locus-tag class description EA743_000005 PF11638 DnaA N-terminal domain EA743_000005 PF08299 Bacterial dnaA protein helix-turn-helix EA743_000005 PF00308 Bacterial dnaA protein EA743_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain EA743_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain EA743_000010 PF02767 DNA polymerase III beta subunit, central domain EA743_000015 PF02463 RecF/RecN/SMC N terminal domain EA743_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_000020 PF01751 Toprim domain EA743_000020 PF00986 DNA gyrase B subunit, carboxyl terminus EA743_000020 PF00204 DNA gyrase B EA743_000020 PF18053 DNA gyrase B subunit insert domain EA743_000030 PF09335 SNARE associated Golgi protein EA743_000035 PF00005 ABC transporter EA743_000035 PF12848 ABC transporter EA743_000055 PF01521 Iron-sulphur cluster biosynthesis EA743_000060 PF00561 alpha/beta hydrolase fold EA743_000065 PF03702 Anhydro-N-acetylmuramic acid kinase EA743_000070 PF00579 tRNA synthetases class I (W and Y) EA743_000115 PF00209 Sodium:neurotransmitter symporter family EA743_000125 PF01029 NusB family EA743_000125 PF01189 16S rRNA methyltransferase RsmB/F EA743_000130 PF02911 Formyl transferase, C-terminal domain EA743_000130 PF00551 Formyl transferase EA743_000135 PF00920 Dehydratase family EA743_000150 PF03466 LysR substrate binding domain EA743_000150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_000155 PF00860 Permease family EA743_000160 PF00311 Phosphoenolpyruvate carboxylase EA743_000165 PF08361 MAATS-type transcriptional repressor, C-terminal region EA743_000165 PF00440 Bacterial regulatory proteins, tetR family EA743_000170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_000175 PF00873 AcrB/AcrD/AcrF family EA743_000185 PF00226 DnaJ domain EA743_000185 PF00684 DnaJ central domain EA743_000185 PF01556 DnaJ C terminal domain EA743_000195 PF01113 Dihydrodipicolinate reductase, N-terminus EA743_000195 PF05173 Dihydrodipicolinate reductase, C-terminus EA743_000205 PF07690 Major Facilitator Superfamily EA743_000210 PF00248 Aldo/keto reductase family EA743_000215 PF03466 LysR substrate binding domain EA743_000215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_000230 PF00155 Aminotransferase class I and II EA743_000230 PF00392 Bacterial regulatory proteins, gntR family EA743_000235 PF00107 Zinc-binding dehydrogenase EA743_000235 PF08240 Alcohol dehydrogenase GroES-like domain EA743_000240 PF03352 Methyladenine glycosylase EA743_000255 PF10576 Iron-sulfur binding domain of endonuclease III EA743_000255 PF00730 HhH-GPD superfamily base excision DNA repair protein EA743_000255 PF14815 NUDIX domain EA743_000255 PF00633 Helix-hairpin-helix motif EA743_000270 PF07043 Protein of unknown function (DUF1328) EA743_000275 PF03692 Putative zinc- or iron-chelating domain EA743_000280 PF07995 Glucose / Sorbosone dehydrogenase EA743_000285 PF12002 MgsA AAA+ ATPase C terminal EA743_000285 PF16193 AAA C-terminal domain EA743_000285 PF00004 ATPase family associated with various cellular activities (AAA) EA743_000290 PF01226 Formate/nitrite transporter EA743_000300 PF01259 SAICAR synthetase EA743_000310 PF00701 Dihydrodipicolinate synthetase family EA743_000315 PF00857 Isochorismatase family EA743_000320 PF01758 Sodium Bile acid symporter family EA743_000330 PF04463 Protein of unknown function (DUF523) EA743_000335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EA743_000345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EA743_000350 PF14497 Glutathione S-transferase, C-terminal domain EA743_000350 PF02798 Glutathione S-transferase, N-terminal domain EA743_000360 PF00324 Amino acid permease EA743_000370 PF02492 CobW/HypB/UreG, nucleotide-binding domain EA743_000370 PF07683 Cobalamin synthesis protein cobW C-terminal domain EA743_000380 PF07702 UTRA domain EA743_000380 PF00392 Bacterial regulatory proteins, gntR family EA743_000400 PF00005 ABC transporter EA743_000405 PF01636 Phosphotransferase enzyme family EA743_000410 PF10706 Aminoglycoside-2''-adenylyltransferase EA743_000415 PF13610 DDE domain EA743_000430 PF01636 Phosphotransferase enzyme family EA743_000435 PF13610 DDE domain EA743_000450 PF07690 Major Facilitator Superfamily EA743_000455 PF03466 LysR substrate binding domain EA743_000455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_000470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EA743_000470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EA743_000470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EA743_000470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EA743_000475 PF00809 Pterin binding enzyme EA743_000505 PF13817 IS66 C-terminal element EA743_000505 PF03050 Transposase IS66 family EA743_000505 PF13007 Transposase C of IS166 homeodomain EA743_000505 PF13005 zinc-finger binding domain of transposase IS66 EA743_000560 PF00717 Peptidase S24-like EA743_000565 PF11799 impB/mucB/samB family C-terminal domain EA743_000565 PF11798 IMS family HHH motif EA743_000565 PF13438 Domain of unknown function (DUF4113) EA743_000565 PF00817 impB/mucB/samB family EA743_000600 PF13610 DDE domain EA743_000610 PF01175 Urocanase Rossmann-like domain EA743_000610 PF17392 Urocanase C-terminal domain EA743_000610 PF17391 Urocanase N-terminal domain EA743_000615 PF00221 Aromatic amino acid lyase EA743_000620 PF00324 Amino acid permease EA743_000625 PF01979 Amidohydrolase family EA743_000630 PF00491 Arginase family EA743_000645 PF01177 Asp/Glu/Hydantoin racemase EA743_000650 PF01380 SIS domain EA743_000655 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_000655 PF14602 Hexapeptide repeat of succinyl-transferase EA743_000655 PF12804 MobA-like NTP transferase domain EA743_000660 PF04608 Phosphatidylglycerophosphatase A EA743_000665 PF02769 AIR synthase related protein, C-terminal domain EA743_000665 PF00586 AIR synthase related protein, N-terminal domain EA743_000670 PF01029 NusB family EA743_000675 PF00885 6,7-dimethyl-8-ribityllumazine synthase EA743_000680 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EA743_000680 PF00925 GTP cyclohydrolase II EA743_000710 PF02580 D-Tyr-tRNA(Tyr) deacylase EA743_000715 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EA743_000715 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EA743_000720 PF00581 Rhodanese-like domain EA743_000725 PF02666 Phosphatidylserine decarboxylase EA743_000735 PF11808 Phosphate regulon sensor protein PhoR EA743_000735 PF00512 His Kinase A (phospho-acceptor) domain EA743_000735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_000735 PF00989 PAS fold EA743_000740 PF00486 Transcriptional regulatory protein, C terminal EA743_000740 PF00072 Response regulator receiver domain EA743_000750 PF00106 short chain dehydrogenase EA743_000755 PF01554 MatE EA743_000760 PF00155 Aminotransferase class I and II EA743_000765 PF04286 Protein of unknown function (DUF445) EA743_000780 PF04262 Glutamate-cysteine ligase EA743_000785 PF02600 Disulfide bond formation protein DsbB EA743_000790 PF04717 Type VI secretion system, phage-baseplate injector EA743_000795 PF00182 Chitinase class I EA743_000810 PF05728 Uncharacterised protein family (UPF0227) EA743_000815 PF00204 DNA gyrase B EA743_000815 PF01751 Toprim domain EA743_000815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_000815 PF00986 DNA gyrase B subunit, carboxyl terminus EA743_000820 PF04115 Ureidoglycolate lyase EA743_000825 PF03561 Allantoicase repeat EA743_000830 PF01494 FAD binding domain EA743_000840 PF00860 Permease family EA743_000845 PF00576 HIUase/Transthyretin family EA743_000875 PF02683 Cytochrome C biogenesis protein transmembrane region EA743_000875 PF11412 Disulphide bond corrector protein DsbC EA743_000880 PF07694 5TMR of 5TMR-LYT EA743_000880 PF00990 Diguanylate cyclase, GGDEF domain EA743_000885 PF07859 alpha/beta hydrolase fold EA743_000895 PF03960 ArsC family EA743_000900 PF03372 Endonuclease/Exonuclease/phosphatase family EA743_000905 PF00156 Phosphoribosyl transferase domain EA743_000915 PF07715 TonB-dependent Receptor Plug Domain EA743_000915 PF00593 TonB dependent receptor EA743_000925 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EA743_000925 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EA743_000930 PF03033 Glycosyltransferase family 28 N-terminal domain EA743_000930 PF04101 Glycosyltransferase family 28 C-terminal domain EA743_000935 PF08245 Mur ligase middle domain EA743_000935 PF01225 Mur ligase family, catalytic domain EA743_000935 PF02875 Mur ligase family, glutamate ligase domain EA743_000940 PF01820 D-ala D-ala ligase N-terminus EA743_000940 PF07478 D-ala D-ala ligase C-terminus EA743_000945 PF08478 POTRA domain, FtsQ-type EA743_000945 PF03799 Cell division protein FtsQ EA743_000950 PF02491 SHS2 domain inserted in FTSA EA743_000955 PF12327 FtsZ family, C-terminal domain EA743_000955 PF00091 Tubulin/FtsZ family, GTPase domain EA743_000960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EA743_000970 PF01551 Peptidase family M23 EA743_000975 PF00456 Transketolase, thiamine diphosphate binding domain EA743_000975 PF17831 Pyruvate dehydrogenase E1 component middle domain EA743_000980 PF00364 Biotin-requiring enzyme EA743_000980 PF02817 e3 binding domain EA743_000980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EA743_000990 PF01169 Uncharacterized protein family UPF0016 EA743_000995 PF07715 TonB-dependent Receptor Plug Domain EA743_000995 PF00593 TonB dependent receptor EA743_001000 PF00258 Flavodoxin EA743_001000 PF01613 Flavin reductase like domain EA743_001005 PF03692 Putative zinc- or iron-chelating domain EA743_001010 PF00478 IMP dehydrogenase / GMP reductase domain EA743_001010 PF00571 CBS domain EA743_001015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EA743_001015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EA743_001015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EA743_001015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EA743_001020 PF01243 Pyridoxamine 5'-phosphate oxidase EA743_001020 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EA743_001025 PF17768 RecJ OB domain EA743_001025 PF02272 DHHA1 domain EA743_001025 PF01368 DHH family EA743_001050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_001055 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EA743_001060 PF04452 RNA methyltransferase EA743_001065 PF00924 Mechanosensitive ion channel EA743_001075 PF13193 AMP-binding enzyme C-terminal domain EA743_001075 PF00501 AMP-binding enzyme EA743_001075 PF16177 Acetyl-coenzyme A synthetase N-terminus EA743_001080 PF00857 Isochorismatase family EA743_001085 PF01037 Lrp/AsnC ligand binding domain EA743_001090 PF00296 Luciferase-like monooxygenase EA743_001095 PF03358 NADPH-dependent FMN reductase EA743_001100 PF00072 Response regulator receiver domain EA743_001100 PF00196 Bacterial regulatory proteins, luxR family EA743_001110 PF01627 Hpt domain EA743_001110 PF00512 His Kinase A (phospho-acceptor) domain EA743_001110 PF00072 Response regulator receiver domain EA743_001110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_001110 PF00672 HAMP domain EA743_001115 PF04341 Protein of unknown function, DUF485 EA743_001120 PF00474 Sodium:solute symporter family EA743_001130 PF02028 BCCT, betaine/carnitine/choline family transporter EA743_001140 PF00990 Diguanylate cyclase, GGDEF domain EA743_001140 PF17158 Membrane-associated sensor, integral membrane domain EA743_001145 PF17755 UvrA DNA-binding domain EA743_001145 PF17760 UvrA interaction domain EA743_001150 PF16925 Tetracyclin repressor-like, C-terminal domain EA743_001150 PF00440 Bacterial regulatory proteins, tetR family EA743_001155 PF00107 Zinc-binding dehydrogenase EA743_001155 PF08240 Alcohol dehydrogenase GroES-like domain EA743_001165 PF06942 GlpM protein EA743_001170 PF08543 Phosphomethylpyrimidine kinase EA743_001170 PF03070 TENA/THI-4/PQQC family EA743_001170 PF02581 Thiamine monophosphate synthase EA743_001180 PF07690 Major Facilitator Superfamily EA743_001185 PF00436 Single-strand binding protein family EA743_001195 PF03591 AzlC protein EA743_001205 PF00324 Amino acid permease EA743_001210 PF00155 Aminotransferase class I and II EA743_001210 PF00392 Bacterial regulatory proteins, gntR family EA743_001215 PF00202 Aminotransferase class-III EA743_001220 PF00171 Aldehyde dehydrogenase family EA743_001225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_001230 PF00857 Isochorismatase family EA743_001235 PF05726 Pirin C-terminal cupin domain EA743_001235 PF02678 Pirin EA743_001240 PF01593 Flavin containing amine oxidoreductase EA743_001260 PF07690 Major Facilitator Superfamily EA743_001265 PF03466 LysR substrate binding domain EA743_001265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_001285 PF00248 Aldo/keto reductase family EA743_001290 PF02311 AraC-like ligand binding domain EA743_001290 PF12833 Helix-turn-helix domain EA743_001320 PF01638 HxlR-like helix-turn-helix EA743_001330 PF02525 Flavodoxin-like fold EA743_001345 PF02705 K+ potassium transporter EA743_001370 PF00230 Major intrinsic protein EA743_001385 PF00977 Histidine biosynthesis protein EA743_001390 PF01636 Phosphotransferase enzyme family EA743_001415 PF00005 ABC transporter EA743_001415 PF00664 ABC transporter transmembrane region EA743_001420 PF00977 Histidine biosynthesis protein EA743_001435 PF00117 Glutamine amidotransferase class-I EA743_001440 PF00475 Imidazoleglycerol-phosphate dehydratase EA743_001460 PF00583 Acetyltransferase (GNAT) family EA743_001465 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EA743_001465 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EA743_001475 PF00512 His Kinase A (phospho-acceptor) domain EA743_001475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_001475 PF00672 HAMP domain EA743_001480 PF00072 Response regulator receiver domain EA743_001480 PF00486 Transcriptional regulatory protein, C terminal EA743_001485 PF17674 HHH domain EA743_001485 PF16921 Tex protein YqgF-like domain EA743_001485 PF00575 S1 RNA binding domain EA743_001485 PF09371 Tex-like protein N-terminal domain EA743_001490 PF00916 Sulfate permease family EA743_001490 PF01740 STAS domain EA743_001495 PF00106 short chain dehydrogenase EA743_001500 PF01053 Cys/Met metabolism PLP-dependent enzyme EA743_001505 PF00005 ABC transporter EA743_001505 PF12848 ABC transporter EA743_001530 PF00529 HlyD membrane-fusion protein of T1SS EA743_001530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_001535 PF00873 AcrB/AcrD/AcrF family EA743_001540 PF01545 Cation efflux family EA743_001570 PF00324 Amino acid permease EA743_001585 PF00749 tRNA synthetases class I (E and Q), catalytic domain EA743_001600 PF01795 MraW methylase family EA743_001610 PF00905 Penicillin binding protein transpeptidase domain EA743_001610 PF03717 Penicillin-binding Protein dimerisation domain EA743_001615 PF02875 Mur ligase family, glutamate ligase domain EA743_001615 PF01225 Mur ligase family, catalytic domain EA743_001615 PF08245 Mur ligase middle domain EA743_001620 PF01225 Mur ligase family, catalytic domain EA743_001620 PF02875 Mur ligase family, glutamate ligase domain EA743_001620 PF08245 Mur ligase middle domain EA743_001625 PF00953 Glycosyl transferase family 4 EA743_001635 PF13847 Methyltransferase domain EA743_001640 PF00912 Transglycosylase EA743_001640 PF00905 Penicillin binding protein transpeptidase domain EA743_001640 PF17092 Penicillin-binding protein OB-like domain EA743_001665 PF03958 Bacterial type II/III secretion system short domain EA743_001665 PF07660 Secretin and TonB N terminus short domain EA743_001665 PF11741 AMIN domain EA743_001665 PF00263 Bacterial type II and III secretion system protein EA743_001670 PF01202 Shikimate kinase EA743_001675 PF01761 3-dehydroquinate synthase EA743_001685 PF01493 GXGXG motif EA743_001685 PF01645 Conserved region in glutamate synthase EA743_001685 PF00310 Glutamine amidotransferases class-II EA743_001685 PF04898 Glutamate synthase central domain EA743_001690 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_001690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EA743_001700 PF04011 LemA family EA743_001705 PF04536 TPM domain EA743_001715 PF07963 Prokaryotic N-terminal methylation motif EA743_001715 PF00114 Pilin (bacterial filament) EA743_001725 PF15864 Protein glycosylation ligase EA743_001725 PF04932 O-Antigen ligase EA743_001725 PF11846 Virulence factor membrane-bound polymerase, C-terminal EA743_001730 PF00210 Ferritin-like domain EA743_001735 PF04324 BFD-like [2Fe-2S] binding domain EA743_001740 PF01042 Endoribonuclease L-PSP EA743_001745 PF04607 Region found in RelA / SpoT proteins EA743_001745 PF02824 TGS domain EA743_001745 PF13291 ACT domain EA743_001755 PF01192 RNA polymerase Rpb6 EA743_001760 PF00625 Guanylate kinase EA743_001765 PF02401 LytB protein EA743_001805 PF00886 Ribosomal protein S16 EA743_001810 PF01782 RimM N-terminal domain EA743_001810 PF05239 PRC-barrel domain EA743_001815 PF01746 tRNA (Guanine-1)-methyltransferase EA743_001820 PF01245 Ribosomal protein L19 EA743_001825 PF00561 alpha/beta hydrolase fold EA743_001830 PF03280 Proteobacterial lipase chaperone protein EA743_001835 PF16198 tRNA pseudouridylate synthase B C-terminal domain EA743_001835 PF01509 TruB family pseudouridylate synthase (N terminal domain) EA743_001835 PF09157 Pseudouridine synthase II TruB, C-terminal EA743_001840 PF01925 Sulfite exporter TauE/SafE EA743_001850 PF00892 EamA-like transporter family EA743_001855 PF00892 EamA-like transporter family EA743_001860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EA743_001860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EA743_001865 PF01565 FAD binding domain EA743_001865 PF02913 FAD linked oxidases, C-terminal domain EA743_001880 PF03992 Antibiotic biosynthesis monooxygenase EA743_001885 PF02525 Flavodoxin-like fold EA743_001895 PF07690 Major Facilitator Superfamily EA743_001900 PF12805 FUSC-like inner membrane protein yccS EA743_001905 PF00080 Copper/zinc superoxide dismutase (SODC) EA743_001910 PF01594 AI-2E family transporter EA743_001915 PF13614 AAA domain EA743_001935 PF08241 Methyltransferase domain EA743_001945 PF00324 Amino acid permease EA743_001955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EA743_001955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EA743_001960 PF00202 Aminotransferase class-III EA743_001965 PF04958 Arginine N-succinyltransferase beta subunit EA743_001970 PF00171 Aldehyde dehydrogenase family EA743_001975 PF04996 Succinylarginine dihydrolase EA743_001980 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EA743_002010 PF03466 LysR substrate binding domain EA743_002010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_002015 PF00892 EamA-like transporter family EA743_002035 PF02092 Glycyl-tRNA synthetase beta subunit EA743_002035 PF05746 DALR anticodon binding domain EA743_002040 PF02091 Glycyl-tRNA synthetase alpha subunit EA743_002045 PF07690 Major Facilitator Superfamily EA743_002060 PF00571 CBS domain EA743_002065 PF04024 PspC domain EA743_002075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_002075 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_002075 PF12806 Acetyl-CoA dehydrogenase C-terminal like EA743_002075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_002085 PF08501 Shikimate dehydrogenase substrate binding domain EA743_002085 PF01488 Shikimate / quinate 5-dehydrogenase EA743_002085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EA743_002090 PF01218 Coproporphyrinogen III oxidase EA743_002095 PF00925 GTP cyclohydrolase II EA743_002100 PF02779 Transketolase, pyrimidine binding domain EA743_002100 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EA743_002100 PF02780 Transketolase, C-terminal domain EA743_002105 PF00459 Inositol monophosphatase family EA743_002110 PF03880 DbpA RNA binding domain EA743_002110 PF00271 Helicase conserved C-terminal domain EA743_002110 PF12343 Cold shock protein DEAD box A EA743_002110 PF00270 DEAD/DEAH box helicase EA743_002120 PF00005 ABC transporter EA743_002125 PF02405 Permease MlaE EA743_002135 PF05494 MlaC protein EA743_002145 PF01544 CorA-like Mg2+ transporter protein EA743_002150 PF03641 Possible lysine decarboxylase EA743_002155 PF00293 NUDIX domain EA743_002160 PF00156 Phosphoribosyl transferase domain EA743_002165 PF00271 Helicase conserved C-terminal domain EA743_002165 PF17191 RecG wedge domain EA743_002165 PF00270 DEAD/DEAH box helicase EA743_002180 PF01553 Acyltransferase EA743_002190 PF00375 Sodium:dicarboxylate symporter family EA743_002200 PF01926 50S ribosome-binding GTPase EA743_002205 PF02082 Transcriptional regulator EA743_002210 PF00970 Oxidoreductase FAD-binding domain EA743_002210 PF00042 Globin EA743_002210 PF00175 Oxidoreductase NAD-binding domain EA743_002220 PF05872 Bacterial protein of unknown function (DUF853) EA743_002225 PF01053 Cys/Met metabolism PLP-dependent enzyme EA743_002230 PF00117 Glutamine amidotransferase class-I EA743_002235 PF00338 Ribosomal protein S10p/S20e EA743_002240 PF00297 Ribosomal protein L3 EA743_002245 PF00573 Ribosomal protein L4/L1 family EA743_002250 PF00276 Ribosomal protein L23 EA743_002255 PF00181 Ribosomal Proteins L2, RNA binding domain EA743_002255 PF03947 Ribosomal Proteins L2, C-terminal domain EA743_002260 PF00203 Ribosomal protein S19 EA743_002265 PF00237 Ribosomal protein L22p/L17e EA743_002270 PF07650 KH domain EA743_002270 PF00189 Ribosomal protein S3, C-terminal domain EA743_002275 PF00252 Ribosomal protein L16p/L10e EA743_002280 PF00831 Ribosomal L29 protein EA743_002285 PF00366 Ribosomal protein S17 EA743_002290 PF00238 Ribosomal protein L14p/L23e EA743_002295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EA743_002295 PF00467 KOW motif EA743_002300 PF00673 ribosomal L5P family C-terminus EA743_002300 PF00281 Ribosomal protein L5 EA743_002305 PF00253 Ribosomal protein S14p/S29e EA743_002310 PF00410 Ribosomal protein S8 EA743_002315 PF00347 Ribosomal protein L6 EA743_002320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EA743_002325 PF03719 Ribosomal protein S5, C-terminal domain EA743_002325 PF00333 Ribosomal protein S5, N-terminal domain EA743_002330 PF00327 Ribosomal protein L30p/L7e EA743_002335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EA743_002340 PF00344 SecY translocase EA743_002345 PF00444 Ribosomal protein L36 EA743_002350 PF00416 Ribosomal protein S13/S18 EA743_002355 PF00411 Ribosomal protein S11 EA743_002360 PF00163 Ribosomal protein S4/S9 N-terminal domain EA743_002360 PF01479 S4 domain EA743_002365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EA743_002365 PF01000 RNA polymerase Rpb3/RpoA insert domain EA743_002365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EA743_002370 PF01196 Ribosomal protein L17 EA743_002375 PF00743 Flavin-binding monooxygenase-like EA743_002380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_002380 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_002380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_002385 PF03937 Flavinator of succinate dehydrogenase EA743_002415 PF09526 Probable metal-binding protein (DUF2387) EA743_002420 PF01432 Peptidase family M3 EA743_002425 PF00575 S1 RNA binding domain EA743_002425 PF08461 Ribonuclease R winged-helix domain EA743_002425 PF17876 Cold shock domain EA743_002425 PF08206 Ribonuclease B OB domain EA743_002425 PF00773 RNB domain EA743_002475 PF01557 Fumarylacetoacetate (FAA) hydrolase family EA743_002480 PF12833 Helix-turn-helix domain EA743_002485 PF00892 EamA-like transporter family EA743_002490 PF03631 Virulence factor BrkB EA743_002495 PF03358 NADPH-dependent FMN reductase EA743_002520 PF02130 Uncharacterized protein family UPF0054 EA743_002525 PF02562 PhoH-like protein EA743_002530 PF04055 Radical SAM superfamily EA743_002530 PF01938 TRAM domain EA743_002530 PF00919 Uncharacterized protein family UPF0004 EA743_002535 PF01464 Transglycosylase SLT domain EA743_002535 PF10145 Phage-related minor tail protein EA743_002535 PF01551 Peptidase family M23 EA743_002545 PF00056 lactate/malate dehydrogenase, NAD binding domain EA743_002545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EA743_002565 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EA743_002570 PF01066 CDP-alcohol phosphatidyltransferase EA743_002615 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_002615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_002615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_002620 PF17932 Tetracyclin repressor-like, C-terminal domain EA743_002620 PF00440 Bacterial regulatory proteins, tetR family EA743_002635 PF01039 Carboxyl transferase domain EA743_002640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_002640 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_002640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_002650 PF02785 Biotin carboxylase C-terminal domain EA743_002650 PF00289 Biotin carboxylase, N-terminal domain EA743_002650 PF00364 Biotin-requiring enzyme EA743_002650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA743_002660 PF04386 Stringent starvation protein B EA743_002665 PF13417 Glutathione S-transferase, N-terminal domain EA743_002665 PF00043 Glutathione S-transferase, C-terminal domain EA743_002670 PF00380 Ribosomal protein S9/S16 EA743_002675 PF00572 Ribosomal protein L13 EA743_002680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EA743_002685 PF00398 Ribosomal RNA adenine dimethylase EA743_002690 PF00149 Calcineurin-like phosphoesterase EA743_002710 PF13167 GTP-binding GTPase N-terminal EA743_002710 PF16360 GTP-binding GTPase Middle Region EA743_002710 PF01926 50S ribosome-binding GTPase EA743_002720 PF13091 PLD-like domain EA743_002725 PF00149 Calcineurin-like phosphoesterase EA743_002725 PF10518 TAT (twin-arginine translocation) pathway signal sequence EA743_002730 PF00691 OmpA family EA743_002730 PF01389 OmpA-like transmembrane domain EA743_002735 PF00990 Diguanylate cyclase, GGDEF domain EA743_002735 PF17152 Periplasmic sensor domain EA743_002770 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_002770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EA743_002780 PF04273 Putative phosphatase (DUF442) EA743_002780 PF00753 Metallo-beta-lactamase superfamily EA743_002785 PF00561 alpha/beta hydrolase fold EA743_002790 PF00085 Thioredoxin EA743_002795 PF03061 Thioesterase superfamily EA743_002805 PF04461 Protein of unknown function (DUF520) EA743_002815 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EA743_002815 PF01266 FAD dependent oxidoreductase EA743_002825 PF03795 YCII-related domain EA743_002830 PF04279 Intracellular septation protein A EA743_002835 PF02811 PHP domain EA743_002840 PF01062 Bestrophin, RFP-TM, chloride channel EA743_002845 PF04002 RadC-like JAB domain EA743_002850 PF02441 Flavoprotein EA743_002850 PF04127 DNA / pantothenate metabolism flavoprotein EA743_002855 PF07549 SecD/SecF GG Motif EA743_002855 PF02355 Protein export membrane protein EA743_002860 PF13721 SecD export protein N-terminal TM region EA743_002860 PF02355 Protein export membrane protein EA743_002860 PF07549 SecD/SecF GG Motif EA743_002865 PF02699 Preprotein translocase subunit EA743_002870 PF01702 Queuine tRNA-ribosyltransferase EA743_002885 PF02547 Queuosine biosynthesis protein EA743_002895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_002895 PF00512 His Kinase A (phospho-acceptor) domain EA743_002895 PF07689 KaiB domain EA743_002900 PF03710 Glutamate-ammonia ligase adenylyltransferase EA743_002900 PF08335 GlnD PII-uridylyltransferase EA743_002905 PF01063 Amino-transferase class IV EA743_002920 PF01522 Polysaccharide deacetylase EA743_002925 PF00535 Glycosyl transferase family 2 EA743_002930 PF13439 Glycosyltransferase Family 4 EA743_002930 PF00534 Glycosyl transferases group 1 EA743_002955 PF11380 Stealth protein CR2, conserved region 2 EA743_002955 PF17101 Stealth protein CR1, conserved region 1 EA743_002955 PF17102 Stealth protein CR3, conserved region 3 EA743_002960 PF02938 GAD domain EA743_002960 PF01336 OB-fold nucleic acid binding domain EA743_002960 PF00152 tRNA synthetases class II (D, K and N) EA743_002970 PF00593 TonB dependent receptor EA743_002970 PF07715 TonB-dependent Receptor Plug Domain EA743_002990 PF06146 Phosphate-starvation-inducible E EA743_002995 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_002995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_002995 PF12806 Acetyl-CoA dehydrogenase C-terminal like EA743_002995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_003000 PF12806 Acetyl-CoA dehydrogenase C-terminal like EA743_003000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_003000 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_003000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_003010 PF00672 HAMP domain EA743_003010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_003010 PF00512 His Kinase A (phospho-acceptor) domain EA743_003015 PF00072 Response regulator receiver domain EA743_003015 PF00486 Transcriptional regulatory protein, C terminal EA743_003020 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EA743_003040 PF01923 Cobalamin adenosyltransferase EA743_003045 PF07715 TonB-dependent Receptor Plug Domain EA743_003045 PF00593 TonB dependent receptor EA743_003050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EA743_003055 PF00291 Pyridoxal-phosphate dependent enzyme EA743_003080 PF00290 Tryptophan synthase alpha chain EA743_003085 PF01039 Carboxyl transferase domain EA743_003090 PF02875 Mur ligase family, glutamate ligase domain EA743_003090 PF08245 Mur ligase middle domain EA743_003105 PF00753 Metallo-beta-lactamase superfamily EA743_003110 PF00578 AhpC/TSA family EA743_003110 PF10417 C-terminal domain of 1-Cys peroxiredoxin EA743_003115 PF01043 SecA preprotein cross-linking domain EA743_003115 PF07516 SecA Wing and Scaffold domain EA743_003115 PF07517 SecA DEAD-like domain EA743_003115 PF02810 SEC-C motif EA743_003125 PF00083 Sugar (and other) transporter EA743_003125 PF07690 Major Facilitator Superfamily EA743_003130 PF03006 Haemolysin-III related EA743_003155 PF00378 Enoyl-CoA hydratase/isomerase EA743_003155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EA743_003155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EA743_003160 PF02803 Thiolase, C-terminal domain EA743_003160 PF00108 Thiolase, N-terminal domain EA743_003165 PF12833 Helix-turn-helix domain EA743_003165 PF02311 AraC-like ligand binding domain EA743_003170 PF02515 CoA-transferase family III EA743_003175 PF04966 Carbohydrate-selective porin, OprB family EA743_003180 PF01011 PQQ enzyme repeat EA743_003185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EA743_003185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EA743_003195 PF00893 Small Multidrug Resistance protein EA743_003205 PF02803 Thiolase, C-terminal domain EA743_003205 PF00108 Thiolase, N-terminal domain EA743_003215 PF00691 OmpA family EA743_003215 PF13505 Outer membrane protein beta-barrel domain EA743_003225 PF01139 tRNA-splicing ligase RtcB EA743_003230 PF00324 Amino acid permease EA743_003235 PF05175 Methyltransferase small domain EA743_003235 PF08468 Methyltransferase small domain N-terminal EA743_003240 PF00860 Permease family EA743_003250 PF01741 Large-conductance mechanosensitive channel, MscL EA743_003265 PF06827 Zinc finger found in FPG and IleRS EA743_003265 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EA743_003265 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EA743_003270 PF02245 Methylpurine-DNA glycosylase (MPG) EA743_003275 PF00593 TonB dependent receptor EA743_003275 PF07715 TonB-dependent Receptor Plug Domain EA743_003280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_003285 PF03547 Membrane transport protein EA743_003295 PF10411 Disulfide bond isomerase protein N-terminus EA743_003295 PF13098 Thioredoxin-like domain EA743_003300 PF01571 Aminomethyltransferase folate-binding domain EA743_003310 PF04343 Protein of unknown function, DUF488 EA743_003315 PF08274 PhnA Zinc-Ribbon EA743_003315 PF03831 PhnA domain EA743_003320 PF07411 Domain of unknown function (DUF1508) EA743_003325 PF04073 Aminoacyl-tRNA editing domain EA743_003325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EA743_003325 PF03129 Anticodon binding domain EA743_003330 PF00873 AcrB/AcrD/AcrF family EA743_003345 PF00072 Response regulator receiver domain EA743_003350 PF00072 Response regulator receiver domain EA743_003355 PF01584 CheW-like domain EA743_003360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EA743_003360 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EA743_003365 PF00072 Response regulator receiver domain EA743_003365 PF01627 Hpt domain EA743_003365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_003365 PF01584 CheW-like domain EA743_003375 PF01546 Peptidase family M20/M25/M40 EA743_003375 PF07687 Peptidase dimerisation domain EA743_003380 PF08085 Entericidin EcnA/B family EA743_003390 PF04304 Protein of unknown function (DUF454) EA743_003395 PF03734 L,D-transpeptidase catalytic domain EA743_003395 PF17969 L,D-transpeptidase C-terminal domain EA743_003435 PF00175 Oxidoreductase NAD-binding domain EA743_003435 PF00258 Flavodoxin EA743_003435 PF00667 FAD binding domain EA743_003445 PF12805 FUSC-like inner membrane protein yccS EA743_003450 PF07690 Major Facilitator Superfamily EA743_003455 PF00881 Nitroreductase family EA743_003470 PF01235 Sodium:alanine symporter family EA743_003475 PF01734 Patatin-like phospholipase EA743_003480 PF00291 Pyridoxal-phosphate dependent enzyme EA743_003480 PF13291 ACT domain EA743_003485 PF05992 SbmA/BacA-like family EA743_003510 PF02934 GatB/GatE catalytic domain EA743_003510 PF02637 GatB domain EA743_003515 PF01425 Amidase EA743_003520 PF02686 Glu-tRNAGln amidotransferase C subunit EA743_003530 PF04085 rod shape-determining protein MreC EA743_003535 PF04093 rod shape-determining protein MreD EA743_003540 PF02545 Maf-like protein EA743_003545 PF10150 Ribonuclease E/G family EA743_003545 PF00575 S1 RNA binding domain EA743_003555 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain EA743_003555 PF06974 Protein of unknown function (DUF1298) EA743_003560 PF01507 Phosphoadenosine phosphosulfate reductase family EA743_003575 PF02525 Flavodoxin-like fold EA743_003595 PF02673 Bacitracin resistance protein BacA EA743_003600 PF12833 Helix-turn-helix domain EA743_003600 PF06719 AraC-type transcriptional regulator N-terminus EA743_003605 PF08990 Erythronolide synthase docking EA743_003605 PF08240 Alcohol dehydrogenase GroES-like domain EA743_003605 PF14765 Polyketide synthase dehydratase EA743_003605 PF02801 Beta-ketoacyl synthase, C-terminal domain EA743_003605 PF08659 KR domain EA743_003605 PF00550 Phosphopantetheine attachment site EA743_003605 PF00698 Acyl transferase domain EA743_003605 PF00109 Beta-ketoacyl synthase, N-terminal domain EA743_003605 PF16197 Ketoacyl-synthetase C-terminal extension EA743_003605 PF09277 Erythronolide synthase, docking EA743_003610 PF01965 DJ-1/PfpI family EA743_003650 PF00324 Amino acid permease EA743_003655 PF04303 PrpF protein EA743_003660 PF00348 Polyprenyl synthetase EA743_003665 PF04237 YjbR EA743_003670 PF01145 SPFH domain / Band 7 family EA743_003680 PF01734 Patatin-like phospholipase EA743_003705 PF13817 IS66 C-terminal element EA743_003705 PF03050 Transposase IS66 family EA743_003705 PF13007 Transposase C of IS166 homeodomain EA743_003705 PF13005 zinc-finger binding domain of transposase IS66 EA743_003720 PF13007 Transposase C of IS166 homeodomain EA743_003720 PF13005 zinc-finger binding domain of transposase IS66 EA743_003720 PF03050 Transposase IS66 family EA743_003720 PF13817 IS66 C-terminal element EA743_003740 PF00486 Transcriptional regulatory protein, C terminal EA743_003740 PF00072 Response regulator receiver domain EA743_003745 PF00512 His Kinase A (phospho-acceptor) domain EA743_003745 PF08521 Two-component sensor kinase N-terminal EA743_003745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_003755 PF00909 Ammonium Transporter Family EA743_003765 PF03466 LysR substrate binding domain EA743_003765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_003780 PF13649 Methyltransferase domain EA743_003785 PF10458 Valyl tRNA synthetase tRNA binding arm EA743_003785 PF08264 Anticodon-binding domain of tRNA EA743_003785 PF00133 tRNA synthetases class I (I, L, M and V) EA743_003805 PF01906 Putative heavy-metal-binding EA743_003810 PF01906 Putative heavy-metal-binding EA743_003815 PF02321 Outer membrane efflux protein EA743_003820 PF00873 AcrB/AcrD/AcrF family EA743_003825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_003825 PF00529 HlyD membrane-fusion protein of T1SS EA743_003830 PF01569 PAP2 superfamily EA743_003840 PF00348 Polyprenyl synthetase EA743_003850 PF00829 Ribosomal prokaryotic L21 protein EA743_003855 PF01016 Ribosomal L27 protein EA743_003860 PF03548 Outer membrane lipoprotein carrier protein LolA EA743_003870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EA743_003870 PF02403 Seryl-tRNA synthetase N-terminal domain EA743_003875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EA743_003875 PF10414 Sirohaem synthase dimerisation region EA743_003875 PF14824 Sirohaem biosynthesis protein central EA743_003880 PF00588 SpoU rRNA Methylase family EA743_003885 PF01638 HxlR-like helix-turn-helix EA743_003890 PF03358 NADPH-dependent FMN reductase EA743_003895 PF13520 Amino acid permease EA743_003900 PF00465 Iron-containing alcohol dehydrogenase EA743_003910 PF03099 Biotin/lipoate A/B protein ligase family EA743_003915 PF04359 Protein of unknown function (DUF493) EA743_003920 PF04542 Sigma-70 region 2 EA743_003920 PF04546 Sigma-70, non-essential region EA743_003920 PF04545 Sigma-70, region 4 EA743_003920 PF04539 Sigma-70 region 3 EA743_003920 PF03979 Sigma-70 factor, region 1.1 EA743_003920 PF00140 Sigma-70 factor, region 1.2 EA743_003950 PF00285 Citrate synthase, C-terminal domain EA743_003955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EA743_003960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EA743_003965 PF00890 FAD binding domain EA743_003965 PF02910 Fumarate reductase flavoprotein C-term EA743_003970 PF13085 2Fe-2S iron-sulfur cluster binding domain EA743_003985 PF02779 Transketolase, pyrimidine binding domain EA743_003985 PF16078 2-oxoglutarate dehydrogenase N-terminus EA743_003985 PF00676 Dehydrogenase E1 component EA743_003985 PF16870 2-oxoglutarate dehydrogenase C-terminal EA743_003990 PF02817 e3 binding domain EA743_003990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EA743_003990 PF00364 Biotin-requiring enzyme EA743_003995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EA743_003995 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_004000 PF00549 CoA-ligase EA743_004000 PF08442 ATP-grasp domain EA743_004005 PF00549 CoA-ligase EA743_004005 PF02629 CoA binding domain EA743_004010 PF00579 tRNA synthetases class I (W and Y) EA743_004015 PF05661 Protein of unknown function (DUF808) EA743_004020 PF04228 Putative neutral zinc metallopeptidase EA743_004025 PF00999 Sodium/hydrogen exchanger family EA743_004040 PF09587 Bacterial capsule synthesis protein PGA_cap EA743_004050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EA743_004055 PF00582 Universal stress protein family EA743_004060 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_004065 PF01272 Transcription elongation factor, GreA/GreB, C-term EA743_004065 PF03449 Transcription elongation factor, N-terminal EA743_004070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA743_004070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EA743_004070 PF02142 MGS-like domain EA743_004075 PF00117 Glutamine amidotransferase class-I EA743_004075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EA743_004090 PF01985 CRS1 / YhbY (CRM) domain EA743_004095 PF01728 FtsJ-like methyltransferase EA743_004100 PF01434 Peptidase family M41 EA743_004100 PF06480 FtsH Extracellular EA743_004100 PF00004 ATPase family associated with various cellular activities (AAA) EA743_004100 PF17862 AAA+ lid domain EA743_004105 PF00809 Pterin binding enzyme EA743_004125 PF09423 PhoD-like phosphatase EA743_004125 PF16655 PhoD-like phosphatase, N-terminal domain EA743_004140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EA743_004140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EA743_004155 PF00083 Sugar (and other) transporter EA743_004160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EA743_004160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EA743_004165 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EA743_004165 PF01266 FAD dependent oxidoreductase EA743_004170 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain EA743_004170 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain EA743_004175 PF00781 Diacylglycerol kinase catalytic domain EA743_004180 PF00149 Calcineurin-like phosphoesterase EA743_004190 PF00166 Chaperonin 10 Kd subunit EA743_004195 PF00118 TCP-1/cpn60 chaperonin family EA743_004200 PF01219 Prokaryotic diacylglycerol kinase EA743_004205 PF00753 Metallo-beta-lactamase superfamily EA743_004210 PF03009 Glycerophosphoryl diester phosphodiesterase family EA743_004215 PF00873 AcrB/AcrD/AcrF family EA743_004225 PF01435 Peptidase family M48 EA743_004230 PF01464 Transglycosylase SLT domain EA743_004240 PF01171 PP-loop family EA743_004250 PF00497 Bacterial extracellular solute-binding proteins, family 3 EA743_004250 PF01464 Transglycosylase SLT domain EA743_004255 PF01272 Transcription elongation factor, GreA/GreB, C-term EA743_004255 PF03449 Transcription elongation factor, N-terminal EA743_004280 PF09857 Putative toxin of bacterial toxin-antitoxin pair EA743_004305 PF00881 Nitroreductase family EA743_004320 PF02595 Glycerate kinase family EA743_004325 PF00384 Molybdopterin oxidoreductase EA743_004330 PF02634 FdhD/NarQ family EA743_004335 PF06803 Protein of unknown function (DUF1232) EA743_004340 PF11890 Domain of unknown function (DUF3410) EA743_004340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EA743_004340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EA743_004345 PF00152 tRNA synthetases class II (D, K and N) EA743_004355 PF18073 Rubredoxin metal binding domain EA743_004360 PF00324 Amino acid permease EA743_004370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EA743_004370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EA743_004375 PF01678 Diaminopimelate epimerase EA743_004380 PF01810 LysE type translocator EA743_004385 PF00589 Phage integrase family EA743_004385 PF02899 Phage integrase, N-terminal SAM-like domain EA743_004390 PF01012 Electron transfer flavoprotein domain EA743_004395 PF00766 Electron transfer flavoprotein FAD-binding domain EA743_004395 PF01012 Electron transfer flavoprotein domain EA743_004400 PF00521 DNA gyrase/topoisomerase IV, subunit A EA743_004400 PF03989 DNA gyrase C-terminal domain, beta-propeller EA743_004415 PF00535 Glycosyl transferase family 2 EA743_004435 PF13533 Biotin-lipoyl like EA743_004445 PF00266 Aminotransferase class-V EA743_004455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EA743_004465 PF02687 FtsX-like permease family EA743_004465 PF12704 MacB-like periplasmic core domain EA743_004470 PF00005 ABC transporter EA743_004475 PF03772 Competence protein EA743_004475 PF00753 Metallo-beta-lactamase superfamily EA743_004475 PF13567 Domain of unknown function (DUF4131) EA743_004485 PF06965 Na+/H+ antiporter 1 EA743_004485 PF01343 Peptidase family S49 EA743_004490 PF12697 Alpha/beta hydrolase family EA743_004495 PF00551 Formyl transferase EA743_004500 PF00586 AIR synthase related protein, N-terminal domain EA743_004500 PF02769 AIR synthase related protein, C-terminal domain EA743_004505 PF01594 AI-2E family transporter EA743_004510 PF00308 Bacterial dnaA protein EA743_004510 PF11638 DnaA N-terminal domain EA743_004510 PF08299 Bacterial dnaA protein helix-turn-helix EA743_004525 PF13005 zinc-finger binding domain of transposase IS66 EA743_004525 PF13007 Transposase C of IS166 homeodomain EA743_004525 PF13817 IS66 C-terminal element EA743_004525 PF03050 Transposase IS66 family EA743_004545 PF03050 Transposase IS66 family EA743_004545 PF13007 Transposase C of IS166 homeodomain EA743_004545 PF13005 zinc-finger binding domain of transposase IS66 EA743_004545 PF13817 IS66 C-terminal element EA743_004580 PF08032 RNA 2'-O ribose methyltransferase substrate binding EA743_004580 PF00588 SpoU rRNA Methylase family EA743_004585 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EA743_004595 PF00691 OmpA family EA743_004600 PF07676 WD40-like Beta Propeller Repeat EA743_004600 PF04052 TolB amino-terminal domain EA743_004610 PF02472 Biopolymer transport protein ExbD/TolR EA743_004615 PF01618 MotA/TolQ/ExbB proton channel family EA743_004620 PF03061 Thioesterase superfamily EA743_004625 PF07687 Peptidase dimerisation domain EA743_004625 PF01546 Peptidase family M20/M25/M40 EA743_004630 PF05491 RuvB C-terminal winged helix domain EA743_004630 PF05496 Holliday junction DNA helicase RuvB P-loop domain EA743_004630 PF17864 RuvB AAA lid domain EA743_004635 PF01330 RuvA N terminal domain EA743_004635 PF07499 RuvA, C-terminal domain EA743_004640 PF01966 HD domain EA743_004645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EA743_004645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EA743_004645 PF02769 AIR synthase related protein, C-terminal domain EA743_004650 PF07690 Major Facilitator Superfamily EA743_004655 PF01784 NIF3 (NGG1p interacting factor 3) EA743_004660 PF00378 Enoyl-CoA hydratase/isomerase EA743_004665 PF01467 Cytidylyltransferase-like EA743_004665 PF00293 NUDIX domain EA743_004675 PF00578 AhpC/TSA family EA743_004690 PF06508 Queuosine biosynthesis protein QueC EA743_004700 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_004700 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EA743_004700 PF14602 Hexapeptide repeat of succinyl-transferase EA743_004710 PF03466 LysR substrate binding domain EA743_004710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_004715 PF00005 ABC transporter EA743_004715 PF12857 TOBE-like domain EA743_004720 PF00528 Binding-protein-dependent transport system inner membrane component EA743_004725 PF00528 Binding-protein-dependent transport system inner membrane component EA743_004740 PF01063 Amino-transferase class IV EA743_004745 PF02618 YceG-like family EA743_004750 PF02223 Thymidylate kinase EA743_004760 PF00890 FAD binding domain EA743_004760 PF02910 Fumarate reductase flavoprotein C-term EA743_004765 PF13180 PDZ domain EA743_004775 PF00679 Elongation factor G C-terminus EA743_004775 PF00009 Elongation factor Tu GTP binding domain EA743_004775 PF03144 Elongation factor Tu domain 2 EA743_004775 PF06421 GTP-binding protein LepA C-terminus EA743_004780 PF10502 Signal peptidase, peptidase S26 EA743_004790 PF14622 Ribonuclease-III-like EA743_004790 PF00035 Double-stranded RNA binding motif EA743_004795 PF01926 50S ribosome-binding GTPase EA743_004795 PF07650 KH domain EA743_004805 PF02565 Recombination protein O C terminal EA743_004805 PF11967 Recombination protein O N terminal EA743_004810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EA743_004815 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EA743_004820 PF00106 short chain dehydrogenase EA743_004850 PF00012 Hsp70 protein EA743_004870 PF17151 Periplasmic sensor domain EA743_004870 PF00990 Diguanylate cyclase, GGDEF domain EA743_004880 PF00271 Helicase conserved C-terminal domain EA743_004880 PF02151 UvrB/uvrC motif EA743_004880 PF12344 Ultra-violet resistance protein B EA743_004880 PF17757 UvrB interaction domain EA743_004880 PF04851 Type III restriction enzyme, res subunit EA743_004890 PF00892 EamA-like transporter family EA743_004895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EA743_004895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EA743_004910 PF01926 50S ribosome-binding GTPase EA743_004910 PF01018 GTP1/OBG EA743_004915 PF00696 Amino acid kinase family EA743_004915 PF01472 PUA domain EA743_004925 PF07759 Protein of unknown function (DUF1615) EA743_004930 PF01207 Dihydrouridine synthase (Dus) EA743_004935 PF03060 Nitronate monooxygenase EA743_004950 PF02350 UDP-N-acetylglucosamine 2-epimerase EA743_004980 PF03441 FAD binding domain of DNA photolyase EA743_004980 PF00875 DNA photolyase EA743_004985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA743_004990 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_004995 PF07943 Penicillin-binding protein 5, C-terminal domain EA743_004995 PF00768 D-alanyl-D-alanine carboxypeptidase EA743_005005 PF03971 Monomeric isocitrate dehydrogenase EA743_005010 PF00849 RNA pseudouridylate synthase EA743_005015 PF00180 Isocitrate/isopropylmalate dehydrogenase EA743_005035 PF06779 Uncharacterised MFS-type transporter YbfB EA743_005040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_005040 PF03466 LysR substrate binding domain EA743_005050 PF02567 Phenazine biosynthesis-like protein EA743_005055 PF00675 Insulinase (Peptidase family M16) EA743_005055 PF05193 Peptidase M16 inactive domain EA743_005080 PF03050 Transposase IS66 family EA743_005080 PF13007 Transposase C of IS166 homeodomain EA743_005080 PF13005 zinc-finger binding domain of transposase IS66 EA743_005080 PF13817 IS66 C-terminal element EA743_005100 PF02581 Thiamine monophosphate synthase EA743_005105 PF00202 Aminotransferase class-III EA743_005115 PF00849 RNA pseudouridylate synthase EA743_005120 PF12137 RNA polymerase recycling family C-terminal EA743_005120 PF18337 RapA N-terminal Tudor like domain EA743_005120 PF18339 RapA N-terminal Tudor like domain 1 EA743_005120 PF00176 SNF2 family N-terminal domain EA743_005120 PF00271 Helicase conserved C-terminal domain EA743_005130 PF00440 Bacterial regulatory proteins, tetR family EA743_005135 PF00970 Oxidoreductase FAD-binding domain EA743_005135 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_005135 PF00175 Oxidoreductase NAD-binding domain EA743_005140 PF00487 Fatty acid desaturase EA743_005145 PF02525 Flavodoxin-like fold EA743_005160 PF00202 Aminotransferase class-III EA743_005165 PF00282 Pyridoxal-dependent decarboxylase conserved domain EA743_005170 PF00171 Aldehyde dehydrogenase family EA743_005175 PF01037 Lrp/AsnC ligand binding domain EA743_005180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EA743_005180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EA743_005180 PF00205 Thiamine pyrophosphate enzyme, central domain EA743_005185 PF00324 Amino acid permease EA743_005190 PF12849 PBP superfamily domain EA743_005195 PF00528 Binding-protein-dependent transport system inner membrane component EA743_005200 PF00528 Binding-protein-dependent transport system inner membrane component EA743_005205 PF00005 ABC transporter EA743_005210 PF08496 Peptidase family S49 N-terminal EA743_005210 PF01343 Peptidase family S49 EA743_005225 PF00206 Lyase EA743_005225 PF08328 Adenylosuccinate lyase C-terminal EA743_005230 PF04356 Protein of unknown function (DUF489) EA743_005240 PF00293 NUDIX domain EA743_005240 PF13344 Haloacid dehalogenase-like hydrolase EA743_005245 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_005250 PF07943 Penicillin-binding protein 5, C-terminal domain EA743_005250 PF00768 D-alanyl-D-alanine carboxypeptidase EA743_005265 PF01975 Survival protein SurE EA743_005270 PF01476 LysM domain EA743_005270 PF01551 Peptidase family M23 EA743_005275 PF03466 LysR substrate binding domain EA743_005275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_005280 PF05362 Lon protease (S16) C-terminal proteolytic domain EA743_005280 PF13654 AAA domain EA743_005285 PF07690 Major Facilitator Superfamily EA743_005290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EA743_005295 PF13593 SBF-like CPA transporter family (DUF4137) EA743_005300 PF01197 Ribosomal protein L31 EA743_005305 PF00563 EAL domain EA743_005305 PF12792 CSS motif domain associated with EAL EA743_005315 PF04055 Radical SAM superfamily EA743_005320 PF09285 Elongation factor P, C-terminal EA743_005320 PF08207 Elongation factor P (EF-P) KOW-like domain EA743_005320 PF01132 Elongation factor P (EF-P) OB domain EA743_005325 PF02554 Carbon starvation protein CstA EA743_005325 PF13722 5TM C-terminal transporter carbon starvation CstA EA743_005330 PF04328 Selenoprotein, putative EA743_005375 PF00857 Isochorismatase family EA743_005380 PF03466 LysR substrate binding domain EA743_005380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_005390 PF00743 Flavin-binding monooxygenase-like EA743_005395 PF00561 alpha/beta hydrolase fold EA743_005405 PF01370 NAD dependent epimerase/dehydratase family EA743_005410 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EA743_005410 PF12833 Helix-turn-helix domain EA743_005415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_005415 PF03466 LysR substrate binding domain EA743_005420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_005425 PF00557 Metallopeptidase family M24 EA743_005430 PF00083 Sugar (and other) transporter EA743_005435 PF02028 BCCT, betaine/carnitine/choline family transporter EA743_005440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EA743_005440 PF00355 Rieske [2Fe-2S] domain EA743_005450 PF18113 Rubredoxin binding C-terminal domain EA743_005450 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_005455 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EA743_005455 PF01266 FAD dependent oxidoreductase EA743_005475 PF00892 EamA-like transporter family EA743_005485 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EA743_005490 PF00083 Sugar (and other) transporter EA743_005495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EA743_005495 PF13378 Enolase C-terminal domain-like EA743_005515 PF13817 IS66 C-terminal element EA743_005515 PF13007 Transposase C of IS166 homeodomain EA743_005515 PF03050 Transposase IS66 family EA743_005515 PF13005 zinc-finger binding domain of transposase IS66 EA743_005525 PF00440 Bacterial regulatory proteins, tetR family EA743_005540 PF02678 Pirin EA743_005540 PF17954 Quercetinase C-terminal cupin domain EA743_005545 PF00291 Pyridoxal-phosphate dependent enzyme EA743_005550 PF13309 HTH domain EA743_005550 PF08348 YheO-like PAS domain EA743_005560 PF00501 AMP-binding enzyme EA743_005560 PF00668 Condensation domain EA743_005560 PF13193 AMP-binding enzyme C-terminal domain EA743_005560 PF00550 Phosphopantetheine attachment site EA743_005565 PF13193 AMP-binding enzyme C-terminal domain EA743_005565 PF00501 AMP-binding enzyme EA743_005565 PF00975 Thioesterase domain EA743_005565 PF00550 Phosphopantetheine attachment site EA743_005565 PF00668 Condensation domain EA743_005570 PF01032 FecCD transport family EA743_005575 PF01032 FecCD transport family EA743_005580 PF00005 ABC transporter EA743_005585 PF01497 Periplasmic binding protein EA743_005590 PF07715 TonB-dependent Receptor Plug Domain EA743_005590 PF00593 TonB dependent receptor EA743_005595 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) EA743_005600 PF00501 AMP-binding enzyme EA743_005600 PF00668 Condensation domain EA743_005600 PF00550 Phosphopantetheine attachment site EA743_005605 PF00501 AMP-binding enzyme EA743_005605 PF13193 AMP-binding enzyme C-terminal domain EA743_005610 PF00857 Isochorismatase family EA743_005610 PF00550 Phosphopantetheine attachment site EA743_005615 PF00282 Pyridoxal-dependent decarboxylase conserved domain EA743_005625 PF00664 ABC transporter transmembrane region EA743_005625 PF00005 ABC transporter EA743_005630 PF00664 ABC transporter transmembrane region EA743_005630 PF00005 ABC transporter EA743_005635 PF00975 Thioesterase domain EA743_005645 PF00425 chorismate binding enzyme EA743_005655 PF01208 Uroporphyrinogen decarboxylase (URO-D) EA743_005660 PF05675 Protein of unknown function (DUF817) EA743_005675 PF00144 Beta-lactamase EA743_005690 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_005690 PF01799 [2Fe-2S] binding domain EA743_005695 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EA743_005695 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EA743_005710 PF00218 Indole-3-glycerol phosphate synthase EA743_005715 PF02885 Glycosyl transferase family, helical bundle domain EA743_005715 PF00591 Glycosyl transferase family, a/b domain EA743_005720 PF00593 TonB dependent receptor EA743_005720 PF07715 TonB-dependent Receptor Plug Domain EA743_005725 PF11838 ERAP1-like C-terminal domain EA743_005725 PF01433 Peptidase family M1 domain EA743_005730 PF00117 Glutamine amidotransferase class-I EA743_005885 PF10548 P22AR C-terminal domain EA743_005885 PF02498 BRO family, N-terminal domain EA743_006115 PF00884 Sulfatase EA743_006115 PF08019 Phosphoethanolamine transferase EptA/EptB EA743_006145 PF00557 Metallopeptidase family M24 EA743_006145 PF05195 Aminopeptidase P, N-terminal domain EA743_006150 PF01494 FAD binding domain EA743_006155 PF01494 FAD binding domain EA743_006165 PF13411 MerR HTH family regulatory protein EA743_006175 PF01810 LysE type translocator EA743_006180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_006180 PF03466 LysR substrate binding domain EA743_006190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EA743_006195 PF02021 Uncharacterised protein family UPF0102 EA743_006200 PF04972 BON domain EA743_006210 PF00293 NUDIX domain EA743_006210 PF09297 NADH pyrophosphatase zinc ribbon domain EA743_006220 PF00929 Exonuclease EA743_006225 PF01464 Transglycosylase SLT domain EA743_006225 PF01476 LysM domain EA743_006225 PF01476 LysM domain EA743_006225 PF01464 Transglycosylase SLT domain EA743_006230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EA743_006235 PF00528 Binding-protein-dependent transport system inner membrane component EA743_006240 PF12911 N-terminal TM domain of oligopeptide transport permease C EA743_006240 PF00528 Binding-protein-dependent transport system inner membrane component EA743_006245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EA743_006245 PF00005 ABC transporter EA743_006250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_006250 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_006255 PF07715 TonB-dependent Receptor Plug Domain EA743_006255 PF00593 TonB dependent receptor EA743_006265 PF00929 Exonuclease EA743_006270 PF01979 Amidohydrolase family EA743_006275 PF00360 Phytochrome region EA743_006275 PF00990 Diguanylate cyclase, GGDEF domain EA743_006275 PF00563 EAL domain EA743_006275 PF01590 GAF domain EA743_006280 PF00764 Arginosuccinate synthase EA743_006285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_006285 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_006300 PF05987 Bacterial protein of unknown function (DUF898) EA743_006305 PF03180 NLPA lipoprotein EA743_006320 PF03783 Curli production assembly/transport component CsgG EA743_006330 PF05643 Putative bacterial lipoprotein (DUF799) EA743_006340 PF00324 Amino acid permease EA743_006345 PF01266 FAD dependent oxidoreductase EA743_006350 PF00324 Amino acid permease EA743_006360 PF00392 Bacterial regulatory proteins, gntR family EA743_006360 PF07729 FCD domain EA743_006370 PF00171 Aldehyde dehydrogenase family EA743_006380 PF00202 Aminotransferase class-III EA743_006385 PF04958 Arginine N-succinyltransferase beta subunit EA743_006390 PF00324 Amino acid permease EA743_006395 PF00171 Aldehyde dehydrogenase family EA743_006400 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EA743_006400 PF12833 Helix-turn-helix domain EA743_006405 PF00892 EamA-like transporter family EA743_006410 PF08666 SAF domain EA743_006410 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EA743_006415 PF07690 Major Facilitator Superfamily EA743_006420 PF13378 Enolase C-terminal domain-like EA743_006425 PF00701 Dihydrodipicolinate synthetase family EA743_006430 PF00171 Aldehyde dehydrogenase family EA743_006435 PF07729 FCD domain EA743_006435 PF00392 Bacterial regulatory proteins, gntR family EA743_006440 PF07519 Tannase and feruloyl esterase EA743_006455 PF03573 outer membrane porin, OprD family EA743_006460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_006460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_006460 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_006470 PF00171 Aldehyde dehydrogenase family EA743_006475 PF00378 Enoyl-CoA hydratase/isomerase EA743_006480 PF07690 Major Facilitator Superfamily EA743_006495 PF00175 Oxidoreductase NAD-binding domain EA743_006495 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_006500 PF00355 Rieske [2Fe-2S] domain EA743_006510 PF03781 Sulfatase-modifying factor enzyme 1 EA743_006515 PF00884 Sulfatase EA743_006520 PF07690 Major Facilitator Superfamily EA743_006525 PF03573 outer membrane porin, OprD family EA743_006530 PF05199 GMC oxidoreductase EA743_006535 PF07859 alpha/beta hydrolase fold EA743_006540 PF00106 short chain dehydrogenase EA743_006545 PF00743 Flavin-binding monooxygenase-like EA743_006550 PF12833 Helix-turn-helix domain EA743_006550 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EA743_006555 PF04072 Leucine carboxyl methyltransferase EA743_006560 PF00743 Flavin-binding monooxygenase-like EA743_006565 PF00106 short chain dehydrogenase EA743_006575 PF00440 Bacterial regulatory proteins, tetR family EA743_006575 PF17932 Tetracyclin repressor-like, C-terminal domain EA743_006580 PF02678 Pirin EA743_006580 PF17954 Quercetinase C-terminal cupin domain EA743_006590 PF00106 short chain dehydrogenase EA743_006595 PF00743 Flavin-binding monooxygenase-like EA743_006605 PF00860 Permease family EA743_006610 PF00962 Adenosine/AMP deaminase EA743_006615 PF01292 Prokaryotic cytochrome b561 EA743_006625 PF01351 Ribonuclease HII EA743_006630 PF02599 Global regulator protein family EA743_006635 PF13840 ACT domain EA743_006635 PF01842 ACT domain EA743_006635 PF00696 Amino acid kinase family EA743_006690 PF01726 LexA DNA binding domain EA743_006690 PF00717 Peptidase S24-like EA743_006695 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT EA743_006725 PF01695 IstB-like ATP binding protein EA743_006765 PF13737 Transposase DDE domain EA743_006825 PF13737 Transposase DDE domain EA743_006830 PF11799 impB/mucB/samB family C-terminal domain EA743_006830 PF00817 impB/mucB/samB family EA743_006830 PF13438 Domain of unknown function (DUF4113) EA743_006835 PF00717 Peptidase S24-like EA743_006845 PF13356 Arm DNA-binding domain EA743_006845 PF00589 Phage integrase family EA743_006850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EA743_006850 PF02272 DHHA1 domain EA743_006850 PF01411 tRNA synthetases class II (A) EA743_006855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EA743_006855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EA743_006865 PF13393 Histidyl-tRNA synthetase EA743_006870 PF00709 Adenylosuccinate synthetase EA743_006885 PF00248 Aldo/keto reductase family EA743_006890 PF13545 Crp-like helix-turn-helix domain EA743_006890 PF00027 Cyclic nucleotide-binding domain EA743_006895 PF02566 OsmC-like protein EA743_006910 PF17871 AAA lid domain EA743_006910 PF10431 C-terminal, D2-small domain, of ClpB protein EA743_006910 PF02861 Clp amino terminal domain, pathogenicity island component EA743_006910 PF07724 AAA domain (Cdc48 subfamily) EA743_006910 PF00004 ATPase family associated with various cellular activities (AAA) EA743_006925 PF10672 S-adenosylmethionine-dependent methyltransferase EA743_006925 PF02926 THUMP domain EA743_006925 PF01170 Putative RNA methylase family UPF0020 EA743_006935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EA743_006935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EA743_006940 PF01979 Amidohydrolase family EA743_006945 PF13488 Glycine zipper EA743_006945 PF00691 OmpA family EA743_006955 PF13417 Glutathione S-transferase, N-terminal domain EA743_006955 PF00043 Glutathione S-transferase, C-terminal domain EA743_006960 PF02390 Putative methyltransferase EA743_006970 PF00043 Glutathione S-transferase, C-terminal domain EA743_006970 PF02798 Glutathione S-transferase, N-terminal domain EA743_006980 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_006980 PF13192 Thioredoxin domain EA743_007000 PF00578 AhpC/TSA family EA743_007000 PF10417 C-terminal domain of 1-Cys peroxiredoxin EA743_007005 PF11898 Domain of unknown function (DUF3418) EA743_007005 PF04408 Helicase associated domain (HA2) EA743_007005 PF00271 Helicase conserved C-terminal domain EA743_007005 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EA743_007005 PF00270 DEAD/DEAH box helicase EA743_007010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EA743_007010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EA743_007020 PF07690 Major Facilitator Superfamily EA743_007025 PF03594 Benzoate membrane transport protein EA743_007030 PF00106 short chain dehydrogenase EA743_007035 PF00175 Oxidoreductase NAD-binding domain EA743_007035 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_007035 PF00970 Oxidoreductase FAD-binding domain EA743_007040 PF00866 Ring hydroxylating beta subunit EA743_007045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EA743_007045 PF00355 Rieske [2Fe-2S] domain EA743_007050 PF03466 LysR substrate binding domain EA743_007050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_007060 PF00403 Heavy-metal-associated domain EA743_007065 PF09278 MerR, DNA binding EA743_007065 PF00376 MerR family regulatory protein EA743_007105 PF02601 Exonuclease VII, large subunit EA743_007105 PF13742 OB-fold nucleic acid binding domain EA743_007140 PF01810 LysE type translocator EA743_007145 PF00313 'Cold-shock' DNA-binding domain EA743_007155 PF14748 Pyrroline-5-carboxylate reductase dimerisation EA743_007155 PF03807 NADP oxidoreductase coenzyme F420-dependent EA743_007185 PF07690 Major Facilitator Superfamily EA743_007190 PF01638 HxlR-like helix-turn-helix EA743_007220 PF01406 tRNA synthetases class I (C) catalytic domain EA743_007220 PF09190 DALR domain EA743_007225 PF00571 CBS domain EA743_007225 PF01380 SIS domain EA743_007240 PF03968 OstA-like protein EA743_007245 PF12399 Branched-chain amino acid ATP-binding cassette transporter EA743_007245 PF00005 ABC transporter EA743_007250 PF02321 Outer membrane efflux protein EA743_007270 PF13007 Transposase C of IS166 homeodomain EA743_007270 PF13005 zinc-finger binding domain of transposase IS66 EA743_007270 PF13817 IS66 C-terminal element EA743_007270 PF03050 Transposase IS66 family EA743_007275 PF03412 Peptidase C39 family EA743_007275 PF00664 ABC transporter transmembrane region EA743_007275 PF00005 ABC transporter EA743_007285 PF01205 Uncharacterized protein family UPF0029 EA743_007290 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_007300 PF01596 O-methyltransferase EA743_007310 PF00037 4Fe-4S binding domain EA743_007310 PF11953 Domain of unknown function (DUF3470) EA743_007320 PF05188 MutS domain II EA743_007320 PF05190 MutS family domain IV EA743_007320 PF05192 MutS domain III EA743_007320 PF01624 MutS domain I EA743_007320 PF00488 MutS domain V EA743_007325 PF01037 Lrp/AsnC ligand binding domain EA743_007330 PF00892 EamA-like transporter family EA743_007335 PF03707 Bacterial signalling protein N terminal repeat EA743_007335 PF00563 EAL domain EA743_007335 PF00990 Diguanylate cyclase, GGDEF domain EA743_007340 PF03279 Bacterial lipid A biosynthesis acyltransferase EA743_007355 PF07690 Major Facilitator Superfamily EA743_007375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EA743_007375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EA743_007395 PF13419 Haloacid dehalogenase-like hydrolase EA743_007410 PF03466 LysR substrate binding domain EA743_007410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_007415 PF01566 Natural resistance-associated macrophage protein EA743_007420 PF03746 LamB/YcsF family EA743_007425 PF07286 Protein of unknown function (DUF1445) EA743_007435 PF02785 Biotin carboxylase C-terminal domain EA743_007435 PF00289 Biotin carboxylase, N-terminal domain EA743_007435 PF00364 Biotin-requiring enzyme EA743_007435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA743_007440 PF00654 Voltage gated chloride channel EA743_007445 PF17287 POTRA domain EA743_007445 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EA743_007445 PF08479 POTRA domain, ShlB-type EA743_007450 PF05860 haemagglutination activity domain EA743_007450 PF13332 Hemagglutinin repeat EA743_007450 PF04829 Pre-toxin domain with VENN motif EA743_007450 PF13018 Extended Signal Peptide of Type V secretion system EA743_007480 PF08240 Alcohol dehydrogenase GroES-like domain EA743_007480 PF13823 Alcohol dehydrogenase GroES-associated EA743_007480 PF00107 Zinc-binding dehydrogenase EA743_007495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA743_007495 PF00289 Biotin carboxylase, N-terminal domain EA743_007495 PF02785 Biotin carboxylase C-terminal domain EA743_007500 PF02525 Flavodoxin-like fold EA743_007505 PF01638 HxlR-like helix-turn-helix EA743_007520 PF08753 NikR C terminal nickel binding domain EA743_007520 PF01402 Ribbon-helix-helix protein, copG family EA743_007525 PF01425 Amidase EA743_007530 PF00497 Bacterial extracellular solute-binding proteins, family 3 EA743_007535 PF00005 ABC transporter EA743_007605 PF01389 OmpA-like transmembrane domain EA743_007605 PF00691 OmpA family EA743_007615 PF07724 AAA domain (Cdc48 subfamily) EA743_007615 PF00004 ATPase family associated with various cellular activities (AAA) EA743_007615 PF17871 AAA lid domain EA743_007615 PF10431 C-terminal, D2-small domain, of ClpB protein EA743_007645 PF03466 LysR substrate binding domain EA743_007645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_007655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EA743_007660 PF07690 Major Facilitator Superfamily EA743_007675 PF02677 Epoxyqueuosine reductase QueH EA743_007685 PF09278 MerR, DNA binding EA743_007685 PF00376 MerR family regulatory protein EA743_007700 PF00701 Dihydrodipicolinate synthetase family EA743_007710 PF00392 Bacterial regulatory proteins, gntR family EA743_007715 PF05544 Proline racemase EA743_007720 PF01266 FAD dependent oxidoreductase EA743_007730 PF04324 BFD-like [2Fe-2S] binding domain EA743_007730 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_007740 PF00083 Sugar (and other) transporter EA743_007745 PF00171 Aldehyde dehydrogenase family EA743_007750 PF13520 Amino acid permease EA743_007755 PF03315 Serine dehydratase beta chain EA743_007755 PF03313 Serine dehydratase alpha chain EA743_007760 PF01575 MaoC like domain EA743_007760 PF00171 Aldehyde dehydrogenase family EA743_007765 PF05138 Phenylacetic acid catabolic protein EA743_007770 PF06243 Phenylacetic acid degradation B EA743_007775 PF05138 Phenylacetic acid catabolic protein EA743_007780 PF01883 Iron-sulfur cluster assembly protein EA743_007785 PF00175 Oxidoreductase NAD-binding domain EA743_007785 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_007785 PF00970 Oxidoreductase FAD-binding domain EA743_007790 PF00378 Enoyl-CoA hydratase/isomerase EA743_007795 PF00378 Enoyl-CoA hydratase/isomerase EA743_007800 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EA743_007800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EA743_007800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EA743_007805 PF00108 Thiolase, N-terminal domain EA743_007805 PF02803 Thiolase, C-terminal domain EA743_007810 PF14535 AMP-binding enzyme C-terminal domain EA743_007810 PF00501 AMP-binding enzyme EA743_007815 PF07848 PaaX-like protein EA743_007815 PF08223 PaaX-like protein C-terminal domain EA743_007820 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_007825 PF03061 Thioesterase superfamily EA743_007830 PF13086 AAA domain EA743_007830 PF13087 AAA domain EA743_007830 PF13195 Protein of unknown function (DUF4011) EA743_007830 PF13086 AAA domain EA743_007830 PF13087 AAA domain EA743_007830 PF13195 Protein of unknown function (DUF4011) EA743_007860 PF00199 Catalase EA743_007865 PF01292 Prokaryotic cytochrome b561 EA743_007885 PF12697 Alpha/beta hydrolase family EA743_007890 PF01613 Flavin reductase like domain EA743_007895 PF00296 Luciferase-like monooxygenase EA743_007900 PF00171 Aldehyde dehydrogenase family EA743_007910 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EA743_007920 PF00171 Aldehyde dehydrogenase family EA743_007925 PF02627 Carboxymuconolactone decarboxylase family EA743_007930 PF03466 LysR substrate binding domain EA743_007930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_007935 PF02525 Flavodoxin-like fold EA743_007940 PF09339 IclR helix-turn-helix domain EA743_007940 PF01614 Bacterial transcriptional regulator EA743_007945 PF01494 FAD binding domain EA743_007950 PF07702 UTRA domain EA743_007950 PF00392 Bacterial regulatory proteins, gntR family EA743_007960 PF00005 ABC transporter EA743_007960 PF08402 TOBE domain EA743_007965 PF00528 Binding-protein-dependent transport system inner membrane component EA743_007970 PF01266 FAD dependent oxidoreductase EA743_007975 PF00266 Aminotransferase class-V EA743_007980 PF13419 Haloacid dehalogenase-like hydrolase EA743_007985 PF07690 Major Facilitator Superfamily EA743_007990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_007990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_007990 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_007995 PF02515 CoA-transferase family III EA743_008000 PF09339 IclR helix-turn-helix domain EA743_008005 PF00378 Enoyl-CoA hydratase/isomerase EA743_008010 PF03060 Nitronate monooxygenase EA743_008015 PF07690 Major Facilitator Superfamily EA743_008020 PF09339 IclR helix-turn-helix domain EA743_008025 PF02803 Thiolase, C-terminal domain EA743_008025 PF00108 Thiolase, N-terminal domain EA743_008030 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EA743_008030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EA743_008030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EA743_008040 PF00378 Enoyl-CoA hydratase/isomerase EA743_008045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_008045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_008045 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_008050 PF07690 Major Facilitator Superfamily EA743_008055 PF01144 Coenzyme A transferase EA743_008060 PF01144 Coenzyme A transferase EA743_008070 PF07690 Major Facilitator Superfamily EA743_008080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_008080 PF12806 Acetyl-CoA dehydrogenase C-terminal like EA743_008080 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_008080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_008095 PF03466 LysR substrate binding domain EA743_008095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008100 PF00682 HMGL-like EA743_008105 PF00289 Biotin carboxylase, N-terminal domain EA743_008105 PF00364 Biotin-requiring enzyme EA743_008105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA743_008105 PF02785 Biotin carboxylase C-terminal domain EA743_008110 PF00378 Enoyl-CoA hydratase/isomerase EA743_008115 PF01039 Carboxyl transferase domain EA743_008120 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_008120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_008120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_008125 PF00440 Bacterial regulatory proteins, tetR family EA743_008130 PF00501 AMP-binding enzyme EA743_008130 PF13193 AMP-binding enzyme C-terminal domain EA743_008150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008150 PF03466 LysR substrate binding domain EA743_008180 PF00994 Probable molybdopterin binding domain EA743_008180 PF18146 Damage-inducible protein CinA KH domain EA743_008180 PF02464 Competence-damaged protein EA743_008190 PF06628 Catalase-related immune-responsive EA743_008190 PF18011 C-terminal domain found in long catalases EA743_008190 PF00199 Catalase EA743_008215 PF00717 Peptidase S24-like EA743_008225 PF13404 AsnC-type helix-turn-helix domain EA743_008225 PF01037 Lrp/AsnC ligand binding domain EA743_008235 PF09308 LuxQ, periplasmic EA743_008235 PF00512 His Kinase A (phospho-acceptor) domain EA743_008235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_008235 PF00072 Response regulator receiver domain EA743_008240 PF00072 Response regulator receiver domain EA743_008255 PF00528 Binding-protein-dependent transport system inner membrane component EA743_008260 PF00528 Binding-protein-dependent transport system inner membrane component EA743_008265 PF00005 ABC transporter EA743_008270 PF00497 Bacterial extracellular solute-binding proteins, family 3 EA743_008275 PF00497 Bacterial extracellular solute-binding proteins, family 3 EA743_008285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008285 PF03466 LysR substrate binding domain EA743_008290 PF01810 LysE type translocator EA743_008295 PF00266 Aminotransferase class-V EA743_008305 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_008310 PF00581 Rhodanese-like domain EA743_008320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008320 PF03466 LysR substrate binding domain EA743_008325 PF02798 Glutathione S-transferase, N-terminal domain EA743_008330 PF14834 Glutathione S-transferase, C-terminal domain EA743_008330 PF02798 Glutathione S-transferase, N-terminal domain EA743_008335 PF03466 LysR substrate binding domain EA743_008335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008340 PF03788 LrgA family EA743_008345 PF04172 LrgB-like family EA743_008350 PF00392 Bacterial regulatory proteins, gntR family EA743_008350 PF00155 Aminotransferase class I and II EA743_008365 PF07690 Major Facilitator Superfamily EA743_008375 PF03466 LysR substrate binding domain EA743_008375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008380 PF16957 Malonate decarboxylase, alpha subunit, transporter EA743_008385 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EA743_008390 PF06857 Malonate decarboxylase delta subunit (MdcD) EA743_008395 PF01039 Carboxyl transferase domain EA743_008405 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG EA743_008410 PF00698 Acyl transferase domain EA743_008425 PF03466 LysR substrate binding domain EA743_008425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008430 PF00392 Bacterial regulatory proteins, gntR family EA743_008430 PF00155 Aminotransferase class I and II EA743_008440 PF02322 Cytochrome bd terminal oxidase subunit II EA743_008445 PF01654 Cytochrome bd terminal oxidase subunit I EA743_008465 PF00296 Luciferase-like monooxygenase EA743_008470 PF00083 Sugar (and other) transporter EA743_008490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EA743_008495 PF00005 ABC transporter EA743_008500 PF00528 Binding-protein-dependent transport system inner membrane component EA743_008505 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EA743_008510 PF01177 Asp/Glu/Hydantoin racemase EA743_008515 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EA743_008525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008525 PF03466 LysR substrate binding domain EA743_008535 PF01979 Amidohydrolase family EA743_008535 PF13382 Adenine deaminase C-terminal domain EA743_008545 PF03960 ArsC family EA743_008550 PF01022 Bacterial regulatory protein, arsR family EA743_008555 PF01758 Sodium Bile acid symporter family EA743_008560 PF03466 LysR substrate binding domain EA743_008560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008575 PF13192 Thioredoxin domain EA743_008575 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_008590 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_008595 PF00588 SpoU rRNA Methylase family EA743_008600 PF02811 PHP domain EA743_008600 PF01336 OB-fold nucleic acid binding domain EA743_008600 PF07733 Bacterial DNA polymerase III alpha NTPase domain EA743_008600 PF14579 Helix-hairpin-helix motif EA743_008600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EA743_008605 PF17763 Glutaminase/Asparaginase C-terminal domain EA743_008605 PF00710 Asparaginase, N-terminal EA743_008610 PF00375 Sodium:dicarboxylate symporter family EA743_008615 PF00155 Aminotransferase class I and II EA743_008620 PF01641 SelR domain EA743_008625 PF00255 Glutathione peroxidase EA743_008630 PF12852 Cupin EA743_008630 PF12833 Helix-turn-helix domain EA743_008640 PF00155 Aminotransferase class I and II EA743_008645 PF08335 GlnD PII-uridylyltransferase EA743_008645 PF01966 HD domain EA743_008645 PF01909 Nucleotidyltransferase domain EA743_008650 PF02222 ATP-grasp domain EA743_008660 PF05437 Branched-chain amino acid transport protein (AzlD) EA743_008665 PF03591 AzlC protein EA743_008690 PF01926 50S ribosome-binding GTPase EA743_008690 PF06071 Protein of unknown function (DUF933) EA743_008695 PF00528 Binding-protein-dependent transport system inner membrane component EA743_008700 PF00005 ABC transporter EA743_008700 PF09383 NIL domain EA743_008705 PF03180 NLPA lipoprotein EA743_008710 PF03180 NLPA lipoprotein EA743_008715 PF00296 Luciferase-like monooxygenase EA743_008725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_008725 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EA743_008740 PF00528 Binding-protein-dependent transport system inner membrane component EA743_008745 PF00528 Binding-protein-dependent transport system inner membrane component EA743_008750 PF00005 ABC transporter EA743_008760 PF01037 Lrp/AsnC ligand binding domain EA743_008765 PF01709 Transcriptional regulator EA743_008775 PF00440 Bacterial regulatory proteins, tetR family EA743_008795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_008795 PF03466 LysR substrate binding domain EA743_008805 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EA743_008815 PF00892 EamA-like transporter family EA743_008840 PF00577 Outer membrane usher protein EA743_008840 PF13954 PapC N-terminal domain EA743_008840 PF13953 PapC C-terminal domain EA743_008845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EA743_008845 PF02753 Pili assembly chaperone PapD, C-terminal domain EA743_008850 PF16970 Type-1 fimbrial protein, A EA743_008865 PF04055 Radical SAM superfamily EA743_008865 PF06968 Biotin and Thiamin Synthesis associated domain EA743_008870 PF08331 Domain of unknown function (DUF1730) EA743_008875 PF01256 Carbohydrate kinase EA743_008875 PF03853 YjeF-related protein N-terminus EA743_008880 PF02075 Crossover junction endodeoxyribonuclease RuvC EA743_008895 PF00905 Penicillin binding protein transpeptidase domain EA743_008920 PF02773 S-adenosylmethionine synthetase, C-terminal domain EA743_008920 PF00438 S-adenosylmethionine synthetase, N-terminal domain EA743_008920 PF02772 S-adenosylmethionine synthetase, central domain EA743_008925 PF00456 Transketolase, thiamine diphosphate binding domain EA743_008925 PF02780 Transketolase, C-terminal domain EA743_008925 PF02779 Transketolase, pyrimidine binding domain EA743_008935 PF04264 YceI-like domain EA743_008945 PF09992 Phosphodiester glycosidase EA743_008955 PF05958 tRNA (Uracil-5-)-methyltransferase EA743_008960 PF04229 GrpB protein EA743_008965 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EA743_008965 PF01619 Proline dehydrogenase EA743_008965 PF14850 DNA-binding domain of Proline dehydrogenase EA743_008965 PF00171 Aldehyde dehydrogenase family EA743_008970 PF01037 Lrp/AsnC ligand binding domain EA743_008975 PF00474 Sodium:solute symporter family EA743_008980 PF02146 Sir2 family EA743_008985 PF01597 Glycine cleavage H-protein EA743_008990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EA743_008990 PF12833 Helix-turn-helix domain EA743_009000 PF00664 ABC transporter transmembrane region EA743_009000 PF00005 ABC transporter EA743_009005 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EA743_009010 PF06912 Protein of unknown function (DUF1275) EA743_009015 PF00375 Sodium:dicarboxylate symporter family EA743_009030 PF08007 Cupin superfamily protein EA743_009035 PF02545 Maf-like protein EA743_009045 PF00162 Phosphoglycerate kinase EA743_009055 PF01116 Fructose-bisphosphate aldolase class-II EA743_009060 PF09312 SurA N-terminal domain EA743_009060 PF00639 PPIC-type PPIASE domain EA743_009065 PF03968 OstA-like protein EA743_009065 PF04453 LPS transport system D EA743_009070 PF01636 Phosphotransferase enzyme family EA743_009075 PF00483 Nucleotidyl transferase EA743_009080 PF02527 rRNA small subunit methyltransferase G EA743_009085 PF13614 AAA domain EA743_009090 PF02195 ParB-like nuclease domain EA743_009090 PF17762 HTH domain found in ParB protein EA743_009095 PF01618 MotA/TolQ/ExbB proton channel family EA743_009105 PF00664 ABC transporter transmembrane region EA743_009105 PF00005 ABC transporter EA743_009110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EA743_009115 PF02348 Cytidylyltransferase EA743_009120 PF09115 DNA polymerase III, delta subunit, C terminal EA743_009130 PF01026 TatD related DNase EA743_009145 PF02501 Type II secretion system (T2SS), protein I EA743_009145 PF07963 Prokaryotic N-terminal methylation motif EA743_009150 PF07963 Prokaryotic N-terminal methylation motif EA743_009150 PF11612 Type II secretion system (T2SS), protein J EA743_009155 PF03934 Type II secretion system (T2SS), protein K EA743_009165 PF03167 Uracil DNA glycosylase superfamily EA743_009175 PF14437 MafB19-like deaminase EA743_009185 PF02224 Cytidylate kinase EA743_009190 PF00575 S1 RNA binding domain EA743_009195 PF00216 Bacterial DNA-binding protein EA743_009205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EA743_009215 PF00743 Flavin-binding monooxygenase-like EA743_009225 PF03969 AFG1-like ATPase EA743_009230 PF01274 Malate synthase EA743_009240 PF02472 Biopolymer transport protein ExbD/TolR EA743_009245 PF02472 Biopolymer transport protein ExbD/TolR EA743_009250 PF01618 MotA/TolQ/ExbB proton channel family EA743_009260 PF07715 TonB-dependent Receptor Plug Domain EA743_009260 PF00593 TonB dependent receptor EA743_009280 PF01432 Peptidase family M3 EA743_009285 PF00528 Binding-protein-dependent transport system inner membrane component EA743_009290 PF00528 Binding-protein-dependent transport system inner membrane component EA743_009295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EA743_009295 PF00005 ABC transporter EA743_009310 PF00459 Inositol monophosphatase family EA743_009320 PF01649 Ribosomal protein S20 EA743_009325 PF13460 NAD(P)H-binding EA743_009330 PF03737 Aldolase/RraA EA743_009350 PF03461 TRCF domain EA743_009350 PF17757 UvrB interaction domain EA743_009350 PF02559 CarD-like/TRCF domain EA743_009350 PF00270 DEAD/DEAH box helicase EA743_009350 PF00271 Helicase conserved C-terminal domain EA743_009360 PF00211 Adenylate and Guanylate cyclase catalytic domain EA743_009365 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_009370 PF00012 Hsp70 protein EA743_009375 PF00226 DnaJ domain EA743_009375 PF07743 HSCB C-terminal oligomerisation domain EA743_009380 PF01521 Iron-sulphur cluster biosynthesis EA743_009385 PF01592 NifU-like N terminal domain EA743_009390 PF00266 Aminotransferase class-V EA743_009395 PF02082 Transcriptional regulator EA743_009410 PF00216 Bacterial DNA-binding protein EA743_009415 PF00639 PPIC-type PPIASE domain EA743_009415 PF09312 SurA N-terminal domain EA743_009420 PF12852 Cupin EA743_009420 PF12833 Helix-turn-helix domain EA743_009425 PF00487 Fatty acid desaturase EA743_009430 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_009430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_009430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_009435 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_009435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_009435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_009440 PF03109 ABC1 family EA743_009450 PF04073 Aminoacyl-tRNA editing domain EA743_009455 PF06276 Ferric iron reductase FhuF-like transporter EA743_009455 PF04183 IucA / IucC family EA743_009460 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) EA743_009465 PF07690 Major Facilitator Superfamily EA743_009470 PF04183 IucA / IucC family EA743_009470 PF06276 Ferric iron reductase FhuF-like transporter EA743_009475 PF04183 IucA / IucC family EA743_009475 PF06276 Ferric iron reductase FhuF-like transporter EA743_009485 PF03737 Aldolase/RraA EA743_009490 PF07715 TonB-dependent Receptor Plug Domain EA743_009490 PF00593 TonB dependent receptor EA743_009515 PF13419 Haloacid dehalogenase-like hydrolase EA743_009525 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EA743_009530 PF02277 Phosphoribosyltransferase EA743_009545 PF02654 Cobalamin-5-phosphate synthase EA743_009550 PF00793 DAHP synthetase I family EA743_009555 PF01925 Sulfite exporter TauE/SafE EA743_009575 PF07715 TonB-dependent Receptor Plug Domain EA743_009575 PF00593 TonB dependent receptor EA743_009580 PF02684 Lipid-A-disaccharide synthetase EA743_009590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_009595 PF00005 ABC transporter EA743_009635 PF13005 zinc-finger binding domain of transposase IS66 EA743_009635 PF13007 Transposase C of IS166 homeodomain EA743_009635 PF13817 IS66 C-terminal element EA743_009635 PF03050 Transposase IS66 family EA743_009645 PF01230 HIT domain EA743_009675 PF08241 Methyltransferase domain EA743_009680 PF00561 alpha/beta hydrolase fold EA743_009685 PF01053 Cys/Met metabolism PLP-dependent enzyme EA743_009695 PF02575 YbaB/EbfC DNA-binding family EA743_009700 PF02132 RecR protein EA743_009700 PF13662 Toprim domain EA743_009705 PF01612 3'-5' exonuclease EA743_009705 PF00570 HRDC domain EA743_009725 PF05166 YcgL domain EA743_009735 PF00004 ATPase family associated with various cellular activities (AAA) EA743_009735 PF17862 AAA+ lid domain EA743_009735 PF01434 Peptidase family M41 EA743_009745 PF00291 Pyridoxal-phosphate dependent enzyme EA743_009750 PF05175 Methyltransferase small domain EA743_009755 PF01264 Chorismate synthase EA743_009770 PF13817 IS66 C-terminal element EA743_009770 PF13005 zinc-finger binding domain of transposase IS66 EA743_009770 PF13007 Transposase C of IS166 homeodomain EA743_009770 PF03050 Transposase IS66 family EA743_009775 PF08448 PAS fold EA743_009775 PF00990 Diguanylate cyclase, GGDEF domain EA743_009790 PF04055 Radical SAM superfamily EA743_009795 PF00676 Dehydrogenase E1 component EA743_009800 PF02780 Transketolase, C-terminal domain EA743_009800 PF02779 Transketolase, pyrimidine binding domain EA743_009805 PF00364 Biotin-requiring enzyme EA743_009805 PF02817 e3 binding domain EA743_009805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EA743_009810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EA743_009810 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_009815 PF00106 short chain dehydrogenase EA743_009820 PF08240 Alcohol dehydrogenase GroES-like domain EA743_009820 PF00107 Zinc-binding dehydrogenase EA743_009825 PF01062 Bestrophin, RFP-TM, chloride channel EA743_009830 PF02954 Bacterial regulatory protein, Fis family EA743_009830 PF00158 Sigma-54 interaction domain EA743_009830 PF00072 Response regulator receiver domain EA743_009835 PF00753 Metallo-beta-lactamase superfamily EA743_009835 PF04273 Putative phosphatase (DUF442) EA743_009840 PF04273 Putative phosphatase (DUF442) EA743_009840 PF00753 Metallo-beta-lactamase superfamily EA743_009845 PF01925 Sulfite exporter TauE/SafE EA743_009860 PF06445 GyrI-like small molecule binding domain EA743_009860 PF12833 Helix-turn-helix domain EA743_009865 PF01638 HxlR-like helix-turn-helix EA743_009870 PF02525 Flavodoxin-like fold EA743_009875 PF02417 Chromate transporter EA743_009895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EA743_009900 PF00528 Binding-protein-dependent transport system inner membrane component EA743_009905 PF00005 ABC transporter EA743_009920 PF00083 Sugar (and other) transporter EA743_009925 PF07715 TonB-dependent Receptor Plug Domain EA743_009925 PF00593 TonB dependent receptor EA743_009930 PF10415 Fumarase C C-terminus EA743_009930 PF00206 Lyase EA743_009945 PF03466 LysR substrate binding domain EA743_009945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_009955 PF03466 LysR substrate binding domain EA743_009955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_009960 PF00108 Thiolase, N-terminal domain EA743_009960 PF02803 Thiolase, C-terminal domain EA743_009965 PF02667 Short chain fatty acid transporter EA743_009970 PF01144 Coenzyme A transferase EA743_009975 PF01144 Coenzyme A transferase EA743_009980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_009980 PF03466 LysR substrate binding domain EA743_010000 PF00440 Bacterial regulatory proteins, tetR family EA743_010020 PF12833 Helix-turn-helix domain EA743_010020 PF06719 AraC-type transcriptional regulator N-terminus EA743_010025 PF07690 Major Facilitator Superfamily EA743_010030 PF01738 Dienelactone hydrolase family EA743_010045 PF01613 Flavin reductase like domain EA743_010055 PF14525 AraC-binding-like domain EA743_010055 PF12833 Helix-turn-helix domain EA743_010060 PF00175 Oxidoreductase NAD-binding domain EA743_010060 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_010060 PF00970 Oxidoreductase FAD-binding domain EA743_010065 PF00866 Ring hydroxylating beta subunit EA743_010070 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EA743_010070 PF00355 Rieske [2Fe-2S] domain EA743_010075 PF03459 TOBE domain EA743_010075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010085 PF00528 Binding-protein-dependent transport system inner membrane component EA743_010090 PF03459 TOBE domain EA743_010090 PF00005 ABC transporter EA743_010095 PF00106 short chain dehydrogenase EA743_010100 PF00857 Isochorismatase family EA743_010100 PF00550 Phosphopantetheine attachment site EA743_010110 PF00149 Calcineurin-like phosphoesterase EA743_010115 PF02503 Polyphosphate kinase middle domain EA743_010115 PF17941 Polyphosphate kinase C-terminal domain 1 EA743_010115 PF13090 Polyphosphate kinase C-terminal domain 2 EA743_010115 PF13089 Polyphosphate kinase N-terminal domain EA743_010120 PF08042 PqqA family EA743_010125 PF12706 Beta-lactamase superfamily domain EA743_010130 PF03070 TENA/THI-4/PQQC family EA743_010135 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EA743_010140 PF04055 Radical SAM superfamily EA743_010140 PF13186 Iron-sulfur cluster-binding domain EA743_010145 PF01244 Membrane dipeptidase (Peptidase family M19) EA743_010180 PF13007 Transposase C of IS166 homeodomain EA743_010180 PF13005 zinc-finger binding domain of transposase IS66 EA743_010180 PF13817 IS66 C-terminal element EA743_010180 PF03050 Transposase IS66 family EA743_010200 PF00199 Catalase EA743_010210 PF00107 Zinc-binding dehydrogenase EA743_010210 PF08240 Alcohol dehydrogenase GroES-like domain EA743_010220 PF00419 Fimbrial protein EA743_010225 PF00577 Outer membrane usher protein EA743_010225 PF13953 PapC C-terminal domain EA743_010225 PF13954 PapC N-terminal domain EA743_010230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EA743_010230 PF02753 Pili assembly chaperone PapD, C-terminal domain EA743_010260 PF00005 ABC transporter EA743_010260 PF17755 UvrA DNA-binding domain EA743_010260 PF17760 UvrA interaction domain EA743_010265 PF00873 AcrB/AcrD/AcrF family EA743_010270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_010270 PF00529 HlyD membrane-fusion protein of T1SS EA743_010275 PF00072 Response regulator receiver domain EA743_010275 PF00486 Transcriptional regulatory protein, C terminal EA743_010295 PF13005 zinc-finger binding domain of transposase IS66 EA743_010295 PF13817 IS66 C-terminal element EA743_010295 PF13007 Transposase C of IS166 homeodomain EA743_010295 PF03050 Transposase IS66 family EA743_010310 PF02311 AraC-like ligand binding domain EA743_010310 PF12833 Helix-turn-helix domain EA743_010315 PF12146 Serine aminopeptidase, S33 EA743_010330 PF02515 CoA-transferase family III EA743_010335 PF00682 HMGL-like EA743_010340 PF03600 Citrate transporter EA743_010345 PF09339 IclR helix-turn-helix domain EA743_010345 PF01614 Bacterial transcriptional regulator EA743_010355 PF03466 LysR substrate binding domain EA743_010355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010360 PF03573 outer membrane porin, OprD family EA743_010365 PF07690 Major Facilitator Superfamily EA743_010365 PF00083 Sugar (and other) transporter EA743_010395 PF02689 Helicase EA743_010395 PF05970 PIF1-like helicase EA743_010420 PF13286 Phosphohydrolase-associated domain EA743_010420 PF01966 HD domain EA743_010425 PF13291 ACT domain EA743_010425 PF04607 Region found in RelA / SpoT proteins EA743_010425 PF02824 TGS domain EA743_010435 PF01975 Survival protein SurE EA743_010460 PF07690 Major Facilitator Superfamily EA743_010465 PF13533 Biotin-lipoyl like EA743_010485 PF14572 Phosphoribosyl synthetase-associated domain EA743_010485 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EA743_010505 PF00005 ABC transporter EA743_010520 PF00107 Zinc-binding dehydrogenase EA743_010520 PF08240 Alcohol dehydrogenase GroES-like domain EA743_010535 PF12833 Helix-turn-helix domain EA743_010535 PF06719 AraC-type transcriptional regulator N-terminus EA743_010540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EA743_010540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EA743_010545 PF07690 Major Facilitator Superfamily EA743_010550 PF01370 NAD dependent epimerase/dehydratase family EA743_010555 PF03466 LysR substrate binding domain EA743_010555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010565 PF00920 Dehydratase family EA743_010570 PF00171 Aldehyde dehydrogenase family EA743_010585 PF00529 HlyD membrane-fusion protein of T1SS EA743_010585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_010610 PF03466 LysR substrate binding domain EA743_010610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010620 PF08450 SMP-30/Gluconolactonase/LRE-like region EA743_010635 PF04909 Amidohydrolase EA743_010640 PF07690 Major Facilitator Superfamily EA743_010660 PF00512 His Kinase A (phospho-acceptor) domain EA743_010660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_010665 PF00145 C-5 cytosine-specific DNA methylase EA743_010680 PF07687 Peptidase dimerisation domain EA743_010680 PF01546 Peptidase family M20/M25/M40 EA743_010690 PF00999 Sodium/hydrogen exchanger family EA743_010690 PF02254 TrkA-N domain EA743_010695 PF07995 Glucose / Sorbosone dehydrogenase EA743_010700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010700 PF03466 LysR substrate binding domain EA743_010705 PF00857 Isochorismatase family EA743_010715 PF00440 Bacterial regulatory proteins, tetR family EA743_010715 PF08359 YsiA-like protein, C-terminal region EA743_010720 PF12706 Beta-lactamase superfamily domain EA743_010730 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_010740 PF00376 MerR family regulatory protein EA743_010740 PF09278 MerR, DNA binding EA743_010755 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_010755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_010760 PF00561 alpha/beta hydrolase fold EA743_010770 PF00171 Aldehyde dehydrogenase family EA743_010780 PF07690 Major Facilitator Superfamily EA743_010785 PF00920 Dehydratase family EA743_010790 PF07729 FCD domain EA743_010790 PF00392 Bacterial regulatory proteins, gntR family EA743_010800 PF03466 LysR substrate binding domain EA743_010800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EA743_010805 PF13378 Enolase C-terminal domain-like EA743_010810 PF02426 Muconolactone delta-isomerase EA743_010815 PF04444 Catechol dioxygenase N terminus EA743_010815 PF00775 Dioxygenase EA743_010820 PF01144 Coenzyme A transferase EA743_010825 PF01144 Coenzyme A transferase EA743_010830 PF00108 Thiolase, N-terminal domain EA743_010830 PF02803 Thiolase, C-terminal domain EA743_010835 PF12146 Serine aminopeptidase, S33 EA743_010840 PF01804 Penicillin amidase EA743_010845 PF00171 Aldehyde dehydrogenase family EA743_010855 PF02728 Copper amine oxidase, N3 domain EA743_010855 PF02727 Copper amine oxidase, N2 domain EA743_010855 PF01179 Copper amine oxidase, enzyme domain EA743_010855 PF07833 Copper amine oxidase N-terminal domain EA743_010860 PF12833 Helix-turn-helix domain EA743_010860 PF02311 AraC-like ligand binding domain EA743_010865 PF01613 Flavin reductase like domain EA743_010870 PF00175 Oxidoreductase NAD-binding domain EA743_010870 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_010885 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EA743_010885 PF00355 Rieske [2Fe-2S] domain EA743_010900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EA743_010905 PF01425 Amidase EA743_010915 PF07690 Major Facilitator Superfamily EA743_010925 PF00106 short chain dehydrogenase EA743_010940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_010940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_010940 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_010945 PF03466 LysR substrate binding domain EA743_010945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_010950 PF09339 IclR helix-turn-helix domain EA743_010950 PF01614 Bacterial transcriptional regulator EA743_010955 PF00753 Metallo-beta-lactamase superfamily EA743_010965 PF04143 Sulphur transport EA743_010975 PF01011 PQQ enzyme repeat EA743_010975 PF13360 PQQ-like domain EA743_010980 PF04966 Carbohydrate-selective porin, OprB family EA743_010985 PF05048 Periplasmic copper-binding protein (NosD) EA743_010990 PF01487 Type I 3-dehydroquinase EA743_010995 PF00775 Dioxygenase EA743_011000 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EA743_011000 PF00775 Dioxygenase EA743_011005 PF02627 Carboxymuconolactone decarboxylase family EA743_011010 PF07690 Major Facilitator Superfamily EA743_011015 PF00561 alpha/beta hydrolase fold EA743_011020 PF10397 Adenylosuccinate lyase C-terminus EA743_011020 PF00206 Lyase EA743_011025 PF00108 Thiolase, N-terminal domain EA743_011025 PF02803 Thiolase, C-terminal domain EA743_011030 PF01144 Coenzyme A transferase EA743_011035 PF01144 Coenzyme A transferase EA743_011040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EA743_011045 PF04977 Septum formation initiator EA743_011050 PF04239 Protein of unknown function (DUF421) EA743_011055 PF00113 Enolase, C-terminal TIM barrel domain EA743_011055 PF03952 Enolase, N-terminal domain EA743_011060 PF00793 DAHP synthetase I family EA743_011065 PF06418 CTP synthase N-terminus EA743_011065 PF00117 Glutamine amidotransferase class-I EA743_011095 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_011095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EA743_011110 PF00793 DAHP synthetase I family EA743_011115 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EA743_011120 PF10431 C-terminal, D2-small domain, of ClpB protein EA743_011120 PF00004 ATPase family associated with various cellular activities (AAA) EA743_011120 PF07724 AAA domain (Cdc48 subfamily) EA743_011120 PF17871 AAA lid domain EA743_011120 PF02861 Clp amino terminal domain, pathogenicity island component EA743_011125 PF02617 ATP-dependent Clp protease adaptor protein ClpS EA743_011135 PF02774 Semialdehyde dehydrogenase, dimerisation domain EA743_011135 PF01118 Semialdehyde dehydrogenase, NAD binding domain EA743_011150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EA743_011155 PF00585 C-terminal regulatory domain of Threonine dehydratase EA743_011155 PF00291 Pyridoxal-phosphate dependent enzyme EA743_011160 PF02254 TrkA-N domain EA743_011160 PF02080 TrkA-C domain EA743_011165 PF02386 Cation transport protein EA743_011170 PF02253 Phospholipase A1 EA743_011175 PF08367 Peptidase M16C associated EA743_011175 PF00675 Insulinase (Peptidase family M16) EA743_011175 PF05193 Peptidase M16 inactive domain EA743_011180 PF00593 TonB dependent receptor EA743_011180 PF07715 TonB-dependent Receptor Plug Domain EA743_011185 PF00294 pfkB family carbohydrate kinase EA743_011195 PF07290 Protein of unknown function (DUF1449) EA743_011210 PF13005 zinc-finger binding domain of transposase IS66 EA743_011210 PF13817 IS66 C-terminal element EA743_011210 PF03050 Transposase IS66 family EA743_011210 PF13007 Transposase C of IS166 homeodomain EA743_011220 PF01654 Cytochrome bd terminal oxidase subunit I EA743_011225 PF02322 Cytochrome bd terminal oxidase subunit II EA743_011230 PF08173 Membrane bound YbgT-like protein EA743_011240 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EA743_011250 PF00448 SRP54-type protein, GTPase domain EA743_011250 PF02881 SRP54-type protein, helical bundle domain EA743_011275 PF00571 CBS domain EA743_011275 PF00478 IMP dehydrogenase / GMP reductase domain EA743_011280 PF00202 Aminotransferase class-III EA743_011285 PF00462 Glutaredoxin EA743_011295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_011295 PF03466 LysR substrate binding domain EA743_011300 PF00557 Metallopeptidase family M24 EA743_011305 PF05525 Branched-chain amino acid transport protein EA743_011330 PF00391 PEP-utilising enzyme, mobile domain EA743_011330 PF05524 PEP-utilising enzyme, N-terminal EA743_011330 PF02896 PEP-utilising enzyme, TIM barrel domain EA743_011330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EA743_011330 PF00381 PTS HPr component phosphorylation site EA743_011335 PF00294 pfkB family carbohydrate kinase EA743_011340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EA743_011340 PF02378 Phosphotransferase system, EIIC EA743_011355 PF00563 EAL domain EA743_011355 PF03707 Bacterial signalling protein N terminal repeat EA743_011355 PF00990 Diguanylate cyclase, GGDEF domain EA743_011365 PF13007 Transposase C of IS166 homeodomain EA743_011365 PF13817 IS66 C-terminal element EA743_011365 PF03050 Transposase IS66 family EA743_011365 PF13005 zinc-finger binding domain of transposase IS66 EA743_011385 PF07995 Glucose / Sorbosone dehydrogenase EA743_011390 PF02586 SOS response associated peptidase (SRAP) EA743_011395 PF01740 STAS domain EA743_011395 PF00916 Sulfate permease family EA743_011400 PF00082 Subtilase family EA743_011400 PF05922 Peptidase inhibitor I9 EA743_011410 PF00324 Amino acid permease EA743_011415 PF00266 Aminotransferase class-V EA743_011420 PF01037 Lrp/AsnC ligand binding domain EA743_011445 PF13419 Haloacid dehalogenase-like hydrolase EA743_011450 PF01479 S4 domain EA743_011455 PF00154 recA bacterial DNA recombination protein EA743_011460 PF02631 RecX family EA743_011475 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_011475 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EA743_011480 PF07977 FabA-like domain EA743_011485 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_011485 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EA743_011495 PF07244 Surface antigen variable number repeat EA743_011495 PF01103 Surface antigen EA743_011500 PF13180 PDZ domain EA743_011500 PF02163 Peptidase family M50 EA743_011500 PF17820 PDZ domain EA743_011505 PF13288 DXP reductoisomerase C-terminal domain EA743_011505 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EA743_011505 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EA743_011515 PF01255 Putative undecaprenyl diphosphate synthase EA743_011520 PF01765 Ribosome recycling factor EA743_011525 PF00696 Amino acid kinase family EA743_011530 PF00919 Uncharacterized protein family UPF0004 EA743_011530 PF18693 TRAM domain EA743_011530 PF04055 Radical SAM superfamily EA743_011540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_011540 PF00512 His Kinase A (phospho-acceptor) domain EA743_011540 PF00989 PAS fold EA743_011545 PF00072 Response regulator receiver domain EA743_011545 PF00158 Sigma-54 interaction domain EA743_011545 PF02954 Bacterial regulatory protein, Fis family EA743_011565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EA743_011565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EA743_011575 PF02542 YgbB family EA743_011585 PF01266 FAD dependent oxidoreductase EA743_011615 PF00206 Lyase EA743_011615 PF10415 Fumarase C C-terminus EA743_011620 PF16363 GDP-mannose 4,6 dehydratase EA743_011625 PF02635 DsrE/DsrF-like family EA743_011645 PF00892 EamA-like transporter family EA743_011650 PF00392 Bacterial regulatory proteins, gntR family EA743_011650 PF00155 Aminotransferase class I and II EA743_011655 PF01638 HxlR-like helix-turn-helix EA743_011660 PF00994 Probable molybdopterin binding domain EA743_011660 PF03454 MoeA C-terminal region (domain IV) EA743_011660 PF03453 MoeA N-terminal region (domain I and II) EA743_011665 PF01967 MoaC family EA743_011665 PF00994 Probable molybdopterin binding domain EA743_011670 PF02391 MoaE protein EA743_011680 PF06463 Molybdenum Cofactor Synthesis C EA743_011680 PF04055 Radical SAM superfamily EA743_011685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EA743_011685 PF00384 Molybdopterin oxidoreductase EA743_011685 PF01568 Molydopterin dinucleotide binding domain EA743_011690 PF12804 MobA-like NTP transferase domain EA743_011695 PF01568 Molydopterin dinucleotide binding domain EA743_011695 PF00384 Molybdopterin oxidoreductase EA743_011695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EA743_011695 PF04324 BFD-like [2Fe-2S] binding domain EA743_011700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EA743_011700 PF18267 Rubredoxin NAD+ reductase C-terminal domain EA743_011700 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_011700 PF04324 BFD-like [2Fe-2S] binding domain EA743_011700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EA743_011705 PF18267 Rubredoxin NAD+ reductase C-terminal domain EA743_011705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EA743_011705 PF04324 BFD-like [2Fe-2S] binding domain EA743_011705 PF13806 Rieske-like [2Fe-2S] domain EA743_011705 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_011705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EA743_011715 PF00072 Response regulator receiver domain EA743_011715 PF00486 Transcriptional regulatory protein, C terminal EA743_011720 PF00005 ABC transporter EA743_011725 PF00817 impB/mucB/samB family EA743_011725 PF11799 impB/mucB/samB family C-terminal domain EA743_011725 PF13438 Domain of unknown function (DUF4113) EA743_011730 PF01220 Dehydroquinase class II EA743_011735 PF00364 Biotin-requiring enzyme EA743_011740 PF02785 Biotin carboxylase C-terminal domain EA743_011740 PF00289 Biotin carboxylase, N-terminal domain EA743_011740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA743_011750 PF12832 MFS_1 like family EA743_011770 PF00717 Peptidase S24-like EA743_011780 PF13737 Transposase DDE domain EA743_011850 PF13007 Transposase C of IS166 homeodomain EA743_011850 PF13005 zinc-finger binding domain of transposase IS66 EA743_011850 PF13817 IS66 C-terminal element EA743_011850 PF03050 Transposase IS66 family EA743_011885 PF02768 DNA polymerase III beta subunit, C-terminal domain EA743_011885 PF02767 DNA polymerase III beta subunit, central domain EA743_011885 PF00712 DNA polymerase III beta subunit, N-terminal domain EA743_011930 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EA743_012095 PF13817 IS66 C-terminal element EA743_012095 PF03050 Transposase IS66 family EA743_012095 PF13007 Transposase C of IS166 homeodomain EA743_012095 PF13005 zinc-finger binding domain of transposase IS66 EA743_012140 PF01695 IstB-like ATP binding protein EA743_012150 PF00145 C-5 cytosine-specific DNA methylase EA743_012235 PF00929 Exonuclease EA743_012285 PF01645 Conserved region in glutamate synthase EA743_012300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EA743_012300 PF01565 FAD binding domain EA743_012305 PF01451 Low molecular weight phosphotyrosine protein phosphatase EA743_012315 PF00465 Iron-containing alcohol dehydrogenase EA743_012320 PF03061 Thioesterase superfamily EA743_012325 PF05506 Domain of unknown function (DUF756) EA743_012325 PF04185 Phosphoesterase family EA743_012330 PF12170 DNA polymerase III tau subunit V interacting with alpha EA743_012330 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EA743_012330 PF12169 DNA polymerase III subunits gamma and tau domain III EA743_012335 PF07690 Major Facilitator Superfamily EA743_012360 PF02803 Thiolase, C-terminal domain EA743_012360 PF00108 Thiolase, N-terminal domain EA743_012370 PF03466 LysR substrate binding domain EA743_012370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_012385 PF03050 Transposase IS66 family EA743_012385 PF13817 IS66 C-terminal element EA743_012385 PF13007 Transposase C of IS166 homeodomain EA743_012385 PF13005 zinc-finger binding domain of transposase IS66 EA743_012405 PF01037 Lrp/AsnC ligand binding domain EA743_012410 PF03594 Benzoate membrane transport protein EA743_012415 PF02308 MgtC family EA743_012420 PF00689 Cation transporting ATPase, C-terminus EA743_012420 PF00690 Cation transporter/ATPase, N-terminus EA743_012435 PF00582 Universal stress protein family EA743_012440 PF12848 ABC transporter EA743_012440 PF00005 ABC transporter EA743_012460 PF07715 TonB-dependent Receptor Plug Domain EA743_012460 PF00593 TonB dependent receptor EA743_012490 PF00924 Mechanosensitive ion channel EA743_012495 PF00593 TonB dependent receptor EA743_012495 PF07715 TonB-dependent Receptor Plug Domain EA743_012500 PF00440 Bacterial regulatory proteins, tetR family EA743_012520 PF01037 Lrp/AsnC ligand binding domain EA743_012525 PF01817 Chorismate mutase type II EA743_012550 PF00577 Outer membrane usher protein EA743_012550 PF13954 PapC N-terminal domain EA743_012550 PF13953 PapC C-terminal domain EA743_012565 PF01433 Peptidase family M1 domain EA743_012565 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EA743_012565 PF11940 Domain of unknown function (DUF3458) Ig-like fold EA743_012580 PF02110 Hydroxyethylthiazole kinase family EA743_012585 PF06445 GyrI-like small molecule binding domain EA743_012595 PF05970 PIF1-like helicase EA743_012595 PF14493 Helix-turn-helix domain EA743_012600 PF00465 Iron-containing alcohol dehydrogenase EA743_012615 PF00171 Aldehyde dehydrogenase family EA743_012620 PF13520 Amino acid permease EA743_012625 PF06751 Ethanolamine ammonia lyase large subunit (EutB) EA743_012630 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EA743_012635 PF02540 NAD synthase EA743_012635 PF00958 GMP synthase C terminal domain EA743_012635 PF00117 Glutamine amidotransferase class-I EA743_012640 PF00749 tRNA synthetases class I (E and Q), catalytic domain EA743_012640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EA743_012645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EA743_012650 PF00149 Calcineurin-like phosphoesterase EA743_012660 PF00881 Nitroreductase family EA743_012670 PF17209 Hfq protein EA743_012680 PF01119 DNA mismatch repair protein, C-terminal domain EA743_012680 PF08676 MutL C terminal dimerisation domain EA743_012685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EA743_012690 PF01479 S4 domain EA743_012690 PF00849 RNA pseudouridylate synthase EA743_012705 PF00849 RNA pseudouridylate synthase EA743_012705 PF01479 S4 domain EA743_012715 PF04284 Protein of unknown function (DUF441) EA743_012720 PF03466 LysR substrate binding domain EA743_012720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_012735 PF07690 Major Facilitator Superfamily EA743_012740 PF00520 Ion transport protein EA743_012740 PF00027 Cyclic nucleotide-binding domain EA743_012750 PF11791 Aconitate B N-terminal domain EA743_012750 PF06434 Aconitate hydratase 2 N-terminus EA743_012750 PF00330 Aconitase family (aconitate hydratase) EA743_012770 PF01103 Surface antigen EA743_012770 PF07244 Surface antigen variable number repeat EA743_012770 PF17243 POTRA domain TamA domain 1 EA743_012775 PF07690 Major Facilitator Superfamily EA743_012780 PF03232 Ubiquinone biosynthesis protein COQ7 EA743_012790 PF00120 Glutamine synthetase, catalytic domain EA743_012795 PF00072 Response regulator receiver domain EA743_012795 PF00486 Transcriptional regulatory protein, C terminal EA743_012800 PF02702 Osmosensitive K+ channel His kinase sensor domain EA743_012800 PF13493 Domain of unknown function (DUF4118) EA743_012800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_012800 PF00512 His Kinase A (phospho-acceptor) domain EA743_012805 PF02669 K+-transporting ATPase, c chain EA743_012815 PF03814 Potassium-transporting ATPase A subunit EA743_012825 PF02152 Dihydroneopterin aldolase EA743_012830 PF03109 ABC1 family EA743_012835 PF00899 ThiF family EA743_012840 PF01613 Flavin reductase like domain EA743_012845 PF00501 AMP-binding enzyme EA743_012845 PF13193 AMP-binding enzyme C-terminal domain EA743_012850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_012850 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_012850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_012855 PF00106 short chain dehydrogenase EA743_012860 PF12833 Helix-turn-helix domain EA743_012865 PF13847 Methyltransferase domain EA743_012865 PF17827 PrmC N-terminal domain EA743_012870 PF03462 PCRF domain EA743_012870 PF00472 RF-1 domain EA743_012880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_012880 PF03466 LysR substrate binding domain EA743_012900 PF00296 Luciferase-like monooxygenase EA743_012910 PF13994 PgaD-like protein EA743_012915 PF00535 Glycosyl transferase family 2 EA743_012920 PF14883 Hypothetical glycosyl hydrolase family 13 EA743_012920 PF01522 Polysaccharide deacetylase EA743_012930 PF03618 Kinase/pyrophosphorylase EA743_012935 PF00391 PEP-utilising enzyme, mobile domain EA743_012935 PF02896 PEP-utilising enzyme, TIM barrel domain EA743_012935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EA743_012945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EA743_012945 PF06481 COX Aromatic Rich Motif EA743_012950 PF00115 Cytochrome C and Quinol oxidase polypeptide I EA743_012955 PF00510 Cytochrome c oxidase subunit III EA743_012960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EA743_012965 PF01040 UbiA prenyltransferase family EA743_012970 PF01250 Ribosomal protein S6 EA743_012975 PF01084 Ribosomal protein S18 EA743_012980 PF03948 Ribosomal protein L9, C-terminal domain EA743_012980 PF01281 Ribosomal protein L9, N-terminal domain EA743_012985 PF00772 DnaB-like helicase N terminal domain EA743_012985 PF03796 DnaB-like helicase C terminal domain EA743_012990 PF01168 Alanine racemase, N-terminal domain EA743_012990 PF00842 Alanine racemase, C-terminal domain EA743_013000 PF01841 Transglutaminase-like superfamily EA743_013000 PF08379 Bacterial transglutaminase-like N-terminal region EA743_013010 PF14403 Circularly permuted ATP-grasp type 2 EA743_013020 PF01134 Glucose inhibited division protein A EA743_013020 PF13932 GidA associated domain EA743_013040 PF02954 Bacterial regulatory protein, Fis family EA743_013045 PF01808 AICARFT/IMPCHase bienzyme EA743_013045 PF02142 MGS-like domain EA743_013050 PF02843 Phosphoribosylglycinamide synthetase, C domain EA743_013050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EA743_013050 PF02844 Phosphoribosylglycinamide synthetase, N domain EA743_013055 PF03180 NLPA lipoprotein EA743_013060 PF09383 NIL domain EA743_013060 PF00005 ABC transporter EA743_013065 PF00528 Binding-protein-dependent transport system inner membrane component EA743_013070 PF16123 Hydroxyacylglutathione hydrolase C-terminus EA743_013070 PF00753 Metallo-beta-lactamase superfamily EA743_013080 PF00375 Sodium:dicarboxylate symporter family EA743_013100 PF07995 Glucose / Sorbosone dehydrogenase EA743_013110 PF00892 EamA-like transporter family EA743_013115 PF01177 Asp/Glu/Hydantoin racemase EA743_013125 PF02470 MlaD protein EA743_013130 PF04403 Paraquat-inducible protein A EA743_013160 PF00293 NUDIX domain EA743_013165 PF00083 Sugar (and other) transporter EA743_013165 PF08946 Osmosensory transporter coiled coil EA743_013215 PF00392 Bacterial regulatory proteins, gntR family EA743_013215 PF07729 FCD domain EA743_013225 PF03616 Sodium/glutamate symporter EA743_013230 PF00561 alpha/beta hydrolase fold EA743_013255 PF04076 Bacterial OB fold (BOF) protein EA743_013285 PF00324 Amino acid permease EA743_013290 PF00171 Aldehyde dehydrogenase family EA743_013310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_013310 PF03466 LysR substrate binding domain EA743_013355 PF17287 POTRA domain EA743_013355 PF08479 POTRA domain, ShlB-type EA743_013355 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EA743_013380 PF00069 Protein kinase domain EA743_013380 PF03793 PASTA domain EA743_013400 PF00814 Glycoprotease family EA743_013405 PF01165 Ribosomal protein S21 EA743_013410 PF09424 Yqey-like protein EA743_013415 PF01435 Peptidase family M48 EA743_013420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EA743_013420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EA743_013435 PF00156 Phosphoribosyl transferase domain EA743_013440 PF02674 Colicin V production protein EA743_013445 PF01180 Dihydroorotate dehydrogenase EA743_013465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EA743_013465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EA743_013470 PF00881 Nitroreductase family EA743_013480 PF00270 DEAD/DEAH box helicase EA743_013480 PF00271 Helicase conserved C-terminal domain EA743_013485 PF00313 'Cold-shock' DNA-binding domain EA743_013495 PF00140 Sigma-70 factor, region 1.2 EA743_013495 PF04542 Sigma-70 region 2 EA743_013495 PF04545 Sigma-70, region 4 EA743_013500 PF04241 Protein of unknown function (DUF423) EA743_013510 PF05690 Thiazole biosynthesis protein ThiG EA743_013520 PF03883 Peroxide stress protein YaaA EA743_013530 PF00753 Metallo-beta-lactamase superfamily EA743_013535 PF01546 Peptidase family M20/M25/M40 EA743_013535 PF07687 Peptidase dimerisation domain EA743_013545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EA743_013550 PF01842 ACT domain EA743_013550 PF01817 Chorismate mutase type II EA743_013550 PF00800 Prephenate dehydratase EA743_013555 PF00756 Putative esterase EA743_013560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_013560 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_013560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_013565 PF00375 Sodium:dicarboxylate symporter family EA743_013575 PF00591 Glycosyl transferase family, a/b domain EA743_013575 PF02885 Glycosyl transferase family, helical bundle domain EA743_013580 PF07023 Protein of unknown function (DUF1315) EA743_013585 PF01513 ATP-NAD kinase EA743_013590 PF00905 Penicillin binding protein transpeptidase domain EA743_013590 PF00912 Transglycosylase EA743_013590 PF14814 Bifunctional transglycosylase second domain EA743_013600 PF00293 NUDIX domain EA743_013610 PF08521 Two-component sensor kinase N-terminal EA743_013610 PF00512 His Kinase A (phospho-acceptor) domain EA743_013610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_013615 PF00486 Transcriptional regulatory protein, C terminal EA743_013615 PF00072 Response regulator receiver domain EA743_013625 PF00437 Type II/IV secretion system protein EA743_013635 PF01980 tRNA-methyltransferase O EA743_013635 PF18389 TrmO C-terminal domain EA743_013640 PF00175 Oxidoreductase NAD-binding domain EA743_013640 PF00970 Oxidoreductase FAD-binding domain EA743_013645 PF02567 Phenazine biosynthesis-like protein EA743_013650 PF00155 Aminotransferase class I and II EA743_013650 PF00392 Bacterial regulatory proteins, gntR family EA743_013660 PF00037 4Fe-4S binding domain EA743_013665 PF00893 Small Multidrug Resistance protein EA743_013670 PF00005 ABC transporter EA743_013675 PF00528 Binding-protein-dependent transport system inner membrane component EA743_013680 PF00528 Binding-protein-dependent transport system inner membrane component EA743_013685 PF00497 Bacterial extracellular solute-binding proteins, family 3 EA743_013690 PF03466 LysR substrate binding domain EA743_013690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_013695 PF13533 Biotin-lipoyl like EA743_013700 PF00873 AcrB/AcrD/AcrF family EA743_013705 PF02321 Outer membrane efflux protein EA743_013710 PF00464 Serine hydroxymethyltransferase EA743_013740 PF00005 ABC transporter EA743_013745 PF01061 ABC-2 type transporter EA743_013750 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EA743_013750 PF14489 QueF-like protein EA743_013760 PF01098 Cell cycle protein EA743_013765 PF13406 Transglycosylase SLT domain EA743_013770 PF05036 Sporulation related domain EA743_013770 PF03330 Lytic transglycolase EA743_013790 PF12833 Helix-turn-helix domain EA743_013800 PF00889 Elongation factor TS EA743_013805 PF00318 Ribosomal protein S2 EA743_013810 PF00557 Metallopeptidase family M24 EA743_013820 PF07690 Major Facilitator Superfamily EA743_013830 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_013830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EA743_013835 PF04055 Radical SAM superfamily EA743_013840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_013840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_013840 PF09317 Domain of unknown function (DUF1974) EA743_013855 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EA743_013855 PF05221 S-adenosyl-L-homocysteine hydrolase EA743_013860 PF02219 Methylenetetrahydrofolate reductase EA743_013865 PF04452 RNA methyltransferase EA743_013870 PF03707 Bacterial signalling protein N terminal repeat EA743_013870 PF00563 EAL domain EA743_013870 PF00990 Diguanylate cyclase, GGDEF domain EA743_013875 PF03949 Malic enzyme, NAD binding domain EA743_013875 PF01515 Phosphate acetyl/butaryl transferase EA743_013875 PF00390 Malic enzyme, N-terminal domain EA743_013880 PF12627 Probable RNA and SrmB- binding site of polymerase A EA743_013880 PF01743 Poly A polymerase head domain EA743_013885 PF13180 PDZ domain EA743_013890 PF01784 NIF3 (NGG1p interacting factor 3) EA743_013895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EA743_013895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EA743_013930 PF01040 UbiA prenyltransferase family EA743_013935 PF04345 Chorismate lyase EA743_013945 PF00854 POT family EA743_013955 PF13356 Arm DNA-binding domain EA743_013955 PF00589 Phage integrase family EA743_014335 PF01812 5-formyltetrahydrofolate cyclo-ligase family EA743_014345 PF13018 Extended Signal Peptide of Type V secretion system EA743_014345 PF03895 YadA-like membrane anchor domain EA743_014345 PF05658 Head domain of trimeric autotransporter adhesin EA743_014345 PF05662 Coiled stalk of trimeric autotransporter adhesin EA743_014350 PF02190 ATP-dependent protease La (LON) substrate-binding domain EA743_014350 PF00004 ATPase family associated with various cellular activities (AAA) EA743_014350 PF05362 Lon protease (S16) C-terminal proteolytic domain EA743_014355 PF02590 Predicted SPOUT methyltransferase EA743_014360 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EA743_014370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EA743_014370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EA743_014375 PF04060 Putative Fe-S cluster EA743_014380 PF10576 Iron-sulfur binding domain of endonuclease III EA743_014380 PF00633 Helix-hairpin-helix motif EA743_014380 PF00730 HhH-GPD superfamily base excision DNA repair protein EA743_014390 PF05191 Adenylate kinase, active site lid EA743_014405 PF00905 Penicillin binding protein transpeptidase domain EA743_014405 PF03717 Penicillin-binding Protein dimerisation domain EA743_014420 PF02492 CobW/HypB/UreG, nucleotide-binding domain EA743_014425 PF01730 UreF EA743_014430 PF05194 UreE urease accessory protein, C-terminal domain EA743_014430 PF02814 UreE urease accessory protein, N-terminal domain EA743_014435 PF01979 Amidohydrolase family EA743_014435 PF00449 Urease alpha-subunit, N-terminal domain EA743_014440 PF00699 Urease beta subunit EA743_014445 PF00547 Urease, gamma subunit EA743_014450 PF01774 UreD urease accessory protein EA743_014465 PF00463 Isocitrate lyase family EA743_014470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_014470 PF03466 LysR substrate binding domain EA743_014475 PF03471 Transporter associated domain EA743_014475 PF01595 Cyclin M transmembrane N-terminal domain EA743_014475 PF00571 CBS domain EA743_014485 PF03600 Citrate transporter EA743_014500 PF00009 Elongation factor Tu GTP binding domain EA743_014505 PF01507 Phosphoadenosine phosphosulfate reductase family EA743_014515 PF14052 Capsule assembly protein Wzi EA743_014520 PF01336 OB-fold nucleic acid binding domain EA743_014520 PF00152 tRNA synthetases class II (D, K and N) EA743_014535 PF00301 Rubredoxin EA743_014540 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_014540 PF18113 Rubredoxin binding C-terminal domain EA743_014545 PF00561 alpha/beta hydrolase fold EA743_014550 PF03466 LysR substrate binding domain EA743_014550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_014565 PF17941 Polyphosphate kinase C-terminal domain 1 EA743_014565 PF13090 Polyphosphate kinase C-terminal domain 2 EA743_014565 PF02503 Polyphosphate kinase middle domain EA743_014565 PF13089 Polyphosphate kinase N-terminal domain EA743_014570 PF00912 Transglycosylase EA743_014575 PF01694 Rhomboid family EA743_014585 PF00005 ABC transporter EA743_014590 PF13472 GDSL-like Lipase/Acylhydrolase family EA743_014595 PF00484 Carbonic anhydrase EA743_014600 PF00561 alpha/beta hydrolase fold EA743_014615 PF01521 Iron-sulphur cluster biosynthesis EA743_014615 PF01106 NifU-like domain EA743_014625 PF00884 Sulfatase EA743_014630 PF03781 Sulfatase-modifying factor enzyme 1 EA743_014645 PF00291 Pyridoxal-phosphate dependent enzyme EA743_014650 PF01384 Phosphate transporter family EA743_014655 PF02310 B12 binding domain EA743_014655 PF00809 Pterin binding enzyme EA743_014655 PF02574 Homocysteine S-methyltransferase EA743_014655 PF02965 Vitamin B12 dependent methionine synthase, activation domain EA743_014655 PF02607 B12 binding domain EA743_014660 PF02779 Transketolase, pyrimidine binding domain EA743_014660 PF02780 Transketolase, C-terminal domain EA743_014665 PF00456 Transketolase, thiamine diphosphate binding domain EA743_014670 PF07690 Major Facilitator Superfamily EA743_014680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_014680 PF03466 LysR substrate binding domain EA743_014695 PF01263 Aldose 1-epimerase EA743_014700 PF07690 Major Facilitator Superfamily EA743_014705 PF02311 AraC-like ligand binding domain EA743_014705 PF12833 Helix-turn-helix domain EA743_014710 PF04960 Glutaminase EA743_014715 PF01327 Polypeptide deformylase EA743_014720 PF07690 Major Facilitator Superfamily EA743_014730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EA743_014730 PF00205 Thiamine pyrophosphate enzyme, central domain EA743_014730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EA743_014735 PF00171 Aldehyde dehydrogenase family EA743_014740 PF03447 Homoserine dehydrogenase, NAD binding domain EA743_014740 PF01958 Domain of unknown function DUF108 EA743_014750 PF12697 Alpha/beta hydrolase family EA743_014760 PF07690 Major Facilitator Superfamily EA743_014765 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_014765 PF14759 Reductase C-terminal EA743_014770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EA743_014780 PF00355 Rieske [2Fe-2S] domain EA743_014790 PF00355 Rieske [2Fe-2S] domain EA743_014795 PF01614 Bacterial transcriptional regulator EA743_014795 PF09339 IclR helix-turn-helix domain EA743_014810 PF00378 Enoyl-CoA hydratase/isomerase EA743_014820 PF00535 Glycosyl transferase family 2 EA743_014825 PF14883 Hypothetical glycosyl hydrolase family 13 EA743_014825 PF01522 Polysaccharide deacetylase EA743_014830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA743_014835 PF07152 YaeQ protein EA743_014840 PF00375 Sodium:dicarboxylate symporter family EA743_014845 PF02492 CobW/HypB/UreG, nucleotide-binding domain EA743_014845 PF07683 Cobalamin synthesis protein cobW C-terminal domain EA743_014855 PF03061 Thioesterase superfamily EA743_014865 PF02028 BCCT, betaine/carnitine/choline family transporter EA743_014870 PF02028 BCCT, betaine/carnitine/choline family transporter EA743_014875 PF00440 Bacterial regulatory proteins, tetR family EA743_014875 PF13977 BetI-type transcriptional repressor, C-terminal EA743_014880 PF00171 Aldehyde dehydrogenase family EA743_014885 PF00732 GMC oxidoreductase EA743_014885 PF05199 GMC oxidoreductase EA743_014890 PF06039 Malate:quinone oxidoreductase (Mqo) EA743_014900 PF02574 Homocysteine S-methyltransferase EA743_014905 PF13520 Amino acid permease EA743_014955 PF00083 Sugar (and other) transporter EA743_014985 PF12161 HsdM N-terminal domain EA743_014985 PF02384 N-6 DNA Methylase EA743_014990 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EA743_014990 PF18766 SWI2/SNF2 ATPase EA743_014990 PF11867 Domain of unknown function (DUF3387) EA743_015005 PF02384 N-6 DNA Methylase EA743_015020 PF03050 Transposase IS66 family EA743_015020 PF13005 zinc-finger binding domain of transposase IS66 EA743_015020 PF13007 Transposase C of IS166 homeodomain EA743_015020 PF13817 IS66 C-terminal element EA743_015065 PF00436 Single-strand binding protein family EA743_015110 PF00589 Phage integrase family EA743_015110 PF13356 Arm DNA-binding domain EA743_015125 PF07690 Major Facilitator Superfamily EA743_015130 PF13533 Biotin-lipoyl like EA743_015135 PF03061 Thioesterase superfamily EA743_015140 PF00490 Delta-aminolevulinic acid dehydratase EA743_015145 PF01266 FAD dependent oxidoreductase EA743_015150 PF08338 Domain of unknown function (DUF1731) EA743_015150 PF01370 NAD dependent epimerase/dehydratase family EA743_015170 PF00149 Calcineurin-like phosphoesterase EA743_015170 PF12320 Type 5 capsule protein repressor C-terminal domain EA743_015180 PF01168 Alanine racemase, N-terminal domain EA743_015185 PF00437 Type II/IV secretion system protein EA743_015190 PF00437 Type II/IV secretion system protein EA743_015195 PF01475 Ferric uptake regulator family EA743_015200 PF04355 SmpA / OmlA family EA743_015205 PF03658 RnfH family Ubiquitin EA743_015220 PF01814 Hemerythrin HHE cation binding domain EA743_015225 PF13230 Glutamine amidotransferases class-II EA743_015235 PF00696 Amino acid kinase family EA743_015240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EA743_015240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EA743_015240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EA743_015240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EA743_015245 PF00692 dUTPase EA743_015250 PF13361 UvrD-like helicase C-terminal domain EA743_015250 PF00580 UvrD/REP helicase N-terminal domain EA743_015255 PF00691 OmpA family EA743_015255 PF13488 Glycine zipper EA743_015260 PF01553 Acyltransferase EA743_015270 PF03775 Septum formation inhibitor MinC, C-terminal domain EA743_015275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EA743_015280 PF03776 Septum formation topological specificity factor MinE EA743_015290 PF01810 LysE type translocator EA743_015295 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EA743_015295 PF17854 FtsK alpha domain EA743_015295 PF09397 Ftsk gamma domain EA743_015295 PF01580 FtsK/SpoIIIE family EA743_015300 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA743_015305 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EA743_015310 PF04376 Arginine-tRNA-protein transferase, N terminus EA743_015310 PF04377 Arginine-tRNA-protein transferase, C terminus EA743_015315 PF00583 Acetyltransferase (GNAT) family EA743_015330 PF00009 Elongation factor Tu GTP binding domain EA743_015330 PF03143 Elongation factor Tu C-terminal domain EA743_015330 PF03144 Elongation factor Tu domain 2 EA743_015335 PF00679 Elongation factor G C-terminus EA743_015335 PF14492 Elongation Factor G, domain II EA743_015335 PF03144 Elongation factor Tu domain 2 EA743_015335 PF00009 Elongation factor Tu GTP binding domain EA743_015335 PF03764 Elongation factor G, domain IV EA743_015340 PF00177 Ribosomal protein S7p/S5e EA743_015345 PF00164 Ribosomal protein S12/S23 EA743_015355 PF02801 Beta-ketoacyl synthase, C-terminal domain EA743_015355 PF00109 Beta-ketoacyl synthase, N-terminal domain EA743_015365 PF05726 Pirin C-terminal cupin domain EA743_015365 PF02678 Pirin EA743_015375 PF00795 Carbon-nitrogen hydrolase EA743_015375 PF02540 NAD synthase EA743_015390 PF00175 Oxidoreductase NAD-binding domain EA743_015390 PF00111 2Fe-2S iron-sulfur cluster binding domain EA743_015390 PF00970 Oxidoreductase FAD-binding domain EA743_015395 PF00171 Aldehyde dehydrogenase family EA743_015400 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EA743_015400 PF00355 Rieske [2Fe-2S] domain EA743_015405 PF07859 alpha/beta hydrolase fold EA743_015410 PF02028 BCCT, betaine/carnitine/choline family transporter EA743_015415 PF00180 Isocitrate/isopropylmalate dehydrogenase EA743_015420 PF03466 LysR substrate binding domain EA743_015420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_015440 PF00037 4Fe-4S binding domain EA743_015445 PF01467 Cytidylyltransferase-like EA743_015450 PF01668 SmpB protein EA743_015455 PF03358 NADPH-dependent FMN reductase EA743_015465 PF00849 RNA pseudouridylate synthase EA743_015465 PF01479 S4 domain EA743_015470 PF13525 Outer membrane lipoprotein EA743_015475 PF01807 CHC2 zinc finger EA743_015475 PF08275 DNA primase catalytic core, N-terminal domain EA743_015475 PF10410 DnaB-helicase binding domain of primase EA743_015475 PF08278 DNA primase DnaG DnaB-binding EA743_015480 PF01488 Shikimate / quinate 5-dehydrogenase EA743_015480 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EA743_015480 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EA743_015490 PF03550 Outer membrane lipoprotein LolB EA743_015495 PF08544 GHMP kinases C terminal EA743_015495 PF00288 GHMP kinases N terminal domain EA743_015520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EA743_015520 PF14572 Phosphoribosyl synthetase-associated domain EA743_015525 PF01386 Ribosomal L25p family EA743_015530 PF01195 Peptidyl-tRNA hydrolase EA743_015535 PF02261 Aspartate decarboxylase EA743_015550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EA743_015560 PF03070 TENA/THI-4/PQQC family EA743_015560 PF08543 Phosphomethylpyrimidine kinase EA743_015560 PF02581 Thiamine monophosphate synthase EA743_015565 PF01476 LysM domain EA743_015565 PF04972 BON domain EA743_015570 PF00550 Phosphopantetheine attachment site EA743_015580 PF00698 Acyl transferase domain EA743_015585 PF01783 Ribosomal L32p protein family EA743_015590 PF02620 Large ribosomal RNA subunit accumulation protein YceD EA743_015595 PF04315 Elongation factor P hydroxylase EA743_015600 PF01300 Telomere recombination EA743_015605 PF02616 Segregation and condensation protein ScpA EA743_015610 PF04079 Segregation and condensation complex subunit ScpB EA743_015615 PF00849 RNA pseudouridylate synthase EA743_015615 PF01479 S4 domain EA743_015630 PF00155 Aminotransferase class I and II EA743_015635 PF00202 Aminotransferase class-III EA743_015635 PF06968 Biotin and Thiamin Synthesis associated domain EA743_015635 PF04055 Radical SAM superfamily EA743_015640 PF12697 Alpha/beta hydrolase family EA743_015640 PF08241 Methyltransferase domain EA743_015645 PF02358 Trehalose-phosphatase EA743_015650 PF00982 Glycosyltransferase family 20 EA743_015655 PF07690 Major Facilitator Superfamily EA743_015660 PF00210 Ferritin-like domain EA743_015665 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EA743_015665 PF03120 NAD-dependent DNA ligase OB-fold domain EA743_015665 PF01653 NAD-dependent DNA ligase adenylation domain EA743_015665 PF00533 BRCA1 C Terminus (BRCT) domain EA743_015665 PF12826 Helix-hairpin-helix motif EA743_015675 PF06470 SMC proteins Flexible Hinge Domain EA743_015675 PF02463 RecF/RecN/SMC N terminal domain EA743_015685 PF01925 Sulfite exporter TauE/SafE EA743_015695 PF03309 Type III pantothenate kinase EA743_015700 PF00448 SRP54-type protein, GTPase domain EA743_015700 PF02881 SRP54-type protein, helical bundle domain EA743_015700 PF02978 Signal peptide binding domain EA743_015710 PF01207 Dihydrouridine synthase (Dus) EA743_015745 PF00692 dUTPase EA743_015760 PF01048 Phosphorylase superfamily EA743_015770 PF10609 NUBPL iron-transfer P-loop NTPase EA743_015780 PF09334 tRNA synthetases class I (M) EA743_015780 PF01588 Putative tRNA binding domain EA743_015805 PF13533 Biotin-lipoyl like EA743_015810 PF00291 Pyridoxal-phosphate dependent enzyme EA743_015825 PF05552 Conserved TM helix EA743_015840 PF00970 Oxidoreductase FAD-binding domain EA743_015840 PF00175 Oxidoreductase NAD-binding domain EA743_015845 PF03466 LysR substrate binding domain EA743_015845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_015855 PF00313 'Cold-shock' DNA-binding domain EA743_015865 PF00361 Proton-conducting membrane transporter EA743_015870 PF00361 Proton-conducting membrane transporter EA743_015875 PF00361 Proton-conducting membrane transporter EA743_015875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EA743_015880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EA743_015885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EA743_015890 PF12838 4Fe-4S dicluster domain EA743_015895 PF00146 NADH dehydrogenase EA743_015900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EA743_015900 PF00384 Molybdopterin oxidoreductase EA743_015900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EA743_015905 PF10531 SLBB domain EA743_015905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EA743_015905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EA743_015915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EA743_015915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EA743_015920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EA743_015925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EA743_015930 PF00990 Diguanylate cyclase, GGDEF domain EA743_015930 PF17158 Membrane-associated sensor, integral membrane domain EA743_015940 PF00512 His Kinase A (phospho-acceptor) domain EA743_015940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_015940 PF00672 HAMP domain EA743_015945 PF00486 Transcriptional regulatory protein, C terminal EA743_015945 PF00072 Response regulator receiver domain EA743_015955 PF02867 Ribonucleotide reductase, barrel domain EA743_015955 PF03477 ATP cone domain EA743_015955 PF00317 Ribonucleotide reductase, all-alpha domain EA743_015965 PF00268 Ribonucleotide reductase, small chain EA743_015980 PF17074 Darcynin, domain of unknown function EA743_016020 PF01613 Flavin reductase like domain EA743_016025 PF08267 Cobalamin-independent synthase, N-terminal domain EA743_016025 PF01717 Cobalamin-independent synthase, Catalytic domain EA743_016035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_016035 PF03466 LysR substrate binding domain EA743_016040 PF01810 LysE type translocator EA743_016045 PF03466 LysR substrate binding domain EA743_016045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_016055 PF07690 Major Facilitator Superfamily EA743_016065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_016065 PF03466 LysR substrate binding domain EA743_016070 PF14537 Cytochrome c3 EA743_016070 PF00890 FAD binding domain EA743_016085 PF17932 Tetracyclin repressor-like, C-terminal domain EA743_016085 PF00440 Bacterial regulatory proteins, tetR family EA743_016090 PF02515 CoA-transferase family III EA743_016095 PF07690 Major Facilitator Superfamily EA743_016100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_016100 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_016100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_016105 PF03466 LysR substrate binding domain EA743_016105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_016110 PF08240 Alcohol dehydrogenase GroES-like domain EA743_016110 PF00107 Zinc-binding dehydrogenase EA743_016115 PF00962 Adenosine/AMP deaminase EA743_016140 PF02445 Quinolinate synthetase A protein EA743_016145 PF01960 ArgJ family EA743_016150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EA743_016150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EA743_016155 PF00893 Small Multidrug Resistance protein EA743_016170 PF07732 Multicopper oxidase EA743_016170 PF07731 Multicopper oxidase EA743_016170 PF00394 Multicopper oxidase EA743_016185 PF00834 Ribulose-phosphate 3 epimerase family EA743_016195 PF00756 Putative esterase EA743_016205 PF04445 Putative SAM-dependent methyltransferase EA743_016210 PF00814 Glycoprotease family EA743_016215 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_016220 PF00293 NUDIX domain EA743_016240 PF13817 IS66 C-terminal element EA743_016240 PF03050 Transposase IS66 family EA743_016240 PF13007 Transposase C of IS166 homeodomain EA743_016240 PF13005 zinc-finger binding domain of transposase IS66 EA743_016280 PF00425 chorismate binding enzyme EA743_016280 PF04715 Anthranilate synthase component I, N terminal region EA743_016285 PF00155 Aminotransferase class I and II EA743_016290 PF00815 Histidinol dehydrogenase EA743_016295 PF01634 ATP phosphoribosyltransferase EA743_016300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EA743_016305 PF01722 BolA-like protein EA743_016310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EA743_016315 PF04552 Sigma-54, DNA binding domain EA743_016315 PF00309 Sigma-54 factor, Activator interacting domain (AID) EA743_016315 PF04963 Sigma-54 factor, core binding domain EA743_016360 PF00795 Carbon-nitrogen hydrolase EA743_016370 PF01047 MarR family EA743_016375 PF02566 OsmC-like protein EA743_016380 PF00437 Type II/IV secretion system protein EA743_016400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EA743_016400 PF00476 DNA polymerase family A EA743_016400 PF01612 3'-5' exonuclease EA743_016400 PF01367 5'-3' exonuclease, C-terminal SAM fold EA743_016405 PF02325 YGGT family EA743_016410 PF03807 NADP oxidoreductase coenzyme F420-dependent EA743_016410 PF14748 Pyrroline-5-carboxylate reductase dimerisation EA743_016415 PF11734 TilS substrate C-terminal domain EA743_016415 PF09179 TilS substrate binding domain EA743_016415 PF01171 PP-loop family EA743_016420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EA743_016425 PF02541 Ppx/GppA phosphatase family EA743_016430 PF00085 Thioredoxin EA743_016435 PF07498 Rho termination factor, N-terminal domain EA743_016435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EA743_016435 PF07497 Rho termination factor, RNA-binding domain EA743_016450 PF00216 Bacterial DNA-binding protein EA743_016455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EA743_016455 PF01588 Putative tRNA binding domain EA743_016455 PF03147 Ferredoxin-fold anticodon binding domain EA743_016455 PF03484 tRNA synthetase B5 domain EA743_016455 PF03483 B3/4 domain EA743_016460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EA743_016460 PF01409 tRNA synthetases class II core domain (F) EA743_016480 PF00453 Ribosomal protein L20 EA743_016485 PF01632 Ribosomal protein L35 EA743_016490 PF07690 Major Facilitator Superfamily EA743_016495 PF09335 SNARE associated Golgi protein EA743_016500 PF00043 Glutathione S-transferase, C-terminal domain EA743_016500 PF02798 Glutathione S-transferase, N-terminal domain EA743_016510 PF05198 Translation initiation factor IF-3, N-terminal domain EA743_016510 PF00707 Translation initiation factor IF-3, C-terminal domain EA743_016515 PF03129 Anticodon binding domain EA743_016515 PF02824 TGS domain EA743_016515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EA743_016515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EA743_016520 PF00501 AMP-binding enzyme EA743_016520 PF13193 AMP-binding enzyme C-terminal domain EA743_016525 PF04751 Protein of unknown function (DUF615) EA743_016530 PF00381 PTS HPr component phosphorylation site EA743_016535 PF03668 P-loop ATPase protein family EA743_016540 PF02569 Pantoate-beta-alanine ligase EA743_016545 PF02548 Ketopantoate hydroxymethyltransferase EA743_016550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EA743_016555 PF12627 Probable RNA and SrmB- binding site of polymerase A EA743_016555 PF12626 Polymerase A arginine-rich C-terminus EA743_016555 PF01743 Poly A polymerase head domain EA743_016565 PF03819 MazG nucleotide pyrophosphohydrolase domain EA743_016575 PF13291 ACT domain EA743_016575 PF04607 Region found in RelA / SpoT proteins EA743_016575 PF02824 TGS domain EA743_016580 PF05958 tRNA (Uracil-5-)-methyltransferase EA743_016590 PF00291 Pyridoxal-phosphate dependent enzyme EA743_016595 PF00672 HAMP domain EA743_016595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_016595 PF00512 His Kinase A (phospho-acceptor) domain EA743_016595 PF01627 Hpt domain EA743_016595 PF00072 Response regulator receiver domain EA743_016595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EA743_016600 PF00378 Enoyl-CoA hydratase/isomerase EA743_016605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EA743_016605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EA743_016610 PF01261 Xylose isomerase-like TIM barrel EA743_016620 PF00106 short chain dehydrogenase EA743_016625 PF02233 NAD(P) transhydrogenase beta subunit EA743_016630 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EA743_016635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EA743_016635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EA743_016640 PF00892 EamA-like transporter family EA743_016650 PF07690 Major Facilitator Superfamily EA743_016655 PF01207 Dihydrouridine synthase (Dus) EA743_016665 PF03466 LysR substrate binding domain EA743_016665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_016675 PF00899 ThiF family EA743_016680 PF00330 Aconitase family (aconitate hydratase) EA743_016680 PF00694 Aconitase C-terminal domain EA743_016685 PF01026 TatD related DNase EA743_016700 PF16658 Class II release factor RF3, C-terminal domain EA743_016700 PF00009 Elongation factor Tu GTP binding domain EA743_016700 PF03144 Elongation factor Tu domain 2 EA743_016725 PF03707 Bacterial signalling protein N terminal repeat EA743_016725 PF00990 Diguanylate cyclase, GGDEF domain EA743_016725 PF00563 EAL domain EA743_016730 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EA743_016730 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EA743_016735 PF10369 Small subunit of acetolactate synthase EA743_016740 PF00205 Thiamine pyrophosphate enzyme, central domain EA743_016740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EA743_016740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EA743_016755 PF09334 tRNA synthetases class I (M) EA743_016755 PF08264 Anticodon-binding domain of tRNA EA743_016755 PF00133 tRNA synthetases class I (I, L, M and V) EA743_016755 PF13603 Leucyl-tRNA synthetase, Domain 2 EA743_016770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA743_016775 PF02687 FtsX-like permease family EA743_016775 PF12704 MacB-like periplasmic core domain EA743_016775 PF00005 ABC transporter EA743_016780 PF02321 Outer membrane efflux protein EA743_016795 PF00929 Exonuclease EA743_016800 PF03193 RsgA GTPase EA743_016810 PF00462 Glutaredoxin EA743_016815 PF02556 Preprotein translocase subunit SecB EA743_016825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EA743_016825 PF01926 50S ribosome-binding GTPase EA743_016830 PF13360 PQQ-like domain EA743_016840 PF13393 Histidyl-tRNA synthetase EA743_016840 PF03129 Anticodon binding domain EA743_016845 PF04551 GcpE protein EA743_016850 PF13464 Domain of unknown function (DUF4115) EA743_016860 PF04055 Radical SAM superfamily EA743_016865 PF00334 Nucleoside diphosphate kinase EA743_016870 PF04384 Iron-sulphur cluster assembly EA743_016875 PF01569 PAP2 superfamily EA743_016880 PF00534 Glycosyl transferases group 1 EA743_016880 PF13439 Glycosyltransferase Family 4 EA743_016885 PF03572 Peptidase family S41 EA743_016885 PF17804 Tail specific protease N-terminal domain EA743_016885 PF11818 C-terminal domain of tail specific protease (DUF3340) EA743_016885 PF00595 PDZ domain EA743_016890 PF00933 Glycosyl hydrolase family 3 N terminal domain EA743_016900 PF00561 alpha/beta hydrolase fold EA743_016905 PF00171 Aldehyde dehydrogenase family EA743_016910 PF00171 Aldehyde dehydrogenase family EA743_016915 PF01202 Shikimate kinase EA743_016920 PF02447 GntP family permease EA743_016925 PF01081 KDPG and KHG aldolase EA743_016930 PF00920 Dehydratase family EA743_016935 PF00871 Acetokinase family EA743_016940 PF01515 Phosphate acetyl/butaryl transferase EA743_016940 PF07085 DRTGG domain EA743_016945 PF05681 Fumarate hydratase (Fumerase) EA743_016945 PF05683 Fumarase C-terminus EA743_016960 PF07724 AAA domain (Cdc48 subfamily) EA743_016960 PF10431 C-terminal, D2-small domain, of ClpB protein EA743_016960 PF06689 ClpX C4-type zinc finger EA743_016965 PF00574 Clp protease EA743_016970 PF05697 Bacterial trigger factor protein (TF) EA743_016970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA743_016970 PF05698 Bacterial trigger factor protein (TF) C-terminus EA743_016975 PF07715 TonB-dependent Receptor Plug Domain EA743_016975 PF00593 TonB dependent receptor EA743_016980 PF18331 PKHD-type hydroxylase C-terminal domain EA743_016980 PF13640 2OG-Fe(II) oxygenase superfamily EA743_016985 PF00682 HMGL-like EA743_016985 PF08502 LeuA allosteric (dimerisation) domain EA743_016990 PF00561 alpha/beta hydrolase fold EA743_016995 PF00561 alpha/beta hydrolase fold EA743_016995 PF07021 Methionine biosynthesis protein MetW EA743_017005 PF01725 Ham1 family EA743_017015 PF02416 mttA/Hcf106 family EA743_017020 PF02416 mttA/Hcf106 family EA743_017025 PF00902 Sec-independent protein translocase protein (TatC) EA743_017045 PF01790 Prolipoprotein diacylglyceryl transferase EA743_017060 PF00303 Thymidylate synthase EA743_017065 PF00186 Dihydrofolate reductase EA743_017075 PF01625 Peptide methionine sulfoxide reductase EA743_017085 PF01618 MotA/TolQ/ExbB proton channel family EA743_017095 PF00551 Formyl transferase EA743_017095 PF01842 ACT domain EA743_017105 PF00171 Aldehyde dehydrogenase family EA743_017110 PF00830 Ribosomal L28 family EA743_017115 PF00471 Ribosomal protein L33 EA743_017120 PF00999 Sodium/hydrogen exchanger family EA743_017120 PF02254 TrkA-N domain EA743_017140 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EA743_017145 PF00580 UvrD/REP helicase N-terminal domain EA743_017145 PF13361 UvrD-like helicase C-terminal domain EA743_017160 PF01396 Topoisomerase DNA binding C4 zinc finger EA743_017160 PF08272 Topoisomerase I zinc-ribbon-like EA743_017160 PF01131 DNA topoisomerase EA743_017160 PF01751 Toprim domain EA743_017170 PF01638 HxlR-like helix-turn-helix EA743_017175 PF08240 Alcohol dehydrogenase GroES-like domain EA743_017175 PF00107 Zinc-binding dehydrogenase EA743_017190 PF01810 LysE type translocator EA743_017195 PF03279 Bacterial lipid A biosynthesis acyltransferase EA743_017205 PF00375 Sodium:dicarboxylate symporter family EA743_017215 PF01118 Semialdehyde dehydrogenase, NAD binding domain EA743_017215 PF02774 Semialdehyde dehydrogenase, dimerisation domain EA743_017235 PF01416 tRNA pseudouridine synthase EA743_017245 PF01176 Translation initiation factor 1A / IF-1 EA743_017260 PF00180 Isocitrate/isopropylmalate dehydrogenase EA743_017270 PF00694 Aconitase C-terminal domain EA743_017275 PF00330 Aconitase family (aconitate hydratase) EA743_017285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_017285 PF03466 LysR substrate binding domain EA743_017305 PF00293 NUDIX domain EA743_017310 PF02896 PEP-utilising enzyme, TIM barrel domain EA743_017310 PF01590 GAF domain EA743_017310 PF05524 PEP-utilising enzyme, N-terminal EA743_017310 PF00391 PEP-utilising enzyme, mobile domain EA743_017315 PF00141 Peroxidase EA743_017320 PF12706 Beta-lactamase superfamily domain EA743_017325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_017325 PF03466 LysR substrate binding domain EA743_017335 PF02798 Glutathione S-transferase, N-terminal domain EA743_017340 PF08279 HTH domain EA743_017340 PF13280 WYL domain EA743_017345 PF13419 Haloacid dehalogenase-like hydrolase EA743_017350 PF00849 RNA pseudouridylate synthase EA743_017350 PF01479 S4 domain EA743_017360 PF00575 S1 RNA binding domain EA743_017360 PF12111 Polyribonucleotide phosphorylase C terminal EA743_017360 PF10150 Ribonuclease E/G family EA743_017365 PF00501 AMP-binding enzyme EA743_017365 PF13193 AMP-binding enzyme C-terminal domain EA743_017380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EA743_017380 PF03466 LysR substrate binding domain EA743_017390 PF04055 Radical SAM superfamily EA743_017390 PF06969 HemN C-terminal domain EA743_017400 PF01554 MatE EA743_017405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_017405 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_017405 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EA743_017410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_017410 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EA743_017415 PF03109 ABC1 family EA743_017420 PF01197 Ribosomal protein L31 EA743_017425 PF03050 Transposase IS66 family EA743_017425 PF13817 IS66 C-terminal element EA743_017425 PF13005 zinc-finger binding domain of transposase IS66 EA743_017425 PF13007 Transposase C of IS166 homeodomain EA743_017450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EA743_017470 PF03884 DNA gyrase inhibitor YacG EA743_017475 PF00753 Metallo-beta-lactamase superfamily EA743_017480 PF00762 Ferrochelatase EA743_017490 PF01177 Asp/Glu/Hydantoin racemase EA743_017510 PF01206 Sulfurtransferase TusA EA743_017515 PF00571 CBS domain EA743_017515 PF03471 Transporter associated domain EA743_017520 PF00795 Carbon-nitrogen hydrolase EA743_017525 PF01588 Putative tRNA binding domain EA743_017535 PF08334 Type II secretion system (T2SS), protein G EA743_017535 PF07963 Prokaryotic N-terminal methylation motif EA743_017540 PF00482 Type II secretion system (T2SS), protein F EA743_017545 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EA743_017545 PF18074 Primosomal protein N C-terminal domain EA743_017545 PF17764 3′ DNA-binding domain (3′BD) EA743_017545 PF00271 Helicase conserved C-terminal domain EA743_017545 PF00270 DEAD/DEAH box helicase EA743_017550 PF02254 TrkA-N domain EA743_017550 PF00999 Sodium/hydrogen exchanger family EA743_017555 PF01430 Hsp33 protein EA743_017565 PF00226 DnaJ domain EA743_017565 PF01556 DnaJ C terminal domain EA743_017575 PF01544 CorA-like Mg2+ transporter protein EA743_017580 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EA743_017580 PF00575 S1 RNA binding domain EA743_017580 PF03725 3' exoribonuclease family, domain 2 EA743_017580 PF00013 KH domain EA743_017580 PF01138 3' exoribonuclease family, domain 1 EA743_017585 PF00312 Ribosomal protein S15 EA743_017595 PF13538 UvrD-like helicase C-terminal domain EA743_017600 PF13361 UvrD-like helicase C-terminal domain EA743_017600 PF00580 UvrD/REP helicase N-terminal domain EA743_017600 PF12705 PD-(D/E)XK nuclease superfamily EA743_017605 PF17946 RecC C-terminal domain EA743_017615 PF03976 Polyphosphate kinase 2 (PPK2) EA743_017625 PF01209 ubiE/COQ5 methyltransferase family EA743_017635 PF03109 ABC1 family EA743_017640 PF01494 FAD binding domain EA743_017645 PF01502 Phosphoribosyl-AMP cyclohydrolase EA743_017660 PF13244 Domain of unknown function (DUF4040) EA743_017660 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EA743_017660 PF00361 Proton-conducting membrane transporter EA743_017660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EA743_017665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EA743_017670 PF00361 Proton-conducting membrane transporter EA743_017680 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EA743_017690 PF02033 Ribosome-binding factor A EA743_017695 PF08364 Bacterial translation initiation factor IF-2 associated region EA743_017695 PF04760 Translation initiation factor IF-2, N-terminal region EA743_017695 PF11987 Translation-initiation factor 2 EA743_017695 PF00009 Elongation factor Tu GTP binding domain EA743_017700 PF13184 NusA-like KH domain EA743_017700 PF08529 NusA N-terminal domain EA743_017700 PF00575 S1 RNA binding domain EA743_017705 PF17384 RimP C-terminal SH3 domain EA743_017705 PF02576 RimP N-terminal domain EA743_017725 PF03840 Preprotein translocase SecG subunit EA743_017730 PF00121 Triosephosphate isomerase EA743_017735 PF00437 Type II/IV secretion system protein EA743_017735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EA743_017740 PF00482 Type II secretion system (T2SS), protein F EA743_017745 PF06750 Bacterial Peptidase A24 N-terminal domain EA743_017745 PF01478 Type IV leader peptidase family EA743_017750 PF01121 Dephospho-CoA kinase EA743_017760 PF00588 SpoU rRNA Methylase family EA743_017760 PF08032 RNA 2'-O ribose methyltransferase substrate binding EA743_017765 PF06865 Pyrimidine/purine nucleoside phosphorylase EA743_017775 PF02463 RecF/RecN/SMC N terminal domain EA743_017780 PF02622 Uncharacterized ACR, COG1678 EA743_017785 PF03652 Holliday junction resolvase EA743_017790 PF13533 Biotin-lipoyl like EA743_017815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EA743_017815 PF02805 Metal binding domain of Ada EA743_017815 PF12833 Helix-turn-helix domain EA743_017815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EA743_017820 PF01066 CDP-alcohol phosphatidyltransferase EA743_017830 PF08459 UvrC Helix-hairpin-helix N-terminal EA743_017830 PF01541 GIY-YIG catalytic domain EA743_017830 PF02151 UvrB/uvrC motif EA743_017845 PF00378 Enoyl-CoA hydratase/isomerase EA743_017845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EA743_017845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EA743_017850 PF00108 Thiolase, N-terminal domain EA743_017850 PF02803 Thiolase, C-terminal domain EA743_017870 PF13411 MerR HTH family regulatory protein EA743_017880 PF01323 DSBA-like thioredoxin domain EA743_017895 PF00183 Hsp90 protein EA743_017895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_017910 PF13726 Na+-H+ antiporter family EA743_017910 PF03553 Na+/H+ antiporter family EA743_017935 PF04997 RNA polymerase Rpb1, domain 1 EA743_017935 PF00623 RNA polymerase Rpb1, domain 2 EA743_017935 PF04983 RNA polymerase Rpb1, domain 3 EA743_017935 PF05000 RNA polymerase Rpb1, domain 4 EA743_017935 PF04998 RNA polymerase Rpb1, domain 5 EA743_017940 PF00562 RNA polymerase Rpb2, domain 6 EA743_017940 PF04561 RNA polymerase Rpb2, domain 2 EA743_017940 PF04560 RNA polymerase Rpb2, domain 7 EA743_017940 PF04563 RNA polymerase beta subunit EA743_017940 PF10385 RNA polymerase beta subunit external 1 domain EA743_017940 PF04565 RNA polymerase Rpb2, domain 3 EA743_017945 PF16320 Ribosomal protein L7/L12 dimerisation domain EA743_017945 PF00542 Ribosomal protein L7/L12 C-terminal domain EA743_017950 PF00466 Ribosomal protein L10 EA743_017955 PF00687 Ribosomal protein L1p/L10e family EA743_017960 PF00298 Ribosomal protein L11, RNA binding domain EA743_017960 PF03946 Ribosomal protein L11, N-terminal domain EA743_017965 PF00467 KOW motif EA743_017965 PF02357 Transcription termination factor nusG EA743_017970 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EA743_017980 PF03143 Elongation factor Tu C-terminal domain EA743_017980 PF00009 Elongation factor Tu GTP binding domain EA743_017980 PF03144 Elongation factor Tu domain 2 EA743_018005 PF04715 Anthranilate synthase component I, N terminal region EA743_018005 PF00425 chorismate binding enzyme EA743_018010 PF13419 Haloacid dehalogenase-like hydrolase EA743_018015 PF12401 Protein of unknown function (DUF2662) EA743_018015 PF00498 FHA domain EA743_018020 PF00263 Bacterial type II and III secretion system protein EA743_018020 PF03958 Bacterial type II/III secretion system short domain EA743_018035 PF00816 H-NS histone family EA743_018060 PF03900 Porphobilinogen deaminase, C-terminal domain EA743_018060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EA743_018065 PF00072 Response regulator receiver domain EA743_018065 PF04397 LytTr DNA-binding domain EA743_018070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_018070 PF06580 Histidine kinase EA743_018070 PF07694 5TMR of 5TMR-LYT EA743_018075 PF00206 Lyase EA743_018075 PF14698 Argininosuccinate lyase C-terminal EA743_018080 PF04362 Bacterial Fe(2+) trafficking EA743_018085 PF01895 PhoU domain EA743_018090 PF02321 Outer membrane efflux protein EA743_018095 PF00892 EamA-like transporter family EA743_018110 PF13667 ThiC-associated domain EA743_018110 PF01964 Radical SAM ThiC family EA743_018115 PF00293 NUDIX domain EA743_018120 PF00149 Calcineurin-like phosphoesterase EA743_018125 PF01258 Prokaryotic dksA/traR C4-type zinc finger EA743_018130 PF00749 tRNA synthetases class I (E and Q), catalytic domain EA743_018135 PF01098 Cell cycle protein EA743_018140 PF08245 Mur ligase middle domain EA743_018140 PF02875 Mur ligase family, glutamate ligase domain EA743_018150 PF02421 Ferrous iron transport protein B EA743_018150 PF07664 Ferrous iron transport protein B C terminus EA743_018150 PF07670 Nucleoside recognition EA743_018160 PF02899 Phage integrase, N-terminal SAM-like domain EA743_018160 PF00589 Phage integrase family EA743_018165 PF13098 Thioredoxin-like domain EA743_018165 PF10411 Disulfide bond isomerase protein N-terminus EA743_018170 PF00742 Homoserine dehydrogenase EA743_018170 PF03447 Homoserine dehydrogenase, NAD binding domain EA743_018170 PF01842 ACT domain EA743_018175 PF00291 Pyridoxal-phosphate dependent enzyme EA743_018180 PF00768 D-alanyl-D-alanine carboxypeptidase EA743_018185 PF00072 Response regulator receiver domain EA743_018185 PF00196 Bacterial regulatory proteins, luxR family EA743_018190 PF00512 His Kinase A (phospho-acceptor) domain EA743_018190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_018195 PF00072 Response regulator receiver domain EA743_018195 PF02954 Bacterial regulatory protein, Fis family EA743_018195 PF00158 Sigma-54 interaction domain EA743_018200 PF00595 PDZ domain EA743_018200 PF03572 Peptidase family S41 EA743_018205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EA743_018205 PF01676 Metalloenzyme superfamily EA743_018210 PF03739 Lipopolysaccharide export system permease LptF/LptG EA743_018220 PF02789 Cytosol aminopeptidase family, N-terminal domain EA743_018220 PF00883 Cytosol aminopeptidase family, catalytic domain EA743_018240 PF00677 Lumazine binding domain EA743_018250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EA743_018250 PF01872 RibD C-terminal domain EA743_018255 PF03477 ATP cone domain EA743_018260 PF00909 Ammonium Transporter Family EA743_018265 PF00543 Nitrogen regulatory protein P-II EA743_018275 PF01078 Magnesium chelatase, subunit ChlI EA743_018275 PF13335 Magnesium chelatase, subunit ChlI C-terminal EA743_018310 PF13411 MerR HTH family regulatory protein EA743_018325 PF07664 Ferrous iron transport protein B C terminus EA743_018325 PF02421 Ferrous iron transport protein B EA743_018325 PF07670 Nucleoside recognition EA743_018345 PF00394 Multicopper oxidase EA743_018345 PF07732 Multicopper oxidase EA743_018345 PF07731 Multicopper oxidase EA743_018355 PF00072 Response regulator receiver domain EA743_018355 PF00486 Transcriptional regulatory protein, C terminal EA743_018360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA743_018360 PF00512 His Kinase A (phospho-acceptor) domain EA743_018360 PF00672 HAMP domain EA743_018400 PF00665 Integrase core domain EA743_018410 PF01078 Magnesium chelatase, subunit ChlI EA743_018410 PF13335 Magnesium chelatase, subunit ChlI C-terminal EA743_018415 PF00392 Bacterial regulatory proteins, gntR family EA743_018415 PF00155 Aminotransferase class I and II EA743_018420 PF00596 Class II Aldolase and Adducin N-terminal domain EA743_018425 PF00701 Dihydrodipicolinate synthetase family EA743_018450 PF13005 zinc-finger binding domain of transposase IS66 EA743_018450 PF13817 IS66 C-terminal element EA743_018450 PF13007 Transposase C of IS166 homeodomain EA743_018450 PF03050 Transposase IS66 family EA743_018455 PF00719 Inorganic pyrophosphatase EA743_018470 PF00501 AMP-binding enzyme EA743_018470 PF13193 AMP-binding enzyme C-terminal domain EA743_018475 PF03989 DNA gyrase C-terminal domain, beta-propeller EA743_018475 PF00521 DNA gyrase/topoisomerase IV, subunit A EA743_018480 PF07690 Major Facilitator Superfamily EA743_018485 PF03458 UPF0126 domain EA743_018490 PF02810 SEC-C motif EA743_018495 PF03741 Integral membrane protein TerC family EA743_018495 PF03471 Transporter associated domain EA743_018500 PF03641 Possible lysine decarboxylase EA743_018505 PF07690 Major Facilitator Superfamily EA743_018515 PF00817 impB/mucB/samB family EA743_018515 PF11799 impB/mucB/samB family C-terminal domain EA743_018515 PF11798 IMS family HHH motif EA743_018530 PF08497 Radical SAM N-terminal EA743_018530 PF11842 Domain of unknown function (DUF3362) EA743_018530 PF04055 Radical SAM superfamily EA743_018550 PF03358 NADPH-dependent FMN reductase EA743_018560 PF00291 Pyridoxal-phosphate dependent enzyme EA743_018595 PF00440 Bacterial regulatory proteins, tetR family EA743_018620 PF01327 Polypeptide deformylase EA743_018630 PF02481 DNA recombination-mediator protein A EA743_018630 PF17782 DprA winged helix domain EA743_018635 PF01300 Telomere recombination EA743_018640 PF00892 EamA-like transporter family EA743_018645 PF00440 Bacterial regulatory proteins, tetR family EA743_018650 PF07690 Major Facilitator Superfamily EA743_018660 PF00255 Glutathione peroxidase EA743_018670 PF11008 Protein of unknown function (DUF2846) EA743_018675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EA743_018680 PF02874 ATP synthase alpha/beta family, beta-barrel domain EA743_018680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EA743_018685 PF00231 ATP synthase EA743_018690 PF02874 ATP synthase alpha/beta family, beta-barrel domain EA743_018690 PF00306 ATP synthase alpha/beta chain, C terminal domain EA743_018690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EA743_018695 PF00213 ATP synthase delta (OSCP) subunit EA743_018700 PF00430 ATP synthase B/B' CF(0) EA743_018705 PF00137 ATP synthase subunit C EA743_018710 PF00119 ATP synthase A chain EA743_018730 PF00005 ABC transporter EA743_018735 PF00950 ABC 3 transport family EA743_018740 PF01810 LysE type translocator EA743_018745 PF04261 Dyp-type peroxidase family EA743_018755 PF00390 Malic enzyme, N-terminal domain EA743_018755 PF03949 Malic enzyme, NAD binding domain EA743_018760 PF00750 tRNA synthetases class I (R) EA743_018760 PF05746 DALR anticodon binding domain EA743_018760 PF03485 Arginyl tRNA synthetase N terminal domain EA743_018780 PF05726 Pirin C-terminal cupin domain EA743_018780 PF02678 Pirin EA743_018790 PF03551 Transcriptional regulator PadR-like family EA743_018795 PF13427 Domain of unknown function (DUF4111) EA743_018795 PF01909 Nucleotidyltransferase domain EA743_018800 PF02540 NAD synthase EA743_018800 PF00117 Glutamine amidotransferase class-I EA743_018800 PF00958 GMP synthase C terminal domain EA743_018805 PF04286 Protein of unknown function (DUF445) EA743_018810 PF07681 DoxX EA743_018815 PF09335 SNARE associated Golgi protein EA743_018830 PF13614 AAA domain EA743_018840 PF01722 BolA-like protein EA743_018860 PF13817 IS66 C-terminal element EA743_018860 PF03050 Transposase IS66 family EA743_018860 PF13005 zinc-finger binding domain of transposase IS66 EA743_018860 PF13007 Transposase C of IS166 homeodomain EA743_018880 PF16363 GDP-mannose 4,6 dehydratase EA743_018895 PF00975 Thioesterase domain EA743_018895 PF00550 Phosphopantetheine attachment site EA743_018895 PF00501 AMP-binding enzyme EA743_018895 PF13193 AMP-binding enzyme C-terminal domain EA743_018895 PF00668 Condensation domain EA743_018900 PF00550 Phosphopantetheine attachment site EA743_018900 PF00975 Thioesterase domain EA743_018900 PF08242 Methyltransferase domain EA743_018900 PF16197 Ketoacyl-synthetase C-terminal extension EA743_018900 PF14765 Polyketide synthase dehydratase EA743_018900 PF02801 Beta-ketoacyl synthase, C-terminal domain EA743_018900 PF00109 Beta-ketoacyl synthase, N-terminal domain EA743_018905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_018905 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_018905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_018910 PF00501 AMP-binding enzyme EA743_018915 PF03472 Autoinducer binding domain EA743_018915 PF00196 Bacterial regulatory proteins, luxR family EA743_018925 PF00765 Autoinducer synthase EA743_018930 PF07690 Major Facilitator Superfamily EA743_018930 PF00083 Sugar (and other) transporter EA743_018935 PF00378 Enoyl-CoA hydratase/isomerase EA743_018940 PF00378 Enoyl-CoA hydratase/isomerase EA743_018945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EA743_018945 PF02770 Acyl-CoA dehydrogenase, middle domain EA743_018945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EA743_018950 PF00501 AMP-binding enzyme EA743_018950 PF13193 AMP-binding enzyme C-terminal domain EA743_018955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EA743_018955 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EA743_018960 PF00171 Aldehyde dehydrogenase family EA743_018970 PF00324 Amino acid permease EA743_018975 PF00324 Amino acid permease EA743_018980 PF01042 Endoribonuclease L-PSP EA743_018985 PF00842 Alanine racemase, C-terminal domain EA743_018985 PF01168 Alanine racemase, N-terminal domain EA743_018990 PF01266 FAD dependent oxidoreductase EA743_018995 PF01037 Lrp/AsnC ligand binding domain EA743_019005 PF00593 TonB dependent receptor EA743_019005 PF07715 TonB-dependent Receptor Plug Domain EA743_019020 PF00849 RNA pseudouridylate synthase EA743_019060 PF00109 Beta-ketoacyl synthase, N-terminal domain EA743_019060 PF02801 Beta-ketoacyl synthase, C-terminal domain EA743_019090 PF00330 Aconitase family (aconitate hydratase) EA743_019090 PF00694 Aconitase C-terminal domain EA743_019095 PF00285 Citrate synthase, C-terminal domain EA743_019105 PF07729 FCD domain EA743_019105 PF00392 Bacterial regulatory proteins, gntR family EA743_019115 PF00155 Aminotransferase class I and II EA743_019120 PF01565 FAD binding domain EA743_019120 PF09330 D-lactate dehydrogenase, membrane binding EA743_019125 PF01070 FMN-dependent dehydrogenase EA743_019130 PF07729 FCD domain EA743_019130 PF00392 Bacterial regulatory proteins, gntR family EA743_019135 PF02652 L-lactate permease EA743_019140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EA743_019140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EA743_019140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EA743_019140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EA743_019145 PF16363 GDP-mannose 4,6 dehydratase EA743_019150 PF00342 Phosphoglucose isomerase EA743_019155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EA743_019155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EA743_019155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EA743_019160 PF00483 Nucleotidyl transferase EA743_019165 PF02397 Bacterial sugar transferase EA743_019170 PF00535 Glycosyl transferase family 2 EA743_019175 PF00534 Glycosyl transferases group 1 EA743_019190 PF13439 Glycosyltransferase Family 4 EA743_019190 PF00534 Glycosyl transferases group 1 EA743_019195 PF14602 Hexapeptide repeat of succinyl-transferase EA743_019195 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_019195 PF12464 Maltose acetyltransferase EA743_019205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EA743_019210 PF00132 Bacterial transferase hexapeptide (six repeats) EA743_019215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EA743_019215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EA743_019220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EA743_019220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EA743_019220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EA743_019225 PF10531 SLBB domain EA743_019225 PF02563 Polysaccharide biosynthesis/export protein EA743_019225 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EA743_019230 PF01451 Low molecular weight phosphotyrosine protein phosphatase EA743_019235 PF13614 AAA domain EA743_019235 PF13807 G-rich domain on putative tyrosine kinase EA743_019235 PF02706 Chain length determinant protein EA743_019240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EA743_019240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA743_019245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA743_019245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EA743_019250 PF03023 Lipid II flippase MurJ EA743_019255 PF01510 N-acetylmuramoyl-L-alanine amidase EA743_019260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EA743_019260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EA743_019275 PF01138 3' exoribonuclease family, domain 1 EA743_019275 PF03725 3' exoribonuclease family, domain 2 EA743_019280 PF00487 Fatty acid desaturase EA743_019285 PF00175 Oxidoreductase NAD-binding domain EA743_019290 PF00440 Bacterial regulatory proteins, tetR family EA743_019295 PF00440 Bacterial regulatory proteins, tetR family EA743_019295 PF08360 QacR-like protein, C-terminal region EA743_019300 PF01323 DSBA-like thioredoxin domain EA743_019310 PF13419 Haloacid dehalogenase-like hydrolase EA743_019315 PF00106 short chain dehydrogenase EA743_019330 PF00696 Amino acid kinase family EA743_019330 PF00583 Acetyltransferase (GNAT) family EA743_019335 PF09084 NMT1/THI5 like EA743_019340 PF09084 NMT1/THI5 like EA743_019345 PF00296 Luciferase-like monooxygenase EA743_019350 PF00528 Binding-protein-dependent transport system inner membrane component EA743_019355 PF00005 ABC transporter EA743_019360 PF08362 YcdC-like protein, C-terminal region EA743_019360 PF00440 Bacterial regulatory proteins, tetR family EA743_019365 PF01048 Phosphorylase superfamily EA743_019375 PF06574 FAD synthetase EA743_019375 PF01687 Riboflavin kinase EA743_019380 PF06827 Zinc finger found in FPG and IleRS EA743_019380 PF00133 tRNA synthetases class I (I, L, M and V) EA743_019380 PF08264 Anticodon-binding domain of tRNA EA743_019385 PF01252 Signal peptidase (SPase) II EA743_019390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA743_019430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EA743_019435 PF07859 alpha/beta hydrolase fold EA743_019460 PF01025 GrpE EA743_019465 PF00012 Hsp70 protein EA743_019485 PF13406 Transglycosylase SLT domain EA743_019490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EA743_019490 PF02222 ATP-grasp domain EA743_019495 PF00731 AIR carboxylase EA743_019510 PF01225 Mur ligase family, catalytic domain EA743_019510 PF02875 Mur ligase family, glutamate ligase domain EA743_019510 PF08245 Mur ligase middle domain EA743_019520 PF01569 PAP2 superfamily EA743_019525 PF03741 Integral membrane protein TerC family EA743_019535 PF03738 Glutathionylspermidine synthase preATP-grasp EA743_019545 PF01979 Amidohydrolase family EA743_019550 PF00156 Phosphoribosyl transferase domain EA743_019560 PF13098 Thioredoxin-like domain EA743_019560 PF10411 Disulfide bond isomerase protein N-terminus EA743_019565 PF16916 Dimerisation domain of Zinc Transporter EA743_019565 PF01545 Cation efflux family EA743_019570 PF02583 Metal-sensitive transcriptional repressor EA743_019575 PF10396 GTP-binding protein TrmE N-terminus EA743_019575 PF12631 MnmE helical domain EA743_019575 PF01926 50S ribosome-binding GTPase EA743_019580 PF14849 YidC periplasmic domain EA743_019580 PF02096 60Kd inner membrane protein EA743_019585 PF01809 Putative membrane protein insertion efficiency factor EA743_019590 PF00825 Ribonuclease P EA743_019595 PF00468 Ribosomal protein L34 EA743_019730 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EA743_019735 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EA743_019850 PF02899 Phage integrase, N-terminal SAM-like domain EA743_019850 PF00589 Phage integrase family EA743_019865 PF13438 Domain of unknown function (DUF4113) EA743_019865 PF00817 impB/mucB/samB family EA743_019865 PF11799 impB/mucB/samB family C-terminal domain EA743_019865 PF11798 IMS family HHH motif