119 ATP synthase A chain KSA16_017925 PF00005 ABC transporter KSA16_017930 PF00950 ABC 3 transport family KSA16_017935 PF01810 LysE type translocator KSA16_017940 PF04261 Dyp-type peroxidase family KSA16_017950 PF00390 Malic enzyme, N-terminal domain KSA16_017950 PF03949 Malic enzyme, NAD binding domain KSA16_017955 PF00750 tRNA synthetases class I (R) KSA16_017955 PF05746 DALR anticodon binding domain KSA16_017955 PF03485 Arginyl tRNA synthetase N terminal domain KSA16_017975 PF05726 Pirin C-terminal cupin domain KSA16_017975 PF02678 Pirin KSA16_017985 PF03551 Transcriptional regulator PadR-like family KSA16_017990 PF13427 Domain of unknown function (DUF4111) KSA16_017990 PF01909 Nucleotidyltransferase domain KSA16_017995 PF02540 NAD synthase KSA16_017995 PF00117 Glutamine amidotransferase class-I KSA16_017995 PF00958 GMP synthase C terminal domain KSA16_018000 PF04286 Protein of unknown function (DUF445) KSA16_018010 PF09335 SNARE associated Golgi protein KSA16_018025 PF13614 AAA domain KSA16_018035 PF01722 BolA-like protein KSA16_018055 PF00378 Enoyl-CoA hydratase/isomerase KSA16_018060 PF00378 Enoyl-CoA hydratase/isomerase KSA16_018065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSA16_018065 PF02770 Acyl-CoA dehydrogenase, middle domain KSA16_018065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSA16_018070 PF13193 AMP-binding enzyme C-terminal domain KSA16_018070 PF00501 AMP-binding enzyme KSA16_018075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSA16_018075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KSA16_018080 PF00171 Aldehyde dehydrogenase family KSA16_018090 PF00324 Amino acid permease KSA16_018095 PF00324 Amino acid permease KSA16_018100 PF01042 Endoribonuclease L-PSP KSA16_018105 PF00842 Alanine racemase, C-terminal domain KSA16_018105 PF01168 Alanine racemase, N-terminal domain KSA16_018110 PF01266 FAD dependent oxidoreductase KSA16_018115 PF01037 Lrp/AsnC ligand binding domain KSA16_018125 PF00593 TonB dependent receptor KSA16_018125 PF07715 TonB-dependent Receptor Plug Domain KSA16_018140 PF00849 RNA pseudouridylate synthase KSA16_018165 PF13296 Putative type VI secretion system Rhs element Vgr KSA16_018165 PF04717 Type VI secretion system, phage-baseplate injector KSA16_018165 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KSA16_018205 PF00694 Aconitase C-terminal domain KSA16_018205 PF00330 Aconitase family (aconitate hydratase) KSA16_018210 PF00285 Citrate synthase, C-terminal domain KSA16_018220 PF07729 FCD domain KSA16_018220 PF00392 Bacterial regulatory proteins, gntR family KSA16_018230 PF00155 Aminotransferase class I and II KSA16_018235 PF01565 FAD binding domain KSA16_018235 PF09330 D-lactate dehydrogenase, membrane binding KSA16_018240 PF01070 FMN-dependent dehydrogenase KSA16_018245 PF00392 Bacterial regulatory proteins, gntR family KSA16_018245 PF07729 FCD domain KSA16_018250 PF02652 L-lactate permease KSA16_018255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSA16_018255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSA16_018255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSA16_018255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSA16_018270 PF16363 GDP-mannose 4,6 dehydratase KSA16_018275 PF00342 Phosphoglucose isomerase KSA16_018280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSA16_018280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSA16_018280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSA16_018285 PF00483 Nucleotidyl transferase KSA16_018290 PF02397 Bacterial sugar transferase KSA16_018295 PF00535 Glycosyl transferase family 2 KSA16_018305 PF05159 Capsule polysaccharide biosynthesis protein KSA16_018315 PF03102 NeuB family KSA16_018315 PF08666 SAF domain KSA16_018330 PF02348 Cytidylyltransferase KSA16_018335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSA16_018340 PF02719 Polysaccharide biosynthesis protein KSA16_018345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSA16_018345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSA16_018345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSA16_018350 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KSA16_018350 PF10531 SLBB domain KSA16_018350 PF02563 Polysaccharide biosynthesis/export protein KSA16_018355 PF01451 Low molecular weight phosphotyrosine protein phosphatase KSA16_018360 PF13807 G-rich domain on putative tyrosine kinase KSA16_018360 PF13614 AAA domain KSA16_018360 PF02706 Chain length determinant protein KSA16_018365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSA16_018365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KSA16_018370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSA16_018370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KSA16_018375 PF03023 Lipid II flippase MurJ KSA16_018380 PF01510 N-acetylmuramoyl-L-alanine amidase KSA16_018385 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KSA16_018385 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KSA16_018395 PF04185 Phosphoesterase family KSA16_018395 PF05506 Domain of unknown function (DUF756) KSA16_018400 PF03725 3' exoribonuclease family, domain 2 KSA16_018400 PF01138 3' exoribonuclease family, domain 1 KSA16_018405 PF00487 Fatty acid desaturase KSA16_018410 PF00175 Oxidoreductase NAD-binding domain KSA16_018415 PF00440 Bacterial regulatory proteins, tetR family KSA16_018420 PF08360 QacR-like protein, C-terminal region KSA16_018420 PF00440 Bacterial regulatory proteins, tetR family KSA16_018425 PF01323 DSBA-like thioredoxin domain KSA16_018435 PF13419 Haloacid dehalogenase-like hydrolase KSA16_018440 PF00106 short chain dehydrogenase KSA16_018455 PF00583 Acetyltransferase (GNAT) family KSA16_018455 PF00696 Amino acid kinase family KSA16_018460 PF09084 NMT1/THI5 like KSA16_018465 PF09084 NMT1/THI5 like KSA16_018470 PF00296 Luciferase-like monooxygenase KSA16_018475 PF00528 Binding-protein-dependent transport system inner membrane component KSA16_018480 PF00005 ABC transporter KSA16_018485 PF00440 Bacterial regulatory proteins, tetR family KSA16_018485 PF08362 YcdC-like protein, C-terminal region KSA16_018490 PF01048 Phosphorylase superfamily KSA16_018500 PF01687 Riboflavin kinase KSA16_018500 PF06574 FAD synthetase KSA16_018505 PF08264 Anticodon-binding domain of tRNA KSA16_018505 PF06827 Zinc finger found in FPG and IleRS KSA16_018505 PF00133 tRNA synthetases class I (I, L, M and V) KSA16_018510 PF01252 Signal peptidase (SPase) II KSA16_018515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSA16_018555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KSA16_018560 PF07859 alpha/beta hydrolase fold KSA16_018580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSA16_018580 PF03466 LysR substrate binding domain KSA16_018585 PF01025 GrpE KSA16_018590 PF00012 Hsp70 protein KSA16_018610 PF13406 Transglycosylase SLT domain KSA16_018615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KSA16_018615 PF02222 ATP-grasp domain KSA16_018620 PF00731 AIR carboxylase KSA16_018630 PF08245 Mur ligase middle domain KSA16_018630 PF01225 Mur ligase family, catalytic domain KSA16_018630 PF02875 Mur ligase family, glutamate ligase domain KSA16_018640 PF01569 PAP2 superfamily KSA16_018645 PF03741 Integral membrane protein TerC family KSA16_018655 PF03738 Glutathionylspermidine synthase preATP-grasp KSA16_018660 PF00355 Rieske [2Fe-2S] domain KSA16_018665 PF01979 Amidohydrolase family KSA16_018670 PF00156 Phosphoribosyl transferase domain KSA16_018680 PF13098 Thioredoxin-like domain KSA16_018680 PF10411 Disulfide bond isomerase protein N-terminus KSA16_018685 PF01545 Cation efflux family KSA16_018685 PF16916 Dimerisation domain of Zinc Transporter KSA16_018690 PF02583 Metal-sensitive transcriptional repressor KSA16_018695 PF01926 50S ribosome-binding GTPase KSA16_018695 PF12631 MnmE helical domain KSA16_018695 PF10396 GTP-binding protein TrmE N-terminus KSA16_018700 PF02096 60Kd inner membrane protein KSA16_018700 PF14849 YidC periplasmic domain KSA16_018705 PF01809 Putative membrane protein insertion efficiency factor KSA16_018710 PF00825 Ribonuclease P KSA16_018715 PF00468 Ribosomal protein L34 KSA16_018725 PF00476 DNA polymerase family A KSA16_018725 PF01612 3'-5' exonuclease KSA16_018725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KSA16_018725 PF01367 5'-3' exonuclease, C-terminal SAM fold KSA16_018740 PF14579 Helix-hairpin-helix motif KSA16_018740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KSA16_018740 PF07733 Bacterial DNA polymerase III alpha NTPase domain KSA16_018740 PF02811 PHP domain KSA16_018750 PF07733 Bacterial DNA polymerase III alpha NTPase domain KSA16_018750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KSA16_018750 PF14579 Helix-hairpin-helix motif KSA16_018750 PF02811 PHP domain KSA16_018785 PF00589 Phage integrase family KSA16_018785 PF02899 Phage integrase, N-terminal SAM-like domain KSA16_018795 PF07015 VirC1 protein KSA16_018810 PF00625 Guanylate kinase KSA16_018840 PF08275 DNA primase catalytic core, N-terminal domain KSA16_018840 PF01807 CHC2 zinc finger KSA16_018840 PF10410 DnaB-helicase binding domain of primase KSA16_019020 PF00005 ABC transporter KSA16_019020 PF09383 NIL domain KSA16_019040 PF02559 CarD-like/TRCF domain KSA16_019040 PF17757 UvrB interaction domain KSA16_019040 PF03461 TRCF domain KSA16_019040 PF00270 DEAD/DEAH box helicase KSA16_019040 PF00271 Helicase conserved C-terminal domain KSA16_019055 PF04650 YSIRK type signal peptide KSA16_019055 PF03373 Octapeptide repeat KSA16_019055 PF01476 LysM domain KSA16_019055 PF00746 LPXTG cell wall anchor motif KSA16_019055 PF02216 B domain KSA16_019120 PF13823 Alcohol dehydrogenase GroES-associated KSA16_019120 PF00107 Zinc-binding dehydrogenase KSA16_019120 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_019135 PF02583 Metal-sensitive transcriptional repressor KSA16_019140 PF00107 Zinc-binding dehydrogenase KSA16_019140 PF08240 Alcohol dehydrogenase GroES-like domain KSA16_019145 PF00756 Putative esterase KSA16_019160 PF00465 Iron-containing alcohol dehydrogenase KSA16_019170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSA16_019180 PF16925 Tetracyclin repressor-like, C-terminal domain KSA16_019180 PF00440 Bacterial regulatory proteins, tetR family KSA16_019190 PF13737 Transposase DDE domain KSA16_019225 PF00929 Exonuclease KSA16_019265 PF00268 Ribonucleotide reductase, small chain KSA16_019270 PF03477 ATP cone domain KSA16_019270 PF02867 Ribonucleotide reductase, barrel domain KSA16_019270 PF00317 Ribonucleotide reductase, all-alpha domain KSA16_019290 PF06470 SMC proteins Flexible Hinge Domain KSA16_019290 PF02463 RecF/RecN/SMC N terminal domain