locus-tag class description M3Q_10 PF02678 Pirin M3Q_10 PF05726 Pirin C-terminal cupin domain M3Q_100 PF05728 Uncharacterised protein family (UPF0227) M3Q_1000 PF01925 Sulfite exporter TauE/SafE M3Q_1002 PF06470 SMC proteins Flexible Hinge Domain M3Q_1002 PF02463 RecF/RecN/SMC N terminal domain M3Q_1004 PF00533 BRCA1 C Terminus (BRCT) domain M3Q_1004 PF03120 NAD-dependent DNA ligase OB-fold domain M3Q_1004 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M3Q_1004 PF12826 Helix-hairpin-helix motif M3Q_1004 PF01653 NAD-dependent DNA ligase adenylation domain M3Q_1005 PF00210 Ferritin-like domain M3Q_1006 PF07690 Major Facilitator Superfamily M3Q_1007 PF00982 Glycosyltransferase family 20 M3Q_1008 PF02358 Trehalose-phosphatase M3Q_1009 PF08241 Methyltransferase domain M3Q_1009 PF12697 Alpha/beta hydrolase family M3Q_1010 PF06968 Biotin and Thiamin Synthesis associated domain M3Q_1010 PF00202 Aminotransferase class-III M3Q_1010 PF04055 Radical SAM superfamily M3Q_1011 PF00155 Aminotransferase class I and II M3Q_1014 PF01479 S4 domain M3Q_1014 PF00849 RNA pseudouridylate synthase M3Q_1015 PF04079 Segregation and condensation complex subunit ScpB M3Q_1016 PF02616 Segregation and condensation protein ScpA M3Q_1017 PF01300 Telomere recombination M3Q_1018 PF04315 Elongation factor P hydroxylase M3Q_1019 PF02620 Large ribosomal RNA subunit accumulation protein YceD M3Q_1020 PF01783 Ribosomal L32p protein family M3Q_1021 PF00698 Acyl transferase domain M3Q_1023 PF00550 Phosphopantetheine attachment site M3Q_1024 PF01476 LysM domain M3Q_1024 PF04972 BON domain M3Q_1025 PF02581 Thiamine monophosphate synthase M3Q_1025 PF08543 Phosphomethylpyrimidine kinase M3Q_1027 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M3Q_1030 PF02261 Aspartate decarboxylase M3Q_1031 PF01195 Peptidyl-tRNA hydrolase M3Q_1032 PF01386 Ribosomal L25p family M3Q_1033 PF14572 Phosphoribosyl synthetase-associated domain M3Q_1033 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M3Q_1034 PF00288 GHMP kinases N terminal domain M3Q_1034 PF08544 GHMP kinases C terminal M3Q_1035 PF03550 Outer membrane lipoprotein LolB M3Q_1037 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M3Q_1037 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M3Q_1037 PF01488 Shikimate / quinate 5-dehydrogenase M3Q_1038 PF08278 DNA primase DnaG DnaB-binding M3Q_1038 PF10410 DnaB-helicase binding domain of primase M3Q_1038 PF08275 DNA primase catalytic core, N-terminal domain M3Q_1038 PF01807 CHC2 zinc finger M3Q_1039 PF13525 Outer membrane lipoprotein M3Q_1040 PF01479 S4 domain M3Q_1040 PF00849 RNA pseudouridylate synthase M3Q_1042 PF03358 NADPH-dependent FMN reductase M3Q_1043 PF01668 SmpB protein M3Q_1044 PF01467 Cytidylyltransferase-like M3Q_1045 PF00037 4Fe-4S binding domain M3Q_1047 PF03466 LysR substrate binding domain M3Q_1047 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1048 PF00180 Isocitrate/isopropylmalate dehydrogenase M3Q_1049 PF02028 BCCT, betaine/carnitine/choline family transporter M3Q_1050 PF07859 alpha/beta hydrolase fold M3Q_1051 PF00355 Rieske [2Fe-2S] domain M3Q_1051 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_1052 PF00171 Aldehyde dehydrogenase family M3Q_1053 PF00970 Oxidoreductase FAD-binding domain M3Q_1053 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_1053 PF00175 Oxidoreductase NAD-binding domain M3Q_1055 PF02540 NAD synthase M3Q_1055 PF00795 Carbon-nitrogen hydrolase M3Q_1057 PF05726 Pirin C-terminal cupin domain M3Q_1057 PF02678 Pirin M3Q_1059 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_1059 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_1061 PF00164 Ribosomal protein S12/S23 M3Q_1062 PF00177 Ribosomal protein S7p/S5e M3Q_1063 PF03764 Elongation factor G, domain IV M3Q_1063 PF00679 Elongation factor G C-terminus M3Q_1063 PF03144 Elongation factor Tu domain 2 M3Q_1063 PF14492 Elongation Factor G, domain II M3Q_1063 PF00009 Elongation factor Tu GTP binding domain M3Q_1064 PF03143 Elongation factor Tu C-terminal domain M3Q_1064 PF00009 Elongation factor Tu GTP binding domain M3Q_1064 PF03144 Elongation factor Tu domain 2 M3Q_1067 PF00583 Acetyltransferase (GNAT) family M3Q_1068 PF04377 Arginine-tRNA-protein transferase, C terminus M3Q_1068 PF04376 Arginine-tRNA-protein transferase, N terminus M3Q_1069 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M3Q_1070 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1071 PF01580 FtsK/SpoIIIE family M3Q_1071 PF09397 Ftsk gamma domain M3Q_1071 PF17854 FtsK alpha domain M3Q_1071 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M3Q_1072 PF01810 LysE type translocator M3Q_1075 PF03776 Septum formation topological specificity factor MinE M3Q_1076 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M3Q_1077 PF03775 Septum formation inhibitor MinC, C-terminal domain M3Q_1079 PF01553 Acyltransferase M3Q_1080 PF00691 OmpA family M3Q_1080 PF13488 Glycine zipper M3Q_1081 PF00580 UvrD/REP helicase N-terminal domain M3Q_1081 PF13361 UvrD-like helicase C-terminal domain M3Q_1082 PF00692 dUTPase M3Q_1083 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_1083 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3Q_1083 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_1083 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_1084 PF00696 Amino acid kinase family M3Q_1086 PF13230 Glutamine amidotransferases class-II M3Q_1087 PF01814 Hemerythrin HHE cation binding domain M3Q_1089 PF03658 RnfH family Ubiquitin M3Q_1090 PF04355 SmpA / OmlA family M3Q_1091 PF01475 Ferric uptake regulator family M3Q_1092 PF00437 Type II/IV secretion system protein M3Q_1093 PF00437 Type II/IV secretion system protein M3Q_1094 PF01168 Alanine racemase, N-terminal domain M3Q_1096 PF00149 Calcineurin-like phosphoesterase M3Q_1096 PF12320 Type 5 capsule protein repressor C-terminal domain M3Q_11 PF00857 Isochorismatase family M3Q_110 PF01471 Putative peptidoglycan binding domain M3Q_110 PF01510 N-acetylmuramoyl-L-alanine amidase M3Q_110 PF01476 LysM domain M3Q_1100 PF08338 Domain of unknown function (DUF1731) M3Q_1100 PF01370 NAD dependent epimerase/dehydratase family M3Q_1101 PF01266 FAD dependent oxidoreductase M3Q_1102 PF00490 Delta-aminolevulinic acid dehydratase M3Q_1103 PF03061 Thioesterase superfamily M3Q_1104 PF13533 Biotin-lipoyl like M3Q_1105 PF07690 Major Facilitator Superfamily M3Q_111 PF04717 Type VI secretion system, phage-baseplate injector M3Q_1119 PF00929 Exonuclease M3Q_1126 PF01381 Helix-turn-helix M3Q_1126 PF00717 Peptidase S24-like M3Q_113 PF02600 Disulfide bond formation protein DsbB M3Q_1135 PF00145 C-5 cytosine-specific DNA methylase M3Q_1137 PF01695 IstB-like ATP binding protein M3Q_114 PF04262 Glutamate-cysteine ligase M3Q_1146 PF07007 Lysozyme inhibitor LprI M3Q_117 PF04286 Protein of unknown function (DUF445) M3Q_1175 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M3Q_118 PF00155 Aminotransferase class I and II M3Q_1183 PF02768 DNA polymerase III beta subunit, C-terminal domain M3Q_1183 PF02767 DNA polymerase III beta subunit, central domain M3Q_1183 PF00712 DNA polymerase III beta subunit, N-terminal domain M3Q_119 PF01554 MatE M3Q_12 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_120 PF00106 short chain dehydrogenase M3Q_1207 PF00083 Sugar (and other) transporter M3Q_1208 PF00701 Dihydrodipicolinate synthetase family M3Q_1210 PF08281 Sigma-70, region 4 M3Q_1210 PF04542 Sigma-70 region 2 M3Q_1212 PF00593 TonB dependent receptor M3Q_1212 PF07715 TonB-dependent Receptor Plug Domain M3Q_1216 PF01126 Heme oxygenase M3Q_122 PF00072 Response regulator receiver domain M3Q_122 PF00486 Transcriptional regulatory protein, C terminal M3Q_1221 PF13520 Amino acid permease M3Q_1222 PF02574 Homocysteine S-methyltransferase M3Q_1224 PF06039 Malate:quinone oxidoreductase (Mqo) M3Q_1225 PF00732 GMC oxidoreductase M3Q_1225 PF05199 GMC oxidoreductase M3Q_1226 PF00171 Aldehyde dehydrogenase family M3Q_1227 PF00440 Bacterial regulatory proteins, tetR family M3Q_1227 PF13977 BetI-type transcriptional repressor, C-terminal M3Q_1228 PF02028 BCCT, betaine/carnitine/choline family transporter M3Q_1229 PF02028 BCCT, betaine/carnitine/choline family transporter M3Q_123 PF00989 PAS fold M3Q_123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_123 PF00512 His Kinase A (phospho-acceptor) domain M3Q_123 PF11808 Phosphate regulon sensor protein PhoR M3Q_1231 PF03061 Thioesterase superfamily M3Q_1233 PF07683 Cobalamin synthesis protein cobW C-terminal domain M3Q_1233 PF02492 CobW/HypB/UreG, nucleotide-binding domain M3Q_1234 PF00375 Sodium:dicarboxylate symporter family M3Q_1235 PF07152 YaeQ protein M3Q_1236 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_1237 PF14883 Hypothetical glycosyl hydrolase family 13 M3Q_1237 PF01522 Polysaccharide deacetylase M3Q_1238 PF00535 Glycosyl transferase family 2 M3Q_1240 PF00378 Enoyl-CoA hydratase/isomerase M3Q_1243 PF09339 IclR helix-turn-helix domain M3Q_1243 PF01614 Bacterial transcriptional regulator M3Q_1244 PF00355 Rieske [2Fe-2S] domain M3Q_1246 PF00355 Rieske [2Fe-2S] domain M3Q_1248 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_1249 PF14759 Reductase C-terminal M3Q_1249 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_125 PF02666 Phosphatidylserine decarboxylase M3Q_1250 PF07690 Major Facilitator Superfamily M3Q_1252 PF12697 Alpha/beta hydrolase family M3Q_1254 PF03447 Homoserine dehydrogenase, NAD binding domain M3Q_1254 PF01958 Domain of unknown function DUF108 M3Q_1255 PF00171 Aldehyde dehydrogenase family M3Q_1256 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3Q_1256 PF00205 Thiamine pyrophosphate enzyme, central domain M3Q_1256 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3Q_1258 PF07690 Major Facilitator Superfamily M3Q_1259 PF01327 Polypeptide deformylase M3Q_126 PF00581 Rhodanese-like domain M3Q_1260 PF04960 Glutaminase M3Q_1261 PF02311 AraC-like ligand binding domain M3Q_1261 PF12833 Helix-turn-helix domain M3Q_1262 PF07690 Major Facilitator Superfamily M3Q_1263 PF01263 Aldose 1-epimerase M3Q_1265 PF03466 LysR substrate binding domain M3Q_1265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1267 PF07690 Major Facilitator Superfamily M3Q_1268 PF00456 Transketolase, thiamine diphosphate binding domain M3Q_1269 PF02780 Transketolase, C-terminal domain M3Q_1269 PF02779 Transketolase, pyrimidine binding domain M3Q_127 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M3Q_127 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M3Q_1270 PF02574 Homocysteine S-methyltransferase M3Q_1270 PF02310 B12 binding domain M3Q_1270 PF02607 B12 binding domain M3Q_1270 PF00809 Pterin binding enzyme M3Q_1270 PF02965 Vitamin B12 dependent methionine synthase, activation domain M3Q_1271 PF01384 Phosphate transporter family M3Q_1272 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_1275 PF03781 Sulfatase-modifying factor enzyme 1 M3Q_1276 PF00884 Sulfatase M3Q_1278 PF01521 Iron-sulphur cluster biosynthesis M3Q_1278 PF01106 NifU-like domain M3Q_1279 PF07715 TonB-dependent Receptor Plug Domain M3Q_1279 PF00593 TonB dependent receptor M3Q_128 PF02580 D-Tyr-tRNA(Tyr) deacylase M3Q_1281 PF00561 alpha/beta hydrolase fold M3Q_1282 PF00484 Carbonic anhydrase M3Q_1283 PF13472 GDSL-like Lipase/Acylhydrolase family M3Q_1284 PF00005 ABC transporter M3Q_1286 PF01694 Rhomboid family M3Q_1287 PF00912 Transglycosylase M3Q_1288 PF17941 Polyphosphate kinase C-terminal domain 1 M3Q_1288 PF13090 Polyphosphate kinase C-terminal domain 2 M3Q_1288 PF13089 Polyphosphate kinase N-terminal domain M3Q_1288 PF02503 Polyphosphate kinase middle domain M3Q_1290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1290 PF03466 LysR substrate binding domain M3Q_1291 PF00561 alpha/beta hydrolase fold M3Q_1292 PF18113 Rubredoxin binding C-terminal domain M3Q_1292 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1293 PF00301 Rubredoxin M3Q_1296 PF00152 tRNA synthetases class II (D, K and N) M3Q_1296 PF01336 OB-fold nucleic acid binding domain M3Q_1297 PF14052 Capsule assembly protein Wzi M3Q_1299 PF01507 Phosphoadenosine phosphosulfate reductase family M3Q_13 PF00171 Aldehyde dehydrogenase family M3Q_1300 PF00009 Elongation factor Tu GTP binding domain M3Q_1303 PF03600 Citrate transporter M3Q_1304 PF03471 Transporter associated domain M3Q_1304 PF00571 CBS domain M3Q_1304 PF01595 Cyclin M transmembrane N-terminal domain M3Q_1305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1305 PF03466 LysR substrate binding domain M3Q_1306 PF00463 Isocitrate lyase family M3Q_1309 PF01774 UreD urease accessory protein M3Q_1310 PF00547 Urease, gamma subunit M3Q_1311 PF00699 Urease beta subunit M3Q_1312 PF00449 Urease alpha-subunit, N-terminal domain M3Q_1312 PF01979 Amidohydrolase family M3Q_1313 PF02814 UreE urease accessory protein, N-terminal domain M3Q_1313 PF05194 UreE urease accessory protein, C-terminal domain M3Q_1314 PF01730 UreF M3Q_1315 PF02492 CobW/HypB/UreG, nucleotide-binding domain M3Q_1318 PF00905 Penicillin binding protein transpeptidase domain M3Q_1318 PF03717 Penicillin-binding Protein dimerisation domain M3Q_1321 PF05191 Adenylate kinase, active site lid M3Q_1322 PF00633 Helix-hairpin-helix motif M3Q_1322 PF10576 Iron-sulfur binding domain of endonuclease III M3Q_1322 PF00730 HhH-GPD superfamily base excision DNA repair protein M3Q_1323 PF04060 Putative Fe-S cluster M3Q_1324 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M3Q_1324 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3Q_1326 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M3Q_1327 PF02590 Predicted SPOUT methyltransferase M3Q_1328 PF05362 Lon protease (S16) C-terminal proteolytic domain M3Q_1328 PF02190 ATP-dependent protease La (LON) substrate-binding domain M3Q_1328 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_1329 PF13018 Extended Signal Peptide of Type V secretion system M3Q_1329 PF03895 YadA-like membrane anchor domain M3Q_1329 PF05662 Coiled stalk of trimeric autotransporter adhesin M3Q_1329 PF05658 Head domain of trimeric autotransporter adhesin M3Q_133 PF00925 GTP cyclohydrolase II M3Q_133 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M3Q_1331 PF01812 5-formyltetrahydrofolate cyclo-ligase family M3Q_134 PF00885 6,7-dimethyl-8-ribityllumazine synthase M3Q_135 PF01029 NusB family M3Q_136 PF02769 AIR synthase related protein, C-terminal domain M3Q_136 PF00586 AIR synthase related protein, N-terminal domain M3Q_137 PF04608 Phosphatidylglycerophosphatase A M3Q_138 PF14602 Hexapeptide repeat of succinyl-transferase M3Q_138 PF12804 MobA-like NTP transferase domain M3Q_138 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_139 PF01380 SIS domain M3Q_1390 PF01476 LysM domain M3Q_1390 PF08525 Opacity-associated protein A N-terminal motif M3Q_1390 PF01551 Peptidase family M23 M3Q_1399 PF00884 Sulfatase M3Q_1399 PF08019 Phosphoethanolamine transferase EptA/EptB M3Q_14 PF00202 Aminotransferase class-III M3Q_140 PF01177 Asp/Glu/Hydantoin racemase M3Q_141 PF13419 Haloacid dehalogenase-like hydrolase M3Q_1410 PF01726 LexA DNA binding domain M3Q_1410 PF00717 Peptidase S24-like M3Q_1415 PF00772 DnaB-like helicase N terminal domain M3Q_1415 PF03796 DnaB-like helicase C terminal domain M3Q_143 PF00491 Arginase family M3Q_1434 PF04860 Phage portal protein M3Q_144 PF01979 Amidohydrolase family M3Q_1446 PF01551 Peptidase family M23 M3Q_1446 PF01464 Transglycosylase SLT domain M3Q_1446 PF10145 Phage-related minor tail protein M3Q_145 PF00324 Amino acid permease M3Q_146 PF00221 Aromatic amino acid lyase M3Q_1461 PF00557 Metallopeptidase family M24 M3Q_1461 PF05195 Aminopeptidase P, N-terminal domain M3Q_1462 PF01494 FAD binding domain M3Q_1463 PF01494 FAD binding domain M3Q_1465 PF13411 MerR HTH family regulatory protein M3Q_1467 PF01810 LysE type translocator M3Q_1468 PF03466 LysR substrate binding domain M3Q_1468 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_147 PF17391 Urocanase N-terminal domain M3Q_147 PF17392 Urocanase C-terminal domain M3Q_147 PF01175 Urocanase Rossmann-like domain M3Q_1470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M3Q_1471 PF02021 Uncharacterised protein family UPF0102 M3Q_1472 PF04972 BON domain M3Q_1474 PF00293 NUDIX domain M3Q_1474 PF09297 NADH pyrophosphatase zinc ribbon domain M3Q_1476 PF00929 Exonuclease M3Q_1477 PF01464 Transglycosylase SLT domain M3Q_1477 PF01476 LysM domain M3Q_1477 PF01464 Transglycosylase SLT domain M3Q_1477 PF01476 LysM domain M3Q_1478 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3Q_1479 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_148 PF05962 HutD M3Q_1480 PF12911 N-terminal TM domain of oligopeptide transport permease C M3Q_1480 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1481 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3Q_1481 PF00005 ABC transporter M3Q_1482 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1482 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_1483 PF07715 TonB-dependent Receptor Plug Domain M3Q_1483 PF00593 TonB dependent receptor M3Q_1484 PF00929 Exonuclease M3Q_1485 PF01979 Amidohydrolase family M3Q_1486 PF00360 Phytochrome region M3Q_1486 PF00990 Diguanylate cyclase, GGDEF domain M3Q_1486 PF01590 GAF domain M3Q_1486 PF00563 EAL domain M3Q_1487 PF00764 Arginosuccinate synthase M3Q_1488 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1488 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_149 PF07702 UTRA domain M3Q_149 PF00392 Bacterial regulatory proteins, gntR family M3Q_1490 PF05987 Bacterial protein of unknown function (DUF898) M3Q_1491 PF03180 NLPA lipoprotein M3Q_1494 PF04717 Type VI secretion system, phage-baseplate injector M3Q_1494 PF16671 Actin cross-linking domain M3Q_1495 PF03527 RHS protein M3Q_1495 PF05593 RHS Repeat M3Q_15 PF00155 Aminotransferase class I and II M3Q_15 PF00392 Bacterial regulatory proteins, gntR family M3Q_1503 PF00324 Amino acid permease M3Q_1504 PF01266 FAD dependent oxidoreductase M3Q_1505 PF00324 Amino acid permease M3Q_1507 PF07729 FCD domain M3Q_1507 PF00392 Bacterial regulatory proteins, gntR family M3Q_1509 PF00171 Aldehyde dehydrogenase family M3Q_151 PF07683 Cobalamin synthesis protein cobW C-terminal domain M3Q_151 PF02492 CobW/HypB/UreG, nucleotide-binding domain M3Q_1511 PF00202 Aminotransferase class-III M3Q_1512 PF04958 Arginine N-succinyltransferase beta subunit M3Q_1513 PF00324 Amino acid permease M3Q_1514 PF13610 DDE domain M3Q_1515 PF01526 Tn3 transposase DDE domain M3Q_1515 PF13700 Domain of unknown function (DUF4158) M3Q_1516 PF02796 Helix-turn-helix domain of resolvase M3Q_1516 PF00239 Resolvase, N terminal domain M3Q_1517 PF13610 DDE domain M3Q_1519 PF02678 Pirin M3Q_1519 PF17954 Quercetinase C-terminal cupin domain M3Q_1521 PF00106 short chain dehydrogenase M3Q_1522 PF00743 Flavin-binding monooxygenase-like M3Q_1524 PF00860 Permease family M3Q_1525 PF00962 Adenosine/AMP deaminase M3Q_1526 PF01292 Prokaryotic cytochrome b561 M3Q_1528 PF01351 Ribonuclease HII M3Q_1529 PF02599 Global regulator protein family M3Q_153 PF00324 Amino acid permease M3Q_1530 PF13840 ACT domain M3Q_1530 PF01842 ACT domain M3Q_1530 PF00696 Amino acid kinase family M3Q_1531 PF02272 DHHA1 domain M3Q_1531 PF01411 tRNA synthetases class II (A) M3Q_1531 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3Q_1532 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M3Q_1532 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3Q_1533 PF13393 Histidyl-tRNA synthetase M3Q_1534 PF00709 Adenylosuccinate synthetase M3Q_1537 PF00248 Aldo/keto reductase family M3Q_1540 PF00027 Cyclic nucleotide-binding domain M3Q_1540 PF13545 Crp-like helix-turn-helix domain M3Q_1541 PF02566 OsmC-like protein M3Q_1544 PF02861 Clp amino terminal domain, pathogenicity island component M3Q_1544 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_1544 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_1544 PF17871 AAA lid domain M3Q_1544 PF07724 AAA domain (Cdc48 subfamily) M3Q_1547 PF10672 S-adenosylmethionine-dependent methyltransferase M3Q_1547 PF02926 THUMP domain M3Q_1547 PF01170 Putative RNA methylase family UPF0020 M3Q_1549 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3Q_1549 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3Q_155 PF14497 Glutathione S-transferase, C-terminal domain M3Q_155 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1550 PF01979 Amidohydrolase family M3Q_1551 PF13488 Glycine zipper M3Q_1551 PF00691 OmpA family M3Q_1553 PF00043 Glutathione S-transferase, C-terminal domain M3Q_1553 PF13417 Glutathione S-transferase, N-terminal domain M3Q_1554 PF02390 Putative methyltransferase M3Q_1556 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1556 PF00043 Glutathione S-transferase, C-terminal domain M3Q_1558 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1558 PF13192 Thioredoxin domain M3Q_156 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_1562 PF10417 C-terminal domain of 1-Cys peroxiredoxin M3Q_1562 PF00578 AhpC/TSA family M3Q_1563 PF04408 Helicase associated domain (HA2) M3Q_1563 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M3Q_1563 PF00270 DEAD/DEAH box helicase M3Q_1563 PF11898 Domain of unknown function (DUF3418) M3Q_1563 PF00271 Helicase conserved C-terminal domain M3Q_1564 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M3Q_1564 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M3Q_1566 PF07690 Major Facilitator Superfamily M3Q_1567 PF03594 Benzoate membrane transport protein M3Q_1568 PF00106 short chain dehydrogenase M3Q_1569 PF00970 Oxidoreductase FAD-binding domain M3Q_1569 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_1569 PF00175 Oxidoreductase NAD-binding domain M3Q_1570 PF00866 Ring hydroxylating beta subunit M3Q_1571 PF00355 Rieske [2Fe-2S] domain M3Q_1571 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_1572 PF03466 LysR substrate binding domain M3Q_1572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1574 PF00403 Heavy-metal-associated domain M3Q_1575 PF00376 MerR family regulatory protein M3Q_1575 PF09278 MerR, DNA binding M3Q_158 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_1582 PF13742 OB-fold nucleic acid binding domain M3Q_1582 PF02601 Exonuclease VII, large subunit M3Q_1588 PF01810 LysE type translocator M3Q_1589 PF00313 'Cold-shock' DNA-binding domain M3Q_159 PF04463 Protein of unknown function (DUF523) M3Q_1591 PF03807 NADP oxidoreductase coenzyme F420-dependent M3Q_1591 PF14748 Pyrroline-5-carboxylate reductase dimerisation M3Q_1596 PF07690 Major Facilitator Superfamily M3Q_1597 PF01638 HxlR-like helix-turn-helix M3Q_16 PF00324 Amino acid permease M3Q_160 PF01554 MatE M3Q_1602 PF09190 DALR domain M3Q_1602 PF01406 tRNA synthetases class I (C) catalytic domain M3Q_1603 PF00571 CBS domain M3Q_1603 PF01380 SIS domain M3Q_1606 PF03968 OstA-like protein M3Q_1607 PF12399 Branched-chain amino acid ATP-binding cassette transporter M3Q_1607 PF00005 ABC transporter M3Q_1608 PF02321 Outer membrane efflux protein M3Q_1609 PF00664 ABC transporter transmembrane region M3Q_1609 PF00005 ABC transporter M3Q_1609 PF03412 Peptidase C39 family M3Q_161 PF01758 Sodium Bile acid symporter family M3Q_1611 PF01205 Uncharacterized protein family UPF0029 M3Q_1612 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_1614 PF01596 O-methyltransferase M3Q_1616 PF11953 Domain of unknown function (DUF3470) M3Q_1616 PF00037 4Fe-4S binding domain M3Q_1618 PF00488 MutS domain V M3Q_1618 PF05190 MutS family domain IV M3Q_1618 PF05192 MutS domain III M3Q_1618 PF05188 MutS domain II M3Q_1618 PF01624 MutS domain I M3Q_1619 PF01037 Lrp/AsnC ligand binding domain M3Q_162 PF00857 Isochorismatase family M3Q_1620 PF00892 EamA-like transporter family M3Q_1621 PF00563 EAL domain M3Q_1621 PF00990 Diguanylate cyclase, GGDEF domain M3Q_1621 PF03707 Bacterial signalling protein N terminal repeat M3Q_1622 PF03279 Bacterial lipid A biosynthesis acyltransferase M3Q_1624 PF07690 Major Facilitator Superfamily M3Q_1628 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_1628 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_163 PF00701 Dihydrodipicolinate synthetase family M3Q_1631 PF13419 Haloacid dehalogenase-like hydrolase M3Q_1633 PF16671 Actin cross-linking domain M3Q_1633 PF04717 Type VI secretion system, phage-baseplate injector M3Q_1634 PF14220 Domain of unknown function (DUF4329) M3Q_1634 PF05593 RHS Repeat M3Q_1634 PF03527 RHS protein M3Q_1638 PF01566 Natural resistance-associated macrophage protein M3Q_1639 PF03746 LamB/YcsF family M3Q_1640 PF07286 Protein of unknown function (DUF1445) M3Q_1642 PF00289 Biotin carboxylase, N-terminal domain M3Q_1642 PF00364 Biotin-requiring enzyme M3Q_1642 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_1642 PF02785 Biotin carboxylase C-terminal domain M3Q_1643 PF00654 Voltage gated chloride channel M3Q_1648 PF00440 Bacterial regulatory proteins, tetR family M3Q_165 PF01259 SAICAR synthetase M3Q_1650 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_1650 PF13823 Alcohol dehydrogenase GroES-associated M3Q_1650 PF00107 Zinc-binding dehydrogenase M3Q_1653 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_1653 PF00289 Biotin carboxylase, N-terminal domain M3Q_1653 PF02785 Biotin carboxylase C-terminal domain M3Q_1654 PF02525 Flavodoxin-like fold M3Q_1655 PF01638 HxlR-like helix-turn-helix M3Q_1658 PF01402 Ribbon-helix-helix protein, copG family M3Q_1658 PF08753 NikR C terminal nickel binding domain M3Q_1659 PF01425 Amidase M3Q_1660 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_1661 PF00005 ABC transporter M3Q_167 PF01226 Formate/nitrite transporter M3Q_1674 PF01389 OmpA-like transmembrane domain M3Q_1674 PF00691 OmpA family M3Q_1676 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_1676 PF07724 AAA domain (Cdc48 subfamily) M3Q_1676 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_1676 PF17871 AAA lid domain M3Q_168 PF16193 AAA C-terminal domain M3Q_168 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_168 PF12002 MgsA AAA+ ATPase C terminal M3Q_1682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1682 PF03466 LysR substrate binding domain M3Q_1685 PF07690 Major Facilitator Superfamily M3Q_1688 PF02677 Epoxyqueuosine reductase QueH M3Q_169 PF07995 Glucose / Sorbosone dehydrogenase M3Q_1692 PF00083 Sugar (and other) transporter M3Q_1693 PF00171 Aldehyde dehydrogenase family M3Q_1694 PF13520 Amino acid permease M3Q_1695 PF03315 Serine dehydratase beta chain M3Q_1695 PF03313 Serine dehydratase alpha chain M3Q_1696 PF01575 MaoC like domain M3Q_1696 PF00171 Aldehyde dehydrogenase family M3Q_1697 PF05138 Phenylacetic acid catabolic protein M3Q_1698 PF06243 Phenylacetic acid degradation B M3Q_1699 PF05138 Phenylacetic acid catabolic protein M3Q_170 PF03692 Putative zinc- or iron-chelating domain M3Q_1700 PF01883 Iron-sulfur cluster assembly protein M3Q_1701 PF00175 Oxidoreductase NAD-binding domain M3Q_1701 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_1701 PF00970 Oxidoreductase FAD-binding domain M3Q_1702 PF00378 Enoyl-CoA hydratase/isomerase M3Q_1703 PF00378 Enoyl-CoA hydratase/isomerase M3Q_1704 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_1704 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M3Q_1704 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_1705 PF00108 Thiolase, N-terminal domain M3Q_1705 PF02803 Thiolase, C-terminal domain M3Q_1706 PF14535 AMP-binding enzyme C-terminal domain M3Q_1706 PF00501 AMP-binding enzyme M3Q_1707 PF08223 PaaX-like protein C-terminal domain M3Q_1707 PF07848 PaaX-like protein M3Q_1708 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_1709 PF03061 Thioesterase superfamily M3Q_171 PF07043 Protein of unknown function (DUF1328) M3Q_1716 PF00199 Catalase M3Q_1717 PF01292 Prokaryotic cytochrome b561 M3Q_1721 PF12697 Alpha/beta hydrolase family M3Q_1722 PF01613 Flavin reductase like domain M3Q_1723 PF00296 Luciferase-like monooxygenase M3Q_1724 PF00171 Aldehyde dehydrogenase family M3Q_1725 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M3Q_1727 PF00171 Aldehyde dehydrogenase family M3Q_1728 PF02627 Carboxymuconolactone decarboxylase family M3Q_1729 PF03466 LysR substrate binding domain M3Q_1729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1730 PF02525 Flavodoxin-like fold M3Q_1731 PF01614 Bacterial transcriptional regulator M3Q_1731 PF09339 IclR helix-turn-helix domain M3Q_1732 PF01494 FAD binding domain M3Q_1733 PF00392 Bacterial regulatory proteins, gntR family M3Q_1733 PF07702 UTRA domain M3Q_1735 PF00005 ABC transporter M3Q_1735 PF08402 TOBE domain M3Q_1736 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1737 PF01266 FAD dependent oxidoreductase M3Q_1738 PF00266 Aminotransferase class-V M3Q_1739 PF13419 Haloacid dehalogenase-like hydrolase M3Q_174 PF14815 NUDIX domain M3Q_174 PF10576 Iron-sulfur binding domain of endonuclease III M3Q_174 PF00633 Helix-hairpin-helix motif M3Q_174 PF00730 HhH-GPD superfamily base excision DNA repair protein M3Q_1740 PF07690 Major Facilitator Superfamily M3Q_1741 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1741 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1741 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1742 PF02515 CoA-transferase family III M3Q_1743 PF09339 IclR helix-turn-helix domain M3Q_1744 PF00378 Enoyl-CoA hydratase/isomerase M3Q_1745 PF03060 Nitronate monooxygenase M3Q_1746 PF07690 Major Facilitator Superfamily M3Q_1747 PF09339 IclR helix-turn-helix domain M3Q_1748 PF02803 Thiolase, C-terminal domain M3Q_1748 PF00108 Thiolase, N-terminal domain M3Q_1749 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_1749 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_1749 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M3Q_1751 PF00378 Enoyl-CoA hydratase/isomerase M3Q_1752 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1752 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1752 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1753 PF07690 Major Facilitator Superfamily M3Q_1754 PF01144 Coenzyme A transferase M3Q_1755 PF01144 Coenzyme A transferase M3Q_1757 PF07690 Major Facilitator Superfamily M3Q_1759 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1759 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1759 PF12806 Acetyl-CoA dehydrogenase C-terminal like M3Q_1759 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1762 PF03466 LysR substrate binding domain M3Q_1762 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1763 PF00682 HMGL-like M3Q_1764 PF02785 Biotin carboxylase C-terminal domain M3Q_1764 PF00289 Biotin carboxylase, N-terminal domain M3Q_1764 PF00364 Biotin-requiring enzyme M3Q_1764 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_1765 PF00378 Enoyl-CoA hydratase/isomerase M3Q_1766 PF01039 Carboxyl transferase domain M3Q_1767 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1767 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1767 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1768 PF00440 Bacterial regulatory proteins, tetR family M3Q_1769 PF00501 AMP-binding enzyme M3Q_1769 PF13193 AMP-binding enzyme C-terminal domain M3Q_177 PF03352 Methyladenine glycosylase M3Q_1773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1773 PF03466 LysR substrate binding domain M3Q_178 PF00107 Zinc-binding dehydrogenase M3Q_178 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_1781 PF00994 Probable molybdopterin binding domain M3Q_1781 PF02464 Competence-damaged protein M3Q_1781 PF18146 Damage-inducible protein CinA KH domain M3Q_1783 PF18011 C-terminal domain found in long catalases M3Q_1783 PF06628 Catalase-related immune-responsive M3Q_1783 PF00199 Catalase M3Q_1787 PF00717 Peptidase S24-like M3Q_1789 PF01037 Lrp/AsnC ligand binding domain M3Q_1789 PF13404 AsnC-type helix-turn-helix domain M3Q_179 PF00392 Bacterial regulatory proteins, gntR family M3Q_179 PF00155 Aminotransferase class I and II M3Q_1791 PF00072 Response regulator receiver domain M3Q_1791 PF09308 LuxQ, periplasmic M3Q_1791 PF00512 His Kinase A (phospho-acceptor) domain M3Q_1791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_1792 PF00072 Response regulator receiver domain M3Q_1794 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1795 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1796 PF00005 ABC transporter M3Q_1797 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_1798 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_1799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1799 PF03466 LysR substrate binding domain M3Q_18 PF03591 AzlC protein M3Q_1800 PF01810 LysE type translocator M3Q_1801 PF00266 Aminotransferase class-V M3Q_1803 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_1804 PF00581 Rhodanese-like domain M3Q_1806 PF03466 LysR substrate binding domain M3Q_1806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1807 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1808 PF14834 Glutathione S-transferase, C-terminal domain M3Q_1808 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1809 PF03466 LysR substrate binding domain M3Q_1809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_181 PF03466 LysR substrate binding domain M3Q_181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1810 PF03788 LrgA family M3Q_1811 PF04172 LrgB-like family M3Q_1812 PF00155 Aminotransferase class I and II M3Q_1812 PF00392 Bacterial regulatory proteins, gntR family M3Q_1815 PF07690 Major Facilitator Superfamily M3Q_1816 PF16957 Malonate decarboxylase, alpha subunit, transporter M3Q_1817 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M3Q_1818 PF06857 Malonate decarboxylase delta subunit (MdcD) M3Q_1819 PF01039 Carboxyl transferase domain M3Q_182 PF00248 Aldo/keto reductase family M3Q_1821 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M3Q_1822 PF00698 Acyl transferase domain M3Q_1825 PF03466 LysR substrate binding domain M3Q_1825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1826 PF00155 Aminotransferase class I and II M3Q_1826 PF00392 Bacterial regulatory proteins, gntR family M3Q_1828 PF02322 Cytochrome bd terminal oxidase subunit II M3Q_1829 PF01654 Cytochrome bd terminal oxidase subunit I M3Q_183 PF07690 Major Facilitator Superfamily M3Q_1831 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1831 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1831 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1832 PF00296 Luciferase-like monooxygenase M3Q_1833 PF00083 Sugar (and other) transporter M3Q_1836 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M3Q_1837 PF00005 ABC transporter M3Q_1838 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1839 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M3Q_1840 PF01177 Asp/Glu/Hydantoin racemase M3Q_1841 PF07690 Major Facilitator Superfamily M3Q_1842 PF00501 AMP-binding enzyme M3Q_1843 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1843 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1843 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1844 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_1844 PF16197 Ketoacyl-synthetase C-terminal extension M3Q_1844 PF08242 Methyltransferase domain M3Q_1844 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_1844 PF14765 Polyketide synthase dehydratase M3Q_1844 PF00975 Thioesterase domain M3Q_1844 PF00550 Phosphopantetheine attachment site M3Q_1845 PF07993 Male sterility protein M3Q_1845 PF00501 AMP-binding enzyme M3Q_1845 PF13193 AMP-binding enzyme C-terminal domain M3Q_1845 PF00668 Condensation domain M3Q_1845 PF00550 Phosphopantetheine attachment site M3Q_1846 PF00668 Condensation domain M3Q_1846 PF00975 Thioesterase domain M3Q_1846 PF00550 Phosphopantetheine attachment site M3Q_1846 PF13193 AMP-binding enzyme C-terminal domain M3Q_1846 PF00501 AMP-binding enzyme M3Q_1849 PF12697 Alpha/beta hydrolase family M3Q_185 PF05173 Dihydrodipicolinate reductase, C-terminus M3Q_185 PF01113 Dihydrodipicolinate reductase, N-terminus M3Q_1850 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_1851 PF01722 BolA-like protein M3Q_1852 PF01336 OB-fold nucleic acid binding domain M3Q_1852 PF07733 Bacterial DNA polymerase III alpha NTPase domain M3Q_1852 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M3Q_1852 PF14579 Helix-hairpin-helix motif M3Q_1852 PF02811 PHP domain M3Q_1853 PF17763 Glutaminase/Asparaginase C-terminal domain M3Q_1853 PF00710 Asparaginase, N-terminal M3Q_1854 PF00375 Sodium:dicarboxylate symporter family M3Q_1855 PF00155 Aminotransferase class I and II M3Q_1856 PF01641 SelR domain M3Q_1857 PF00255 Glutathione peroxidase M3Q_1858 PF12833 Helix-turn-helix domain M3Q_1858 PF12852 Cupin M3Q_1860 PF00155 Aminotransferase class I and II M3Q_1861 PF08335 GlnD PII-uridylyltransferase M3Q_1861 PF01966 HD domain M3Q_1861 PF01909 Nucleotidyltransferase domain M3Q_1862 PF02222 ATP-grasp domain M3Q_1864 PF05437 Branched-chain amino acid transport protein (AzlD) M3Q_1865 PF03591 AzlC protein M3Q_187 PF00684 DnaJ central domain M3Q_187 PF01556 DnaJ C terminal domain M3Q_187 PF00226 DnaJ domain M3Q_1870 PF01926 50S ribosome-binding GTPase M3Q_1870 PF06071 Protein of unknown function (DUF933) M3Q_1871 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1872 PF00005 ABC transporter M3Q_1872 PF09383 NIL domain M3Q_1873 PF03180 NLPA lipoprotein M3Q_1876 PF03180 NLPA lipoprotein M3Q_1877 PF00296 Luciferase-like monooxygenase M3Q_1879 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1879 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1882 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1883 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1884 PF00005 ABC transporter M3Q_1886 PF01037 Lrp/AsnC ligand binding domain M3Q_1887 PF01709 Transcriptional regulator M3Q_1889 PF00440 Bacterial regulatory proteins, tetR family M3Q_189 PF00873 AcrB/AcrD/AcrF family M3Q_1893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1893 PF03466 LysR substrate binding domain M3Q_1895 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M3Q_1897 PF00892 EamA-like transporter family M3Q_190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_1901 PF00577 Outer membrane usher protein M3Q_1901 PF13954 PapC N-terminal domain M3Q_1901 PF13953 PapC C-terminal domain M3Q_1902 PF02753 Pili assembly chaperone PapD, C-terminal domain M3Q_1902 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M3Q_1903 PF16970 Type-1 fimbrial protein, A M3Q_1906 PF06968 Biotin and Thiamin Synthesis associated domain M3Q_1906 PF04055 Radical SAM superfamily M3Q_1907 PF08331 Domain of unknown function (DUF1730) M3Q_1908 PF01256 Carbohydrate kinase M3Q_1908 PF03853 YjeF-related protein N-terminus M3Q_1909 PF02075 Crossover junction endodeoxyribonuclease RuvC M3Q_1912 PF00905 Penicillin binding protein transpeptidase domain M3Q_1916 PF02772 S-adenosylmethionine synthetase, central domain M3Q_1916 PF02773 S-adenosylmethionine synthetase, C-terminal domain M3Q_1916 PF00438 S-adenosylmethionine synthetase, N-terminal domain M3Q_1917 PF00456 Transketolase, thiamine diphosphate binding domain M3Q_1917 PF02780 Transketolase, C-terminal domain M3Q_1917 PF02779 Transketolase, pyrimidine binding domain M3Q_1919 PF04264 YceI-like domain M3Q_192 PF00311 Phosphoenolpyruvate carboxylase M3Q_1921 PF09992 Phosphodiester glycosidase M3Q_1923 PF05958 tRNA (Uracil-5-)-methyltransferase M3Q_1924 PF04229 GrpB protein M3Q_1925 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M3Q_1925 PF14850 DNA-binding domain of Proline dehydrogenase M3Q_1925 PF00171 Aldehyde dehydrogenase family M3Q_1925 PF01619 Proline dehydrogenase M3Q_1926 PF01037 Lrp/AsnC ligand binding domain M3Q_1927 PF00474 Sodium:solute symporter family M3Q_1928 PF02146 Sir2 family M3Q_1929 PF01597 Glycine cleavage H-protein M3Q_193 PF00860 Permease family M3Q_1930 PF12833 Helix-turn-helix domain M3Q_1930 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M3Q_1932 PF00664 ABC transporter transmembrane region M3Q_1932 PF00005 ABC transporter M3Q_1934 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M3Q_1935 PF06912 Protein of unknown function (DUF1275) M3Q_1936 PF00375 Sodium:dicarboxylate symporter family M3Q_1939 PF08007 Cupin superfamily protein M3Q_194 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_194 PF03466 LysR substrate binding domain M3Q_1940 PF02545 Maf-like protein M3Q_1942 PF00162 Phosphoglycerate kinase M3Q_1944 PF01116 Fructose-bisphosphate aldolase class-II M3Q_1945 PF00639 PPIC-type PPIASE domain M3Q_1945 PF09312 SurA N-terminal domain M3Q_1946 PF03968 OstA-like protein M3Q_1946 PF04453 LPS transport system D M3Q_1947 PF01636 Phosphotransferase enzyme family M3Q_1948 PF00483 Nucleotidyl transferase M3Q_1949 PF02527 rRNA small subunit methyltransferase G M3Q_1950 PF13614 AAA domain M3Q_1951 PF02195 ParB-like nuclease domain M3Q_1951 PF17762 HTH domain found in ParB protein M3Q_1952 PF01618 MotA/TolQ/ExbB proton channel family M3Q_1954 PF00005 ABC transporter M3Q_1954 PF00664 ABC transporter transmembrane region M3Q_1955 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M3Q_1956 PF02348 Cytidylyltransferase M3Q_1957 PF09115 DNA polymerase III, delta subunit, C terminal M3Q_1959 PF01026 TatD related DNase M3Q_1962 PF07963 Prokaryotic N-terminal methylation motif M3Q_1962 PF02501 Type II secretion system (T2SS), protein I M3Q_1963 PF11612 Type II secretion system (T2SS), protein J M3Q_1963 PF07963 Prokaryotic N-terminal methylation motif M3Q_1964 PF03934 Type II secretion system (T2SS), protein K M3Q_1966 PF03167 Uracil DNA glycosylase superfamily M3Q_1968 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M3Q_197 PF00920 Dehydratase family M3Q_1970 PF02224 Cytidylate kinase M3Q_1971 PF00575 S1 RNA binding domain M3Q_1972 PF00216 Bacterial DNA-binding protein M3Q_1974 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M3Q_1976 PF00743 Flavin-binding monooxygenase-like M3Q_1978 PF03969 AFG1-like ATPase M3Q_1979 PF01274 Malate synthase M3Q_198 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3Q_1981 PF02472 Biopolymer transport protein ExbD/TolR M3Q_1982 PF02472 Biopolymer transport protein ExbD/TolR M3Q_1983 PF01618 MotA/TolQ/ExbB proton channel family M3Q_1985 PF00593 TonB dependent receptor M3Q_1985 PF07715 TonB-dependent Receptor Plug Domain M3Q_1989 PF01432 Peptidase family M3 M3Q_199 PF07859 alpha/beta hydrolase fold M3Q_1990 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1991 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1992 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3Q_1992 PF00005 ABC transporter M3Q_1995 PF00459 Inositol monophosphatase family M3Q_1997 PF01649 Ribosomal protein S20 M3Q_1998 PF13460 NAD(P)H-binding M3Q_1999 PF03737 Aldolase/RraA M3Q_20 PF00436 Single-strand binding protein family M3Q_2003 PF00270 DEAD/DEAH box helicase M3Q_2003 PF02559 CarD-like/TRCF domain M3Q_2003 PF17757 UvrB interaction domain M3Q_2003 PF03461 TRCF domain M3Q_2003 PF00271 Helicase conserved C-terminal domain M3Q_2005 PF00211 Adenylate and Guanylate cyclase catalytic domain M3Q_2006 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2007 PF00012 Hsp70 protein M3Q_2008 PF00226 DnaJ domain M3Q_2008 PF07743 HSCB C-terminal oligomerisation domain M3Q_2009 PF01521 Iron-sulphur cluster biosynthesis M3Q_2010 PF01592 NifU-like N terminal domain M3Q_2011 PF00266 Aminotransferase class-V M3Q_2012 PF02082 Transcriptional regulator M3Q_2015 PF00216 Bacterial DNA-binding protein M3Q_2016 PF00639 PPIC-type PPIASE domain M3Q_2016 PF09312 SurA N-terminal domain M3Q_2017 PF12833 Helix-turn-helix domain M3Q_2017 PF12852 Cupin M3Q_2018 PF00487 Fatty acid desaturase M3Q_2019 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2019 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2019 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2020 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2021 PF03109 ABC1 family M3Q_2023 PF04073 Aminoacyl-tRNA editing domain M3Q_2024 PF06276 Ferric iron reductase FhuF-like transporter M3Q_2024 PF04183 IucA / IucC family M3Q_2025 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M3Q_2026 PF07690 Major Facilitator Superfamily M3Q_2027 PF04183 IucA / IucC family M3Q_2027 PF06276 Ferric iron reductase FhuF-like transporter M3Q_2028 PF06276 Ferric iron reductase FhuF-like transporter M3Q_2028 PF04183 IucA / IucC family M3Q_203 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_203 PF03466 LysR substrate binding domain M3Q_2031 PF00593 TonB dependent receptor M3Q_2031 PF07715 TonB-dependent Receptor Plug Domain M3Q_2038 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M3Q_2039 PF02277 Phosphoribosyltransferase M3Q_204 PF01025 GrpE M3Q_2042 PF02654 Cobalamin-5-phosphate synthase M3Q_2043 PF00793 DAHP synthetase I family M3Q_2044 PF01925 Sulfite exporter TauE/SafE M3Q_2048 PF00593 TonB dependent receptor M3Q_2048 PF07715 TonB-dependent Receptor Plug Domain M3Q_2049 PF02684 Lipid-A-disaccharide synthetase M3Q_205 PF00012 Hsp70 protein M3Q_2051 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_2052 PF00005 ABC transporter M3Q_2059 PF01230 HIT domain M3Q_2065 PF08241 Methyltransferase domain M3Q_2066 PF00561 alpha/beta hydrolase fold M3Q_2067 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_2069 PF02575 YbaB/EbfC DNA-binding family M3Q_2070 PF13662 Toprim domain M3Q_2070 PF02132 RecR protein M3Q_2071 PF01612 3'-5' exonuclease M3Q_2071 PF00570 HRDC domain M3Q_2075 PF05166 YcgL domain M3Q_2077 PF01434 Peptidase family M41 M3Q_2077 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_2077 PF17862 AAA+ lid domain M3Q_2079 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_2080 PF05175 Methyltransferase small domain M3Q_2081 PF01264 Chorismate synthase M3Q_2082 PF08448 PAS fold M3Q_2082 PF00990 Diguanylate cyclase, GGDEF domain M3Q_2085 PF04055 Radical SAM superfamily M3Q_2086 PF00676 Dehydrogenase E1 component M3Q_2087 PF02779 Transketolase, pyrimidine binding domain M3Q_2087 PF02780 Transketolase, C-terminal domain M3Q_2088 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_2088 PF02817 e3 binding domain M3Q_2088 PF00364 Biotin-requiring enzyme M3Q_2089 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_2089 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_209 PF13406 Transglycosylase SLT domain M3Q_2090 PF00106 short chain dehydrogenase M3Q_2091 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2091 PF00107 Zinc-binding dehydrogenase M3Q_2092 PF01062 Bestrophin, RFP-TM, chloride channel M3Q_2093 PF02954 Bacterial regulatory protein, Fis family M3Q_2093 PF00072 Response regulator receiver domain M3Q_2093 PF00158 Sigma-54 interaction domain M3Q_2094 PF00753 Metallo-beta-lactamase superfamily M3Q_2094 PF04273 Putative phosphatase (DUF442) M3Q_2095 PF04273 Putative phosphatase (DUF442) M3Q_2095 PF00753 Metallo-beta-lactamase superfamily M3Q_2096 PF01925 Sulfite exporter TauE/SafE M3Q_2099 PF06445 GyrI-like small molecule binding domain M3Q_2099 PF12833 Helix-turn-helix domain M3Q_21 PF07690 Major Facilitator Superfamily M3Q_210 PF02222 ATP-grasp domain M3Q_210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M3Q_2100 PF01638 HxlR-like helix-turn-helix M3Q_2101 PF02525 Flavodoxin-like fold M3Q_2106 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M3Q_2107 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2108 PF00005 ABC transporter M3Q_211 PF00731 AIR carboxylase M3Q_2111 PF00083 Sugar (and other) transporter M3Q_2112 PF07715 TonB-dependent Receptor Plug Domain M3Q_2112 PF00593 TonB dependent receptor M3Q_2113 PF00206 Lyase M3Q_2113 PF10415 Fumarase C C-terminus M3Q_2116 PF03466 LysR substrate binding domain M3Q_2116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2117 PF03466 LysR substrate binding domain M3Q_2118 PF02803 Thiolase, C-terminal domain M3Q_2118 PF00108 Thiolase, N-terminal domain M3Q_2119 PF02667 Short chain fatty acid transporter M3Q_2120 PF01144 Coenzyme A transferase M3Q_2121 PF01144 Coenzyme A transferase M3Q_2122 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2122 PF03466 LysR substrate binding domain M3Q_2128 PF12833 Helix-turn-helix domain M3Q_2128 PF06719 AraC-type transcriptional regulator N-terminus M3Q_2129 PF07690 Major Facilitator Superfamily M3Q_213 PF08245 Mur ligase middle domain M3Q_213 PF02875 Mur ligase family, glutamate ligase domain M3Q_213 PF01225 Mur ligase family, catalytic domain M3Q_2130 PF01738 Dienelactone hydrolase family M3Q_2133 PF01613 Flavin reductase like domain M3Q_2135 PF12833 Helix-turn-helix domain M3Q_2135 PF14525 AraC-binding-like domain M3Q_2136 PF00175 Oxidoreductase NAD-binding domain M3Q_2136 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2136 PF00970 Oxidoreductase FAD-binding domain M3Q_2137 PF00866 Ring hydroxylating beta subunit M3Q_2138 PF00355 Rieske [2Fe-2S] domain M3Q_2138 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_2139 PF03459 TOBE domain M3Q_2139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2141 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2142 PF03459 TOBE domain M3Q_2142 PF00005 ABC transporter M3Q_2143 PF00106 short chain dehydrogenase M3Q_2144 PF00550 Phosphopantetheine attachment site M3Q_2144 PF00857 Isochorismatase family M3Q_2146 PF00149 Calcineurin-like phosphoesterase M3Q_2147 PF02503 Polyphosphate kinase middle domain M3Q_2147 PF13090 Polyphosphate kinase C-terminal domain 2 M3Q_2147 PF13089 Polyphosphate kinase N-terminal domain M3Q_2147 PF17941 Polyphosphate kinase C-terminal domain 1 M3Q_2148 PF12706 Beta-lactamase superfamily domain M3Q_2149 PF03070 TENA/THI-4/PQQC family M3Q_215 PF01569 PAP2 superfamily M3Q_2150 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M3Q_2151 PF13186 Iron-sulfur cluster-binding domain M3Q_2151 PF04055 Radical SAM superfamily M3Q_2152 PF01244 Membrane dipeptidase (Peptidase family M19) M3Q_2156 PF13091 PLD-like domain M3Q_2159 PF00199 Catalase M3Q_216 PF03741 Integral membrane protein TerC family M3Q_2161 PF00107 Zinc-binding dehydrogenase M3Q_2161 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2163 PF00419 Fimbrial protein M3Q_2164 PF13954 PapC N-terminal domain M3Q_2164 PF13953 PapC C-terminal domain M3Q_2164 PF00577 Outer membrane usher protein M3Q_2165 PF02753 Pili assembly chaperone PapD, C-terminal domain M3Q_2165 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M3Q_2168 PF16970 Type-1 fimbrial protein, A M3Q_2172 PF01266 FAD dependent oxidoreductase M3Q_2175 PF01593 Flavin containing amine oxidoreductase M3Q_2176 PF00743 Flavin-binding monooxygenase-like M3Q_2177 PF12146 Serine aminopeptidase, S33 M3Q_2178 PF02321 Outer membrane efflux protein M3Q_2179 PF00873 AcrB/AcrD/AcrF family M3Q_218 PF03738 Glutathionylspermidine synthase preATP-grasp M3Q_2180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_2180 PF00529 HlyD membrane-fusion protein of T1SS M3Q_2181 PF00072 Response regulator receiver domain M3Q_2181 PF00486 Transcriptional regulatory protein, C terminal M3Q_2182 PF00672 HAMP domain M3Q_2182 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2182 PF16527 Two-component sensor protein CpxA, periplasmic domain M3Q_2184 PF02311 AraC-like ligand binding domain M3Q_2184 PF12833 Helix-turn-helix domain M3Q_2185 PF12146 Serine aminopeptidase, S33 M3Q_219 PF00285 Citrate synthase, C-terminal domain M3Q_2196 PF02824 TGS domain M3Q_2196 PF04607 Region found in RelA / SpoT proteins M3Q_2196 PF13291 ACT domain M3Q_2198 PF01975 Survival protein SurE M3Q_220 PF02767 DNA polymerase III beta subunit, central domain M3Q_220 PF02768 DNA polymerase III beta subunit, C-terminal domain M3Q_220 PF00712 DNA polymerase III beta subunit, N-terminal domain M3Q_2203 PF07690 Major Facilitator Superfamily M3Q_2204 PF13533 Biotin-lipoyl like M3Q_2205 PF01425 Amidase M3Q_2206 PF00196 Bacterial regulatory proteins, luxR family M3Q_221 PF00308 Bacterial dnaA protein M3Q_221 PF08299 Bacterial dnaA protein helix-turn-helix M3Q_221 PF11638 DnaA N-terminal domain M3Q_222 PF00468 Ribosomal protein L34 M3Q_2220 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M3Q_2221 PF14572 Phosphoribosyl synthetase-associated domain M3Q_2221 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M3Q_2225 PF00005 ABC transporter M3Q_2228 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2228 PF00107 Zinc-binding dehydrogenase M3Q_223 PF00825 Ribonuclease P M3Q_2231 PF06719 AraC-type transcriptional regulator N-terminus M3Q_2231 PF12833 Helix-turn-helix domain M3Q_2232 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M3Q_2232 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M3Q_2233 PF07690 Major Facilitator Superfamily M3Q_2234 PF01370 NAD dependent epimerase/dehydratase family M3Q_2235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2235 PF03466 LysR substrate binding domain M3Q_2237 PF00920 Dehydratase family M3Q_2238 PF00171 Aldehyde dehydrogenase family M3Q_224 PF01809 Putative membrane protein insertion efficiency factor M3Q_2241 PF00529 HlyD membrane-fusion protein of T1SS M3Q_2241 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_2245 PF03737 Aldolase/RraA M3Q_2246 PF01842 ACT domain M3Q_2246 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_2246 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_2247 PF07690 Major Facilitator Superfamily M3Q_225 PF14849 YidC periplasmic domain M3Q_225 PF02096 60Kd inner membrane protein M3Q_2251 PF03466 LysR substrate binding domain M3Q_2251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2253 PF08450 SMP-30/Gluconolactonase/LRE-like region M3Q_2256 PF04909 Amidohydrolase M3Q_2257 PF07690 Major Facilitator Superfamily M3Q_226 PF10396 GTP-binding protein TrmE N-terminus M3Q_226 PF12631 MnmE helical domain M3Q_226 PF01926 50S ribosome-binding GTPase M3Q_2260 PF04829 Pre-toxin domain with VENN motif M3Q_2260 PF05860 haemagglutination activity domain M3Q_2260 PF13332 Hemagglutinin repeat M3Q_2260 PF13018 Extended Signal Peptide of Type V secretion system M3Q_2261 PF17287 POTRA domain M3Q_2261 PF08479 POTRA domain, ShlB-type M3Q_2261 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M3Q_2263 PF01546 Peptidase family M20/M25/M40 M3Q_2263 PF07687 Peptidase dimerisation domain M3Q_2265 PF00999 Sodium/hydrogen exchanger family M3Q_2265 PF02254 TrkA-N domain M3Q_2266 PF07995 Glucose / Sorbosone dehydrogenase M3Q_2267 PF03466 LysR substrate binding domain M3Q_2267 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2268 PF00857 Isochorismatase family M3Q_227 PF02583 Metal-sensitive transcriptional repressor M3Q_2270 PF08359 YsiA-like protein, C-terminal region M3Q_2270 PF00440 Bacterial regulatory proteins, tetR family M3Q_2271 PF12706 Beta-lactamase superfamily domain M3Q_2273 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2275 PF09278 MerR, DNA binding M3Q_2275 PF00376 MerR family regulatory protein M3Q_2276 PF01872 RibD C-terminal domain M3Q_2277 PF00106 short chain dehydrogenase M3Q_2278 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_2278 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2279 PF01047 MarR family M3Q_228 PF16916 Dimerisation domain of Zinc Transporter M3Q_228 PF01545 Cation efflux family M3Q_2280 PF07859 alpha/beta hydrolase fold M3Q_2283 PF00199 Catalase M3Q_2283 PF06628 Catalase-related immune-responsive M3Q_2284 PF00561 alpha/beta hydrolase fold M3Q_2286 PF00171 Aldehyde dehydrogenase family M3Q_2287 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2287 PF00107 Zinc-binding dehydrogenase M3Q_2288 PF00474 Sodium:solute symporter family M3Q_2289 PF04341 Protein of unknown function, DUF485 M3Q_229 PF13098 Thioredoxin-like domain M3Q_229 PF10411 Disulfide bond isomerase protein N-terminus M3Q_2290 PF13193 AMP-binding enzyme C-terminal domain M3Q_2290 PF00501 AMP-binding enzyme M3Q_2291 PF00158 Sigma-54 interaction domain M3Q_2291 PF06506 Propionate catabolism activator M3Q_2291 PF02954 Bacterial regulatory protein, Fis family M3Q_2293 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2293 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2293 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2297 PF00171 Aldehyde dehydrogenase family M3Q_2299 PF07690 Major Facilitator Superfamily M3Q_23 PF08543 Phosphomethylpyrimidine kinase M3Q_23 PF03070 TENA/THI-4/PQQC family M3Q_23 PF02581 Thiamine monophosphate synthase M3Q_2300 PF00920 Dehydratase family M3Q_2301 PF07729 FCD domain M3Q_2301 PF00392 Bacterial regulatory proteins, gntR family M3Q_2303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2303 PF03466 LysR substrate binding domain M3Q_2304 PF13378 Enolase C-terminal domain-like M3Q_2304 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M3Q_2305 PF02426 Muconolactone delta-isomerase M3Q_2306 PF00775 Dioxygenase M3Q_2306 PF04444 Catechol dioxygenase N terminus M3Q_2307 PF01144 Coenzyme A transferase M3Q_2308 PF01144 Coenzyme A transferase M3Q_2309 PF02803 Thiolase, C-terminal domain M3Q_2309 PF00108 Thiolase, N-terminal domain M3Q_231 PF00156 Phosphoribosyl transferase domain M3Q_2310 PF12146 Serine aminopeptidase, S33 M3Q_2311 PF01804 Penicillin amidase M3Q_2312 PF00171 Aldehyde dehydrogenase family M3Q_2314 PF07833 Copper amine oxidase N-terminal domain M3Q_2314 PF02727 Copper amine oxidase, N2 domain M3Q_2314 PF01179 Copper amine oxidase, enzyme domain M3Q_2314 PF02728 Copper amine oxidase, N3 domain M3Q_2315 PF12833 Helix-turn-helix domain M3Q_2315 PF02311 AraC-like ligand binding domain M3Q_2316 PF01613 Flavin reductase like domain M3Q_2317 PF00175 Oxidoreductase NAD-binding domain M3Q_2317 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2320 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_2320 PF00355 Rieske [2Fe-2S] domain M3Q_2323 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2324 PF01425 Amidase M3Q_2326 PF07690 Major Facilitator Superfamily M3Q_2328 PF00106 short chain dehydrogenase M3Q_233 PF01979 Amidohydrolase family M3Q_2331 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2331 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2331 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2332 PF03466 LysR substrate binding domain M3Q_2332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2333 PF09339 IclR helix-turn-helix domain M3Q_2333 PF01614 Bacterial transcriptional regulator M3Q_2334 PF00753 Metallo-beta-lactamase superfamily M3Q_2336 PF04143 Sulphur transport M3Q_2338 PF01011 PQQ enzyme repeat M3Q_2338 PF13360 PQQ-like domain M3Q_2339 PF04966 Carbohydrate-selective porin, OprB family M3Q_234 PF00355 Rieske [2Fe-2S] domain M3Q_2340 PF05048 Periplasmic copper-binding protein (NosD) M3Q_2341 PF01487 Type I 3-dehydroquinase M3Q_2342 PF00775 Dioxygenase M3Q_2343 PF00775 Dioxygenase M3Q_2343 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M3Q_2344 PF02627 Carboxymuconolactone decarboxylase family M3Q_2345 PF07690 Major Facilitator Superfamily M3Q_2346 PF00561 alpha/beta hydrolase fold M3Q_2347 PF10397 Adenylosuccinate lyase C-terminus M3Q_2347 PF00206 Lyase M3Q_2348 PF02803 Thiolase, C-terminal domain M3Q_2348 PF00108 Thiolase, N-terminal domain M3Q_2349 PF01144 Coenzyme A transferase M3Q_2350 PF01144 Coenzyme A transferase M3Q_2351 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M3Q_2352 PF04977 Septum formation initiator M3Q_2353 PF04239 Protein of unknown function (DUF421) M3Q_2354 PF00113 Enolase, C-terminal TIM barrel domain M3Q_2354 PF03952 Enolase, N-terminal domain M3Q_2355 PF00793 DAHP synthetase I family M3Q_2356 PF06418 CTP synthase N-terminus M3Q_2356 PF00117 Glutamine amidotransferase class-I M3Q_236 PF02463 RecF/RecN/SMC N terminal domain M3Q_2362 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_2362 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2365 PF00793 DAHP synthetase I family M3Q_2366 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M3Q_2367 PF17871 AAA lid domain M3Q_2367 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_2367 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_2367 PF02861 Clp amino terminal domain, pathogenicity island component M3Q_2367 PF07724 AAA domain (Cdc48 subfamily) M3Q_2368 PF02617 ATP-dependent Clp protease adaptor protein ClpS M3Q_237 PF00204 DNA gyrase B M3Q_237 PF01751 Toprim domain M3Q_237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_237 PF18053 DNA gyrase B subunit insert domain M3Q_237 PF00986 DNA gyrase B subunit, carboxyl terminus M3Q_2370 PF01118 Semialdehyde dehydrogenase, NAD binding domain M3Q_2370 PF02774 Semialdehyde dehydrogenase, dimerisation domain M3Q_2373 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M3Q_2374 PF00585 C-terminal regulatory domain of Threonine dehydratase M3Q_2374 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_2375 PF02080 TrkA-C domain M3Q_2375 PF02254 TrkA-N domain M3Q_2376 PF02386 Cation transport protein M3Q_2377 PF02253 Phospholipase A1 M3Q_2378 PF05193 Peptidase M16 inactive domain M3Q_2378 PF00675 Insulinase (Peptidase family M16) M3Q_2378 PF08367 Peptidase M16C associated M3Q_2379 PF00593 TonB dependent receptor M3Q_2379 PF07715 TonB-dependent Receptor Plug Domain M3Q_2380 PF00294 pfkB family carbohydrate kinase M3Q_2382 PF07290 Protein of unknown function (DUF1449) M3Q_2384 PF01654 Cytochrome bd terminal oxidase subunit I M3Q_2385 PF02322 Cytochrome bd terminal oxidase subunit II M3Q_2386 PF08173 Membrane bound YbgT-like protein M3Q_2389 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M3Q_239 PF09335 SNARE associated Golgi protein M3Q_2391 PF00448 SRP54-type protein, GTPase domain M3Q_2391 PF02881 SRP54-type protein, helical bundle domain M3Q_2396 PF00571 CBS domain M3Q_2396 PF00478 IMP dehydrogenase / GMP reductase domain M3Q_2397 PF00202 Aminotransferase class-III M3Q_2398 PF00462 Glutaredoxin M3Q_24 PF06942 GlpM protein M3Q_240 PF00005 ABC transporter M3Q_240 PF12848 ABC transporter M3Q_2400 PF03466 LysR substrate binding domain M3Q_2400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2401 PF00557 Metallopeptidase family M24 M3Q_2402 PF05525 Branched-chain amino acid transport protein M3Q_2407 PF00391 PEP-utilising enzyme, mobile domain M3Q_2407 PF02896 PEP-utilising enzyme, TIM barrel domain M3Q_2407 PF00381 PTS HPr component phosphorylation site M3Q_2407 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M3Q_2407 PF05524 PEP-utilising enzyme, N-terminal M3Q_2408 PF00294 pfkB family carbohydrate kinase M3Q_2409 PF00294 pfkB family carbohydrate kinase M3Q_2410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3Q_2410 PF02378 Phosphotransferase system, EIIC M3Q_2415 PF00990 Diguanylate cyclase, GGDEF domain M3Q_2415 PF03707 Bacterial signalling protein N terminal repeat M3Q_2415 PF00563 EAL domain M3Q_2417 PF07995 Glucose / Sorbosone dehydrogenase M3Q_2418 PF02586 SOS response associated peptidase (SRAP) M3Q_2419 PF01740 STAS domain M3Q_2419 PF00916 Sulfate permease family M3Q_2420 PF05922 Peptidase inhibitor I9 M3Q_2420 PF00082 Subtilase family M3Q_2422 PF00324 Amino acid permease M3Q_2423 PF00266 Aminotransferase class-V M3Q_2424 PF01037 Lrp/AsnC ligand binding domain M3Q_2429 PF13419 Haloacid dehalogenase-like hydrolase M3Q_2430 PF01479 S4 domain M3Q_2431 PF00154 recA bacterial DNA recombination protein M3Q_2432 PF02631 RecX family M3Q_2434 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M3Q_2434 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2435 PF07977 FabA-like domain M3Q_2436 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2436 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M3Q_2438 PF07244 Surface antigen variable number repeat M3Q_2438 PF01103 Surface antigen M3Q_2439 PF13180 PDZ domain M3Q_2439 PF02163 Peptidase family M50 M3Q_2439 PF17820 PDZ domain M3Q_244 PF01521 Iron-sulphur cluster biosynthesis M3Q_2440 PF13288 DXP reductoisomerase C-terminal domain M3Q_2440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M3Q_2440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M3Q_2442 PF01255 Putative undecaprenyl diphosphate synthase M3Q_2443 PF01765 Ribosome recycling factor M3Q_2444 PF00696 Amino acid kinase family M3Q_2445 PF18693 TRAM domain M3Q_2445 PF00919 Uncharacterized protein family UPF0004 M3Q_2445 PF04055 Radical SAM superfamily M3Q_2446 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2446 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2446 PF00989 PAS fold M3Q_2447 PF00158 Sigma-54 interaction domain M3Q_2447 PF00072 Response regulator receiver domain M3Q_2447 PF02954 Bacterial regulatory protein, Fis family M3Q_2448 PF00440 Bacterial regulatory proteins, tetR family M3Q_2449 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3Q_2449 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3Q_245 PF00561 alpha/beta hydrolase fold M3Q_2451 PF02542 YgbB family M3Q_2453 PF01266 FAD dependent oxidoreductase M3Q_2457 PF10415 Fumarase C C-terminus M3Q_2457 PF00206 Lyase M3Q_2458 PF16363 GDP-mannose 4,6 dehydratase M3Q_2459 PF02635 DsrE/DsrF-like family M3Q_246 PF03702 Anhydro-N-acetylmuramic acid kinase M3Q_2463 PF00892 EamA-like transporter family M3Q_2464 PF00392 Bacterial regulatory proteins, gntR family M3Q_2464 PF00155 Aminotransferase class I and II M3Q_2465 PF01638 HxlR-like helix-turn-helix M3Q_2466 PF03453 MoeA N-terminal region (domain I and II) M3Q_2466 PF03454 MoeA C-terminal region (domain IV) M3Q_2466 PF00994 Probable molybdopterin binding domain M3Q_2467 PF00994 Probable molybdopterin binding domain M3Q_2467 PF01967 MoaC family M3Q_2468 PF02391 MoaE protein M3Q_247 PF00579 tRNA synthetases class I (W and Y) M3Q_2470 PF06463 Molybdenum Cofactor Synthesis C M3Q_2470 PF04055 Radical SAM superfamily M3Q_2471 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M3Q_2471 PF00384 Molybdopterin oxidoreductase M3Q_2471 PF01568 Molydopterin dinucleotide binding domain M3Q_2472 PF12804 MobA-like NTP transferase domain M3Q_2473 PF00384 Molybdopterin oxidoreductase M3Q_2473 PF01568 Molydopterin dinucleotide binding domain M3Q_2473 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M3Q_2473 PF04324 BFD-like [2Fe-2S] binding domain M3Q_2474 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2474 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M3Q_2474 PF18267 Rubredoxin NAD+ reductase C-terminal domain M3Q_2474 PF04324 BFD-like [2Fe-2S] binding domain M3Q_2474 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M3Q_2475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M3Q_2475 PF04324 BFD-like [2Fe-2S] binding domain M3Q_2475 PF18267 Rubredoxin NAD+ reductase C-terminal domain M3Q_2475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M3Q_2475 PF13806 Rieske-like [2Fe-2S] domain M3Q_2476 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M3Q_2476 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2476 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M3Q_2476 PF04324 BFD-like [2Fe-2S] binding domain M3Q_2476 PF18267 Rubredoxin NAD+ reductase C-terminal domain M3Q_2478 PF00072 Response regulator receiver domain M3Q_2478 PF00486 Transcriptional regulatory protein, C terminal M3Q_2479 PF00005 ABC transporter M3Q_2480 PF11799 impB/mucB/samB family C-terminal domain M3Q_2480 PF00817 impB/mucB/samB family M3Q_2480 PF13438 Domain of unknown function (DUF4113) M3Q_2481 PF01220 Dehydroquinase class II M3Q_2482 PF00364 Biotin-requiring enzyme M3Q_2483 PF00289 Biotin carboxylase, N-terminal domain M3Q_2483 PF02785 Biotin carboxylase C-terminal domain M3Q_2483 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_2485 PF12832 MFS_1 like family M3Q_2489 PF01645 Conserved region in glutamate synthase M3Q_2492 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M3Q_2492 PF01565 FAD binding domain M3Q_2493 PF01451 Low molecular weight phosphotyrosine protein phosphatase M3Q_2495 PF00465 Iron-containing alcohol dehydrogenase M3Q_2496 PF03061 Thioesterase superfamily M3Q_2497 PF05506 Domain of unknown function (DUF756) M3Q_2497 PF04185 Phosphoesterase family M3Q_2499 PF12169 DNA polymerase III subunits gamma and tau domain III M3Q_2499 PF12170 DNA polymerase III tau subunit V interacting with alpha M3Q_2499 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M3Q_250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_2500 PF07690 Major Facilitator Superfamily M3Q_2505 PF02803 Thiolase, C-terminal domain M3Q_2505 PF00108 Thiolase, N-terminal domain M3Q_2507 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2507 PF03466 LysR substrate binding domain M3Q_2509 PF01810 LysE type translocator M3Q_251 PF01252 Signal peptidase (SPase) II M3Q_2510 PF01037 Lrp/AsnC ligand binding domain M3Q_2511 PF03594 Benzoate membrane transport protein M3Q_2512 PF02308 MgtC family M3Q_2513 PF00690 Cation transporter/ATPase, N-terminus M3Q_2513 PF00689 Cation transporting ATPase, C-terminus M3Q_2518 PF00582 Universal stress protein family M3Q_2519 PF00005 ABC transporter M3Q_2519 PF12848 ABC transporter M3Q_252 PF08264 Anticodon-binding domain of tRNA M3Q_252 PF00133 tRNA synthetases class I (I, L, M and V) M3Q_252 PF06827 Zinc finger found in FPG and IleRS M3Q_2523 PF07715 TonB-dependent Receptor Plug Domain M3Q_2523 PF00593 TonB dependent receptor M3Q_253 PF01687 Riboflavin kinase M3Q_253 PF06574 FAD synthetase M3Q_2531 PF00924 Mechanosensitive ion channel M3Q_2532 PF00593 TonB dependent receptor M3Q_2532 PF07715 TonB-dependent Receptor Plug Domain M3Q_2533 PF00440 Bacterial regulatory proteins, tetR family M3Q_2535 PF01037 Lrp/AsnC ligand binding domain M3Q_2536 PF01817 Chorismate mutase type II M3Q_2538 PF00106 short chain dehydrogenase M3Q_2540 PF11940 Domain of unknown function (DUF3458) Ig-like fold M3Q_2540 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M3Q_2540 PF01433 Peptidase family M1 domain M3Q_2543 PF02110 Hydroxyethylthiazole kinase family M3Q_2544 PF06445 GyrI-like small molecule binding domain M3Q_2546 PF14493 Helix-turn-helix domain M3Q_2546 PF05970 PIF1-like helicase M3Q_2547 PF00465 Iron-containing alcohol dehydrogenase M3Q_255 PF01048 Phosphorylase superfamily M3Q_2550 PF00171 Aldehyde dehydrogenase family M3Q_2551 PF13520 Amino acid permease M3Q_2552 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M3Q_2553 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M3Q_2554 PF00117 Glutamine amidotransferase class-I M3Q_2554 PF02540 NAD synthase M3Q_2554 PF00958 GMP synthase C terminal domain M3Q_2555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M3Q_2555 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3Q_2556 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3Q_2557 PF00149 Calcineurin-like phosphoesterase M3Q_2559 PF00881 Nitroreductase family M3Q_256 PF00440 Bacterial regulatory proteins, tetR family M3Q_256 PF08362 YcdC-like protein, C-terminal region M3Q_2561 PF17209 Hfq protein M3Q_2563 PF08676 MutL C terminal dimerisation domain M3Q_2563 PF01119 DNA mismatch repair protein, C-terminal domain M3Q_2564 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M3Q_2565 PF00849 RNA pseudouridylate synthase M3Q_2565 PF01479 S4 domain M3Q_2568 PF01479 S4 domain M3Q_2568 PF00849 RNA pseudouridylate synthase M3Q_257 PF00005 ABC transporter M3Q_2570 PF04284 Protein of unknown function (DUF441) M3Q_2571 PF03466 LysR substrate binding domain M3Q_2571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2574 PF07690 Major Facilitator Superfamily M3Q_2575 PF00027 Cyclic nucleotide-binding domain M3Q_2575 PF00520 Ion transport protein M3Q_2577 PF00330 Aconitase family (aconitate hydratase) M3Q_2577 PF06434 Aconitate hydratase 2 N-terminus M3Q_2577 PF11791 Aconitate B N-terminal domain M3Q_258 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2580 PF17243 POTRA domain TamA domain 1 M3Q_2580 PF07244 Surface antigen variable number repeat M3Q_2580 PF01103 Surface antigen M3Q_2581 PF07690 Major Facilitator Superfamily M3Q_2582 PF03232 Ubiquinone biosynthesis protein COQ7 M3Q_2584 PF00120 Glutamine synthetase, catalytic domain M3Q_2585 PF00486 Transcriptional regulatory protein, C terminal M3Q_2585 PF00072 Response regulator receiver domain M3Q_2586 PF02702 Osmosensitive K+ channel His kinase sensor domain M3Q_2586 PF13493 Domain of unknown function (DUF4118) M3Q_2586 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2587 PF02669 K+-transporting ATPase, c chain M3Q_2589 PF03814 Potassium-transporting ATPase A subunit M3Q_259 PF00296 Luciferase-like monooxygenase M3Q_2592 PF03109 ABC1 family M3Q_2593 PF00899 ThiF family M3Q_2594 PF01613 Flavin reductase like domain M3Q_2595 PF13193 AMP-binding enzyme C-terminal domain M3Q_2595 PF00501 AMP-binding enzyme M3Q_2596 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2596 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2596 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2597 PF00106 short chain dehydrogenase M3Q_2598 PF12833 Helix-turn-helix domain M3Q_2599 PF09084 NMT1/THI5 like M3Q_26 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_26 PF00107 Zinc-binding dehydrogenase M3Q_260 PF09084 NMT1/THI5 like M3Q_2600 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2601 PF13847 Methyltransferase domain M3Q_2601 PF17827 PrmC N-terminal domain M3Q_2602 PF00472 RF-1 domain M3Q_2602 PF03462 PCRF domain M3Q_2604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2604 PF03466 LysR substrate binding domain M3Q_2607 PF00296 Luciferase-like monooxygenase M3Q_2609 PF13994 PgaD-like protein M3Q_261 PF09084 NMT1/THI5 like M3Q_2610 PF00535 Glycosyl transferase family 2 M3Q_2611 PF01522 Polysaccharide deacetylase M3Q_2611 PF14883 Hypothetical glycosyl hydrolase family 13 M3Q_2613 PF03618 Kinase/pyrophosphorylase M3Q_2614 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M3Q_2614 PF02896 PEP-utilising enzyme, TIM barrel domain M3Q_2614 PF00391 PEP-utilising enzyme, mobile domain M3Q_2616 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M3Q_2616 PF06481 COX Aromatic Rich Motif M3Q_2617 PF00115 Cytochrome C and Quinol oxidase polypeptide I M3Q_2618 PF00510 Cytochrome c oxidase subunit III M3Q_2619 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M3Q_262 PF00583 Acetyltransferase (GNAT) family M3Q_262 PF00696 Amino acid kinase family M3Q_2620 PF01040 UbiA prenyltransferase family M3Q_2621 PF01250 Ribosomal protein S6 M3Q_2622 PF01084 Ribosomal protein S18 M3Q_2624 PF00772 DnaB-like helicase N terminal domain M3Q_2624 PF03796 DnaB-like helicase C terminal domain M3Q_2625 PF00842 Alanine racemase, C-terminal domain M3Q_2625 PF01168 Alanine racemase, N-terminal domain M3Q_2627 PF01841 Transglutaminase-like superfamily M3Q_2627 PF08379 Bacterial transglutaminase-like N-terminal region M3Q_2629 PF14403 Circularly permuted ATP-grasp type 2 M3Q_2631 PF13932 GidA associated domain M3Q_2631 PF01134 Glucose inhibited division protein A M3Q_2635 PF02954 Bacterial regulatory protein, Fis family M3Q_2636 PF01808 AICARFT/IMPCHase bienzyme M3Q_2636 PF02142 MGS-like domain M3Q_2637 PF02843 Phosphoribosylglycinamide synthetase, C domain M3Q_2637 PF02844 Phosphoribosylglycinamide synthetase, N domain M3Q_2637 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M3Q_2638 PF03180 NLPA lipoprotein M3Q_2639 PF09383 NIL domain M3Q_2639 PF00005 ABC transporter M3Q_2640 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2641 PF00753 Metallo-beta-lactamase superfamily M3Q_2641 PF16123 Hydroxyacylglutathione hydrolase C-terminus M3Q_2643 PF00375 Sodium:dicarboxylate symporter family M3Q_2646 PF13610 DDE domain M3Q_2647 PF01051 Initiator Replication protein M3Q_265 PF00106 short chain dehydrogenase M3Q_2651 PF13817 IS66 C-terminal element M3Q_2651 PF13005 zinc-finger binding domain of transposase IS66 M3Q_2651 PF13007 Transposase C of IS166 homeodomain M3Q_2651 PF03050 Transposase IS66 family M3Q_2653 PF01636 Phosphotransferase enzyme family M3Q_2657 PF07091 Ribosomal RNA methyltransferase (FmrO) M3Q_2658 PF13737 Transposase DDE domain M3Q_266 PF13419 Haloacid dehalogenase-like hydrolase M3Q_2660 PF00809 Pterin binding enzyme M3Q_2661 PF00893 Small Multidrug Resistance protein M3Q_2662 PF13427 Domain of unknown function (DUF4111) M3Q_2662 PF01909 Nucleotidyltransferase domain M3Q_2663 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2665 PF00589 Phage integrase family M3Q_2665 PF13495 Phage integrase, N-terminal SAM-like domain M3Q_2666 PF13610 DDE domain M3Q_2668 PF07995 Glucose / Sorbosone dehydrogenase M3Q_2669 PF07995 Glucose / Sorbosone dehydrogenase M3Q_2670 PF00892 EamA-like transporter family M3Q_2671 PF01177 Asp/Glu/Hydantoin racemase M3Q_2673 PF02470 MlaD protein M3Q_2674 PF04403 Paraquat-inducible protein A M3Q_2676 PF02080 TrkA-C domain M3Q_2676 PF06826 Predicted Permease Membrane Region M3Q_2677 PF00155 Aminotransferase class I and II M3Q_268 PF01323 DSBA-like thioredoxin domain M3Q_2680 PF00083 Sugar (and other) transporter M3Q_2680 PF08946 Osmosensory transporter coiled coil M3Q_269 PF00440 Bacterial regulatory proteins, tetR family M3Q_269 PF08360 QacR-like protein, C-terminal region M3Q_2690 PF07729 FCD domain M3Q_2690 PF00392 Bacterial regulatory proteins, gntR family M3Q_2692 PF03616 Sodium/glutamate symporter M3Q_2693 PF00561 alpha/beta hydrolase fold M3Q_2698 PF04076 Bacterial OB fold (BOF) protein M3Q_27 PF00440 Bacterial regulatory proteins, tetR family M3Q_27 PF16925 Tetracyclin repressor-like, C-terminal domain M3Q_270 PF00440 Bacterial regulatory proteins, tetR family M3Q_2704 PF00324 Amino acid permease M3Q_2705 PF00171 Aldehyde dehydrogenase family M3Q_2706 PF00202 Aminotransferase class-III M3Q_2707 PF03466 LysR substrate binding domain M3Q_2707 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2708 PF00069 Protein kinase domain M3Q_271 PF00175 Oxidoreductase NAD-binding domain M3Q_2712 PF00814 Glycoprotease family M3Q_2713 PF01165 Ribosomal protein S21 M3Q_2714 PF09424 Yqey-like protein M3Q_2715 PF01435 Peptidase family M48 M3Q_2716 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_2716 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_2719 PF00156 Phosphoribosyl transferase domain M3Q_272 PF00487 Fatty acid desaturase M3Q_2720 PF02674 Colicin V production protein M3Q_2721 PF01180 Dihydroorotate dehydrogenase M3Q_2725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M3Q_2725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M3Q_2726 PF00881 Nitroreductase family M3Q_2728 PF00270 DEAD/DEAH box helicase M3Q_2728 PF00271 Helicase conserved C-terminal domain M3Q_2729 PF00313 'Cold-shock' DNA-binding domain M3Q_273 PF01138 3' exoribonuclease family, domain 1 M3Q_273 PF03725 3' exoribonuclease family, domain 2 M3Q_2731 PF04545 Sigma-70, region 4 M3Q_2731 PF00140 Sigma-70 factor, region 1.2 M3Q_2731 PF04542 Sigma-70 region 2 M3Q_2732 PF04241 Protein of unknown function (DUF423) M3Q_2734 PF05690 Thiazole biosynthesis protein ThiG M3Q_2736 PF03883 Peroxide stress protein YaaA M3Q_2738 PF12706 Beta-lactamase superfamily domain M3Q_2739 PF01546 Peptidase family M20/M25/M40 M3Q_2739 PF07687 Peptidase dimerisation domain M3Q_274 PF05506 Domain of unknown function (DUF756) M3Q_274 PF04185 Phosphoesterase family M3Q_2741 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3Q_2742 PF01817 Chorismate mutase type II M3Q_2742 PF00800 Prephenate dehydratase M3Q_2742 PF01842 ACT domain M3Q_2743 PF00756 Putative esterase M3Q_2744 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2744 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2744 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2745 PF00375 Sodium:dicarboxylate symporter family M3Q_2746 PF02885 Glycosyl transferase family, helical bundle domain M3Q_2746 PF00591 Glycosyl transferase family, a/b domain M3Q_2747 PF07023 Protein of unknown function (DUF1315) M3Q_2748 PF01513 ATP-NAD kinase M3Q_2749 PF00905 Penicillin binding protein transpeptidase domain M3Q_2749 PF14814 Bifunctional transglycosylase second domain M3Q_2749 PF00912 Transglycosylase M3Q_2751 PF00293 NUDIX domain M3Q_2753 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2753 PF08521 Two-component sensor kinase N-terminal M3Q_2754 PF00486 Transcriptional regulatory protein, C terminal M3Q_2754 PF00072 Response regulator receiver domain M3Q_2756 PF00437 Type II/IV secretion system protein M3Q_2758 PF01980 tRNA-methyltransferase O M3Q_2758 PF18389 TrmO C-terminal domain M3Q_2759 PF00175 Oxidoreductase NAD-binding domain M3Q_2759 PF00970 Oxidoreductase FAD-binding domain M3Q_276 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M3Q_276 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M3Q_2760 PF02567 Phenazine biosynthesis-like protein M3Q_2761 PF00155 Aminotransferase class I and II M3Q_2761 PF00392 Bacterial regulatory proteins, gntR family M3Q_2763 PF00037 4Fe-4S binding domain M3Q_2764 PF00893 Small Multidrug Resistance protein M3Q_2765 PF00005 ABC transporter M3Q_2766 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2767 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2768 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_2769 PF03466 LysR substrate binding domain M3Q_2769 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_277 PF01510 N-acetylmuramoyl-L-alanine amidase M3Q_2770 PF13533 Biotin-lipoyl like M3Q_2771 PF00873 AcrB/AcrD/AcrF family M3Q_2772 PF02321 Outer membrane efflux protein M3Q_2773 PF00464 Serine hydroxymethyltransferase M3Q_2778 PF00005 ABC transporter M3Q_2779 PF01061 ABC-2 type transporter M3Q_278 PF03023 Lipid II flippase MurJ M3Q_2780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M3Q_2780 PF14489 QueF-like protein M3Q_2782 PF01098 Cell cycle protein M3Q_2783 PF13406 Transglycosylase SLT domain M3Q_2784 PF05036 Sporulation related domain M3Q_2784 PF03330 Lytic transglycolase M3Q_2788 PF12833 Helix-turn-helix domain M3Q_279 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_279 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M3Q_2790 PF00889 Elongation factor TS M3Q_2791 PF00318 Ribosomal protein S2 M3Q_2792 PF00557 Metallopeptidase family M24 M3Q_2794 PF07690 Major Facilitator Superfamily M3Q_2797 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_2797 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2798 PF04055 Radical SAM superfamily M3Q_2799 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2799 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2799 PF09317 Domain of unknown function (DUF1974) M3Q_28 PF17760 UvrA interaction domain M3Q_28 PF17755 UvrA DNA-binding domain M3Q_28 PF00005 ABC transporter M3Q_280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M3Q_280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_2802 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M3Q_2802 PF05221 S-adenosyl-L-homocysteine hydrolase M3Q_2803 PF02219 Methylenetetrahydrofolate reductase M3Q_2804 PF04452 RNA methyltransferase M3Q_2805 PF00563 EAL domain M3Q_2805 PF00990 Diguanylate cyclase, GGDEF domain M3Q_2805 PF03707 Bacterial signalling protein N terminal repeat M3Q_2806 PF00390 Malic enzyme, N-terminal domain M3Q_2806 PF01515 Phosphate acetyl/butaryl transferase M3Q_2806 PF03949 Malic enzyme, NAD binding domain M3Q_2807 PF12627 Probable RNA and SrmB- binding site of polymerase A M3Q_2807 PF01743 Poly A polymerase head domain M3Q_2808 PF13180 PDZ domain M3Q_2809 PF01784 NIF3 (NGG1p interacting factor 3) M3Q_281 PF13614 AAA domain M3Q_281 PF13807 G-rich domain on putative tyrosine kinase M3Q_281 PF02706 Chain length determinant protein M3Q_2810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M3Q_2810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M3Q_2814 PF01040 UbiA prenyltransferase family M3Q_2815 PF04345 Chorismate lyase M3Q_2817 PF00854 POT family M3Q_2819 PF00117 Glutamine amidotransferase class-I M3Q_282 PF01451 Low molecular weight phosphotyrosine protein phosphatase M3Q_2820 PF11838 ERAP1-like C-terminal domain M3Q_2820 PF01433 Peptidase family M1 domain M3Q_2821 PF00593 TonB dependent receptor M3Q_2821 PF07715 TonB-dependent Receptor Plug Domain M3Q_2822 PF00591 Glycosyl transferase family, a/b domain M3Q_2822 PF02885 Glycosyl transferase family, helical bundle domain M3Q_2823 PF00218 Indole-3-glycerol phosphate synthase M3Q_2826 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M3Q_2826 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M3Q_2827 PF01799 [2Fe-2S] binding domain M3Q_2827 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_283 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M3Q_283 PF10531 SLBB domain M3Q_283 PF02563 Polysaccharide biosynthesis/export protein M3Q_2831 PF00144 Beta-lactamase M3Q_2834 PF05675 Protein of unknown function (DUF817) M3Q_2835 PF01208 Uroporphyrinogen decarboxylase (URO-D) M3Q_2837 PF00425 chorismate binding enzyme M3Q_2839 PF00975 Thioesterase domain M3Q_284 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M3Q_284 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3Q_284 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3Q_2840 PF00664 ABC transporter transmembrane region M3Q_2840 PF00005 ABC transporter M3Q_2841 PF00664 ABC transporter transmembrane region M3Q_2841 PF00005 ABC transporter M3Q_2843 PF00282 Pyridoxal-dependent decarboxylase conserved domain M3Q_2844 PF00857 Isochorismatase family M3Q_2844 PF00550 Phosphopantetheine attachment site M3Q_2845 PF00501 AMP-binding enzyme M3Q_2845 PF13193 AMP-binding enzyme C-terminal domain M3Q_2846 PF00550 Phosphopantetheine attachment site M3Q_2846 PF00668 Condensation domain M3Q_2846 PF00501 AMP-binding enzyme M3Q_2847 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M3Q_2848 PF00593 TonB dependent receptor M3Q_2848 PF07715 TonB-dependent Receptor Plug Domain M3Q_2849 PF01497 Periplasmic binding protein M3Q_285 PF16363 GDP-mannose 4,6 dehydratase M3Q_2850 PF00005 ABC transporter M3Q_2851 PF01032 FecCD transport family M3Q_2852 PF01032 FecCD transport family M3Q_2855 PF13193 AMP-binding enzyme C-terminal domain M3Q_2855 PF00668 Condensation domain M3Q_2855 PF00550 Phosphopantetheine attachment site M3Q_2855 PF00975 Thioesterase domain M3Q_2855 PF00501 AMP-binding enzyme M3Q_2856 PF00550 Phosphopantetheine attachment site M3Q_2856 PF00668 Condensation domain M3Q_2856 PF13193 AMP-binding enzyme C-terminal domain M3Q_2856 PF00501 AMP-binding enzyme M3Q_2858 PF08348 YheO-like PAS domain M3Q_2858 PF13309 HTH domain M3Q_2859 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_286 PF00483 Nucleotidyl transferase M3Q_2860 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_2861 PF02678 Pirin M3Q_2861 PF17954 Quercetinase C-terminal cupin domain M3Q_2864 PF00440 Bacterial regulatory proteins, tetR family M3Q_2865 PF16197 Ketoacyl-synthetase C-terminal extension M3Q_2865 PF14765 Polyketide synthase dehydratase M3Q_2865 PF00550 Phosphopantetheine attachment site M3Q_2865 PF08659 KR domain M3Q_2865 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_2865 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_2865 PF09277 Erythronolide synthase, docking M3Q_2865 PF08990 Erythronolide synthase docking M3Q_2865 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2865 PF00698 Acyl transferase domain M3Q_2866 PF13378 Enolase C-terminal domain-like M3Q_2866 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M3Q_2867 PF00083 Sugar (and other) transporter M3Q_2868 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M3Q_287 PF05523 WxcM-like, C-terminal M3Q_2870 PF00892 EamA-like transporter family M3Q_2874 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M3Q_2874 PF01266 FAD dependent oxidoreductase M3Q_2875 PF18113 Rubredoxin binding C-terminal domain M3Q_2875 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2877 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_2877 PF00355 Rieske [2Fe-2S] domain M3Q_2878 PF02028 BCCT, betaine/carnitine/choline family transporter M3Q_2879 PF02028 BCCT, betaine/carnitine/choline family transporter M3Q_2880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2880 PF03466 LysR substrate binding domain M3Q_2881 PF00324 Amino acid permease M3Q_2882 PF00171 Aldehyde dehydrogenase family M3Q_2885 PF13556 PucR C-terminal helix-turn-helix domain M3Q_2885 PF17853 GGDEF-like domain M3Q_2885 PF06018 CodY GAF-like domain M3Q_289 PF01575 MaoC like domain M3Q_2891 PF04328 Selenoprotein, putative M3Q_2892 PF02554 Carbon starvation protein CstA M3Q_2892 PF13722 5TM C-terminal transporter carbon starvation CstA M3Q_2893 PF01132 Elongation factor P (EF-P) OB domain M3Q_2893 PF08207 Elongation factor P (EF-P) KOW-like domain M3Q_2893 PF09285 Elongation factor P, C-terminal M3Q_2894 PF04055 Radical SAM superfamily M3Q_290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M3Q_2910 PF04860 Phage portal protein M3Q_2911 PF03354 Phage Terminase M3Q_292 PF00535 Glycosyl transferase family 2 M3Q_2922 PF01381 Helix-turn-helix M3Q_2922 PF00717 Peptidase S24-like M3Q_293 PF00862 Sucrose synthase M3Q_293 PF00534 Glycosyl transferases group 1 M3Q_2930 PF00589 Phage integrase family M3Q_2931 PF04328 Selenoprotein, putative M3Q_2932 PF13722 5TM C-terminal transporter carbon starvation CstA M3Q_2932 PF02554 Carbon starvation protein CstA M3Q_2933 PF08207 Elongation factor P (EF-P) KOW-like domain M3Q_2933 PF01132 Elongation factor P (EF-P) OB domain M3Q_2933 PF09285 Elongation factor P, C-terminal M3Q_2934 PF04055 Radical SAM superfamily M3Q_2937 PF01197 Ribosomal protein L31 M3Q_2938 PF13593 SBF-like CPA transporter family (DUF4137) M3Q_2939 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_2940 PF07690 Major Facilitator Superfamily M3Q_2941 PF05362 Lon protease (S16) C-terminal proteolytic domain M3Q_2941 PF13654 AAA domain M3Q_2942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2942 PF03466 LysR substrate binding domain M3Q_2943 PF01476 LysM domain M3Q_2943 PF01551 Peptidase family M23 M3Q_2944 PF01975 Survival protein SurE M3Q_2947 PF07943 Penicillin-binding protein 5, C-terminal domain M3Q_2947 PF00768 D-alanyl-D-alanine carboxypeptidase M3Q_2948 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2949 PF00293 NUDIX domain M3Q_2949 PF13344 Haloacid dehalogenase-like hydrolase M3Q_295 PF00534 Glycosyl transferases group 1 M3Q_2951 PF04356 Protein of unknown function (DUF489) M3Q_2952 PF00206 Lyase M3Q_2952 PF08328 Adenylosuccinate lyase C-terminal M3Q_2955 PF01343 Peptidase family S49 M3Q_2955 PF08496 Peptidase family S49 N-terminal M3Q_2956 PF00005 ABC transporter M3Q_2957 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2958 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2959 PF12849 PBP superfamily domain M3Q_296 PF00535 Glycosyl transferase family 2 M3Q_2960 PF00324 Amino acid permease M3Q_2961 PF00205 Thiamine pyrophosphate enzyme, central domain M3Q_2961 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3Q_2961 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3Q_2962 PF01037 Lrp/AsnC ligand binding domain M3Q_2963 PF00171 Aldehyde dehydrogenase family M3Q_2964 PF00282 Pyridoxal-dependent decarboxylase conserved domain M3Q_2965 PF00202 Aminotransferase class-III M3Q_2967 PF17754 MftR C-terminal domain M3Q_2967 PF00440 Bacterial regulatory proteins, tetR family M3Q_2969 PF00487 Fatty acid desaturase M3Q_297 PF02397 Bacterial sugar transferase M3Q_2970 PF00970 Oxidoreductase FAD-binding domain M3Q_2970 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2970 PF00175 Oxidoreductase NAD-binding domain M3Q_2971 PF00440 Bacterial regulatory proteins, tetR family M3Q_2973 PF12137 RNA polymerase recycling family C-terminal M3Q_2973 PF00176 SNF2 family N-terminal domain M3Q_2973 PF00271 Helicase conserved C-terminal domain M3Q_2973 PF18337 RapA N-terminal Tudor like domain M3Q_2973 PF18339 RapA N-terminal Tudor like domain 1 M3Q_2974 PF00849 RNA pseudouridylate synthase M3Q_2976 PF00202 Aminotransferase class-III M3Q_2977 PF02581 Thiamine monophosphate synthase M3Q_298 PF00483 Nucleotidyl transferase M3Q_2982 PF00675 Insulinase (Peptidase family M16) M3Q_2982 PF05193 Peptidase M16 inactive domain M3Q_2983 PF02567 Phenazine biosynthesis-like protein M3Q_2985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2985 PF03466 LysR substrate binding domain M3Q_2986 PF06779 Uncharacterised MFS-type transporter YbfB M3Q_2989 PF00180 Isocitrate/isopropylmalate dehydrogenase M3Q_299 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3Q_299 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M3Q_299 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3Q_2990 PF00849 RNA pseudouridylate synthase M3Q_2991 PF03971 Monomeric isocitrate dehydrogenase M3Q_2993 PF00768 D-alanyl-D-alanine carboxypeptidase M3Q_2993 PF07943 Penicillin-binding protein 5, C-terminal domain M3Q_2994 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_2996 PF00875 DNA photolyase M3Q_2996 PF03441 FAD binding domain of DNA photolyase M3Q_30 PF00990 Diguanylate cyclase, GGDEF domain M3Q_30 PF17158 Membrane-associated sensor, integral membrane domain M3Q_300 PF00342 Phosphoglucose isomerase M3Q_3002 PF02350 UDP-N-acetylglucosamine 2-epimerase M3Q_3005 PF03060 Nitronate monooxygenase M3Q_3006 PF01207 Dihydrouridine synthase (Dus) M3Q_3007 PF07759 Protein of unknown function (DUF1615) M3Q_3009 PF00696 Amino acid kinase family M3Q_3009 PF01472 PUA domain M3Q_301 PF16363 GDP-mannose 4,6 dehydratase M3Q_3010 PF01926 50S ribosome-binding GTPase M3Q_3010 PF01018 GTP1/OBG M3Q_3013 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3Q_3013 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M3Q_3014 PF00892 EamA-like transporter family M3Q_3016 PF02151 UvrB/uvrC motif M3Q_3016 PF17757 UvrB interaction domain M3Q_3016 PF04851 Type III restriction enzyme, res subunit M3Q_3016 PF00271 Helicase conserved C-terminal domain M3Q_3016 PF12344 Ultra-violet resistance protein B M3Q_3018 PF17151 Periplasmic sensor domain M3Q_3018 PF00990 Diguanylate cyclase, GGDEF domain M3Q_3024 PF00106 short chain dehydrogenase M3Q_3025 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M3Q_3026 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M3Q_3027 PF11967 Recombination protein O N terminal M3Q_3027 PF02565 Recombination protein O C terminal M3Q_3029 PF07650 KH domain M3Q_3029 PF01926 50S ribosome-binding GTPase M3Q_303 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_303 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_303 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_303 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3Q_3030 PF00035 Double-stranded RNA binding motif M3Q_3030 PF14622 Ribonuclease-III-like M3Q_3032 PF10502 Signal peptidase, peptidase S26 M3Q_3033 PF06421 GTP-binding protein LepA C-terminus M3Q_3033 PF03144 Elongation factor Tu domain 2 M3Q_3033 PF00009 Elongation factor Tu GTP binding domain M3Q_3033 PF00679 Elongation factor G C-terminus M3Q_3035 PF13180 PDZ domain M3Q_3036 PF02910 Fumarate reductase flavoprotein C-term M3Q_3036 PF00890 FAD binding domain M3Q_3038 PF02223 Thymidylate kinase M3Q_3039 PF02618 YceG-like family M3Q_304 PF02652 L-lactate permease M3Q_3040 PF01063 Amino-transferase class IV M3Q_3043 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_3044 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_3045 PF00005 ABC transporter M3Q_3045 PF12857 TOBE-like domain M3Q_3046 PF03466 LysR substrate binding domain M3Q_3046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3048 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M3Q_3048 PF14602 Hexapeptide repeat of succinyl-transferase M3Q_3048 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_305 PF00392 Bacterial regulatory proteins, gntR family M3Q_305 PF07729 FCD domain M3Q_3050 PF06508 Queuosine biosynthesis protein QueC M3Q_3053 PF00578 AhpC/TSA family M3Q_3055 PF00293 NUDIX domain M3Q_3055 PF01467 Cytidylyltransferase-like M3Q_3056 PF00378 Enoyl-CoA hydratase/isomerase M3Q_3057 PF01784 NIF3 (NGG1p interacting factor 3) M3Q_3059 PF07690 Major Facilitator Superfamily M3Q_306 PF01070 FMN-dependent dehydrogenase M3Q_3060 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M3Q_3060 PF02769 AIR synthase related protein, C-terminal domain M3Q_3060 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M3Q_3061 PF01966 HD domain M3Q_3062 PF07499 RuvA, C-terminal domain M3Q_3062 PF01330 RuvA N terminal domain M3Q_3063 PF17864 RuvB AAA lid domain M3Q_3063 PF05491 RuvB C-terminal winged helix domain M3Q_3063 PF05496 Holliday junction DNA helicase RuvB P-loop domain M3Q_3064 PF01546 Peptidase family M20/M25/M40 M3Q_3064 PF07687 Peptidase dimerisation domain M3Q_3065 PF03061 Thioesterase superfamily M3Q_3066 PF01618 MotA/TolQ/ExbB proton channel family M3Q_3067 PF02472 Biopolymer transport protein ExbD/TolR M3Q_3069 PF04052 TolB amino-terminal domain M3Q_3069 PF07676 WD40-like Beta Propeller Repeat M3Q_307 PF01565 FAD binding domain M3Q_307 PF09330 D-lactate dehydrogenase, membrane binding M3Q_3070 PF00691 OmpA family M3Q_3072 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M3Q_3073 PF00588 SpoU rRNA Methylase family M3Q_3073 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3Q_3079 PF00308 Bacterial dnaA protein M3Q_3079 PF08299 Bacterial dnaA protein helix-turn-helix M3Q_3079 PF11638 DnaA N-terminal domain M3Q_308 PF00155 Aminotransferase class I and II M3Q_3080 PF01594 AI-2E family transporter M3Q_3081 PF02769 AIR synthase related protein, C-terminal domain M3Q_3081 PF00586 AIR synthase related protein, N-terminal domain M3Q_3082 PF00551 Formyl transferase M3Q_3083 PF12697 Alpha/beta hydrolase family M3Q_3084 PF06965 Na+/H+ antiporter 1 M3Q_3084 PF01343 Peptidase family S49 M3Q_3086 PF03772 Competence protein M3Q_3086 PF00753 Metallo-beta-lactamase superfamily M3Q_3086 PF13567 Domain of unknown function (DUF4131) M3Q_3087 PF00005 ABC transporter M3Q_3088 PF02687 FtsX-like permease family M3Q_3088 PF12704 MacB-like periplasmic core domain M3Q_309 PF00392 Bacterial regulatory proteins, gntR family M3Q_309 PF07729 FCD domain M3Q_3090 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M3Q_3093 PF00266 Aminotransferase class-V M3Q_3095 PF13533 Biotin-lipoyl like M3Q_3099 PF00535 Glycosyl transferase family 2 M3Q_3102 PF03989 DNA gyrase C-terminal domain, beta-propeller M3Q_3102 PF00521 DNA gyrase/topoisomerase IV, subunit A M3Q_3103 PF00766 Electron transfer flavoprotein FAD-binding domain M3Q_3103 PF01012 Electron transfer flavoprotein domain M3Q_3104 PF01012 Electron transfer flavoprotein domain M3Q_3105 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_3105 PF00589 Phage integrase family M3Q_3106 PF01810 LysE type translocator M3Q_3107 PF01678 Diaminopimelate epimerase M3Q_3108 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M3Q_3108 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M3Q_311 PF00285 Citrate synthase, C-terminal domain M3Q_3110 PF00324 Amino acid permease M3Q_3111 PF18073 Rubredoxin metal binding domain M3Q_3113 PF00152 tRNA synthetases class II (D, K and N) M3Q_3114 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_3114 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_3114 PF11890 Domain of unknown function (DUF3410) M3Q_3115 PF06803 Protein of unknown function (DUF1232) M3Q_3116 PF02634 FdhD/NarQ family M3Q_3117 PF00384 Molybdopterin oxidoreductase M3Q_3118 PF02595 Glycerate kinase family M3Q_312 PF00694 Aconitase C-terminal domain M3Q_312 PF00330 Aconitase family (aconitate hydratase) M3Q_3121 PF00881 Nitroreductase family M3Q_3126 PF00550 Phosphopantetheine attachment site M3Q_3126 PF00975 Thioesterase domain M3Q_3126 PF13193 AMP-binding enzyme C-terminal domain M3Q_3126 PF00501 AMP-binding enzyme M3Q_3126 PF00668 Condensation domain M3Q_3128 PF01272 Transcription elongation factor, GreA/GreB, C-term M3Q_3128 PF03449 Transcription elongation factor, N-terminal M3Q_3129 PF01464 Transglycosylase SLT domain M3Q_3129 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_3131 PF01171 PP-loop family M3Q_3132 PF01464 Transglycosylase SLT domain M3Q_3133 PF01435 Peptidase family M48 M3Q_3135 PF00873 AcrB/AcrD/AcrF family M3Q_3136 PF03009 Glycerophosphoryl diester phosphodiesterase family M3Q_3138 PF01219 Prokaryotic diacylglycerol kinase M3Q_3139 PF00118 TCP-1/cpn60 chaperonin family M3Q_3140 PF00166 Chaperonin 10 Kd subunit M3Q_3142 PF00149 Calcineurin-like phosphoesterase M3Q_3143 PF00781 Diacylglycerol kinase catalytic domain M3Q_3144 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M3Q_3144 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M3Q_3145 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M3Q_3145 PF01266 FAD dependent oxidoreductase M3Q_3146 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M3Q_3146 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M3Q_3147 PF00083 Sugar (and other) transporter M3Q_3150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M3Q_3150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M3Q_3151 PF09423 PhoD-like phosphatase M3Q_3151 PF16655 PhoD-like phosphatase, N-terminal domain M3Q_3154 PF00809 Pterin binding enzyme M3Q_3155 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_3155 PF17862 AAA+ lid domain M3Q_3155 PF06480 FtsH Extracellular M3Q_3155 PF01434 Peptidase family M41 M3Q_3156 PF01728 FtsJ-like methyltransferase M3Q_3157 PF01985 CRS1 / YhbY (CRM) domain M3Q_3160 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M3Q_3160 PF00117 Glutamine amidotransferase class-I M3Q_3161 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_3161 PF02142 MGS-like domain M3Q_3161 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M3Q_3162 PF03449 Transcription elongation factor, N-terminal M3Q_3162 PF01272 Transcription elongation factor, GreA/GreB, C-term M3Q_3163 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_3164 PF00582 Universal stress protein family M3Q_3165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3Q_3167 PF09587 Bacterial capsule synthesis protein PGA_cap M3Q_3173 PF00589 Phage integrase family M3Q_3173 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_318 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_318 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_3180 PF00999 Sodium/hydrogen exchanger family M3Q_3181 PF04228 Putative neutral zinc metallopeptidase M3Q_3182 PF05661 Protein of unknown function (DUF808) M3Q_3183 PF00579 tRNA synthetases class I (W and Y) M3Q_3184 PF00549 CoA-ligase M3Q_3184 PF02629 CoA binding domain M3Q_3185 PF08442 ATP-grasp domain M3Q_3185 PF00549 CoA-ligase M3Q_3186 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_3186 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3187 PF02817 e3 binding domain M3Q_3187 PF00364 Biotin-requiring enzyme M3Q_3187 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_3188 PF00676 Dehydrogenase E1 component M3Q_3188 PF16870 2-oxoglutarate dehydrogenase C-terminal M3Q_3188 PF02779 Transketolase, pyrimidine binding domain M3Q_3188 PF16078 2-oxoglutarate dehydrogenase N-terminus M3Q_3189 PF13085 2Fe-2S iron-sulfur cluster binding domain M3Q_3190 PF02910 Fumarate reductase flavoprotein C-term M3Q_3190 PF00890 FAD binding domain M3Q_3191 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M3Q_3192 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M3Q_3193 PF00285 Citrate synthase, C-terminal domain M3Q_3199 PF04539 Sigma-70 region 3 M3Q_3199 PF04542 Sigma-70 region 2 M3Q_3199 PF00140 Sigma-70 factor, region 1.2 M3Q_3199 PF03979 Sigma-70 factor, region 1.1 M3Q_3199 PF04546 Sigma-70, non-essential region M3Q_3199 PF04545 Sigma-70, region 4 M3Q_32 PF02028 BCCT, betaine/carnitine/choline family transporter M3Q_320 PF00440 Bacterial regulatory proteins, tetR family M3Q_320 PF08361 MAATS-type transcriptional repressor, C-terminal region M3Q_3200 PF04359 Protein of unknown function (DUF493) M3Q_3201 PF03099 Biotin/lipoate A/B protein ligase family M3Q_3203 PF00465 Iron-containing alcohol dehydrogenase M3Q_3204 PF13520 Amino acid permease M3Q_3205 PF03358 NADPH-dependent FMN reductase M3Q_3206 PF01638 HxlR-like helix-turn-helix M3Q_3207 PF00588 SpoU rRNA Methylase family M3Q_3208 PF10414 Sirohaem synthase dimerisation region M3Q_3208 PF14824 Sirohaem biosynthesis protein central M3Q_3208 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M3Q_3209 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3Q_3209 PF02403 Seryl-tRNA synthetase N-terminal domain M3Q_3211 PF03548 Outer membrane lipoprotein carrier protein LolA M3Q_3212 PF01016 Ribosomal L27 protein M3Q_3213 PF00829 Ribosomal prokaryotic L21 protein M3Q_3214 PF00348 Polyprenyl synthetase M3Q_3216 PF01569 PAP2 superfamily M3Q_3217 PF00529 HlyD membrane-fusion protein of T1SS M3Q_3217 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_3218 PF00873 AcrB/AcrD/AcrF family M3Q_3219 PF02321 Outer membrane efflux protein M3Q_3220 PF01906 Putative heavy-metal-binding M3Q_3221 PF01906 Putative heavy-metal-binding M3Q_3225 PF08264 Anticodon-binding domain of tRNA M3Q_3225 PF10458 Valyl tRNA synthetase tRNA binding arm M3Q_3225 PF00133 tRNA synthetases class I (I, L, M and V) M3Q_3229 PF03466 LysR substrate binding domain M3Q_3229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_323 PF00849 RNA pseudouridylate synthase M3Q_3230 PF00909 Ammonium Transporter Family M3Q_3232 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3232 PF08521 Two-component sensor kinase N-terminal M3Q_3232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3233 PF00072 Response regulator receiver domain M3Q_3233 PF00486 Transcriptional regulatory protein, C terminal M3Q_3234 PF00884 Sulfatase M3Q_3234 PF08019 Phosphoethanolamine transferase EptA/EptB M3Q_3238 PF01734 Patatin-like phospholipase M3Q_3240 PF01145 SPFH domain / Band 7 family M3Q_3241 PF04237 YjbR M3Q_3242 PF00348 Polyprenyl synthetase M3Q_3243 PF04303 PrpF protein M3Q_3244 PF00324 Amino acid permease M3Q_3245 PF01965 DJ-1/PfpI family M3Q_3246 PF16197 Ketoacyl-synthetase C-terminal extension M3Q_3246 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_3246 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_3246 PF08659 KR domain M3Q_3246 PF00550 Phosphopantetheine attachment site M3Q_3246 PF14765 Polyketide synthase dehydratase M3Q_3246 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_3246 PF00698 Acyl transferase domain M3Q_3246 PF08990 Erythronolide synthase docking M3Q_3246 PF09277 Erythronolide synthase, docking M3Q_3247 PF12833 Helix-turn-helix domain M3Q_3247 PF06719 AraC-type transcriptional regulator N-terminus M3Q_3248 PF02673 Bacitracin resistance protein BacA M3Q_3252 PF02525 Flavodoxin-like fold M3Q_3255 PF01507 Phosphoadenosine phosphosulfate reductase family M3Q_3256 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M3Q_3256 PF06974 Protein of unknown function (DUF1298) M3Q_3258 PF00575 S1 RNA binding domain M3Q_3258 PF10150 Ribonuclease E/G family M3Q_3259 PF02545 Maf-like protein M3Q_326 PF07715 TonB-dependent Receptor Plug Domain M3Q_326 PF00593 TonB dependent receptor M3Q_3260 PF04093 rod shape-determining protein MreD M3Q_3261 PF04085 rod shape-determining protein MreC M3Q_3263 PF02686 Glu-tRNAGln amidotransferase C subunit M3Q_3264 PF01425 Amidase M3Q_3265 PF02934 GatB/GatE catalytic domain M3Q_3265 PF02637 GatB domain M3Q_3271 PF05992 SbmA/BacA-like family M3Q_3272 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_3272 PF13291 ACT domain M3Q_3273 PF01734 Patatin-like phospholipase M3Q_3274 PF01235 Sodium:alanine symporter family M3Q_3276 PF00881 Nitroreductase family M3Q_3277 PF07690 Major Facilitator Superfamily M3Q_3278 PF12805 FUSC-like inner membrane protein yccS M3Q_328 PF01037 Lrp/AsnC ligand binding domain M3Q_3280 PF00175 Oxidoreductase NAD-binding domain M3Q_3280 PF00258 Flavodoxin M3Q_3280 PF00667 FAD binding domain M3Q_3282 PF03734 L,D-transpeptidase catalytic domain M3Q_3282 PF17969 L,D-transpeptidase C-terminal domain M3Q_3283 PF04304 Protein of unknown function (DUF454) M3Q_3285 PF08085 Entericidin EcnA/B family M3Q_3286 PF07687 Peptidase dimerisation domain M3Q_3286 PF01546 Peptidase family M20/M25/M40 M3Q_3288 PF01584 CheW-like domain M3Q_3288 PF00072 Response regulator receiver domain M3Q_3288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3288 PF01627 Hpt domain M3Q_3289 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M3Q_3289 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M3Q_329 PF01266 FAD dependent oxidoreductase M3Q_3290 PF01584 CheW-like domain M3Q_3291 PF00072 Response regulator receiver domain M3Q_3292 PF00072 Response regulator receiver domain M3Q_3295 PF00873 AcrB/AcrD/AcrF family M3Q_3296 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3Q_3296 PF04073 Aminoacyl-tRNA editing domain M3Q_3296 PF03129 Anticodon binding domain M3Q_3297 PF07411 Domain of unknown function (DUF1508) M3Q_3298 PF08274 PhnA Zinc-Ribbon M3Q_3298 PF03831 PhnA domain M3Q_3299 PF04343 Protein of unknown function, DUF488 M3Q_330 PF00842 Alanine racemase, C-terminal domain M3Q_330 PF01168 Alanine racemase, N-terminal domain M3Q_3301 PF01571 Aminomethyltransferase folate-binding domain M3Q_3302 PF10411 Disulfide bond isomerase protein N-terminus M3Q_3302 PF13098 Thioredoxin-like domain M3Q_3305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_3306 PF00593 TonB dependent receptor M3Q_3306 PF07715 TonB-dependent Receptor Plug Domain M3Q_3308 PF04228 Putative neutral zinc metallopeptidase M3Q_3309 PF05661 Protein of unknown function (DUF808) M3Q_331 PF01042 Endoribonuclease L-PSP M3Q_3310 PF00579 tRNA synthetases class I (W and Y) M3Q_3311 PF00549 CoA-ligase M3Q_3311 PF02629 CoA binding domain M3Q_3312 PF08442 ATP-grasp domain M3Q_3312 PF00549 CoA-ligase M3Q_3313 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_3313 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3314 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_3314 PF00364 Biotin-requiring enzyme M3Q_3314 PF02817 e3 binding domain M3Q_3316 PF02245 Methylpurine-DNA glycosylase (MPG) M3Q_3317 PF06827 Zinc finger found in FPG and IleRS M3Q_3317 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M3Q_3317 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M3Q_332 PF00324 Amino acid permease M3Q_3320 PF01741 Large-conductance mechanosensitive channel, MscL M3Q_3322 PF00860 Permease family M3Q_3323 PF05175 Methyltransferase small domain M3Q_3323 PF08468 Methyltransferase small domain N-terminal M3Q_3324 PF00324 Amino acid permease M3Q_3325 PF01139 tRNA-splicing ligase RtcB M3Q_3327 PF00691 OmpA family M3Q_3327 PF13505 Outer membrane protein beta-barrel domain M3Q_3329 PF00108 Thiolase, N-terminal domain M3Q_3329 PF02803 Thiolase, C-terminal domain M3Q_333 PF00324 Amino acid permease M3Q_3331 PF00893 Small Multidrug Resistance protein M3Q_3333 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M3Q_3333 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M3Q_3334 PF01011 PQQ enzyme repeat M3Q_3335 PF04966 Carbohydrate-selective porin, OprB family M3Q_3336 PF02515 CoA-transferase family III M3Q_3337 PF02311 AraC-like ligand binding domain M3Q_3337 PF12833 Helix-turn-helix domain M3Q_3338 PF02803 Thiolase, C-terminal domain M3Q_3338 PF00108 Thiolase, N-terminal domain M3Q_3339 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_3339 PF00378 Enoyl-CoA hydratase/isomerase M3Q_3339 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_3345 PF03006 Haemolysin-III related M3Q_3346 PF00083 Sugar (and other) transporter M3Q_3346 PF07690 Major Facilitator Superfamily M3Q_3348 PF07516 SecA Wing and Scaffold domain M3Q_3348 PF02810 SEC-C motif M3Q_3348 PF07517 SecA DEAD-like domain M3Q_3348 PF01043 SecA preprotein cross-linking domain M3Q_3349 PF10417 C-terminal domain of 1-Cys peroxiredoxin M3Q_3349 PF00578 AhpC/TSA family M3Q_335 PF00171 Aldehyde dehydrogenase family M3Q_3350 PF00753 Metallo-beta-lactamase superfamily M3Q_3353 PF02875 Mur ligase family, glutamate ligase domain M3Q_3353 PF08245 Mur ligase middle domain M3Q_3354 PF01039 Carboxyl transferase domain M3Q_3355 PF00290 Tryptophan synthase alpha chain M3Q_336 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M3Q_336 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M3Q_3360 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_3361 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M3Q_3362 PF07715 TonB-dependent Receptor Plug Domain M3Q_3362 PF00593 TonB dependent receptor M3Q_3363 PF01923 Cobalamin adenosyltransferase M3Q_3367 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M3Q_3368 PF00072 Response regulator receiver domain M3Q_3368 PF00486 Transcriptional regulatory protein, C terminal M3Q_3369 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3369 PF00672 HAMP domain M3Q_337 PF13193 AMP-binding enzyme C-terminal domain M3Q_337 PF00501 AMP-binding enzyme M3Q_3371 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3371 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3371 PF12806 Acetyl-CoA dehydrogenase C-terminal like M3Q_3371 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3372 PF12806 Acetyl-CoA dehydrogenase C-terminal like M3Q_3372 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3372 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3372 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3373 PF03466 LysR substrate binding domain M3Q_3374 PF00043 Glutathione S-transferase, C-terminal domain M3Q_3374 PF02798 Glutathione S-transferase, N-terminal domain M3Q_3375 PF06146 Phosphate-starvation-inducible E M3Q_3379 PF07715 TonB-dependent Receptor Plug Domain M3Q_3379 PF00593 TonB dependent receptor M3Q_338 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_338 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_338 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3381 PF02938 GAD domain M3Q_3381 PF01336 OB-fold nucleic acid binding domain M3Q_3381 PF00152 tRNA synthetases class II (D, K and N) M3Q_3382 PF17101 Stealth protein CR1, conserved region 1 M3Q_3382 PF17102 Stealth protein CR3, conserved region 3 M3Q_3382 PF11380 Stealth protein CR2, conserved region 2 M3Q_3387 PF13439 Glycosyltransferase Family 4 M3Q_3387 PF00534 Glycosyl transferases group 1 M3Q_3388 PF00535 Glycosyl transferase family 2 M3Q_3389 PF01522 Polysaccharide deacetylase M3Q_339 PF00378 Enoyl-CoA hydratase/isomerase M3Q_3392 PF01063 Amino-transferase class IV M3Q_3393 PF08335 GlnD PII-uridylyltransferase M3Q_3393 PF03710 Glutamate-ammonia ligase adenylyltransferase M3Q_3394 PF07689 KaiB domain M3Q_3394 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3395 PF02547 Queuosine biosynthesis protein M3Q_3398 PF01702 Queuine tRNA-ribosyltransferase M3Q_3399 PF02699 Preprotein translocase subunit M3Q_34 PF00474 Sodium:solute symporter family M3Q_340 PF00378 Enoyl-CoA hydratase/isomerase M3Q_3400 PF13721 SecD export protein N-terminal TM region M3Q_3400 PF07549 SecD/SecF GG Motif M3Q_3400 PF02355 Protein export membrane protein M3Q_3401 PF02355 Protein export membrane protein M3Q_3401 PF07549 SecD/SecF GG Motif M3Q_3402 PF04127 DNA / pantothenate metabolism flavoprotein M3Q_3402 PF02441 Flavoprotein M3Q_3403 PF04002 RadC-like JAB domain M3Q_3404 PF01062 Bestrophin, RFP-TM, chloride channel M3Q_3405 PF02811 PHP domain M3Q_3406 PF04279 Intracellular septation protein A M3Q_3407 PF03795 YCII-related domain M3Q_3409 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M3Q_3409 PF01266 FAD dependent oxidoreductase M3Q_341 PF07690 Major Facilitator Superfamily M3Q_341 PF00083 Sugar (and other) transporter M3Q_3411 PF04461 Protein of unknown function (DUF520) M3Q_3413 PF03061 Thioesterase superfamily M3Q_3414 PF00085 Thioredoxin M3Q_3415 PF00561 alpha/beta hydrolase fold M3Q_3416 PF00753 Metallo-beta-lactamase superfamily M3Q_3416 PF04273 Putative phosphatase (DUF442) M3Q_3418 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3418 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_342 PF00765 Autoinducer synthase M3Q_3420 PF00990 Diguanylate cyclase, GGDEF domain M3Q_3420 PF17152 Periplasmic sensor domain M3Q_3421 PF01389 OmpA-like transmembrane domain M3Q_3421 PF00691 OmpA family M3Q_3422 PF00149 Calcineurin-like phosphoesterase M3Q_3422 PF10518 TAT (twin-arginine translocation) pathway signal sequence M3Q_3423 PF13091 PLD-like domain M3Q_3425 PF16360 GTP-binding GTPase Middle Region M3Q_3425 PF01926 50S ribosome-binding GTPase M3Q_3425 PF13167 GTP-binding GTPase N-terminal M3Q_3429 PF00149 Calcineurin-like phosphoesterase M3Q_3430 PF00398 Ribosomal RNA adenine dimethylase M3Q_3431 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M3Q_3432 PF00572 Ribosomal protein L13 M3Q_3433 PF00380 Ribosomal protein S9/S16 M3Q_3434 PF13417 Glutathione S-transferase, N-terminal domain M3Q_3434 PF00043 Glutathione S-transferase, C-terminal domain M3Q_3435 PF04386 Stringent starvation protein B M3Q_3437 PF00364 Biotin-requiring enzyme M3Q_3437 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_3437 PF02785 Biotin carboxylase C-terminal domain M3Q_3437 PF00289 Biotin carboxylase, N-terminal domain M3Q_3439 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3439 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3439 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_344 PF03472 Autoinducer binding domain M3Q_344 PF00196 Bacterial regulatory proteins, luxR family M3Q_3440 PF01039 Carboxyl transferase domain M3Q_3443 PF17932 Tetracyclin repressor-like, C-terminal domain M3Q_3443 PF00440 Bacterial regulatory proteins, tetR family M3Q_3444 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3444 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3444 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3448 PF01066 CDP-alcohol phosphatidyltransferase M3Q_3449 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M3Q_345 PF00501 AMP-binding enzyme M3Q_3453 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M3Q_3453 PF00056 lactate/malate dehydrogenase, NAD binding domain M3Q_3455 PF01464 Transglycosylase SLT domain M3Q_3455 PF01551 Peptidase family M23 M3Q_3455 PF10145 Phage-related minor tail protein M3Q_3456 PF00919 Uncharacterized protein family UPF0004 M3Q_3456 PF01938 TRAM domain M3Q_3456 PF04055 Radical SAM superfamily M3Q_3457 PF02562 PhoH-like protein M3Q_3458 PF02130 Uncharacterized protein family UPF0054 M3Q_346 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_346 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_346 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3463 PF03358 NADPH-dependent FMN reductase M3Q_3464 PF03631 Virulence factor BrkB M3Q_3465 PF00892 EamA-like transporter family M3Q_3466 PF12833 Helix-turn-helix domain M3Q_3467 PF01557 Fumarylacetoacetate (FAA) hydrolase family M3Q_347 PF00975 Thioesterase domain M3Q_347 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_347 PF14765 Polyketide synthase dehydratase M3Q_347 PF16197 Ketoacyl-synthetase C-terminal extension M3Q_347 PF00550 Phosphopantetheine attachment site M3Q_347 PF08242 Methyltransferase domain M3Q_347 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_3472 PF00575 S1 RNA binding domain M3Q_3472 PF00773 RNB domain M3Q_3472 PF08206 Ribonuclease B OB domain M3Q_3472 PF08461 Ribonuclease R winged-helix domain M3Q_3472 PF17876 Cold shock domain M3Q_3473 PF01432 Peptidase family M3 M3Q_3474 PF09526 Probable metal-binding protein (DUF2387) M3Q_348 PF00501 AMP-binding enzyme M3Q_348 PF13193 AMP-binding enzyme C-terminal domain M3Q_348 PF00668 Condensation domain M3Q_348 PF00550 Phosphopantetheine attachment site M3Q_348 PF07993 Male sterility protein M3Q_3481 PF03937 Flavinator of succinate dehydrogenase M3Q_3482 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3482 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3482 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3483 PF00743 Flavin-binding monooxygenase-like M3Q_3484 PF01196 Ribosomal protein L17 M3Q_3485 PF01000 RNA polymerase Rpb3/RpoA insert domain M3Q_3485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M3Q_3485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M3Q_3486 PF00163 Ribosomal protein S4/S9 N-terminal domain M3Q_3486 PF01479 S4 domain M3Q_3487 PF00411 Ribosomal protein S11 M3Q_3488 PF00416 Ribosomal protein S13/S18 M3Q_3489 PF00444 Ribosomal protein L36 M3Q_349 PF00975 Thioesterase domain M3Q_349 PF00550 Phosphopantetheine attachment site M3Q_349 PF00501 AMP-binding enzyme M3Q_349 PF00668 Condensation domain M3Q_349 PF13193 AMP-binding enzyme C-terminal domain M3Q_3490 PF00344 SecY translocase M3Q_3491 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M3Q_3492 PF00327 Ribosomal protein L30p/L7e M3Q_3493 PF00333 Ribosomal protein S5, N-terminal domain M3Q_3493 PF03719 Ribosomal protein S5, C-terminal domain M3Q_3494 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M3Q_3495 PF00347 Ribosomal protein L6 M3Q_3496 PF00410 Ribosomal protein S8 M3Q_3497 PF00253 Ribosomal protein S14p/S29e M3Q_3498 PF00281 Ribosomal protein L5 M3Q_3498 PF00673 ribosomal L5P family C-terminus M3Q_3499 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M3Q_3499 PF00467 KOW motif M3Q_35 PF04341 Protein of unknown function, DUF485 M3Q_3500 PF00238 Ribosomal protein L14p/L23e M3Q_3501 PF00366 Ribosomal protein S17 M3Q_3502 PF00831 Ribosomal L29 protein M3Q_3503 PF00252 Ribosomal protein L16p/L10e M3Q_3504 PF07650 KH domain M3Q_3504 PF00189 Ribosomal protein S3, C-terminal domain M3Q_3505 PF00237 Ribosomal protein L22p/L17e M3Q_3506 PF00203 Ribosomal protein S19 M3Q_3507 PF03947 Ribosomal Proteins L2, C-terminal domain M3Q_3507 PF00181 Ribosomal Proteins L2, RNA binding domain M3Q_3508 PF00276 Ribosomal protein L23 M3Q_3509 PF00573 Ribosomal protein L4/L1 family M3Q_3510 PF00297 Ribosomal protein L3 M3Q_3511 PF00338 Ribosomal protein S10p/S20e M3Q_3512 PF00117 Glutamine amidotransferase class-I M3Q_3513 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_3514 PF05872 Bacterial protein of unknown function (DUF853) M3Q_3515 PF00175 Oxidoreductase NAD-binding domain M3Q_3515 PF00970 Oxidoreductase FAD-binding domain M3Q_3515 PF00042 Globin M3Q_3516 PF02082 Transcriptional regulator M3Q_3517 PF01926 50S ribosome-binding GTPase M3Q_3519 PF00375 Sodium:dicarboxylate symporter family M3Q_352 PF12697 Alpha/beta hydrolase family M3Q_3521 PF01553 Acyltransferase M3Q_3524 PF17191 RecG wedge domain M3Q_3524 PF00271 Helicase conserved C-terminal domain M3Q_3524 PF00270 DEAD/DEAH box helicase M3Q_3525 PF00156 Phosphoribosyl transferase domain M3Q_3527 PF03641 Possible lysine decarboxylase M3Q_3528 PF01544 CorA-like Mg2+ transporter protein M3Q_353 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_3530 PF05494 MlaC protein M3Q_3532 PF02405 Permease MlaE M3Q_3533 PF00005 ABC transporter M3Q_3534 PF00271 Helicase conserved C-terminal domain M3Q_3534 PF03880 DbpA RNA binding domain M3Q_3534 PF00270 DEAD/DEAH box helicase M3Q_3534 PF12343 Cold shock protein DEAD box A M3Q_3535 PF00459 Inositol monophosphatase family M3Q_3536 PF02780 Transketolase, C-terminal domain M3Q_3536 PF02779 Transketolase, pyrimidine binding domain M3Q_3536 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M3Q_3537 PF00925 GTP cyclohydrolase II M3Q_3538 PF01218 Coproporphyrinogen III oxidase M3Q_3539 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M3Q_3539 PF01488 Shikimate / quinate 5-dehydrogenase M3Q_3539 PF08501 Shikimate dehydrogenase substrate binding domain M3Q_354 PF01722 BolA-like protein M3Q_3541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3541 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3541 PF12806 Acetyl-CoA dehydrogenase C-terminal like M3Q_3543 PF04024 PspC domain M3Q_3544 PF00571 CBS domain M3Q_3549 PF02091 Glycyl-tRNA synthetase alpha subunit M3Q_3550 PF05746 DALR anticodon binding domain M3Q_3550 PF02092 Glycyl-tRNA synthetase beta subunit M3Q_3552 PF00892 EamA-like transporter family M3Q_3553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3553 PF03466 LysR substrate binding domain M3Q_3559 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M3Q_3560 PF04996 Succinylarginine dihydrolase M3Q_3561 PF00171 Aldehyde dehydrogenase family M3Q_3562 PF04958 Arginine N-succinyltransferase beta subunit M3Q_3563 PF00202 Aminotransferase class-III M3Q_3564 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M3Q_3564 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3Q_3565 PF00324 Amino acid permease M3Q_357 PF04286 Protein of unknown function (DUF445) M3Q_357 PF04286 Protein of unknown function (DUF445) M3Q_3572 PF01594 AI-2E family transporter M3Q_3573 PF00080 Copper/zinc superoxide dismutase (SODC) M3Q_3574 PF12805 FUSC-like inner membrane protein yccS M3Q_3575 PF07690 Major Facilitator Superfamily M3Q_3577 PF02525 Flavodoxin-like fold M3Q_3578 PF03992 Antibiotic biosynthesis monooxygenase M3Q_358 PF07681 DoxX M3Q_3580 PF01565 FAD binding domain M3Q_3580 PF02913 FAD linked oxidases, C-terminal domain M3Q_3581 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_3581 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_3582 PF00892 EamA-like transporter family M3Q_3583 PF00892 EamA-like transporter family M3Q_3585 PF01925 Sulfite exporter TauE/SafE M3Q_3586 PF01509 TruB family pseudouridylate synthase (N terminal domain) M3Q_3586 PF09157 Pseudouridine synthase II TruB, C-terminal M3Q_3586 PF16198 tRNA pseudouridylate synthase B C-terminal domain M3Q_3587 PF03280 Proteobacterial lipase chaperone protein M3Q_3588 PF00561 alpha/beta hydrolase fold M3Q_3589 PF01245 Ribosomal protein L19 M3Q_359 PF09335 SNARE associated Golgi protein M3Q_3590 PF01746 tRNA (Guanine-1)-methyltransferase M3Q_3591 PF05239 PRC-barrel domain M3Q_3591 PF01782 RimM N-terminal domain M3Q_3592 PF00886 Ribosomal protein S16 M3Q_36 PF00672 HAMP domain M3Q_36 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_36 PF00512 His Kinase A (phospho-acceptor) domain M3Q_36 PF01627 Hpt domain M3Q_36 PF00072 Response regulator receiver domain M3Q_3600 PF02401 LytB protein M3Q_3601 PF00625 Guanylate kinase M3Q_3602 PF01192 RNA polymerase Rpb6 M3Q_3603 PF04607 Region found in RelA / SpoT proteins M3Q_3603 PF02824 TGS domain M3Q_3603 PF13291 ACT domain M3Q_3604 PF01042 Endoribonuclease L-PSP M3Q_3605 PF04324 BFD-like [2Fe-2S] binding domain M3Q_3606 PF00210 Ferritin-like domain M3Q_3607 PF04932 O-Antigen ligase M3Q_3607 PF11846 Virulence factor membrane-bound polymerase, C-terminal M3Q_3607 PF15864 Protein glycosylation ligase M3Q_3609 PF00114 Pilin (bacterial filament) M3Q_3609 PF07963 Prokaryotic N-terminal methylation motif M3Q_3611 PF04536 TPM domain M3Q_3612 PF04011 LemA family M3Q_3614 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3614 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M3Q_3615 PF00310 Glutamine amidotransferases class-II M3Q_3615 PF01645 Conserved region in glutamate synthase M3Q_3615 PF01493 GXGXG motif M3Q_3615 PF04898 Glutamate synthase central domain M3Q_3617 PF01761 3-dehydroquinate synthase M3Q_3618 PF01202 Shikimate kinase M3Q_3619 PF07660 Secretin and TonB N terminus short domain M3Q_3619 PF03958 Bacterial type II/III secretion system short domain M3Q_3619 PF00263 Bacterial type II and III secretion system protein M3Q_3619 PF11741 AMIN domain M3Q_362 PF13614 AAA domain M3Q_3624 PF17092 Penicillin-binding protein OB-like domain M3Q_3624 PF00905 Penicillin binding protein transpeptidase domain M3Q_3624 PF00912 Transglycosylase M3Q_3625 PF13847 Methyltransferase domain M3Q_3627 PF00953 Glycosyl transferase family 4 M3Q_3628 PF01225 Mur ligase family, catalytic domain M3Q_3628 PF02875 Mur ligase family, glutamate ligase domain M3Q_3628 PF08245 Mur ligase middle domain M3Q_3629 PF01225 Mur ligase family, catalytic domain M3Q_3629 PF08245 Mur ligase middle domain M3Q_3629 PF02875 Mur ligase family, glutamate ligase domain M3Q_3630 PF03717 Penicillin-binding Protein dimerisation domain M3Q_3630 PF00905 Penicillin binding protein transpeptidase domain M3Q_3632 PF01795 MraW methylase family M3Q_3635 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3Q_3636 PF00324 Amino acid permease M3Q_364 PF01722 BolA-like protein M3Q_3640 PF01545 Cation efflux family M3Q_3641 PF00873 AcrB/AcrD/AcrF family M3Q_3642 PF00529 HlyD membrane-fusion protein of T1SS M3Q_3642 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_3645 PF04191 Phospholipid methyltransferase M3Q_365 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_3650 PF12848 ABC transporter M3Q_3650 PF00005 ABC transporter M3Q_3651 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_3652 PF00106 short chain dehydrogenase M3Q_3653 PF01740 STAS domain M3Q_3653 PF00916 Sulfate permease family M3Q_3654 PF16921 Tex protein YqgF-like domain M3Q_3654 PF17674 HHH domain M3Q_3654 PF09371 Tex-like protein N-terminal domain M3Q_3654 PF00575 S1 RNA binding domain M3Q_3657 PF00005 ABC transporter M3Q_3657 PF12848 ABC transporter M3Q_3658 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_3659 PF00106 short chain dehydrogenase M3Q_366 PF12697 Alpha/beta hydrolase family M3Q_3660 PF01740 STAS domain M3Q_3660 PF00916 Sulfate permease family M3Q_3661 PF00575 S1 RNA binding domain M3Q_3661 PF09371 Tex-like protein N-terminal domain M3Q_3661 PF16921 Tex protein YqgF-like domain M3Q_3661 PF17674 HHH domain M3Q_3662 PF00486 Transcriptional regulatory protein, C terminal M3Q_3662 PF00072 Response regulator receiver domain M3Q_3663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3663 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3663 PF00672 HAMP domain M3Q_3664 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M3Q_3664 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M3Q_3665 PF00583 Acetyltransferase (GNAT) family M3Q_3667 PF00475 Imidazoleglycerol-phosphate dehydratase M3Q_3668 PF00117 Glutamine amidotransferase class-I M3Q_3671 PF00977 Histidine biosynthesis protein M3Q_3674 PF03992 Antibiotic biosynthesis monooxygenase M3Q_3677 PF01636 Phosphotransferase enzyme family M3Q_3678 PF00977 Histidine biosynthesis protein M3Q_3681 PF00230 Major intrinsic protein M3Q_3686 PF02705 K+ potassium transporter M3Q_3689 PF02525 Flavodoxin-like fold M3Q_369 PF00975 Thioesterase domain M3Q_369 PF00550 Phosphopantetheine attachment site M3Q_369 PF00668 Condensation domain M3Q_369 PF13193 AMP-binding enzyme C-terminal domain M3Q_369 PF00501 AMP-binding enzyme M3Q_3690 PF01638 HxlR-like helix-turn-helix M3Q_3695 PF12833 Helix-turn-helix domain M3Q_3695 PF02311 AraC-like ligand binding domain M3Q_3696 PF00248 Aldo/keto reductase family M3Q_370 PF00550 Phosphopantetheine attachment site M3Q_370 PF07993 Male sterility protein M3Q_370 PF00668 Condensation domain M3Q_370 PF00501 AMP-binding enzyme M3Q_370 PF13193 AMP-binding enzyme C-terminal domain M3Q_371 PF00950 ABC 3 transport family M3Q_372 PF00005 ABC transporter M3Q_376 PF00119 ATP synthase A chain M3Q_377 PF00137 ATP synthase subunit C M3Q_378 PF00430 ATP synthase B/B' CF(0) M3Q_379 PF00213 ATP synthase delta (OSCP) subunit M3Q_38 PF00196 Bacterial regulatory proteins, luxR family M3Q_38 PF00072 Response regulator receiver domain M3Q_380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3Q_380 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3Q_380 PF00306 ATP synthase alpha/beta chain, C terminal domain M3Q_381 PF00231 ATP synthase M3Q_382 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3Q_382 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3Q_383 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M3Q_385 PF00255 Glutathione peroxidase M3Q_387 PF07690 Major Facilitator Superfamily M3Q_388 PF00440 Bacterial regulatory proteins, tetR family M3Q_389 PF00892 EamA-like transporter family M3Q_39 PF03358 NADPH-dependent FMN reductase M3Q_390 PF01300 Telomere recombination M3Q_391 PF17782 DprA winged helix domain M3Q_391 PF02481 DNA recombination-mediator protein A M3Q_393 PF01327 Polypeptide deformylase M3Q_398 PF00440 Bacterial regulatory proteins, tetR family M3Q_4 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_4 PF03466 LysR substrate binding domain M3Q_40 PF00296 Luciferase-like monooxygenase M3Q_400 PF00248 Aldo/keto reductase family M3Q_401 PF03466 LysR substrate binding domain M3Q_401 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_403 PF00155 Aminotransferase class I and II M3Q_403 PF00392 Bacterial regulatory proteins, gntR family M3Q_404 PF00107 Zinc-binding dehydrogenase M3Q_404 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_405 PF03352 Methyladenine glycosylase M3Q_408 PF10576 Iron-sulfur binding domain of endonuclease III M3Q_408 PF00633 Helix-hairpin-helix motif M3Q_408 PF00730 HhH-GPD superfamily base excision DNA repair protein M3Q_408 PF14815 NUDIX domain M3Q_41 PF00872 Transposase, Mutator family M3Q_411 PF07043 Protein of unknown function (DUF1328) M3Q_412 PF03692 Putative zinc- or iron-chelating domain M3Q_413 PF07995 Glucose / Sorbosone dehydrogenase M3Q_414 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_414 PF16193 AAA C-terminal domain M3Q_414 PF12002 MgsA AAA+ ATPase C terminal M3Q_415 PF01226 Formate/nitrite transporter M3Q_417 PF01259 SAICAR synthetase M3Q_419 PF00701 Dihydrodipicolinate synthetase family M3Q_42 PF01037 Lrp/AsnC ligand binding domain M3Q_420 PF00857 Isochorismatase family M3Q_421 PF01758 Sodium Bile acid symporter family M3Q_422 PF01554 MatE M3Q_423 PF04463 Protein of unknown function (DUF523) M3Q_424 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_426 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_427 PF02798 Glutathione S-transferase, N-terminal domain M3Q_427 PF14497 Glutathione S-transferase, C-terminal domain M3Q_43 PF00857 Isochorismatase family M3Q_430 PF00521 DNA gyrase/topoisomerase IV, subunit A M3Q_430 PF03989 DNA gyrase C-terminal domain, beta-propeller M3Q_431 PF00501 AMP-binding enzyme M3Q_431 PF13193 AMP-binding enzyme C-terminal domain M3Q_434 PF00719 Inorganic pyrophosphatase M3Q_435 PF03573 outer membrane porin, OprD family M3Q_438 PF00701 Dihydrodipicolinate synthetase family M3Q_44 PF00501 AMP-binding enzyme M3Q_44 PF16177 Acetyl-coenzyme A synthetase N-terminus M3Q_44 PF13193 AMP-binding enzyme C-terminal domain M3Q_440 PF00392 Bacterial regulatory proteins, gntR family M3Q_440 PF00155 Aminotransferase class I and II M3Q_441 PF01078 Magnesium chelatase, subunit ChlI M3Q_441 PF13335 Magnesium chelatase, subunit ChlI C-terminal M3Q_443 PF00665 Integrase core domain M3Q_447 PF00582 Universal stress protein family M3Q_448 PF01740 STAS domain M3Q_448 PF00916 Sulfate permease family M3Q_454 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_454 PF00589 Phage integrase family M3Q_459 PF00665 Integrase core domain M3Q_46 PF00924 Mechanosensitive ion channel M3Q_464 PF00809 Pterin binding enzyme M3Q_465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3Q_465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_467 PF00665 Integrase core domain M3Q_47 PF04452 RNA methyltransferase M3Q_473 PF00582 Universal stress protein family M3Q_474 PF01740 STAS domain M3Q_474 PF00916 Sulfate permease family M3Q_476 PF07690 Major Facilitator Superfamily M3Q_477 PF00440 Bacterial regulatory proteins, tetR family M3Q_477 PF02909 Tetracyclin repressor-like, C-terminal domain M3Q_48 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M3Q_481 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M3Q_482 PF01636 Phosphotransferase enzyme family M3Q_484 PF13335 Magnesium chelatase, subunit ChlI C-terminal M3Q_484 PF01078 Magnesium chelatase, subunit ChlI M3Q_486 PF00543 Nitrogen regulatory protein P-II M3Q_487 PF00909 Ammonium Transporter Family M3Q_488 PF03477 ATP cone domain M3Q_489 PF01872 RibD C-terminal domain M3Q_489 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M3Q_49 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_491 PF00677 Lumazine binding domain M3Q_495 PF00883 Cytosol aminopeptidase family, catalytic domain M3Q_495 PF02789 Cytosol aminopeptidase family, N-terminal domain M3Q_497 PF03739 Lipopolysaccharide export system permease LptF/LptG M3Q_498 PF01676 Metalloenzyme superfamily M3Q_498 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M3Q_499 PF03572 Peptidase family S41 M3Q_499 PF00595 PDZ domain M3Q_5 PF07690 Major Facilitator Superfamily M3Q_500 PF00072 Response regulator receiver domain M3Q_500 PF02954 Bacterial regulatory protein, Fis family M3Q_500 PF00158 Sigma-54 interaction domain M3Q_501 PF00512 His Kinase A (phospho-acceptor) domain M3Q_501 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_502 PF00072 Response regulator receiver domain M3Q_502 PF00196 Bacterial regulatory proteins, luxR family M3Q_503 PF00768 D-alanyl-D-alanine carboxypeptidase M3Q_504 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_505 PF03447 Homoserine dehydrogenase, NAD binding domain M3Q_505 PF01842 ACT domain M3Q_505 PF00742 Homoserine dehydrogenase M3Q_506 PF13098 Thioredoxin-like domain M3Q_506 PF10411 Disulfide bond isomerase protein N-terminus M3Q_507 PF00589 Phage integrase family M3Q_507 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_509 PF07664 Ferrous iron transport protein B C terminus M3Q_509 PF02421 Ferrous iron transport protein B M3Q_509 PF07670 Nucleoside recognition M3Q_511 PF02875 Mur ligase family, glutamate ligase domain M3Q_511 PF08245 Mur ligase middle domain M3Q_512 PF01098 Cell cycle protein M3Q_513 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3Q_514 PF01258 Prokaryotic dksA/traR C4-type zinc finger M3Q_515 PF00149 Calcineurin-like phosphoesterase M3Q_516 PF00293 NUDIX domain M3Q_517 PF01964 Radical SAM ThiC family M3Q_517 PF13667 ThiC-associated domain M3Q_52 PF00472 RF-1 domain M3Q_52 PF03462 PCRF domain M3Q_520 PF00892 EamA-like transporter family M3Q_521 PF02321 Outer membrane efflux protein M3Q_522 PF01895 PhoU domain M3Q_523 PF04362 Bacterial Fe(2+) trafficking M3Q_524 PF00206 Lyase M3Q_524 PF14698 Argininosuccinate lyase C-terminal M3Q_525 PF06580 Histidine kinase M3Q_525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_525 PF07694 5TMR of 5TMR-LYT M3Q_526 PF04397 LytTr DNA-binding domain M3Q_526 PF00072 Response regulator receiver domain M3Q_527 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M3Q_527 PF03900 Porphobilinogen deaminase, C-terminal domain M3Q_532 PF00816 H-NS histone family M3Q_535 PF03958 Bacterial type II/III secretion system short domain M3Q_535 PF00263 Bacterial type II and III secretion system protein M3Q_536 PF12401 Protein of unknown function (DUF2662) M3Q_536 PF00498 FHA domain M3Q_537 PF13419 Haloacid dehalogenase-like hydrolase M3Q_538 PF04715 Anthranilate synthase component I, N terminal region M3Q_538 PF00425 chorismate binding enzyme M3Q_54 PF02272 DHHA1 domain M3Q_54 PF17768 RecJ OB domain M3Q_54 PF01368 DHH family M3Q_540 PF03144 Elongation factor Tu domain 2 M3Q_540 PF03143 Elongation factor Tu C-terminal domain M3Q_540 PF00009 Elongation factor Tu GTP binding domain M3Q_541 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M3Q_542 PF00467 KOW motif M3Q_542 PF02357 Transcription termination factor nusG M3Q_543 PF00298 Ribosomal protein L11, RNA binding domain M3Q_543 PF03946 Ribosomal protein L11, N-terminal domain M3Q_544 PF00687 Ribosomal protein L1p/L10e family M3Q_545 PF00466 Ribosomal protein L10 M3Q_546 PF00542 Ribosomal protein L7/L12 C-terminal domain M3Q_546 PF16320 Ribosomal protein L7/L12 dimerisation domain M3Q_547 PF04561 RNA polymerase Rpb2, domain 2 M3Q_547 PF10385 RNA polymerase beta subunit external 1 domain M3Q_547 PF00562 RNA polymerase Rpb2, domain 6 M3Q_547 PF04560 RNA polymerase Rpb2, domain 7 M3Q_547 PF04563 RNA polymerase beta subunit M3Q_547 PF04565 RNA polymerase Rpb2, domain 3 M3Q_548 PF04997 RNA polymerase Rpb1, domain 1 M3Q_548 PF00623 RNA polymerase Rpb1, domain 2 M3Q_548 PF04983 RNA polymerase Rpb1, domain 3 M3Q_548 PF05000 RNA polymerase Rpb1, domain 4 M3Q_548 PF04998 RNA polymerase Rpb1, domain 5 M3Q_55 PF01243 Pyridoxamine 5'-phosphate oxidase M3Q_55 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M3Q_552 PF00561 alpha/beta hydrolase fold M3Q_553 PF13726 Na+-H+ antiporter family M3Q_553 PF03553 Na+/H+ antiporter family M3Q_556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_556 PF00183 Hsp90 protein M3Q_559 PF01323 DSBA-like thioredoxin domain M3Q_56 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_56 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3Q_56 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_56 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_561 PF00376 MerR family regulatory protein M3Q_561 PF09278 MerR, DNA binding M3Q_565 PF00108 Thiolase, N-terminal domain M3Q_565 PF02803 Thiolase, C-terminal domain M3Q_566 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_566 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_566 PF00378 Enoyl-CoA hydratase/isomerase M3Q_57 PF00571 CBS domain M3Q_57 PF00478 IMP dehydrogenase / GMP reductase domain M3Q_570 PF01541 GIY-YIG catalytic domain M3Q_570 PF02151 UvrB/uvrC motif M3Q_570 PF08459 UvrC Helix-hairpin-helix N-terminal M3Q_572 PF01066 CDP-alcohol phosphatidyltransferase M3Q_573 PF12833 Helix-turn-helix domain M3Q_573 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M3Q_573 PF02805 Metal binding domain of Ada M3Q_573 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3Q_578 PF13533 Biotin-lipoyl like M3Q_579 PF03652 Holliday junction resolvase M3Q_58 PF03692 Putative zinc- or iron-chelating domain M3Q_580 PF02622 Uncharacterized ACR, COG1678 M3Q_581 PF02463 RecF/RecN/SMC N terminal domain M3Q_583 PF06865 Pyrimidine/purine nucleoside phosphorylase M3Q_584 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3Q_584 PF00588 SpoU rRNA Methylase family M3Q_586 PF01121 Dephospho-CoA kinase M3Q_587 PF06750 Bacterial Peptidase A24 N-terminal domain M3Q_587 PF01478 Type IV leader peptidase family M3Q_588 PF00482 Type II secretion system (T2SS), protein F M3Q_589 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M3Q_589 PF00437 Type II/IV secretion system protein M3Q_59 PF01613 Flavin reductase like domain M3Q_59 PF00258 Flavodoxin M3Q_590 PF00121 Triosephosphate isomerase M3Q_591 PF03840 Preprotein translocase SecG subunit M3Q_592 PF17384 RimP C-terminal SH3 domain M3Q_592 PF02576 RimP N-terminal domain M3Q_593 PF13184 NusA-like KH domain M3Q_593 PF08529 NusA N-terminal domain M3Q_593 PF00575 S1 RNA binding domain M3Q_594 PF00009 Elongation factor Tu GTP binding domain M3Q_594 PF11987 Translation-initiation factor 2 M3Q_594 PF08364 Bacterial translation initiation factor IF-2 associated region M3Q_594 PF04760 Translation initiation factor IF-2, N-terminal region M3Q_595 PF02033 Ribosome-binding factor A M3Q_597 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M3Q_599 PF00361 Proton-conducting membrane transporter M3Q_60 PF00593 TonB dependent receptor M3Q_60 PF07715 TonB-dependent Receptor Plug Domain M3Q_600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M3Q_601 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M3Q_601 PF00361 Proton-conducting membrane transporter M3Q_601 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M3Q_601 PF13244 Domain of unknown function (DUF4040) M3Q_604 PF01502 Phosphoribosyl-AMP cyclohydrolase M3Q_605 PF01494 FAD binding domain M3Q_606 PF03109 ABC1 family M3Q_608 PF01209 ubiE/COQ5 methyltransferase family M3Q_61 PF01169 Uncharacterized protein family UPF0016 M3Q_610 PF03976 Polyphosphate kinase 2 (PPK2) M3Q_612 PF17946 RecC C-terminal domain M3Q_613 PF13361 UvrD-like helicase C-terminal domain M3Q_613 PF12705 PD-(D/E)XK nuclease superfamily M3Q_613 PF00580 UvrD/REP helicase N-terminal domain M3Q_614 PF13538 UvrD-like helicase C-terminal domain M3Q_616 PF00312 Ribosomal protein S15 M3Q_617 PF00013 KH domain M3Q_617 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M3Q_617 PF01138 3' exoribonuclease family, domain 1 M3Q_617 PF03725 3' exoribonuclease family, domain 2 M3Q_617 PF00575 S1 RNA binding domain M3Q_618 PF01544 CorA-like Mg2+ transporter protein M3Q_620 PF00226 DnaJ domain M3Q_620 PF01556 DnaJ C terminal domain M3Q_622 PF01430 Hsp33 protein M3Q_623 PF02254 TrkA-N domain M3Q_623 PF00999 Sodium/hydrogen exchanger family M3Q_624 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M3Q_624 PF18074 Primosomal protein N C-terminal domain M3Q_624 PF17764 3′ DNA-binding domain (3′BD) M3Q_624 PF00271 Helicase conserved C-terminal domain M3Q_624 PF00270 DEAD/DEAH box helicase M3Q_625 PF00482 Type II secretion system (T2SS), protein F M3Q_626 PF08334 Type II secretion system (T2SS), protein G M3Q_626 PF07963 Prokaryotic N-terminal methylation motif M3Q_628 PF01588 Putative tRNA binding domain M3Q_629 PF00795 Carbon-nitrogen hydrolase M3Q_63 PF02817 e3 binding domain M3Q_63 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_63 PF00364 Biotin-requiring enzyme M3Q_630 PF03471 Transporter associated domain M3Q_630 PF00571 CBS domain M3Q_631 PF01206 Sulfurtransferase TusA M3Q_634 PF01177 Asp/Glu/Hydantoin racemase M3Q_636 PF00762 Ferrochelatase M3Q_637 PF00753 Metallo-beta-lactamase superfamily M3Q_638 PF03884 DNA gyrase inhibitor YacG M3Q_64 PF00456 Transketolase, thiamine diphosphate binding domain M3Q_64 PF17831 Pyruvate dehydrogenase E1 component middle domain M3Q_642 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M3Q_644 PF01197 Ribosomal protein L31 M3Q_645 PF03109 ABC1 family M3Q_646 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_646 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_647 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_647 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_647 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_648 PF01554 MatE M3Q_65 PF01551 Peptidase family M23 M3Q_650 PF04055 Radical SAM superfamily M3Q_650 PF06969 HemN C-terminal domain M3Q_651 PF00106 short chain dehydrogenase M3Q_652 PF03466 LysR substrate binding domain M3Q_652 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_653 PF00501 AMP-binding enzyme M3Q_653 PF13193 AMP-binding enzyme C-terminal domain M3Q_654 PF12111 Polyribonucleotide phosphorylase C terminal M3Q_654 PF00575 S1 RNA binding domain M3Q_654 PF10150 Ribonuclease E/G family M3Q_655 PF00849 RNA pseudouridylate synthase M3Q_655 PF01479 S4 domain M3Q_656 PF13419 Haloacid dehalogenase-like hydrolase M3Q_657 PF13280 WYL domain M3Q_657 PF08279 HTH domain M3Q_658 PF02798 Glutathione S-transferase, N-terminal domain M3Q_660 PF03466 LysR substrate binding domain M3Q_660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_661 PF12706 Beta-lactamase superfamily domain M3Q_662 PF00141 Peroxidase M3Q_663 PF00391 PEP-utilising enzyme, mobile domain M3Q_663 PF02896 PEP-utilising enzyme, TIM barrel domain M3Q_663 PF01590 GAF domain M3Q_663 PF05524 PEP-utilising enzyme, N-terminal M3Q_664 PF00293 NUDIX domain M3Q_668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_668 PF03466 LysR substrate binding domain M3Q_67 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M3Q_670 PF00330 Aconitase family (aconitate hydratase) M3Q_671 PF00694 Aconitase C-terminal domain M3Q_673 PF00180 Isocitrate/isopropylmalate dehydrogenase M3Q_676 PF01176 Translation initiation factor 1A / IF-1 M3Q_678 PF01416 tRNA pseudouridine synthase M3Q_68 PF12327 FtsZ family, C-terminal domain M3Q_68 PF00091 Tubulin/FtsZ family, GTPase domain M3Q_682 PF01118 Semialdehyde dehydrogenase, NAD binding domain M3Q_682 PF02774 Semialdehyde dehydrogenase, dimerisation domain M3Q_684 PF00375 Sodium:dicarboxylate symporter family M3Q_686 PF03279 Bacterial lipid A biosynthesis acyltransferase M3Q_687 PF01810 LysE type translocator M3Q_69 PF02491 SHS2 domain inserted in FTSA M3Q_690 PF00107 Zinc-binding dehydrogenase M3Q_690 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_691 PF01638 HxlR-like helix-turn-helix M3Q_693 PF08272 Topoisomerase I zinc-ribbon-like M3Q_693 PF01131 DNA topoisomerase M3Q_693 PF01751 Toprim domain M3Q_693 PF01396 Topoisomerase DNA binding C4 zinc finger M3Q_696 PF13361 UvrD-like helicase C-terminal domain M3Q_696 PF00580 UvrD/REP helicase N-terminal domain M3Q_697 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M3Q_70 PF08478 POTRA domain, FtsQ-type M3Q_70 PF03799 Cell division protein FtsQ M3Q_701 PF02254 TrkA-N domain M3Q_701 PF00999 Sodium/hydrogen exchanger family M3Q_702 PF00471 Ribosomal protein L33 M3Q_703 PF00830 Ribosomal L28 family M3Q_704 PF00171 Aldehyde dehydrogenase family M3Q_706 PF00551 Formyl transferase M3Q_706 PF01842 ACT domain M3Q_708 PF01618 MotA/TolQ/ExbB proton channel family M3Q_71 PF07478 D-ala D-ala ligase C-terminus M3Q_71 PF01820 D-ala D-ala ligase N-terminus M3Q_710 PF01625 Peptide methionine sulfoxide reductase M3Q_712 PF00186 Dihydrofolate reductase M3Q_713 PF00303 Thymidylate synthase M3Q_716 PF01790 Prolipoprotein diacylglyceryl transferase M3Q_72 PF01225 Mur ligase family, catalytic domain M3Q_72 PF02875 Mur ligase family, glutamate ligase domain M3Q_72 PF08245 Mur ligase middle domain M3Q_720 PF00902 Sec-independent protein translocase protein (TatC) M3Q_721 PF02416 mttA/Hcf106 family M3Q_722 PF02416 mttA/Hcf106 family M3Q_724 PF01725 Ham1 family M3Q_726 PF00561 alpha/beta hydrolase fold M3Q_726 PF07021 Methionine biosynthesis protein MetW M3Q_727 PF00561 alpha/beta hydrolase fold M3Q_728 PF00682 HMGL-like M3Q_728 PF08502 LeuA allosteric (dimerisation) domain M3Q_729 PF18331 PKHD-type hydroxylase C-terminal domain M3Q_729 PF13640 2OG-Fe(II) oxygenase superfamily M3Q_73 PF04101 Glycosyltransferase family 28 C-terminal domain M3Q_73 PF03033 Glycosyltransferase family 28 N-terminal domain M3Q_730 PF00593 TonB dependent receptor M3Q_730 PF07715 TonB-dependent Receptor Plug Domain M3Q_731 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_731 PF05698 Bacterial trigger factor protein (TF) C-terminus M3Q_731 PF05697 Bacterial trigger factor protein (TF) M3Q_732 PF00574 Clp protease M3Q_733 PF07724 AAA domain (Cdc48 subfamily) M3Q_733 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_733 PF06689 ClpX C4-type zinc finger M3Q_736 PF05683 Fumarase C-terminus M3Q_736 PF05681 Fumarate hydratase (Fumerase) M3Q_737 PF01515 Phosphate acetyl/butaryl transferase M3Q_737 PF07085 DRTGG domain M3Q_738 PF00871 Acetokinase family M3Q_739 PF00920 Dehydratase family M3Q_74 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M3Q_74 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M3Q_740 PF01081 KDPG and KHG aldolase M3Q_741 PF02447 GntP family permease M3Q_742 PF01202 Shikimate kinase M3Q_743 PF00171 Aldehyde dehydrogenase family M3Q_744 PF00171 Aldehyde dehydrogenase family M3Q_745 PF00561 alpha/beta hydrolase fold M3Q_747 PF00933 Glycosyl hydrolase family 3 N terminal domain M3Q_748 PF00595 PDZ domain M3Q_748 PF17804 Tail specific protease N-terminal domain M3Q_748 PF03572 Peptidase family S41 M3Q_748 PF11818 C-terminal domain of tail specific protease (DUF3340) M3Q_749 PF00534 Glycosyl transferases group 1 M3Q_749 PF13439 Glycosyltransferase Family 4 M3Q_750 PF01569 PAP2 superfamily M3Q_751 PF04384 Iron-sulphur cluster assembly M3Q_752 PF00334 Nucleoside diphosphate kinase M3Q_753 PF04055 Radical SAM superfamily M3Q_755 PF13464 Domain of unknown function (DUF4115) M3Q_756 PF04551 GcpE protein M3Q_757 PF03129 Anticodon binding domain M3Q_757 PF13393 Histidyl-tRNA synthetase M3Q_759 PF13360 PQQ-like domain M3Q_76 PF07715 TonB-dependent Receptor Plug Domain M3Q_76 PF00593 TonB dependent receptor M3Q_760 PF01926 50S ribosome-binding GTPase M3Q_760 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M3Q_763 PF00550 Phosphopantetheine attachment site M3Q_764 PF00550 Phosphopantetheine attachment site M3Q_766 PF00501 AMP-binding enzyme M3Q_766 PF13193 AMP-binding enzyme C-terminal domain M3Q_769 PF00221 Aromatic amino acid lyase M3Q_773 PF04820 Tryptophan halogenase M3Q_775 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_775 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_778 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_778 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_781 PF02556 Preprotein translocase subunit SecB M3Q_782 PF00462 Glutaredoxin M3Q_784 PF03193 RsgA GTPase M3Q_785 PF00929 Exonuclease M3Q_788 PF02321 Outer membrane efflux protein M3Q_789 PF12704 MacB-like periplasmic core domain M3Q_789 PF02687 FtsX-like permease family M3Q_789 PF00005 ABC transporter M3Q_790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M3Q_793 PF08264 Anticodon-binding domain of tRNA M3Q_793 PF00133 tRNA synthetases class I (I, L, M and V) M3Q_793 PF13603 Leucyl-tRNA synthetase, Domain 2 M3Q_793 PF09334 tRNA synthetases class I (M) M3Q_795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3Q_795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3Q_795 PF00205 Thiamine pyrophosphate enzyme, central domain M3Q_796 PF10369 Small subunit of acetolactate synthase M3Q_797 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M3Q_797 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M3Q_798 PF00990 Diguanylate cyclase, GGDEF domain M3Q_798 PF03707 Bacterial signalling protein N terminal repeat M3Q_798 PF00563 EAL domain M3Q_80 PF00156 Phosphoribosyl transferase domain M3Q_802 PF00009 Elongation factor Tu GTP binding domain M3Q_802 PF16658 Class II release factor RF3, C-terminal domain M3Q_802 PF03144 Elongation factor Tu domain 2 M3Q_805 PF01026 TatD related DNase M3Q_806 PF00694 Aconitase C-terminal domain M3Q_806 PF00330 Aconitase family (aconitate hydratase) M3Q_808 PF00899 ThiF family M3Q_809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_809 PF03466 LysR substrate binding domain M3Q_81 PF03372 Endonuclease/Exonuclease/phosphatase family M3Q_811 PF01207 Dihydrouridine synthase (Dus) M3Q_812 PF07690 Major Facilitator Superfamily M3Q_814 PF00892 EamA-like transporter family M3Q_815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M3Q_815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M3Q_816 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M3Q_817 PF02233 NAD(P) transhydrogenase beta subunit M3Q_82 PF03960 ArsC family M3Q_820 PF01261 Xylose isomerase-like TIM barrel M3Q_821 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M3Q_821 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M3Q_822 PF00378 Enoyl-CoA hydratase/isomerase M3Q_823 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M3Q_823 PF01627 Hpt domain M3Q_823 PF00512 His Kinase A (phospho-acceptor) domain M3Q_823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_823 PF00672 HAMP domain M3Q_823 PF00072 Response regulator receiver domain M3Q_824 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_826 PF05958 tRNA (Uracil-5-)-methyltransferase M3Q_827 PF13291 ACT domain M3Q_827 PF04607 Region found in RelA / SpoT proteins M3Q_827 PF02824 TGS domain M3Q_829 PF03819 MazG nucleotide pyrophosphohydrolase domain M3Q_831 PF12627 Probable RNA and SrmB- binding site of polymerase A M3Q_831 PF01743 Poly A polymerase head domain M3Q_831 PF12626 Polymerase A arginine-rich C-terminus M3Q_832 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M3Q_833 PF02548 Ketopantoate hydroxymethyltransferase M3Q_834 PF02569 Pantoate-beta-alanine ligase M3Q_835 PF03668 P-loop ATPase protein family M3Q_836 PF00381 PTS HPr component phosphorylation site M3Q_837 PF04751 Protein of unknown function (DUF615) M3Q_838 PF00501 AMP-binding enzyme M3Q_838 PF13193 AMP-binding enzyme C-terminal domain M3Q_839 PF03129 Anticodon binding domain M3Q_839 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3Q_839 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3Q_839 PF02824 TGS domain M3Q_84 PF07859 alpha/beta hydrolase fold M3Q_840 PF00707 Translation initiation factor IF-3, C-terminal domain M3Q_840 PF05198 Translation initiation factor IF-3, N-terminal domain M3Q_841 PF02798 Glutathione S-transferase, N-terminal domain M3Q_841 PF00043 Glutathione S-transferase, C-terminal domain M3Q_842 PF09335 SNARE associated Golgi protein M3Q_843 PF07690 Major Facilitator Superfamily M3Q_844 PF01632 Ribosomal protein L35 M3Q_845 PF00453 Ribosomal protein L20 M3Q_849 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M3Q_849 PF01409 tRNA synthetases class II core domain (F) M3Q_85 PF00990 Diguanylate cyclase, GGDEF domain M3Q_85 PF07694 5TMR of 5TMR-LYT M3Q_850 PF03147 Ferredoxin-fold anticodon binding domain M3Q_850 PF03484 tRNA synthetase B5 domain M3Q_850 PF03483 B3/4 domain M3Q_850 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M3Q_850 PF01588 Putative tRNA binding domain M3Q_851 PF00216 Bacterial DNA-binding protein M3Q_853 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3Q_853 PF07497 Rho termination factor, RNA-binding domain M3Q_853 PF07498 Rho termination factor, N-terminal domain M3Q_854 PF00085 Thioredoxin M3Q_855 PF02541 Ppx/GppA phosphatase family M3Q_856 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M3Q_857 PF01171 PP-loop family M3Q_857 PF09179 TilS substrate binding domain M3Q_857 PF11734 TilS substrate C-terminal domain M3Q_858 PF14748 Pyrroline-5-carboxylate reductase dimerisation M3Q_858 PF03807 NADP oxidoreductase coenzyme F420-dependent M3Q_859 PF02325 YGGT family M3Q_86 PF11412 Disulphide bond corrector protein DsbC M3Q_86 PF02683 Cytochrome C biogenesis protein transmembrane region M3Q_860 PF01367 5'-3' exonuclease, C-terminal SAM fold M3Q_860 PF01612 3'-5' exonuclease M3Q_860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M3Q_860 PF00476 DNA polymerase family A M3Q_864 PF00437 Type II/IV secretion system protein M3Q_865 PF02566 OsmC-like protein M3Q_866 PF01047 MarR family M3Q_868 PF00795 Carbon-nitrogen hydrolase M3Q_872 PF04552 Sigma-54, DNA binding domain M3Q_872 PF04963 Sigma-54 factor, core binding domain M3Q_872 PF00309 Sigma-54 factor, Activator interacting domain (AID) M3Q_873 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M3Q_874 PF01722 BolA-like protein M3Q_875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3Q_876 PF01634 ATP phosphoribosyltransferase M3Q_877 PF00815 Histidinol dehydrogenase M3Q_878 PF00155 Aminotransferase class I and II M3Q_879 PF00425 chorismate binding enzyme M3Q_879 PF04715 Anthranilate synthase component I, N terminal region M3Q_887 PF00293 NUDIX domain M3Q_888 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_889 PF00814 Glycoprotease family M3Q_890 PF04445 Putative SAM-dependent methyltransferase M3Q_892 PF00756 Putative esterase M3Q_894 PF00834 Ribulose-phosphate 3 epimerase family M3Q_897 PF07731 Multicopper oxidase M3Q_897 PF07732 Multicopper oxidase M3Q_897 PF00394 Multicopper oxidase M3Q_898 PF05275 Copper resistance protein B precursor (CopB) M3Q_900 PF00893 Small Multidrug Resistance protein M3Q_901 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3Q_901 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M3Q_902 PF01960 ArgJ family M3Q_903 PF02445 Quinolinate synthetase A protein M3Q_904 PF00962 Adenosine/AMP deaminase M3Q_905 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_905 PF00107 Zinc-binding dehydrogenase M3Q_906 PF03466 LysR substrate binding domain M3Q_906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_907 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_907 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_907 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_908 PF07690 Major Facilitator Superfamily M3Q_909 PF02515 CoA-transferase family III M3Q_911 PF14537 Cytochrome c3 M3Q_911 PF00890 FAD binding domain M3Q_914 PF07690 Major Facilitator Superfamily M3Q_915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_915 PF03466 LysR substrate binding domain M3Q_917 PF07687 Peptidase dimerisation domain M3Q_917 PF01546 Peptidase family M20/M25/M40 M3Q_918 PF12833 Helix-turn-helix domain M3Q_918 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M3Q_92 PF00576 HIUase/Transthyretin family M3Q_920 PF01810 LysE type translocator M3Q_921 PF03466 LysR substrate binding domain M3Q_921 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_923 PF08267 Cobalamin-independent synthase, N-terminal domain M3Q_923 PF01717 Cobalamin-independent synthase, Catalytic domain M3Q_924 PF01613 Flavin reductase like domain M3Q_929 PF02567 Phenazine biosynthesis-like protein M3Q_93 PF00860 Permease family M3Q_933 PF13360 PQQ-like domain M3Q_933 PF01011 PQQ enzyme repeat M3Q_947 PF13755 Sensor N-terminal transmembrane domain M3Q_947 PF00672 HAMP domain M3Q_947 PF00512 His Kinase A (phospho-acceptor) domain M3Q_947 PF13756 Stimulus-sensing domain M3Q_947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_948 PF00268 Ribonucleotide reductase, small chain M3Q_95 PF01494 FAD binding domain M3Q_950 PF02867 Ribonucleotide reductase, barrel domain M3Q_950 PF03477 ATP cone domain M3Q_950 PF00317 Ribonucleotide reductase, all-alpha domain M3Q_951 PF00072 Response regulator receiver domain M3Q_951 PF00486 Transcriptional regulatory protein, C terminal M3Q_952 PF00672 HAMP domain M3Q_952 PF00512 His Kinase A (phospho-acceptor) domain M3Q_952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_954 PF17151 Periplasmic sensor domain M3Q_954 PF00990 Diguanylate cyclase, GGDEF domain M3Q_955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M3Q_956 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M3Q_957 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M3Q_957 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M3Q_959 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M3Q_959 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M3Q_959 PF10531 SLBB domain M3Q_96 PF03561 Allantoicase repeat M3Q_960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M3Q_960 PF00384 Molybdopterin oxidoreductase M3Q_960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M3Q_961 PF00146 NADH dehydrogenase M3Q_962 PF12838 4Fe-4S dicluster domain M3Q_963 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M3Q_964 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M3Q_965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M3Q_965 PF00361 Proton-conducting membrane transporter M3Q_966 PF00361 Proton-conducting membrane transporter M3Q_967 PF00361 Proton-conducting membrane transporter M3Q_969 PF00313 'Cold-shock' DNA-binding domain M3Q_97 PF04115 Ureidoglycolate lyase M3Q_970 PF03466 LysR substrate binding domain M3Q_970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_971 PF00175 Oxidoreductase NAD-binding domain M3Q_971 PF00970 Oxidoreductase FAD-binding domain M3Q_974 PF05552 Conserved TM helix M3Q_977 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_978 PF13533 Biotin-lipoyl like M3Q_98 PF00106 short chain dehydrogenase M3Q_983 PF01588 Putative tRNA binding domain M3Q_983 PF09334 tRNA synthetases class I (M) M3Q_985 PF10609 NUBPL iron-transfer P-loop NTPase M3Q_986 PF01048 Phosphorylase superfamily M3Q_989 PF00692 dUTPase M3Q_99 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_99 PF01751 Toprim domain M3Q_99 PF00986 DNA gyrase B subunit, carboxyl terminus M3Q_99 PF00204 DNA gyrase B M3Q_995 PF01207 Dihydrouridine synthase (Dus) M3Q_997 PF00448 SRP54-type protein, GTPase domain M3Q_997 PF02978 Signal peptide binding domain M3Q_997 PF02881 SRP54-type protein, helical bundle domain M3Q_998 PF03309 Type III pantothenate kinase