locus-tag class description FDM99_00010 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDM99_00010 PF01266 FAD dependent oxidoreductase FDM99_00020 PF04461 Protein of unknown function (DUF520) FDM99_00030 PF03061 Thioesterase superfamily FDM99_00035 PF00085 Thioredoxin FDM99_00040 PF00561 alpha/beta hydrolase fold FDM99_00045 PF00753 Metallo-beta-lactamase superfamily FDM99_00045 PF04273 Putative phosphatase (DUF442) FDM99_00055 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_00055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDM99_00090 PF00990 Diguanylate cyclase, GGDEF domain FDM99_00090 PF17152 Periplasmic sensor domain FDM99_00095 PF01389 OmpA-like transmembrane domain FDM99_00095 PF00691 OmpA family FDM99_00100 PF00149 Calcineurin-like phosphoesterase FDM99_00100 PF10518 TAT (twin-arginine translocation) pathway signal sequence FDM99_00105 PF13091 PLD-like domain FDM99_00115 PF16360 GTP-binding GTPase Middle Region FDM99_00115 PF13167 GTP-binding GTPase N-terminal FDM99_00115 PF01926 50S ribosome-binding GTPase FDM99_00135 PF00149 Calcineurin-like phosphoesterase FDM99_00140 PF00398 Ribosomal RNA adenine dimethylase FDM99_00145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FDM99_00150 PF00572 Ribosomal protein L13 FDM99_00155 PF00380 Ribosomal protein S9/S16 FDM99_00160 PF00043 Glutathione S-transferase, C-terminal domain FDM99_00160 PF02798 Glutathione S-transferase, N-terminal domain FDM99_00165 PF04386 Stringent starvation protein B FDM99_00175 PF02785 Biotin carboxylase C-terminal domain FDM99_00175 PF00289 Biotin carboxylase, N-terminal domain FDM99_00175 PF00364 Biotin-requiring enzyme FDM99_00175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDM99_00180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDM99_00180 PF00378 Enoyl-CoA hydratase/isomerase FDM99_00180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDM99_00185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_00185 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_00185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_00190 PF01039 Carboxyl transferase domain FDM99_00205 PF17932 Tetracyclin repressor-like, C-terminal domain FDM99_00205 PF00440 Bacterial regulatory proteins, tetR family FDM99_00210 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_00210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_00210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_00255 PF01066 CDP-alcohol phosphatidyltransferase FDM99_00260 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDM99_00280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDM99_00280 PF00056 lactate/malate dehydrogenase, NAD binding domain FDM99_00290 PF10145 Phage-related minor tail protein FDM99_00290 PF01551 Peptidase family M23 FDM99_00290 PF01464 Transglycosylase SLT domain FDM99_00295 PF00919 Uncharacterized protein family UPF0004 FDM99_00295 PF04055 Radical SAM superfamily FDM99_00295 PF01938 TRAM domain FDM99_00300 PF02562 PhoH-like protein FDM99_00305 PF02130 Uncharacterized protein family UPF0054 FDM99_00330 PF03358 NADPH-dependent FMN reductase FDM99_00335 PF03631 Virulence factor BrkB FDM99_00340 PF00892 EamA-like transporter family FDM99_00345 PF12833 Helix-turn-helix domain FDM99_00350 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDM99_00400 PF01432 Peptidase family M3 FDM99_00405 PF09526 Probable metal-binding protein (DUF2387) FDM99_00435 PF03937 Flavinator of succinate dehydrogenase FDM99_00440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_00440 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_00440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_00445 PF00743 Flavin-binding monooxygenase-like FDM99_00450 PF01196 Ribosomal protein L17 FDM99_00455 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FDM99_00455 PF01000 RNA polymerase Rpb3/RpoA insert domain FDM99_00455 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FDM99_00460 PF00163 Ribosomal protein S4/S9 N-terminal domain FDM99_00460 PF01479 S4 domain FDM99_00465 PF00411 Ribosomal protein S11 FDM99_00470 PF00416 Ribosomal protein S13/S18 FDM99_00475 PF00444 Ribosomal protein L36 FDM99_00480 PF00344 SecY translocase FDM99_00485 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDM99_00490 PF00327 Ribosomal protein L30p/L7e FDM99_00495 PF00333 Ribosomal protein S5, N-terminal domain FDM99_00495 PF03719 Ribosomal protein S5, C-terminal domain FDM99_00500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDM99_00505 PF00347 Ribosomal protein L6 FDM99_00510 PF00410 Ribosomal protein S8 FDM99_00515 PF00253 Ribosomal protein S14p/S29e FDM99_00520 PF00673 ribosomal L5P family C-terminus FDM99_00520 PF00281 Ribosomal protein L5 FDM99_00525 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDM99_00525 PF00467 KOW motif FDM99_00530 PF00238 Ribosomal protein L14p/L23e FDM99_00535 PF00366 Ribosomal protein S17 FDM99_00540 PF00831 Ribosomal L29 protein FDM99_00545 PF00252 Ribosomal protein L16p/L10e FDM99_00550 PF00189 Ribosomal protein S3, C-terminal domain FDM99_00550 PF07650 KH domain FDM99_00555 PF00237 Ribosomal protein L22p/L17e FDM99_00560 PF00203 Ribosomal protein S19 FDM99_00565 PF00181 Ribosomal Proteins L2, RNA binding domain FDM99_00565 PF03947 Ribosomal Proteins L2, C-terminal domain FDM99_00570 PF00276 Ribosomal protein L23 FDM99_00575 PF00573 Ribosomal protein L4/L1 family FDM99_00580 PF00297 Ribosomal protein L3 FDM99_00585 PF00338 Ribosomal protein S10p/S20e FDM99_00590 PF00117 Glutamine amidotransferase class-I FDM99_00595 PF01053 Cys/Met metabolism PLP-dependent enzyme FDM99_00600 PF05872 Bacterial protein of unknown function (DUF853) FDM99_00605 PF00175 Oxidoreductase NAD-binding domain FDM99_00605 PF00042 Globin FDM99_00605 PF00970 Oxidoreductase FAD-binding domain FDM99_00610 PF02082 Transcriptional regulator FDM99_00615 PF01926 50S ribosome-binding GTPase FDM99_00625 PF00375 Sodium:dicarboxylate symporter family FDM99_00635 PF01553 Acyltransferase FDM99_00650 PF00270 DEAD/DEAH box helicase FDM99_00650 PF00271 Helicase conserved C-terminal domain FDM99_00650 PF17191 RecG wedge domain FDM99_00655 PF00156 Phosphoribosyl transferase domain FDM99_00660 PF00293 NUDIX domain FDM99_00665 PF03641 Possible lysine decarboxylase FDM99_00670 PF01544 CorA-like Mg2+ transporter protein FDM99_00680 PF05494 MlaC protein FDM99_00690 PF02405 Permease MlaE FDM99_00695 PF00005 ABC transporter FDM99_00705 PF03880 DbpA RNA binding domain FDM99_00705 PF00271 Helicase conserved C-terminal domain FDM99_00705 PF12343 Cold shock protein DEAD box A FDM99_00705 PF00270 DEAD/DEAH box helicase FDM99_00710 PF00459 Inositol monophosphatase family FDM99_00715 PF02780 Transketolase, C-terminal domain FDM99_00715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FDM99_00715 PF02779 Transketolase, pyrimidine binding domain FDM99_00720 PF00925 GTP cyclohydrolase II FDM99_00725 PF01218 Coproporphyrinogen III oxidase FDM99_00730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDM99_00730 PF01488 Shikimate / quinate 5-dehydrogenase FDM99_00730 PF08501 Shikimate dehydrogenase substrate binding domain FDM99_00740 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDM99_00740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_00740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_00740 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_00750 PF04024 PspC domain FDM99_00755 PF00571 CBS domain FDM99_00780 PF02091 Glycyl-tRNA synthetase alpha subunit FDM99_00785 PF02092 Glycyl-tRNA synthetase beta subunit FDM99_00785 PF05746 DALR anticodon binding domain FDM99_00805 PF00892 EamA-like transporter family FDM99_00810 PF03466 LysR substrate binding domain FDM99_00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_00840 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FDM99_00845 PF04996 Succinylarginine dihydrolase FDM99_00850 PF00171 Aldehyde dehydrogenase family FDM99_00855 PF04958 Arginine N-succinyltransferase beta subunit FDM99_00860 PF00202 Aminotransferase class-III FDM99_00865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDM99_00865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDM99_00870 PF00324 Amino acid permease FDM99_00900 PF13614 AAA domain FDM99_00905 PF01594 AI-2E family transporter FDM99_00910 PF00080 Copper/zinc superoxide dismutase (SODC) FDM99_00915 PF12805 FUSC-like inner membrane protein yccS FDM99_00920 PF07690 Major Facilitator Superfamily FDM99_00930 PF02525 Flavodoxin-like fold FDM99_00935 PF03992 Antibiotic biosynthesis monooxygenase FDM99_00950 PF01565 FAD binding domain FDM99_00950 PF02913 FAD linked oxidases, C-terminal domain FDM99_00955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDM99_00955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDM99_00960 PF00892 EamA-like transporter family FDM99_00965 PF00892 EamA-like transporter family FDM99_00975 PF01925 Sulfite exporter TauE/SafE FDM99_00980 PF09157 Pseudouridine synthase II TruB, C-terminal FDM99_00980 PF16198 tRNA pseudouridylate synthase B C-terminal domain FDM99_00980 PF01509 TruB family pseudouridylate synthase (N terminal domain) FDM99_00985 PF03280 Proteobacterial lipase chaperone protein FDM99_00990 PF00561 alpha/beta hydrolase fold FDM99_00995 PF01245 Ribosomal protein L19 FDM99_01000 PF01746 tRNA (Guanine-1)-methyltransferase FDM99_01005 PF05239 PRC-barrel domain FDM99_01005 PF01782 RimM N-terminal domain FDM99_01010 PF00886 Ribosomal protein S16 FDM99_01055 PF02401 LytB protein FDM99_01060 PF00625 Guanylate kinase FDM99_01065 PF01192 RNA polymerase Rpb6 FDM99_01075 PF04607 Region found in RelA / SpoT proteins FDM99_01075 PF13291 ACT domain FDM99_01075 PF02824 TGS domain FDM99_01080 PF01042 Endoribonuclease L-PSP FDM99_01085 PF04324 BFD-like [2Fe-2S] binding domain FDM99_01090 PF00210 Ferritin-like domain FDM99_01095 PF04932 O-Antigen ligase FDM99_01095 PF15864 Protein glycosylation ligase FDM99_01095 PF11846 Virulence factor membrane-bound polymerase, C-terminal FDM99_01105 PF00114 Pilin (bacterial filament) FDM99_01105 PF07963 Prokaryotic N-terminal methylation motif FDM99_01115 PF04536 TPM domain FDM99_01120 PF04011 LemA family FDM99_01130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDM99_01130 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_01135 PF00310 Glutamine amidotransferases class-II FDM99_01135 PF04898 Glutamate synthase central domain FDM99_01135 PF01645 Conserved region in glutamate synthase FDM99_01135 PF01493 GXGXG motif FDM99_01145 PF01761 3-dehydroquinate synthase FDM99_01150 PF01202 Shikimate kinase FDM99_01180 PF17092 Penicillin-binding protein OB-like domain FDM99_01180 PF00905 Penicillin binding protein transpeptidase domain FDM99_01180 PF00912 Transglycosylase FDM99_01185 PF13847 Methyltransferase domain FDM99_01195 PF00953 Glycosyl transferase family 4 FDM99_01200 PF01225 Mur ligase family, catalytic domain FDM99_01200 PF02875 Mur ligase family, glutamate ligase domain FDM99_01200 PF08245 Mur ligase middle domain FDM99_01205 PF01225 Mur ligase family, catalytic domain FDM99_01205 PF02875 Mur ligase family, glutamate ligase domain FDM99_01205 PF08245 Mur ligase middle domain FDM99_01210 PF00905 Penicillin binding protein transpeptidase domain FDM99_01210 PF03717 Penicillin-binding Protein dimerisation domain FDM99_01220 PF01795 MraW methylase family FDM99_01235 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDM99_01250 PF00324 Amino acid permease FDM99_01280 PF01545 Cation efflux family FDM99_01285 PF00873 AcrB/AcrD/AcrF family FDM99_01290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_01290 PF00529 HlyD membrane-fusion protein of T1SS FDM99_01315 PF00005 ABC transporter FDM99_01315 PF12848 ABC transporter FDM99_01320 PF01053 Cys/Met metabolism PLP-dependent enzyme FDM99_01325 PF00106 short chain dehydrogenase FDM99_01330 PF00916 Sulfate permease family FDM99_01330 PF01740 STAS domain FDM99_01335 PF00575 S1 RNA binding domain FDM99_01335 PF09371 Tex-like protein N-terminal domain FDM99_01335 PF16921 Tex protein YqgF-like domain FDM99_01335 PF17674 HHH domain FDM99_01340 PF00486 Transcriptional regulatory protein, C terminal FDM99_01340 PF00072 Response regulator receiver domain FDM99_01345 PF00512 His Kinase A (phospho-acceptor) domain FDM99_01345 PF00672 HAMP domain FDM99_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_01355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FDM99_01355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FDM99_01360 PF00583 Acetyltransferase (GNAT) family FDM99_01380 PF00475 Imidazoleglycerol-phosphate dehydratase FDM99_01385 PF00117 Glutamine amidotransferase class-I FDM99_01400 PF00977 Histidine biosynthesis protein FDM99_01415 PF03992 Antibiotic biosynthesis monooxygenase FDM99_01435 PF00977 Histidine biosynthesis protein FDM99_01475 PF02705 K+ potassium transporter FDM99_01510 PF02311 AraC-like ligand binding domain FDM99_01510 PF12833 Helix-turn-helix domain FDM99_01515 PF00248 Aldo/keto reductase family FDM99_01535 PF00440 Bacterial regulatory proteins, tetR family FDM99_01540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_01540 PF00529 HlyD membrane-fusion protein of T1SS FDM99_01545 PF00873 AcrB/AcrD/AcrF family FDM99_01550 PF03466 LysR substrate binding domain FDM99_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_01555 PF07690 Major Facilitator Superfamily FDM99_01575 PF01593 Flavin containing amine oxidoreductase FDM99_01580 PF02678 Pirin FDM99_01580 PF05726 Pirin C-terminal cupin domain FDM99_01585 PF00857 Isochorismatase family FDM99_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_01595 PF00171 Aldehyde dehydrogenase family FDM99_01600 PF00202 Aminotransferase class-III FDM99_01605 PF00392 Bacterial regulatory proteins, gntR family FDM99_01605 PF00155 Aminotransferase class I and II FDM99_01610 PF00324 Amino acid permease FDM99_01620 PF03591 AzlC protein FDM99_01630 PF00436 Single-strand binding protein family FDM99_01635 PF07690 Major Facilitator Superfamily FDM99_01645 PF08543 Phosphomethylpyrimidine kinase FDM99_01645 PF03070 TENA/THI-4/PQQC family FDM99_01645 PF02581 Thiamine monophosphate synthase FDM99_01650 PF06942 GlpM protein FDM99_01660 PF00107 Zinc-binding dehydrogenase FDM99_01660 PF00698 Acyl transferase domain FDM99_01660 PF16197 Ketoacyl-synthetase C-terminal extension FDM99_01660 PF00109 Beta-ketoacyl synthase, N-terminal domain FDM99_01660 PF02801 Beta-ketoacyl synthase, C-terminal domain FDM99_01660 PF00550 Phosphopantetheine attachment site FDM99_01660 PF14765 Polyketide synthase dehydratase FDM99_01660 PF08659 KR domain FDM99_01660 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_01665 PF16925 Tetracyclin repressor-like, C-terminal domain FDM99_01665 PF00440 Bacterial regulatory proteins, tetR family FDM99_01670 PF17760 UvrA interaction domain FDM99_01670 PF17755 UvrA DNA-binding domain FDM99_01670 PF00005 ABC transporter FDM99_01675 PF17158 Membrane-associated sensor, integral membrane domain FDM99_01675 PF00990 Diguanylate cyclase, GGDEF domain FDM99_01695 PF00474 Sodium:solute symporter family FDM99_01700 PF04341 Protein of unknown function, DUF485 FDM99_01705 PF00672 HAMP domain FDM99_01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_01705 PF00512 His Kinase A (phospho-acceptor) domain FDM99_01705 PF00072 Response regulator receiver domain FDM99_01705 PF01627 Hpt domain FDM99_01715 PF00072 Response regulator receiver domain FDM99_01715 PF00196 Bacterial regulatory proteins, luxR family FDM99_01720 PF03358 NADPH-dependent FMN reductase FDM99_01725 PF00296 Luciferase-like monooxygenase FDM99_01730 PF01037 Lrp/AsnC ligand binding domain FDM99_01735 PF00857 Isochorismatase family FDM99_01740 PF16177 Acetyl-coenzyme A synthetase N-terminus FDM99_01740 PF00501 AMP-binding enzyme FDM99_01740 PF13193 AMP-binding enzyme C-terminal domain FDM99_01750 PF00924 Mechanosensitive ion channel FDM99_01755 PF04452 RNA methyltransferase FDM99_01760 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FDM99_01765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_01785 PF17768 RecJ OB domain FDM99_01785 PF02272 DHHA1 domain FDM99_01785 PF01368 DHH family FDM99_01790 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FDM99_01790 PF01243 Pyridoxamine 5'-phosphate oxidase FDM99_01795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDM99_01795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDM99_01795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDM99_01795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDM99_01800 PF00478 IMP dehydrogenase / GMP reductase domain FDM99_01800 PF00571 CBS domain FDM99_01805 PF03692 Putative zinc- or iron-chelating domain FDM99_01810 PF00258 Flavodoxin FDM99_01810 PF01613 Flavin reductase like domain FDM99_01815 PF07715 TonB-dependent Receptor Plug Domain FDM99_01815 PF00593 TonB dependent receptor FDM99_01820 PF01169 Uncharacterized protein family UPF0016 FDM99_01830 PF00364 Biotin-requiring enzyme FDM99_01830 PF02817 e3 binding domain FDM99_01830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDM99_01835 PF17831 Pyruvate dehydrogenase E1 component middle domain FDM99_01835 PF00456 Transketolase, thiamine diphosphate binding domain FDM99_01840 PF01551 Peptidase family M23 FDM99_01850 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDM99_01855 PF00091 Tubulin/FtsZ family, GTPase domain FDM99_01855 PF12327 FtsZ family, C-terminal domain FDM99_01860 PF02491 SHS2 domain inserted in FTSA FDM99_01865 PF03799 Cell division protein FtsQ FDM99_01865 PF08478 POTRA domain, FtsQ-type FDM99_01870 PF01820 D-ala D-ala ligase N-terminus FDM99_01870 PF07478 D-ala D-ala ligase C-terminus FDM99_01875 PF02875 Mur ligase family, glutamate ligase domain FDM99_01875 PF08245 Mur ligase middle domain FDM99_01875 PF01225 Mur ligase family, catalytic domain FDM99_01880 PF03033 Glycosyltransferase family 28 N-terminal domain FDM99_01880 PF04101 Glycosyltransferase family 28 C-terminal domain FDM99_01885 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FDM99_01885 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FDM99_01900 PF00156 Phosphoribosyl transferase domain FDM99_01905 PF03372 Endonuclease/Exonuclease/phosphatase family FDM99_01910 PF03960 ArsC family FDM99_01920 PF07859 alpha/beta hydrolase fold FDM99_01925 PF07694 5TMR of 5TMR-LYT FDM99_01925 PF00990 Diguanylate cyclase, GGDEF domain FDM99_01930 PF02683 Cytochrome C biogenesis protein transmembrane region FDM99_01930 PF11412 Disulphide bond corrector protein DsbC FDM99_01960 PF00576 HIUase/Transthyretin family FDM99_01965 PF00860 Permease family FDM99_01975 PF01494 FAD binding domain FDM99_01980 PF03561 Allantoicase repeat FDM99_01985 PF04115 Ureidoglycolate lyase FDM99_01990 PF01751 Toprim domain FDM99_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_01990 PF00986 DNA gyrase B subunit, carboxyl terminus FDM99_01990 PF00204 DNA gyrase B FDM99_01995 PF05728 Uncharacterised protein family (UPF0227) FDM99_02015 PF02600 Disulfide bond formation protein DsbB FDM99_02020 PF04262 Glutamate-cysteine ligase FDM99_02035 PF04286 Protein of unknown function (DUF445) FDM99_02040 PF00155 Aminotransferase class I and II FDM99_02045 PF01554 MatE FDM99_02050 PF00106 short chain dehydrogenase FDM99_02060 PF00072 Response regulator receiver domain FDM99_02060 PF00486 Transcriptional regulatory protein, C terminal FDM99_02065 PF11808 Phosphate regulon sensor protein PhoR FDM99_02065 PF00989 PAS fold FDM99_02065 PF00512 His Kinase A (phospho-acceptor) domain FDM99_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_02080 PF02666 Phosphatidylserine decarboxylase FDM99_02085 PF00581 Rhodanese-like domain FDM99_02090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FDM99_02090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDM99_02100 PF00199 Catalase FDM99_02100 PF06628 Catalase-related immune-responsive FDM99_02105 PF02580 D-Tyr-tRNA(Tyr) deacylase FDM99_02135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDM99_02135 PF00925 GTP cyclohydrolase II FDM99_02140 PF00885 6,7-dimethyl-8-ribityllumazine synthase FDM99_02145 PF01029 NusB family FDM99_02150 PF02769 AIR synthase related protein, C-terminal domain FDM99_02150 PF00586 AIR synthase related protein, N-terminal domain FDM99_02155 PF04608 Phosphatidylglycerophosphatase A FDM99_02160 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_02160 PF12804 MobA-like NTP transferase domain FDM99_02160 PF14602 Hexapeptide repeat of succinyl-transferase FDM99_02165 PF01380 SIS domain FDM99_02170 PF01177 Asp/Glu/Hydantoin racemase FDM99_02175 PF13419 Haloacid dehalogenase-like hydrolase FDM99_02185 PF00491 Arginase family FDM99_02190 PF01979 Amidohydrolase family FDM99_02195 PF00324 Amino acid permease FDM99_02200 PF00221 Aromatic amino acid lyase FDM99_02205 PF01175 Urocanase Rossmann-like domain FDM99_02205 PF17392 Urocanase C-terminal domain FDM99_02205 PF17391 Urocanase N-terminal domain FDM99_02210 PF05962 HutD FDM99_02225 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDM99_02225 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDM99_02235 PF00324 Amino acid permease FDM99_02245 PF02798 Glutathione S-transferase, N-terminal domain FDM99_02245 PF14497 Glutathione S-transferase, C-terminal domain FDM99_02250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDM99_02260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDM99_02265 PF04463 Protein of unknown function (DUF523) FDM99_02270 PF01554 MatE FDM99_02275 PF01758 Sodium Bile acid symporter family FDM99_02280 PF00857 Isochorismatase family FDM99_02285 PF00701 Dihydrodipicolinate synthetase family FDM99_02295 PF01259 SAICAR synthetase FDM99_02305 PF01226 Formate/nitrite transporter FDM99_02310 PF12002 MgsA AAA+ ATPase C terminal FDM99_02310 PF16193 AAA C-terminal domain FDM99_02310 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_02325 PF00577 Outer membrane usher protein FDM99_02325 PF13954 PapC N-terminal domain FDM99_02325 PF13953 PapC C-terminal domain FDM99_02330 PF03692 Putative zinc- or iron-chelating domain FDM99_02335 PF07043 Protein of unknown function (DUF1328) FDM99_02350 PF14815 NUDIX domain FDM99_02350 PF00730 HhH-GPD superfamily base excision DNA repair protein FDM99_02350 PF00633 Helix-hairpin-helix motif FDM99_02350 PF10576 Iron-sulfur binding domain of endonuclease III FDM99_02365 PF03352 Methyladenine glycosylase FDM99_02370 PF00107 Zinc-binding dehydrogenase FDM99_02370 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_02375 PF00155 Aminotransferase class I and II FDM99_02375 PF00392 Bacterial regulatory proteins, gntR family FDM99_02390 PF03466 LysR substrate binding domain FDM99_02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_02395 PF00248 Aldo/keto reductase family FDM99_02400 PF07690 Major Facilitator Superfamily FDM99_02410 PF05173 Dihydrodipicolinate reductase, C-terminus FDM99_02410 PF01113 Dihydrodipicolinate reductase, N-terminus FDM99_02420 PF01556 DnaJ C terminal domain FDM99_02420 PF00684 DnaJ central domain FDM99_02420 PF00226 DnaJ domain FDM99_02430 PF00873 AcrB/AcrD/AcrF family FDM99_02435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_02440 PF08361 MAATS-type transcriptional repressor, C-terminal region FDM99_02440 PF00440 Bacterial regulatory proteins, tetR family FDM99_02445 PF00311 Phosphoenolpyruvate carboxylase FDM99_02450 PF00860 Permease family FDM99_02455 PF03466 LysR substrate binding domain FDM99_02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_02470 PF00920 Dehydratase family FDM99_02475 PF00551 Formyl transferase FDM99_02475 PF02911 Formyl transferase, C-terminal domain FDM99_02480 PF01029 NusB family FDM99_02480 PF01189 16S rRNA methyltransferase RsmB/F FDM99_02490 PF00209 Sodium:neurotransmitter symporter family FDM99_02500 PF00043 Glutathione S-transferase, C-terminal domain FDM99_02500 PF02798 Glutathione S-transferase, N-terminal domain FDM99_02535 PF00579 tRNA synthetases class I (W and Y) FDM99_02540 PF03702 Anhydro-N-acetylmuramic acid kinase FDM99_02545 PF00561 alpha/beta hydrolase fold FDM99_02550 PF01521 Iron-sulphur cluster biosynthesis FDM99_02570 PF00005 ABC transporter FDM99_02570 PF12848 ABC transporter FDM99_02575 PF09335 SNARE associated Golgi protein FDM99_02585 PF18053 DNA gyrase B subunit insert domain FDM99_02585 PF00204 DNA gyrase B FDM99_02585 PF00986 DNA gyrase B subunit, carboxyl terminus FDM99_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_02585 PF01751 Toprim domain FDM99_02590 PF02463 RecF/RecN/SMC N terminal domain FDM99_02595 PF00712 DNA polymerase III beta subunit, N-terminal domain FDM99_02595 PF02767 DNA polymerase III beta subunit, central domain FDM99_02595 PF02768 DNA polymerase III beta subunit, C-terminal domain FDM99_02600 PF08299 Bacterial dnaA protein helix-turn-helix FDM99_02600 PF11638 DnaA N-terminal domain FDM99_02600 PF00308 Bacterial dnaA protein FDM99_02605 PF00468 Ribosomal protein L34 FDM99_02610 PF00825 Ribonuclease P FDM99_02615 PF01809 Putative membrane protein insertion efficiency factor FDM99_02620 PF14849 YidC periplasmic domain FDM99_02620 PF02096 60Kd inner membrane protein FDM99_02625 PF01926 50S ribosome-binding GTPase FDM99_02625 PF10396 GTP-binding protein TrmE N-terminus FDM99_02625 PF12631 MnmE helical domain FDM99_02630 PF02583 Metal-sensitive transcriptional repressor FDM99_02635 PF01545 Cation efflux family FDM99_02635 PF16916 Dimerisation domain of Zinc Transporter FDM99_02640 PF13098 Thioredoxin-like domain FDM99_02640 PF10411 Disulfide bond isomerase protein N-terminus FDM99_02650 PF00156 Phosphoribosyl transferase domain FDM99_02655 PF01979 Amidohydrolase family FDM99_02660 PF00355 Rieske [2Fe-2S] domain FDM99_02665 PF03738 Glutathionylspermidine synthase preATP-grasp FDM99_02675 PF03741 Integral membrane protein TerC family FDM99_02680 PF01569 PAP2 superfamily FDM99_02690 PF08245 Mur ligase middle domain FDM99_02690 PF02875 Mur ligase family, glutamate ligase domain FDM99_02690 PF01225 Mur ligase family, catalytic domain FDM99_02705 PF00731 AIR carboxylase FDM99_02710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FDM99_02710 PF02222 ATP-grasp domain FDM99_02715 PF13406 Transglycosylase SLT domain FDM99_02735 PF00012 Hsp70 protein FDM99_02740 PF01025 GrpE FDM99_02765 PF07859 alpha/beta hydrolase fold FDM99_02770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDM99_02810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDM99_02815 PF01252 Signal peptidase (SPase) II FDM99_02820 PF08264 Anticodon-binding domain of tRNA FDM99_02820 PF06827 Zinc finger found in FPG and IleRS FDM99_02820 PF00133 tRNA synthetases class I (I, L, M and V) FDM99_02825 PF01687 Riboflavin kinase FDM99_02825 PF06574 FAD synthetase FDM99_02835 PF01048 Phosphorylase superfamily FDM99_02840 PF08362 YcdC-like protein, C-terminal region FDM99_02840 PF00440 Bacterial regulatory proteins, tetR family FDM99_02845 PF00005 ABC transporter FDM99_02850 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_02855 PF00296 Luciferase-like monooxygenase FDM99_02860 PF09084 NMT1/THI5 like FDM99_02865 PF09084 NMT1/THI5 like FDM99_02870 PF00583 Acetyltransferase (GNAT) family FDM99_02870 PF00696 Amino acid kinase family FDM99_02885 PF00106 short chain dehydrogenase FDM99_02890 PF13419 Haloacid dehalogenase-like hydrolase FDM99_02900 PF01323 DSBA-like thioredoxin domain FDM99_02905 PF00440 Bacterial regulatory proteins, tetR family FDM99_02905 PF08360 QacR-like protein, C-terminal region FDM99_02910 PF00440 Bacterial regulatory proteins, tetR family FDM99_02915 PF00175 Oxidoreductase NAD-binding domain FDM99_02920 PF00487 Fatty acid desaturase FDM99_02925 PF03725 3' exoribonuclease family, domain 2 FDM99_02925 PF01138 3' exoribonuclease family, domain 1 FDM99_02940 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FDM99_02940 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FDM99_02945 PF01510 N-acetylmuramoyl-L-alanine amidase FDM99_02950 PF03023 Lipid II flippase MurJ FDM99_02955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDM99_02955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDM99_02960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDM99_02960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDM99_02965 PF02706 Chain length determinant protein FDM99_02965 PF13807 G-rich domain on putative tyrosine kinase FDM99_02965 PF13614 AAA domain FDM99_02970 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDM99_02975 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FDM99_02975 PF02563 Polysaccharide biosynthesis/export protein FDM99_02975 PF10531 SLBB domain FDM99_02980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDM99_02980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDM99_02980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDM99_02985 PF02350 UDP-N-acetylglucosamine 2-epimerase FDM99_02990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDM99_02990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDM99_02990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDM99_03020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FDM99_03020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDM99_03035 PF02397 Bacterial sugar transferase FDM99_03040 PF14602 Hexapeptide repeat of succinyl-transferase FDM99_03040 PF17836 PglD N-terminal domain FDM99_03040 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_03045 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDM99_03050 PF02719 Polysaccharide biosynthesis protein FDM99_03055 PF00483 Nucleotidyl transferase FDM99_03060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDM99_03060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDM99_03060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDM99_03065 PF00342 Phosphoglucose isomerase FDM99_03075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDM99_03075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDM99_03075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDM99_03075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDM99_03080 PF02652 L-lactate permease FDM99_03085 PF07729 FCD domain FDM99_03085 PF00392 Bacterial regulatory proteins, gntR family FDM99_03090 PF01070 FMN-dependent dehydrogenase FDM99_03095 PF09330 D-lactate dehydrogenase, membrane binding FDM99_03095 PF01565 FAD binding domain FDM99_03100 PF00155 Aminotransferase class I and II FDM99_03110 PF00392 Bacterial regulatory proteins, gntR family FDM99_03110 PF07729 FCD domain FDM99_03120 PF00285 Citrate synthase, C-terminal domain FDM99_03125 PF00330 Aconitase family (aconitate hydratase) FDM99_03125 PF00694 Aconitase C-terminal domain FDM99_03165 PF00872 Transposase, Mutator family FDM99_03180 PF00849 RNA pseudouridylate synthase FDM99_03195 PF07715 TonB-dependent Receptor Plug Domain FDM99_03195 PF00593 TonB dependent receptor FDM99_03205 PF01037 Lrp/AsnC ligand binding domain FDM99_03210 PF01266 FAD dependent oxidoreductase FDM99_03215 PF01168 Alanine racemase, N-terminal domain FDM99_03215 PF00842 Alanine racemase, C-terminal domain FDM99_03220 PF01042 Endoribonuclease L-PSP FDM99_03225 PF00324 Amino acid permease FDM99_03230 PF00324 Amino acid permease FDM99_03240 PF00171 Aldehyde dehydrogenase family FDM99_03245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDM99_03245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDM99_03250 PF13193 AMP-binding enzyme C-terminal domain FDM99_03250 PF00501 AMP-binding enzyme FDM99_03255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_03255 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_03255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_03260 PF00378 Enoyl-CoA hydratase/isomerase FDM99_03265 PF00378 Enoyl-CoA hydratase/isomerase FDM99_03275 PF03472 Autoinducer binding domain FDM99_03275 PF00196 Bacterial regulatory proteins, luxR family FDM99_03280 PF16363 GDP-mannose 4,6 dehydratase FDM99_03285 PF01648 4'-phosphopantetheinyl transferase superfamily FDM99_03300 PF01722 BolA-like protein FDM99_03310 PF13614 AAA domain FDM99_03325 PF09335 SNARE associated Golgi protein FDM99_03330 PF07681 DoxX FDM99_03335 PF04286 Protein of unknown function (DUF445) FDM99_03340 PF02540 NAD synthase FDM99_03340 PF00117 Glutamine amidotransferase class-I FDM99_03340 PF00958 GMP synthase C terminal domain FDM99_03345 PF13427 Domain of unknown function (DUF4111) FDM99_03345 PF01909 Nucleotidyltransferase domain FDM99_03350 PF03551 Transcriptional regulator PadR-like family FDM99_03360 PF02678 Pirin FDM99_03360 PF05726 Pirin C-terminal cupin domain FDM99_03380 PF05746 DALR anticodon binding domain FDM99_03380 PF03485 Arginyl tRNA synthetase N terminal domain FDM99_03380 PF00750 tRNA synthetases class I (R) FDM99_03385 PF00390 Malic enzyme, N-terminal domain FDM99_03385 PF03949 Malic enzyme, NAD binding domain FDM99_03390 PF04261 Dyp-type peroxidase family FDM99_03395 PF01810 LysE type translocator FDM99_03400 PF00950 ABC 3 transport family FDM99_03405 PF00005 ABC transporter FDM99_03425 PF00119 ATP synthase A chain FDM99_03430 PF00137 ATP synthase subunit C FDM99_03435 PF00430 ATP synthase B/B' CF(0) FDM99_03440 PF00213 ATP synthase delta (OSCP) subunit FDM99_03445 PF00306 ATP synthase alpha/beta chain, C terminal domain FDM99_03445 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDM99_03445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDM99_03450 PF00231 ATP synthase FDM99_03455 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDM99_03455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDM99_03460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDM99_03470 PF00255 Glutathione peroxidase FDM99_03480 PF07690 Major Facilitator Superfamily FDM99_03485 PF00440 Bacterial regulatory proteins, tetR family FDM99_03490 PF00892 EamA-like transporter family FDM99_03495 PF01300 Telomere recombination FDM99_03500 PF02481 DNA recombination-mediator protein A FDM99_03500 PF17782 DprA winged helix domain FDM99_03510 PF01327 Polypeptide deformylase FDM99_03535 PF00440 Bacterial regulatory proteins, tetR family FDM99_03570 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_03580 PF03358 NADPH-dependent FMN reductase FDM99_03600 PF11842 Domain of unknown function (DUF3362) FDM99_03600 PF08497 Radical SAM N-terminal FDM99_03600 PF04055 Radical SAM superfamily FDM99_03615 PF11798 IMS family HHH motif FDM99_03615 PF00817 impB/mucB/samB family FDM99_03615 PF11799 impB/mucB/samB family C-terminal domain FDM99_03625 PF07690 Major Facilitator Superfamily FDM99_03630 PF03641 Possible lysine decarboxylase FDM99_03635 PF03471 Transporter associated domain FDM99_03635 PF03741 Integral membrane protein TerC family FDM99_03640 PF02810 SEC-C motif FDM99_03645 PF03458 UPF0126 domain FDM99_03650 PF07690 Major Facilitator Superfamily FDM99_03655 PF03989 DNA gyrase C-terminal domain, beta-propeller FDM99_03655 PF00521 DNA gyrase/topoisomerase IV, subunit A FDM99_03660 PF13193 AMP-binding enzyme C-terminal domain FDM99_03660 PF00501 AMP-binding enzyme FDM99_03675 PF00719 Inorganic pyrophosphatase FDM99_03680 PF03573 outer membrane porin, OprD family FDM99_03690 PF00701 Dihydrodipicolinate synthetase family FDM99_03700 PF00392 Bacterial regulatory proteins, gntR family FDM99_03700 PF00155 Aminotransferase class I and II FDM99_03705 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDM99_03705 PF01078 Magnesium chelatase, subunit ChlI FDM99_03715 PF00543 Nitrogen regulatory protein P-II FDM99_03720 PF00909 Ammonium Transporter Family FDM99_03725 PF03477 ATP cone domain FDM99_03730 PF01872 RibD C-terminal domain FDM99_03730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDM99_03740 PF00677 Lumazine binding domain FDM99_03760 PF00883 Cytosol aminopeptidase family, catalytic domain FDM99_03760 PF02789 Cytosol aminopeptidase family, N-terminal domain FDM99_03770 PF03739 Lipopolysaccharide export system permease LptF/LptG FDM99_03775 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FDM99_03775 PF01676 Metalloenzyme superfamily FDM99_03780 PF03572 Peptidase family S41 FDM99_03780 PF00595 PDZ domain FDM99_03785 PF02954 Bacterial regulatory protein, Fis family FDM99_03785 PF00072 Response regulator receiver domain FDM99_03785 PF00158 Sigma-54 interaction domain FDM99_03795 PF00196 Bacterial regulatory proteins, luxR family FDM99_03795 PF00072 Response regulator receiver domain FDM99_03800 PF00768 D-alanyl-D-alanine carboxypeptidase FDM99_03805 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_03810 PF01842 ACT domain FDM99_03810 PF00742 Homoserine dehydrogenase FDM99_03810 PF03447 Homoserine dehydrogenase, NAD binding domain FDM99_03815 PF13098 Thioredoxin-like domain FDM99_03815 PF10411 Disulfide bond isomerase protein N-terminus FDM99_03820 PF02899 Phage integrase, N-terminal SAM-like domain FDM99_03820 PF00589 Phage integrase family FDM99_03830 PF07664 Ferrous iron transport protein B C terminus FDM99_03830 PF02421 Ferrous iron transport protein B FDM99_03830 PF07670 Nucleoside recognition FDM99_03840 PF02875 Mur ligase family, glutamate ligase domain FDM99_03840 PF08245 Mur ligase middle domain FDM99_03845 PF01098 Cell cycle protein FDM99_03850 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDM99_03855 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDM99_03860 PF00149 Calcineurin-like phosphoesterase FDM99_03865 PF00293 NUDIX domain FDM99_03870 PF01964 Radical SAM ThiC family FDM99_03870 PF13667 ThiC-associated domain FDM99_03885 PF00892 EamA-like transporter family FDM99_03895 PF01895 PhoU domain FDM99_03900 PF04362 Bacterial Fe(2+) trafficking FDM99_03905 PF14698 Argininosuccinate lyase C-terminal FDM99_03905 PF00206 Lyase FDM99_03910 PF07694 5TMR of 5TMR-LYT FDM99_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_03910 PF06580 Histidine kinase FDM99_03915 PF00072 Response regulator receiver domain FDM99_03915 PF04397 LytTr DNA-binding domain FDM99_03920 PF03900 Porphobilinogen deaminase, C-terminal domain FDM99_03920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDM99_03945 PF00816 H-NS histone family FDM99_03960 PF03958 Bacterial type II/III secretion system short domain FDM99_03960 PF00263 Bacterial type II and III secretion system protein FDM99_03965 PF00498 FHA domain FDM99_03965 PF12401 Protein of unknown function (DUF2662) FDM99_03970 PF13419 Haloacid dehalogenase-like hydrolase FDM99_03975 PF04715 Anthranilate synthase component I, N terminal region FDM99_03975 PF00425 chorismate binding enzyme FDM99_04000 PF03144 Elongation factor Tu domain 2 FDM99_04000 PF03143 Elongation factor Tu C-terminal domain FDM99_04000 PF00009 Elongation factor Tu GTP binding domain FDM99_04010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDM99_04015 PF02357 Transcription termination factor nusG FDM99_04015 PF00467 KOW motif FDM99_04020 PF00298 Ribosomal protein L11, RNA binding domain FDM99_04020 PF03946 Ribosomal protein L11, N-terminal domain FDM99_04025 PF00687 Ribosomal protein L1p/L10e family FDM99_04030 PF00466 Ribosomal protein L10 FDM99_04035 PF16320 Ribosomal protein L7/L12 dimerisation domain FDM99_04035 PF00542 Ribosomal protein L7/L12 C-terminal domain FDM99_04040 PF00562 RNA polymerase Rpb2, domain 6 FDM99_04040 PF10385 RNA polymerase beta subunit external 1 domain FDM99_04040 PF04561 RNA polymerase Rpb2, domain 2 FDM99_04040 PF04565 RNA polymerase Rpb2, domain 3 FDM99_04040 PF04563 RNA polymerase beta subunit FDM99_04040 PF04560 RNA polymerase Rpb2, domain 7 FDM99_04045 PF04983 RNA polymerase Rpb1, domain 3 FDM99_04045 PF04997 RNA polymerase Rpb1, domain 1 FDM99_04045 PF04998 RNA polymerase Rpb1, domain 5 FDM99_04045 PF05000 RNA polymerase Rpb1, domain 4 FDM99_04045 PF00623 RNA polymerase Rpb1, domain 2 FDM99_04070 PF13726 Na+-H+ antiporter family FDM99_04070 PF03553 Na+/H+ antiporter family FDM99_04085 PF00183 Hsp90 protein FDM99_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_04100 PF01323 DSBA-like thioredoxin domain FDM99_04110 PF00376 MerR family regulatory protein FDM99_04110 PF09278 MerR, DNA binding FDM99_04130 PF00108 Thiolase, N-terminal domain FDM99_04130 PF02803 Thiolase, C-terminal domain FDM99_04135 PF00378 Enoyl-CoA hydratase/isomerase FDM99_04135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDM99_04135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDM99_04155 PF01541 GIY-YIG catalytic domain FDM99_04155 PF02151 UvrB/uvrC motif FDM99_04155 PF08459 UvrC Helix-hairpin-helix N-terminal FDM99_04165 PF01066 CDP-alcohol phosphatidyltransferase FDM99_04170 PF12833 Helix-turn-helix domain FDM99_04170 PF02805 Metal binding domain of Ada FDM99_04170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDM99_04170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDM99_04195 PF13533 Biotin-lipoyl like FDM99_04200 PF03652 Holliday junction resolvase FDM99_04205 PF02622 Uncharacterized ACR, COG1678 FDM99_04210 PF02463 RecF/RecN/SMC N terminal domain FDM99_04220 PF06865 Pyrimidine/purine nucleoside phosphorylase FDM99_04225 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDM99_04225 PF00588 SpoU rRNA Methylase family FDM99_04235 PF01121 Dephospho-CoA kinase FDM99_04240 PF01478 Type IV leader peptidase family FDM99_04240 PF06750 Bacterial Peptidase A24 N-terminal domain FDM99_04245 PF00482 Type II secretion system (T2SS), protein F FDM99_04250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDM99_04250 PF00437 Type II/IV secretion system protein FDM99_04255 PF00121 Triosephosphate isomerase FDM99_04260 PF03840 Preprotein translocase SecG subunit FDM99_04280 PF02576 RimP N-terminal domain FDM99_04280 PF17384 RimP C-terminal SH3 domain FDM99_04290 PF00009 Elongation factor Tu GTP binding domain FDM99_04290 PF08364 Bacterial translation initiation factor IF-2 associated region FDM99_04290 PF04760 Translation initiation factor IF-2, N-terminal region FDM99_04290 PF11987 Translation-initiation factor 2 FDM99_04295 PF02033 Ribosome-binding factor A FDM99_04305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FDM99_04315 PF00361 Proton-conducting membrane transporter FDM99_04320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FDM99_04325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FDM99_04325 PF00361 Proton-conducting membrane transporter FDM99_04325 PF13244 Domain of unknown function (DUF4040) FDM99_04325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FDM99_04340 PF01502 Phosphoribosyl-AMP cyclohydrolase FDM99_04345 PF01494 FAD binding domain FDM99_04350 PF03109 ABC1 family FDM99_04360 PF01209 ubiE/COQ5 methyltransferase family FDM99_04370 PF03976 Polyphosphate kinase 2 (PPK2) FDM99_04380 PF17946 RecC C-terminal domain FDM99_04385 PF00580 UvrD/REP helicase N-terminal domain FDM99_04385 PF12705 PD-(D/E)XK nuclease superfamily FDM99_04385 PF13361 UvrD-like helicase C-terminal domain FDM99_04390 PF13538 UvrD-like helicase C-terminal domain FDM99_04400 PF00312 Ribosomal protein S15 FDM99_04405 PF00575 S1 RNA binding domain FDM99_04405 PF01138 3' exoribonuclease family, domain 1 FDM99_04405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FDM99_04405 PF00013 KH domain FDM99_04405 PF03725 3' exoribonuclease family, domain 2 FDM99_04410 PF01544 CorA-like Mg2+ transporter protein FDM99_04420 PF00226 DnaJ domain FDM99_04420 PF01556 DnaJ C terminal domain FDM99_04430 PF01430 Hsp33 protein FDM99_04435 PF02254 TrkA-N domain FDM99_04435 PF00999 Sodium/hydrogen exchanger family FDM99_04440 PF17764 3′ DNA-binding domain (3′BD) FDM99_04440 PF18074 Primosomal protein N C-terminal domain FDM99_04440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FDM99_04440 PF00271 Helicase conserved C-terminal domain FDM99_04440 PF00270 DEAD/DEAH box helicase FDM99_04445 PF00482 Type II secretion system (T2SS), protein F FDM99_04450 PF08334 Type II secretion system (T2SS), protein G FDM99_04450 PF07963 Prokaryotic N-terminal methylation motif FDM99_04460 PF01588 Putative tRNA binding domain FDM99_04465 PF00795 Carbon-nitrogen hydrolase FDM99_04470 PF03471 Transporter associated domain FDM99_04470 PF00571 CBS domain FDM99_04475 PF01206 Sulfurtransferase TusA FDM99_04495 PF01177 Asp/Glu/Hydantoin racemase FDM99_04505 PF00762 Ferrochelatase FDM99_04510 PF00753 Metallo-beta-lactamase superfamily FDM99_04515 PF03884 DNA gyrase inhibitor YacG FDM99_04535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDM99_04550 PF01197 Ribosomal protein L31 FDM99_04555 PF03109 ABC1 family FDM99_04560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDM99_04560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_04565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDM99_04565 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_04565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_04570 PF01554 MatE FDM99_04580 PF04055 Radical SAM superfamily FDM99_04580 PF06969 HemN C-terminal domain FDM99_04585 PF00106 short chain dehydrogenase FDM99_04590 PF03466 LysR substrate binding domain FDM99_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_04600 PF13193 AMP-binding enzyme C-terminal domain FDM99_04600 PF00501 AMP-binding enzyme FDM99_04605 PF12111 Polyribonucleotide phosphorylase C terminal FDM99_04605 PF10150 Ribonuclease E/G family FDM99_04605 PF00575 S1 RNA binding domain FDM99_04615 PF01479 S4 domain FDM99_04615 PF00849 RNA pseudouridylate synthase FDM99_04620 PF13419 Haloacid dehalogenase-like hydrolase FDM99_04625 PF08279 HTH domain FDM99_04625 PF13280 WYL domain FDM99_04630 PF02798 Glutathione S-transferase, N-terminal domain FDM99_04640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_04640 PF03466 LysR substrate binding domain FDM99_04645 PF12706 Beta-lactamase superfamily domain FDM99_04650 PF00141 Peroxidase FDM99_04655 PF02896 PEP-utilising enzyme, TIM barrel domain FDM99_04655 PF00391 PEP-utilising enzyme, mobile domain FDM99_04655 PF01590 GAF domain FDM99_04655 PF05524 PEP-utilising enzyme, N-terminal FDM99_04660 PF00293 NUDIX domain FDM99_04680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_04680 PF03466 LysR substrate binding domain FDM99_04690 PF00330 Aconitase family (aconitate hydratase) FDM99_04695 PF00694 Aconitase C-terminal domain FDM99_04705 PF00180 Isocitrate/isopropylmalate dehydrogenase FDM99_04720 PF01176 Translation initiation factor 1A / IF-1 FDM99_04730 PF01416 tRNA pseudouridine synthase FDM99_04750 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDM99_04750 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDM99_04760 PF00375 Sodium:dicarboxylate symporter family FDM99_04775 PF01810 LysE type translocator FDM99_04790 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_04790 PF00107 Zinc-binding dehydrogenase FDM99_04795 PF01638 HxlR-like helix-turn-helix FDM99_04805 PF01131 DNA topoisomerase FDM99_04805 PF08272 Topoisomerase I zinc-ribbon-like FDM99_04805 PF01751 Toprim domain FDM99_04805 PF01396 Topoisomerase DNA binding C4 zinc finger FDM99_04820 PF13361 UvrD-like helicase C-terminal domain FDM99_04820 PF00580 UvrD/REP helicase N-terminal domain FDM99_04825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FDM99_04845 PF02254 TrkA-N domain FDM99_04845 PF00999 Sodium/hydrogen exchanger family FDM99_04850 PF00471 Ribosomal protein L33 FDM99_04855 PF00830 Ribosomal L28 family FDM99_04860 PF00171 Aldehyde dehydrogenase family FDM99_04900 PF01625 Peptide methionine sulfoxide reductase FDM99_04910 PF00186 Dihydrofolate reductase FDM99_04915 PF00303 Thymidylate synthase FDM99_04955 PF02416 mttA/Hcf106 family FDM99_04960 PF02416 mttA/Hcf106 family FDM99_04970 PF01725 Ham1 family FDM99_05005 PF02254 TrkA-N domain FDM99_05005 PF00999 Sodium/hydrogen exchanger family FDM99_05015 PF00830 Ribosomal L28 family FDM99_05020 PF00171 Aldehyde dehydrogenase family FDM99_05030 PF01842 ACT domain FDM99_05030 PF00551 Formyl transferase FDM99_05040 PF01618 MotA/TolQ/ExbB proton channel family FDM99_05050 PF01625 Peptide methionine sulfoxide reductase FDM99_05065 PF00303 Thymidylate synthase FDM99_05080 PF01790 Prolipoprotein diacylglyceryl transferase FDM99_05100 PF00902 Sec-independent protein translocase protein (TatC) FDM99_05105 PF02416 mttA/Hcf106 family FDM99_05110 PF02416 mttA/Hcf106 family FDM99_05120 PF01725 Ham1 family FDM99_05130 PF07021 Methionine biosynthesis protein MetW FDM99_05130 PF00561 alpha/beta hydrolase fold FDM99_05135 PF00561 alpha/beta hydrolase fold FDM99_05145 PF13640 2OG-Fe(II) oxygenase superfamily FDM99_05145 PF18331 PKHD-type hydroxylase C-terminal domain FDM99_05150 PF07715 TonB-dependent Receptor Plug Domain FDM99_05150 PF00593 TonB dependent receptor FDM99_05155 PF05697 Bacterial trigger factor protein (TF) FDM99_05155 PF05698 Bacterial trigger factor protein (TF) C-terminus FDM99_05155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDM99_05160 PF00574 Clp protease FDM99_05165 PF07724 AAA domain (Cdc48 subfamily) FDM99_05165 PF10431 C-terminal, D2-small domain, of ClpB protein FDM99_05165 PF06689 ClpX C4-type zinc finger FDM99_05180 PF05683 Fumarase C-terminus FDM99_05180 PF05681 Fumarate hydratase (Fumerase) FDM99_05185 PF07085 DRTGG domain FDM99_05185 PF01515 Phosphate acetyl/butaryl transferase FDM99_05190 PF00871 Acetokinase family FDM99_05195 PF00920 Dehydratase family FDM99_05200 PF01081 KDPG and KHG aldolase FDM99_05205 PF02447 GntP family permease FDM99_05210 PF01202 Shikimate kinase FDM99_05215 PF00171 Aldehyde dehydrogenase family FDM99_05220 PF00171 Aldehyde dehydrogenase family FDM99_05225 PF00561 alpha/beta hydrolase fold FDM99_05235 PF00933 Glycosyl hydrolase family 3 N terminal domain FDM99_05240 PF03572 Peptidase family S41 FDM99_05240 PF17804 Tail specific protease N-terminal domain FDM99_05240 PF00595 PDZ domain FDM99_05240 PF11818 C-terminal domain of tail specific protease (DUF3340) FDM99_05245 PF00534 Glycosyl transferases group 1 FDM99_05245 PF13439 Glycosyltransferase Family 4 FDM99_05250 PF01569 PAP2 superfamily FDM99_05255 PF04384 Iron-sulphur cluster assembly FDM99_05260 PF00334 Nucleoside diphosphate kinase FDM99_05265 PF04055 Radical SAM superfamily FDM99_05275 PF13464 Domain of unknown function (DUF4115) FDM99_05280 PF04551 GcpE protein FDM99_05285 PF13393 Histidyl-tRNA synthetase FDM99_05285 PF03129 Anticodon binding domain FDM99_05295 PF13360 PQQ-like domain FDM99_05300 PF01926 50S ribosome-binding GTPase FDM99_05300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDM99_05315 PF00550 Phosphopantetheine attachment site FDM99_05320 PF00550 Phosphopantetheine attachment site FDM99_05330 PF00501 AMP-binding enzyme FDM99_05330 PF13193 AMP-binding enzyme C-terminal domain FDM99_05335 PF00535 Glycosyl transferase family 2 FDM99_05345 PF00221 Aromatic amino acid lyase FDM99_05365 PF04820 Tryptophan halogenase FDM99_05375 PF02801 Beta-ketoacyl synthase, C-terminal domain FDM99_05375 PF00109 Beta-ketoacyl synthase, N-terminal domain FDM99_05390 PF00109 Beta-ketoacyl synthase, N-terminal domain FDM99_05390 PF02801 Beta-ketoacyl synthase, C-terminal domain FDM99_05405 PF02556 Preprotein translocase subunit SecB FDM99_05410 PF00462 Glutaredoxin FDM99_05420 PF03193 RsgA GTPase FDM99_05425 PF00929 Exonuclease FDM99_05440 PF02321 Outer membrane efflux protein FDM99_05445 PF12704 MacB-like periplasmic core domain FDM99_05445 PF02687 FtsX-like permease family FDM99_05445 PF00005 ABC transporter FDM99_05450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_05465 PF08264 Anticodon-binding domain of tRNA FDM99_05465 PF00133 tRNA synthetases class I (I, L, M and V) FDM99_05465 PF13603 Leucyl-tRNA synthetase, Domain 2 FDM99_05465 PF09334 tRNA synthetases class I (M) FDM99_05475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDM99_05475 PF00205 Thiamine pyrophosphate enzyme, central domain FDM99_05475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDM99_05480 PF10369 Small subunit of acetolactate synthase FDM99_05485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FDM99_05485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FDM99_05490 PF00990 Diguanylate cyclase, GGDEF domain FDM99_05490 PF00563 EAL domain FDM99_05490 PF03707 Bacterial signalling protein N terminal repeat FDM99_05515 PF16658 Class II release factor RF3, C-terminal domain FDM99_05515 PF03144 Elongation factor Tu domain 2 FDM99_05515 PF00009 Elongation factor Tu GTP binding domain FDM99_05530 PF01026 TatD related DNase FDM99_05535 PF00330 Aconitase family (aconitate hydratase) FDM99_05535 PF00694 Aconitase C-terminal domain FDM99_05540 PF00899 ThiF family FDM99_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_05550 PF03466 LysR substrate binding domain FDM99_05560 PF01207 Dihydrouridine synthase (Dus) FDM99_05565 PF00589 Phage integrase family FDM99_05590 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_05590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDM99_05610 PF02627 Carboxymuconolactone decarboxylase family FDM99_05620 PF00085 Thioredoxin FDM99_05625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_05645 PF02322 Cytochrome bd terminal oxidase subunit II FDM99_05650 PF01654 Cytochrome bd terminal oxidase subunit I FDM99_05670 PF07715 TonB-dependent Receptor Plug Domain FDM99_05670 PF00593 TonB dependent receptor FDM99_05680 PF07690 Major Facilitator Superfamily FDM99_05690 PF00892 EamA-like transporter family FDM99_05695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDM99_05695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDM99_05700 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDM99_05705 PF02233 NAD(P) transhydrogenase beta subunit FDM99_05710 PF00106 short chain dehydrogenase FDM99_05725 PF01261 Xylose isomerase-like TIM barrel FDM99_05730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDM99_05730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDM99_05735 PF00378 Enoyl-CoA hydratase/isomerase FDM99_05740 PF00512 His Kinase A (phospho-acceptor) domain FDM99_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_05740 PF00672 HAMP domain FDM99_05740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDM99_05740 PF00072 Response regulator receiver domain FDM99_05740 PF01627 Hpt domain FDM99_05745 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_05755 PF05958 tRNA (Uracil-5-)-methyltransferase FDM99_05760 PF13291 ACT domain FDM99_05760 PF02824 TGS domain FDM99_05760 PF04607 Region found in RelA / SpoT proteins FDM99_05770 PF03819 MazG nucleotide pyrophosphohydrolase domain FDM99_05780 PF12627 Probable RNA and SrmB- binding site of polymerase A FDM99_05780 PF01743 Poly A polymerase head domain FDM99_05780 PF12626 Polymerase A arginine-rich C-terminus FDM99_05785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDM99_05790 PF02548 Ketopantoate hydroxymethyltransferase FDM99_05795 PF02569 Pantoate-beta-alanine ligase FDM99_05800 PF03668 P-loop ATPase protein family FDM99_05805 PF00381 PTS HPr component phosphorylation site FDM99_05810 PF04751 Protein of unknown function (DUF615) FDM99_05815 PF13193 AMP-binding enzyme C-terminal domain FDM99_05815 PF00501 AMP-binding enzyme FDM99_05820 PF02824 TGS domain FDM99_05820 PF03129 Anticodon binding domain FDM99_05820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDM99_05820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDM99_05825 PF00707 Translation initiation factor IF-3, C-terminal domain FDM99_05825 PF05198 Translation initiation factor IF-3, N-terminal domain FDM99_05830 PF02798 Glutathione S-transferase, N-terminal domain FDM99_05830 PF00043 Glutathione S-transferase, C-terminal domain FDM99_05835 PF09335 SNARE associated Golgi protein FDM99_05840 PF07690 Major Facilitator Superfamily FDM99_05845 PF01632 Ribosomal protein L35 FDM99_05850 PF00453 Ribosomal protein L20 FDM99_05870 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FDM99_05870 PF01409 tRNA synthetases class II core domain (F) FDM99_05880 PF00216 Bacterial DNA-binding protein FDM99_05895 PF07498 Rho termination factor, N-terminal domain FDM99_05895 PF07497 Rho termination factor, RNA-binding domain FDM99_05895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDM99_05900 PF00085 Thioredoxin FDM99_05905 PF02541 Ppx/GppA phosphatase family FDM99_05910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FDM99_05915 PF09179 TilS substrate binding domain FDM99_05915 PF11734 TilS substrate C-terminal domain FDM99_05915 PF01171 PP-loop family FDM99_05920 PF03807 NADP oxidoreductase coenzyme F420-dependent FDM99_05920 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDM99_05925 PF02325 YGGT family FDM99_05930 PF01612 3'-5' exonuclease FDM99_05930 PF00476 DNA polymerase family A FDM99_05930 PF01367 5'-3' exonuclease, C-terminal SAM fold FDM99_05930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDM99_05950 PF00437 Type II/IV secretion system protein FDM99_05955 PF02566 OsmC-like protein FDM99_05960 PF01047 MarR family FDM99_05970 PF00795 Carbon-nitrogen hydrolase FDM99_06015 PF04963 Sigma-54 factor, core binding domain FDM99_06015 PF00309 Sigma-54 factor, Activator interacting domain (AID) FDM99_06015 PF04552 Sigma-54, DNA binding domain FDM99_06020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDM99_06025 PF01722 BolA-like protein FDM99_06030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDM99_06035 PF01634 ATP phosphoribosyltransferase FDM99_06040 PF00815 Histidinol dehydrogenase FDM99_06045 PF00155 Aminotransferase class I and II FDM99_06050 PF00425 chorismate binding enzyme FDM99_06050 PF04715 Anthranilate synthase component I, N terminal region FDM99_06070 PF00293 NUDIX domain FDM99_06075 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_06080 PF00814 Glycoprotease family FDM99_06085 PF04445 Putative SAM-dependent methyltransferase FDM99_06095 PF00756 Putative esterase FDM99_06105 PF00834 Ribulose-phosphate 3 epimerase family FDM99_06120 PF07731 Multicopper oxidase FDM99_06120 PF00394 Multicopper oxidase FDM99_06120 PF07732 Multicopper oxidase FDM99_06135 PF00893 Small Multidrug Resistance protein FDM99_06140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDM99_06140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDM99_06145 PF01960 ArgJ family FDM99_06150 PF02445 Quinolinate synthetase A protein FDM99_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_06185 PF03466 LysR substrate binding domain FDM99_06190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_06190 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_06190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_06195 PF07690 Major Facilitator Superfamily FDM99_06200 PF02515 CoA-transferase family III FDM99_06210 PF14537 Cytochrome c3 FDM99_06210 PF00890 FAD binding domain FDM99_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_06215 PF03466 LysR substrate binding domain FDM99_06225 PF07690 Major Facilitator Superfamily FDM99_06235 PF03466 LysR substrate binding domain FDM99_06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_06245 PF01546 Peptidase family M20/M25/M40 FDM99_06245 PF07687 Peptidase dimerisation domain FDM99_06250 PF12833 Helix-turn-helix domain FDM99_06250 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDM99_06265 PF01717 Cobalamin-independent synthase, Catalytic domain FDM99_06265 PF08267 Cobalamin-independent synthase, N-terminal domain FDM99_06270 PF01613 Flavin reductase like domain FDM99_06315 PF01011 PQQ enzyme repeat FDM99_06315 PF13360 PQQ-like domain FDM99_06405 PF00268 Ribonucleotide reductase, small chain FDM99_06415 PF03477 ATP cone domain FDM99_06415 PF02867 Ribonucleotide reductase, barrel domain FDM99_06415 PF00317 Ribonucleotide reductase, all-alpha domain FDM99_06425 PF00072 Response regulator receiver domain FDM99_06425 PF00486 Transcriptional regulatory protein, C terminal FDM99_06430 PF00512 His Kinase A (phospho-acceptor) domain FDM99_06430 PF00672 HAMP domain FDM99_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_06445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FDM99_06450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FDM99_06455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FDM99_06455 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FDM99_06465 PF10531 SLBB domain FDM99_06465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FDM99_06465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FDM99_06475 PF00146 NADH dehydrogenase FDM99_06480 PF12838 4Fe-4S dicluster domain FDM99_06485 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FDM99_06490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FDM99_06495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FDM99_06495 PF00361 Proton-conducting membrane transporter FDM99_06500 PF00361 Proton-conducting membrane transporter FDM99_06505 PF00361 Proton-conducting membrane transporter FDM99_06515 PF00313 'Cold-shock' DNA-binding domain FDM99_06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_06520 PF03466 LysR substrate binding domain FDM99_06525 PF00175 Oxidoreductase NAD-binding domain FDM99_06525 PF00970 Oxidoreductase FAD-binding domain FDM99_06540 PF05552 Conserved TM helix FDM99_06555 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_06560 PF13533 Biotin-lipoyl like FDM99_06590 PF09334 tRNA synthetases class I (M) FDM99_06590 PF01588 Putative tRNA binding domain FDM99_06600 PF10609 NUBPL iron-transfer P-loop NTPase FDM99_06610 PF01048 Phosphorylase superfamily FDM99_06625 PF00692 dUTPase FDM99_06660 PF01207 Dihydrouridine synthase (Dus) FDM99_06670 PF02978 Signal peptide binding domain FDM99_06670 PF02881 SRP54-type protein, helical bundle domain FDM99_06670 PF00448 SRP54-type protein, GTPase domain FDM99_06675 PF03309 Type III pantothenate kinase FDM99_06685 PF01925 Sulfite exporter TauE/SafE FDM99_06695 PF06470 SMC proteins Flexible Hinge Domain FDM99_06695 PF02463 RecF/RecN/SMC N terminal domain FDM99_06705 PF00533 BRCA1 C Terminus (BRCT) domain FDM99_06705 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FDM99_06705 PF12826 Helix-hairpin-helix motif FDM99_06705 PF01653 NAD-dependent DNA ligase adenylation domain FDM99_06705 PF03120 NAD-dependent DNA ligase OB-fold domain FDM99_06710 PF00210 Ferritin-like domain FDM99_06715 PF07690 Major Facilitator Superfamily FDM99_06720 PF00982 Glycosyltransferase family 20 FDM99_06725 PF02358 Trehalose-phosphatase FDM99_06730 PF12697 Alpha/beta hydrolase family FDM99_06730 PF08241 Methyltransferase domain FDM99_06735 PF06968 Biotin and Thiamin Synthesis associated domain FDM99_06735 PF00202 Aminotransferase class-III FDM99_06735 PF04055 Radical SAM superfamily FDM99_06740 PF00155 Aminotransferase class I and II FDM99_06755 PF01479 S4 domain FDM99_06755 PF00849 RNA pseudouridylate synthase FDM99_06760 PF04079 Segregation and condensation complex subunit ScpB FDM99_06765 PF02616 Segregation and condensation protein ScpA FDM99_06775 PF04315 Elongation factor P hydroxylase FDM99_06780 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDM99_06785 PF01783 Ribosomal L32p protein family FDM99_06790 PF00698 Acyl transferase domain FDM99_06800 PF00550 Phosphopantetheine attachment site FDM99_06805 PF01476 LysM domain FDM99_06805 PF04972 BON domain FDM99_06810 PF02581 Thiamine monophosphate synthase FDM99_06810 PF08543 Phosphomethylpyrimidine kinase FDM99_06810 PF03070 TENA/THI-4/PQQC family FDM99_06820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDM99_06835 PF02261 Aspartate decarboxylase FDM99_06840 PF01195 Peptidyl-tRNA hydrolase FDM99_06845 PF01386 Ribosomal L25p family FDM99_06850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDM99_06850 PF14572 Phosphoribosyl synthetase-associated domain FDM99_06875 PF08544 GHMP kinases C terminal FDM99_06875 PF00288 GHMP kinases N terminal domain FDM99_06880 PF03550 Outer membrane lipoprotein LolB FDM99_06890 PF01488 Shikimate / quinate 5-dehydrogenase FDM99_06890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FDM99_06890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FDM99_06895 PF10410 DnaB-helicase binding domain of primase FDM99_06895 PF08278 DNA primase DnaG DnaB-binding FDM99_06895 PF08275 DNA primase catalytic core, N-terminal domain FDM99_06895 PF01807 CHC2 zinc finger FDM99_06900 PF13525 Outer membrane lipoprotein FDM99_06905 PF00849 RNA pseudouridylate synthase FDM99_06905 PF01479 S4 domain FDM99_06915 PF03358 NADPH-dependent FMN reductase FDM99_06920 PF01668 SmpB protein FDM99_06925 PF01467 Cytidylyltransferase-like FDM99_06930 PF00037 4Fe-4S binding domain FDM99_06950 PF03466 LysR substrate binding domain FDM99_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_06955 PF00180 Isocitrate/isopropylmalate dehydrogenase FDM99_06960 PF02028 BCCT, betaine/carnitine/choline family transporter FDM99_06965 PF07859 alpha/beta hydrolase fold FDM99_06970 PF00355 Rieske [2Fe-2S] domain FDM99_06970 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDM99_06975 PF00171 Aldehyde dehydrogenase family FDM99_06980 PF00175 Oxidoreductase NAD-binding domain FDM99_06980 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_06980 PF00970 Oxidoreductase FAD-binding domain FDM99_06995 PF02540 NAD synthase FDM99_06995 PF00795 Carbon-nitrogen hydrolase FDM99_07005 PF05726 Pirin C-terminal cupin domain FDM99_07005 PF02678 Pirin FDM99_07015 PF00109 Beta-ketoacyl synthase, N-terminal domain FDM99_07015 PF02801 Beta-ketoacyl synthase, C-terminal domain FDM99_07025 PF00164 Ribosomal protein S12/S23 FDM99_07030 PF00177 Ribosomal protein S7p/S5e FDM99_07035 PF03144 Elongation factor Tu domain 2 FDM99_07035 PF00009 Elongation factor Tu GTP binding domain FDM99_07035 PF03764 Elongation factor G, domain IV FDM99_07035 PF14492 Elongation Factor G, domain II FDM99_07035 PF00679 Elongation factor G C-terminus FDM99_07040 PF03143 Elongation factor Tu C-terminal domain FDM99_07040 PF03144 Elongation factor Tu domain 2 FDM99_07040 PF00009 Elongation factor Tu GTP binding domain FDM99_07055 PF00583 Acetyltransferase (GNAT) family FDM99_07060 PF04377 Arginine-tRNA-protein transferase, C terminus FDM99_07060 PF04376 Arginine-tRNA-protein transferase, N terminus FDM99_07065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FDM99_07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_07075 PF01580 FtsK/SpoIIIE family FDM99_07075 PF09397 Ftsk gamma domain FDM99_07075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FDM99_07075 PF17854 FtsK alpha domain FDM99_07080 PF01810 LysE type translocator FDM99_07090 PF03776 Septum formation topological specificity factor MinE FDM99_07095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FDM99_07100 PF03775 Septum formation inhibitor MinC, C-terminal domain FDM99_07110 PF01553 Acyltransferase FDM99_07115 PF13488 Glycine zipper FDM99_07115 PF00691 OmpA family FDM99_07120 PF00580 UvrD/REP helicase N-terminal domain FDM99_07120 PF13361 UvrD-like helicase C-terminal domain FDM99_07125 PF00692 dUTPase FDM99_07130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDM99_07130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDM99_07130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDM99_07130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDM99_07135 PF00696 Amino acid kinase family FDM99_07145 PF13230 Glutamine amidotransferases class-II FDM99_07150 PF01814 Hemerythrin HHE cation binding domain FDM99_07165 PF03658 RnfH family Ubiquitin FDM99_07170 PF04355 SmpA / OmlA family FDM99_07175 PF01475 Ferric uptake regulator family FDM99_07180 PF00437 Type II/IV secretion system protein FDM99_07185 PF00437 Type II/IV secretion system protein FDM99_07190 PF01168 Alanine racemase, N-terminal domain FDM99_07200 PF00149 Calcineurin-like phosphoesterase FDM99_07200 PF12320 Type 5 capsule protein repressor C-terminal domain FDM99_07225 PF01370 NAD dependent epimerase/dehydratase family FDM99_07225 PF08338 Domain of unknown function (DUF1731) FDM99_07230 PF01266 FAD dependent oxidoreductase FDM99_07235 PF00490 Delta-aminolevulinic acid dehydratase FDM99_07240 PF03061 Thioesterase superfamily FDM99_07245 PF13533 Biotin-lipoyl like FDM99_07250 PF07690 Major Facilitator Superfamily FDM99_07265 PF13356 Arm DNA-binding domain FDM99_07265 PF00589 Phage integrase family FDM99_07345 PF00083 Sugar (and other) transporter FDM99_07350 PF00701 Dihydrodipicolinate synthetase family FDM99_07400 PF13520 Amino acid permease FDM99_07405 PF02574 Homocysteine S-methyltransferase FDM99_07415 PF06039 Malate:quinone oxidoreductase (Mqo) FDM99_07420 PF00732 GMC oxidoreductase FDM99_07420 PF05199 GMC oxidoreductase FDM99_07425 PF00171 Aldehyde dehydrogenase family FDM99_07430 PF00440 Bacterial regulatory proteins, tetR family FDM99_07430 PF13977 BetI-type transcriptional repressor, C-terminal FDM99_07440 PF02028 BCCT, betaine/carnitine/choline family transporter FDM99_07450 PF03061 Thioesterase superfamily FDM99_07460 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDM99_07460 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDM99_07465 PF00375 Sodium:dicarboxylate symporter family FDM99_07470 PF07152 YaeQ protein FDM99_07475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDM99_07480 PF14883 Hypothetical glycosyl hydrolase family 13 FDM99_07480 PF01522 Polysaccharide deacetylase FDM99_07485 PF00535 Glycosyl transferase family 2 FDM99_07495 PF00378 Enoyl-CoA hydratase/isomerase FDM99_07510 PF01614 Bacterial transcriptional regulator FDM99_07510 PF09339 IclR helix-turn-helix domain FDM99_07525 PF00355 Rieske [2Fe-2S] domain FDM99_07540 PF14759 Reductase C-terminal FDM99_07540 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_07545 PF07690 Major Facilitator Superfamily FDM99_07555 PF12697 Alpha/beta hydrolase family FDM99_07565 PF03447 Homoserine dehydrogenase, NAD binding domain FDM99_07565 PF01958 Domain of unknown function DUF108 FDM99_07570 PF00171 Aldehyde dehydrogenase family FDM99_07575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDM99_07575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDM99_07575 PF00205 Thiamine pyrophosphate enzyme, central domain FDM99_07585 PF07690 Major Facilitator Superfamily FDM99_07590 PF01327 Polypeptide deformylase FDM99_07595 PF04960 Glutaminase FDM99_07600 PF12833 Helix-turn-helix domain FDM99_07600 PF02311 AraC-like ligand binding domain FDM99_07605 PF07690 Major Facilitator Superfamily FDM99_07610 PF01263 Aldose 1-epimerase FDM99_07625 PF03466 LysR substrate binding domain FDM99_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_07635 PF07690 Major Facilitator Superfamily FDM99_07640 PF00456 Transketolase, thiamine diphosphate binding domain FDM99_07645 PF02779 Transketolase, pyrimidine binding domain FDM99_07645 PF02780 Transketolase, C-terminal domain FDM99_07650 PF02310 B12 binding domain FDM99_07650 PF02965 Vitamin B12 dependent methionine synthase, activation domain FDM99_07650 PF02607 B12 binding domain FDM99_07650 PF00809 Pterin binding enzyme FDM99_07650 PF02574 Homocysteine S-methyltransferase FDM99_07655 PF01384 Phosphate transporter family FDM99_07660 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_07675 PF03781 Sulfatase-modifying factor enzyme 1 FDM99_07680 PF00884 Sulfatase FDM99_07690 PF01521 Iron-sulphur cluster biosynthesis FDM99_07690 PF01106 NifU-like domain FDM99_07695 PF00593 TonB dependent receptor FDM99_07695 PF07715 TonB-dependent Receptor Plug Domain FDM99_07705 PF00561 alpha/beta hydrolase fold FDM99_07710 PF00484 Carbonic anhydrase FDM99_07715 PF13472 GDSL-like Lipase/Acylhydrolase family FDM99_07720 PF00005 ABC transporter FDM99_07730 PF01694 Rhomboid family FDM99_07735 PF00912 Transglycosylase FDM99_07740 PF13089 Polyphosphate kinase N-terminal domain FDM99_07740 PF13090 Polyphosphate kinase C-terminal domain 2 FDM99_07740 PF02503 Polyphosphate kinase middle domain FDM99_07740 PF17941 Polyphosphate kinase C-terminal domain 1 FDM99_07755 PF03466 LysR substrate binding domain FDM99_07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_07760 PF00561 alpha/beta hydrolase fold FDM99_07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_07765 PF18113 Rubredoxin binding C-terminal domain FDM99_07770 PF00301 Rubredoxin FDM99_07785 PF01336 OB-fold nucleic acid binding domain FDM99_07785 PF00152 tRNA synthetases class II (D, K and N) FDM99_07790 PF14052 Capsule assembly protein Wzi FDM99_07800 PF01507 Phosphoadenosine phosphosulfate reductase family FDM99_07805 PF00009 Elongation factor Tu GTP binding domain FDM99_07820 PF03600 Citrate transporter FDM99_07830 PF01595 Cyclin M transmembrane N-terminal domain FDM99_07830 PF03471 Transporter associated domain FDM99_07830 PF00571 CBS domain FDM99_07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_07835 PF03466 LysR substrate binding domain FDM99_07840 PF00463 Isocitrate lyase family FDM99_07855 PF01774 UreD urease accessory protein FDM99_07860 PF00547 Urease, gamma subunit FDM99_07865 PF00699 Urease beta subunit FDM99_07870 PF00449 Urease alpha-subunit, N-terminal domain FDM99_07870 PF01979 Amidohydrolase family FDM99_07875 PF02814 UreE urease accessory protein, N-terminal domain FDM99_07875 PF05194 UreE urease accessory protein, C-terminal domain FDM99_07880 PF01730 UreF FDM99_07885 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDM99_07900 PF03717 Penicillin-binding Protein dimerisation domain FDM99_07900 PF00905 Penicillin binding protein transpeptidase domain FDM99_07915 PF05191 Adenylate kinase, active site lid FDM99_07925 PF00730 HhH-GPD superfamily base excision DNA repair protein FDM99_07925 PF00633 Helix-hairpin-helix motif FDM99_07925 PF10576 Iron-sulfur binding domain of endonuclease III FDM99_07930 PF04060 Putative Fe-S cluster FDM99_07935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDM99_07935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDM99_07945 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FDM99_07950 PF02590 Predicted SPOUT methyltransferase FDM99_07955 PF02190 ATP-dependent protease La (LON) substrate-binding domain FDM99_07955 PF05362 Lon protease (S16) C-terminal proteolytic domain FDM99_07955 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_07965 PF01812 5-formyltetrahydrofolate cyclo-ligase family FDM99_08005 PF05195 Aminopeptidase P, N-terminal domain FDM99_08005 PF00557 Metallopeptidase family M24 FDM99_08010 PF01494 FAD binding domain FDM99_08015 PF01494 FAD binding domain FDM99_08025 PF13411 MerR HTH family regulatory protein FDM99_08035 PF01810 LysE type translocator FDM99_08040 PF03466 LysR substrate binding domain FDM99_08040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_08050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDM99_08055 PF02021 Uncharacterised protein family UPF0102 FDM99_08060 PF04972 BON domain FDM99_08070 PF00293 NUDIX domain FDM99_08070 PF09297 NADH pyrophosphatase zinc ribbon domain FDM99_08090 PF00929 Exonuclease FDM99_08095 PF01464 Transglycosylase SLT domain FDM99_08095 PF01476 LysM domain FDM99_08095 PF01464 Transglycosylase SLT domain FDM99_08095 PF01476 LysM domain FDM99_08100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDM99_08105 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_08110 PF12911 N-terminal TM domain of oligopeptide transport permease C FDM99_08110 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_08115 PF00005 ABC transporter FDM99_08115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDM99_08120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_08120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_08125 PF07715 TonB-dependent Receptor Plug Domain FDM99_08125 PF00593 TonB dependent receptor FDM99_08135 PF00929 Exonuclease FDM99_08140 PF01979 Amidohydrolase family FDM99_08145 PF01590 GAF domain FDM99_08145 PF00990 Diguanylate cyclase, GGDEF domain FDM99_08145 PF00360 Phytochrome region FDM99_08145 PF00563 EAL domain FDM99_08150 PF00764 Arginosuccinate synthase FDM99_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_08155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_08165 PF03466 LysR substrate binding domain FDM99_08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_08170 PF03600 Citrate transporter FDM99_08200 PF02423 Ornithine cyclodeaminase/mu-crystallin family FDM99_08210 PF01266 FAD dependent oxidoreductase FDM99_08215 PF00196 Bacterial regulatory proteins, luxR family FDM99_08215 PF00072 Response regulator receiver domain FDM99_08225 PF12833 Helix-turn-helix domain FDM99_08235 PF01425 Amidase FDM99_08245 PF00850 Histone deacetylase domain FDM99_08255 PF02627 Carboxymuconolactone decarboxylase family FDM99_08260 PF00732 GMC oxidoreductase FDM99_08260 PF05199 GMC oxidoreductase FDM99_08265 PF09339 IclR helix-turn-helix domain FDM99_08265 PF01614 Bacterial transcriptional regulator FDM99_08270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDM99_08270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDM99_08275 PF00171 Aldehyde dehydrogenase family FDM99_08300 PF12697 Alpha/beta hydrolase family FDM99_08305 PF01494 FAD binding domain FDM99_08315 PF00171 Aldehyde dehydrogenase family FDM99_08330 PF05987 Bacterial protein of unknown function (DUF898) FDM99_08335 PF03180 NLPA lipoprotein FDM99_08350 PF16671 Actin cross-linking domain FDM99_08350 PF04717 Type VI secretion system, phage-baseplate injector FDM99_08355 PF03527 RHS protein FDM99_08355 PF05593 RHS Repeat FDM99_08425 PF00324 Amino acid permease FDM99_08430 PF01266 FAD dependent oxidoreductase FDM99_08435 PF00324 Amino acid permease FDM99_08445 PF00392 Bacterial regulatory proteins, gntR family FDM99_08445 PF07729 FCD domain FDM99_08455 PF00171 Aldehyde dehydrogenase family FDM99_08465 PF00202 Aminotransferase class-III FDM99_08470 PF04958 Arginine N-succinyltransferase beta subunit FDM99_08475 PF00324 Amino acid permease FDM99_08480 PF00171 Aldehyde dehydrogenase family FDM99_08500 PF00892 EamA-like transporter family FDM99_08505 PF08666 SAF domain FDM99_08505 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FDM99_08510 PF07690 Major Facilitator Superfamily FDM99_08520 PF00701 Dihydrodipicolinate synthetase family FDM99_08525 PF00171 Aldehyde dehydrogenase family FDM99_08530 PF07729 FCD domain FDM99_08530 PF00392 Bacterial regulatory proteins, gntR family FDM99_08535 PF07519 Tannase and feruloyl esterase FDM99_08550 PF03573 outer membrane porin, OprD family FDM99_08555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_08555 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_08555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_08565 PF00171 Aldehyde dehydrogenase family FDM99_08570 PF00378 Enoyl-CoA hydratase/isomerase FDM99_08575 PF07690 Major Facilitator Superfamily FDM99_08590 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_08590 PF00175 Oxidoreductase NAD-binding domain FDM99_08595 PF00355 Rieske [2Fe-2S] domain FDM99_08600 PF07690 Major Facilitator Superfamily FDM99_08605 PF03573 outer membrane porin, OprD family FDM99_08610 PF05199 GMC oxidoreductase FDM99_08615 PF07859 alpha/beta hydrolase fold FDM99_08620 PF00106 short chain dehydrogenase FDM99_08630 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDM99_08630 PF12833 Helix-turn-helix domain FDM99_08635 PF04072 Leucine carboxyl methyltransferase FDM99_08640 PF00743 Flavin-binding monooxygenase-like FDM99_08645 PF00106 short chain dehydrogenase FDM99_08655 PF17932 Tetracyclin repressor-like, C-terminal domain FDM99_08655 PF00440 Bacterial regulatory proteins, tetR family FDM99_08660 PF02678 Pirin FDM99_08660 PF17954 Quercetinase C-terminal cupin domain FDM99_08670 PF00106 short chain dehydrogenase FDM99_08675 PF00743 Flavin-binding monooxygenase-like FDM99_08685 PF00860 Permease family FDM99_08690 PF00962 Adenosine/AMP deaminase FDM99_08695 PF01292 Prokaryotic cytochrome b561 FDM99_08705 PF01351 Ribonuclease HII FDM99_08710 PF02599 Global regulator protein family FDM99_08715 PF00696 Amino acid kinase family FDM99_08715 PF01842 ACT domain FDM99_08715 PF13840 ACT domain FDM99_08720 PF01411 tRNA synthetases class II (A) FDM99_08720 PF02272 DHHA1 domain FDM99_08720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDM99_08725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDM99_08725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDM99_08730 PF13393 Histidyl-tRNA synthetase FDM99_08735 PF00709 Adenylosuccinate synthetase FDM99_08750 PF00248 Aldo/keto reductase family FDM99_08755 PF00027 Cyclic nucleotide-binding domain FDM99_08755 PF13545 Crp-like helix-turn-helix domain FDM99_08760 PF02566 OsmC-like protein FDM99_08775 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_08775 PF17871 AAA lid domain FDM99_08775 PF10431 C-terminal, D2-small domain, of ClpB protein FDM99_08775 PF07724 AAA domain (Cdc48 subfamily) FDM99_08775 PF02861 Clp amino terminal domain, pathogenicity island component FDM99_08800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDM99_08800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDM99_08805 PF01979 Amidohydrolase family FDM99_08810 PF13488 Glycine zipper FDM99_08810 PF00691 OmpA family FDM99_08820 PF00043 Glutathione S-transferase, C-terminal domain FDM99_08820 PF13417 Glutathione S-transferase, N-terminal domain FDM99_08825 PF02390 Putative methyltransferase FDM99_08835 PF02798 Glutathione S-transferase, N-terminal domain FDM99_08835 PF00043 Glutathione S-transferase, C-terminal domain FDM99_08845 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_08845 PF13192 Thioredoxin domain FDM99_08865 PF00578 AhpC/TSA family FDM99_08865 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDM99_08870 PF11898 Domain of unknown function (DUF3418) FDM99_08870 PF00270 DEAD/DEAH box helicase FDM99_08870 PF00271 Helicase conserved C-terminal domain FDM99_08870 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDM99_08870 PF04408 Helicase associated domain (HA2) FDM99_08875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDM99_08875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDM99_08885 PF07690 Major Facilitator Superfamily FDM99_08890 PF03594 Benzoate membrane transport protein FDM99_08895 PF00106 short chain dehydrogenase FDM99_08900 PF00970 Oxidoreductase FAD-binding domain FDM99_08900 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_08900 PF00175 Oxidoreductase NAD-binding domain FDM99_08905 PF00866 Ring hydroxylating beta subunit FDM99_08910 PF00355 Rieske [2Fe-2S] domain FDM99_08910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDM99_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_08915 PF03466 LysR substrate binding domain FDM99_08925 PF00403 Heavy-metal-associated domain FDM99_08930 PF09278 MerR, DNA binding FDM99_08930 PF00376 MerR family regulatory protein FDM99_08970 PF02601 Exonuclease VII, large subunit FDM99_08970 PF13742 OB-fold nucleic acid binding domain FDM99_09010 PF00313 'Cold-shock' DNA-binding domain FDM99_09205 PF01406 tRNA synthetases class I (C) catalytic domain FDM99_09205 PF09190 DALR domain FDM99_09210 PF01380 SIS domain FDM99_09210 PF00571 CBS domain FDM99_09225 PF03968 OstA-like protein FDM99_09230 PF00005 ABC transporter FDM99_09230 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDM99_09235 PF02321 Outer membrane efflux protein FDM99_09240 PF00005 ABC transporter FDM99_09240 PF03412 Peptidase C39 family FDM99_09240 PF00664 ABC transporter transmembrane region FDM99_09250 PF01205 Uncharacterized protein family UPF0029 FDM99_09255 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_09265 PF01596 O-methyltransferase FDM99_09275 PF11953 Domain of unknown function (DUF3470) FDM99_09275 PF00037 4Fe-4S binding domain FDM99_09285 PF05190 MutS family domain IV FDM99_09285 PF05188 MutS domain II FDM99_09285 PF01624 MutS domain I FDM99_09285 PF00488 MutS domain V FDM99_09285 PF05192 MutS domain III FDM99_09335 PF03466 LysR substrate binding domain FDM99_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_09345 PF00557 Metallopeptidase family M24 FDM99_09350 PF00083 Sugar (and other) transporter FDM99_09355 PF02028 BCCT, betaine/carnitine/choline family transporter FDM99_09360 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDM99_09360 PF00355 Rieske [2Fe-2S] domain FDM99_09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_09370 PF18113 Rubredoxin binding C-terminal domain FDM99_09375 PF01266 FAD dependent oxidoreductase FDM99_09375 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDM99_09395 PF00892 EamA-like transporter family FDM99_09405 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FDM99_09410 PF00083 Sugar (and other) transporter FDM99_09415 PF13378 Enolase C-terminal domain-like FDM99_09415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDM99_09420 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_09420 PF16197 Ketoacyl-synthetase C-terminal extension FDM99_09420 PF00698 Acyl transferase domain FDM99_09420 PF08990 Erythronolide synthase docking FDM99_09420 PF14765 Polyketide synthase dehydratase FDM99_09420 PF09277 Erythronolide synthase, docking FDM99_09420 PF00550 Phosphopantetheine attachment site FDM99_09420 PF08659 KR domain FDM99_09420 PF00109 Beta-ketoacyl synthase, N-terminal domain FDM99_09420 PF02801 Beta-ketoacyl synthase, C-terminal domain FDM99_09425 PF00440 Bacterial regulatory proteins, tetR family FDM99_09445 PF01070 FMN-dependent dehydrogenase FDM99_09450 PF00083 Sugar (and other) transporter FDM99_09465 PF00440 Bacterial regulatory proteins, tetR family FDM99_09500 PF00465 Iron-containing alcohol dehydrogenase FDM99_09505 PF00171 Aldehyde dehydrogenase family FDM99_09510 PF01614 Bacterial transcriptional regulator FDM99_09510 PF09339 IclR helix-turn-helix domain FDM99_09515 PF00171 Aldehyde dehydrogenase family FDM99_09520 PF00107 Zinc-binding dehydrogenase FDM99_09520 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_09530 PF06865 Pyrimidine/purine nucleoside phosphorylase FDM99_09535 PF01037 Lrp/AsnC ligand binding domain FDM99_09540 PF00892 EamA-like transporter family FDM99_09545 PF00563 EAL domain FDM99_09545 PF00990 Diguanylate cyclase, GGDEF domain FDM99_09545 PF03707 Bacterial signalling protein N terminal repeat FDM99_09550 PF03279 Bacterial lipid A biosynthesis acyltransferase FDM99_09560 PF00440 Bacterial regulatory proteins, tetR family FDM99_09585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDM99_09585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDM99_09615 PF04717 Type VI secretion system, phage-baseplate injector FDM99_09615 PF16671 Actin cross-linking domain FDM99_09620 PF14220 Domain of unknown function (DUF4329) FDM99_09620 PF05593 RHS Repeat FDM99_09620 PF03527 RHS protein FDM99_09630 PF05593 RHS Repeat FDM99_09630 PF03527 RHS protein FDM99_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_09660 PF03466 LysR substrate binding domain FDM99_09665 PF01566 Natural resistance-associated macrophage protein FDM99_09670 PF03746 LamB/YcsF family FDM99_09675 PF07286 Protein of unknown function (DUF1445) FDM99_09685 PF02785 Biotin carboxylase C-terminal domain FDM99_09685 PF00289 Biotin carboxylase, N-terminal domain FDM99_09685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDM99_09685 PF00364 Biotin-requiring enzyme FDM99_09690 PF00654 Voltage gated chloride channel FDM99_09715 PF00440 Bacterial regulatory proteins, tetR family FDM99_09725 PF00107 Zinc-binding dehydrogenase FDM99_09725 PF13823 Alcohol dehydrogenase GroES-associated FDM99_09725 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_09740 PF02785 Biotin carboxylase C-terminal domain FDM99_09740 PF00289 Biotin carboxylase, N-terminal domain FDM99_09740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDM99_09745 PF02525 Flavodoxin-like fold FDM99_09750 PF01638 HxlR-like helix-turn-helix FDM99_09760 PF01402 Ribbon-helix-helix protein, copG family FDM99_09760 PF08753 NikR C terminal nickel binding domain FDM99_09765 PF01425 Amidase FDM99_09770 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDM99_09775 PF00005 ABC transporter FDM99_09845 PF01389 OmpA-like transmembrane domain FDM99_09845 PF00691 OmpA family FDM99_09855 PF17871 AAA lid domain FDM99_09855 PF07724 AAA domain (Cdc48 subfamily) FDM99_09855 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_09855 PF10431 C-terminal, D2-small domain, of ClpB protein FDM99_09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_09885 PF03466 LysR substrate binding domain FDM99_09895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDM99_09900 PF07690 Major Facilitator Superfamily FDM99_09915 PF02677 Epoxyqueuosine reductase QueH FDM99_09925 PF00376 MerR family regulatory protein FDM99_09925 PF09278 MerR, DNA binding FDM99_09940 PF03313 Serine dehydratase alpha chain FDM99_09940 PF03315 Serine dehydratase beta chain FDM99_09945 PF00171 Aldehyde dehydrogenase family FDM99_09945 PF01575 MaoC like domain FDM99_09950 PF05138 Phenylacetic acid catabolic protein FDM99_09955 PF06243 Phenylacetic acid degradation B FDM99_09960 PF05138 Phenylacetic acid catabolic protein FDM99_09965 PF01883 Iron-sulfur cluster assembly protein FDM99_09970 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_09970 PF00970 Oxidoreductase FAD-binding domain FDM99_09970 PF00175 Oxidoreductase NAD-binding domain FDM99_09975 PF00378 Enoyl-CoA hydratase/isomerase FDM99_09980 PF00378 Enoyl-CoA hydratase/isomerase FDM99_09985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDM99_09985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDM99_09985 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FDM99_09990 PF00108 Thiolase, N-terminal domain FDM99_09990 PF02803 Thiolase, C-terminal domain FDM99_09995 PF14535 AMP-binding enzyme C-terminal domain FDM99_09995 PF00501 AMP-binding enzyme FDM99_10000 PF08223 PaaX-like protein C-terminal domain FDM99_10000 PF07848 PaaX-like protein FDM99_10005 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_10010 PF03061 Thioesterase superfamily FDM99_10040 PF01292 Prokaryotic cytochrome b561 FDM99_10060 PF12697 Alpha/beta hydrolase family FDM99_10065 PF01613 Flavin reductase like domain FDM99_10070 PF00296 Luciferase-like monooxygenase FDM99_10075 PF00171 Aldehyde dehydrogenase family FDM99_10085 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDM99_10095 PF00171 Aldehyde dehydrogenase family FDM99_10100 PF02627 Carboxymuconolactone decarboxylase family FDM99_10105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10105 PF03466 LysR substrate binding domain FDM99_10110 PF02525 Flavodoxin-like fold FDM99_10115 PF09339 IclR helix-turn-helix domain FDM99_10115 PF01614 Bacterial transcriptional regulator FDM99_10120 PF01494 FAD binding domain FDM99_10130 PF07702 UTRA domain FDM99_10130 PF00392 Bacterial regulatory proteins, gntR family FDM99_10140 PF00005 ABC transporter FDM99_10140 PF08402 TOBE domain FDM99_10145 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10150 PF01266 FAD dependent oxidoreductase FDM99_10155 PF00266 Aminotransferase class-V FDM99_10160 PF13419 Haloacid dehalogenase-like hydrolase FDM99_10165 PF01810 LysE type translocator FDM99_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10180 PF03466 LysR substrate binding domain FDM99_10185 PF00682 HMGL-like FDM99_10190 PF02785 Biotin carboxylase C-terminal domain FDM99_10190 PF00289 Biotin carboxylase, N-terminal domain FDM99_10190 PF00364 Biotin-requiring enzyme FDM99_10190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDM99_10195 PF00378 Enoyl-CoA hydratase/isomerase FDM99_10200 PF01039 Carboxyl transferase domain FDM99_10205 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_10205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_10205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_10210 PF00440 Bacterial regulatory proteins, tetR family FDM99_10215 PF13193 AMP-binding enzyme C-terminal domain FDM99_10215 PF00501 AMP-binding enzyme FDM99_10235 PF03466 LysR substrate binding domain FDM99_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10265 PF18146 Damage-inducible protein CinA KH domain FDM99_10265 PF00994 Probable molybdopterin binding domain FDM99_10265 PF02464 Competence-damaged protein FDM99_10275 PF06628 Catalase-related immune-responsive FDM99_10275 PF00199 Catalase FDM99_10275 PF18011 C-terminal domain found in long catalases FDM99_10300 PF00717 Peptidase S24-like FDM99_10310 PF13404 AsnC-type helix-turn-helix domain FDM99_10310 PF01037 Lrp/AsnC ligand binding domain FDM99_10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_10320 PF00072 Response regulator receiver domain FDM99_10320 PF09308 LuxQ, periplasmic FDM99_10320 PF00512 His Kinase A (phospho-acceptor) domain FDM99_10325 PF00072 Response regulator receiver domain FDM99_10340 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10345 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10350 PF00005 ABC transporter FDM99_10355 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDM99_10360 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDM99_10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10365 PF03466 LysR substrate binding domain FDM99_10370 PF01810 LysE type translocator FDM99_10375 PF00266 Aminotransferase class-V FDM99_10390 PF00581 Rhodanese-like domain FDM99_10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10400 PF03466 LysR substrate binding domain FDM99_10405 PF02798 Glutathione S-transferase, N-terminal domain FDM99_10410 PF14834 Glutathione S-transferase, C-terminal domain FDM99_10410 PF02798 Glutathione S-transferase, N-terminal domain FDM99_10415 PF03466 LysR substrate binding domain FDM99_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10420 PF03788 LrgA family FDM99_10425 PF04172 LrgB-like family FDM99_10430 PF00155 Aminotransferase class I and II FDM99_10430 PF00392 Bacterial regulatory proteins, gntR family FDM99_10445 PF07690 Major Facilitator Superfamily FDM99_10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10455 PF03466 LysR substrate binding domain FDM99_10460 PF16957 Malonate decarboxylase, alpha subunit, transporter FDM99_10465 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FDM99_10470 PF06857 Malonate decarboxylase delta subunit (MdcD) FDM99_10475 PF01039 Carboxyl transferase domain FDM99_10485 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FDM99_10490 PF00698 Acyl transferase domain FDM99_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10505 PF03466 LysR substrate binding domain FDM99_10510 PF00392 Bacterial regulatory proteins, gntR family FDM99_10510 PF00155 Aminotransferase class I and II FDM99_10520 PF02322 Cytochrome bd terminal oxidase subunit II FDM99_10525 PF01654 Cytochrome bd terminal oxidase subunit I FDM99_10540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_10540 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_10540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDM99_10545 PF00296 Luciferase-like monooxygenase FDM99_10550 PF00083 Sugar (and other) transporter FDM99_10560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDM99_10565 PF00005 ABC transporter FDM99_10570 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10575 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FDM99_10580 PF01177 Asp/Glu/Hydantoin racemase FDM99_10585 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDM99_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10595 PF03466 LysR substrate binding domain FDM99_10605 PF13382 Adenine deaminase C-terminal domain FDM99_10605 PF01979 Amidohydrolase family FDM99_10615 PF03960 ArsC family FDM99_10620 PF01022 Bacterial regulatory protein, arsR family FDM99_10625 PF01758 Sodium Bile acid symporter family FDM99_10630 PF03466 LysR substrate binding domain FDM99_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_10645 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_10645 PF13192 Thioredoxin domain FDM99_10660 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_10665 PF00588 SpoU rRNA Methylase family FDM99_10670 PF02811 PHP domain FDM99_10670 PF01336 OB-fold nucleic acid binding domain FDM99_10670 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDM99_10670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDM99_10670 PF14579 Helix-hairpin-helix motif FDM99_10675 PF17763 Glutaminase/Asparaginase C-terminal domain FDM99_10675 PF00710 Asparaginase, N-terminal FDM99_10680 PF00375 Sodium:dicarboxylate symporter family FDM99_10685 PF00155 Aminotransferase class I and II FDM99_10690 PF01641 SelR domain FDM99_10695 PF00255 Glutathione peroxidase FDM99_10700 PF12833 Helix-turn-helix domain FDM99_10700 PF12852 Cupin FDM99_10710 PF00155 Aminotransferase class I and II FDM99_10715 PF01909 Nucleotidyltransferase domain FDM99_10715 PF01966 HD domain FDM99_10715 PF08335 GlnD PII-uridylyltransferase FDM99_10720 PF02222 ATP-grasp domain FDM99_10730 PF05437 Branched-chain amino acid transport protein (AzlD) FDM99_10735 PF03591 AzlC protein FDM99_10760 PF01926 50S ribosome-binding GTPase FDM99_10760 PF06071 Protein of unknown function (DUF933) FDM99_10765 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10770 PF09383 NIL domain FDM99_10770 PF00005 ABC transporter FDM99_10775 PF03180 NLPA lipoprotein FDM99_10780 PF03180 NLPA lipoprotein FDM99_10785 PF00296 Luciferase-like monooxygenase FDM99_10795 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDM99_10795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_10810 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10815 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_10820 PF00005 ABC transporter FDM99_10830 PF01037 Lrp/AsnC ligand binding domain FDM99_10835 PF01709 Transcriptional regulator FDM99_10845 PF00440 Bacterial regulatory proteins, tetR family FDM99_10880 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDM99_10880 PF12833 Helix-turn-helix domain FDM99_10895 PF02753 Pili assembly chaperone PapD, C-terminal domain FDM99_10895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FDM99_10900 PF16970 Type-1 fimbrial protein, A FDM99_10915 PF06968 Biotin and Thiamin Synthesis associated domain FDM99_10915 PF04055 Radical SAM superfamily FDM99_10920 PF08331 Domain of unknown function (DUF1730) FDM99_10925 PF03853 YjeF-related protein N-terminus FDM99_10925 PF01256 Carbohydrate kinase FDM99_10930 PF02075 Crossover junction endodeoxyribonuclease RuvC FDM99_10945 PF00905 Penicillin binding protein transpeptidase domain FDM99_10965 PF02772 S-adenosylmethionine synthetase, central domain FDM99_10965 PF02773 S-adenosylmethionine synthetase, C-terminal domain FDM99_10965 PF00438 S-adenosylmethionine synthetase, N-terminal domain FDM99_10970 PF00456 Transketolase, thiamine diphosphate binding domain FDM99_10970 PF02780 Transketolase, C-terminal domain FDM99_10970 PF02779 Transketolase, pyrimidine binding domain FDM99_10980 PF04264 YceI-like domain FDM99_10990 PF09992 Phosphodiester glycosidase FDM99_11000 PF05958 tRNA (Uracil-5-)-methyltransferase FDM99_11005 PF04229 GrpB protein FDM99_11010 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FDM99_11010 PF14850 DNA-binding domain of Proline dehydrogenase FDM99_11010 PF01619 Proline dehydrogenase FDM99_11010 PF00171 Aldehyde dehydrogenase family FDM99_11015 PF01037 Lrp/AsnC ligand binding domain FDM99_11020 PF00474 Sodium:solute symporter family FDM99_11025 PF02146 Sir2 family FDM99_11030 PF01597 Glycine cleavage H-protein FDM99_11035 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDM99_11035 PF12833 Helix-turn-helix domain FDM99_11045 PF00005 ABC transporter FDM99_11045 PF00664 ABC transporter transmembrane region FDM99_11050 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FDM99_11055 PF06912 Protein of unknown function (DUF1275) FDM99_11060 PF00375 Sodium:dicarboxylate symporter family FDM99_11075 PF08007 Cupin superfamily protein FDM99_11080 PF02545 Maf-like protein FDM99_11090 PF00162 Phosphoglycerate kinase FDM99_11100 PF01116 Fructose-bisphosphate aldolase class-II FDM99_11110 PF04453 LPS transport system D FDM99_11110 PF03968 OstA-like protein FDM99_11115 PF01636 Phosphotransferase enzyme family FDM99_11120 PF00483 Nucleotidyl transferase FDM99_11125 PF02527 rRNA small subunit methyltransferase G FDM99_11130 PF13614 AAA domain FDM99_11135 PF17762 HTH domain found in ParB protein FDM99_11135 PF02195 ParB-like nuclease domain FDM99_11140 PF01618 MotA/TolQ/ExbB proton channel family FDM99_11150 PF00005 ABC transporter FDM99_11150 PF00664 ABC transporter transmembrane region FDM99_11155 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDM99_11160 PF02348 Cytidylyltransferase FDM99_11165 PF09115 DNA polymerase III, delta subunit, C terminal FDM99_11175 PF01026 TatD related DNase FDM99_11190 PF02501 Type II secretion system (T2SS), protein I FDM99_11190 PF07963 Prokaryotic N-terminal methylation motif FDM99_11195 PF11612 Type II secretion system (T2SS), protein J FDM99_11195 PF07963 Prokaryotic N-terminal methylation motif FDM99_11200 PF03934 Type II secretion system (T2SS), protein K FDM99_11210 PF03167 Uracil DNA glycosylase superfamily FDM99_11220 PF14437 MafB19-like deaminase FDM99_11230 PF02224 Cytidylate kinase FDM99_11235 PF00575 S1 RNA binding domain FDM99_11240 PF00216 Bacterial DNA-binding protein FDM99_11250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FDM99_11260 PF00743 Flavin-binding monooxygenase-like FDM99_11270 PF03969 AFG1-like ATPase FDM99_11275 PF01274 Malate synthase FDM99_11285 PF02472 Biopolymer transport protein ExbD/TolR FDM99_11290 PF02472 Biopolymer transport protein ExbD/TolR FDM99_11295 PF01618 MotA/TolQ/ExbB proton channel family FDM99_11305 PF07715 TonB-dependent Receptor Plug Domain FDM99_11305 PF00593 TonB dependent receptor FDM99_11320 PF01432 Peptidase family M3 FDM99_11325 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_11330 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_11335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDM99_11335 PF00005 ABC transporter FDM99_11350 PF00459 Inositol monophosphatase family FDM99_11360 PF01649 Ribosomal protein S20 FDM99_11365 PF13460 NAD(P)H-binding FDM99_11370 PF03737 Aldolase/RraA FDM99_11390 PF17757 UvrB interaction domain FDM99_11390 PF03461 TRCF domain FDM99_11390 PF00271 Helicase conserved C-terminal domain FDM99_11390 PF00270 DEAD/DEAH box helicase FDM99_11390 PF02559 CarD-like/TRCF domain FDM99_11400 PF00211 Adenylate and Guanylate cyclase catalytic domain FDM99_11405 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_11410 PF00012 Hsp70 protein FDM99_11415 PF00226 DnaJ domain FDM99_11415 PF07743 HSCB C-terminal oligomerisation domain FDM99_11420 PF01521 Iron-sulphur cluster biosynthesis FDM99_11425 PF01592 NifU-like N terminal domain FDM99_11430 PF00266 Aminotransferase class-V FDM99_11435 PF02082 Transcriptional regulator FDM99_11455 PF00639 PPIC-type PPIASE domain FDM99_11455 PF09312 SurA N-terminal domain FDM99_11460 PF12833 Helix-turn-helix domain FDM99_11460 PF12852 Cupin FDM99_11470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_11470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_11470 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_11475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_11475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_11475 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_11480 PF03109 ABC1 family FDM99_11490 PF04073 Aminoacyl-tRNA editing domain FDM99_11495 PF04183 IucA / IucC family FDM99_11495 PF06276 Ferric iron reductase FhuF-like transporter FDM99_11500 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FDM99_11505 PF07690 Major Facilitator Superfamily FDM99_11510 PF04183 IucA / IucC family FDM99_11510 PF06276 Ferric iron reductase FhuF-like transporter FDM99_11515 PF06276 Ferric iron reductase FhuF-like transporter FDM99_11515 PF04183 IucA / IucC family FDM99_11525 PF03737 Aldolase/RraA FDM99_11530 PF07715 TonB-dependent Receptor Plug Domain FDM99_11530 PF00593 TonB dependent receptor FDM99_11570 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDM99_11575 PF02277 Phosphoribosyltransferase FDM99_11580 PF00300 Histidine phosphatase superfamily (branch 1) FDM99_11590 PF02654 Cobalamin-5-phosphate synthase FDM99_11595 PF00793 DAHP synthetase I family FDM99_11600 PF01925 Sulfite exporter TauE/SafE FDM99_11620 PF07715 TonB-dependent Receptor Plug Domain FDM99_11620 PF00593 TonB dependent receptor FDM99_11625 PF02684 Lipid-A-disaccharide synthetase FDM99_11635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_11640 PF00005 ABC transporter FDM99_11675 PF01230 HIT domain FDM99_11710 PF08241 Methyltransferase domain FDM99_11715 PF00561 alpha/beta hydrolase fold FDM99_11720 PF01053 Cys/Met metabolism PLP-dependent enzyme FDM99_11730 PF02575 YbaB/EbfC DNA-binding family FDM99_11735 PF13662 Toprim domain FDM99_11735 PF02132 RecR protein FDM99_11740 PF00570 HRDC domain FDM99_11740 PF01612 3'-5' exonuclease FDM99_11760 PF05166 YcgL domain FDM99_11770 PF17862 AAA+ lid domain FDM99_11770 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_11770 PF01434 Peptidase family M41 FDM99_11780 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_11785 PF05175 Methyltransferase small domain FDM99_11790 PF01264 Chorismate synthase FDM99_11795 PF08448 PAS fold FDM99_11795 PF00990 Diguanylate cyclase, GGDEF domain FDM99_11810 PF04055 Radical SAM superfamily FDM99_11815 PF00676 Dehydrogenase E1 component FDM99_11820 PF02779 Transketolase, pyrimidine binding domain FDM99_11820 PF02780 Transketolase, C-terminal domain FDM99_11825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDM99_11825 PF02817 e3 binding domain FDM99_11825 PF00364 Biotin-requiring enzyme FDM99_11830 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_11830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDM99_11835 PF00106 short chain dehydrogenase FDM99_11840 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_11840 PF00107 Zinc-binding dehydrogenase FDM99_11845 PF01062 Bestrophin, RFP-TM, chloride channel FDM99_11850 PF00158 Sigma-54 interaction domain FDM99_11850 PF02954 Bacterial regulatory protein, Fis family FDM99_11850 PF00072 Response regulator receiver domain FDM99_11855 PF00753 Metallo-beta-lactamase superfamily FDM99_11855 PF04273 Putative phosphatase (DUF442) FDM99_11860 PF04273 Putative phosphatase (DUF442) FDM99_11860 PF00753 Metallo-beta-lactamase superfamily FDM99_11865 PF01925 Sulfite exporter TauE/SafE FDM99_11880 PF12833 Helix-turn-helix domain FDM99_11880 PF06445 GyrI-like small molecule binding domain FDM99_11885 PF01638 HxlR-like helix-turn-helix FDM99_11890 PF02525 Flavodoxin-like fold FDM99_11895 PF02417 Chromate transporter FDM99_11915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDM99_11920 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_11925 PF00005 ABC transporter FDM99_11940 PF00083 Sugar (and other) transporter FDM99_11945 PF07715 TonB-dependent Receptor Plug Domain FDM99_11945 PF00593 TonB dependent receptor FDM99_11950 PF00206 Lyase FDM99_11950 PF10415 Fumarase C C-terminus FDM99_11965 PF03466 LysR substrate binding domain FDM99_11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_11970 PF03466 LysR substrate binding domain FDM99_11975 PF02803 Thiolase, C-terminal domain FDM99_11975 PF00108 Thiolase, N-terminal domain FDM99_11980 PF02667 Short chain fatty acid transporter FDM99_11985 PF01144 Coenzyme A transferase FDM99_11990 PF01144 Coenzyme A transferase FDM99_11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_11995 PF03466 LysR substrate binding domain FDM99_12035 PF06719 AraC-type transcriptional regulator N-terminus FDM99_12035 PF12833 Helix-turn-helix domain FDM99_12040 PF07690 Major Facilitator Superfamily FDM99_12045 PF01738 Dienelactone hydrolase family FDM99_12060 PF01613 Flavin reductase like domain FDM99_12070 PF12833 Helix-turn-helix domain FDM99_12070 PF14525 AraC-binding-like domain FDM99_12075 PF00175 Oxidoreductase NAD-binding domain FDM99_12075 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_12075 PF00970 Oxidoreductase FAD-binding domain FDM99_12080 PF00866 Ring hydroxylating beta subunit FDM99_12085 PF00355 Rieske [2Fe-2S] domain FDM99_12085 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDM99_12090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_12090 PF03459 TOBE domain FDM99_12100 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_12105 PF00005 ABC transporter FDM99_12105 PF03459 TOBE domain FDM99_12110 PF00106 short chain dehydrogenase FDM99_12115 PF00857 Isochorismatase family FDM99_12115 PF00550 Phosphopantetheine attachment site FDM99_12125 PF00149 Calcineurin-like phosphoesterase FDM99_12130 PF13090 Polyphosphate kinase C-terminal domain 2 FDM99_12130 PF02503 Polyphosphate kinase middle domain FDM99_12130 PF17941 Polyphosphate kinase C-terminal domain 1 FDM99_12130 PF13089 Polyphosphate kinase N-terminal domain FDM99_12135 PF08042 PqqA family FDM99_12140 PF12706 Beta-lactamase superfamily domain FDM99_12145 PF03070 TENA/THI-4/PQQC family FDM99_12150 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FDM99_12155 PF13186 Iron-sulfur cluster-binding domain FDM99_12155 PF04055 Radical SAM superfamily FDM99_12160 PF01244 Membrane dipeptidase (Peptidase family M19) FDM99_12180 PF13091 PLD-like domain FDM99_12195 PF00199 Catalase FDM99_12205 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_12205 PF00107 Zinc-binding dehydrogenase FDM99_12235 PF13737 Transposase DDE domain FDM99_12250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDM99_12255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDM99_12255 PF14572 Phosphoribosyl synthetase-associated domain FDM99_12275 PF00005 ABC transporter FDM99_12290 PF00107 Zinc-binding dehydrogenase FDM99_12290 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_12295 PF12833 Helix-turn-helix domain FDM99_12295 PF06719 AraC-type transcriptional regulator N-terminus FDM99_12300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDM99_12300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDM99_12305 PF07690 Major Facilitator Superfamily FDM99_12310 PF01370 NAD dependent epimerase/dehydratase family FDM99_12315 PF03466 LysR substrate binding domain FDM99_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_12325 PF00920 Dehydratase family FDM99_12330 PF00171 Aldehyde dehydrogenase family FDM99_12345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_12345 PF00529 HlyD membrane-fusion protein of T1SS FDM99_12355 PF03737 Aldolase/RraA FDM99_12360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDM99_12360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDM99_12360 PF01842 ACT domain FDM99_12365 PF07690 Major Facilitator Superfamily FDM99_12390 PF04909 Amidohydrolase FDM99_12395 PF07690 Major Facilitator Superfamily FDM99_12400 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) FDM99_12440 PF13193 AMP-binding enzyme C-terminal domain FDM99_12440 PF00501 AMP-binding enzyme FDM99_12450 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_12450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_12450 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDM99_12450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_12455 PF01575 MaoC like domain FDM99_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_12475 PF03466 LysR substrate binding domain FDM99_12480 PF08359 YsiA-like protein, C-terminal region FDM99_12480 PF00440 Bacterial regulatory proteins, tetR family FDM99_12485 PF12706 Beta-lactamase superfamily domain FDM99_12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_12505 PF00376 MerR family regulatory protein FDM99_12505 PF09278 MerR, DNA binding FDM99_12515 PF00106 short chain dehydrogenase FDM99_12520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_12520 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_12545 PF07690 Major Facilitator Superfamily FDM99_12550 PF00920 Dehydratase family FDM99_12555 PF00392 Bacterial regulatory proteins, gntR family FDM99_12555 PF07729 FCD domain FDM99_12565 PF03466 LysR substrate binding domain FDM99_12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_12570 PF13378 Enolase C-terminal domain-like FDM99_12570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDM99_12575 PF02426 Muconolactone delta-isomerase FDM99_12580 PF00775 Dioxygenase FDM99_12580 PF04444 Catechol dioxygenase N terminus FDM99_12595 PF00108 Thiolase, N-terminal domain FDM99_12595 PF02803 Thiolase, C-terminal domain FDM99_12600 PF12146 Serine aminopeptidase, S33 FDM99_12605 PF01804 Penicillin amidase FDM99_12610 PF00171 Aldehyde dehydrogenase family FDM99_12620 PF02727 Copper amine oxidase, N2 domain FDM99_12620 PF01179 Copper amine oxidase, enzyme domain FDM99_12620 PF07833 Copper amine oxidase N-terminal domain FDM99_12620 PF02728 Copper amine oxidase, N3 domain FDM99_12625 PF02311 AraC-like ligand binding domain FDM99_12625 PF12833 Helix-turn-helix domain FDM99_12630 PF01613 Flavin reductase like domain FDM99_12635 PF00175 Oxidoreductase NAD-binding domain FDM99_12635 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_12650 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDM99_12650 PF00355 Rieske [2Fe-2S] domain FDM99_12665 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDM99_12670 PF01425 Amidase FDM99_12690 PF00106 short chain dehydrogenase FDM99_12705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_12705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_12705 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_12710 PF03466 LysR substrate binding domain FDM99_12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_12715 PF01614 Bacterial transcriptional regulator FDM99_12715 PF09339 IclR helix-turn-helix domain FDM99_12720 PF00753 Metallo-beta-lactamase superfamily FDM99_12730 PF04143 Sulphur transport FDM99_12740 PF13360 PQQ-like domain FDM99_12740 PF01011 PQQ enzyme repeat FDM99_12745 PF04966 Carbohydrate-selective porin, OprB family FDM99_12750 PF05048 Periplasmic copper-binding protein (NosD) FDM99_12755 PF01487 Type I 3-dehydroquinase FDM99_12760 PF00775 Dioxygenase FDM99_12765 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FDM99_12765 PF00775 Dioxygenase FDM99_12770 PF02627 Carboxymuconolactone decarboxylase family FDM99_12775 PF07690 Major Facilitator Superfamily FDM99_12780 PF00561 alpha/beta hydrolase fold FDM99_12785 PF10397 Adenylosuccinate lyase C-terminus FDM99_12785 PF00206 Lyase FDM99_12790 PF02803 Thiolase, C-terminal domain FDM99_12790 PF00108 Thiolase, N-terminal domain FDM99_12795 PF01144 Coenzyme A transferase FDM99_12800 PF01144 Coenzyme A transferase FDM99_12805 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDM99_12810 PF04977 Septum formation initiator FDM99_12815 PF04239 Protein of unknown function (DUF421) FDM99_12820 PF03952 Enolase, N-terminal domain FDM99_12820 PF00113 Enolase, C-terminal TIM barrel domain FDM99_12825 PF00793 DAHP synthetase I family FDM99_12830 PF06418 CTP synthase N-terminus FDM99_12830 PF00117 Glutamine amidotransferase class-I FDM99_12860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_12860 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_12875 PF00793 DAHP synthetase I family FDM99_12880 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FDM99_12885 PF02861 Clp amino terminal domain, pathogenicity island component FDM99_12885 PF17871 AAA lid domain FDM99_12885 PF07724 AAA domain (Cdc48 subfamily) FDM99_12885 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_12885 PF10431 C-terminal, D2-small domain, of ClpB protein FDM99_12890 PF02617 ATP-dependent Clp protease adaptor protein ClpS FDM99_12900 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDM99_12900 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDM99_12915 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDM99_12920 PF00585 C-terminal regulatory domain of Threonine dehydratase FDM99_12920 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_12925 PF02254 TrkA-N domain FDM99_12925 PF02080 TrkA-C domain FDM99_12930 PF02386 Cation transport protein FDM99_12935 PF02253 Phospholipase A1 FDM99_12940 PF05193 Peptidase M16 inactive domain FDM99_12940 PF08367 Peptidase M16C associated FDM99_12940 PF00675 Insulinase (Peptidase family M16) FDM99_12945 PF07715 TonB-dependent Receptor Plug Domain FDM99_12945 PF00593 TonB dependent receptor FDM99_12950 PF00294 pfkB family carbohydrate kinase FDM99_12960 PF07290 Protein of unknown function (DUF1449) FDM99_12970 PF01654 Cytochrome bd terminal oxidase subunit I FDM99_12975 PF02322 Cytochrome bd terminal oxidase subunit II FDM99_12980 PF08173 Membrane bound YbgT-like protein FDM99_12990 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDM99_13000 PF00448 SRP54-type protein, GTPase domain FDM99_13000 PF02881 SRP54-type protein, helical bundle domain FDM99_13025 PF00571 CBS domain FDM99_13025 PF00478 IMP dehydrogenase / GMP reductase domain FDM99_13030 PF00202 Aminotransferase class-III FDM99_13035 PF00462 Glutaredoxin FDM99_13045 PF03466 LysR substrate binding domain FDM99_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_13050 PF00557 Metallopeptidase family M24 FDM99_13055 PF05525 Branched-chain amino acid transport protein FDM99_13080 PF00381 PTS HPr component phosphorylation site FDM99_13080 PF05524 PEP-utilising enzyme, N-terminal FDM99_13080 PF02896 PEP-utilising enzyme, TIM barrel domain FDM99_13080 PF00391 PEP-utilising enzyme, mobile domain FDM99_13080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDM99_13085 PF00294 pfkB family carbohydrate kinase FDM99_13090 PF02378 Phosphotransferase system, EIIC FDM99_13090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDM99_13110 PF00990 Diguanylate cyclase, GGDEF domain FDM99_13110 PF03707 Bacterial signalling protein N terminal repeat FDM99_13110 PF00563 EAL domain FDM99_13120 PF07995 Glucose / Sorbosone dehydrogenase FDM99_13125 PF02586 SOS response associated peptidase (SRAP) FDM99_13130 PF00916 Sulfate permease family FDM99_13130 PF01740 STAS domain FDM99_13135 PF05922 Peptidase inhibitor I9 FDM99_13135 PF00082 Subtilase family FDM99_13145 PF00324 Amino acid permease FDM99_13150 PF00266 Aminotransferase class-V FDM99_13155 PF01037 Lrp/AsnC ligand binding domain FDM99_13180 PF13419 Haloacid dehalogenase-like hydrolase FDM99_13185 PF01479 S4 domain FDM99_13190 PF00154 recA bacterial DNA recombination protein FDM99_13195 PF02631 RecX family FDM99_13210 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_13210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDM99_13215 PF07977 FabA-like domain FDM99_13220 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_13220 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FDM99_13230 PF01103 Surface antigen FDM99_13230 PF07244 Surface antigen variable number repeat FDM99_13240 PF13288 DXP reductoisomerase C-terminal domain FDM99_13240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FDM99_13240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FDM99_13250 PF01255 Putative undecaprenyl diphosphate synthase FDM99_13255 PF01765 Ribosome recycling factor FDM99_13260 PF00696 Amino acid kinase family FDM99_13265 PF00919 Uncharacterized protein family UPF0004 FDM99_13265 PF18693 TRAM domain FDM99_13265 PF04055 Radical SAM superfamily FDM99_13275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_13275 PF00512 His Kinase A (phospho-acceptor) domain FDM99_13275 PF00989 PAS fold FDM99_13280 PF00072 Response regulator receiver domain FDM99_13280 PF00158 Sigma-54 interaction domain FDM99_13280 PF02954 Bacterial regulatory protein, Fis family FDM99_13285 PF00440 Bacterial regulatory proteins, tetR family FDM99_13290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDM99_13290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDM99_13300 PF02542 YgbB family FDM99_13310 PF01266 FAD dependent oxidoreductase FDM99_13335 PF10415 Fumarase C C-terminus FDM99_13335 PF00206 Lyase FDM99_13340 PF16363 GDP-mannose 4,6 dehydratase FDM99_13345 PF02635 DsrE/DsrF-like family FDM99_13365 PF00892 EamA-like transporter family FDM99_13370 PF00155 Aminotransferase class I and II FDM99_13370 PF00392 Bacterial regulatory proteins, gntR family FDM99_13375 PF01638 HxlR-like helix-turn-helix FDM99_13380 PF03453 MoeA N-terminal region (domain I and II) FDM99_13380 PF03454 MoeA C-terminal region (domain IV) FDM99_13380 PF00994 Probable molybdopterin binding domain FDM99_13385 PF00994 Probable molybdopterin binding domain FDM99_13385 PF01967 MoaC family FDM99_13390 PF02391 MoaE protein FDM99_13400 PF06463 Molybdenum Cofactor Synthesis C FDM99_13400 PF04055 Radical SAM superfamily FDM99_13405 PF00384 Molybdopterin oxidoreductase FDM99_13405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDM99_13405 PF01568 Molydopterin dinucleotide binding domain FDM99_13410 PF12804 MobA-like NTP transferase domain FDM99_13415 PF00384 Molybdopterin oxidoreductase FDM99_13415 PF01568 Molydopterin dinucleotide binding domain FDM99_13415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDM99_13415 PF04324 BFD-like [2Fe-2S] binding domain FDM99_13420 PF04324 BFD-like [2Fe-2S] binding domain FDM99_13420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDM99_13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_13420 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDM99_13420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDM99_13425 PF13806 Rieske-like [2Fe-2S] domain FDM99_13425 PF04324 BFD-like [2Fe-2S] binding domain FDM99_13425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDM99_13425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDM99_13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_13425 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDM99_13435 PF00072 Response regulator receiver domain FDM99_13435 PF00486 Transcriptional regulatory protein, C terminal FDM99_13440 PF00005 ABC transporter FDM99_13450 PF11799 impB/mucB/samB family C-terminal domain FDM99_13450 PF00817 impB/mucB/samB family FDM99_13450 PF13438 Domain of unknown function (DUF4113) FDM99_13455 PF01220 Dehydroquinase class II FDM99_13460 PF00364 Biotin-requiring enzyme FDM99_13465 PF02785 Biotin carboxylase C-terminal domain FDM99_13465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDM99_13465 PF00289 Biotin carboxylase, N-terminal domain FDM99_13475 PF12832 MFS_1 like family FDM99_13495 PF10137 Predicted nucleotide-binding protein containing TIR-like domain FDM99_13535 PF10145 Phage-related minor tail protein FDM99_13535 PF01464 Transglycosylase SLT domain FDM99_13535 PF01551 Peptidase family M23 FDM99_13740 PF00145 C-5 cytosine-specific DNA methylase FDM99_13820 PF01645 Conserved region in glutamate synthase FDM99_13835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FDM99_13835 PF01565 FAD binding domain FDM99_13850 PF00465 Iron-containing alcohol dehydrogenase FDM99_13855 PF03061 Thioesterase superfamily FDM99_13860 PF05506 Domain of unknown function (DUF756) FDM99_13860 PF04185 Phosphoesterase family FDM99_13865 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FDM99_13865 PF12170 DNA polymerase III tau subunit V interacting with alpha FDM99_13865 PF12169 DNA polymerase III subunits gamma and tau domain III FDM99_13870 PF07690 Major Facilitator Superfamily FDM99_13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_13905 PF03466 LysR substrate binding domain FDM99_13915 PF01810 LysE type translocator FDM99_13920 PF01037 Lrp/AsnC ligand binding domain FDM99_13925 PF03594 Benzoate membrane transport protein FDM99_13930 PF02308 MgtC family FDM99_13960 PF00582 Universal stress protein family FDM99_13965 PF00005 ABC transporter FDM99_13965 PF12848 ABC transporter FDM99_13985 PF00593 TonB dependent receptor FDM99_13985 PF07715 TonB-dependent Receptor Plug Domain FDM99_14015 PF00924 Mechanosensitive ion channel FDM99_14025 PF00440 Bacterial regulatory proteins, tetR family FDM99_14040 PF01037 Lrp/AsnC ligand binding domain FDM99_14045 PF01817 Chorismate mutase type II FDM99_14070 PF00577 Outer membrane usher protein FDM99_14070 PF13954 PapC N-terminal domain FDM99_14070 PF13953 PapC C-terminal domain FDM99_14085 PF01433 Peptidase family M1 domain FDM99_14085 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FDM99_14085 PF11940 Domain of unknown function (DUF3458) Ig-like fold FDM99_14100 PF02110 Hydroxyethylthiazole kinase family FDM99_14105 PF06445 GyrI-like small molecule binding domain FDM99_14115 PF14493 Helix-turn-helix domain FDM99_14115 PF05970 PIF1-like helicase FDM99_14120 PF00465 Iron-containing alcohol dehydrogenase FDM99_14135 PF00171 Aldehyde dehydrogenase family FDM99_14140 PF13520 Amino acid permease FDM99_14145 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FDM99_14150 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FDM99_14155 PF00958 GMP synthase C terminal domain FDM99_14155 PF02540 NAD synthase FDM99_14155 PF00117 Glutamine amidotransferase class-I FDM99_14160 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FDM99_14160 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDM99_14165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDM99_14170 PF00149 Calcineurin-like phosphoesterase FDM99_14180 PF00881 Nitroreductase family FDM99_14190 PF17209 Hfq protein FDM99_14200 PF08676 MutL C terminal dimerisation domain FDM99_14200 PF01119 DNA mismatch repair protein, C-terminal domain FDM99_14205 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FDM99_14210 PF01479 S4 domain FDM99_14210 PF00849 RNA pseudouridylate synthase FDM99_14225 PF01479 S4 domain FDM99_14225 PF00849 RNA pseudouridylate synthase FDM99_14235 PF04284 Protein of unknown function (DUF441) FDM99_14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_14240 PF03466 LysR substrate binding domain FDM99_14255 PF07690 Major Facilitator Superfamily FDM99_14260 PF00027 Cyclic nucleotide-binding domain FDM99_14260 PF00520 Ion transport protein FDM99_14270 PF11791 Aconitate B N-terminal domain FDM99_14270 PF06434 Aconitate hydratase 2 N-terminus FDM99_14270 PF00330 Aconitase family (aconitate hydratase) FDM99_14290 PF01103 Surface antigen FDM99_14290 PF17243 POTRA domain TamA domain 1 FDM99_14290 PF07244 Surface antigen variable number repeat FDM99_14295 PF07690 Major Facilitator Superfamily FDM99_14300 PF03232 Ubiquinone biosynthesis protein COQ7 FDM99_14310 PF00120 Glutamine synthetase, catalytic domain FDM99_14315 PF00486 Transcriptional regulatory protein, C terminal FDM99_14315 PF00072 Response regulator receiver domain FDM99_14320 PF02702 Osmosensitive K+ channel His kinase sensor domain FDM99_14320 PF00512 His Kinase A (phospho-acceptor) domain FDM99_14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_14320 PF13493 Domain of unknown function (DUF4118) FDM99_14325 PF02669 K+-transporting ATPase, c chain FDM99_14335 PF03814 Potassium-transporting ATPase A subunit FDM99_14350 PF03109 ABC1 family FDM99_14355 PF00899 ThiF family FDM99_14360 PF01613 Flavin reductase like domain FDM99_14365 PF00501 AMP-binding enzyme FDM99_14365 PF13193 AMP-binding enzyme C-terminal domain FDM99_14370 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_14370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_14370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_14375 PF00106 short chain dehydrogenase FDM99_14380 PF12833 Helix-turn-helix domain FDM99_14385 PF17827 PrmC N-terminal domain FDM99_14385 PF13847 Methyltransferase domain FDM99_14390 PF00472 RF-1 domain FDM99_14390 PF03462 PCRF domain FDM99_14400 PF03466 LysR substrate binding domain FDM99_14400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_14420 PF00296 Luciferase-like monooxygenase FDM99_14430 PF13994 PgaD-like protein FDM99_14435 PF00535 Glycosyl transferase family 2 FDM99_14440 PF14883 Hypothetical glycosyl hydrolase family 13 FDM99_14440 PF01522 Polysaccharide deacetylase FDM99_14460 PF03618 Kinase/pyrophosphorylase FDM99_14465 PF00391 PEP-utilising enzyme, mobile domain FDM99_14465 PF02896 PEP-utilising enzyme, TIM barrel domain FDM99_14465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FDM99_14475 PF06481 COX Aromatic Rich Motif FDM99_14475 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDM99_14480 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDM99_14485 PF00510 Cytochrome c oxidase subunit III FDM99_14490 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FDM99_14495 PF01040 UbiA prenyltransferase family FDM99_14500 PF01250 Ribosomal protein S6 FDM99_14505 PF01084 Ribosomal protein S18 FDM99_14510 PF03948 Ribosomal protein L9, C-terminal domain FDM99_14510 PF01281 Ribosomal protein L9, N-terminal domain FDM99_14515 PF00772 DnaB-like helicase N terminal domain FDM99_14515 PF03796 DnaB-like helicase C terminal domain FDM99_14520 PF01168 Alanine racemase, N-terminal domain FDM99_14520 PF00842 Alanine racemase, C-terminal domain FDM99_14530 PF01841 Transglutaminase-like superfamily FDM99_14530 PF08379 Bacterial transglutaminase-like N-terminal region FDM99_14540 PF14403 Circularly permuted ATP-grasp type 2 FDM99_14550 PF13932 GidA associated domain FDM99_14550 PF01134 Glucose inhibited division protein A FDM99_14570 PF02954 Bacterial regulatory protein, Fis family FDM99_14575 PF01808 AICARFT/IMPCHase bienzyme FDM99_14575 PF02142 MGS-like domain FDM99_14580 PF02844 Phosphoribosylglycinamide synthetase, N domain FDM99_14580 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FDM99_14580 PF02843 Phosphoribosylglycinamide synthetase, C domain FDM99_14585 PF03180 NLPA lipoprotein FDM99_14590 PF00005 ABC transporter FDM99_14590 PF09383 NIL domain FDM99_14595 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_14600 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDM99_14600 PF00753 Metallo-beta-lactamase superfamily FDM99_14610 PF00375 Sodium:dicarboxylate symporter family FDM99_14630 PF07995 Glucose / Sorbosone dehydrogenase FDM99_14635 PF00892 EamA-like transporter family FDM99_14640 PF01177 Asp/Glu/Hydantoin racemase FDM99_14660 PF02470 MlaD protein FDM99_14665 PF04403 Paraquat-inducible protein A FDM99_14695 PF00083 Sugar (and other) transporter FDM99_14695 PF08946 Osmosensory transporter coiled coil FDM99_14710 PF07729 FCD domain FDM99_14710 PF00392 Bacterial regulatory proteins, gntR family FDM99_14720 PF03616 Sodium/glutamate symporter FDM99_14725 PF00561 alpha/beta hydrolase fold FDM99_14750 PF04076 Bacterial OB fold (BOF) protein FDM99_14780 PF00324 Amino acid permease FDM99_14785 PF00171 Aldehyde dehydrogenase family FDM99_14790 PF00202 Aminotransferase class-III FDM99_14820 PF00069 Protein kinase domain FDM99_14840 PF00814 Glycoprotease family FDM99_14845 PF01165 Ribosomal protein S21 FDM99_14850 PF09424 Yqey-like protein FDM99_14855 PF01435 Peptidase family M48 FDM99_14860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDM99_14860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDM99_14875 PF00156 Phosphoribosyl transferase domain FDM99_14880 PF02674 Colicin V production protein FDM99_14885 PF01180 Dihydroorotate dehydrogenase FDM99_14905 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FDM99_14905 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FDM99_14910 PF00881 Nitroreductase family FDM99_14920 PF00270 DEAD/DEAH box helicase FDM99_14920 PF00271 Helicase conserved C-terminal domain FDM99_14925 PF00313 'Cold-shock' DNA-binding domain FDM99_14935 PF04545 Sigma-70, region 4 FDM99_14935 PF04542 Sigma-70 region 2 FDM99_14935 PF00140 Sigma-70 factor, region 1.2 FDM99_14940 PF04241 Protein of unknown function (DUF423) FDM99_14950 PF05690 Thiazole biosynthesis protein ThiG FDM99_14970 PF00753 Metallo-beta-lactamase superfamily FDM99_14975 PF01546 Peptidase family M20/M25/M40 FDM99_14975 PF07687 Peptidase dimerisation domain FDM99_14985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDM99_14990 PF01817 Chorismate mutase type II FDM99_14990 PF01842 ACT domain FDM99_14990 PF00800 Prephenate dehydratase FDM99_14995 PF00756 Putative esterase FDM99_15000 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_15000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_15000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_15005 PF00375 Sodium:dicarboxylate symporter family FDM99_15015 PF00591 Glycosyl transferase family, a/b domain FDM99_15015 PF02885 Glycosyl transferase family, helical bundle domain FDM99_15020 PF07023 Protein of unknown function (DUF1315) FDM99_15025 PF01513 ATP-NAD kinase FDM99_15030 PF14814 Bifunctional transglycosylase second domain FDM99_15030 PF00905 Penicillin binding protein transpeptidase domain FDM99_15030 PF00912 Transglycosylase FDM99_15040 PF00293 NUDIX domain FDM99_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_15050 PF08521 Two-component sensor kinase N-terminal FDM99_15050 PF00512 His Kinase A (phospho-acceptor) domain FDM99_15055 PF00072 Response regulator receiver domain FDM99_15055 PF00486 Transcriptional regulatory protein, C terminal FDM99_15065 PF00437 Type II/IV secretion system protein FDM99_15075 PF01980 tRNA-methyltransferase O FDM99_15075 PF18389 TrmO C-terminal domain FDM99_15080 PF00175 Oxidoreductase NAD-binding domain FDM99_15080 PF00970 Oxidoreductase FAD-binding domain FDM99_15085 PF02567 Phenazine biosynthesis-like protein FDM99_15090 PF00392 Bacterial regulatory proteins, gntR family FDM99_15090 PF00155 Aminotransferase class I and II FDM99_15100 PF00037 4Fe-4S binding domain FDM99_15105 PF00893 Small Multidrug Resistance protein FDM99_15110 PF00005 ABC transporter FDM99_15115 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_15120 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_15125 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDM99_15130 PF03466 LysR substrate binding domain FDM99_15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_15135 PF13533 Biotin-lipoyl like FDM99_15140 PF00873 AcrB/AcrD/AcrF family FDM99_15145 PF02321 Outer membrane efflux protein FDM99_15150 PF00464 Serine hydroxymethyltransferase FDM99_15180 PF00005 ABC transporter FDM99_15185 PF01061 ABC-2 type transporter FDM99_15190 PF14489 QueF-like protein FDM99_15190 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDM99_15200 PF01098 Cell cycle protein FDM99_15205 PF13406 Transglycosylase SLT domain FDM99_15210 PF03330 Lytic transglycolase FDM99_15210 PF05036 Sporulation related domain FDM99_15230 PF12833 Helix-turn-helix domain FDM99_15240 PF00889 Elongation factor TS FDM99_15245 PF00318 Ribosomal protein S2 FDM99_15250 PF00557 Metallopeptidase family M24 FDM99_15260 PF07690 Major Facilitator Superfamily FDM99_15270 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_15270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDM99_15275 PF04055 Radical SAM superfamily FDM99_15280 PF09317 Domain of unknown function (DUF1974) FDM99_15280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_15280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_15295 PF05221 S-adenosyl-L-homocysteine hydrolase FDM99_15295 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FDM99_15300 PF02219 Methylenetetrahydrofolate reductase FDM99_15305 PF04452 RNA methyltransferase FDM99_15310 PF00990 Diguanylate cyclase, GGDEF domain FDM99_15310 PF00563 EAL domain FDM99_15310 PF03707 Bacterial signalling protein N terminal repeat FDM99_15315 PF01515 Phosphate acetyl/butaryl transferase FDM99_15315 PF03949 Malic enzyme, NAD binding domain FDM99_15315 PF00390 Malic enzyme, N-terminal domain FDM99_15320 PF12627 Probable RNA and SrmB- binding site of polymerase A FDM99_15320 PF01743 Poly A polymerase head domain FDM99_15325 PF13180 PDZ domain FDM99_15330 PF01784 NIF3 (NGG1p interacting factor 3) FDM99_15335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDM99_15335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDM99_15370 PF01040 UbiA prenyltransferase family FDM99_15375 PF04345 Chorismate lyase FDM99_15385 PF00854 POT family FDM99_15395 PF00117 Glutamine amidotransferase class-I FDM99_15400 PF11838 ERAP1-like C-terminal domain FDM99_15400 PF01433 Peptidase family M1 domain FDM99_15405 PF07715 TonB-dependent Receptor Plug Domain FDM99_15405 PF00593 TonB dependent receptor FDM99_15410 PF02885 Glycosyl transferase family, helical bundle domain FDM99_15410 PF00591 Glycosyl transferase family, a/b domain FDM99_15415 PF00218 Indole-3-glycerol phosphate synthase FDM99_15430 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FDM99_15430 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FDM99_15435 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_15435 PF01799 [2Fe-2S] binding domain FDM99_15445 PF00144 Beta-lactamase FDM99_15460 PF05675 Protein of unknown function (DUF817) FDM99_15465 PF01208 Uroporphyrinogen decarboxylase (URO-D) FDM99_15475 PF00425 chorismate binding enzyme FDM99_15485 PF00975 Thioesterase domain FDM99_15490 PF00005 ABC transporter FDM99_15490 PF00664 ABC transporter transmembrane region FDM99_15495 PF00664 ABC transporter transmembrane region FDM99_15495 PF00005 ABC transporter FDM99_15505 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDM99_15510 PF00550 Phosphopantetheine attachment site FDM99_15510 PF00857 Isochorismatase family FDM99_15515 PF00501 AMP-binding enzyme FDM99_15515 PF13193 AMP-binding enzyme C-terminal domain FDM99_15520 PF00668 Condensation domain FDM99_15520 PF00550 Phosphopantetheine attachment site FDM99_15520 PF00501 AMP-binding enzyme FDM99_15525 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FDM99_15530 PF07715 TonB-dependent Receptor Plug Domain FDM99_15530 PF00593 TonB dependent receptor FDM99_15535 PF01497 Periplasmic binding protein FDM99_15540 PF00005 ABC transporter FDM99_15545 PF01032 FecCD transport family FDM99_15550 PF01032 FecCD transport family FDM99_15555 PF00975 Thioesterase domain FDM99_15555 PF00501 AMP-binding enzyme FDM99_15555 PF13193 AMP-binding enzyme C-terminal domain FDM99_15555 PF00550 Phosphopantetheine attachment site FDM99_15555 PF00668 Condensation domain FDM99_15560 PF00501 AMP-binding enzyme FDM99_15560 PF00668 Condensation domain FDM99_15560 PF13193 AMP-binding enzyme C-terminal domain FDM99_15560 PF00550 Phosphopantetheine attachment site FDM99_15570 PF08348 YheO-like PAS domain FDM99_15570 PF13309 HTH domain FDM99_15575 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_15580 PF17954 Quercetinase C-terminal cupin domain FDM99_15580 PF02678 Pirin FDM99_15600 PF02653 Branched-chain amino acid transport system / permease component FDM99_15605 PF00005 ABC transporter FDM99_15610 PF13407 Periplasmic binding protein domain FDM99_15615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDM99_15615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FDM99_15620 PF07690 Major Facilitator Superfamily FDM99_15635 PF07690 Major Facilitator Superfamily FDM99_15645 PF00083 Sugar (and other) transporter FDM99_15655 PF03466 LysR substrate binding domain FDM99_15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_15660 PF00775 Dioxygenase FDM99_15660 PF04444 Catechol dioxygenase N terminus FDM99_15665 PF01144 Coenzyme A transferase FDM99_15670 PF01144 Coenzyme A transferase FDM99_15675 PF02803 Thiolase, C-terminal domain FDM99_15675 PF00108 Thiolase, N-terminal domain FDM99_15685 PF00465 Iron-containing alcohol dehydrogenase FDM99_15690 PF02264 LamB porin FDM99_15710 PF04328 Selenoprotein, putative FDM99_15715 PF13722 5TM C-terminal transporter carbon starvation CstA FDM99_15715 PF02554 Carbon starvation protein CstA FDM99_15720 PF01132 Elongation factor P (EF-P) OB domain FDM99_15720 PF09285 Elongation factor P, C-terminal FDM99_15720 PF08207 Elongation factor P (EF-P) KOW-like domain FDM99_15725 PF04055 Radical SAM superfamily FDM99_15735 PF12792 CSS motif domain associated with EAL FDM99_15735 PF00563 EAL domain FDM99_15740 PF01197 Ribosomal protein L31 FDM99_15745 PF13593 SBF-like CPA transporter family (DUF4137) FDM99_15750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDM99_15755 PF07690 Major Facilitator Superfamily FDM99_15760 PF13654 AAA domain FDM99_15760 PF05362 Lon protease (S16) C-terminal proteolytic domain FDM99_15765 PF03466 LysR substrate binding domain FDM99_15765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_15770 PF01476 LysM domain FDM99_15770 PF01551 Peptidase family M23 FDM99_15775 PF01975 Survival protein SurE FDM99_15790 PF00768 D-alanyl-D-alanine carboxypeptidase FDM99_15790 PF07943 Penicillin-binding protein 5, C-terminal domain FDM99_15795 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_15800 PF00293 NUDIX domain FDM99_15810 PF04356 Protein of unknown function (DUF489) FDM99_15815 PF08328 Adenylosuccinate lyase C-terminal FDM99_15815 PF00206 Lyase FDM99_15830 PF01343 Peptidase family S49 FDM99_15830 PF08496 Peptidase family S49 N-terminal FDM99_15835 PF00005 ABC transporter FDM99_15840 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_15845 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_15850 PF12849 PBP superfamily domain FDM99_15855 PF00324 Amino acid permease FDM99_15860 PF00205 Thiamine pyrophosphate enzyme, central domain FDM99_15860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDM99_15860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDM99_15865 PF01037 Lrp/AsnC ligand binding domain FDM99_15870 PF00171 Aldehyde dehydrogenase family FDM99_15875 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDM99_15880 PF00202 Aminotransferase class-III FDM99_15895 PF02525 Flavodoxin-like fold FDM99_15900 PF00487 Fatty acid desaturase FDM99_15905 PF00111 2Fe-2S iron-sulfur cluster binding domain FDM99_15905 PF00970 Oxidoreductase FAD-binding domain FDM99_15905 PF00175 Oxidoreductase NAD-binding domain FDM99_15910 PF00440 Bacterial regulatory proteins, tetR family FDM99_15925 PF00849 RNA pseudouridylate synthase FDM99_15935 PF00202 Aminotransferase class-III FDM99_15940 PF02581 Thiamine monophosphate synthase FDM99_15965 PF05193 Peptidase M16 inactive domain FDM99_15965 PF00675 Insulinase (Peptidase family M16) FDM99_15970 PF02567 Phenazine biosynthesis-like protein FDM99_15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_15980 PF03466 LysR substrate binding domain FDM99_15985 PF06779 Uncharacterised MFS-type transporter YbfB FDM99_16005 PF00180 Isocitrate/isopropylmalate dehydrogenase FDM99_16010 PF00849 RNA pseudouridylate synthase FDM99_16015 PF03971 Monomeric isocitrate dehydrogenase FDM99_16025 PF07943 Penicillin-binding protein 5, C-terminal domain FDM99_16025 PF00768 D-alanyl-D-alanine carboxypeptidase FDM99_16030 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_16035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDM99_16040 PF03441 FAD binding domain of DNA photolyase FDM99_16040 PF00875 DNA photolyase FDM99_16070 PF02350 UDP-N-acetylglucosamine 2-epimerase FDM99_16085 PF03060 Nitronate monooxygenase FDM99_16090 PF01207 Dihydrouridine synthase (Dus) FDM99_16095 PF07759 Protein of unknown function (DUF1615) FDM99_16105 PF01472 PUA domain FDM99_16105 PF00696 Amino acid kinase family FDM99_16110 PF01926 50S ribosome-binding GTPase FDM99_16110 PF01018 GTP1/OBG FDM99_16125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDM99_16125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDM99_16130 PF00892 EamA-like transporter family FDM99_16140 PF04851 Type III restriction enzyme, res subunit FDM99_16140 PF02151 UvrB/uvrC motif FDM99_16140 PF00271 Helicase conserved C-terminal domain FDM99_16140 PF12344 Ultra-violet resistance protein B FDM99_16140 PF17757 UvrB interaction domain FDM99_16150 PF00990 Diguanylate cyclase, GGDEF domain FDM99_16150 PF17151 Periplasmic sensor domain FDM99_16170 PF00012 Hsp70 protein FDM99_16200 PF00106 short chain dehydrogenase FDM99_16205 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FDM99_16210 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDM99_16215 PF02565 Recombination protein O C terminal FDM99_16215 PF11967 Recombination protein O N terminal FDM99_16225 PF01926 50S ribosome-binding GTPase FDM99_16225 PF07650 KH domain FDM99_16230 PF00035 Double-stranded RNA binding motif FDM99_16230 PF14622 Ribonuclease-III-like FDM99_16240 PF10502 Signal peptidase, peptidase S26 FDM99_16245 PF06421 GTP-binding protein LepA C-terminus FDM99_16245 PF03144 Elongation factor Tu domain 2 FDM99_16245 PF00009 Elongation factor Tu GTP binding domain FDM99_16245 PF00679 Elongation factor G C-terminus FDM99_16250 PF13302 Acetyltransferase (GNAT) domain FDM99_16260 PF13180 PDZ domain FDM99_16265 PF00890 FAD binding domain FDM99_16265 PF02910 Fumarate reductase flavoprotein C-term FDM99_16275 PF02223 Thymidylate kinase FDM99_16280 PF02618 YceG-like family FDM99_16285 PF01063 Amino-transferase class IV FDM99_16300 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_16305 PF00528 Binding-protein-dependent transport system inner membrane component FDM99_16310 PF12857 TOBE-like domain FDM99_16310 PF00005 ABC transporter FDM99_16315 PF03466 LysR substrate binding domain FDM99_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_16325 PF14602 Hexapeptide repeat of succinyl-transferase FDM99_16325 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FDM99_16325 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_16335 PF06508 Queuosine biosynthesis protein QueC FDM99_16350 PF00578 AhpC/TSA family FDM99_16360 PF01467 Cytidylyltransferase-like FDM99_16360 PF00293 NUDIX domain FDM99_16365 PF00378 Enoyl-CoA hydratase/isomerase FDM99_16370 PF01784 NIF3 (NGG1p interacting factor 3) FDM99_16375 PF07690 Major Facilitator Superfamily FDM99_16380 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FDM99_16380 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FDM99_16380 PF02769 AIR synthase related protein, C-terminal domain FDM99_16385 PF01966 HD domain FDM99_16390 PF01330 RuvA N terminal domain FDM99_16390 PF07499 RuvA, C-terminal domain FDM99_16395 PF05491 RuvB C-terminal winged helix domain FDM99_16395 PF17864 RuvB AAA lid domain FDM99_16395 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDM99_16400 PF01546 Peptidase family M20/M25/M40 FDM99_16400 PF07687 Peptidase dimerisation domain FDM99_16405 PF03061 Thioesterase superfamily FDM99_16410 PF01618 MotA/TolQ/ExbB proton channel family FDM99_16415 PF02472 Biopolymer transport protein ExbD/TolR FDM99_16425 PF04052 TolB amino-terminal domain FDM99_16425 PF07676 WD40-like Beta Propeller Repeat FDM99_16430 PF00691 OmpA family FDM99_16440 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FDM99_16445 PF00588 SpoU rRNA Methylase family FDM99_16445 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDM99_16470 PF11638 DnaA N-terminal domain FDM99_16470 PF08299 Bacterial dnaA protein helix-turn-helix FDM99_16470 PF00308 Bacterial dnaA protein FDM99_16475 PF01594 AI-2E family transporter FDM99_16480 PF00586 AIR synthase related protein, N-terminal domain FDM99_16480 PF02769 AIR synthase related protein, C-terminal domain FDM99_16485 PF00551 Formyl transferase FDM99_16490 PF12697 Alpha/beta hydrolase family FDM99_16495 PF06965 Na+/H+ antiporter 1 FDM99_16495 PF01343 Peptidase family S49 FDM99_16510 PF00005 ABC transporter FDM99_16515 PF02687 FtsX-like permease family FDM99_16515 PF12704 MacB-like periplasmic core domain FDM99_16525 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDM99_16535 PF00266 Aminotransferase class-V FDM99_16545 PF13533 Biotin-lipoyl like FDM99_16565 PF00535 Glycosyl transferase family 2 FDM99_16580 PF00521 DNA gyrase/topoisomerase IV, subunit A FDM99_16580 PF03989 DNA gyrase C-terminal domain, beta-propeller FDM99_16585 PF01012 Electron transfer flavoprotein domain FDM99_16585 PF00766 Electron transfer flavoprotein FAD-binding domain FDM99_16590 PF01012 Electron transfer flavoprotein domain FDM99_16595 PF02899 Phage integrase, N-terminal SAM-like domain FDM99_16595 PF00589 Phage integrase family FDM99_16600 PF01810 LysE type translocator FDM99_16605 PF01678 Diaminopimelate epimerase FDM99_16610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDM99_16610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDM99_16620 PF00324 Amino acid permease FDM99_16625 PF18073 Rubredoxin metal binding domain FDM99_16635 PF00152 tRNA synthetases class II (D, K and N) FDM99_16640 PF11890 Domain of unknown function (DUF3410) FDM99_16640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDM99_16640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDM99_16645 PF06803 Protein of unknown function (DUF1232) FDM99_16650 PF02634 FdhD/NarQ family FDM99_16655 PF00384 Molybdopterin oxidoreductase FDM99_16660 PF02595 Glycerate kinase family FDM99_16675 PF00881 Nitroreductase family FDM99_16705 PF00501 AMP-binding enzyme FDM99_16705 PF00668 Condensation domain FDM99_16705 PF00550 Phosphopantetheine attachment site FDM99_16705 PF00975 Thioesterase domain FDM99_16705 PF13193 AMP-binding enzyme C-terminal domain FDM99_16740 PF03449 Transcription elongation factor, N-terminal FDM99_16740 PF01272 Transcription elongation factor, GreA/GreB, C-term FDM99_16775 PF03449 Transcription elongation factor, N-terminal FDM99_16775 PF01272 Transcription elongation factor, GreA/GreB, C-term FDM99_16780 PF01464 Transglycosylase SLT domain FDM99_16780 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDM99_16790 PF01171 PP-loop family FDM99_16800 PF01464 Transglycosylase SLT domain FDM99_16805 PF01435 Peptidase family M48 FDM99_16815 PF00873 AcrB/AcrD/AcrF family FDM99_16820 PF03009 Glycerophosphoryl diester phosphodiesterase family FDM99_16825 PF00753 Metallo-beta-lactamase superfamily FDM99_16830 PF01219 Prokaryotic diacylglycerol kinase FDM99_16835 PF00118 TCP-1/cpn60 chaperonin family FDM99_16840 PF00166 Chaperonin 10 Kd subunit FDM99_16855 PF00149 Calcineurin-like phosphoesterase FDM99_16860 PF00781 Diacylglycerol kinase catalytic domain FDM99_16865 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FDM99_16865 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FDM99_16870 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FDM99_16870 PF01266 FAD dependent oxidoreductase FDM99_16875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDM99_16875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDM99_16880 PF00083 Sugar (and other) transporter FDM99_16895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FDM99_16895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FDM99_16910 PF09423 PhoD-like phosphatase FDM99_16910 PF16655 PhoD-like phosphatase, N-terminal domain FDM99_16930 PF00809 Pterin binding enzyme FDM99_16935 PF01434 Peptidase family M41 FDM99_16935 PF06480 FtsH Extracellular FDM99_16935 PF17862 AAA+ lid domain FDM99_16935 PF00004 ATPase family associated with various cellular activities (AAA) FDM99_16940 PF01728 FtsJ-like methyltransferase FDM99_16945 PF01985 CRS1 / YhbY (CRM) domain FDM99_16960 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FDM99_16960 PF00117 Glutamine amidotransferase class-I FDM99_16965 PF02142 MGS-like domain FDM99_16965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FDM99_16965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDM99_16970 PF01272 Transcription elongation factor, GreA/GreB, C-term FDM99_16970 PF03449 Transcription elongation factor, N-terminal FDM99_16975 PF00132 Bacterial transferase hexapeptide (six repeats) FDM99_16980 PF00582 Universal stress protein family FDM99_16985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDM99_17010 PF00999 Sodium/hydrogen exchanger family FDM99_17015 PF04228 Putative neutral zinc metallopeptidase FDM99_17020 PF05661 Protein of unknown function (DUF808) FDM99_17025 PF00579 tRNA synthetases class I (W and Y) FDM99_17030 PF02629 CoA binding domain FDM99_17030 PF00549 CoA-ligase FDM99_17035 PF08442 ATP-grasp domain FDM99_17035 PF00549 CoA-ligase FDM99_17040 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDM99_17040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDM99_17045 PF02817 e3 binding domain FDM99_17045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDM99_17045 PF00364 Biotin-requiring enzyme FDM99_17050 PF16078 2-oxoglutarate dehydrogenase N-terminus FDM99_17050 PF00676 Dehydrogenase E1 component FDM99_17050 PF02779 Transketolase, pyrimidine binding domain FDM99_17050 PF16870 2-oxoglutarate dehydrogenase C-terminal FDM99_17065 PF13085 2Fe-2S iron-sulfur cluster binding domain FDM99_17070 PF02910 Fumarate reductase flavoprotein C-term FDM99_17070 PF00890 FAD binding domain FDM99_17075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDM99_17080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDM99_17085 PF00285 Citrate synthase, C-terminal domain FDM99_17110 PF04539 Sigma-70 region 3 FDM99_17110 PF04546 Sigma-70, non-essential region FDM99_17110 PF04542 Sigma-70 region 2 FDM99_17110 PF00140 Sigma-70 factor, region 1.2 FDM99_17110 PF03979 Sigma-70 factor, region 1.1 FDM99_17110 PF04545 Sigma-70, region 4 FDM99_17115 PF04359 Protein of unknown function (DUF493) FDM99_17120 PF03099 Biotin/lipoate A/B protein ligase family FDM99_17130 PF00465 Iron-containing alcohol dehydrogenase FDM99_17135 PF13520 Amino acid permease FDM99_17140 PF03358 NADPH-dependent FMN reductase FDM99_17145 PF01638 HxlR-like helix-turn-helix FDM99_17150 PF00588 SpoU rRNA Methylase family FDM99_17155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDM99_17155 PF10414 Sirohaem synthase dimerisation region FDM99_17155 PF14824 Sirohaem biosynthesis protein central FDM99_17160 PF02403 Seryl-tRNA synthetase N-terminal domain FDM99_17160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDM99_17170 PF03548 Outer membrane lipoprotein carrier protein LolA FDM99_17175 PF01016 Ribosomal L27 protein FDM99_17180 PF00829 Ribosomal prokaryotic L21 protein FDM99_17190 PF00348 Polyprenyl synthetase FDM99_17200 PF01569 PAP2 superfamily FDM99_17205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDM99_17205 PF00529 HlyD membrane-fusion protein of T1SS FDM99_17210 PF00873 AcrB/AcrD/AcrF family FDM99_17215 PF02321 Outer membrane efflux protein FDM99_17220 PF01906 Putative heavy-metal-binding FDM99_17225 PF01906 Putative heavy-metal-binding FDM99_17245 PF10458 Valyl tRNA synthetase tRNA binding arm FDM99_17245 PF08264 Anticodon-binding domain of tRNA FDM99_17245 PF00133 tRNA synthetases class I (I, L, M and V) FDM99_17265 PF03466 LysR substrate binding domain FDM99_17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDM99_17275 PF00909 Ammonium Transporter Family FDM99_17285 PF08521 Two-component sensor kinase N-terminal FDM99_17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_17285 PF00512 His Kinase A (phospho-acceptor) domain FDM99_17290 PF00486 Transcriptional regulatory protein, C terminal FDM99_17290 PF00072 Response regulator receiver domain FDM99_17295 PF08019 Phosphoethanolamine transferase EptA/EptB FDM99_17295 PF00884 Sulfatase FDM99_17315 PF01734 Patatin-like phospholipase FDM99_17325 PF01145 SPFH domain / Band 7 family FDM99_17330 PF04237 YjbR FDM99_17335 PF00348 Polyprenyl synthetase FDM99_17340 PF04303 PrpF protein FDM99_17345 PF00324 Amino acid permease FDM99_17385 PF01965 DJ-1/PfpI family FDM99_17390 PF16197 Ketoacyl-synthetase C-terminal extension FDM99_17390 PF09277 Erythronolide synthase, docking FDM99_17390 PF08659 KR domain FDM99_17390 PF02801 Beta-ketoacyl synthase, C-terminal domain FDM99_17390 PF00109 Beta-ketoacyl synthase, N-terminal domain FDM99_17390 PF00550 Phosphopantetheine attachment site FDM99_17390 PF14765 Polyketide synthase dehydratase FDM99_17390 PF08990 Erythronolide synthase docking FDM99_17390 PF00698 Acyl transferase domain FDM99_17390 PF08240 Alcohol dehydrogenase GroES-like domain FDM99_17395 PF12833 Helix-turn-helix domain FDM99_17395 PF06719 AraC-type transcriptional regulator N-terminus FDM99_17400 PF02673 Bacitracin resistance protein BacA FDM99_17420 PF02525 Flavodoxin-like fold FDM99_17435 PF01507 Phosphoadenosine phosphosulfate reductase family FDM99_17445 PF06974 Protein of unknown function (DUF1298) FDM99_17445 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FDM99_17455 PF10150 Ribonuclease E/G family FDM99_17455 PF00575 S1 RNA binding domain FDM99_17460 PF02545 Maf-like protein FDM99_17465 PF04093 rod shape-determining protein MreD FDM99_17470 PF04085 rod shape-determining protein MreC FDM99_17480 PF02686 Glu-tRNAGln amidotransferase C subunit FDM99_17485 PF01425 Amidase FDM99_17490 PF02934 GatB/GatE catalytic domain FDM99_17490 PF02637 GatB domain FDM99_17515 PF01431 Peptidase family M13 FDM99_17515 PF05649 Peptidase family M13 FDM99_17520 PF05992 SbmA/BacA-like family FDM99_17525 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_17525 PF13291 ACT domain FDM99_17530 PF01734 Patatin-like phospholipase FDM99_17535 PF01235 Sodium:alanine symporter family FDM99_17550 PF00881 Nitroreductase family FDM99_17555 PF07690 Major Facilitator Superfamily FDM99_17560 PF12805 FUSC-like inner membrane protein yccS FDM99_17570 PF00667 FAD binding domain FDM99_17570 PF00175 Oxidoreductase NAD-binding domain FDM99_17570 PF00258 Flavodoxin FDM99_17610 PF17969 L,D-transpeptidase C-terminal domain FDM99_17610 PF03734 L,D-transpeptidase catalytic domain FDM99_17615 PF04304 Protein of unknown function (DUF454) FDM99_17625 PF08085 Entericidin EcnA/B family FDM99_17630 PF01546 Peptidase family M20/M25/M40 FDM99_17630 PF07687 Peptidase dimerisation domain FDM99_17645 PF01584 CheW-like domain FDM99_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_17645 PF01627 Hpt domain FDM99_17645 PF00072 Response regulator receiver domain FDM99_17650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDM99_17650 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDM99_17655 PF01584 CheW-like domain FDM99_17660 PF00072 Response regulator receiver domain FDM99_17665 PF00072 Response regulator receiver domain FDM99_17680 PF00873 AcrB/AcrD/AcrF family FDM99_17685 PF04073 Aminoacyl-tRNA editing domain FDM99_17685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDM99_17685 PF03129 Anticodon binding domain FDM99_17690 PF07411 Domain of unknown function (DUF1508) FDM99_17695 PF08274 PhnA Zinc-Ribbon FDM99_17695 PF03831 PhnA domain FDM99_17700 PF04343 Protein of unknown function, DUF488 FDM99_17710 PF01571 Aminomethyltransferase folate-binding domain FDM99_17715 PF13098 Thioredoxin-like domain FDM99_17715 PF10411 Disulfide bond isomerase protein N-terminus FDM99_17725 PF03547 Membrane transport protein FDM99_17730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDM99_17735 PF07715 TonB-dependent Receptor Plug Domain FDM99_17735 PF00593 TonB dependent receptor FDM99_17740 PF02245 Methylpurine-DNA glycosylase (MPG) FDM99_17745 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FDM99_17745 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FDM99_17745 PF06827 Zinc finger found in FPG and IleRS FDM99_17760 PF01741 Large-conductance mechanosensitive channel, MscL FDM99_17770 PF00860 Permease family FDM99_17780 PF00324 Amino acid permease FDM99_17785 PF01139 tRNA-splicing ligase RtcB FDM99_17790 PF13505 Outer membrane protein beta-barrel domain FDM99_17790 PF00691 OmpA family FDM99_17800 PF02803 Thiolase, C-terminal domain FDM99_17800 PF00108 Thiolase, N-terminal domain FDM99_17810 PF00893 Small Multidrug Resistance protein FDM99_17820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDM99_17820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDM99_17825 PF01011 PQQ enzyme repeat FDM99_17830 PF04966 Carbohydrate-selective porin, OprB family FDM99_17835 PF02515 CoA-transferase family III FDM99_17840 PF12833 Helix-turn-helix domain FDM99_17840 PF02311 AraC-like ligand binding domain FDM99_17845 PF00108 Thiolase, N-terminal domain FDM99_17845 PF02803 Thiolase, C-terminal domain FDM99_17850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDM99_17850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDM99_17850 PF00378 Enoyl-CoA hydratase/isomerase FDM99_17875 PF03006 Haemolysin-III related FDM99_17880 PF07690 Major Facilitator Superfamily FDM99_17880 PF00083 Sugar (and other) transporter FDM99_17890 PF02810 SEC-C motif FDM99_17890 PF07517 SecA DEAD-like domain FDM99_17890 PF01043 SecA preprotein cross-linking domain FDM99_17890 PF07516 SecA Wing and Scaffold domain FDM99_17895 PF00578 AhpC/TSA family FDM99_17895 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDM99_17900 PF00753 Metallo-beta-lactamase superfamily FDM99_17915 PF02875 Mur ligase family, glutamate ligase domain FDM99_17915 PF08245 Mur ligase middle domain FDM99_17920 PF01039 Carboxyl transferase domain FDM99_17925 PF00290 Tryptophan synthase alpha chain FDM99_17950 PF00291 Pyridoxal-phosphate dependent enzyme FDM99_17955 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDM99_17960 PF00593 TonB dependent receptor FDM99_17960 PF07715 TonB-dependent Receptor Plug Domain FDM99_17965 PF01923 Cobalamin adenosyltransferase FDM99_17970 PF03009 Glycerophosphoryl diester phosphodiesterase family FDM99_17985 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FDM99_17990 PF00486 Transcriptional regulatory protein, C terminal FDM99_17990 PF00072 Response regulator receiver domain FDM99_17995 PF00512 His Kinase A (phospho-acceptor) domain FDM99_17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_17995 PF00672 HAMP domain FDM99_18005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_18005 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_18005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_18005 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDM99_18010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDM99_18010 PF02770 Acyl-CoA dehydrogenase, middle domain FDM99_18010 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDM99_18010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDM99_18015 PF06146 Phosphate-starvation-inducible E FDM99_18035 PF07715 TonB-dependent Receptor Plug Domain FDM99_18035 PF00593 TonB dependent receptor FDM99_18045 PF02938 GAD domain FDM99_18045 PF00152 tRNA synthetases class II (D, K and N) FDM99_18045 PF01336 OB-fold nucleic acid binding domain FDM99_18070 PF13439 Glycosyltransferase Family 4 FDM99_18070 PF00534 Glycosyl transferases group 1 FDM99_18075 PF00535 Glycosyl transferase family 2 FDM99_18080 PF01522 Polysaccharide deacetylase FDM99_18095 PF01063 Amino-transferase class IV FDM99_18100 PF08335 GlnD PII-uridylyltransferase FDM99_18100 PF03710 Glutamate-ammonia ligase adenylyltransferase FDM99_18105 PF07689 KaiB domain FDM99_18105 PF00512 His Kinase A (phospho-acceptor) domain FDM99_18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDM99_18115 PF02547 Queuosine biosynthesis protein FDM99_18135 PF01702 Queuine tRNA-ribosyltransferase FDM99_18140 PF02699 Preprotein translocase subunit FDM99_18145 PF07549 SecD/SecF GG Motif FDM99_18145 PF13721 SecD export protein N-terminal TM region FDM99_18145 PF02355 Protein export membrane protein FDM99_18150 PF07549 SecD/SecF GG Motif FDM99_18150 PF02355 Protein export membrane protein FDM99_18155 PF02441 Flavoprotein FDM99_18155 PF04127 DNA / pantothenate metabolism flavoprotein FDM99_18160 PF04002 RadC-like JAB domain FDM99_18165 PF01062 Bestrophin, RFP-TM, chloride channel FDM99_18170 PF02811 PHP domain FDM99_18175 PF04279 Intracellular septation protein A FDM99_18180 PF03795 YCII-related domain FDM99_18230 PF05973 Phage derived protein Gp49-like (DUF891) FDM99_18280 PF05973 Phage derived protein Gp49-like (DUF891) FDM99_18360 PF05973 Phage derived protein Gp49-like (DUF891) FDM99_18385 PF01051 Initiator Replication protein