locus-tag class description H5029_00005 PF11638 DnaA N-terminal domain H5029_00005 PF00308 Bacterial dnaA protein H5029_00005 PF08299 Bacterial dnaA protein helix-turn-helix H5029_00010 PF02767 DNA polymerase III beta subunit, central domain H5029_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H5029_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H5029_00015 PF02463 RecF/RecN/SMC N terminal domain H5029_00020 PF00986 DNA gyrase B subunit, carboxyl terminus H5029_00020 PF18053 DNA gyrase B subunit insert domain H5029_00020 PF00204 DNA gyrase B H5029_00020 PF01751 Toprim domain H5029_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_00030 PF09335 SNARE associated Golgi protein H5029_00035 PF12848 ABC transporter H5029_00035 PF00005 ABC transporter H5029_00055 PF01521 Iron-sulphur cluster biosynthesis H5029_00060 PF00561 alpha/beta hydrolase fold H5029_00065 PF03702 Anhydro-N-acetylmuramic acid kinase H5029_00070 PF00579 tRNA synthetases class I (W and Y) H5029_00110 PF00209 Sodium:neurotransmitter symporter family H5029_00120 PF01029 NusB family H5029_00120 PF01189 16S rRNA methyltransferase RsmB/F H5029_00125 PF00551 Formyl transferase H5029_00125 PF02911 Formyl transferase, C-terminal domain H5029_00130 PF00920 Dehydratase family H5029_00145 PF03466 LysR substrate binding domain H5029_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_00150 PF00860 Permease family H5029_00155 PF00311 Phosphoenolpyruvate carboxylase H5029_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region H5029_00160 PF00440 Bacterial regulatory proteins, tetR family H5029_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_00170 PF00873 AcrB/AcrD/AcrF family H5029_00180 PF01556 DnaJ C terminal domain H5029_00180 PF00226 DnaJ domain H5029_00180 PF00684 DnaJ central domain H5029_00190 PF05173 Dihydrodipicolinate reductase, C-terminus H5029_00190 PF01113 Dihydrodipicolinate reductase, N-terminus H5029_00200 PF07690 Major Facilitator Superfamily H5029_00205 PF00248 Aldo/keto reductase family H5029_00210 PF03466 LysR substrate binding domain H5029_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_00225 PF00392 Bacterial regulatory proteins, gntR family H5029_00225 PF00155 Aminotransferase class I and II H5029_00230 PF00107 Zinc-binding dehydrogenase H5029_00230 PF08240 Alcohol dehydrogenase GroES-like domain H5029_00235 PF03352 Methyladenine glycosylase H5029_00250 PF14815 NUDIX domain H5029_00250 PF10576 Iron-sulfur binding domain of endonuclease III H5029_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein H5029_00250 PF00633 Helix-hairpin-helix motif H5029_00265 PF07043 Protein of unknown function (DUF1328) H5029_00270 PF03692 Putative zinc- or iron-chelating domain H5029_00275 PF07995 Glucose / Sorbosone dehydrogenase H5029_00280 PF12002 MgsA AAA+ ATPase C terminal H5029_00280 PF00004 ATPase family associated with various cellular activities (AAA) H5029_00280 PF16193 AAA C-terminal domain H5029_00285 PF01226 Formate/nitrite transporter H5029_00295 PF01259 SAICAR synthetase H5029_00305 PF00701 Dihydrodipicolinate synthetase family H5029_00310 PF00857 Isochorismatase family H5029_00315 PF01758 Sodium Bile acid symporter family H5029_00320 PF01554 MatE H5029_00325 PF04463 Protein of unknown function (DUF523) H5029_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H5029_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H5029_00345 PF02798 Glutathione S-transferase, N-terminal domain H5029_00345 PF14497 Glutathione S-transferase, C-terminal domain H5029_00355 PF00324 Amino acid permease H5029_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain H5029_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain H5029_00375 PF07702 UTRA domain H5029_00375 PF00392 Bacterial regulatory proteins, gntR family H5029_00380 PF05962 HutD H5029_00385 PF01175 Urocanase Rossmann-like domain H5029_00385 PF17391 Urocanase N-terminal domain H5029_00385 PF17392 Urocanase C-terminal domain H5029_00390 PF00221 Aromatic amino acid lyase H5029_00395 PF00324 Amino acid permease H5029_00400 PF01979 Amidohydrolase family H5029_00405 PF00491 Arginase family H5029_00420 PF01177 Asp/Glu/Hydantoin racemase H5029_00430 PF00580 UvrD/REP helicase N-terminal domain H5029_00430 PF13361 UvrD-like helicase C-terminal domain H5029_00440 PF04851 Type III restriction enzyme, res subunit H5029_00440 PF00271 Helicase conserved C-terminal domain H5029_00440 PF08463 EcoEI R protein C-terminal H5029_00440 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H5029_00445 PF01420 Type I restriction modification DNA specificity domain H5029_00450 PF02384 N-6 DNA Methylase H5029_00450 PF12161 HsdM N-terminal domain H5029_00460 PF01381 Helix-turn-helix H5029_00475 PF00665 Integrase core domain H5029_00480 PF13737 Transposase DDE domain H5029_00500 PF01636 Phosphotransferase enzyme family H5029_00505 PF13936 Helix-turn-helix domain H5029_00505 PF00665 Integrase core domain H5029_00510 PF00753 Metallo-beta-lactamase superfamily H5029_00520 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H5029_00525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H5029_00530 PF03091 CutA1 divalent ion tolerance protein H5029_00575 PF13936 Helix-turn-helix domain H5029_00575 PF00665 Integrase core domain H5029_00580 PF00753 Metallo-beta-lactamase superfamily H5029_00580 PF14863 Alkyl sulfatase dimerisation H5029_00580 PF14864 Alkyl sulfatase C-terminal H5029_00590 PF13936 Helix-turn-helix domain H5029_00590 PF00665 Integrase core domain H5029_00595 PF01695 IstB-like ATP binding protein H5029_00620 PF06527 TniQ H5029_00620 PF15978 Tn7-like transposition protein D H5029_00625 PF11426 Tn7 transposition regulator TnsC H5029_00625 PF13401 AAA domain H5029_00630 PF00665 Integrase core domain H5029_00635 PF08721 TnsA endonuclease C terminal H5029_00635 PF08722 TnsA endonuclease N terminal H5029_00640 PF01380 SIS domain H5029_00645 PF14602 Hexapeptide repeat of succinyl-transferase H5029_00645 PF12804 MobA-like NTP transferase domain H5029_00645 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_00650 PF04608 Phosphatidylglycerophosphatase A H5029_00655 PF02769 AIR synthase related protein, C-terminal domain H5029_00655 PF00586 AIR synthase related protein, N-terminal domain H5029_00660 PF01029 NusB family H5029_00665 PF00885 6,7-dimethyl-8-ribityllumazine synthase H5029_00670 PF00925 GTP cyclohydrolase II H5029_00670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H5029_00695 PF02580 D-Tyr-tRNA(Tyr) deacylase H5029_00700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H5029_00700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H5029_00705 PF00581 Rhodanese-like domain H5029_00710 PF02666 Phosphatidylserine decarboxylase H5029_00715 PF03069 Acetamidase/Formamidase family H5029_00735 PF00989 PAS fold H5029_00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_00735 PF00512 His Kinase A (phospho-acceptor) domain H5029_00735 PF11808 Phosphate regulon sensor protein PhoR H5029_00740 PF00072 Response regulator receiver domain H5029_00740 PF00486 Transcriptional regulatory protein, C terminal H5029_00750 PF00106 short chain dehydrogenase H5029_00755 PF01554 MatE H5029_00760 PF00155 Aminotransferase class I and II H5029_00765 PF04286 Protein of unknown function (DUF445) H5029_00780 PF04262 Glutamate-cysteine ligase H5029_00785 PF02600 Disulfide bond formation protein DsbB H5029_00790 PF13296 Putative type VI secretion system Rhs element Vgr H5029_00790 PF04717 Type VI secretion system, phage-baseplate injector H5029_00790 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H5029_00795 PF01476 LysM domain H5029_00795 PF00877 NlpC/P60 family H5029_00810 PF05728 Uncharacterised protein family (UPF0227) H5029_00815 PF01751 Toprim domain H5029_00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_00815 PF00986 DNA gyrase B subunit, carboxyl terminus H5029_00815 PF00204 DNA gyrase B H5029_00820 PF00106 short chain dehydrogenase H5029_00825 PF04115 Ureidoglycolate lyase H5029_00830 PF03561 Allantoicase repeat H5029_00835 PF01494 FAD binding domain H5029_00845 PF00860 Permease family H5029_00850 PF00576 HIUase/Transthyretin family H5029_00880 PF11412 Disulphide bond corrector protein DsbC H5029_00880 PF02683 Cytochrome C biogenesis protein transmembrane region H5029_00885 PF07694 5TMR of 5TMR-LYT H5029_00885 PF00990 Diguanylate cyclase, GGDEF domain H5029_00890 PF07859 alpha/beta hydrolase fold H5029_00900 PF03960 ArsC family H5029_00905 PF03372 Endonuclease/Exonuclease/phosphatase family H5029_00910 PF00156 Phosphoribosyl transferase domain H5029_00915 PF07715 TonB-dependent Receptor Plug Domain H5029_00915 PF00593 TonB dependent receptor H5029_00925 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H5029_00925 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H5029_00930 PF04101 Glycosyltransferase family 28 C-terminal domain H5029_00930 PF03033 Glycosyltransferase family 28 N-terminal domain H5029_00935 PF02875 Mur ligase family, glutamate ligase domain H5029_00935 PF08245 Mur ligase middle domain H5029_00935 PF01225 Mur ligase family, catalytic domain H5029_00940 PF07478 D-ala D-ala ligase C-terminus H5029_00940 PF01820 D-ala D-ala ligase N-terminus H5029_00945 PF08478 POTRA domain, FtsQ-type H5029_00945 PF03799 Cell division protein FtsQ H5029_00950 PF02491 SHS2 domain inserted in FTSA H5029_00955 PF00091 Tubulin/FtsZ family, GTPase domain H5029_00955 PF12327 FtsZ family, C-terminal domain H5029_00960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H5029_00970 PF01551 Peptidase family M23 H5029_00975 PF00456 Transketolase, thiamine diphosphate binding domain H5029_00975 PF17831 Pyruvate dehydrogenase E1 component middle domain H5029_00980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H5029_00980 PF02817 e3 binding domain H5029_00980 PF00364 Biotin-requiring enzyme H5029_00990 PF01169 Uncharacterized protein family UPF0016 H5029_00995 PF07715 TonB-dependent Receptor Plug Domain H5029_00995 PF00593 TonB dependent receptor H5029_01000 PF00258 Flavodoxin H5029_01000 PF01613 Flavin reductase like domain H5029_01005 PF03692 Putative zinc- or iron-chelating domain H5029_01010 PF00478 IMP dehydrogenase / GMP reductase domain H5029_01010 PF00571 CBS domain H5029_01015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H5029_01015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H5029_01015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H5029_01015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H5029_01020 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H5029_01020 PF01243 Pyridoxamine 5'-phosphate oxidase H5029_01025 PF17768 RecJ OB domain H5029_01025 PF01368 DHH family H5029_01025 PF02272 DHHA1 domain H5029_01045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H5029_01050 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H5029_01055 PF04452 RNA methyltransferase H5029_01060 PF00924 Mechanosensitive ion channel H5029_01070 PF00501 AMP-binding enzyme H5029_01070 PF16177 Acetyl-coenzyme A synthetase N-terminus H5029_01070 PF13193 AMP-binding enzyme C-terminal domain H5029_01075 PF00857 Isochorismatase family H5029_01080 PF01037 Lrp/AsnC ligand binding domain H5029_01090 PF00296 Luciferase-like monooxygenase H5029_01095 PF03358 NADPH-dependent FMN reductase H5029_01100 PF00072 Response regulator receiver domain H5029_01100 PF00196 Bacterial regulatory proteins, luxR family H5029_01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_01110 PF00672 HAMP domain H5029_01110 PF01627 Hpt domain H5029_01110 PF00512 His Kinase A (phospho-acceptor) domain H5029_01110 PF00072 Response regulator receiver domain H5029_01115 PF04341 Protein of unknown function, DUF485 H5029_01120 PF00474 Sodium:solute symporter family H5029_01130 PF02028 BCCT, betaine/carnitine/choline family transporter H5029_01140 PF00990 Diguanylate cyclase, GGDEF domain H5029_01150 PF17755 UvrA DNA-binding domain H5029_01150 PF17760 UvrA interaction domain H5029_01150 PF00005 ABC transporter H5029_01155 PF00440 Bacterial regulatory proteins, tetR family H5029_01155 PF16925 Tetracyclin repressor-like, C-terminal domain H5029_01160 PF00107 Zinc-binding dehydrogenase H5029_01160 PF08240 Alcohol dehydrogenase GroES-like domain H5029_01170 PF06942 GlpM protein H5029_01175 PF02581 Thiamine monophosphate synthase H5029_01175 PF03070 TENA/THI-4/PQQC family H5029_01175 PF08543 Phosphomethylpyrimidine kinase H5029_01185 PF07690 Major Facilitator Superfamily H5029_01190 PF00436 Single-strand binding protein family H5029_01200 PF03591 AzlC protein H5029_01210 PF00324 Amino acid permease H5029_01215 PF00155 Aminotransferase class I and II H5029_01215 PF00392 Bacterial regulatory proteins, gntR family H5029_01220 PF00202 Aminotransferase class-III H5029_01225 PF00171 Aldehyde dehydrogenase family H5029_01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_01235 PF00857 Isochorismatase family H5029_01240 PF05726 Pirin C-terminal cupin domain H5029_01240 PF02678 Pirin H5029_01245 PF01593 Flavin containing amine oxidoreductase H5029_01265 PF07690 Major Facilitator Superfamily H5029_01270 PF03466 LysR substrate binding domain H5029_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_01290 PF00248 Aldo/keto reductase family H5029_01295 PF02311 AraC-like ligand binding domain H5029_01295 PF12833 Helix-turn-helix domain H5029_01325 PF01638 HxlR-like helix-turn-helix H5029_01330 PF02525 Flavodoxin-like fold H5029_01360 PF02705 K+ potassium transporter H5029_01385 PF00230 Major intrinsic protein H5029_01400 PF00977 Histidine biosynthesis protein H5029_01405 PF01636 Phosphotransferase enzyme family H5029_01420 PF03992 Antibiotic biosynthesis monooxygenase H5029_01435 PF00977 Histidine biosynthesis protein H5029_01450 PF00117 Glutamine amidotransferase class-I H5029_01455 PF00475 Imidazoleglycerol-phosphate dehydratase H5029_01475 PF00583 Acetyltransferase (GNAT) family H5029_01480 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain H5029_01480 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain H5029_01490 PF00672 HAMP domain H5029_01490 PF00512 His Kinase A (phospho-acceptor) domain H5029_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_01495 PF00072 Response regulator receiver domain H5029_01495 PF00486 Transcriptional regulatory protein, C terminal H5029_01500 PF17674 HHH domain H5029_01500 PF00575 S1 RNA binding domain H5029_01500 PF09371 Tex-like protein N-terminal domain H5029_01500 PF16921 Tex protein YqgF-like domain H5029_01505 PF01740 STAS domain H5029_01505 PF00916 Sulfate permease family H5029_01510 PF00106 short chain dehydrogenase H5029_01515 PF01053 Cys/Met metabolism PLP-dependent enzyme H5029_01520 PF00005 ABC transporter H5029_01520 PF12848 ABC transporter H5029_01545 PF04191 Phospholipid methyltransferase H5029_01565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_01565 PF00529 HlyD membrane-fusion protein of T1SS H5029_01570 PF00873 AcrB/AcrD/AcrF family H5029_01575 PF01545 Cation efflux family H5029_01605 PF00324 Amino acid permease H5029_01620 PF00749 tRNA synthetases class I (E and Q), catalytic domain H5029_01635 PF01795 MraW methylase family H5029_01645 PF03717 Penicillin-binding Protein dimerisation domain H5029_01645 PF00905 Penicillin binding protein transpeptidase domain H5029_01650 PF08245 Mur ligase middle domain H5029_01650 PF02875 Mur ligase family, glutamate ligase domain H5029_01650 PF01225 Mur ligase family, catalytic domain H5029_01655 PF08245 Mur ligase middle domain H5029_01655 PF01225 Mur ligase family, catalytic domain H5029_01655 PF02875 Mur ligase family, glutamate ligase domain H5029_01660 PF00953 Glycosyl transferase family 4 H5029_01670 PF13847 Methyltransferase domain H5029_01675 PF00912 Transglycosylase H5029_01675 PF00905 Penicillin binding protein transpeptidase domain H5029_01675 PF17092 Penicillin-binding protein OB-like domain H5029_01680 PF11104 Type IV pilus assembly protein PilM; H5029_01685 PF05137 Fimbrial assembly protein (PilN) H5029_01690 PF04350 Pilus assembly protein, PilO H5029_01700 PF11741 AMIN domain H5029_01700 PF00263 Bacterial type II and III secretion system protein H5029_01700 PF03958 Bacterial type II/III secretion system short domain H5029_01700 PF07660 Secretin and TonB N terminus short domain H5029_01705 PF01202 Shikimate kinase H5029_01710 PF01761 3-dehydroquinate synthase H5029_01720 PF00310 Glutamine amidotransferases class-II H5029_01720 PF04898 Glutamate synthase central domain H5029_01720 PF01645 Conserved region in glutamate synthase H5029_01720 PF01493 GXGXG motif H5029_01725 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_01725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H5029_01735 PF04011 LemA family H5029_01740 PF04536 TPM domain H5029_01760 PF15864 Protein glycosylation ligase H5029_01760 PF04932 O-Antigen ligase H5029_01760 PF11846 Virulence factor membrane-bound polymerase, C-terminal H5029_01765 PF00210 Ferritin-like domain H5029_01770 PF04324 BFD-like [2Fe-2S] binding domain H5029_01775 PF01042 Endoribonuclease L-PSP H5029_01780 PF13291 ACT domain H5029_01780 PF04607 Region found in RelA / SpoT proteins H5029_01780 PF02824 TGS domain H5029_01790 PF01192 RNA polymerase Rpb6 H5029_01795 PF00625 Guanylate kinase H5029_01800 PF02401 LytB protein H5029_01840 PF00886 Ribosomal protein S16 H5029_01845 PF01782 RimM N-terminal domain H5029_01845 PF05239 PRC-barrel domain H5029_01850 PF01746 tRNA (Guanine-1)-methyltransferase H5029_01855 PF01245 Ribosomal protein L19 H5029_01860 PF00561 alpha/beta hydrolase fold H5029_01865 PF03280 Proteobacterial lipase chaperone protein H5029_01870 PF16198 tRNA pseudouridylate synthase B C-terminal domain H5029_01870 PF09157 Pseudouridine synthase II TruB, C-terminal H5029_01870 PF01509 TruB family pseudouridylate synthase (N terminal domain) H5029_01875 PF01925 Sulfite exporter TauE/SafE H5029_01885 PF00892 EamA-like transporter family H5029_01890 PF00892 EamA-like transporter family H5029_01895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5029_01895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H5029_01900 PF01565 FAD binding domain H5029_01900 PF02913 FAD linked oxidases, C-terminal domain H5029_01910 PF03992 Antibiotic biosynthesis monooxygenase H5029_01915 PF02525 Flavodoxin-like fold H5029_01925 PF07690 Major Facilitator Superfamily H5029_01930 PF12805 FUSC-like inner membrane protein yccS H5029_01935 PF00080 Copper/zinc superoxide dismutase (SODC) H5029_01940 PF01594 AI-2E family transporter H5029_01945 PF13614 AAA domain H5029_01975 PF00324 Amino acid permease H5029_01980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H5029_01980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H5029_01985 PF00202 Aminotransferase class-III H5029_01990 PF04958 Arginine N-succinyltransferase beta subunit H5029_01995 PF00171 Aldehyde dehydrogenase family H5029_02000 PF04996 Succinylarginine dihydrolase H5029_02005 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H5029_02020 PF05922 Peptidase inhibitor I9 H5029_02020 PF00082 Subtilase family H5029_02035 PF03466 LysR substrate binding domain H5029_02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_02040 PF00892 EamA-like transporter family H5029_02050 PF02092 Glycyl-tRNA synthetase beta subunit H5029_02050 PF05746 DALR anticodon binding domain H5029_02055 PF02091 Glycyl-tRNA synthetase alpha subunit H5029_02080 PF00571 CBS domain H5029_02085 PF04024 PspC domain H5029_02095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_02095 PF12806 Acetyl-CoA dehydrogenase C-terminal like H5029_02095 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_02095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_02105 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H5029_02105 PF08501 Shikimate dehydrogenase substrate binding domain H5029_02105 PF01488 Shikimate / quinate 5-dehydrogenase H5029_02110 PF01218 Coproporphyrinogen III oxidase H5029_02115 PF00925 GTP cyclohydrolase II H5029_02120 PF02779 Transketolase, pyrimidine binding domain H5029_02120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H5029_02120 PF02780 Transketolase, C-terminal domain H5029_02125 PF00459 Inositol monophosphatase family H5029_02130 PF00270 DEAD/DEAH box helicase H5029_02130 PF03880 DbpA RNA binding domain H5029_02130 PF12343 Cold shock protein DEAD box A H5029_02130 PF00271 Helicase conserved C-terminal domain H5029_02140 PF00005 ABC transporter H5029_02145 PF02405 Permease MlaE H5029_02155 PF05494 MlaC protein H5029_02165 PF01544 CorA-like Mg2+ transporter protein H5029_02170 PF03641 Possible lysine decarboxylase H5029_02175 PF00293 NUDIX domain H5029_02180 PF00156 Phosphoribosyl transferase domain H5029_02185 PF00270 DEAD/DEAH box helicase H5029_02185 PF00271 Helicase conserved C-terminal domain H5029_02185 PF17191 RecG wedge domain H5029_02200 PF01553 Acyltransferase H5029_02210 PF00375 Sodium:dicarboxylate symporter family H5029_02220 PF01926 50S ribosome-binding GTPase H5029_02225 PF02082 Transcriptional regulator H5029_02230 PF00175 Oxidoreductase NAD-binding domain H5029_02230 PF00042 Globin H5029_02230 PF00970 Oxidoreductase FAD-binding domain H5029_02235 PF05872 Bacterial protein of unknown function (DUF853) H5029_02240 PF01053 Cys/Met metabolism PLP-dependent enzyme H5029_02245 PF00117 Glutamine amidotransferase class-I H5029_02250 PF00338 Ribosomal protein S10p/S20e H5029_02255 PF00297 Ribosomal protein L3 H5029_02260 PF00573 Ribosomal protein L4/L1 family H5029_02265 PF00276 Ribosomal protein L23 H5029_02270 PF03947 Ribosomal Proteins L2, C-terminal domain H5029_02270 PF00181 Ribosomal Proteins L2, RNA binding domain H5029_02275 PF00203 Ribosomal protein S19 H5029_02280 PF00237 Ribosomal protein L22p/L17e H5029_02285 PF00189 Ribosomal protein S3, C-terminal domain H5029_02285 PF07650 KH domain H5029_02290 PF00252 Ribosomal protein L16p/L10e H5029_02295 PF00831 Ribosomal L29 protein H5029_02300 PF00366 Ribosomal protein S17 H5029_02305 PF00238 Ribosomal protein L14p/L23e H5029_02310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H5029_02310 PF00467 KOW motif H5029_02315 PF00281 Ribosomal protein L5 H5029_02315 PF00673 ribosomal L5P family C-terminus H5029_02320 PF00253 Ribosomal protein S14p/S29e H5029_02325 PF00410 Ribosomal protein S8 H5029_02330 PF00347 Ribosomal protein L6 H5029_02335 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H5029_02340 PF03719 Ribosomal protein S5, C-terminal domain H5029_02340 PF00333 Ribosomal protein S5, N-terminal domain H5029_02345 PF00327 Ribosomal protein L30p/L7e H5029_02350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H5029_02355 PF00344 SecY translocase H5029_02360 PF00444 Ribosomal protein L36 H5029_02365 PF00416 Ribosomal protein S13/S18 H5029_02370 PF00411 Ribosomal protein S11 H5029_02375 PF00163 Ribosomal protein S4/S9 N-terminal domain H5029_02375 PF01479 S4 domain H5029_02380 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H5029_02380 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H5029_02380 PF01000 RNA polymerase Rpb3/RpoA insert domain H5029_02385 PF01196 Ribosomal protein L17 H5029_02390 PF00743 Flavin-binding monooxygenase-like H5029_02395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_02395 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_02395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_02400 PF03937 Flavinator of succinate dehydrogenase H5029_02430 PF09526 Probable metal-binding protein (DUF2387) H5029_02435 PF01432 Peptidase family M3 H5029_02440 PF00773 RNB domain H5029_02440 PF00575 S1 RNA binding domain H5029_02440 PF17876 Cold shock domain H5029_02440 PF08461 Ribonuclease R winged-helix domain H5029_02440 PF08206 Ribonuclease B OB domain H5029_02485 PF01557 Fumarylacetoacetate (FAA) hydrolase family H5029_02490 PF12833 Helix-turn-helix domain H5029_02495 PF00892 EamA-like transporter family H5029_02500 PF03631 Virulence factor BrkB H5029_02505 PF03358 NADPH-dependent FMN reductase H5029_02530 PF02130 Uncharacterized protein family UPF0054 H5029_02535 PF02562 PhoH-like protein H5029_02540 PF00919 Uncharacterized protein family UPF0004 H5029_02540 PF01938 TRAM domain H5029_02540 PF04055 Radical SAM superfamily H5029_02545 PF01551 Peptidase family M23 H5029_02545 PF10145 Phage-related minor tail protein H5029_02545 PF01464 Transglycosylase SLT domain H5029_02555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H5029_02555 PF00056 lactate/malate dehydrogenase, NAD binding domain H5029_02575 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H5029_02580 PF01066 CDP-alcohol phosphatidyltransferase H5029_02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_02625 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_02630 PF00440 Bacterial regulatory proteins, tetR family H5029_02630 PF17932 Tetracyclin repressor-like, C-terminal domain H5029_02645 PF01039 Carboxyl transferase domain H5029_02650 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_02660 PF00289 Biotin carboxylase, N-terminal domain H5029_02660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H5029_02660 PF00364 Biotin-requiring enzyme H5029_02660 PF02785 Biotin carboxylase C-terminal domain H5029_02670 PF04386 Stringent starvation protein B H5029_02675 PF13417 Glutathione S-transferase, N-terminal domain H5029_02675 PF00043 Glutathione S-transferase, C-terminal domain H5029_02680 PF00380 Ribosomal protein S9/S16 H5029_02685 PF00572 Ribosomal protein L13 H5029_02690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H5029_02695 PF00398 Ribosomal RNA adenine dimethylase H5029_02700 PF00149 Calcineurin-like phosphoesterase H5029_02720 PF16360 GTP-binding GTPase Middle Region H5029_02720 PF13167 GTP-binding GTPase N-terminal H5029_02720 PF01926 50S ribosome-binding GTPase H5029_02730 PF13091 PLD-like domain H5029_02735 PF10518 TAT (twin-arginine translocation) pathway signal sequence H5029_02735 PF00149 Calcineurin-like phosphoesterase H5029_02740 PF01389 OmpA-like transmembrane domain H5029_02740 PF00691 OmpA family H5029_02755 PF00905 Penicillin binding protein transpeptidase domain H5029_02815 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_02815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5029_02825 PF00753 Metallo-beta-lactamase superfamily H5029_02825 PF04273 Putative phosphatase (DUF442) H5029_02830 PF00561 alpha/beta hydrolase fold H5029_02835 PF00085 Thioredoxin H5029_02840 PF03061 Thioesterase superfamily H5029_02850 PF04461 Protein of unknown function (DUF520) H5029_02860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H5029_02860 PF01266 FAD dependent oxidoreductase H5029_02870 PF03795 YCII-related domain H5029_02875 PF04279 Intracellular septation protein A H5029_02880 PF02811 PHP domain H5029_02885 PF01062 Bestrophin, RFP-TM, chloride channel H5029_02890 PF04002 RadC-like JAB domain H5029_02895 PF02441 Flavoprotein H5029_02895 PF04127 DNA / pantothenate metabolism flavoprotein H5029_02900 PF02355 Protein export membrane protein H5029_02900 PF07549 SecD/SecF GG Motif H5029_02905 PF02355 Protein export membrane protein H5029_02905 PF13721 SecD export protein N-terminal TM region H5029_02905 PF07549 SecD/SecF GG Motif H5029_02910 PF02699 Preprotein translocase subunit H5029_02915 PF01702 Queuine tRNA-ribosyltransferase H5029_02930 PF02547 Queuosine biosynthesis protein H5029_02940 PF00512 His Kinase A (phospho-acceptor) domain H5029_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_02940 PF07689 KaiB domain H5029_02945 PF03710 Glutamate-ammonia ligase adenylyltransferase H5029_02945 PF08335 GlnD PII-uridylyltransferase H5029_02950 PF01063 Amino-transferase class IV H5029_02965 PF01522 Polysaccharide deacetylase H5029_02970 PF00535 Glycosyl transferase family 2 H5029_02975 PF13439 Glycosyltransferase Family 4 H5029_02975 PF00534 Glycosyl transferases group 1 H5029_03000 PF17102 Stealth protein CR3, conserved region 3 H5029_03000 PF11380 Stealth protein CR2, conserved region 2 H5029_03000 PF17101 Stealth protein CR1, conserved region 1 H5029_03005 PF02938 GAD domain H5029_03005 PF00152 tRNA synthetases class II (D, K and N) H5029_03005 PF01336 OB-fold nucleic acid binding domain H5029_03015 PF00593 TonB dependent receptor H5029_03015 PF07715 TonB-dependent Receptor Plug Domain H5029_03035 PF06146 Phosphate-starvation-inducible E H5029_03040 PF02798 Glutathione S-transferase, N-terminal domain H5029_03040 PF00043 Glutathione S-transferase, C-terminal domain H5029_03045 PF03466 LysR substrate binding domain H5029_03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_03050 PF12806 Acetyl-CoA dehydrogenase C-terminal like H5029_03050 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_03050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_03050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_03055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_03055 PF12806 Acetyl-CoA dehydrogenase C-terminal like H5029_03055 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_03055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_03065 PF00672 HAMP domain H5029_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_03065 PF00512 His Kinase A (phospho-acceptor) domain H5029_03070 PF00072 Response regulator receiver domain H5029_03070 PF00486 Transcriptional regulatory protein, C terminal H5029_03075 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H5029_03095 PF01923 Cobalamin adenosyltransferase H5029_03100 PF07715 TonB-dependent Receptor Plug Domain H5029_03100 PF00593 TonB dependent receptor H5029_03105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H5029_03110 PF00291 Pyridoxal-phosphate dependent enzyme H5029_03135 PF00290 Tryptophan synthase alpha chain H5029_03140 PF01039 Carboxyl transferase domain H5029_03145 PF08245 Mur ligase middle domain H5029_03145 PF02875 Mur ligase family, glutamate ligase domain H5029_03160 PF00753 Metallo-beta-lactamase superfamily H5029_03165 PF00578 AhpC/TSA family H5029_03165 PF10417 C-terminal domain of 1-Cys peroxiredoxin H5029_03170 PF02810 SEC-C motif H5029_03170 PF07516 SecA Wing and Scaffold domain H5029_03170 PF01043 SecA preprotein cross-linking domain H5029_03170 PF07517 SecA DEAD-like domain H5029_03180 PF07690 Major Facilitator Superfamily H5029_03180 PF00083 Sugar (and other) transporter H5029_03185 PF03006 Haemolysin-III related H5029_03210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H5029_03210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H5029_03210 PF00378 Enoyl-CoA hydratase/isomerase H5029_03215 PF00108 Thiolase, N-terminal domain H5029_03215 PF02803 Thiolase, C-terminal domain H5029_03220 PF12833 Helix-turn-helix domain H5029_03220 PF02311 AraC-like ligand binding domain H5029_03225 PF02515 CoA-transferase family III H5029_03230 PF04966 Carbohydrate-selective porin, OprB family H5029_03235 PF01011 PQQ enzyme repeat H5029_03240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H5029_03240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H5029_03250 PF00893 Small Multidrug Resistance protein H5029_03260 PF02803 Thiolase, C-terminal domain H5029_03260 PF00108 Thiolase, N-terminal domain H5029_03270 PF13505 Outer membrane protein beta-barrel domain H5029_03270 PF00691 OmpA family H5029_03280 PF01139 tRNA-splicing ligase RtcB H5029_03285 PF00324 Amino acid permease H5029_03290 PF05175 Methyltransferase small domain H5029_03290 PF08468 Methyltransferase small domain N-terminal H5029_03295 PF00860 Permease family H5029_03300 PF00679 Elongation factor G C-terminus H5029_03300 PF03144 Elongation factor Tu domain 2 H5029_03300 PF00009 Elongation factor Tu GTP binding domain H5029_03305 PF01741 Large-conductance mechanosensitive channel, MscL H5029_03320 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H5029_03320 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H5029_03320 PF06827 Zinc finger found in FPG and IleRS H5029_03325 PF02245 Methylpurine-DNA glycosylase (MPG) H5029_03330 PF00593 TonB dependent receptor H5029_03330 PF07715 TonB-dependent Receptor Plug Domain H5029_03345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H5029_03350 PF03547 Membrane transport protein H5029_03360 PF13098 Thioredoxin-like domain H5029_03360 PF10411 Disulfide bond isomerase protein N-terminus H5029_03365 PF01571 Aminomethyltransferase folate-binding domain H5029_03375 PF04343 Protein of unknown function, DUF488 H5029_03380 PF08274 PhnA Zinc-Ribbon H5029_03380 PF03831 PhnA domain H5029_03385 PF07411 Domain of unknown function (DUF1508) H5029_03390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H5029_03390 PF03129 Anticodon binding domain H5029_03390 PF04073 Aminoacyl-tRNA editing domain H5029_03395 PF00873 AcrB/AcrD/AcrF family H5029_03410 PF00072 Response regulator receiver domain H5029_03415 PF00072 Response regulator receiver domain H5029_03420 PF01584 CheW-like domain H5029_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H5029_03425 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H5029_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_03430 PF01584 CheW-like domain H5029_03430 PF01627 Hpt domain H5029_03430 PF00072 Response regulator receiver domain H5029_03440 PF01546 Peptidase family M20/M25/M40 H5029_03440 PF07687 Peptidase dimerisation domain H5029_03445 PF08085 Entericidin EcnA/B family H5029_03455 PF04304 Protein of unknown function (DUF454) H5029_03460 PF17969 L,D-transpeptidase C-terminal domain H5029_03460 PF03734 L,D-transpeptidase catalytic domain H5029_03500 PF00667 FAD binding domain H5029_03500 PF00258 Flavodoxin H5029_03500 PF00175 Oxidoreductase NAD-binding domain H5029_03510 PF12805 FUSC-like inner membrane protein yccS H5029_03515 PF07690 Major Facilitator Superfamily H5029_03520 PF00881 Nitroreductase family H5029_03535 PF01235 Sodium:alanine symporter family H5029_03540 PF01734 Patatin-like phospholipase H5029_03545 PF00291 Pyridoxal-phosphate dependent enzyme H5029_03545 PF13291 ACT domain H5029_03550 PF05992 SbmA/BacA-like family H5029_03590 PF02637 GatB domain H5029_03590 PF02934 GatB/GatE catalytic domain H5029_03595 PF01425 Amidase H5029_03600 PF02686 Glu-tRNAGln amidotransferase C subunit H5029_03610 PF04085 rod shape-determining protein MreC H5029_03615 PF04093 rod shape-determining protein MreD H5029_03620 PF02545 Maf-like protein H5029_03625 PF00575 S1 RNA binding domain H5029_03625 PF10150 Ribonuclease E/G family H5029_03635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain H5029_03635 PF06974 Protein of unknown function (DUF1298) H5029_03640 PF01507 Phosphoadenosine phosphosulfate reductase family H5029_03655 PF02525 Flavodoxin-like fold H5029_03675 PF02673 Bacitracin resistance protein BacA H5029_03680 PF06719 AraC-type transcriptional regulator N-terminus H5029_03680 PF12833 Helix-turn-helix domain H5029_03685 PF08659 KR domain H5029_03685 PF08240 Alcohol dehydrogenase GroES-like domain H5029_03685 PF08990 Erythronolide synthase docking H5029_03685 PF09277 Erythronolide synthase, docking H5029_03685 PF16197 Ketoacyl-synthetase C-terminal extension H5029_03685 PF00109 Beta-ketoacyl synthase, N-terminal domain H5029_03685 PF14765 Polyketide synthase dehydratase H5029_03685 PF02801 Beta-ketoacyl synthase, C-terminal domain H5029_03685 PF00550 Phosphopantetheine attachment site H5029_03685 PF00698 Acyl transferase domain H5029_03690 PF01965 DJ-1/PfpI family H5029_03700 PF00324 Amino acid permease H5029_03705 PF04303 PrpF protein H5029_03710 PF00348 Polyprenyl synthetase H5029_03715 PF04237 YjbR H5029_03720 PF01145 SPFH domain / Band 7 family H5029_03730 PF01734 Patatin-like phospholipase H5029_03750 PF00884 Sulfatase H5029_03750 PF08019 Phosphoethanolamine transferase EptA/EptB H5029_03755 PF00072 Response regulator receiver domain H5029_03755 PF00486 Transcriptional regulatory protein, C terminal H5029_03760 PF08521 Two-component sensor kinase N-terminal H5029_03760 PF00512 His Kinase A (phospho-acceptor) domain H5029_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_03770 PF00909 Ammonium Transporter Family H5029_03775 PF03466 LysR substrate binding domain H5029_03775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_03795 PF10458 Valyl tRNA synthetase tRNA binding arm H5029_03795 PF00133 tRNA synthetases class I (I, L, M and V) H5029_03795 PF08264 Anticodon-binding domain of tRNA H5029_03815 PF01906 Putative heavy-metal-binding H5029_03820 PF01906 Putative heavy-metal-binding H5029_03825 PF02321 Outer membrane efflux protein H5029_03830 PF00873 AcrB/AcrD/AcrF family H5029_03835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_03835 PF00529 HlyD membrane-fusion protein of T1SS H5029_03840 PF01569 PAP2 superfamily H5029_03850 PF00348 Polyprenyl synthetase H5029_03860 PF00829 Ribosomal prokaryotic L21 protein H5029_03865 PF01016 Ribosomal L27 protein H5029_03870 PF03548 Outer membrane lipoprotein carrier protein LolA H5029_03880 PF02403 Seryl-tRNA synthetase N-terminal domain H5029_03880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H5029_03885 PF14824 Sirohaem biosynthesis protein central H5029_03885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H5029_03885 PF10414 Sirohaem synthase dimerisation region H5029_03890 PF00588 SpoU rRNA Methylase family H5029_03895 PF01638 HxlR-like helix-turn-helix H5029_03900 PF03358 NADPH-dependent FMN reductase H5029_03905 PF13520 Amino acid permease H5029_03910 PF00465 Iron-containing alcohol dehydrogenase H5029_03920 PF03099 Biotin/lipoate A/B protein ligase family H5029_03925 PF04359 Protein of unknown function (DUF493) H5029_03930 PF03979 Sigma-70 factor, region 1.1 H5029_03930 PF04545 Sigma-70, region 4 H5029_03930 PF04539 Sigma-70 region 3 H5029_03930 PF04546 Sigma-70, non-essential region H5029_03930 PF00140 Sigma-70 factor, region 1.2 H5029_03930 PF04542 Sigma-70 region 2 H5029_03950 PF00581 Rhodanese-like domain H5029_03950 PF17773 UPF0176 acylphosphatase like domain H5029_03965 PF00285 Citrate synthase, C-terminal domain H5029_03970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H5029_03975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H5029_03980 PF02910 Fumarate reductase flavoprotein C-term H5029_03980 PF00890 FAD binding domain H5029_03985 PF13085 2Fe-2S iron-sulfur cluster binding domain H5029_04000 PF16078 2-oxoglutarate dehydrogenase N-terminus H5029_04000 PF02779 Transketolase, pyrimidine binding domain H5029_04000 PF16870 2-oxoglutarate dehydrogenase C-terminal H5029_04000 PF00676 Dehydrogenase E1 component H5029_04005 PF02817 e3 binding domain H5029_04005 PF00364 Biotin-requiring enzyme H5029_04005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H5029_04010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5029_04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_04015 PF00549 CoA-ligase H5029_04015 PF08442 ATP-grasp domain H5029_04020 PF00549 CoA-ligase H5029_04020 PF02629 CoA binding domain H5029_04025 PF00579 tRNA synthetases class I (W and Y) H5029_04030 PF05661 Protein of unknown function (DUF808) H5029_04035 PF04228 Putative neutral zinc metallopeptidase H5029_04040 PF00999 Sodium/hydrogen exchanger family H5029_04070 PF09587 Bacterial capsule synthesis protein PGA_cap H5029_04080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H5029_04085 PF00582 Universal stress protein family H5029_04090 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_04095 PF03449 Transcription elongation factor, N-terminal H5029_04095 PF01272 Transcription elongation factor, GreA/GreB, C-term H5029_04100 PF02142 MGS-like domain H5029_04100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H5029_04100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H5029_04105 PF00117 Glutamine amidotransferase class-I H5029_04105 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H5029_04120 PF01985 CRS1 / YhbY (CRM) domain H5029_04125 PF01728 FtsJ-like methyltransferase H5029_04130 PF00004 ATPase family associated with various cellular activities (AAA) H5029_04130 PF06480 FtsH Extracellular H5029_04130 PF17862 AAA+ lid domain H5029_04130 PF01434 Peptidase family M41 H5029_04135 PF00809 Pterin binding enzyme H5029_04155 PF16655 PhoD-like phosphatase, N-terminal domain H5029_04155 PF09423 PhoD-like phosphatase H5029_04170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H5029_04170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H5029_04185 PF00083 Sugar (and other) transporter H5029_04190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H5029_04190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H5029_04195 PF01266 FAD dependent oxidoreductase H5029_04195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H5029_04200 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain H5029_04200 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain H5029_04205 PF00781 Diacylglycerol kinase catalytic domain H5029_04210 PF00149 Calcineurin-like phosphoesterase H5029_04220 PF13936 Helix-turn-helix domain H5029_04220 PF00665 Integrase core domain H5029_04230 PF00166 Chaperonin 10 Kd subunit H5029_04235 PF00118 TCP-1/cpn60 chaperonin family H5029_04240 PF01219 Prokaryotic diacylglycerol kinase H5029_04250 PF03009 Glycerophosphoryl diester phosphodiesterase family H5029_04255 PF00873 AcrB/AcrD/AcrF family H5029_04265 PF01435 Peptidase family M48 H5029_04270 PF01464 Transglycosylase SLT domain H5029_04275 PF01171 PP-loop family H5029_04285 PF00497 Bacterial extracellular solute-binding proteins, family 3 H5029_04285 PF01464 Transglycosylase SLT domain H5029_04290 PF01272 Transcription elongation factor, GreA/GreB, C-term H5029_04290 PF03449 Transcription elongation factor, N-terminal H5029_04305 PF13193 AMP-binding enzyme C-terminal domain H5029_04305 PF00550 Phosphopantetheine attachment site H5029_04305 PF00975 Thioesterase domain H5029_04305 PF00501 AMP-binding enzyme H5029_04305 PF00668 Condensation domain H5029_04330 PF00881 Nitroreductase family H5029_04345 PF02595 Glycerate kinase family H5029_04350 PF00384 Molybdopterin oxidoreductase H5029_04355 PF02634 FdhD/NarQ family H5029_04360 PF06803 Protein of unknown function (DUF1232) H5029_04365 PF11890 Domain of unknown function (DUF3410) H5029_04365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H5029_04365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5029_04370 PF00152 tRNA synthetases class II (D, K and N) H5029_04380 PF18073 Rubredoxin metal binding domain H5029_04385 PF00324 Amino acid permease H5029_04395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H5029_04395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H5029_04400 PF01678 Diaminopimelate epimerase H5029_04405 PF01810 LysE type translocator H5029_04410 PF00589 Phage integrase family H5029_04410 PF02899 Phage integrase, N-terminal SAM-like domain H5029_04415 PF01012 Electron transfer flavoprotein domain H5029_04420 PF00766 Electron transfer flavoprotein FAD-binding domain H5029_04420 PF01012 Electron transfer flavoprotein domain H5029_04425 PF00521 DNA gyrase/topoisomerase IV, subunit A H5029_04425 PF03989 DNA gyrase C-terminal domain, beta-propeller H5029_04440 PF00535 Glycosyl transferase family 2 H5029_04460 PF13533 Biotin-lipoyl like H5029_04470 PF00266 Aminotransferase class-V H5029_04485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H5029_04495 PF02687 FtsX-like permease family H5029_04495 PF12704 MacB-like periplasmic core domain H5029_04500 PF00005 ABC transporter H5029_04505 PF00753 Metallo-beta-lactamase superfamily H5029_04505 PF13567 Domain of unknown function (DUF4131) H5029_04505 PF03772 Competence protein H5029_04515 PF01343 Peptidase family S49 H5029_04515 PF06965 Na+/H+ antiporter 1 H5029_04520 PF12697 Alpha/beta hydrolase family H5029_04525 PF00551 Formyl transferase H5029_04530 PF02769 AIR synthase related protein, C-terminal domain H5029_04530 PF00586 AIR synthase related protein, N-terminal domain H5029_04535 PF01594 AI-2E family transporter H5029_04540 PF00308 Bacterial dnaA protein H5029_04540 PF11638 DnaA N-terminal domain H5029_04540 PF08299 Bacterial dnaA protein helix-turn-helix H5029_04570 PF00588 SpoU rRNA Methylase family H5029_04570 PF08032 RNA 2'-O ribose methyltransferase substrate binding H5029_04575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H5029_04585 PF00691 OmpA family H5029_04590 PF04052 TolB amino-terminal domain H5029_04590 PF07676 WD40-like Beta Propeller Repeat H5029_04600 PF02472 Biopolymer transport protein ExbD/TolR H5029_04605 PF01618 MotA/TolQ/ExbB proton channel family H5029_04610 PF03061 Thioesterase superfamily H5029_04615 PF07687 Peptidase dimerisation domain H5029_04615 PF01546 Peptidase family M20/M25/M40 H5029_04620 PF17864 RuvB AAA lid domain H5029_04620 PF05491 RuvB C-terminal winged helix domain H5029_04620 PF05496 Holliday junction DNA helicase RuvB P-loop domain H5029_04625 PF07499 RuvA, C-terminal domain H5029_04625 PF01330 RuvA N terminal domain H5029_04630 PF01966 HD domain H5029_04635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H5029_04635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H5029_04635 PF02769 AIR synthase related protein, C-terminal domain H5029_04640 PF07690 Major Facilitator Superfamily H5029_04645 PF01784 NIF3 (NGG1p interacting factor 3) H5029_04650 PF00378 Enoyl-CoA hydratase/isomerase H5029_04655 PF00293 NUDIX domain H5029_04655 PF01467 Cytidylyltransferase-like H5029_04665 PF00578 AhpC/TSA family H5029_04680 PF06508 Queuosine biosynthesis protein QueC H5029_04690 PF14602 Hexapeptide repeat of succinyl-transferase H5029_04690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H5029_04690 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_04705 PF03466 LysR substrate binding domain H5029_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_04710 PF12857 TOBE-like domain H5029_04710 PF00005 ABC transporter H5029_04715 PF00528 Binding-protein-dependent transport system inner membrane component H5029_04720 PF00528 Binding-protein-dependent transport system inner membrane component H5029_04735 PF01063 Amino-transferase class IV H5029_04740 PF02618 YceG-like family H5029_04745 PF02223 Thymidylate kinase H5029_04755 PF02910 Fumarate reductase flavoprotein C-term H5029_04755 PF00890 FAD binding domain H5029_04760 PF13180 PDZ domain H5029_04770 PF06421 GTP-binding protein LepA C-terminus H5029_04770 PF03144 Elongation factor Tu domain 2 H5029_04770 PF00009 Elongation factor Tu GTP binding domain H5029_04770 PF00679 Elongation factor G C-terminus H5029_04775 PF10502 Signal peptidase, peptidase S26 H5029_04785 PF00035 Double-stranded RNA binding motif H5029_04785 PF14622 Ribonuclease-III-like H5029_04790 PF07650 KH domain H5029_04790 PF01926 50S ribosome-binding GTPase H5029_04800 PF11967 Recombination protein O N terminal H5029_04800 PF02565 Recombination protein O C terminal H5029_04805 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H5029_04810 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H5029_04815 PF00106 short chain dehydrogenase H5029_04845 PF00155 Aminotransferase class I and II H5029_04855 PF17151 Periplasmic sensor domain H5029_04855 PF00990 Diguanylate cyclase, GGDEF domain H5029_04865 PF00271 Helicase conserved C-terminal domain H5029_04865 PF04851 Type III restriction enzyme, res subunit H5029_04865 PF02151 UvrB/uvrC motif H5029_04865 PF12344 Ultra-violet resistance protein B H5029_04865 PF17757 UvrB interaction domain H5029_04875 PF00892 EamA-like transporter family H5029_04880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H5029_04880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H5029_04895 PF01926 50S ribosome-binding GTPase H5029_04895 PF01018 GTP1/OBG H5029_04900 PF00696 Amino acid kinase family H5029_04900 PF01472 PUA domain H5029_04910 PF07759 Protein of unknown function (DUF1615) H5029_04915 PF01207 Dihydrouridine synthase (Dus) H5029_04920 PF03060 Nitronate monooxygenase H5029_04935 PF02350 UDP-N-acetylglucosamine 2-epimerase H5029_04965 PF00875 DNA photolyase H5029_04965 PF03441 FAD binding domain of DNA photolyase H5029_04970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H5029_04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_04980 PF00768 D-alanyl-D-alanine carboxypeptidase H5029_04980 PF07943 Penicillin-binding protein 5, C-terminal domain H5029_04990 PF03971 Monomeric isocitrate dehydrogenase H5029_04995 PF00849 RNA pseudouridylate synthase H5029_05000 PF00180 Isocitrate/isopropylmalate dehydrogenase H5029_05020 PF06779 Uncharacterised MFS-type transporter YbfB H5029_05025 PF03466 LysR substrate binding domain H5029_05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_05030 PF00375 Sodium:dicarboxylate symporter family H5029_05035 PF02567 Phenazine biosynthesis-like protein H5029_05040 PF05193 Peptidase M16 inactive domain H5029_05040 PF00675 Insulinase (Peptidase family M16) H5029_05065 PF02581 Thiamine monophosphate synthase H5029_05070 PF00202 Aminotransferase class-III H5029_05080 PF00849 RNA pseudouridylate synthase H5029_05085 PF18337 RapA N-terminal Tudor like domain H5029_05085 PF00271 Helicase conserved C-terminal domain H5029_05085 PF18339 RapA N-terminal Tudor like domain 1 H5029_05085 PF00176 SNF2 family N-terminal domain H5029_05085 PF12137 RNA polymerase recycling family C-terminal H5029_05095 PF00440 Bacterial regulatory proteins, tetR family H5029_05100 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_05100 PF00175 Oxidoreductase NAD-binding domain H5029_05100 PF00970 Oxidoreductase FAD-binding domain H5029_05105 PF00487 Fatty acid desaturase H5029_05115 PF17754 MftR C-terminal domain H5029_05115 PF00440 Bacterial regulatory proteins, tetR family H5029_05125 PF00202 Aminotransferase class-III H5029_05130 PF00282 Pyridoxal-dependent decarboxylase conserved domain H5029_05135 PF00171 Aldehyde dehydrogenase family H5029_05140 PF01037 Lrp/AsnC ligand binding domain H5029_05145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H5029_05145 PF00205 Thiamine pyrophosphate enzyme, central domain H5029_05145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H5029_05150 PF00324 Amino acid permease H5029_05155 PF12849 PBP superfamily domain H5029_05160 PF00528 Binding-protein-dependent transport system inner membrane component H5029_05165 PF00528 Binding-protein-dependent transport system inner membrane component H5029_05170 PF00005 ABC transporter H5029_05175 PF01343 Peptidase family S49 H5029_05175 PF08496 Peptidase family S49 N-terminal H5029_05185 PF00872 Transposase, Mutator family H5029_05195 PF00206 Lyase H5029_05195 PF08328 Adenylosuccinate lyase C-terminal H5029_05200 PF04356 Protein of unknown function (DUF489) H5029_05210 PF13344 Haloacid dehalogenase-like hydrolase H5029_05210 PF00293 NUDIX domain H5029_05215 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_05220 PF00768 D-alanyl-D-alanine carboxypeptidase H5029_05220 PF07943 Penicillin-binding protein 5, C-terminal domain H5029_05235 PF01975 Survival protein SurE H5029_05240 PF01476 LysM domain H5029_05240 PF01551 Peptidase family M23 H5029_05245 PF03466 LysR substrate binding domain H5029_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_05250 PF13654 AAA domain H5029_05250 PF05362 Lon protease (S16) C-terminal proteolytic domain H5029_05255 PF07690 Major Facilitator Superfamily H5029_05260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H5029_05265 PF13593 SBF-like CPA transporter family (DUF4137) H5029_05270 PF01197 Ribosomal protein L31 H5029_05285 PF04055 Radical SAM superfamily H5029_05290 PF01132 Elongation factor P (EF-P) OB domain H5029_05290 PF08207 Elongation factor P (EF-P) KOW-like domain H5029_05290 PF09285 Elongation factor P, C-terminal H5029_05295 PF02554 Carbon starvation protein CstA H5029_05295 PF13722 5TM C-terminal transporter carbon starvation CstA H5029_05300 PF04328 Selenoprotein, putative H5029_05330 PF06018 CodY GAF-like domain H5029_05330 PF17853 GGDEF-like domain H5029_05330 PF13556 PucR C-terminal helix-turn-helix domain H5029_05345 PF00171 Aldehyde dehydrogenase family H5029_05350 PF00324 Amino acid permease H5029_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_05360 PF03466 LysR substrate binding domain H5029_05365 PF02028 BCCT, betaine/carnitine/choline family transporter H5029_05370 PF02028 BCCT, betaine/carnitine/choline family transporter H5029_05375 PF00355 Rieske [2Fe-2S] domain H5029_05375 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H5029_05380 PF00171 Aldehyde dehydrogenase family H5029_05385 PF18113 Rubredoxin binding C-terminal domain H5029_05385 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_05390 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H5029_05390 PF01266 FAD dependent oxidoreductase H5029_05410 PF00892 EamA-like transporter family H5029_05420 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system H5029_05425 PF00083 Sugar (and other) transporter H5029_05430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H5029_05430 PF13378 Enolase C-terminal domain-like H5029_05435 PF16197 Ketoacyl-synthetase C-terminal extension H5029_05435 PF08240 Alcohol dehydrogenase GroES-like domain H5029_05435 PF08990 Erythronolide synthase docking H5029_05435 PF00109 Beta-ketoacyl synthase, N-terminal domain H5029_05435 PF09277 Erythronolide synthase, docking H5029_05435 PF00550 Phosphopantetheine attachment site H5029_05435 PF08659 KR domain H5029_05435 PF02801 Beta-ketoacyl synthase, C-terminal domain H5029_05435 PF14765 Polyketide synthase dehydratase H5029_05435 PF00698 Acyl transferase domain H5029_05440 PF00440 Bacterial regulatory proteins, tetR family H5029_05460 PF17954 Quercetinase C-terminal cupin domain H5029_05460 PF02678 Pirin H5029_05470 PF08348 YheO-like PAS domain H5029_05470 PF13309 HTH domain H5029_05480 PF00501 AMP-binding enzyme H5029_05480 PF13193 AMP-binding enzyme C-terminal domain H5029_05480 PF00668 Condensation domain H5029_05480 PF00550 Phosphopantetheine attachment site H5029_05485 PF13193 AMP-binding enzyme C-terminal domain H5029_05485 PF00501 AMP-binding enzyme H5029_05485 PF00668 Condensation domain H5029_05485 PF00975 Thioesterase domain H5029_05485 PF00550 Phosphopantetheine attachment site H5029_05490 PF01032 FecCD transport family H5029_05495 PF01032 FecCD transport family H5029_05500 PF00005 ABC transporter H5029_05505 PF01497 Periplasmic binding protein H5029_05510 PF07715 TonB-dependent Receptor Plug Domain H5029_05510 PF00593 TonB dependent receptor H5029_05515 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H5029_05520 PF00550 Phosphopantetheine attachment site H5029_05520 PF00668 Condensation domain H5029_05520 PF00501 AMP-binding enzyme H5029_05525 PF00501 AMP-binding enzyme H5029_05525 PF13193 AMP-binding enzyme C-terminal domain H5029_05530 PF00550 Phosphopantetheine attachment site H5029_05530 PF00857 Isochorismatase family H5029_05535 PF00282 Pyridoxal-dependent decarboxylase conserved domain H5029_05545 PF00005 ABC transporter H5029_05550 PF00005 ABC transporter H5029_05555 PF00975 Thioesterase domain H5029_05565 PF00425 chorismate binding enzyme H5029_05575 PF01208 Uroporphyrinogen decarboxylase (URO-D) H5029_05580 PF05675 Protein of unknown function (DUF817) H5029_05595 PF00144 Beta-lactamase H5029_05605 PF01227 GTP cyclohydrolase I H5029_05610 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_05610 PF01799 [2Fe-2S] binding domain H5029_05615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H5029_05615 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H5029_05630 PF00218 Indole-3-glycerol phosphate synthase H5029_05635 PF00591 Glycosyl transferase family, a/b domain H5029_05635 PF02885 Glycosyl transferase family, helical bundle domain H5029_05640 PF07715 TonB-dependent Receptor Plug Domain H5029_05640 PF00593 TonB dependent receptor H5029_05645 PF11838 ERAP1-like C-terminal domain H5029_05645 PF01433 Peptidase family M1 domain H5029_05650 PF00117 Glutamine amidotransferase class-I H5029_05660 PF00854 POT family H5029_05665 PF03951 Glutamine synthetase, beta-Grasp domain H5029_05665 PF00120 Glutamine synthetase, catalytic domain H5029_05670 PF04345 Chorismate lyase H5029_05675 PF01040 UbiA prenyltransferase family H5029_05710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H5029_05710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H5029_05715 PF01784 NIF3 (NGG1p interacting factor 3) H5029_05720 PF13180 PDZ domain H5029_05725 PF12627 Probable RNA and SrmB- binding site of polymerase A H5029_05725 PF01743 Poly A polymerase head domain H5029_05730 PF01515 Phosphate acetyl/butaryl transferase H5029_05730 PF03949 Malic enzyme, NAD binding domain H5029_05730 PF00390 Malic enzyme, N-terminal domain H5029_05735 PF03707 Bacterial signalling protein N terminal repeat H5029_05735 PF00563 EAL domain H5029_05735 PF00990 Diguanylate cyclase, GGDEF domain H5029_05740 PF04452 RNA methyltransferase H5029_05745 PF02219 Methylenetetrahydrofolate reductase H5029_05750 PF05221 S-adenosyl-L-homocysteine hydrolase H5029_05750 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H5029_05765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_05765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_05765 PF09317 Domain of unknown function (DUF1974) H5029_05770 PF04055 Radical SAM superfamily H5029_05775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5029_05775 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_05785 PF07690 Major Facilitator Superfamily H5029_05795 PF00557 Metallopeptidase family M24 H5029_05800 PF00318 Ribosomal protein S2 H5029_05805 PF00889 Elongation factor TS H5029_05815 PF12833 Helix-turn-helix domain H5029_05835 PF03330 Lytic transglycolase H5029_05835 PF05036 Sporulation related domain H5029_05840 PF13406 Transglycosylase SLT domain H5029_05845 PF01098 Cell cycle protein H5029_05855 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H5029_05855 PF14489 QueF-like protein H5029_05860 PF01061 ABC-2 type transporter H5029_05865 PF00005 ABC transporter H5029_05895 PF00464 Serine hydroxymethyltransferase H5029_05900 PF02321 Outer membrane efflux protein H5029_05905 PF00873 AcrB/AcrD/AcrF family H5029_05910 PF13533 Biotin-lipoyl like H5029_05915 PF03466 LysR substrate binding domain H5029_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_05920 PF00497 Bacterial extracellular solute-binding proteins, family 3 H5029_05925 PF00528 Binding-protein-dependent transport system inner membrane component H5029_05930 PF00528 Binding-protein-dependent transport system inner membrane component H5029_05935 PF00005 ABC transporter H5029_05940 PF00893 Small Multidrug Resistance protein H5029_05945 PF00037 4Fe-4S binding domain H5029_05950 PF16325 Peptidase family U32 C-terminal domain H5029_05950 PF01136 Peptidase family U32 H5029_05955 PF00155 Aminotransferase class I and II H5029_05955 PF00392 Bacterial regulatory proteins, gntR family H5029_05960 PF02567 Phenazine biosynthesis-like protein H5029_05965 PF00175 Oxidoreductase NAD-binding domain H5029_05965 PF00970 Oxidoreductase FAD-binding domain H5029_05970 PF01980 tRNA-methyltransferase O H5029_05970 PF18389 TrmO C-terminal domain H5029_05980 PF00437 Type II/IV secretion system protein H5029_05980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H5029_05990 PF00486 Transcriptional regulatory protein, C terminal H5029_05990 PF00072 Response regulator receiver domain H5029_05995 PF00512 His Kinase A (phospho-acceptor) domain H5029_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_05995 PF08521 Two-component sensor kinase N-terminal H5029_06005 PF00293 NUDIX domain H5029_06015 PF00905 Penicillin binding protein transpeptidase domain H5029_06015 PF00912 Transglycosylase H5029_06015 PF14814 Bifunctional transglycosylase second domain H5029_06020 PF01513 ATP-NAD kinase H5029_06025 PF07023 Protein of unknown function (DUF1315) H5029_06030 PF00591 Glycosyl transferase family, a/b domain H5029_06030 PF02885 Glycosyl transferase family, helical bundle domain H5029_06035 PF00375 Sodium:dicarboxylate symporter family H5029_06040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_06040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_06040 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_06045 PF00756 Putative esterase H5029_06050 PF01842 ACT domain H5029_06050 PF01817 Chorismate mutase type II H5029_06050 PF00800 Prephenate dehydratase H5029_06055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H5029_06065 PF01546 Peptidase family M20/M25/M40 H5029_06065 PF07687 Peptidase dimerisation domain H5029_06070 PF12706 Beta-lactamase superfamily domain H5029_06080 PF03883 Peroxide stress protein YaaA H5029_06090 PF05690 Thiazole biosynthesis protein ThiG H5029_06100 PF04241 Protein of unknown function (DUF423) H5029_06105 PF04545 Sigma-70, region 4 H5029_06105 PF04542 Sigma-70 region 2 H5029_06105 PF00140 Sigma-70 factor, region 1.2 H5029_06115 PF00313 'Cold-shock' DNA-binding domain H5029_06120 PF00271 Helicase conserved C-terminal domain H5029_06120 PF00270 DEAD/DEAH box helicase H5029_06130 PF00881 Nitroreductase family H5029_06135 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H5029_06135 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H5029_06155 PF01180 Dihydroorotate dehydrogenase H5029_06160 PF02674 Colicin V production protein H5029_06165 PF00156 Phosphoribosyl transferase domain H5029_06180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5029_06180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H5029_06185 PF01435 Peptidase family M48 H5029_06190 PF09424 Yqey-like protein H5029_06195 PF01165 Ribosomal protein S21 H5029_06200 PF00814 Glycoprotease family H5029_06220 PF00069 Protein kinase domain H5029_06245 PF03466 LysR substrate binding domain H5029_06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_06250 PF00202 Aminotransferase class-III H5029_06255 PF00171 Aldehyde dehydrogenase family H5029_06260 PF00324 Amino acid permease H5029_06290 PF04076 Bacterial OB fold (BOF) protein H5029_06315 PF00561 alpha/beta hydrolase fold H5029_06320 PF03616 Sodium/glutamate symporter H5029_06330 PF07729 FCD domain H5029_06330 PF00392 Bacterial regulatory proteins, gntR family H5029_06380 PF08946 Osmosensory transporter coiled coil H5029_06380 PF00083 Sugar (and other) transporter H5029_06400 PF00155 Aminotransferase class I and II H5029_06405 PF06826 Predicted Permease Membrane Region H5029_06405 PF02080 TrkA-C domain H5029_06415 PF04403 Paraquat-inducible protein A H5029_06420 PF02470 MlaD protein H5029_06430 PF01177 Asp/Glu/Hydantoin racemase H5029_06435 PF13610 DDE domain H5029_06445 PF07995 Glucose / Sorbosone dehydrogenase H5029_06450 PF00892 EamA-like transporter family H5029_06455 PF13610 DDE domain H5029_06465 PF01636 Phosphotransferase enzyme family H5029_06470 PF13610 DDE domain H5029_06485 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_06490 PF13427 Domain of unknown function (DUF4111) H5029_06490 PF01909 Nucleotidyltransferase domain H5029_06495 PF00893 Small Multidrug Resistance protein H5029_06500 PF00809 Pterin binding enzyme H5029_06515 PF07091 Ribosomal RNA methyltransferase (FmrO) H5029_06535 PF00005 ABC transporter H5029_06535 PF12848 ABC transporter H5029_06540 PF01636 Phosphotransferase enzyme family H5029_06550 PF13817 IS66 C-terminal element H5029_06550 PF13007 Transposase C of IS166 homeodomain H5029_06550 PF13005 zinc-finger binding domain of transposase IS66 H5029_06550 PF03050 Transposase IS66 family H5029_06570 PF01051 Initiator Replication protein H5029_06575 PF13610 DDE domain H5029_06590 PF00375 Sodium:dicarboxylate symporter family H5029_06600 PF00753 Metallo-beta-lactamase superfamily H5029_06600 PF16123 Hydroxyacylglutathione hydrolase C-terminus H5029_06605 PF00528 Binding-protein-dependent transport system inner membrane component H5029_06610 PF09383 NIL domain H5029_06610 PF00005 ABC transporter H5029_06615 PF03180 NLPA lipoprotein H5029_06620 PF02843 Phosphoribosylglycinamide synthetase, C domain H5029_06620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H5029_06620 PF02844 Phosphoribosylglycinamide synthetase, N domain H5029_06625 PF01808 AICARFT/IMPCHase bienzyme H5029_06625 PF02142 MGS-like domain H5029_06630 PF02954 Bacterial regulatory protein, Fis family H5029_06650 PF01134 Glucose inhibited division protein A H5029_06650 PF13932 GidA associated domain H5029_06660 PF14403 Circularly permuted ATP-grasp type 2 H5029_06670 PF01841 Transglutaminase-like superfamily H5029_06670 PF08379 Bacterial transglutaminase-like N-terminal region H5029_06680 PF01168 Alanine racemase, N-terminal domain H5029_06680 PF00842 Alanine racemase, C-terminal domain H5029_06685 PF03796 DnaB-like helicase C terminal domain H5029_06685 PF00772 DnaB-like helicase N terminal domain H5029_06690 PF01281 Ribosomal protein L9, N-terminal domain H5029_06690 PF03948 Ribosomal protein L9, C-terminal domain H5029_06695 PF01084 Ribosomal protein S18 H5029_06700 PF01250 Ribosomal protein S6 H5029_06705 PF01040 UbiA prenyltransferase family H5029_06710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H5029_06715 PF00510 Cytochrome c oxidase subunit III H5029_06720 PF00115 Cytochrome C and Quinol oxidase polypeptide I H5029_06725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H5029_06725 PF06481 COX Aromatic Rich Motif H5029_06735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H5029_06735 PF02896 PEP-utilising enzyme, TIM barrel domain H5029_06735 PF00391 PEP-utilising enzyme, mobile domain H5029_06740 PF03618 Kinase/pyrophosphorylase H5029_06750 PF14883 Hypothetical glycosyl hydrolase family 13 H5029_06750 PF01522 Polysaccharide deacetylase H5029_06755 PF00535 Glycosyl transferase family 2 H5029_06760 PF13994 PgaD-like protein H5029_06770 PF00296 Luciferase-like monooxygenase H5029_06785 PF03466 LysR substrate binding domain H5029_06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_06795 PF00472 RF-1 domain H5029_06795 PF03462 PCRF domain H5029_06800 PF13847 Methyltransferase domain H5029_06800 PF17827 PrmC N-terminal domain H5029_06805 PF00528 Binding-protein-dependent transport system inner membrane component H5029_06810 PF09084 NMT1/THI5 like H5029_06815 PF12833 Helix-turn-helix domain H5029_06820 PF00106 short chain dehydrogenase H5029_06825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_06825 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_06825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_06830 PF00501 AMP-binding enzyme H5029_06830 PF13193 AMP-binding enzyme C-terminal domain H5029_06835 PF01613 Flavin reductase like domain H5029_06840 PF00899 ThiF family H5029_06845 PF03109 ABC1 family H5029_06860 PF03814 Potassium-transporting ATPase A subunit H5029_06870 PF02669 K+-transporting ATPase, c chain H5029_06875 PF00512 His Kinase A (phospho-acceptor) domain H5029_06875 PF13493 Domain of unknown function (DUF4118) H5029_06875 PF02702 Osmosensitive K+ channel His kinase sensor domain H5029_06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_06880 PF00072 Response regulator receiver domain H5029_06880 PF00486 Transcriptional regulatory protein, C terminal H5029_06885 PF00120 Glutamine synthetase, catalytic domain H5029_06895 PF03232 Ubiquinone biosynthesis protein COQ7 H5029_06900 PF07690 Major Facilitator Superfamily H5029_06905 PF01103 Surface antigen H5029_06905 PF07244 Surface antigen variable number repeat H5029_06905 PF17243 POTRA domain TamA domain 1 H5029_06920 PF00330 Aconitase family (aconitate hydratase) H5029_06920 PF06434 Aconitate hydratase 2 N-terminus H5029_06920 PF11791 Aconitate B N-terminal domain H5029_06930 PF00027 Cyclic nucleotide-binding domain H5029_06930 PF00520 Ion transport protein H5029_06935 PF07690 Major Facilitator Superfamily H5029_06950 PF03466 LysR substrate binding domain H5029_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_06955 PF04284 Protein of unknown function (DUF441) H5029_06965 PF01479 S4 domain H5029_06965 PF00849 RNA pseudouridylate synthase H5029_06980 PF00849 RNA pseudouridylate synthase H5029_06980 PF01479 S4 domain H5029_06985 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H5029_06990 PF08676 MutL C terminal dimerisation domain H5029_06990 PF01119 DNA mismatch repair protein, C-terminal domain H5029_07000 PF17209 Hfq protein H5029_07010 PF00881 Nitroreductase family H5029_07020 PF00149 Calcineurin-like phosphoesterase H5029_07025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H5029_07030 PF00749 tRNA synthetases class I (E and Q), catalytic domain H5029_07030 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H5029_07035 PF02540 NAD synthase H5029_07035 PF00117 Glutamine amidotransferase class-I H5029_07035 PF00958 GMP synthase C terminal domain H5029_07040 PF05985 Ethanolamine ammonia-lyase light chain (EutC) H5029_07045 PF06751 Ethanolamine ammonia lyase large subunit (EutB) H5029_07050 PF13520 Amino acid permease H5029_07055 PF00171 Aldehyde dehydrogenase family H5029_07070 PF00465 Iron-containing alcohol dehydrogenase H5029_07075 PF14493 Helix-turn-helix domain H5029_07075 PF05970 PIF1-like helicase H5029_07085 PF06445 GyrI-like small molecule binding domain H5029_07090 PF02110 Hydroxyethylthiazole kinase family H5029_07105 PF01433 Peptidase family M1 domain H5029_07105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H5029_07105 PF11940 Domain of unknown function (DUF3458) Ig-like fold H5029_07135 PF01817 Chorismate mutase type II H5029_07140 PF01037 Lrp/AsnC ligand binding domain H5029_07150 PF00440 Bacterial regulatory proteins, tetR family H5029_07155 PF00593 TonB dependent receptor H5029_07155 PF07715 TonB-dependent Receptor Plug Domain H5029_07160 PF00924 Mechanosensitive ion channel H5029_07200 PF00593 TonB dependent receptor H5029_07200 PF07715 TonB-dependent Receptor Plug Domain H5029_07220 PF12848 ABC transporter H5029_07220 PF00005 ABC transporter H5029_07225 PF00582 Universal stress protein family H5029_07250 PF00689 Cation transporting ATPase, C-terminus H5029_07250 PF00690 Cation transporter/ATPase, N-terminus H5029_07255 PF02308 MgtC family H5029_07260 PF03594 Benzoate membrane transport protein H5029_07265 PF01037 Lrp/AsnC ligand binding domain H5029_07270 PF01810 LysE type translocator H5029_07275 PF00923 Transaldolase/Fructose-6-phosphate aldolase H5029_07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_07280 PF03466 LysR substrate binding domain H5029_07290 PF00108 Thiolase, N-terminal domain H5029_07290 PF02803 Thiolase, C-terminal domain H5029_07300 PF01575 MaoC like domain H5029_07305 PF00144 Beta-lactamase H5029_07315 PF07690 Major Facilitator Superfamily H5029_07320 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H5029_07320 PF12169 DNA polymerase III subunits gamma and tau domain III H5029_07320 PF12170 DNA polymerase III tau subunit V interacting with alpha H5029_07330 PF04185 Phosphoesterase family H5029_07330 PF05506 Domain of unknown function (DUF756) H5029_07335 PF03061 Thioesterase superfamily H5029_07340 PF00465 Iron-containing alcohol dehydrogenase H5029_07350 PF01451 Low molecular weight phosphotyrosine protein phosphatase H5029_07355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H5029_07355 PF01565 FAD binding domain H5029_07370 PF01645 Conserved region in glutamate synthase H5029_07390 PF12832 MFS_1 like family H5029_07400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H5029_07400 PF00289 Biotin carboxylase, N-terminal domain H5029_07400 PF02785 Biotin carboxylase C-terminal domain H5029_07405 PF00364 Biotin-requiring enzyme H5029_07410 PF01220 Dehydroquinase class II H5029_07415 PF00817 impB/mucB/samB family H5029_07415 PF13438 Domain of unknown function (DUF4113) H5029_07415 PF11799 impB/mucB/samB family C-terminal domain H5029_07425 PF00005 ABC transporter H5029_07430 PF00072 Response regulator receiver domain H5029_07430 PF00486 Transcriptional regulatory protein, C terminal H5029_07440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H5029_07440 PF04324 BFD-like [2Fe-2S] binding domain H5029_07440 PF18267 Rubredoxin NAD+ reductase C-terminal domain H5029_07440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H5029_07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_07440 PF13806 Rieske-like [2Fe-2S] domain H5029_07445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H5029_07445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H5029_07445 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_07445 PF18267 Rubredoxin NAD+ reductase C-terminal domain H5029_07445 PF04324 BFD-like [2Fe-2S] binding domain H5029_07450 PF00384 Molybdopterin oxidoreductase H5029_07450 PF01568 Molydopterin dinucleotide binding domain H5029_07450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H5029_07450 PF04324 BFD-like [2Fe-2S] binding domain H5029_07455 PF12804 MobA-like NTP transferase domain H5029_07460 PF01568 Molydopterin dinucleotide binding domain H5029_07460 PF00384 Molybdopterin oxidoreductase H5029_07460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H5029_07465 PF06463 Molybdenum Cofactor Synthesis C H5029_07465 PF04055 Radical SAM superfamily H5029_07475 PF02391 MoaE protein H5029_07480 PF00994 Probable molybdopterin binding domain H5029_07480 PF01967 MoaC family H5029_07485 PF00994 Probable molybdopterin binding domain H5029_07485 PF03454 MoeA C-terminal region (domain IV) H5029_07485 PF03453 MoeA N-terminal region (domain I and II) H5029_07490 PF01638 HxlR-like helix-turn-helix H5029_07495 PF00392 Bacterial regulatory proteins, gntR family H5029_07495 PF00155 Aminotransferase class I and II H5029_07500 PF00892 EamA-like transporter family H5029_07520 PF02635 DsrE/DsrF-like family H5029_07525 PF16363 GDP-mannose 4,6 dehydratase H5029_07530 PF00206 Lyase H5029_07530 PF10415 Fumarase C C-terminus H5029_07550 PF01266 FAD dependent oxidoreductase H5029_07560 PF02542 YgbB family H5029_07570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H5029_07570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H5029_07575 PF00440 Bacterial regulatory proteins, tetR family H5029_07580 PF00072 Response regulator receiver domain H5029_07580 PF02954 Bacterial regulatory protein, Fis family H5029_07580 PF00158 Sigma-54 interaction domain H5029_07585 PF00989 PAS fold H5029_07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_07585 PF00512 His Kinase A (phospho-acceptor) domain H5029_07590 PF18693 TRAM domain H5029_07590 PF00919 Uncharacterized protein family UPF0004 H5029_07590 PF04055 Radical SAM superfamily H5029_07595 PF00696 Amino acid kinase family H5029_07600 PF01765 Ribosome recycling factor H5029_07605 PF01255 Putative undecaprenyl diphosphate synthase H5029_07615 PF13288 DXP reductoisomerase C-terminal domain H5029_07615 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H5029_07615 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H5029_07620 PF02163 Peptidase family M50 H5029_07620 PF17820 PDZ domain H5029_07620 PF13180 PDZ domain H5029_07625 PF01103 Surface antigen H5029_07625 PF07244 Surface antigen variable number repeat H5029_07635 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H5029_07635 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_07640 PF07977 FabA-like domain H5029_07645 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_07645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H5029_07660 PF02631 RecX family H5029_07665 PF00154 recA bacterial DNA recombination protein H5029_07670 PF01479 S4 domain H5029_07675 PF13419 Haloacid dehalogenase-like hydrolase H5029_07700 PF01037 Lrp/AsnC ligand binding domain H5029_07705 PF00266 Aminotransferase class-V H5029_07710 PF00324 Amino acid permease H5029_07720 PF00082 Subtilase family H5029_07720 PF05922 Peptidase inhibitor I9 H5029_07725 PF00916 Sulfate permease family H5029_07725 PF01740 STAS domain H5029_07730 PF02586 SOS response associated peptidase (SRAP) H5029_07735 PF07995 Glucose / Sorbosone dehydrogenase H5029_07745 PF03707 Bacterial signalling protein N terminal repeat H5029_07745 PF00563 EAL domain H5029_07745 PF00990 Diguanylate cyclase, GGDEF domain H5029_07765 PF02378 Phosphotransferase system, EIIC H5029_07765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H5029_07770 PF00294 pfkB family carbohydrate kinase H5029_07775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H5029_07775 PF05524 PEP-utilising enzyme, N-terminal H5029_07775 PF00391 PEP-utilising enzyme, mobile domain H5029_07775 PF02896 PEP-utilising enzyme, TIM barrel domain H5029_07775 PF00381 PTS HPr component phosphorylation site H5029_07800 PF05525 Branched-chain amino acid transport protein H5029_07805 PF00557 Metallopeptidase family M24 H5029_07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_07810 PF03466 LysR substrate binding domain H5029_07820 PF00462 Glutaredoxin H5029_07825 PF00202 Aminotransferase class-III H5029_07830 PF00571 CBS domain H5029_07830 PF00478 IMP dehydrogenase / GMP reductase domain H5029_07855 PF00448 SRP54-type protein, GTPase domain H5029_07855 PF02881 SRP54-type protein, helical bundle domain H5029_07865 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H5029_07880 PF08173 Membrane bound YbgT-like protein H5029_07885 PF02322 Cytochrome bd terminal oxidase subunit II H5029_07890 PF01654 Cytochrome bd terminal oxidase subunit I H5029_07900 PF07290 Protein of unknown function (DUF1449) H5029_07910 PF00294 pfkB family carbohydrate kinase H5029_07915 PF07715 TonB-dependent Receptor Plug Domain H5029_07915 PF00593 TonB dependent receptor H5029_07920 PF08367 Peptidase M16C associated H5029_07920 PF00675 Insulinase (Peptidase family M16) H5029_07920 PF05193 Peptidase M16 inactive domain H5029_07925 PF02253 Phospholipase A1 H5029_07930 PF02386 Cation transport protein H5029_07935 PF02254 TrkA-N domain H5029_07935 PF02080 TrkA-C domain H5029_07940 PF00585 C-terminal regulatory domain of Threonine dehydratase H5029_07940 PF00291 Pyridoxal-phosphate dependent enzyme H5029_07945 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H5029_07960 PF02774 Semialdehyde dehydrogenase, dimerisation domain H5029_07960 PF01118 Semialdehyde dehydrogenase, NAD binding domain H5029_07970 PF02617 ATP-dependent Clp protease adaptor protein ClpS H5029_07975 PF07724 AAA domain (Cdc48 subfamily) H5029_07975 PF10431 C-terminal, D2-small domain, of ClpB protein H5029_07975 PF17871 AAA lid domain H5029_07975 PF00004 ATPase family associated with various cellular activities (AAA) H5029_07975 PF02861 Clp amino terminal domain, pathogenicity island component H5029_07980 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H5029_07985 PF00793 DAHP synthetase I family H5029_08000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H5029_08000 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_08030 PF06418 CTP synthase N-terminus H5029_08030 PF00117 Glutamine amidotransferase class-I H5029_08035 PF00793 DAHP synthetase I family H5029_08040 PF03952 Enolase, N-terminal domain H5029_08040 PF00113 Enolase, C-terminal TIM barrel domain H5029_08045 PF04239 Protein of unknown function (DUF421) H5029_08050 PF04977 Septum formation initiator H5029_08055 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H5029_08060 PF01144 Coenzyme A transferase H5029_08065 PF01144 Coenzyme A transferase H5029_08070 PF00108 Thiolase, N-terminal domain H5029_08070 PF02803 Thiolase, C-terminal domain H5029_08075 PF00206 Lyase H5029_08075 PF10397 Adenylosuccinate lyase C-terminus H5029_08080 PF00561 alpha/beta hydrolase fold H5029_08085 PF07690 Major Facilitator Superfamily H5029_08090 PF02627 Carboxymuconolactone decarboxylase family H5029_08095 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal H5029_08095 PF00775 Dioxygenase H5029_08100 PF00775 Dioxygenase H5029_08105 PF01487 Type I 3-dehydroquinase H5029_08110 PF05048 Periplasmic copper-binding protein (NosD) H5029_08115 PF04966 Carbohydrate-selective porin, OprB family H5029_08120 PF13360 PQQ-like domain H5029_08120 PF01011 PQQ enzyme repeat H5029_08130 PF04143 Sulphur transport H5029_08140 PF00753 Metallo-beta-lactamase superfamily H5029_08145 PF01614 Bacterial transcriptional regulator H5029_08145 PF09339 IclR helix-turn-helix domain H5029_08150 PF03466 LysR substrate binding domain H5029_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_08155 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_08155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_08155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_08170 PF00106 short chain dehydrogenase H5029_08180 PF07690 Major Facilitator Superfamily H5029_08190 PF01425 Amidase H5029_08195 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H5029_08210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H5029_08210 PF00355 Rieske [2Fe-2S] domain H5029_08225 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_08225 PF00175 Oxidoreductase NAD-binding domain H5029_08230 PF01613 Flavin reductase like domain H5029_08235 PF12833 Helix-turn-helix domain H5029_08235 PF02311 AraC-like ligand binding domain H5029_08240 PF02728 Copper amine oxidase, N3 domain H5029_08240 PF02727 Copper amine oxidase, N2 domain H5029_08240 PF01179 Copper amine oxidase, enzyme domain H5029_08240 PF07833 Copper amine oxidase N-terminal domain H5029_08250 PF00171 Aldehyde dehydrogenase family H5029_08255 PF01804 Penicillin amidase H5029_08260 PF12146 Serine aminopeptidase, S33 H5029_08265 PF02803 Thiolase, C-terminal domain H5029_08265 PF00108 Thiolase, N-terminal domain H5029_08270 PF01144 Coenzyme A transferase H5029_08275 PF01144 Coenzyme A transferase H5029_08280 PF04444 Catechol dioxygenase N terminus H5029_08280 PF00775 Dioxygenase H5029_08285 PF02426 Muconolactone delta-isomerase H5029_08290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H5029_08290 PF13378 Enolase C-terminal domain-like H5029_08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_08295 PF03466 LysR substrate binding domain H5029_08305 PF07729 FCD domain H5029_08305 PF00392 Bacterial regulatory proteins, gntR family H5029_08310 PF00920 Dehydratase family H5029_08315 PF07690 Major Facilitator Superfamily H5029_08325 PF00171 Aldehyde dehydrogenase family H5029_08345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_08345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_08345 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_08355 PF02954 Bacterial regulatory protein, Fis family H5029_08355 PF06506 Propionate catabolism activator H5029_08355 PF00158 Sigma-54 interaction domain H5029_08360 PF00501 AMP-binding enzyme H5029_08360 PF13193 AMP-binding enzyme C-terminal domain H5029_08365 PF04341 Protein of unknown function, DUF485 H5029_08370 PF00474 Sodium:solute symporter family H5029_08375 PF08240 Alcohol dehydrogenase GroES-like domain H5029_08375 PF00107 Zinc-binding dehydrogenase H5029_08380 PF00171 Aldehyde dehydrogenase family H5029_08390 PF00561 alpha/beta hydrolase fold H5029_08395 PF00199 Catalase H5029_08395 PF06628 Catalase-related immune-responsive H5029_08410 PF07859 alpha/beta hydrolase fold H5029_08415 PF01047 MarR family H5029_08420 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_08420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H5029_08425 PF00106 short chain dehydrogenase H5029_08430 PF01872 RibD C-terminal domain H5029_08435 PF09278 MerR, DNA binding H5029_08435 PF00376 MerR family regulatory protein H5029_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_08455 PF12706 Beta-lactamase superfamily domain H5029_08460 PF08359 YsiA-like protein, C-terminal region H5029_08460 PF00440 Bacterial regulatory proteins, tetR family H5029_08470 PF00857 Isochorismatase family H5029_08475 PF03466 LysR substrate binding domain H5029_08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_08480 PF07995 Glucose / Sorbosone dehydrogenase H5029_08485 PF02254 TrkA-N domain H5029_08485 PF00999 Sodium/hydrogen exchanger family H5029_08495 PF07687 Peptidase dimerisation domain H5029_08495 PF01546 Peptidase family M20/M25/M40 H5029_08505 PF08479 POTRA domain, ShlB-type H5029_08505 PF17287 POTRA domain H5029_08505 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H5029_08510 PF13018 Extended Signal Peptide of Type V secretion system H5029_08510 PF04829 Pre-toxin domain with VENN motif H5029_08510 PF13332 Hemagglutinin repeat H5029_08510 PF05860 haemagglutination activity domain H5029_08525 PF07690 Major Facilitator Superfamily H5029_08530 PF04909 Amidohydrolase H5029_08540 PF00392 Bacterial regulatory proteins, gntR family H5029_08540 PF07702 UTRA domain H5029_08545 PF08450 SMP-30/Gluconolactonase/LRE-like region H5029_08555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_08555 PF03466 LysR substrate binding domain H5029_08575 PF07690 Major Facilitator Superfamily H5029_08580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5029_08580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H5029_08580 PF01842 ACT domain H5029_08585 PF03737 Aldolase/RraA H5029_08605 PF00529 HlyD membrane-fusion protein of T1SS H5029_08605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_08620 PF00171 Aldehyde dehydrogenase family H5029_08625 PF00920 Dehydratase family H5029_08635 PF03466 LysR substrate binding domain H5029_08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_08640 PF01370 NAD dependent epimerase/dehydratase family H5029_08645 PF07690 Major Facilitator Superfamily H5029_08650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H5029_08650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H5029_08655 PF12833 Helix-turn-helix domain H5029_08655 PF06719 AraC-type transcriptional regulator N-terminus H5029_08670 PF08240 Alcohol dehydrogenase GroES-like domain H5029_08670 PF00107 Zinc-binding dehydrogenase H5029_08680 PF01032 FecCD transport family H5029_08685 PF00005 ABC transporter H5029_08705 PF14572 Phosphoribosyl synthetase-associated domain H5029_08705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H5029_08710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H5029_08780 PF00196 Bacterial regulatory proteins, luxR family H5029_08785 PF01425 Amidase H5029_08790 PF13533 Biotin-lipoyl like H5029_08795 PF07690 Major Facilitator Superfamily H5029_08820 PF01975 Survival protein SurE H5029_08830 PF13291 ACT domain H5029_08830 PF04607 Region found in RelA / SpoT proteins H5029_08830 PF02824 TGS domain H5029_08880 PF12146 Serine aminopeptidase, S33 H5029_08885 PF12833 Helix-turn-helix domain H5029_08885 PF02311 AraC-like ligand binding domain H5029_08895 PF16527 Two-component sensor protein CpxA, periplasmic domain H5029_08895 PF00672 HAMP domain H5029_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_08895 PF00512 His Kinase A (phospho-acceptor) domain H5029_08900 PF00072 Response regulator receiver domain H5029_08900 PF00486 Transcriptional regulatory protein, C terminal H5029_08905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_08905 PF00529 HlyD membrane-fusion protein of T1SS H5029_08910 PF00873 AcrB/AcrD/AcrF family H5029_08915 PF02321 Outer membrane efflux protein H5029_08920 PF12146 Serine aminopeptidase, S33 H5029_08925 PF00743 Flavin-binding monooxygenase-like H5029_08930 PF01593 Flavin containing amine oxidoreductase H5029_08945 PF01266 FAD dependent oxidoreductase H5029_08965 PF16970 Type-1 fimbrial protein, A H5029_08975 PF02753 Pili assembly chaperone PapD, C-terminal domain H5029_08975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H5029_08980 PF13954 PapC N-terminal domain H5029_08980 PF13953 PapC C-terminal domain H5029_08980 PF00577 Outer membrane usher protein H5029_08985 PF00419 Fimbrial protein H5029_08995 PF00107 Zinc-binding dehydrogenase H5029_08995 PF08240 Alcohol dehydrogenase GroES-like domain H5029_09005 PF00199 Catalase H5029_09020 PF13091 PLD-like domain H5029_09040 PF01244 Membrane dipeptidase (Peptidase family M19) H5029_09045 PF13186 Iron-sulfur cluster-binding domain H5029_09045 PF04055 Radical SAM superfamily H5029_09050 PF05402 Coenzyme PQQ synthesis protein D (PqqD) H5029_09055 PF03070 TENA/THI-4/PQQC family H5029_09060 PF12706 Beta-lactamase superfamily domain H5029_09065 PF08042 PqqA family H5029_09070 PF13089 Polyphosphate kinase N-terminal domain H5029_09070 PF02503 Polyphosphate kinase middle domain H5029_09070 PF13090 Polyphosphate kinase C-terminal domain 2 H5029_09070 PF17941 Polyphosphate kinase C-terminal domain 1 H5029_09075 PF00149 Calcineurin-like phosphoesterase H5029_09085 PF00550 Phosphopantetheine attachment site H5029_09085 PF00857 Isochorismatase family H5029_09090 PF00106 short chain dehydrogenase H5029_09095 PF00005 ABC transporter H5029_09095 PF03459 TOBE domain H5029_09100 PF00528 Binding-protein-dependent transport system inner membrane component H5029_09110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_09110 PF03459 TOBE domain H5029_09115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H5029_09115 PF00355 Rieske [2Fe-2S] domain H5029_09120 PF00866 Ring hydroxylating beta subunit H5029_09125 PF00175 Oxidoreductase NAD-binding domain H5029_09125 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_09125 PF00970 Oxidoreductase FAD-binding domain H5029_09130 PF12833 Helix-turn-helix domain H5029_09130 PF14525 AraC-binding-like domain H5029_09140 PF01613 Flavin reductase like domain H5029_09155 PF01738 Dienelactone hydrolase family H5029_09165 PF06719 AraC-type transcriptional regulator N-terminus H5029_09165 PF12833 Helix-turn-helix domain H5029_09190 PF03466 LysR substrate binding domain H5029_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_09200 PF01144 Coenzyme A transferase H5029_09205 PF01144 Coenzyme A transferase H5029_09210 PF02667 Short chain fatty acid transporter H5029_09215 PF00108 Thiolase, N-terminal domain H5029_09215 PF02803 Thiolase, C-terminal domain H5029_09220 PF03466 LysR substrate binding domain H5029_09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_09225 PF03466 LysR substrate binding domain H5029_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_09240 PF10415 Fumarase C C-terminus H5029_09240 PF00206 Lyase H5029_09245 PF00593 TonB dependent receptor H5029_09245 PF07715 TonB-dependent Receptor Plug Domain H5029_09250 PF00083 Sugar (and other) transporter H5029_09265 PF00005 ABC transporter H5029_09270 PF00528 Binding-protein-dependent transport system inner membrane component H5029_09275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H5029_09290 PF00392 Bacterial regulatory proteins, gntR family H5029_09290 PF07702 UTRA domain H5029_09300 PF02525 Flavodoxin-like fold H5029_09305 PF01638 HxlR-like helix-turn-helix H5029_09310 PF06445 GyrI-like small molecule binding domain H5029_09310 PF12833 Helix-turn-helix domain H5029_09325 PF01925 Sulfite exporter TauE/SafE H5029_09330 PF00753 Metallo-beta-lactamase superfamily H5029_09330 PF04273 Putative phosphatase (DUF442) H5029_09335 PF00753 Metallo-beta-lactamase superfamily H5029_09335 PF04273 Putative phosphatase (DUF442) H5029_09340 PF00072 Response regulator receiver domain H5029_09340 PF02954 Bacterial regulatory protein, Fis family H5029_09340 PF00158 Sigma-54 interaction domain H5029_09345 PF01062 Bestrophin, RFP-TM, chloride channel H5029_09350 PF00107 Zinc-binding dehydrogenase H5029_09350 PF08240 Alcohol dehydrogenase GroES-like domain H5029_09355 PF00106 short chain dehydrogenase H5029_09360 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_09360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5029_09365 PF02817 e3 binding domain H5029_09365 PF00364 Biotin-requiring enzyme H5029_09365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H5029_09370 PF02780 Transketolase, C-terminal domain H5029_09370 PF02779 Transketolase, pyrimidine binding domain H5029_09375 PF00676 Dehydrogenase E1 component H5029_09380 PF04055 Radical SAM superfamily H5029_09395 PF00990 Diguanylate cyclase, GGDEF domain H5029_09395 PF08448 PAS fold H5029_09400 PF01264 Chorismate synthase H5029_09405 PF05175 Methyltransferase small domain H5029_09410 PF00291 Pyridoxal-phosphate dependent enzyme H5029_09420 PF17862 AAA+ lid domain H5029_09420 PF00004 ATPase family associated with various cellular activities (AAA) H5029_09420 PF01434 Peptidase family M41 H5029_09430 PF05166 YcgL domain H5029_09450 PF00570 HRDC domain H5029_09450 PF01612 3'-5' exonuclease H5029_09455 PF02132 RecR protein H5029_09455 PF13662 Toprim domain H5029_09460 PF02575 YbaB/EbfC DNA-binding family H5029_09470 PF01053 Cys/Met metabolism PLP-dependent enzyme H5029_09475 PF00561 alpha/beta hydrolase fold H5029_09480 PF08241 Methyltransferase domain H5029_09510 PF01230 HIT domain H5029_09545 PF00005 ABC transporter H5029_09550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_09560 PF02684 Lipid-A-disaccharide synthetase H5029_09565 PF00593 TonB dependent receptor H5029_09565 PF07715 TonB-dependent Receptor Plug Domain H5029_09585 PF01925 Sulfite exporter TauE/SafE H5029_09590 PF00793 DAHP synthetase I family H5029_09595 PF02654 Cobalamin-5-phosphate synthase H5029_09610 PF02277 Phosphoribosyltransferase H5029_09615 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H5029_09625 PF13419 Haloacid dehalogenase-like hydrolase H5029_09650 PF00593 TonB dependent receptor H5029_09650 PF07715 TonB-dependent Receptor Plug Domain H5029_09665 PF06276 Ferric iron reductase FhuF-like transporter H5029_09665 PF04183 IucA / IucC family H5029_09670 PF06276 Ferric iron reductase FhuF-like transporter H5029_09670 PF04183 IucA / IucC family H5029_09675 PF07690 Major Facilitator Superfamily H5029_09680 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H5029_09685 PF06276 Ferric iron reductase FhuF-like transporter H5029_09685 PF04183 IucA / IucC family H5029_09690 PF04073 Aminoacyl-tRNA editing domain H5029_09700 PF03109 ABC1 family H5029_09705 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_09705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_09705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_09710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_09710 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_09710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_09715 PF00487 Fatty acid desaturase H5029_09720 PF12833 Helix-turn-helix domain H5029_09720 PF12852 Cupin H5029_09725 PF00639 PPIC-type PPIASE domain H5029_09725 PF09312 SurA N-terminal domain H5029_09730 PF00216 Bacterial DNA-binding protein H5029_09745 PF02082 Transcriptional regulator H5029_09750 PF00266 Aminotransferase class-V H5029_09755 PF01592 NifU-like N terminal domain H5029_09760 PF01521 Iron-sulphur cluster biosynthesis H5029_09765 PF00226 DnaJ domain H5029_09765 PF07743 HSCB C-terminal oligomerisation domain H5029_09770 PF00012 Hsp70 protein H5029_09775 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_09780 PF00211 Adenylate and Guanylate cyclase catalytic domain H5029_09790 PF00271 Helicase conserved C-terminal domain H5029_09790 PF00270 DEAD/DEAH box helicase H5029_09790 PF17757 UvrB interaction domain H5029_09790 PF03461 TRCF domain H5029_09790 PF02559 CarD-like/TRCF domain H5029_09810 PF03737 Aldolase/RraA H5029_09815 PF13460 NAD(P)H-binding H5029_09820 PF01649 Ribosomal protein S20 H5029_09830 PF00459 Inositol monophosphatase family H5029_09845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H5029_09845 PF00005 ABC transporter H5029_09850 PF00528 Binding-protein-dependent transport system inner membrane component H5029_09855 PF00528 Binding-protein-dependent transport system inner membrane component H5029_09860 PF01432 Peptidase family M3 H5029_09880 PF07715 TonB-dependent Receptor Plug Domain H5029_09880 PF00593 TonB dependent receptor H5029_09890 PF01618 MotA/TolQ/ExbB proton channel family H5029_09895 PF02472 Biopolymer transport protein ExbD/TolR H5029_09900 PF02472 Biopolymer transport protein ExbD/TolR H5029_09910 PF01274 Malate synthase H5029_09915 PF03969 AFG1-like ATPase H5029_09925 PF00743 Flavin-binding monooxygenase-like H5029_09935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H5029_09945 PF00216 Bacterial DNA-binding protein H5029_09950 PF00575 S1 RNA binding domain H5029_09955 PF02224 Cytidylate kinase H5029_09965 PF14437 MafB19-like deaminase H5029_09975 PF03167 Uracil DNA glycosylase superfamily H5029_09985 PF03934 Type II secretion system (T2SS), protein K H5029_09990 PF07963 Prokaryotic N-terminal methylation motif H5029_09990 PF11612 Type II secretion system (T2SS), protein J H5029_09995 PF07963 Prokaryotic N-terminal methylation motif H5029_09995 PF02501 Type II secretion system (T2SS), protein I H5029_10010 PF01026 TatD related DNase H5029_10020 PF09115 DNA polymerase III, delta subunit, C terminal H5029_10025 PF02348 Cytidylyltransferase H5029_10030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H5029_10035 PF00664 ABC transporter transmembrane region H5029_10035 PF00005 ABC transporter H5029_10045 PF01618 MotA/TolQ/ExbB proton channel family H5029_10050 PF17762 HTH domain found in ParB protein H5029_10050 PF02195 ParB-like nuclease domain H5029_10055 PF13614 AAA domain H5029_10060 PF02527 rRNA small subunit methyltransferase G H5029_10065 PF00483 Nucleotidyl transferase H5029_10070 PF01636 Phosphotransferase enzyme family H5029_10075 PF03968 OstA-like protein H5029_10075 PF04453 LPS transport system D H5029_10080 PF00639 PPIC-type PPIASE domain H5029_10080 PF09312 SurA N-terminal domain H5029_10085 PF01116 Fructose-bisphosphate aldolase class-II H5029_10095 PF00162 Phosphoglycerate kinase H5029_10105 PF02545 Maf-like protein H5029_10110 PF08007 Cupin superfamily protein H5029_10130 PF00375 Sodium:dicarboxylate symporter family H5029_10135 PF06912 Protein of unknown function (DUF1275) H5029_10140 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H5029_10145 PF00005 ABC transporter H5029_10145 PF00664 ABC transporter transmembrane region H5029_10155 PF12833 Helix-turn-helix domain H5029_10155 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H5029_10160 PF01597 Glycine cleavage H-protein H5029_10165 PF02146 Sir2 family H5029_10170 PF00474 Sodium:solute symporter family H5029_10175 PF01037 Lrp/AsnC ligand binding domain H5029_10180 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H5029_10180 PF14850 DNA-binding domain of Proline dehydrogenase H5029_10180 PF01619 Proline dehydrogenase H5029_10180 PF00171 Aldehyde dehydrogenase family H5029_10185 PF04229 GrpB protein H5029_10190 PF05958 tRNA (Uracil-5-)-methyltransferase H5029_10200 PF09992 Phosphodiester glycosidase H5029_10210 PF04264 YceI-like domain H5029_10220 PF02779 Transketolase, pyrimidine binding domain H5029_10220 PF02780 Transketolase, C-terminal domain H5029_10220 PF00456 Transketolase, thiamine diphosphate binding domain H5029_10225 PF00438 S-adenosylmethionine synthetase, N-terminal domain H5029_10225 PF02772 S-adenosylmethionine synthetase, central domain H5029_10225 PF02773 S-adenosylmethionine synthetase, C-terminal domain H5029_10245 PF00905 Penicillin binding protein transpeptidase domain H5029_10260 PF02075 Crossover junction endodeoxyribonuclease RuvC H5029_10265 PF03853 YjeF-related protein N-terminus H5029_10265 PF01256 Carbohydrate kinase H5029_10270 PF08331 Domain of unknown function (DUF1730) H5029_10275 PF04055 Radical SAM superfamily H5029_10275 PF06968 Biotin and Thiamin Synthesis associated domain H5029_10290 PF16970 Type-1 fimbrial protein, A H5029_10295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H5029_10295 PF02753 Pili assembly chaperone PapD, C-terminal domain H5029_10300 PF00577 Outer membrane usher protein H5029_10300 PF13954 PapC N-terminal domain H5029_10300 PF13953 PapC C-terminal domain H5029_10320 PF00892 EamA-like transporter family H5029_10330 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H5029_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10340 PF03466 LysR substrate binding domain H5029_10360 PF00440 Bacterial regulatory proteins, tetR family H5029_10370 PF01709 Transcriptional regulator H5029_10375 PF01037 Lrp/AsnC ligand binding domain H5029_10385 PF00005 ABC transporter H5029_10390 PF00528 Binding-protein-dependent transport system inner membrane component H5029_10395 PF00528 Binding-protein-dependent transport system inner membrane component H5029_10410 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H5029_10410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_10420 PF00296 Luciferase-like monooxygenase H5029_10425 PF03180 NLPA lipoprotein H5029_10430 PF03180 NLPA lipoprotein H5029_10435 PF09383 NIL domain H5029_10435 PF00005 ABC transporter H5029_10440 PF00528 Binding-protein-dependent transport system inner membrane component H5029_10445 PF01926 50S ribosome-binding GTPase H5029_10445 PF06071 Protein of unknown function (DUF933) H5029_10470 PF03591 AzlC protein H5029_10475 PF05437 Branched-chain amino acid transport protein (AzlD) H5029_10485 PF02222 ATP-grasp domain H5029_10490 PF01966 HD domain H5029_10490 PF08335 GlnD PII-uridylyltransferase H5029_10490 PF01909 Nucleotidyltransferase domain H5029_10495 PF00155 Aminotransferase class I and II H5029_10505 PF12852 Cupin H5029_10505 PF12833 Helix-turn-helix domain H5029_10510 PF00255 Glutathione peroxidase H5029_10515 PF01641 SelR domain H5029_10520 PF00155 Aminotransferase class I and II H5029_10525 PF00375 Sodium:dicarboxylate symporter family H5029_10530 PF00710 Asparaginase, N-terminal H5029_10530 PF17763 Glutaminase/Asparaginase C-terminal domain H5029_10535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H5029_10535 PF02811 PHP domain H5029_10535 PF07733 Bacterial DNA polymerase III alpha NTPase domain H5029_10535 PF14579 Helix-hairpin-helix motif H5029_10535 PF01336 OB-fold nucleic acid binding domain H5029_10540 PF00588 SpoU rRNA Methylase family H5029_10545 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_10560 PF13192 Thioredoxin domain H5029_10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10575 PF03466 LysR substrate binding domain H5029_10580 PF01758 Sodium Bile acid symporter family H5029_10585 PF01022 Bacterial regulatory protein, arsR family H5029_10590 PF03960 ArsC family H5029_10600 PF13382 Adenine deaminase C-terminal domain H5029_10600 PF01979 Amidohydrolase family H5029_10610 PF03466 LysR substrate binding domain H5029_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H5029_10625 PF01177 Asp/Glu/Hydantoin racemase H5029_10630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H5029_10635 PF00528 Binding-protein-dependent transport system inner membrane component H5029_10640 PF00005 ABC transporter H5029_10645 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H5029_10660 PF00083 Sugar (and other) transporter H5029_10665 PF00296 Luciferase-like monooxygenase H5029_10670 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H5029_10670 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_10670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_10680 PF01654 Cytochrome bd terminal oxidase subunit I H5029_10685 PF02322 Cytochrome bd terminal oxidase subunit II H5029_10695 PF00155 Aminotransferase class I and II H5029_10695 PF00392 Bacterial regulatory proteins, gntR family H5029_10700 PF03466 LysR substrate binding domain H5029_10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10715 PF00698 Acyl transferase domain H5029_10720 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG H5029_10730 PF01039 Carboxyl transferase domain H5029_10735 PF06857 Malonate decarboxylase delta subunit (MdcD) H5029_10740 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase H5029_10745 PF16957 Malonate decarboxylase, alpha subunit, transporter H5029_10750 PF07690 Major Facilitator Superfamily H5029_10765 PF00155 Aminotransferase class I and II H5029_10765 PF00392 Bacterial regulatory proteins, gntR family H5029_10770 PF04172 LrgB-like family H5029_10775 PF03788 LrgA family H5029_10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10780 PF03466 LysR substrate binding domain H5029_10785 PF02798 Glutathione S-transferase, N-terminal domain H5029_10785 PF14834 Glutathione S-transferase, C-terminal domain H5029_10790 PF02798 Glutathione S-transferase, N-terminal domain H5029_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10795 PF03466 LysR substrate binding domain H5029_10805 PF00581 Rhodanese-like domain H5029_10810 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_10820 PF00266 Aminotransferase class-V H5029_10830 PF01810 LysE type translocator H5029_10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10835 PF03466 LysR substrate binding domain H5029_10845 PF00497 Bacterial extracellular solute-binding proteins, family 3 H5029_10850 PF00497 Bacterial extracellular solute-binding proteins, family 3 H5029_10855 PF00005 ABC transporter H5029_10860 PF00528 Binding-protein-dependent transport system inner membrane component H5029_10865 PF00528 Binding-protein-dependent transport system inner membrane component H5029_10880 PF00072 Response regulator receiver domain H5029_10885 PF09308 LuxQ, periplasmic H5029_10885 PF00512 His Kinase A (phospho-acceptor) domain H5029_10885 PF00072 Response regulator receiver domain H5029_10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_10895 PF01037 Lrp/AsnC ligand binding domain H5029_10895 PF13404 AsnC-type helix-turn-helix domain H5029_10905 PF00717 Peptidase S24-like H5029_10930 PF18011 C-terminal domain found in long catalases H5029_10930 PF00199 Catalase H5029_10930 PF06628 Catalase-related immune-responsive H5029_10940 PF00994 Probable molybdopterin binding domain H5029_10940 PF18146 Damage-inducible protein CinA KH domain H5029_10940 PF02464 Competence-damaged protein H5029_10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_10975 PF03466 LysR substrate binding domain H5029_10995 PF13193 AMP-binding enzyme C-terminal domain H5029_10995 PF00501 AMP-binding enzyme H5029_11000 PF00440 Bacterial regulatory proteins, tetR family H5029_11005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_11005 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_11005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_11010 PF01039 Carboxyl transferase domain H5029_11015 PF00378 Enoyl-CoA hydratase/isomerase H5029_11020 PF00289 Biotin carboxylase, N-terminal domain H5029_11020 PF18140 Propionyl-coenzyme A carboxylase BT domain H5029_11020 PF02785 Biotin carboxylase C-terminal domain H5029_11020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H5029_11020 PF00364 Biotin-requiring enzyme H5029_11025 PF00682 HMGL-like H5029_11030 PF03466 LysR substrate binding domain H5029_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_11045 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_11045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_11045 PF12806 Acetyl-CoA dehydrogenase C-terminal like H5029_11045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_11055 PF07690 Major Facilitator Superfamily H5029_11065 PF01144 Coenzyme A transferase H5029_11070 PF01144 Coenzyme A transferase H5029_11075 PF07690 Major Facilitator Superfamily H5029_11080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_11080 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_11080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_11085 PF00378 Enoyl-CoA hydratase/isomerase H5029_11095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H5029_11095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H5029_11095 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H5029_11100 PF00108 Thiolase, N-terminal domain H5029_11100 PF02803 Thiolase, C-terminal domain H5029_11105 PF09339 IclR helix-turn-helix domain H5029_11110 PF07690 Major Facilitator Superfamily H5029_11115 PF03060 Nitronate monooxygenase H5029_11120 PF00378 Enoyl-CoA hydratase/isomerase H5029_11125 PF09339 IclR helix-turn-helix domain H5029_11130 PF02515 CoA-transferase family III H5029_11135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_11135 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_11135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_11140 PF07690 Major Facilitator Superfamily H5029_11145 PF13419 Haloacid dehalogenase-like hydrolase H5029_11150 PF00266 Aminotransferase class-V H5029_11155 PF01266 FAD dependent oxidoreductase H5029_11160 PF00528 Binding-protein-dependent transport system inner membrane component H5029_11165 PF08402 TOBE domain H5029_11165 PF00005 ABC transporter H5029_11175 PF07702 UTRA domain H5029_11175 PF00392 Bacterial regulatory proteins, gntR family H5029_11180 PF01494 FAD binding domain H5029_11185 PF09339 IclR helix-turn-helix domain H5029_11185 PF01614 Bacterial transcriptional regulator H5029_11190 PF02525 Flavodoxin-like fold H5029_11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_11195 PF03466 LysR substrate binding domain H5029_11200 PF02627 Carboxymuconolactone decarboxylase family H5029_11205 PF00171 Aldehyde dehydrogenase family H5029_11215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H5029_11225 PF00171 Aldehyde dehydrogenase family H5029_11230 PF00296 Luciferase-like monooxygenase H5029_11235 PF01613 Flavin reductase like domain H5029_11240 PF12697 Alpha/beta hydrolase family H5029_11260 PF01292 Prokaryotic cytochrome b561 H5029_11265 PF00199 Catalase H5029_11300 PF03061 Thioesterase superfamily H5029_11305 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_11310 PF08223 PaaX-like protein C-terminal domain H5029_11310 PF07848 PaaX-like protein H5029_11315 PF14535 AMP-binding enzyme C-terminal domain H5029_11315 PF00501 AMP-binding enzyme H5029_11320 PF02803 Thiolase, C-terminal domain H5029_11320 PF00108 Thiolase, N-terminal domain H5029_11325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H5029_11325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H5029_11325 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H5029_11330 PF00378 Enoyl-CoA hydratase/isomerase H5029_11335 PF00378 Enoyl-CoA hydratase/isomerase H5029_11340 PF00175 Oxidoreductase NAD-binding domain H5029_11340 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_11340 PF00970 Oxidoreductase FAD-binding domain H5029_11345 PF01883 Iron-sulfur cluster assembly protein H5029_11350 PF05138 Phenylacetic acid catabolic protein H5029_11355 PF06243 Phenylacetic acid degradation B H5029_11360 PF05138 Phenylacetic acid catabolic protein H5029_11365 PF01575 MaoC like domain H5029_11365 PF00171 Aldehyde dehydrogenase family H5029_11370 PF03313 Serine dehydratase alpha chain H5029_11370 PF03315 Serine dehydratase beta chain H5029_11375 PF13520 Amino acid permease H5029_11380 PF00171 Aldehyde dehydrogenase family H5029_11385 PF00083 Sugar (and other) transporter H5029_11395 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_11395 PF04324 BFD-like [2Fe-2S] binding domain H5029_11405 PF01266 FAD dependent oxidoreductase H5029_11410 PF05544 Proline racemase H5029_11415 PF00392 Bacterial regulatory proteins, gntR family H5029_11425 PF00701 Dihydrodipicolinate synthetase family H5029_11435 PF00376 MerR family regulatory protein H5029_11435 PF09278 MerR, DNA binding H5029_11450 PF02677 Epoxyqueuosine reductase QueH H5029_11465 PF07690 Major Facilitator Superfamily H5029_11470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H5029_11480 PF03466 LysR substrate binding domain H5029_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_11500 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H5029_11505 PF06812 ImpA, N-terminal, type VI secretion system H5029_11510 PF07724 AAA domain (Cdc48 subfamily) H5029_11510 PF17871 AAA lid domain H5029_11510 PF10431 C-terminal, D2-small domain, of ClpB protein H5029_11510 PF00004 ATPase family associated with various cellular activities (AAA) H5029_11520 PF01389 OmpA-like transmembrane domain H5029_11520 PF00691 OmpA family H5029_11530 PF14331 ImcF-related N-terminal domain H5029_11530 PF06744 Type VI secretion protein IcmF C-terminal H5029_11530 PF06761 Intracellular multiplication and human macrophage-killing H5029_11545 PF05947 Type VI secretion system, TssF H5029_11560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H5029_11585 PF00005 ABC transporter H5029_11590 PF00497 Bacterial extracellular solute-binding proteins, family 3 H5029_11595 PF01425 Amidase H5029_11600 PF08753 NikR C terminal nickel binding domain H5029_11600 PF01402 Ribbon-helix-helix protein, copG family H5029_11620 PF02525 Flavodoxin-like fold H5029_11625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H5029_11625 PF02785 Biotin carboxylase C-terminal domain H5029_11625 PF00289 Biotin carboxylase, N-terminal domain H5029_11640 PF00107 Zinc-binding dehydrogenase H5029_11640 PF08240 Alcohol dehydrogenase GroES-like domain H5029_11640 PF13823 Alcohol dehydrogenase GroES-associated H5029_11650 PF00440 Bacterial regulatory proteins, tetR family H5029_11685 PF07286 Protein of unknown function (DUF1445) H5029_11695 PF01566 Natural resistance-associated macrophage protein H5029_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_11700 PF03466 LysR substrate binding domain H5029_11715 PF03527 RHS protein H5029_11715 PF05593 RHS Repeat H5029_11730 PF13419 Haloacid dehalogenase-like hydrolase H5029_11750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H5029_11750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H5029_11780 PF03279 Bacterial lipid A biosynthesis acyltransferase H5029_11795 PF00892 EamA-like transporter family H5029_11800 PF01037 Lrp/AsnC ligand binding domain H5029_11805 PF05188 MutS domain II H5029_11805 PF05192 MutS domain III H5029_11805 PF05190 MutS family domain IV H5029_11805 PF00488 MutS domain V H5029_11805 PF01624 MutS domain I H5029_11815 PF00037 4Fe-4S binding domain H5029_11815 PF11953 Domain of unknown function (DUF3470) H5029_11825 PF01596 O-methyltransferase H5029_11835 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_11840 PF01205 Uncharacterized protein family UPF0029 H5029_11850 PF00005 ABC transporter H5029_11850 PF03412 Peptidase C39 family H5029_11850 PF00664 ABC transporter transmembrane region H5029_11855 PF02321 Outer membrane efflux protein H5029_11860 PF00005 ABC transporter H5029_11860 PF12399 Branched-chain amino acid ATP-binding cassette transporter H5029_11865 PF03968 OstA-like protein H5029_11880 PF01380 SIS domain H5029_11880 PF00571 CBS domain H5029_11885 PF01406 tRNA synthetases class I (C) catalytic domain H5029_11885 PF09190 DALR domain H5029_11910 PF01638 HxlR-like helix-turn-helix H5029_11915 PF07690 Major Facilitator Superfamily H5029_11940 PF14748 Pyrroline-5-carboxylate reductase dimerisation H5029_11940 PF03807 NADP oxidoreductase coenzyme F420-dependent H5029_11950 PF00313 'Cold-shock' DNA-binding domain H5029_11955 PF01810 LysE type translocator H5029_11985 PF02601 Exonuclease VII, large subunit H5029_11985 PF13742 OB-fold nucleic acid binding domain H5029_12020 PF09278 MerR, DNA binding H5029_12020 PF00376 MerR family regulatory protein H5029_12025 PF00403 Heavy-metal-associated domain H5029_12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_12035 PF03466 LysR substrate binding domain H5029_12040 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H5029_12040 PF00355 Rieske [2Fe-2S] domain H5029_12045 PF00866 Ring hydroxylating beta subunit H5029_12050 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_12050 PF00175 Oxidoreductase NAD-binding domain H5029_12050 PF00970 Oxidoreductase FAD-binding domain H5029_12055 PF00106 short chain dehydrogenase H5029_12060 PF03594 Benzoate membrane transport protein H5029_12065 PF07690 Major Facilitator Superfamily H5029_12075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H5029_12075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H5029_12080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H5029_12080 PF00270 DEAD/DEAH box helicase H5029_12080 PF04408 Helicase associated domain (HA2) H5029_12080 PF11898 Domain of unknown function (DUF3418) H5029_12080 PF00271 Helicase conserved C-terminal domain H5029_12085 PF00578 AhpC/TSA family H5029_12085 PF10417 C-terminal domain of 1-Cys peroxiredoxin H5029_12105 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_12105 PF13192 Thioredoxin domain H5029_12115 PF00043 Glutathione S-transferase, C-terminal domain H5029_12115 PF02798 Glutathione S-transferase, N-terminal domain H5029_12125 PF02390 Putative methyltransferase H5029_12130 PF13417 Glutathione S-transferase, N-terminal domain H5029_12130 PF00043 Glutathione S-transferase, C-terminal domain H5029_12140 PF13488 Glycine zipper H5029_12140 PF00691 OmpA family H5029_12145 PF01979 Amidohydrolase family H5029_12150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H5029_12150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H5029_12160 PF10672 S-adenosylmethionine-dependent methyltransferase H5029_12160 PF02926 THUMP domain H5029_12160 PF01170 Putative RNA methylase family UPF0020 H5029_12175 PF00004 ATPase family associated with various cellular activities (AAA) H5029_12175 PF17871 AAA lid domain H5029_12175 PF10431 C-terminal, D2-small domain, of ClpB protein H5029_12175 PF02861 Clp amino terminal domain, pathogenicity island component H5029_12175 PF07724 AAA domain (Cdc48 subfamily) H5029_12190 PF02566 OsmC-like protein H5029_12195 PF00027 Cyclic nucleotide-binding domain H5029_12195 PF13545 Crp-like helix-turn-helix domain H5029_12205 PF00248 Aldo/keto reductase family H5029_12220 PF00709 Adenylosuccinate synthetase H5029_12225 PF13393 Histidyl-tRNA synthetase H5029_12230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H5029_12230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H5029_12235 PF01411 tRNA synthetases class II (A) H5029_12235 PF02272 DHHA1 domain H5029_12235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H5029_12240 PF13840 ACT domain H5029_12240 PF00696 Amino acid kinase family H5029_12240 PF01842 ACT domain H5029_12245 PF02599 Global regulator protein family H5029_12250 PF01351 Ribonuclease HII H5029_12260 PF01292 Prokaryotic cytochrome b561 H5029_12265 PF00962 Adenosine/AMP deaminase H5029_12270 PF00860 Permease family H5029_12280 PF00743 Flavin-binding monooxygenase-like H5029_12285 PF00106 short chain dehydrogenase H5029_12295 PF17954 Quercetinase C-terminal cupin domain H5029_12295 PF02678 Pirin H5029_12300 PF17932 Tetracyclin repressor-like, C-terminal domain H5029_12300 PF00440 Bacterial regulatory proteins, tetR family H5029_12305 PF13610 DDE domain H5029_12310 PF01636 Phosphotransferase enzyme family H5029_12320 PF13610 DDE domain H5029_12325 PF02796 Helix-turn-helix domain of resolvase H5029_12325 PF00239 Resolvase, N terminal domain H5029_12335 PF13610 DDE domain H5029_12345 PF02796 Helix-turn-helix domain of resolvase H5029_12345 PF00239 Resolvase, N terminal domain H5029_12350 PF13610 DDE domain H5029_12365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H5029_12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_12370 PF00764 Arginosuccinate synthase H5029_12375 PF00990 Diguanylate cyclase, GGDEF domain H5029_12375 PF00360 Phytochrome region H5029_12375 PF01590 GAF domain H5029_12375 PF00563 EAL domain H5029_12380 PF01979 Amidohydrolase family H5029_12385 PF00929 Exonuclease H5029_12395 PF00593 TonB dependent receptor H5029_12395 PF07715 TonB-dependent Receptor Plug Domain H5029_12400 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_12400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H5029_12405 PF00005 ABC transporter H5029_12405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H5029_12410 PF00528 Binding-protein-dependent transport system inner membrane component H5029_12410 PF12911 N-terminal TM domain of oligopeptide transport permease C H5029_12415 PF00528 Binding-protein-dependent transport system inner membrane component H5029_12420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H5029_12425 PF01476 LysM domain H5029_12425 PF01476 LysM domain H5029_12425 PF01464 Transglycosylase SLT domain H5029_12425 PF01464 Transglycosylase SLT domain H5029_12430 PF00929 Exonuclease H5029_12440 PF00293 NUDIX domain H5029_12440 PF09297 NADH pyrophosphatase zinc ribbon domain H5029_12450 PF04972 BON domain H5029_12455 PF02021 Uncharacterised protein family UPF0102 H5029_12460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H5029_12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_12470 PF03466 LysR substrate binding domain H5029_12475 PF01810 LysE type translocator H5029_12485 PF13411 MerR HTH family regulatory protein H5029_12495 PF01494 FAD binding domain H5029_12500 PF01494 FAD binding domain H5029_12505 PF05195 Aminopeptidase P, N-terminal domain H5029_12505 PF00557 Metallopeptidase family M24 H5029_12540 PF08019 Phosphoethanolamine transferase EptA/EptB H5029_12540 PF00884 Sulfatase H5029_12585 PF01476 LysM domain H5029_12585 PF08525 Opacity-associated protein A N-terminal motif H5029_12585 PF01551 Peptidase family M23 H5029_12910 PF01812 5-formyltetrahydrofolate cyclo-ligase family H5029_12915 PF04355 SmpA / OmlA family H5029_12915 PF00691 OmpA family H5029_12920 PF03895 YadA-like membrane anchor domain H5029_12920 PF05662 Coiled stalk of trimeric autotransporter adhesin H5029_12920 PF05658 Head domain of trimeric autotransporter adhesin H5029_12920 PF13018 Extended Signal Peptide of Type V secretion system H5029_12925 PF00004 ATPase family associated with various cellular activities (AAA) H5029_12925 PF05362 Lon protease (S16) C-terminal proteolytic domain H5029_12925 PF02190 ATP-dependent protease La (LON) substrate-binding domain H5029_12930 PF02590 Predicted SPOUT methyltransferase H5029_12935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H5029_12945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H5029_12945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H5029_12950 PF04060 Putative Fe-S cluster H5029_12955 PF00730 HhH-GPD superfamily base excision DNA repair protein H5029_12955 PF10576 Iron-sulfur binding domain of endonuclease III H5029_12955 PF00633 Helix-hairpin-helix motif H5029_12965 PF05191 Adenylate kinase, active site lid H5029_12980 PF00905 Penicillin binding protein transpeptidase domain H5029_12980 PF03717 Penicillin-binding Protein dimerisation domain H5029_12995 PF02492 CobW/HypB/UreG, nucleotide-binding domain H5029_13000 PF01730 UreF H5029_13005 PF05194 UreE urease accessory protein, C-terminal domain H5029_13005 PF02814 UreE urease accessory protein, N-terminal domain H5029_13010 PF00449 Urease alpha-subunit, N-terminal domain H5029_13010 PF01979 Amidohydrolase family H5029_13015 PF00699 Urease beta subunit H5029_13020 PF00547 Urease, gamma subunit H5029_13025 PF01774 UreD urease accessory protein H5029_13040 PF00463 Isocitrate lyase family H5029_13045 PF03466 LysR substrate binding domain H5029_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_13050 PF03471 Transporter associated domain H5029_13050 PF01595 Cyclin M transmembrane N-terminal domain H5029_13050 PF00571 CBS domain H5029_13055 PF03600 Citrate transporter H5029_13070 PF00009 Elongation factor Tu GTP binding domain H5029_13075 PF01507 Phosphoadenosine phosphosulfate reductase family H5029_13090 PF14052 Capsule assembly protein Wzi H5029_13095 PF00152 tRNA synthetases class II (D, K and N) H5029_13095 PF01336 OB-fold nucleic acid binding domain H5029_13110 PF00301 Rubredoxin H5029_13115 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_13115 PF18113 Rubredoxin binding C-terminal domain H5029_13120 PF00561 alpha/beta hydrolase fold H5029_13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_13125 PF03466 LysR substrate binding domain H5029_13135 PF02503 Polyphosphate kinase middle domain H5029_13135 PF13090 Polyphosphate kinase C-terminal domain 2 H5029_13135 PF17941 Polyphosphate kinase C-terminal domain 1 H5029_13135 PF13089 Polyphosphate kinase N-terminal domain H5029_13140 PF00912 Transglycosylase H5029_13145 PF01694 Rhomboid family H5029_13155 PF00005 ABC transporter H5029_13160 PF13472 GDSL-like Lipase/Acylhydrolase family H5029_13165 PF00484 Carbonic anhydrase H5029_13170 PF00561 alpha/beta hydrolase fold H5029_13180 PF07715 TonB-dependent Receptor Plug Domain H5029_13180 PF00593 TonB dependent receptor H5029_13185 PF01106 NifU-like domain H5029_13185 PF01521 Iron-sulphur cluster biosynthesis H5029_13195 PF00884 Sulfatase H5029_13200 PF03781 Sulfatase-modifying factor enzyme 1 H5029_13215 PF00291 Pyridoxal-phosphate dependent enzyme H5029_13220 PF01384 Phosphate transporter family H5029_13225 PF02310 B12 binding domain H5029_13225 PF02965 Vitamin B12 dependent methionine synthase, activation domain H5029_13225 PF02607 B12 binding domain H5029_13225 PF02574 Homocysteine S-methyltransferase H5029_13225 PF00809 Pterin binding enzyme H5029_13230 PF02780 Transketolase, C-terminal domain H5029_13230 PF02779 Transketolase, pyrimidine binding domain H5029_13235 PF00456 Transketolase, thiamine diphosphate binding domain H5029_13240 PF07690 Major Facilitator Superfamily H5029_13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_13250 PF03466 LysR substrate binding domain H5029_13260 PF01263 Aldose 1-epimerase H5029_13265 PF07690 Major Facilitator Superfamily H5029_13270 PF12833 Helix-turn-helix domain H5029_13270 PF02311 AraC-like ligand binding domain H5029_13275 PF04960 Glutaminase H5029_13280 PF01327 Polypeptide deformylase H5029_13285 PF07690 Major Facilitator Superfamily H5029_13295 PF00205 Thiamine pyrophosphate enzyme, central domain H5029_13295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H5029_13295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H5029_13300 PF00171 Aldehyde dehydrogenase family H5029_13305 PF03447 Homoserine dehydrogenase, NAD binding domain H5029_13305 PF01958 Domain of unknown function DUF108 H5029_13315 PF12697 Alpha/beta hydrolase family H5029_13325 PF07690 Major Facilitator Superfamily H5029_13330 PF14759 Reductase C-terminal H5029_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_13335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H5029_13345 PF00355 Rieske [2Fe-2S] domain H5029_13355 PF00355 Rieske [2Fe-2S] domain H5029_13360 PF01614 Bacterial transcriptional regulator H5029_13360 PF09339 IclR helix-turn-helix domain H5029_13375 PF00378 Enoyl-CoA hydratase/isomerase H5029_13385 PF00535 Glycosyl transferase family 2 H5029_13390 PF01522 Polysaccharide deacetylase H5029_13390 PF14883 Hypothetical glycosyl hydrolase family 13 H5029_13395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H5029_13400 PF07152 YaeQ protein H5029_13405 PF00375 Sodium:dicarboxylate symporter family H5029_13410 PF07683 Cobalamin synthesis protein cobW C-terminal domain H5029_13410 PF02492 CobW/HypB/UreG, nucleotide-binding domain H5029_13420 PF03061 Thioesterase superfamily H5029_13430 PF02028 BCCT, betaine/carnitine/choline family transporter H5029_13435 PF02028 BCCT, betaine/carnitine/choline family transporter H5029_13440 PF13977 BetI-type transcriptional repressor, C-terminal H5029_13440 PF00440 Bacterial regulatory proteins, tetR family H5029_13445 PF00171 Aldehyde dehydrogenase family H5029_13450 PF00732 GMC oxidoreductase H5029_13450 PF05199 GMC oxidoreductase H5029_13455 PF06039 Malate:quinone oxidoreductase (Mqo) H5029_13465 PF02574 Homocysteine S-methyltransferase H5029_13470 PF13520 Amino acid permease H5029_13495 PF01126 Heme oxygenase H5029_13505 PF04575 Protein of unknown function (DUF560) H5029_13515 PF00593 TonB dependent receptor H5029_13515 PF07715 TonB-dependent Receptor Plug Domain H5029_13525 PF04542 Sigma-70 region 2 H5029_13525 PF08281 Sigma-70, region 4 H5029_13535 PF00701 Dihydrodipicolinate synthetase family H5029_13540 PF00083 Sugar (and other) transporter H5029_13560 PF01026 TatD related DNase H5029_13575 PF07693 KAP family P-loop domain H5029_13595 PF00436 Single-strand binding protein family H5029_13650 PF13356 Arm DNA-binding domain H5029_13650 PF00589 Phage integrase family H5029_13665 PF00717 Peptidase S24-like H5029_13670 PF00817 impB/mucB/samB family H5029_13670 PF13438 Domain of unknown function (DUF4113) H5029_13670 PF11799 impB/mucB/samB family C-terminal domain H5029_13790 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) H5029_13805 PF06381 Protein of unknown function (DUF1073) H5029_13890 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT H5029_13895 PF00717 Peptidase S24-like H5029_13895 PF01726 LexA DNA binding domain H5029_13965 PF07690 Major Facilitator Superfamily H5029_13970 PF13533 Biotin-lipoyl like H5029_13975 PF03061 Thioesterase superfamily H5029_13980 PF00490 Delta-aminolevulinic acid dehydratase H5029_13985 PF01266 FAD dependent oxidoreductase H5029_13990 PF01370 NAD dependent epimerase/dehydratase family H5029_13990 PF08338 Domain of unknown function (DUF1731) H5029_14010 PF12320 Type 5 capsule protein repressor C-terminal domain H5029_14010 PF00149 Calcineurin-like phosphoesterase H5029_14020 PF01168 Alanine racemase, N-terminal domain H5029_14025 PF00437 Type II/IV secretion system protein H5029_14030 PF00437 Type II/IV secretion system protein H5029_14035 PF01475 Ferric uptake regulator family H5029_14040 PF04355 SmpA / OmlA family H5029_14045 PF03658 RnfH family Ubiquitin H5029_14055 PF01814 Hemerythrin HHE cation binding domain H5029_14060 PF13230 Glutamine amidotransferases class-II H5029_14070 PF00696 Amino acid kinase family H5029_14075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H5029_14075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H5029_14075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H5029_14075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H5029_14080 PF00692 dUTPase H5029_14085 PF13361 UvrD-like helicase C-terminal domain H5029_14085 PF00580 UvrD/REP helicase N-terminal domain H5029_14090 PF00691 OmpA family H5029_14090 PF13488 Glycine zipper H5029_14095 PF01553 Acyltransferase H5029_14105 PF03775 Septum formation inhibitor MinC, C-terminal domain H5029_14110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H5029_14115 PF03776 Septum formation topological specificity factor MinE H5029_14130 PF01810 LysE type translocator H5029_14135 PF09397 Ftsk gamma domain H5029_14135 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H5029_14135 PF01580 FtsK/SpoIIIE family H5029_14135 PF17854 FtsK alpha domain H5029_14140 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_14145 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H5029_14150 PF04377 Arginine-tRNA-protein transferase, C terminus H5029_14150 PF04376 Arginine-tRNA-protein transferase, N terminus H5029_14155 PF00583 Acetyltransferase (GNAT) family H5029_14170 PF03143 Elongation factor Tu C-terminal domain H5029_14170 PF03144 Elongation factor Tu domain 2 H5029_14170 PF00009 Elongation factor Tu GTP binding domain H5029_14175 PF14492 Elongation Factor G, domain II H5029_14175 PF03764 Elongation factor G, domain IV H5029_14175 PF00009 Elongation factor Tu GTP binding domain H5029_14175 PF03144 Elongation factor Tu domain 2 H5029_14175 PF00679 Elongation factor G C-terminus H5029_14180 PF00177 Ribosomal protein S7p/S5e H5029_14185 PF00164 Ribosomal protein S12/S23 H5029_14195 PF02801 Beta-ketoacyl synthase, C-terminal domain H5029_14195 PF00109 Beta-ketoacyl synthase, N-terminal domain H5029_14200 PF03653 Uncharacterised protein family (UPF0093) H5029_14205 PF05726 Pirin C-terminal cupin domain H5029_14205 PF02678 Pirin H5029_14215 PF00795 Carbon-nitrogen hydrolase H5029_14215 PF02540 NAD synthase H5029_14230 PF00111 2Fe-2S iron-sulfur cluster binding domain H5029_14230 PF00175 Oxidoreductase NAD-binding domain H5029_14230 PF00970 Oxidoreductase FAD-binding domain H5029_14235 PF00171 Aldehyde dehydrogenase family H5029_14240 PF00355 Rieske [2Fe-2S] domain H5029_14240 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H5029_14245 PF07859 alpha/beta hydrolase fold H5029_14250 PF02028 BCCT, betaine/carnitine/choline family transporter H5029_14255 PF00180 Isocitrate/isopropylmalate dehydrogenase H5029_14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_14260 PF03466 LysR substrate binding domain H5029_14280 PF00037 4Fe-4S binding domain H5029_14285 PF01467 Cytidylyltransferase-like H5029_14290 PF01668 SmpB protein H5029_14295 PF03358 NADPH-dependent FMN reductase H5029_14300 PF02578 Multi-copper polyphenol oxidoreductase laccase H5029_14305 PF00849 RNA pseudouridylate synthase H5029_14305 PF01479 S4 domain H5029_14310 PF13525 Outer membrane lipoprotein H5029_14315 PF08275 DNA primase catalytic core, N-terminal domain H5029_14315 PF08278 DNA primase DnaG DnaB-binding H5029_14315 PF01807 CHC2 zinc finger H5029_14315 PF10410 DnaB-helicase binding domain of primase H5029_14320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H5029_14320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H5029_14320 PF01488 Shikimate / quinate 5-dehydrogenase H5029_14330 PF03550 Outer membrane lipoprotein LolB H5029_14335 PF08544 GHMP kinases C terminal H5029_14335 PF00288 GHMP kinases N terminal domain H5029_14360 PF14572 Phosphoribosyl synthetase-associated domain H5029_14360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H5029_14365 PF01386 Ribosomal L25p family H5029_14370 PF01195 Peptidyl-tRNA hydrolase H5029_14375 PF02261 Aspartate decarboxylase H5029_14390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H5029_14400 PF08543 Phosphomethylpyrimidine kinase H5029_14400 PF03070 TENA/THI-4/PQQC family H5029_14400 PF02581 Thiamine monophosphate synthase H5029_14405 PF01476 LysM domain H5029_14405 PF04972 BON domain H5029_14410 PF00550 Phosphopantetheine attachment site H5029_14420 PF00698 Acyl transferase domain H5029_14425 PF01783 Ribosomal L32p protein family H5029_14430 PF02620 Large ribosomal RNA subunit accumulation protein YceD H5029_14435 PF04315 Elongation factor P hydroxylase H5029_14440 PF01300 Telomere recombination H5029_14445 PF02616 Segregation and condensation protein ScpA H5029_14450 PF04079 Segregation and condensation complex subunit ScpB H5029_14455 PF00849 RNA pseudouridylate synthase H5029_14455 PF01479 S4 domain H5029_14470 PF00155 Aminotransferase class I and II H5029_14475 PF04055 Radical SAM superfamily H5029_14475 PF00202 Aminotransferase class-III H5029_14475 PF06968 Biotin and Thiamin Synthesis associated domain H5029_14480 PF12697 Alpha/beta hydrolase family H5029_14480 PF08241 Methyltransferase domain H5029_14485 PF02358 Trehalose-phosphatase H5029_14490 PF00982 Glycosyltransferase family 20 H5029_14495 PF07690 Major Facilitator Superfamily H5029_14500 PF00210 Ferritin-like domain H5029_14505 PF12826 Helix-hairpin-helix motif H5029_14505 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H5029_14505 PF03120 NAD-dependent DNA ligase OB-fold domain H5029_14505 PF01653 NAD-dependent DNA ligase adenylation domain H5029_14505 PF00533 BRCA1 C Terminus (BRCT) domain H5029_14515 PF02463 RecF/RecN/SMC N terminal domain H5029_14515 PF06470 SMC proteins Flexible Hinge Domain H5029_14525 PF01925 Sulfite exporter TauE/SafE H5029_14535 PF03309 Type III pantothenate kinase H5029_14540 PF00448 SRP54-type protein, GTPase domain H5029_14540 PF02881 SRP54-type protein, helical bundle domain H5029_14540 PF02978 Signal peptide binding domain H5029_14550 PF01207 Dihydrouridine synthase (Dus) H5029_14580 PF00692 dUTPase H5029_14595 PF01048 Phosphorylase superfamily H5029_14600 PF10609 NUBPL iron-transfer P-loop NTPase H5029_14610 PF09334 tRNA synthetases class I (M) H5029_14610 PF01588 Putative tRNA binding domain H5029_14635 PF13533 Biotin-lipoyl like H5029_14640 PF00291 Pyridoxal-phosphate dependent enzyme H5029_14655 PF05552 Conserved TM helix H5029_14670 PF00970 Oxidoreductase FAD-binding domain H5029_14670 PF00175 Oxidoreductase NAD-binding domain H5029_14675 PF03466 LysR substrate binding domain H5029_14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_14680 PF00313 'Cold-shock' DNA-binding domain H5029_14690 PF00361 Proton-conducting membrane transporter H5029_14695 PF00361 Proton-conducting membrane transporter H5029_14700 PF00361 Proton-conducting membrane transporter H5029_14700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H5029_14705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H5029_14710 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H5029_14715 PF12838 4Fe-4S dicluster domain H5029_14720 PF00146 NADH dehydrogenase H5029_14725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H5029_14725 PF00384 Molybdopterin oxidoreductase H5029_14725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H5029_14730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H5029_14730 PF10531 SLBB domain H5029_14730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H5029_14740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H5029_14740 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H5029_14745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H5029_14750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H5029_14755 PF00990 Diguanylate cyclase, GGDEF domain H5029_14755 PF17151 Periplasmic sensor domain H5029_14765 PF00512 His Kinase A (phospho-acceptor) domain H5029_14765 PF00672 HAMP domain H5029_14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_14770 PF00486 Transcriptional regulatory protein, C terminal H5029_14770 PF00072 Response regulator receiver domain H5029_14780 PF00317 Ribonucleotide reductase, all-alpha domain H5029_14780 PF03477 ATP cone domain H5029_14780 PF02867 Ribonucleotide reductase, barrel domain H5029_14790 PF00268 Ribonucleotide reductase, small chain H5029_14800 PF13755 Sensor N-terminal transmembrane domain H5029_14800 PF13756 Stimulus-sensing domain H5029_14800 PF00512 His Kinase A (phospho-acceptor) domain H5029_14800 PF00672 HAMP domain H5029_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_14870 PF13360 PQQ-like domain H5029_14870 PF01011 PQQ enzyme repeat H5029_14895 PF02567 Phenazine biosynthesis-like protein H5029_14915 PF01613 Flavin reductase like domain H5029_14920 PF01717 Cobalamin-independent synthase, Catalytic domain H5029_14920 PF08267 Cobalamin-independent synthase, N-terminal domain H5029_14930 PF03466 LysR substrate binding domain H5029_14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_14935 PF01810 LysE type translocator H5029_14945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H5029_14945 PF12833 Helix-turn-helix domain H5029_14950 PF07687 Peptidase dimerisation domain H5029_14950 PF01546 Peptidase family M20/M25/M40 H5029_14960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_14960 PF03466 LysR substrate binding domain H5029_14965 PF07690 Major Facilitator Superfamily H5029_14975 PF03466 LysR substrate binding domain H5029_14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_14980 PF14537 Cytochrome c3 H5029_14980 PF00890 FAD binding domain H5029_14990 PF02515 CoA-transferase family III H5029_14995 PF07690 Major Facilitator Superfamily H5029_15000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_15000 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_15000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_15005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_15005 PF03466 LysR substrate binding domain H5029_15010 PF00107 Zinc-binding dehydrogenase H5029_15010 PF08240 Alcohol dehydrogenase GroES-like domain H5029_15015 PF00962 Adenosine/AMP deaminase H5029_15040 PF02445 Quinolinate synthetase A protein H5029_15045 PF01960 ArgJ family H5029_15050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H5029_15050 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H5029_15055 PF00893 Small Multidrug Resistance protein H5029_15065 PF05275 Copper resistance protein B precursor (CopB) H5029_15070 PF07732 Multicopper oxidase H5029_15070 PF00394 Multicopper oxidase H5029_15070 PF07731 Multicopper oxidase H5029_15085 PF00834 Ribulose-phosphate 3 epimerase family H5029_15095 PF00756 Putative esterase H5029_15105 PF04445 Putative SAM-dependent methyltransferase H5029_15110 PF00814 Glycoprotease family H5029_15115 PF00132 Bacterial transferase hexapeptide (six repeats) H5029_15120 PF00293 NUDIX domain H5029_15165 PF00425 chorismate binding enzyme H5029_15165 PF04715 Anthranilate synthase component I, N terminal region H5029_15170 PF00155 Aminotransferase class I and II H5029_15175 PF00815 Histidinol dehydrogenase H5029_15180 PF01634 ATP phosphoribosyltransferase H5029_15185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H5029_15190 PF01722 BolA-like protein H5029_15195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H5029_15200 PF00309 Sigma-54 factor, Activator interacting domain (AID) H5029_15200 PF04552 Sigma-54, DNA binding domain H5029_15200 PF04963 Sigma-54 factor, core binding domain H5029_15245 PF00795 Carbon-nitrogen hydrolase H5029_15255 PF01047 MarR family H5029_15260 PF02566 OsmC-like protein H5029_15265 PF00437 Type II/IV secretion system protein H5029_15295 PF01612 3'-5' exonuclease H5029_15295 PF00476 DNA polymerase family A H5029_15295 PF01367 5'-3' exonuclease, C-terminal SAM fold H5029_15295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H5029_15300 PF02325 YGGT family H5029_15305 PF03807 NADP oxidoreductase coenzyme F420-dependent H5029_15305 PF14748 Pyrroline-5-carboxylate reductase dimerisation H5029_15310 PF01171 PP-loop family H5029_15310 PF09179 TilS substrate binding domain H5029_15310 PF11734 TilS substrate C-terminal domain H5029_15315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H5029_15320 PF02541 Ppx/GppA phosphatase family H5029_15325 PF00085 Thioredoxin H5029_15330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H5029_15330 PF07497 Rho termination factor, RNA-binding domain H5029_15330 PF07498 Rho termination factor, N-terminal domain H5029_15345 PF00216 Bacterial DNA-binding protein H5029_15350 PF01588 Putative tRNA binding domain H5029_15350 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H5029_15350 PF03484 tRNA synthetase B5 domain H5029_15350 PF03147 Ferredoxin-fold anticodon binding domain H5029_15350 PF03483 B3/4 domain H5029_15355 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H5029_15355 PF01409 tRNA synthetases class II core domain (F) H5029_15375 PF00453 Ribosomal protein L20 H5029_15380 PF01632 Ribosomal protein L35 H5029_15385 PF07690 Major Facilitator Superfamily H5029_15390 PF09335 SNARE associated Golgi protein H5029_15395 PF00043 Glutathione S-transferase, C-terminal domain H5029_15395 PF02798 Glutathione S-transferase, N-terminal domain H5029_15400 PF05198 Translation initiation factor IF-3, N-terminal domain H5029_15400 PF00707 Translation initiation factor IF-3, C-terminal domain H5029_15405 PF03129 Anticodon binding domain H5029_15405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H5029_15405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H5029_15405 PF02824 TGS domain H5029_15410 PF00501 AMP-binding enzyme H5029_15410 PF13193 AMP-binding enzyme C-terminal domain H5029_15415 PF04751 Protein of unknown function (DUF615) H5029_15420 PF00381 PTS HPr component phosphorylation site H5029_15425 PF03668 P-loop ATPase protein family H5029_15430 PF02569 Pantoate-beta-alanine ligase H5029_15435 PF02548 Ketopantoate hydroxymethyltransferase H5029_15440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H5029_15445 PF01743 Poly A polymerase head domain H5029_15445 PF12626 Polymerase A arginine-rich C-terminus H5029_15445 PF12627 Probable RNA and SrmB- binding site of polymerase A H5029_15455 PF03819 MazG nucleotide pyrophosphohydrolase domain H5029_15465 PF13291 ACT domain H5029_15465 PF04607 Region found in RelA / SpoT proteins H5029_15465 PF02824 TGS domain H5029_15470 PF05958 tRNA (Uracil-5-)-methyltransferase H5029_15480 PF00291 Pyridoxal-phosphate dependent enzyme H5029_15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_15485 PF00072 Response regulator receiver domain H5029_15485 PF00672 HAMP domain H5029_15485 PF00512 His Kinase A (phospho-acceptor) domain H5029_15485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H5029_15485 PF01627 Hpt domain H5029_15490 PF00378 Enoyl-CoA hydratase/isomerase H5029_15495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H5029_15495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H5029_15500 PF01261 Xylose isomerase-like TIM barrel H5029_15510 PF00106 short chain dehydrogenase H5029_15515 PF02233 NAD(P) transhydrogenase beta subunit H5029_15520 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H5029_15525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H5029_15525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H5029_15530 PF00892 EamA-like transporter family H5029_15540 PF07690 Major Facilitator Superfamily H5029_15545 PF01207 Dihydrouridine synthase (Dus) H5029_15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_15555 PF03466 LysR substrate binding domain H5029_15565 PF00899 ThiF family H5029_15570 PF00694 Aconitase C-terminal domain H5029_15570 PF00330 Aconitase family (aconitate hydratase) H5029_15575 PF01026 TatD related DNase H5029_15590 PF03144 Elongation factor Tu domain 2 H5029_15590 PF00009 Elongation factor Tu GTP binding domain H5029_15590 PF16658 Class II release factor RF3, C-terminal domain H5029_15610 PF03707 Bacterial signalling protein N terminal repeat H5029_15610 PF00990 Diguanylate cyclase, GGDEF domain H5029_15610 PF00563 EAL domain H5029_15615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H5029_15615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H5029_15620 PF10369 Small subunit of acetolactate synthase H5029_15625 PF00205 Thiamine pyrophosphate enzyme, central domain H5029_15625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H5029_15625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H5029_15640 PF13603 Leucyl-tRNA synthetase, Domain 2 H5029_15640 PF08264 Anticodon-binding domain of tRNA H5029_15640 PF09334 tRNA synthetases class I (M) H5029_15640 PF00133 tRNA synthetases class I (I, L, M and V) H5029_15655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H5029_15660 PF02687 FtsX-like permease family H5029_15660 PF00005 ABC transporter H5029_15660 PF12704 MacB-like periplasmic core domain H5029_15665 PF02321 Outer membrane efflux protein H5029_15680 PF00929 Exonuclease H5029_15685 PF03193 RsgA GTPase H5029_15695 PF00462 Glutaredoxin H5029_15700 PF02556 Preprotein translocase subunit SecB H5029_15710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H5029_15710 PF01926 50S ribosome-binding GTPase H5029_15715 PF13360 PQQ-like domain H5029_15725 PF03129 Anticodon binding domain H5029_15725 PF13393 Histidyl-tRNA synthetase H5029_15730 PF04551 GcpE protein H5029_15735 PF13464 Domain of unknown function (DUF4115) H5029_15745 PF04055 Radical SAM superfamily H5029_15750 PF00334 Nucleoside diphosphate kinase H5029_15755 PF04384 Iron-sulphur cluster assembly H5029_15760 PF01569 PAP2 superfamily H5029_15765 PF13439 Glycosyltransferase Family 4 H5029_15765 PF00534 Glycosyl transferases group 1 H5029_15770 PF11818 C-terminal domain of tail specific protease (DUF3340) H5029_15770 PF00595 PDZ domain H5029_15770 PF03572 Peptidase family S41 H5029_15770 PF17804 Tail specific protease N-terminal domain H5029_15775 PF00933 Glycosyl hydrolase family 3 N terminal domain H5029_15785 PF12697 Alpha/beta hydrolase family H5029_15790 PF00171 Aldehyde dehydrogenase family H5029_15795 PF00171 Aldehyde dehydrogenase family H5029_15800 PF01202 Shikimate kinase H5029_15805 PF02447 GntP family permease H5029_15810 PF01081 KDPG and KHG aldolase H5029_15815 PF00920 Dehydratase family H5029_15820 PF00871 Acetokinase family H5029_15825 PF01515 Phosphate acetyl/butaryl transferase H5029_15825 PF07085 DRTGG domain H5029_15830 PF05681 Fumarate hydratase (Fumerase) H5029_15830 PF05683 Fumarase C-terminus H5029_15845 PF06689 ClpX C4-type zinc finger H5029_15845 PF10431 C-terminal, D2-small domain, of ClpB protein H5029_15845 PF07724 AAA domain (Cdc48 subfamily) H5029_15850 PF00574 Clp protease H5029_15855 PF05698 Bacterial trigger factor protein (TF) C-terminus H5029_15855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H5029_15855 PF05697 Bacterial trigger factor protein (TF) H5029_15860 PF00593 TonB dependent receptor H5029_15860 PF07715 TonB-dependent Receptor Plug Domain H5029_15865 PF13640 2OG-Fe(II) oxygenase superfamily H5029_15865 PF18331 PKHD-type hydroxylase C-terminal domain H5029_15870 PF00682 HMGL-like H5029_15870 PF08502 LeuA allosteric (dimerisation) domain H5029_15875 PF00561 alpha/beta hydrolase fold H5029_15880 PF00561 alpha/beta hydrolase fold H5029_15880 PF07021 Methionine biosynthesis protein MetW H5029_15890 PF01725 Ham1 family H5029_15900 PF02416 mttA/Hcf106 family H5029_15905 PF02416 mttA/Hcf106 family H5029_15910 PF00902 Sec-independent protein translocase protein (TatC) H5029_15930 PF01790 Prolipoprotein diacylglyceryl transferase H5029_15945 PF00303 Thymidylate synthase H5029_15950 PF00186 Dihydrofolate reductase H5029_15960 PF01625 Peptide methionine sulfoxide reductase H5029_15970 PF01618 MotA/TolQ/ExbB proton channel family H5029_15980 PF01842 ACT domain H5029_15980 PF00551 Formyl transferase H5029_15990 PF00171 Aldehyde dehydrogenase family H5029_15995 PF00830 Ribosomal L28 family H5029_16000 PF00471 Ribosomal protein L33 H5029_16005 PF02254 TrkA-N domain H5029_16005 PF00999 Sodium/hydrogen exchanger family H5029_16025 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) H5029_16030 PF00580 UvrD/REP helicase N-terminal domain H5029_16030 PF13361 UvrD-like helicase C-terminal domain H5029_16045 PF01131 DNA topoisomerase H5029_16045 PF08272 Topoisomerase I zinc-ribbon-like H5029_16045 PF01751 Toprim domain H5029_16045 PF01396 Topoisomerase DNA binding C4 zinc finger H5029_16055 PF01638 HxlR-like helix-turn-helix H5029_16060 PF08240 Alcohol dehydrogenase GroES-like domain H5029_16060 PF00107 Zinc-binding dehydrogenase H5029_16065 PF04102 SlyX H5029_16070 PF00005 ABC transporter H5029_16070 PF16326 ABC transporter C-terminal domain H5029_16070 PF12848 ABC transporter H5029_16075 PF01810 LysE type translocator H5029_16080 PF03279 Bacterial lipid A biosynthesis acyltransferase H5029_16090 PF00375 Sodium:dicarboxylate symporter family H5029_16100 PF01118 Semialdehyde dehydrogenase, NAD binding domain H5029_16100 PF02774 Semialdehyde dehydrogenase, dimerisation domain H5029_16115 PF17763 Glutaminase/Asparaginase C-terminal domain H5029_16115 PF00710 Asparaginase, N-terminal H5029_16120 PF01416 tRNA pseudouridine synthase H5029_16130 PF01176 Translation initiation factor 1A / IF-1 H5029_16145 PF00180 Isocitrate/isopropylmalate dehydrogenase H5029_16155 PF00694 Aconitase C-terminal domain H5029_16160 PF00330 Aconitase family (aconitate hydratase) H5029_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_16170 PF03466 LysR substrate binding domain H5029_16180 PF00293 NUDIX domain H5029_16185 PF00391 PEP-utilising enzyme, mobile domain H5029_16185 PF02896 PEP-utilising enzyme, TIM barrel domain H5029_16185 PF05524 PEP-utilising enzyme, N-terminal H5029_16185 PF01590 GAF domain H5029_16190 PF00141 Peroxidase H5029_16195 PF12706 Beta-lactamase superfamily domain H5029_16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_16200 PF03466 LysR substrate binding domain H5029_16210 PF02798 Glutathione S-transferase, N-terminal domain H5029_16215 PF08279 HTH domain H5029_16215 PF13280 WYL domain H5029_16220 PF13419 Haloacid dehalogenase-like hydrolase H5029_16225 PF01479 S4 domain H5029_16225 PF00849 RNA pseudouridylate synthase H5029_16230 PF00575 S1 RNA binding domain H5029_16230 PF12111 Polyribonucleotide phosphorylase C terminal H5029_16230 PF10150 Ribonuclease E/G family H5029_16235 PF13193 AMP-binding enzyme C-terminal domain H5029_16235 PF00501 AMP-binding enzyme H5029_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H5029_16250 PF03466 LysR substrate binding domain H5029_16260 PF04055 Radical SAM superfamily H5029_16260 PF06969 HemN C-terminal domain H5029_16270 PF01554 MatE H5029_16275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_16275 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H5029_16275 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_16280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H5029_16280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_16285 PF03109 ABC1 family H5029_16290 PF01197 Ribosomal protein L31 H5029_16305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H5029_16315 PF07992 Pyridine nucleotide-disulphide oxidoreductase H5029_16315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H5029_16315 PF13247 4Fe-4S dicluster domain H5029_16325 PF03884 DNA gyrase inhibitor YacG H5029_16330 PF00753 Metallo-beta-lactamase superfamily H5029_16335 PF00762 Ferrochelatase H5029_16345 PF01177 Asp/Glu/Hydantoin racemase H5029_16365 PF01206 Sulfurtransferase TusA H5029_16370 PF00571 CBS domain H5029_16370 PF03471 Transporter associated domain H5029_16375 PF00795 Carbon-nitrogen hydrolase H5029_16380 PF01588 Putative tRNA binding domain H5029_16390 PF07963 Prokaryotic N-terminal methylation motif H5029_16390 PF08334 Type II secretion system (T2SS), protein G H5029_16395 PF00482 Type II secretion system (T2SS), protein F H5029_16400 PF00270 DEAD/DEAH box helicase H5029_16400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H5029_16400 PF18074 Primosomal protein N C-terminal domain H5029_16400 PF17764 3′ DNA-binding domain (3′BD) H5029_16400 PF00271 Helicase conserved C-terminal domain H5029_16405 PF00999 Sodium/hydrogen exchanger family H5029_16405 PF02254 TrkA-N domain H5029_16410 PF01430 Hsp33 protein H5029_16420 PF00226 DnaJ domain H5029_16420 PF01556 DnaJ C terminal domain H5029_16430 PF01544 CorA-like Mg2+ transporter protein H5029_16435 PF03725 3' exoribonuclease family, domain 2 H5029_16435 PF01138 3' exoribonuclease family, domain 1 H5029_16435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H5029_16435 PF00575 S1 RNA binding domain H5029_16435 PF00013 KH domain H5029_16440 PF00312 Ribosomal protein S15 H5029_16450 PF00144 Beta-lactamase H5029_16455 PF13538 UvrD-like helicase C-terminal domain H5029_16460 PF00580 UvrD/REP helicase N-terminal domain H5029_16460 PF13361 UvrD-like helicase C-terminal domain H5029_16460 PF12705 PD-(D/E)XK nuclease superfamily H5029_16465 PF17946 RecC C-terminal domain H5029_16475 PF03976 Polyphosphate kinase 2 (PPK2) H5029_16485 PF01209 ubiE/COQ5 methyltransferase family H5029_16495 PF03109 ABC1 family H5029_16500 PF01494 FAD binding domain H5029_16505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H5029_16510 PF01502 Phosphoribosyl-AMP cyclohydrolase H5029_16525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H5029_16525 PF00361 Proton-conducting membrane transporter H5029_16525 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H5029_16525 PF13244 Domain of unknown function (DUF4040) H5029_16530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H5029_16535 PF00361 Proton-conducting membrane transporter H5029_16540 PF01899 Na+/H+ ion antiporter subunit H5029_16545 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H5029_16550 PF03334 Na+/H+ antiporter subunit H5029_16555 PF02033 Ribosome-binding factor A H5029_16560 PF04760 Translation initiation factor IF-2, N-terminal region H5029_16560 PF08364 Bacterial translation initiation factor IF-2 associated region H5029_16560 PF11987 Translation-initiation factor 2 H5029_16560 PF00009 Elongation factor Tu GTP binding domain H5029_16565 PF13184 NusA-like KH domain H5029_16565 PF08529 NusA N-terminal domain H5029_16565 PF00575 S1 RNA binding domain H5029_16570 PF02576 RimP N-terminal domain H5029_16570 PF17384 RimP C-terminal SH3 domain H5029_16590 PF03840 Preprotein translocase SecG subunit H5029_16595 PF00121 Triosephosphate isomerase H5029_16600 PF00437 Type II/IV secretion system protein H5029_16600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H5029_16605 PF00482 Type II secretion system (T2SS), protein F H5029_16610 PF01478 Type IV leader peptidase family H5029_16610 PF06750 Bacterial Peptidase A24 N-terminal domain H5029_16615 PF01121 Dephospho-CoA kinase H5029_16625 PF08032 RNA 2'-O ribose methyltransferase substrate binding H5029_16625 PF00588 SpoU rRNA Methylase family H5029_16630 PF06865 Pyrimidine/purine nucleoside phosphorylase H5029_16640 PF02463 RecF/RecN/SMC N terminal domain H5029_16645 PF02622 Uncharacterized ACR, COG1678 H5029_16650 PF03652 Holliday junction resolvase H5029_16655 PF13533 Biotin-lipoyl like H5029_16680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H5029_16680 PF02805 Metal binding domain of Ada H5029_16680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H5029_16680 PF12833 Helix-turn-helix domain H5029_16685 PF01066 CDP-alcohol phosphatidyltransferase H5029_16695 PF02151 UvrB/uvrC motif H5029_16695 PF08459 UvrC Helix-hairpin-helix N-terminal H5029_16695 PF01541 GIY-YIG catalytic domain H5029_16710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H5029_16710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H5029_16710 PF00378 Enoyl-CoA hydratase/isomerase H5029_16715 PF02803 Thiolase, C-terminal domain H5029_16715 PF00108 Thiolase, N-terminal domain H5029_16730 PF09278 MerR, DNA binding H5029_16730 PF00376 MerR family regulatory protein H5029_16740 PF01323 DSBA-like thioredoxin domain H5029_16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_16755 PF00183 Hsp90 protein H5029_16770 PF13726 Na+-H+ antiporter family H5029_16770 PF03553 Na+/H+ antiporter family H5029_16795 PF05000 RNA polymerase Rpb1, domain 4 H5029_16795 PF04983 RNA polymerase Rpb1, domain 3 H5029_16795 PF04997 RNA polymerase Rpb1, domain 1 H5029_16795 PF00623 RNA polymerase Rpb1, domain 2 H5029_16795 PF04998 RNA polymerase Rpb1, domain 5 H5029_16800 PF04560 RNA polymerase Rpb2, domain 7 H5029_16800 PF00562 RNA polymerase Rpb2, domain 6 H5029_16800 PF10385 RNA polymerase beta subunit external 1 domain H5029_16800 PF04565 RNA polymerase Rpb2, domain 3 H5029_16800 PF04561 RNA polymerase Rpb2, domain 2 H5029_16800 PF04563 RNA polymerase beta subunit H5029_16805 PF00542 Ribosomal protein L7/L12 C-terminal domain H5029_16805 PF16320 Ribosomal protein L7/L12 dimerisation domain H5029_16810 PF00466 Ribosomal protein L10 H5029_16815 PF00687 Ribosomal protein L1p/L10e family H5029_16820 PF03946 Ribosomal protein L11, N-terminal domain H5029_16820 PF00298 Ribosomal protein L11, RNA binding domain H5029_16825 PF02357 Transcription termination factor nusG H5029_16825 PF00467 KOW motif H5029_16830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H5029_16840 PF03143 Elongation factor Tu C-terminal domain H5029_16840 PF03144 Elongation factor Tu domain 2 H5029_16840 PF00009 Elongation factor Tu GTP binding domain H5029_16865 PF04715 Anthranilate synthase component I, N terminal region H5029_16865 PF00425 chorismate binding enzyme H5029_16870 PF13419 Haloacid dehalogenase-like hydrolase H5029_16875 PF00498 FHA domain H5029_16875 PF12401 Protein of unknown function (DUF2662) H5029_16880 PF03958 Bacterial type II/III secretion system short domain H5029_16880 PF00263 Bacterial type II and III secretion system protein H5029_16895 PF00816 H-NS histone family H5029_16920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H5029_16920 PF03900 Porphobilinogen deaminase, C-terminal domain H5029_16925 PF04397 LytTr DNA-binding domain H5029_16925 PF00072 Response regulator receiver domain H5029_16930 PF06580 Histidine kinase H5029_16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_16930 PF07694 5TMR of 5TMR-LYT H5029_16935 PF14698 Argininosuccinate lyase C-terminal H5029_16935 PF00206 Lyase H5029_16940 PF04362 Bacterial Fe(2+) trafficking H5029_16945 PF01895 PhoU domain H5029_16955 PF00892 EamA-like transporter family H5029_16970 PF13667 ThiC-associated domain H5029_16970 PF01964 Radical SAM ThiC family H5029_16975 PF00293 NUDIX domain H5029_16980 PF00149 Calcineurin-like phosphoesterase H5029_16985 PF01258 Prokaryotic dksA/traR C4-type zinc finger H5029_16990 PF00749 tRNA synthetases class I (E and Q), catalytic domain H5029_16995 PF01098 Cell cycle protein H5029_17000 PF02875 Mur ligase family, glutamate ligase domain H5029_17000 PF08245 Mur ligase middle domain H5029_17010 PF07670 Nucleoside recognition H5029_17010 PF02421 Ferrous iron transport protein B H5029_17010 PF07664 Ferrous iron transport protein B C terminus H5029_17020 PF00589 Phage integrase family H5029_17020 PF02899 Phage integrase, N-terminal SAM-like domain H5029_17025 PF13098 Thioredoxin-like domain H5029_17025 PF10411 Disulfide bond isomerase protein N-terminus H5029_17030 PF03447 Homoserine dehydrogenase, NAD binding domain H5029_17030 PF00742 Homoserine dehydrogenase H5029_17030 PF01842 ACT domain H5029_17035 PF00291 Pyridoxal-phosphate dependent enzyme H5029_17040 PF00768 D-alanyl-D-alanine carboxypeptidase H5029_17045 PF00196 Bacterial regulatory proteins, luxR family H5029_17045 PF00072 Response regulator receiver domain H5029_17050 PF00512 His Kinase A (phospho-acceptor) domain H5029_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H5029_17055 PF00158 Sigma-54 interaction domain H5029_17055 PF00072 Response regulator receiver domain H5029_17055 PF02954 Bacterial regulatory protein, Fis family H5029_17060 PF00595 PDZ domain H5029_17060 PF03572 Peptidase family S41 H5029_17065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H5029_17065 PF01676 Metalloenzyme superfamily H5029_17070 PF03739 Lipopolysaccharide export system permease LptF/LptG H5029_17080 PF02789 Cytosol aminopeptidase family, N-terminal domain H5029_17080 PF00883 Cytosol aminopeptidase family, catalytic domain H5029_17100 PF00677 Lumazine binding domain H5029_17110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H5029_17110 PF01872 RibD C-terminal domain H5029_17115 PF03477 ATP cone domain H5029_17120 PF00909 Ammonium Transporter Family H5029_17125 PF00543 Nitrogen regulatory protein P-II H5029_17135 PF13335 Magnesium chelatase, subunit ChlI C-terminal H5029_17135 PF01078 Magnesium chelatase, subunit ChlI H5029_17145 PF01740 STAS domain H5029_17145 PF00916 Sulfate permease family H5029_17150 PF00582 Universal stress protein family H5029_17180 PF00665 Integrase core domain H5029_17190 PF01078 Magnesium chelatase, subunit ChlI H5029_17190 PF13335 Magnesium chelatase, subunit ChlI C-terminal H5029_17195 PF00155 Aminotransferase class I and II H5029_17195 PF00392 Bacterial regulatory proteins, gntR family H5029_17205 PF00701 Dihydrodipicolinate synthetase family H5029_17215 PF03573 outer membrane porin, OprD family H5029_17220 PF00719 Inorganic pyrophosphatase H5029_17235 PF00501 AMP-binding enzyme H5029_17235 PF13193 AMP-binding enzyme C-terminal domain H5029_17240 PF03989 DNA gyrase C-terminal domain, beta-propeller H5029_17240 PF00521 DNA gyrase/topoisomerase IV, subunit A H5029_17245 PF07690 Major Facilitator Superfamily H5029_17250 PF03458 UPF0126 domain H5029_17255 PF02810 SEC-C motif H5029_17260 PF03471 Transporter associated domain H5029_17260 PF03741 Integral membrane protein TerC family H5029_17265 PF03641 Possible lysine decarboxylase H5029_17270 PF07690 Major Facilitator Superfamily H5029_17280 PF00817 impB/mucB/samB family H5029_17280 PF11799 impB/mucB/samB family C-terminal domain H5029_17280 PF11798 IMS family HHH motif H5029_17295 PF08497 Radical SAM N-terminal H5029_17295 PF04055 Radical SAM superfamily H5029_17295 PF11842 Domain of unknown function (DUF3362) H5029_17315 PF03358 NADPH-dependent FMN reductase H5029_17325 PF00291 Pyridoxal-phosphate dependent enzyme H5029_17360 PF00440 Bacterial regulatory proteins, tetR family H5029_17385 PF01327 Polypeptide deformylase H5029_17395 PF17782 DprA winged helix domain H5029_17395 PF02481 DNA recombination-mediator protein A H5029_17400 PF01300 Telomere recombination H5029_17405 PF00892 EamA-like transporter family H5029_17410 PF00440 Bacterial regulatory proteins, tetR family H5029_17415 PF07690 Major Facilitator Superfamily H5029_17425 PF00255 Glutathione peroxidase H5029_17435 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H5029_17440 PF02874 ATP synthase alpha/beta family, beta-barrel domain H5029_17440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H5029_17445 PF00231 ATP synthase H5029_17450 PF02874 ATP synthase alpha/beta family, beta-barrel domain H5029_17450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H5029_17450 PF00306 ATP synthase alpha/beta chain, C terminal domain H5029_17455 PF00213 ATP synthase delta (OSCP) subunit H5029_17460 PF00430 ATP synthase B/B' CF(0) H5029_17465 PF00137 ATP synthase subunit C H5029_17470 PF00119 ATP synthase A chain H5029_17490 PF00005 ABC transporter H5029_17495 PF00950 ABC 3 transport family H5029_17500 PF01810 LysE type translocator H5029_17505 PF04261 Dyp-type peroxidase family H5029_17510 PF00390 Malic enzyme, N-terminal domain H5029_17510 PF03949 Malic enzyme, NAD binding domain H5029_17515 PF03485 Arginyl tRNA synthetase N terminal domain H5029_17515 PF00750 tRNA synthetases class I (R) H5029_17515 PF05746 DALR anticodon binding domain H5029_17535 PF02678 Pirin H5029_17535 PF05726 Pirin C-terminal cupin domain H5029_17545 PF03551 Transcriptional regulator PadR-like family H5029_17550 PF13427 Domain of unknown function (DUF4111) H5029_17550 PF01909 Nucleotidyltransferase domain H5029_17555 PF00117 Glutamine amidotransferase class-I H5029_17555 PF00958 GMP synthase C terminal domain H5029_17555 PF02540 NAD synthase H5029_17560 PF04286 Protein of unknown function (DUF445) H5029_17565 PF07681 DoxX H5029_17570 PF09335 SNARE associated Golgi protein H5029_17585 PF13614 AAA domain H5029_17595 PF01722 BolA-like protein H5029_17610 PF01648 4'-phosphopantetheinyl transferase superfamily H5029_17615 PF16363 GDP-mannose 4,6 dehydratase H5029_17630 PF00668 Condensation domain H5029_17630 PF13193 AMP-binding enzyme C-terminal domain H5029_17630 PF00501 AMP-binding enzyme H5029_17630 PF00550 Phosphopantetheine attachment site H5029_17630 PF00975 Thioesterase domain H5029_17635 PF16197 Ketoacyl-synthetase C-terminal extension H5029_17635 PF00109 Beta-ketoacyl synthase, N-terminal domain H5029_17635 PF02801 Beta-ketoacyl synthase, C-terminal domain H5029_17635 PF08242 Methyltransferase domain H5029_17635 PF00550 Phosphopantetheine attachment site H5029_17635 PF14765 Polyketide synthase dehydratase H5029_17635 PF00975 Thioesterase domain H5029_17640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_17640 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_17640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_17645 PF00501 AMP-binding enzyme H5029_17650 PF03472 Autoinducer binding domain H5029_17650 PF00196 Bacterial regulatory proteins, luxR family H5029_17660 PF00765 Autoinducer synthase H5029_17665 PF07690 Major Facilitator Superfamily H5029_17665 PF00083 Sugar (and other) transporter H5029_17670 PF00378 Enoyl-CoA hydratase/isomerase H5029_17675 PF00378 Enoyl-CoA hydratase/isomerase H5029_17680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H5029_17680 PF02770 Acyl-CoA dehydrogenase, middle domain H5029_17680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H5029_17685 PF13193 AMP-binding enzyme C-terminal domain H5029_17685 PF00501 AMP-binding enzyme H5029_17690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H5029_17690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H5029_17695 PF00171 Aldehyde dehydrogenase family H5029_17705 PF00324 Amino acid permease H5029_17710 PF00324 Amino acid permease H5029_17715 PF01042 Endoribonuclease L-PSP H5029_17720 PF00842 Alanine racemase, C-terminal domain H5029_17720 PF01168 Alanine racemase, N-terminal domain H5029_17725 PF01266 FAD dependent oxidoreductase H5029_17730 PF01037 Lrp/AsnC ligand binding domain H5029_17740 PF00593 TonB dependent receptor H5029_17740 PF07715 TonB-dependent Receptor Plug Domain H5029_17755 PF00849 RNA pseudouridylate synthase H5029_17800 PF00330 Aconitase family (aconitate hydratase) H5029_17800 PF00694 Aconitase C-terminal domain H5029_17805 PF00285 Citrate synthase, C-terminal domain H5029_17815 PF07729 FCD domain H5029_17815 PF00392 Bacterial regulatory proteins, gntR family H5029_17825 PF00155 Aminotransferase class I and II H5029_17830 PF09330 D-lactate dehydrogenase, membrane binding H5029_17830 PF01565 FAD binding domain H5029_17835 PF01070 FMN-dependent dehydrogenase H5029_17840 PF00392 Bacterial regulatory proteins, gntR family H5029_17840 PF07729 FCD domain H5029_17845 PF02652 L-lactate permease H5029_17850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H5029_17850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H5029_17850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H5029_17850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H5029_17860 PF16363 GDP-mannose 4,6 dehydratase H5029_17865 PF00342 Phosphoglucose isomerase H5029_17870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H5029_17870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H5029_17870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H5029_17875 PF00483 Nucleotidyl transferase H5029_17880 PF02397 Bacterial sugar transferase H5029_17885 PF00535 Glycosyl transferase family 2 H5029_17890 PF00534 Glycosyl transferases group 1 H5029_17900 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase H5029_17900 PF00535 Glycosyl transferase family 2 H5029_17905 PF00535 Glycosyl transferase family 2 H5029_17905 PF01501 Glycosyl transferase family 8 H5029_17915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H5029_17915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H5029_17915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H5029_17920 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H5029_17920 PF02563 Polysaccharide biosynthesis/export protein H5029_17920 PF10531 SLBB domain H5029_17925 PF01451 Low molecular weight phosphotyrosine protein phosphatase H5029_17930 PF02706 Chain length determinant protein H5029_17930 PF13807 G-rich domain on putative tyrosine kinase H5029_17930 PF13614 AAA domain H5029_17935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H5029_17935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H5029_17940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H5029_17940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H5029_17945 PF03023 Lipid II flippase MurJ H5029_17950 PF01510 N-acetylmuramoyl-L-alanine amidase H5029_17955 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H5029_17955 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H5029_17965 PF05506 Domain of unknown function (DUF756) H5029_17965 PF04185 Phosphoesterase family H5029_17970 PF01138 3' exoribonuclease family, domain 1 H5029_17970 PF03725 3' exoribonuclease family, domain 2 H5029_17975 PF00487 Fatty acid desaturase H5029_17980 PF00175 Oxidoreductase NAD-binding domain H5029_17985 PF00440 Bacterial regulatory proteins, tetR family H5029_17990 PF08360 QacR-like protein, C-terminal region H5029_17990 PF00440 Bacterial regulatory proteins, tetR family H5029_17995 PF01323 DSBA-like thioredoxin domain H5029_18005 PF13419 Haloacid dehalogenase-like hydrolase H5029_18010 PF00106 short chain dehydrogenase H5029_18025 PF00696 Amino acid kinase family H5029_18025 PF00583 Acetyltransferase (GNAT) family H5029_18030 PF09084 NMT1/THI5 like H5029_18035 PF09084 NMT1/THI5 like H5029_18040 PF00296 Luciferase-like monooxygenase H5029_18045 PF00528 Binding-protein-dependent transport system inner membrane component H5029_18050 PF00005 ABC transporter H5029_18055 PF08362 YcdC-like protein, C-terminal region H5029_18055 PF00440 Bacterial regulatory proteins, tetR family H5029_18060 PF01048 Phosphorylase superfamily H5029_18070 PF06574 FAD synthetase H5029_18070 PF01687 Riboflavin kinase H5029_18075 PF08264 Anticodon-binding domain of tRNA H5029_18075 PF00133 tRNA synthetases class I (I, L, M and V) H5029_18075 PF06827 Zinc finger found in FPG and IleRS H5029_18080 PF01252 Signal peptidase (SPase) II H5029_18085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H5029_18125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H5029_18130 PF07859 alpha/beta hydrolase fold H5029_18155 PF01025 GrpE H5029_18160 PF00012 Hsp70 protein H5029_18180 PF13406 Transglycosylase SLT domain H5029_18185 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H5029_18185 PF02222 ATP-grasp domain H5029_18190 PF00731 AIR carboxylase H5029_18200 PF01225 Mur ligase family, catalytic domain H5029_18200 PF08245 Mur ligase middle domain H5029_18200 PF02875 Mur ligase family, glutamate ligase domain H5029_18210 PF01569 PAP2 superfamily H5029_18215 PF03741 Integral membrane protein TerC family H5029_18225 PF03738 Glutathionylspermidine synthase preATP-grasp H5029_18230 PF00355 Rieske [2Fe-2S] domain H5029_18235 PF01979 Amidohydrolase family H5029_18240 PF00156 Phosphoribosyl transferase domain H5029_18250 PF13098 Thioredoxin-like domain H5029_18250 PF10411 Disulfide bond isomerase protein N-terminus H5029_18255 PF01545 Cation efflux family H5029_18255 PF16916 Dimerisation domain of Zinc Transporter H5029_18260 PF02583 Metal-sensitive transcriptional repressor H5029_18265 PF10396 GTP-binding protein TrmE N-terminus H5029_18265 PF12631 MnmE helical domain H5029_18265 PF01926 50S ribosome-binding GTPase H5029_18270 PF14849 YidC periplasmic domain H5029_18270 PF02096 60Kd inner membrane protein H5029_18275 PF01809 Putative membrane protein insertion efficiency factor H5029_18280 PF00825 Ribonuclease P H5029_18285 PF00468 Ribosomal protein L34 H5029_18320 PF00593 TonB dependent receptor H5029_18320 PF07715 TonB-dependent Receptor Plug Domain