M3Q_10 PF02678 Pirin M3Q_10 PF05726 Pirin C-terminal cupin domain M3Q_100 PF05728 Uncharacterised protein family (UPF0227) M3Q_1000 PF01925 M3Q_1000 M3Q_1001 PF00392 Bacterial regulatory proteins, gntR family M3Q_1001 PF07729 FCD domain M3Q_1002 PF02463 RecF/RecN/SMC N terminal domain M3Q_1003 PF04354 ZipA, C-terminal FtsZ-binding domain M3Q_1004 PF00533 BRCA1 C Terminus (BRCT) domain M3Q_1004 PF01653 NAD-dependent DNA ligase adenylation domain M3Q_1004 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M3Q_1004 PF03120 NAD-dependent DNA ligase OB-fold domain M3Q_1004 PF12826 Helix-hairpin-helix motif M3Q_1004 PF14520 Helix-hairpin-helix domain M3Q_1005 PF00210 Ferritin-like domain M3Q_1006 PF07690 Major Facilitator Superfamily M3Q_1007 PF00982 Glycosyltransferase family 20 M3Q_1008 PF02358 Trehalose-phosphatase M3Q_101 PF07819 PGAP1-like protein M3Q_1010 PF00202 Aminotransferase class-III M3Q_1011 PF00155 Aminotransferase class I and II M3Q_1012 PF13489 Methyltransferase domain M3Q_1013 PF13500 AAA domain M3Q_1014 PF00849 RNA pseudouridylate synthase M3Q_1014 PF01479 S4 domain M3Q_1015 PF04079 Putative transcriptional regulators (Ypuh-like) M3Q_1016 PF02616 ScpA/B protein M3Q_1017 PF01300 Telomere recombination M3Q_1018 PF04315 M3Q_1018 M3Q_1019 PF02620 M3Q_1019 M3Q_1020 PF01783 Ribosomal L32p protein family M3Q_1021 PF00698 Acyl transferase domain M3Q_1022 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_1023 PF00550 Phosphopantetheine attachment site M3Q_1024 PF01476 LysM domain M3Q_1024 PF04972 BON domain M3Q_1025 PF08543 Phosphomethylpyrimidine kinase M3Q_1026 PF13419 Haloacid dehalogenase-like hydrolase M3Q_1027 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M3Q_1028 PF09925 M3Q_1028 M3Q_1028 PF14351 M3Q_1028 M3Q_1029 PF14345 M3Q_1029 M3Q_1030 PF02261 Aspartate decarboxylase M3Q_1031 PF01195 Peptidyl-tRNA hydrolase M3Q_1032 PF01386 Ribosomal L25p family M3Q_1033 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M3Q_1033 PF14572 Phosphoribosyl synthetase-associated domain M3Q_1034 PF00288 GHMP kinases N terminal domain M3Q_1034 PF08544 GHMP kinases C terminal M3Q_1035 PF03550 Outer membrane lipoprotein LolB M3Q_1036 PF13181 Tetratricopeptide repeat M3Q_1036 PF14559 Tetratricopeptide repeat M3Q_1037 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M3Q_1037 PF01488 Shikimate / quinate 5-dehydrogenase M3Q_1037 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M3Q_1038 PF01807 CHC2 zinc finger M3Q_1038 PF08275 DNA primase catalytic core, N-terminal domain M3Q_1038 PF10410 DnaB-helicase binding domain of primase M3Q_1038 PF13662 Toprim domain M3Q_1039 PF13525 Outer membrane lipoprotein M3Q_1040 PF00849 RNA pseudouridylate synthase M3Q_1040 PF01479 S4 domain M3Q_1041 PF02578 Multi-copper polyphenol oxidoreductase laccase M3Q_1042 PF03358 NADPH-dependent FMN reductase M3Q_1043 PF01668 SmpB protein M3Q_1044 PF01467 Cytidylyltransferase M3Q_1046 PF07396 Phosphate-selective porin O and P M3Q_1047 PF03466 LysR substrate binding domain M3Q_1048 PF00180 Isocitrate/isopropylmalate dehydrogenase M3Q_1049 PF02028 BCCT family transporter M3Q_1050 PF07859 alpha/beta hydrolase fold M3Q_1051 PF00355 Rieske [2Fe-2S] domain M3Q_1051 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_1052 PF00171 Aldehyde dehydrogenase family M3Q_1053 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_1053 PF00175 Oxidoreductase NAD-binding domain M3Q_1053 PF00970 Oxidoreductase FAD-binding domain M3Q_1055 PF00795 Carbon-nitrogen hydrolase M3Q_1055 PF02540 NAD synthase M3Q_1057 PF02678 Pirin M3Q_1057 PF05726 Pirin C-terminal cupin domain M3Q_1058 PF03653 M3Q_1058 M3Q_1059 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_1059 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_1060 PF12787 M3Q_1060 M3Q_1061 PF00164 Ribosomal protein S12/S23 M3Q_1062 PF00177 Ribosomal protein S7p/S5e M3Q_1063 PF00009 Elongation factor Tu GTP binding domain M3Q_1063 PF00679 Elongation factor G C-terminus M3Q_1063 PF03144 Elongation factor Tu domain 2 M3Q_1063 PF03764 Elongation factor G, domain IV M3Q_1063 PF14492 Elongation Factor G, domain II M3Q_1064 PF00009 Elongation factor Tu GTP binding domain M3Q_1064 PF03143 Elongation factor Tu C-terminal domain M3Q_1064 PF03144 Elongation factor Tu domain 2 M3Q_1065 PF10118 M3Q_1065 M3Q_1066 PF10118 M3Q_1066 M3Q_1067 PF00583 Acetyltransferase (GNAT) family M3Q_1068 PF04376 M3Q_1068 M3Q_1068 PF04377 M3Q_1068 M3Q_1069 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M3Q_1070 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1071 PF01580 FtsK/SpoIIIE family M3Q_1071 PF09397 Ftsk gamma domain M3Q_1071 PF13491 M3Q_1071 M3Q_1072 PF01810 M3Q_1072 M3Q_1075 PF03776 Septum formation topological specificity factor MinE M3Q_1076 PF13614 AAA domain M3Q_1077 PF03775 Septum formation inhibitor MinC, C-terminal domain M3Q_1079 PF01553 Acyltransferase M3Q_1080 PF00691 OmpA family M3Q_1081 PF00580 UvrD/REP helicase N-terminal domain M3Q_1081 PF13361 UvrD-like helicase C-terminal domain M3Q_1082 PF00692 dUTPase M3Q_1083 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_1083 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_1083 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_1084 PF00696 Amino acid kinase family M3Q_1085 PF13444 Acetyltransferase (GNAT) domain M3Q_1086 PF13230 Glutamine amidotransferases class-II M3Q_1087 PF01814 Hemerythrin HHE cation binding domain M3Q_1089 PF03658 RnfH family Ubiquitin M3Q_1090 PF04355 SmpA / OmlA family M3Q_1091 PF01475 Ferric uptake regulator family M3Q_1092 PF00437 Type II/IV secretion system protein M3Q_1093 PF00437 Type II/IV secretion system protein M3Q_1094 PF01168 Alanine racemase, N-terminal domain M3Q_1095 PF13476 AAA domain M3Q_1095 PF13558 Putative exonuclease SbcCD, C subunit M3Q_1096 PF00149 Calcineurin-like phosphoesterase M3Q_1096 PF12320 Type 5 capsule protein repressor C-terminal domain M3Q_1097 PF02566 OsmC-like protein M3Q_11 PF00857 Isochorismatase family M3Q_110 PF01476 LysM domain M3Q_1100 PF01370 NAD dependent epimerase/dehydratase family M3Q_1100 PF08338 Domain of unknown function (DUF1731) M3Q_1101 PF01266 FAD dependent oxidoreductase M3Q_1102 PF00490 Delta-aminolevulinic acid dehydratase M3Q_1103 PF03061 Thioesterase superfamily M3Q_1104 PF00529 HlyD family secretion protein M3Q_1104 PF16576 M3Q_1104 M3Q_1105 PF07690 Major Facilitator Superfamily M3Q_1106 PF01019 Gamma-glutamyltranspeptidase M3Q_1107 PF00589 Phage integrase family M3Q_1107 PF13356 Domain of unknown function (DUF4102) M3Q_111 PF05954 Phage late control gene D protein (GPD) M3Q_111 PF10106 M3Q_111 M3Q_111 PF13296 M3Q_111 M3Q_1110 PF08867 M3Q_1110 M3Q_1118 PF13935 M3Q_1118 M3Q_112 PF05954 Phage late control gene D protein (GPD) M3Q_1123 PF10065 M3Q_1123 M3Q_1126 PF00717 Peptidase S24-like M3Q_1126 PF01381 Helix-turn-helix M3Q_1127 PF01381 Helix-turn-helix M3Q_113 PF02600 Disulfide bond formation protein DsbB M3Q_1135 PF00145 C-5 cytosine-specific DNA methylase M3Q_1137 PF01695 IstB-like ATP binding protein M3Q_114 PF04262 Glutamate-cysteine ligase M3Q_1140 PF05866 Endodeoxyribonuclease RusA M3Q_1141 PF12844 Helix-turn-helix domain M3Q_1146 PF07007 Protein of unknown function (DUF1311) M3Q_1148 PF07751 M3Q_1148 M3Q_115 PF06041 Bacterial protein of unknown function (DUF924) M3Q_1158 PF01258 Prokaryotic dksA/traR C4-type zinc finger M3Q_1161 PF12571 M3Q_1161 M3Q_117 PF04286 M3Q_117 M3Q_1172 PF10547 M3Q_1172 M3Q_1174 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M3Q_1175 PF05016 Plasmid stabilisation system protein M3Q_1179 PF02018 Carbohydrate binding domain M3Q_1179 PF09327 M3Q_1179 M3Q_1179 PF15711 M3Q_1179 M3Q_118 PF00155 Aminotransferase class I and II M3Q_1187 PF00271 Helicase conserved C-terminal domain M3Q_1187 PF04851 Type III restriction enzyme, res subunit M3Q_119 PF01554 MatE M3Q_1192 PF16082 M3Q_1192 M3Q_1195 PF05488 PAAR motif M3Q_1197 PF11799 impB/mucB/samB family C-terminal domain M3Q_1197 PF13438 M3Q_1197 M3Q_12 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_12 PF03466 LysR substrate binding domain M3Q_120 PF00106 short chain dehydrogenase M3Q_1200 PF13175 AAA ATPase domain M3Q_1201 PF02086 D12 class N6 adenine-specific DNA methyltransferase M3Q_1206 PF03573 outer membrane porin, OprD family M3Q_1207 PF00083 Sugar (and other) transporter M3Q_1208 PF00701 Dihydrodipicolinate synthetase family M3Q_1209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1209 PF03466 LysR substrate binding domain M3Q_1210 PF04542 Sigma-70 region 2 M3Q_1210 PF08281 Sigma-70, region 4 M3Q_1211 PF04773 FecR protein M3Q_1211 PF16220 M3Q_1211 M3Q_1212 PF00593 TonB dependent receptor M3Q_1212 PF07660 Secretin and TonB N terminus short domain M3Q_1212 PF07715 TonB-dependent Receptor Plug Domain M3Q_1213 PF01298 Transferrin binding protein-like solute binding protein M3Q_1214 PF04575 M3Q_1214 M3Q_1215 PF03544 Gram-negative bacterial TonB protein C-terminal M3Q_1216 PF01126 Heme oxygenase M3Q_1217 PF04304 M3Q_1217 M3Q_1219 PF06912 M3Q_1219 M3Q_122 PF00072 Response regulator receiver domain M3Q_122 PF00486 Transcriptional regulatory protein, C terminal M3Q_1220 PF12697 Alpha/beta hydrolase family M3Q_1221 PF13520 Amino acid permease M3Q_1222 PF02574 Homocysteine S-methyltransferase M3Q_1224 PF06039 M3Q_1224 M3Q_1225 PF00732 GMC oxidoreductase M3Q_1225 PF05199 GMC oxidoreductase M3Q_1226 PF00171 Aldehyde dehydrogenase family M3Q_1227 PF00440 Bacterial regulatory proteins, tetR family M3Q_1227 PF13977 Bacterial transcriptional repressor M3Q_1228 PF02028 BCCT family transporter M3Q_1229 PF02028 BCCT family transporter M3Q_123 PF00512 His Kinase A (phospho-acceptor) domain M3Q_123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_123 PF11808 M3Q_123 M3Q_123 PF13188 PAS domain M3Q_1230 PF01914 M3Q_1230 M3Q_1231 PF03061 Thioesterase superfamily M3Q_1233 PF02492 CobW/HypB/UreG, nucleotide-binding domain M3Q_1234 PF00375 Sodium:dicarboxylate symporter family M3Q_1235 PF07152 YaeQ protein M3Q_1236 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_1237 PF01522 Polysaccharide deacetylase M3Q_1237 PF14883 Hypothetical glycosyl hydrolase family 13 M3Q_1238 PF13641 Glycosyltransferase like family 2 M3Q_1239 PF13994 M3Q_1239 M3Q_124 PF03583 Secretory lipase M3Q_1240 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_1241 PF04973 M3Q_1241 M3Q_1243 PF01614 Bacterial transcriptional regulator M3Q_1243 PF09339 IclR helix-turn-helix domain M3Q_1244 PF00355 Rieske [2Fe-2S] domain M3Q_1246 PF00355 Rieske [2Fe-2S] domain M3Q_1247 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_1248 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_1249 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1249 PF14759 Reductase C-terminal M3Q_125 PF02666 M3Q_125 M3Q_1250 PF07690 Major Facilitator Superfamily M3Q_1251 PF07883 Cupin domain M3Q_1252 PF12697 Alpha/beta hydrolase family M3Q_1253 PF00106 short chain dehydrogenase M3Q_1254 PF01958 Domain of unknown function DUF108 M3Q_1254 PF03447 Homoserine dehydrogenase, NAD binding domain M3Q_1255 PF00171 Aldehyde dehydrogenase family M3Q_1256 PF00205 Thiamine pyrophosphate enzyme, central domain M3Q_1256 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3Q_1256 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3Q_1258 PF07690 Major Facilitator Superfamily M3Q_1259 PF01327 Polypeptide deformylase M3Q_126 PF00581 Rhodanese-like domain M3Q_1260 PF04960 Glutaminase M3Q_1261 PF12833 Helix-turn-helix domain M3Q_1262 PF07690 Major Facilitator Superfamily M3Q_1263 PF01263 Aldose 1-epimerase M3Q_1265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1265 PF03466 LysR substrate binding domain M3Q_1266 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_1267 PF07690 Major Facilitator Superfamily M3Q_1268 PF00456 Transketolase, thiamine diphosphate binding domain M3Q_1269 PF02779 Transketolase, pyrimidine binding domain M3Q_1269 PF02780 Transketolase, C-terminal domain M3Q_127 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M3Q_1270 PF00809 Pterin binding enzyme M3Q_1270 PF02310 B12 binding domain M3Q_1270 PF02574 Homocysteine S-methyltransferase M3Q_1270 PF02607 B12 binding domain M3Q_1270 PF02965 Vitamin B12 dependent methionine synthase, activation domain M3Q_1271 PF01384 M3Q_1271 M3Q_1272 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_1275 PF03781 Sulfatase-modifying factor enzyme 1 M3Q_1276 PF00884 Sulfatase M3Q_1277 PF01694 Rhomboid family M3Q_1278 PF01106 NifU-like domain M3Q_1278 PF01521 Iron-sulphur cluster biosynthesis M3Q_1279 PF00593 TonB dependent receptor M3Q_1279 PF07715 TonB-dependent Receptor Plug Domain M3Q_128 PF02580 D-Tyr-tRNA(Tyr) deacylase M3Q_1281 PF12697 Alpha/beta hydrolase family M3Q_1282 PF00484 Carbonic anhydrase M3Q_1283 PF13472 GDSL-like Lipase/Acylhydrolase family M3Q_1284 PF00005 ABC transporter M3Q_1285 PF02687 M3Q_1285 M3Q_1286 PF01694 Rhomboid family M3Q_1287 PF00912 Transglycosylase M3Q_1288 PF02503 Polyphosphate kinase middle domain M3Q_1288 PF13089 Polyphosphate kinase N-terminal domain M3Q_1288 PF13090 Polyphosphate kinase C-terminal domain M3Q_1289 PF05036 Sporulation related domain M3Q_1290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1290 PF03466 LysR substrate binding domain M3Q_1291 PF00561 alpha/beta hydrolase fold M3Q_1292 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1293 PF00301 Rubredoxin M3Q_1294 PF08327 Activator of Hsp90 ATPase homolog 1-like protein M3Q_1295 PF05728 Uncharacterised protein family (UPF0227) M3Q_1296 PF00152 tRNA synthetases class II (D, K and N) M3Q_1296 PF01336 OB-fold nucleic acid binding domain M3Q_1297 PF14052 Capsule assembly protein Wzi M3Q_1299 PF01507 Phosphoadenosine phosphosulfate reductase family M3Q_13 PF00171 Aldehyde dehydrogenase family M3Q_1300 PF00009 Elongation factor Tu GTP binding domain M3Q_1301 PF09998 M3Q_1301 M3Q_1303 PF03600 Citrate transporter M3Q_1304 PF00571 CBS domain M3Q_1304 PF01595 M3Q_1304 M3Q_1304 PF03471 Transporter associated domain M3Q_1305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1305 PF03466 LysR substrate binding domain M3Q_1306 PF00463 Isocitrate lyase family M3Q_1307 PF04170 NlpE N-terminal domain M3Q_1309 PF01774 UreD urease accessory protein M3Q_131 PF12710 haloacid dehalogenase-like hydrolase M3Q_131 PF13740 ACT domain M3Q_1310 PF00547 Urease, gamma subunit M3Q_1311 PF00699 Urease beta subunit M3Q_1312 PF00449 Urease alpha-subunit, N-terminal domain M3Q_1312 PF01979 Amidohydrolase family M3Q_1313 PF02814 UreE urease accessory protein, N-terminal domain M3Q_1313 PF05194 UreE urease accessory protein, C-terminal domain M3Q_1314 PF01730 UreF M3Q_1315 PF02492 CobW/HypB/UreG, nucleotide-binding domain M3Q_1316 PF04955 M3Q_1316 M3Q_1317 PF03602 Conserved hypothetical protein 95 M3Q_1318 PF00905 Penicillin binding protein transpeptidase domain M3Q_1318 PF03717 Penicillin-binding Protein dimerisation domain M3Q_1321 PF00406 Adenylate kinase M3Q_1321 PF05191 Adenylate kinase, active site lid M3Q_1322 PF00633 Helix-hairpin-helix motif M3Q_1322 PF00730 HhH-GPD superfamily base excision DNA repair protein M3Q_1322 PF10576 Iron-sulfur binding domain of endonuclease III M3Q_1323 PF04060 Putative Fe-S cluster M3Q_1323 PF14697 4Fe-4S dicluster domain M3Q_1324 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3Q_1324 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M3Q_1325 PF03724 META domain M3Q_1325 PF14302 M3Q_1325 M3Q_1326 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M3Q_1327 PF02590 Predicted SPOUT methyltransferase M3Q_1328 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_1328 PF02190 ATP-dependent protease La (LON) domain M3Q_1328 PF05362 Lon protease (S16) C-terminal proteolytic domain M3Q_1329 PF03895 YadA-like C-terminal region M3Q_1329 PF05658 Head domain of trimeric autotransporter adhesin M3Q_1329 PF05662 Coiled stalk of trimeric autotransporter adhesin M3Q_1329 PF13018 M3Q_1329 M3Q_133 PF00925 GTP cyclohydrolase II M3Q_133 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M3Q_1330 PF00691 OmpA family M3Q_1330 PF04355 SmpA / OmlA family M3Q_1331 PF01812 5-formyltetrahydrofolate cyclo-ligase family M3Q_134 PF00885 6,7-dimethyl-8-ribityllumazine synthase M3Q_1340 PF13479 M3Q_1340 M3Q_1349 PF00717 Peptidase S24-like M3Q_1349 PF01381 Helix-turn-helix M3Q_135 PF01029 NusB family M3Q_1353 PF04492 M3Q_1353 M3Q_1357 PF04480 Protein of unknown function (DUF559) M3Q_136 PF00586 AIR synthase related protein, N-terminal domain M3Q_136 PF02769 AIR synthase related protein, C-terminal domain M3Q_1369 PF13876 M3Q_1369 M3Q_137 PF04608 Phosphatidylglycerophosphatase A M3Q_1372 PF12949 HeH/LEM domain M3Q_1379 PF13554 Bacteriophage related domain of unknown function M3Q_138 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_138 PF12804 MobA-like NTP transferase domain M3Q_138 PF14602 Hexapeptide repeat of succinyl-transferase M3Q_1381 PF08239 Bacterial SH3 domain M3Q_1386 PF14076 M3Q_1386 M3Q_1387 PF12844 Helix-turn-helix domain M3Q_139 PF01380 SIS domain M3Q_139 PF13522 Glutamine amidotransferase domain M3Q_1390 PF06120 M3Q_1390 M3Q_1393 PF08875 M3Q_1393 M3Q_1397 PF05838 Glycosyl hydrolase 108 M3Q_1397 PF09374 Predicted Peptidoglycan domain M3Q_1398 PF00593 TonB dependent receptor M3Q_1398 PF07715 TonB-dependent Receptor Plug Domain M3Q_1399 PF00884 Sulfatase M3Q_1399 PF08019 M3Q_1399 M3Q_14 PF00202 Aminotransferase class-III M3Q_140 PF01177 Asp/Glu/Hydantoin racemase M3Q_1402 PF00589 Phage integrase family M3Q_1402 PF13356 Domain of unknown function (DUF4102) M3Q_141 PF13419 Haloacid dehalogenase-like hydrolase M3Q_1410 PF00717 Peptidase S24-like M3Q_1410 PF01381 Helix-turn-helix M3Q_1413 PF07120 M3Q_1413 M3Q_1414 PF00772 DnaB-like helicase N terminal domain M3Q_1415 PF03796 DnaB-like helicase C terminal domain M3Q_142 PF05960 Bacterial protein of unknown function (DUF885) M3Q_143 PF00491 Arginase family M3Q_1431 PF03592 Terminase small subunit M3Q_1433 PF03354 M3Q_1433 M3Q_1434 PF04860 Phage portal protein M3Q_1435 PF04586 M3Q_1435 M3Q_1436 PF05065 Phage capsid family M3Q_1438 PF05135 Phage gp6-like head-tail connector protein M3Q_1439 PF05521 Phage head-tail joining protein M3Q_144 PF01979 Amidohydrolase family M3Q_1440 PF04883 M3Q_1440 M3Q_1441 PF11367 Protein of unknown function (DUF3168) M3Q_1442 PF16460 M3Q_1442 M3Q_1443 PF16459 M3Q_1443 M3Q_1446 PF01464 Transglycosylase SLT domain M3Q_1448 PF08875 M3Q_1448 M3Q_145 PF00324 Amino acid permease M3Q_1453 PF16082 M3Q_1453 M3Q_1454 PF00959 Phage lysozyme M3Q_1457 PF00589 Phage integrase family M3Q_1457 PF13356 Domain of unknown function (DUF4102) M3Q_1458 PF05164 Cell division protein ZapA M3Q_146 PF00221 Aromatic amino acid lyase M3Q_1460 PF03695 Uncharacterised protein family (UPF0149) M3Q_1461 PF00557 Metallopeptidase family M24 M3Q_1461 PF05195 Aminopeptidase P, N-terminal domain M3Q_1462 PF01494 FAD binding domain M3Q_1463 PF01494 FAD binding domain M3Q_1465 PF13411 MerR HTH family regulatory protein M3Q_1466 PF01545 Cation efflux family M3Q_1467 PF01810 M3Q_1467 M3Q_1468 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1468 PF03466 LysR substrate binding domain M3Q_147 PF01175 Urocanase M3Q_147 PF17391 M3Q_147 M3Q_147 PF17392 M3Q_147 M3Q_1470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M3Q_1471 PF02021 Uncharacterised protein family UPF0102 M3Q_1473 PF07859 alpha/beta hydrolase fold M3Q_1474 PF00293 NUDIX domain M3Q_1474 PF09297 NADH pyrophosphatase zinc ribbon domain M3Q_1476 PF00075 RNase H M3Q_1476 PF00929 Exonuclease M3Q_1477 PF01464 Transglycosylase SLT domain M3Q_1477 PF01476 LysM domain M3Q_1478 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3Q_1479 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_148 PF05962 HutD M3Q_1480 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1481 PF00005 ABC transporter M3Q_1481 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3Q_1482 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_1483 PF00593 TonB dependent receptor M3Q_1483 PF07715 TonB-dependent Receptor Plug Domain M3Q_1484 PF00929 Exonuclease M3Q_1485 PF01979 Amidohydrolase family M3Q_1486 PF00990 GGDEF domain M3Q_1487 PF00764 Arginosuccinate synthase M3Q_1488 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_1488 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1489 PF01435 Peptidase family M48 M3Q_149 PF00392 Bacterial regulatory proteins, gntR family M3Q_149 PF07702 UTRA domain M3Q_1490 PF05987 M3Q_1490 M3Q_1491 PF03180 NLPA lipoprotein M3Q_1493 PF00440 Bacterial regulatory proteins, tetR family M3Q_1494 PF05954 Phage late control gene D protein (GPD) M3Q_1494 PF10106 M3Q_1494 M3Q_1494 PF13296 M3Q_1494 M3Q_1495 PF03527 M3Q_1495 M3Q_1495 PF05593 M3Q_1495 M3Q_1496 PF08238 Sel1 repeat M3Q_1497 PF08238 Sel1 repeat M3Q_1498 PF08238 Sel1 repeat M3Q_15 PF00155 Aminotransferase class I and II M3Q_15 PF00392 Bacterial regulatory proteins, gntR family M3Q_150 PF01757 M3Q_150 M3Q_1503 PF00324 Amino acid permease M3Q_1504 PF01266 FAD dependent oxidoreductase M3Q_1505 PF00324 Amino acid permease M3Q_1506 PF02743 Cache domain M3Q_1507 PF00392 Bacterial regulatory proteins, gntR family M3Q_1507 PF07729 FCD domain M3Q_1508 PF12680 SnoaL-like domain M3Q_1509 PF00171 Aldehyde dehydrogenase family M3Q_151 PF02492 CobW/HypB/UreG, nucleotide-binding domain M3Q_151 PF07683 Cobalamin synthesis protein cobW C-terminal domain M3Q_1510 PF01037 AsnC family M3Q_1510 PF13404 AsnC-type helix-turn-helix domain M3Q_1511 PF00202 Aminotransferase class-III M3Q_1512 PF04958 Arginine N-succinyltransferase beta subunit M3Q_1514 PF13610 M3Q_1514 M3Q_1515 PF01526 M3Q_1515 M3Q_1516 PF00239 Resolvase, N terminal domain M3Q_1517 PF13610 M3Q_1517 M3Q_1519 PF02678 Pirin M3Q_152 PF08291 Peptidase M15 M3Q_1520 PF10118 M3Q_1520 M3Q_1521 PF00106 short chain dehydrogenase M3Q_1522 PF13738 Pyridine nucleotide-disulphide oxidoreductase M3Q_1524 PF00860 Permease family M3Q_1525 PF00962 Adenosine/AMP deaminase M3Q_1526 PF01292 Prokaryotic cytochrome b561 M3Q_1528 PF01351 Ribonuclease HII M3Q_1529 PF02599 Global regulator protein family M3Q_153 PF00324 Amino acid permease M3Q_1530 PF00696 Amino acid kinase family M3Q_1530 PF01842 ACT domain M3Q_1530 PF13840 ACT domain M3Q_1531 PF01411 tRNA synthetases class II (A) M3Q_1531 PF02272 DHHA1 domain M3Q_1531 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3Q_1532 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3Q_1532 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M3Q_1533 PF13393 Histidyl-tRNA synthetase M3Q_1534 PF00709 Adenylosuccinate synthetase M3Q_1536 PF01435 Peptidase family M48 M3Q_1537 PF00248 Aldo/keto reductase family M3Q_1539 PF01609 Transposase DDE domain M3Q_154 PF01557 Fumarylacetoacetate (FAA) hydrolase family M3Q_154 PF09298 Fumarylacetoacetase N-terminal M3Q_1540 PF00027 Cyclic nucleotide-binding domain M3Q_1540 PF00325 Bacterial regulatory proteins, crp family M3Q_1541 PF02566 OsmC-like protein M3Q_1542 PF00583 Acetyltransferase (GNAT) family M3Q_1543 PF01551 Peptidase family M23 M3Q_1544 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_1544 PF02861 Clp amino terminal domain M3Q_1544 PF07724 AAA domain (Cdc48 subfamily) M3Q_1544 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_1545 PF02464 Competence-damaged protein M3Q_1547 PF01170 Putative RNA methylase family UPF0020 M3Q_1547 PF02926 THUMP domain M3Q_1547 PF10672 S-adenosylmethionine-dependent methyltransferase M3Q_1549 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3Q_1549 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3Q_155 PF02798 Glutathione S-transferase, N-terminal domain M3Q_155 PF14497 Glutathione S-transferase, C-terminal domain M3Q_1551 PF00691 OmpA family M3Q_1552 PF03807 NADP oxidoreductase coenzyme F420-dependent M3Q_1552 PF10728 Domain of unknown function (DUF2520) M3Q_1553 PF00043 Glutathione S-transferase, C-terminal domain M3Q_1553 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1554 PF02390 Putative methyltransferase M3Q_1555 PF00932 Lamin Tail Domain M3Q_1556 PF00043 Glutathione S-transferase, C-terminal domain M3Q_1556 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1558 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_1558 PF13192 Thioredoxin domain M3Q_1559 PF07866 Protein of unknown function (DUF1653) M3Q_156 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_1560 PF01596 O-methyltransferase M3Q_1561 PF13619 M3Q_1561 M3Q_1562 PF00578 AhpC/TSA family M3Q_1562 PF10417 C-terminal domain of 1-Cys peroxiredoxin M3Q_1563 PF00270 DEAD/DEAH box helicase M3Q_1563 PF00271 Helicase conserved C-terminal domain M3Q_1563 PF04408 Helicase associated domain (HA2) M3Q_1563 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M3Q_1563 PF11898 M3Q_1563 M3Q_1564 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M3Q_1564 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M3Q_1565 PF03573 outer membrane porin, OprD family M3Q_1566 PF07690 Major Facilitator Superfamily M3Q_1567 PF03594 M3Q_1567 M3Q_1568 PF00106 short chain dehydrogenase M3Q_1569 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_1569 PF00175 Oxidoreductase NAD-binding domain M3Q_1569 PF00970 Oxidoreductase FAD-binding domain M3Q_157 PF01614 Bacterial transcriptional regulator M3Q_157 PF09339 IclR helix-turn-helix domain M3Q_1570 PF00866 Ring hydroxylating beta subunit M3Q_1571 PF00355 Rieske [2Fe-2S] domain M3Q_1571 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_1572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1572 PF03466 LysR substrate binding domain M3Q_1573 PF00403 Heavy-metal-associated domain M3Q_1574 PF00122 E1-E2 ATPase M3Q_1574 PF00403 Heavy-metal-associated domain M3Q_1574 PF00702 haloacid dehalogenase-like hydrolase M3Q_1575 PF00376 MerR family regulatory protein M3Q_1575 PF09278 MerR, DNA binding M3Q_1576 PF04828 Glutathione-dependent formaldehyde-activating enzyme M3Q_1577 PF03860 Domain of Unknown Function (DUF326) M3Q_1579 PF01810 M3Q_1579 M3Q_158 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_158 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal M3Q_1581 PF02609 Exonuclease VII small subunit M3Q_1582 PF02601 M3Q_1582 M3Q_1582 PF13742 M3Q_1582 M3Q_1584 PF00717 Peptidase S24-like M3Q_1584 PF01381 Helix-turn-helix M3Q_1587 PF05838 Glycosyl hydrolase 108 M3Q_1587 PF09374 Predicted Peptidoglycan domain M3Q_1588 PF01810 M3Q_1588 M3Q_1589 PF00313 'Cold-shock' DNA-binding domain M3Q_159 PF04463 M3Q_159 M3Q_1591 PF03807 NADP oxidoreductase coenzyme F420-dependent M3Q_1591 PF14748 Pyrroline-5-carboxylate reductase dimerisation M3Q_1595 PF04233 M3Q_1595 M3Q_1596 PF07690 Major Facilitator Superfamily M3Q_1597 PF01638 HxlR-like helix-turn-helix M3Q_16 PF00324 Amino acid permease M3Q_160 PF01554 MatE M3Q_1600 PF13628 M3Q_1600 M3Q_1602 PF01406 tRNA synthetases class I (C) catalytic domain M3Q_1602 PF09190 DALR domain M3Q_1603 PF00571 CBS domain M3Q_1603 PF01380 SIS domain M3Q_1604 PF08282 haloacid dehalogenase-like hydrolase M3Q_1605 PF06835 Lipopolysaccharide-assembly, LptC-related M3Q_1606 PF03968 OstA-like protein M3Q_1607 PF00005 ABC transporter M3Q_1607 PF12399 Branched-chain amino acid ATP-binding cassette transporter M3Q_1608 PF02321 Outer membrane efflux protein M3Q_1609 PF00005 ABC transporter M3Q_1609 PF00664 ABC transporter transmembrane region M3Q_161 PF01758 Sodium Bile acid symporter family M3Q_1610 PF13437 HlyD family secretion protein M3Q_1610 PF13533 Biotin-lipoyl like M3Q_1611 PF01205 Uncharacterized protein family UPF0029 M3Q_1611 PF09186 Domain of unknown function (DUF1949) M3Q_1612 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_1612 PF14602 Hexapeptide repeat of succinyl-transferase M3Q_1613 PF00582 Universal stress protein family M3Q_1614 PF01596 O-methyltransferase M3Q_1615 PF08291 Peptidase M15 M3Q_1616 PF00037 4Fe-4S binding domain M3Q_1616 PF11953 Domain of unknown function (DUF3470) M3Q_1618 PF00488 MutS domain V M3Q_1618 PF01624 MutS domain I M3Q_1618 PF05188 MutS domain II M3Q_1618 PF05190 MutS family domain IV M3Q_1618 PF05192 MutS domain III M3Q_1619 PF01037 AsnC family M3Q_1619 PF13404 AsnC-type helix-turn-helix domain M3Q_162 PF00857 Isochorismatase family M3Q_1620 PF00892 EamA-like transporter family M3Q_1621 PF00563 EAL domain M3Q_1622 PF03279 M3Q_1622 M3Q_1623 PF00440 Bacterial regulatory proteins, tetR family M3Q_1624 PF07690 Major Facilitator Superfamily M3Q_1625 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) M3Q_1626 PF07739 TipAS antibiotic-recognition domain M3Q_1626 PF13411 MerR HTH family regulatory protein M3Q_1627 PF08856 M3Q_1627 M3Q_1628 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_1628 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_163 PF00701 Dihydrodipicolinate synthetase family M3Q_1630 PF00583 Acetyltransferase (GNAT) family M3Q_1631 PF13419 Haloacid dehalogenase-like hydrolase M3Q_1632 PF13354 Beta-lactamase enzyme family M3Q_1633 PF05954 Phage late control gene D protein (GPD) M3Q_1633 PF10106 M3Q_1633 M3Q_1633 PF13296 M3Q_1633 M3Q_1634 PF03527 M3Q_1634 M3Q_1634 PF05593 M3Q_1634 M3Q_1634 PF15636 M3Q_1634 M3Q_1637 PF03466 LysR substrate binding domain M3Q_1638 PF01566 M3Q_1638 M3Q_1639 PF03746 LamB/YcsF family M3Q_1640 PF07286 Protein of unknown function (DUF1445) M3Q_1641 PF02626 Allophanate hydrolase subunit 2 M3Q_1641 PF02682 Allophanate hydrolase subunit 1 M3Q_1642 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M3Q_1642 PF00364 Biotin-requiring enzyme M3Q_1642 PF02785 Biotin carboxylase C-terminal domain M3Q_1642 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_1643 PF00654 Voltage gated chloride channel M3Q_1644 PF08238 Sel1 repeat M3Q_1648 PF00440 Bacterial regulatory proteins, tetR family M3Q_1649 PF10604 Polyketide cyclase / dehydrase and lipid transport M3Q_165 PF01259 SAICAR synthetase M3Q_1650 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_1650 PF13823 Alcohol dehydrogenase GroES-associated M3Q_1651 PF09347 Domain of unknown function (DUF1989) M3Q_1652 PF09347 Domain of unknown function (DUF1989) M3Q_1653 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M3Q_1653 PF00364 Biotin-requiring enzyme M3Q_1653 PF02626 Allophanate hydrolase subunit 2 M3Q_1653 PF02682 Allophanate hydrolase subunit 1 M3Q_1653 PF02785 Biotin carboxylase C-terminal domain M3Q_1653 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_1654 PF02525 Flavodoxin-like fold M3Q_1655 PF01638 HxlR-like helix-turn-helix M3Q_1658 PF08753 NikR C terminal nickel binding domain M3Q_1659 PF01425 Amidase M3Q_1660 PF09084 NMT1/THI5 like M3Q_1661 PF00005 ABC transporter M3Q_1662 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1665 PF05591 M3Q_1665 M3Q_1666 PF05943 M3Q_1666 M3Q_1667 PF05638 Protein of unknown function (DUF796) M3Q_1668 PF04965 Gene 25-like lysozyme M3Q_1669 PF05947 M3Q_1669 M3Q_167 PF01226 Formate/nitrite transporter M3Q_1670 PF06996 M3Q_1670 M3Q_1672 PF06744 M3Q_1672 M3Q_1672 PF06761 M3Q_1672 M3Q_1672 PF14331 M3Q_1672 M3Q_1673 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) M3Q_1674 PF00691 OmpA family M3Q_1675 PF05488 PAAR motif M3Q_1676 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_1676 PF07724 AAA domain (Cdc48 subfamily) M3Q_1676 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_1677 PF06812 M3Q_1677 M3Q_1678 PF05936 M3Q_1678 M3Q_1679 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M3Q_168 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_168 PF12002 MgsA AAA+ ATPase C terminal M3Q_168 PF16193 M3Q_168 M3Q_1681 PF13539 D-alanyl-D-alanine carboxypeptidase M3Q_1682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1682 PF03466 LysR substrate binding domain M3Q_1683 PF12796 Ankyrin repeats (3 copies) M3Q_1685 PF07690 Major Facilitator Superfamily M3Q_1686 PF06224 M3Q_1686 M3Q_1687 PF00583 Acetyltransferase (GNAT) family M3Q_1688 PF02677 M3Q_1688 M3Q_169 PF07995 Glucose / Sorbosone dehydrogenase M3Q_1690 PF03891 M3Q_1690 M3Q_1690 PF11720 Peptidase inhibitor I78 family M3Q_1692 PF07690 Major Facilitator Superfamily M3Q_1693 PF00171 Aldehyde dehydrogenase family M3Q_1694 PF13520 Amino acid permease M3Q_1695 PF03313 M3Q_1695 M3Q_1695 PF03315 Serine dehydratase beta chain M3Q_1696 PF00171 Aldehyde dehydrogenase family M3Q_1696 PF01575 MaoC like domain M3Q_1697 PF05138 Phenylacetic acid catabolic protein M3Q_1698 PF06243 Phenylacetic acid degradation B M3Q_1699 PF05138 Phenylacetic acid catabolic protein M3Q_17 PF01381 Helix-turn-helix M3Q_17 PF07883 Cupin domain M3Q_170 PF03692 M3Q_170 M3Q_1700 PF01883 Domain of unknown function DUF59 M3Q_1701 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_1701 PF00175 Oxidoreductase NAD-binding domain M3Q_1701 PF00970 Oxidoreductase FAD-binding domain M3Q_1702 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_1703 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_1704 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_1704 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_1705 PF00108 Thiolase, N-terminal domain M3Q_1705 PF02803 Thiolase, C-terminal domain M3Q_1706 PF00501 AMP-binding enzyme M3Q_1706 PF14535 AMP-binding enzyme C-terminal domain M3Q_1707 PF07848 PaaX-like protein M3Q_1707 PF08223 PaaX-like protein C-terminal domain M3Q_1708 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_1709 PF03061 Thioesterase superfamily M3Q_171 PF07043 M3Q_171 M3Q_1712 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M3Q_1714 PF00440 Bacterial regulatory proteins, tetR family M3Q_1716 PF00199 Catalase M3Q_1717 PF01292 Prokaryotic cytochrome b561 M3Q_1718 PF07045 Protein of unknown function (DUF1330) M3Q_1719 PF00392 Bacterial regulatory proteins, gntR family M3Q_1719 PF07729 FCD domain M3Q_172 PF01738 Dienelactone hydrolase family M3Q_1720 PF06684 Amino acid synthesis M3Q_1721 PF12697 Alpha/beta hydrolase family M3Q_1722 PF01613 Flavin reductase like domain M3Q_1723 PF00296 Luciferase-like monooxygenase M3Q_1724 PF00171 Aldehyde dehydrogenase family M3Q_1725 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M3Q_1727 PF00171 Aldehyde dehydrogenase family M3Q_1728 PF02627 Carboxymuconolactone decarboxylase family M3Q_1729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1729 PF03466 LysR substrate binding domain M3Q_173 PF01230 HIT domain M3Q_1730 PF02525 Flavodoxin-like fold M3Q_1731 PF01614 Bacterial transcriptional regulator M3Q_1731 PF09339 IclR helix-turn-helix domain M3Q_1732 PF01494 FAD binding domain M3Q_1733 PF00392 Bacterial regulatory proteins, gntR family M3Q_1733 PF07702 UTRA domain M3Q_1734 PF13343 Bacterial extracellular solute-binding protein M3Q_1735 PF00005 ABC transporter M3Q_1736 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1737 PF01266 FAD dependent oxidoreductase M3Q_1738 PF00266 Aminotransferase class-V M3Q_1739 PF13419 Haloacid dehalogenase-like hydrolase M3Q_174 PF00633 Helix-hairpin-helix motif M3Q_174 PF00730 HhH-GPD superfamily base excision DNA repair protein M3Q_174 PF14815 NUDIX domain M3Q_1740 PF07690 Major Facilitator Superfamily M3Q_1741 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1741 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1741 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1742 PF02515 CoA-transferase family III M3Q_1743 PF01614 Bacterial transcriptional regulator M3Q_1743 PF09339 IclR helix-turn-helix domain M3Q_1744 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_1745 PF03060 Nitronate monooxygenase M3Q_1746 PF07690 Major Facilitator Superfamily M3Q_1747 PF01614 Bacterial transcriptional regulator M3Q_1747 PF09339 IclR helix-turn-helix domain M3Q_1748 PF00108 Thiolase, N-terminal domain M3Q_1748 PF02803 Thiolase, C-terminal domain M3Q_1749 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_1749 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_175 PF01551 Peptidase family M23 M3Q_1750 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_1751 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_1752 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1752 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1752 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1753 PF07690 Major Facilitator Superfamily M3Q_1754 PF01144 Coenzyme A transferase M3Q_1755 PF01144 Coenzyme A transferase M3Q_1757 PF07690 Major Facilitator Superfamily M3Q_1758 PF03061 Thioesterase superfamily M3Q_1759 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1759 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1759 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1759 PF12418 M3Q_1759 M3Q_1759 PF12806 M3Q_1759 M3Q_1760 PF13622 Thioesterase-like superfamily M3Q_1761 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M3Q_1762 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1762 PF03466 LysR substrate binding domain M3Q_1763 PF00682 HMGL-like M3Q_1764 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M3Q_1764 PF00364 Biotin-requiring enzyme M3Q_1764 PF02785 Biotin carboxylase C-terminal domain M3Q_1764 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_1765 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_1766 PF01039 Carboxyl transferase domain M3Q_1767 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1767 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1767 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1768 PF00440 Bacterial regulatory proteins, tetR family M3Q_1769 PF00501 AMP-binding enzyme M3Q_1769 PF13193 AMP-binding enzyme C-terminal domain M3Q_177 PF03352 Methyladenine glycosylase M3Q_1770 PF13649 Methyltransferase domain M3Q_1772 PF13472 GDSL-like Lipase/Acylhydrolase family M3Q_1773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1773 PF03466 LysR substrate binding domain M3Q_178 PF00107 Zinc-binding dehydrogenase M3Q_178 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_1781 PF02464 Competence-damaged protein M3Q_1782 PF14518 Iron-containing redox enzyme M3Q_1783 PF00199 Catalase M3Q_1783 PF06628 Catalase-related immune-responsive M3Q_1784 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_1786 PF10685 M3Q_1786 M3Q_1787 PF00717 Peptidase S24-like M3Q_1788 PF01810 M3Q_1788 M3Q_1789 PF01037 AsnC family M3Q_1789 PF13412 Winged helix-turn-helix DNA-binding M3Q_179 PF00155 Aminotransferase class I and II M3Q_179 PF00392 Bacterial regulatory proteins, gntR family M3Q_1791 PF00072 Response regulator receiver domain M3Q_1791 PF00512 His Kinase A (phospho-acceptor) domain M3Q_1791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_1792 PF00072 Response regulator receiver domain M3Q_1792 PF00196 Bacterial regulatory proteins, luxR family M3Q_1793 PF14542 GCN5-related N-acetyl-transferase M3Q_1794 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1795 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1796 PF00005 ABC transporter M3Q_1797 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_1798 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_1799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1799 PF03466 LysR substrate binding domain M3Q_18 PF03591 M3Q_18 M3Q_1800 PF01810 M3Q_1800 M3Q_1801 PF00266 Aminotransferase class-V M3Q_1803 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_1803 PF06426 Serine acetyltransferase, N-terminal M3Q_1804 PF00581 Rhodanese-like domain M3Q_1805 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_1806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1806 PF03466 LysR substrate binding domain M3Q_1807 PF00043 Glutathione S-transferase, C-terminal domain M3Q_1807 PF02798 Glutathione S-transferase, N-terminal domain M3Q_1808 PF13417 Glutathione S-transferase, N-terminal domain M3Q_1808 PF14834 Glutathione S-transferase, C-terminal domain M3Q_1809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1809 PF03466 LysR substrate binding domain M3Q_181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_181 PF03466 LysR substrate binding domain M3Q_1810 PF03788 M3Q_1810 M3Q_1811 PF04172 M3Q_1811 M3Q_1812 PF00155 Aminotransferase class I and II M3Q_1812 PF00392 Bacterial regulatory proteins, gntR family M3Q_1813 PF04299 Putative FMN-binding domain M3Q_1814 PF13302 Acetyltransferase (GNAT) domain M3Q_1815 PF07690 Major Facilitator Superfamily M3Q_1816 PF16957 M3Q_1816 M3Q_1817 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M3Q_1818 PF06857 M3Q_1818 M3Q_1819 PF01039 Carboxyl transferase domain M3Q_182 PF00248 Aldo/keto reductase family M3Q_1820 PF06833 Malonate decarboxylase gamma subunit (MdcE) M3Q_1821 PF10620 M3Q_1821 M3Q_1822 PF00698 Acyl transferase domain M3Q_1823 PF03817 M3Q_1823 M3Q_1824 PF03818 M3Q_1824 M3Q_1825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1825 PF03466 LysR substrate binding domain M3Q_1826 PF00155 Aminotransferase class I and II M3Q_1826 PF00392 Bacterial regulatory proteins, gntR family M3Q_1828 PF02322 M3Q_1828 M3Q_1829 PF01654 M3Q_1829 M3Q_183 PF07690 Major Facilitator Superfamily M3Q_1831 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1832 PF00296 Luciferase-like monooxygenase M3Q_1833 PF00083 Sugar (and other) transporter M3Q_1836 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M3Q_1837 PF00005 ABC transporter M3Q_1838 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1839 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M3Q_184 PF01852 START domain M3Q_1840 PF01177 Asp/Glu/Hydantoin racemase M3Q_1841 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M3Q_1841 PF07690 Major Facilitator Superfamily M3Q_1842 PF00501 AMP-binding enzyme M3Q_1843 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1843 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1844 PF00550 Phosphopantetheine attachment site M3Q_1845 PF00668 Condensation domain M3Q_1846 PF00501 AMP-binding enzyme M3Q_1846 PF00550 Phosphopantetheine attachment site M3Q_1846 PF00975 Thioesterase domain M3Q_1846 PF13193 AMP-binding enzyme C-terminal domain M3Q_1847 PF03176 MMPL family M3Q_1847 PF10604 Polyketide cyclase / dehydrase and lipid transport M3Q_1847 PF17131 M3Q_1847 M3Q_1849 PF01370 NAD dependent epimerase/dehydratase family M3Q_1849 PF12697 Alpha/beta hydrolase family M3Q_185 PF01113 Dihydrodipicolinate reductase, N-terminus M3Q_185 PF05173 Dihydrodipicolinate reductase, C-terminus M3Q_1850 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_1851 PF01722 BolA-like protein M3Q_1852 PF02811 PHP domain M3Q_1852 PF07733 Bacterial DNA polymerase III alpha subunit M3Q_1852 PF14579 Helix-hairpin-helix motif M3Q_1853 PF00710 Asparaginase M3Q_1854 PF00375 Sodium:dicarboxylate symporter family M3Q_1855 PF00155 Aminotransferase class I and II M3Q_1856 PF01641 SelR domain M3Q_1857 PF00255 Glutathione peroxidase M3Q_1858 PF02311 AraC-like ligand binding domain M3Q_1858 PF12833 Helix-turn-helix domain M3Q_1859 PF01810 M3Q_1859 M3Q_1860 PF00155 Aminotransferase class I and II M3Q_1861 PF01909 Nucleotidyltransferase domain M3Q_1861 PF01966 HD domain M3Q_1861 PF08335 GlnD PII-uridylyltransferase M3Q_1862 PF02222 ATP-grasp domain M3Q_1863 PF14552 Tautomerase enzyme M3Q_1864 PF05437 M3Q_1864 M3Q_1865 PF03591 M3Q_1865 M3Q_1868 PF00027 Cyclic nucleotide-binding domain M3Q_1868 PF13545 Crp-like helix-turn-helix domain M3Q_1869 PF06127 M3Q_1869 M3Q_187 PF00226 DnaJ domain M3Q_187 PF00684 DnaJ central domain M3Q_187 PF01556 DnaJ C terminal domain M3Q_1870 PF01926 50S ribosome-binding GTPase M3Q_1870 PF06071 Protein of unknown function (DUF933) M3Q_1871 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1872 PF00005 ABC transporter M3Q_1872 PF09383 NIL domain M3Q_1873 PF03180 NLPA lipoprotein M3Q_1876 PF03180 NLPA lipoprotein M3Q_1877 PF00296 Luciferase-like monooxygenase M3Q_1878 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1878 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1879 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_1879 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_1879 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_1880 PF13417 Glutathione S-transferase, N-terminal domain M3Q_1880 PF14497 Glutathione S-transferase, C-terminal domain M3Q_1881 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_1882 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1883 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1884 PF00005 ABC transporter M3Q_1886 PF01037 AsnC family M3Q_1886 PF13412 Winged helix-turn-helix DNA-binding M3Q_1887 PF01709 Transcriptional regulator M3Q_1888 PF01553 Acyltransferase M3Q_1889 PF00440 Bacterial regulatory proteins, tetR family M3Q_189 PF00873 AcrB/AcrD/AcrF family M3Q_1891 PF00589 Phage integrase family M3Q_1891 PF13356 Domain of unknown function (DUF4102) M3Q_1893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1893 PF03466 LysR substrate binding domain M3Q_1894 PF05232 M3Q_1894 M3Q_1895 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M3Q_1897 PF00892 EamA-like transporter family M3Q_1898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_1898 PF03466 LysR substrate binding domain M3Q_19 PF05437 M3Q_19 M3Q_190 PF16576 M3Q_190 M3Q_1900 PF00419 Fimbrial protein M3Q_1901 PF00577 Outer membrane usher protein M3Q_1901 PF13953 PapC C-terminal domain M3Q_1901 PF13954 PapC N-terminal domain M3Q_1902 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M3Q_1902 PF02753 Pili assembly chaperone PapD, C-terminal domain M3Q_1903 PF16970 M3Q_1903 M3Q_1906 PF04055 Radical SAM superfamily M3Q_1906 PF06968 Biotin and Thiamin Synthesis associated domain M3Q_1907 PF08331 M3Q_1907 M3Q_1907 PF13484 M3Q_1907 M3Q_1908 PF01256 Carbohydrate kinase M3Q_1908 PF03853 YjeF-related protein N-terminus M3Q_1909 PF02075 Crossover junction endodeoxyribonuclease RuvC M3Q_191 PF00440 Bacterial regulatory proteins, tetR family M3Q_191 PF14246 AefR-like transcriptional repressor, C-terminal region M3Q_1910 PF01381 Helix-turn-helix M3Q_1911 PF13420 Acetyltransferase (GNAT) domain M3Q_1912 PF00905 Penicillin binding protein transpeptidase domain M3Q_1913 PF04186 M3Q_1913 M3Q_1916 PF00438 S-adenosylmethionine synthetase, N-terminal domain M3Q_1916 PF02772 S-adenosylmethionine synthetase, central domain M3Q_1916 PF02773 S-adenosylmethionine synthetase, C-terminal domain M3Q_1917 PF00456 Transketolase, thiamine diphosphate binding domain M3Q_1917 PF02779 Transketolase, pyrimidine binding domain M3Q_1917 PF02780 Transketolase, C-terminal domain M3Q_1918 PF02566 OsmC-like protein M3Q_1919 PF04264 YceI-like domain M3Q_192 PF00311 Phosphoenolpyruvate carboxylase M3Q_1920 PF04970 Lecithin retinol acyltransferase M3Q_1921 PF09992 Predicted periplasmic protein (DUF2233) M3Q_1923 PF05958 tRNA (Uracil-5-)-methyltransferase M3Q_1924 PF04229 GrpB protein M3Q_1925 PF00171 Aldehyde dehydrogenase family M3Q_1925 PF01619 Proline dehydrogenase M3Q_1925 PF14850 DNA-binding domain of Proline dehydrogenase M3Q_1926 PF01037 AsnC family M3Q_1926 PF13404 AsnC-type helix-turn-helix domain M3Q_1927 PF00474 Sodium:solute symporter family M3Q_1928 PF02146 Sir2 family M3Q_1929 PF01597 Glycine cleavage H-protein M3Q_193 PF00860 Permease family M3Q_1930 PF12625 M3Q_1930 M3Q_1930 PF12833 Helix-turn-helix domain M3Q_1931 PF01575 MaoC like domain M3Q_1932 PF00005 ABC transporter M3Q_1932 PF00664 ABC transporter transmembrane region M3Q_1933 PF13354 Beta-lactamase enzyme family M3Q_1934 PF09831 M3Q_1934 M3Q_1935 PF06912 M3Q_1935 M3Q_1936 PF00375 Sodium:dicarboxylate symporter family M3Q_1937 PF01022 Bacterial regulatory protein, arsR family M3Q_1938 PF00440 Bacterial regulatory proteins, tetR family M3Q_1939 PF08007 Cupin superfamily protein M3Q_194 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_194 PF03466 LysR substrate binding domain M3Q_1940 PF02545 Maf-like protein M3Q_1941 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) M3Q_1942 PF00162 Phosphoglycerate kinase M3Q_1944 PF01116 Fructose-bisphosphate aldolase class-II M3Q_1945 PF00639 PPIC-type PPIASE domain M3Q_1945 PF09312 SurA N-terminal domain M3Q_1945 PF13616 PPIC-type PPIASE domain M3Q_1946 PF03968 OstA-like protein M3Q_1946 PF04453 Organic solvent tolerance protein M3Q_1947 PF01636 Phosphotransferase enzyme family M3Q_1948 PF00483 Nucleotidyl transferase M3Q_1949 PF02527 rRNA small subunit methyltransferase G M3Q_195 PF01925 M3Q_195 M3Q_1950 PF13614 AAA domain M3Q_1951 PF02195 ParB-like nuclease domain M3Q_1952 PF01618 M3Q_1952 M3Q_1953 PF02472 Biopolymer transport protein ExbD/TolR M3Q_1954 PF00005 ABC transporter M3Q_1954 PF00664 ABC transporter transmembrane region M3Q_1955 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M3Q_1956 PF02348 Cytidylyltransferase M3Q_1957 PF13177 DNA polymerase III, delta subunit M3Q_1958 PF07238 PilZ domain M3Q_1959 PF01026 TatD related DNase M3Q_1960 PF00440 Bacterial regulatory proteins, tetR family M3Q_1961 PF07963 Prokaryotic N-terminal methylation motif M3Q_1962 PF02501 Type II secretion system (T2SS), protein I M3Q_1962 PF07963 Prokaryotic N-terminal methylation motif M3Q_1963 PF07963 Prokaryotic N-terminal methylation motif M3Q_1963 PF11612 Type II secretion system (T2SS), protein J M3Q_1964 PF03934 Type II secretion system (T2SS), protein K M3Q_1965 PF01242 6-pyruvoyl tetrahydropterin synthase M3Q_1966 PF03167 Uracil DNA glycosylase superfamily M3Q_1967 PF16113 M3Q_1967 M3Q_1968 PF14437 M3Q_1968 M3Q_1969 PF10604 Polyketide cyclase / dehydrase and lipid transport M3Q_197 PF00920 Dehydratase family M3Q_1970 PF02224 Cytidylate kinase M3Q_1971 PF00575 S1 RNA binding domain M3Q_1972 PF00216 Bacterial DNA-binding protein M3Q_1973 PF06305 M3Q_1973 M3Q_1974 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M3Q_1975 PF03956 M3Q_1975 M3Q_1976 PF00743 Flavin-binding monooxygenase-like M3Q_1977 PF12625 M3Q_1977 M3Q_1977 PF12833 Helix-turn-helix domain M3Q_1978 PF03969 AFG1-like ATPase M3Q_1979 PF01274 Malate synthase M3Q_198 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3Q_1980 PF00583 Acetyltransferase (GNAT) family M3Q_1981 PF02472 Biopolymer transport protein ExbD/TolR M3Q_1982 PF02472 Biopolymer transport protein ExbD/TolR M3Q_1983 PF01618 M3Q_1983 M3Q_1984 PF03544 Gram-negative bacterial TonB protein C-terminal M3Q_1985 PF00593 TonB dependent receptor M3Q_1985 PF07715 TonB-dependent Receptor Plug Domain M3Q_1987 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3Q_1988 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M3Q_1989 PF01432 Peptidase family M3 M3Q_199 PF07859 alpha/beta hydrolase fold M3Q_1990 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1991 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_1991 PF12911 M3Q_1991 M3Q_1992 PF00005 ABC transporter M3Q_1992 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M3Q_1993 PF02586 Uncharacterised ACR, COG2135 M3Q_1995 PF00459 Inositol monophosphatase family M3Q_1996 PF00300 Histidine phosphatase superfamily (branch 1) M3Q_1997 PF01649 Ribosomal protein S20 M3Q_1998 PF01118 Semialdehyde dehydrogenase, NAD binding domain M3Q_1999 PF03737 Demethylmenaquinone methyltransferase M3Q_20 PF00436 Single-strand binding protein family M3Q_2000 PF13417 Glutathione S-transferase, N-terminal domain M3Q_2001 PF04261 Dyp-type peroxidase family M3Q_2003 PF00270 DEAD/DEAH box helicase M3Q_2003 PF00271 Helicase conserved C-terminal domain M3Q_2003 PF02559 CarD-like/TRCF domain M3Q_2003 PF03461 TRCF domain M3Q_2004 PF01230 HIT domain M3Q_2005 PF00211 Adenylate and Guanylate cyclase catalytic domain M3Q_2006 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2007 PF00012 Hsp70 protein M3Q_2008 PF00226 DnaJ domain M3Q_2008 PF07743 HSCB C-terminal oligomerisation domain M3Q_2009 PF01521 Iron-sulphur cluster biosynthesis M3Q_2010 PF01592 NifU-like N terminal domain M3Q_2011 PF00266 Aminotransferase class-V M3Q_2012 PF02082 Transcriptional regulator M3Q_2014 PF05597 M3Q_2014 M3Q_2015 PF00216 Bacterial DNA-binding protein M3Q_2016 PF13616 PPIC-type PPIASE domain M3Q_2016 PF13624 SurA N-terminal domain M3Q_2017 PF12833 Helix-turn-helix domain M3Q_2017 PF12852 Cupin M3Q_2018 PF00487 M3Q_2018 M3Q_2019 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2019 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2021 PF03109 M3Q_2021 M3Q_2023 PF04073 Aminoacyl-tRNA editing domain M3Q_2024 PF04183 IucA / IucC family M3Q_2024 PF06276 Ferric iron reductase FhuF-like transporter M3Q_2025 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M3Q_2026 PF07690 Major Facilitator Superfamily M3Q_2027 PF04183 IucA / IucC family M3Q_2027 PF06276 Ferric iron reductase FhuF-like transporter M3Q_2028 PF04183 IucA / IucC family M3Q_2028 PF06276 Ferric iron reductase FhuF-like transporter M3Q_2029 PF11575 M3Q_2029 M3Q_203 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_203 PF03466 LysR substrate binding domain M3Q_2030 PF03737 Demethylmenaquinone methyltransferase M3Q_2031 PF00593 TonB dependent receptor M3Q_2031 PF07715 TonB-dependent Receptor Plug Domain M3Q_2033 PF03929 M3Q_2033 M3Q_2035 PF13523 Acetyltransferase (GNAT) domain M3Q_2036 PF08125 Mannitol dehydrogenase C-terminal domain M3Q_2036 PF13419 Haloacid dehalogenase-like hydrolase M3Q_2037 PF13563 2'-5' RNA ligase superfamily M3Q_2038 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M3Q_2039 PF02277 Phosphoribosyltransferase M3Q_204 PF01025 GrpE M3Q_2040 PF00300 Histidine phosphatase superfamily (branch 1) M3Q_2041 PF00328 Histidine phosphatase superfamily (branch 2) M3Q_2042 PF02654 M3Q_2042 M3Q_2043 PF00793 DAHP synthetase I family M3Q_2044 PF01925 M3Q_2044 M3Q_2046 PF03929 M3Q_2046 M3Q_2048 PF00593 TonB dependent receptor M3Q_2048 PF07715 TonB-dependent Receptor Plug Domain M3Q_2049 PF02684 M3Q_2049 M3Q_205 PF00012 Hsp70 protein M3Q_2050 PF00440 Bacterial regulatory proteins, tetR family M3Q_2050 PF09209 Domain of unknown function (DUF1956) M3Q_2051 PF13437 HlyD family secretion protein M3Q_2051 PF13533 Biotin-lipoyl like M3Q_2052 PF00005 ABC transporter M3Q_2053 PF12698 ABC-2 family transporter protein M3Q_2054 PF12698 ABC-2 family transporter protein M3Q_2055 PF10977 M3Q_2055 M3Q_2057 PF06078 Bacterial protein of unknown function (DUF937) M3Q_2058 PF13609 Gram-negative porin M3Q_2059 PF01230 HIT domain M3Q_206 PF00413 Matrixin M3Q_2060 PF13308 YARHG domain M3Q_2061 PF04828 Glutathione-dependent formaldehyde-activating enzyme M3Q_2064 PF13103 TonB C terminal M3Q_2065 PF08241 Methyltransferase domain M3Q_2066 PF00561 alpha/beta hydrolase fold M3Q_2067 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_2069 PF02575 YbaB/EbfC DNA-binding family M3Q_207 PF00413 Matrixin M3Q_2070 PF02132 RecR protein M3Q_2070 PF13662 Toprim domain M3Q_2071 PF00570 HRDC domain M3Q_2071 PF01612 3'-5' exonuclease M3Q_2075 PF05166 YcgL domain M3Q_2077 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_2078 PF05762 VWA domain containing CoxE-like protein M3Q_2079 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_2080 PF05175 Methyltransferase small domain M3Q_2081 PF01264 Chorismate synthase M3Q_2082 PF00990 GGDEF domain M3Q_2083 PF14518 Iron-containing redox enzyme M3Q_2085 PF04055 Radical SAM superfamily M3Q_2086 PF00676 Dehydrogenase E1 component M3Q_2087 PF02779 Transketolase, pyrimidine binding domain M3Q_2087 PF02780 Transketolase, C-terminal domain M3Q_2088 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_2088 PF00364 Biotin-requiring enzyme M3Q_2088 PF02817 e3 binding domain M3Q_2089 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_2089 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_209 PF01471 Putative peptidoglycan binding domain M3Q_209 PF13406 Transglycosylase SLT domain M3Q_2090 PF00106 short chain dehydrogenase M3Q_2091 PF00107 Zinc-binding dehydrogenase M3Q_2091 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2092 PF01062 M3Q_2092 M3Q_2093 PF00158 Sigma-54 interaction domain M3Q_2093 PF02954 Bacterial regulatory protein, Fis family M3Q_2094 PF00753 Metallo-beta-lactamase superfamily M3Q_2095 PF04273 Putative phosphatase (DUF442) M3Q_2095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2096 PF01925 M3Q_2096 M3Q_2097 PF00742 Homoserine dehydrogenase M3Q_2097 PF03447 Homoserine dehydrogenase, NAD binding domain M3Q_2098 PF00892 EamA-like transporter family M3Q_2099 PF12833 Helix-turn-helix domain M3Q_21 PF07690 Major Facilitator Superfamily M3Q_210 PF02222 ATP-grasp domain M3Q_2100 PF01638 HxlR-like helix-turn-helix M3Q_2101 PF02525 Flavodoxin-like fold M3Q_2102 PF02417 M3Q_2102 M3Q_2103 PF07702 UTRA domain M3Q_2104 PF00890 FAD binding domain M3Q_2104 PF02910 Fumarate reductase flavoprotein C-term M3Q_2105 PF12838 4Fe-4S dicluster domain M3Q_2106 PF13379 NMT1-like family M3Q_2107 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2108 PF00005 ABC transporter M3Q_2109 PF13646 HEAT repeats M3Q_211 PF00731 AIR carboxylase M3Q_2110 PF06155 Protein of unknown function (DUF971) M3Q_2111 PF00083 Sugar (and other) transporter M3Q_2111 PF07690 Major Facilitator Superfamily M3Q_2112 PF00593 TonB dependent receptor M3Q_2112 PF07715 TonB-dependent Receptor Plug Domain M3Q_2113 PF00206 Lyase M3Q_2113 PF10415 Fumarase C C-terminus M3Q_2116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2116 PF03466 LysR substrate binding domain M3Q_2117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2117 PF03466 LysR substrate binding domain M3Q_2118 PF00108 Thiolase, N-terminal domain M3Q_2118 PF02803 Thiolase, C-terminal domain M3Q_2119 PF02667 M3Q_2119 M3Q_212 PF04342 M3Q_212 M3Q_2120 PF01144 Coenzyme A transferase M3Q_2121 PF01144 Coenzyme A transferase M3Q_2122 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2122 PF03466 LysR substrate binding domain M3Q_2124 PF02447 M3Q_2124 M3Q_2125 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_2127 PF01609 Transposase DDE domain M3Q_2128 PF12833 Helix-turn-helix domain M3Q_2128 PF14525 M3Q_2128 M3Q_2129 PF07690 Major Facilitator Superfamily M3Q_213 PF01225 Mur ligase family, catalytic domain M3Q_213 PF02875 Mur ligase family, glutamate ligase domain M3Q_213 PF08245 Mur ligase middle domain M3Q_2130 PF01738 Dienelactone hydrolase family M3Q_2131 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_2133 PF01613 Flavin reductase like domain M3Q_2134 PF13557 M3Q_2134 M3Q_2135 PF12833 Helix-turn-helix domain M3Q_2135 PF14525 M3Q_2135 M3Q_2136 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2136 PF00175 Oxidoreductase NAD-binding domain M3Q_2136 PF00970 Oxidoreductase FAD-binding domain M3Q_2137 PF00866 Ring hydroxylating beta subunit M3Q_2138 PF00355 Rieske [2Fe-2S] domain M3Q_2138 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_2139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_214 PF06772 M3Q_214 M3Q_2140 PF13531 Bacterial extracellular solute-binding protein M3Q_2141 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2142 PF00005 ABC transporter M3Q_2143 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_2144 PF00857 Isochorismatase family M3Q_2145 PF01475 Ferric uptake regulator family M3Q_2146 PF00149 Calcineurin-like phosphoesterase M3Q_2146 PF02872 5'-nucleotidase, C-terminal domain M3Q_2147 PF02503 Polyphosphate kinase middle domain M3Q_2147 PF13089 Polyphosphate kinase N-terminal domain M3Q_2147 PF13090 Polyphosphate kinase C-terminal domain M3Q_2148 PF12706 Beta-lactamase superfamily domain M3Q_2149 PF03070 TENA/THI-4/PQQC family M3Q_215 PF01569 PAP2 superfamily M3Q_2150 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M3Q_2151 PF04055 Radical SAM superfamily M3Q_2151 PF13186 Iron-sulfur cluster-binding domain M3Q_2151 PF13353 4Fe-4S single cluster domain M3Q_2152 PF01244 Membrane dipeptidase (Peptidase family M19) M3Q_2156 PF13091 PLD-like domain M3Q_2159 PF00199 Catalase M3Q_216 PF03741 M3Q_216 M3Q_2161 PF00107 Zinc-binding dehydrogenase M3Q_2161 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2162 PF16223 M3Q_2162 M3Q_2163 PF00419 Fimbrial protein M3Q_2164 PF00577 Outer membrane usher protein M3Q_2164 PF13953 PapC C-terminal domain M3Q_2164 PF13954 PapC N-terminal domain M3Q_2165 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M3Q_2165 PF02753 Pili assembly chaperone PapD, C-terminal domain M3Q_2166 PF01609 Transposase DDE domain M3Q_2168 PF16970 M3Q_2168 M3Q_2172 PF01266 FAD dependent oxidoreductase M3Q_2173 PF00440 Bacterial regulatory proteins, tetR family M3Q_2174 PF03435 Saccharopine dehydrogenase M3Q_2175 PF01593 Flavin containing amine oxidoreductase M3Q_2176 PF13738 Pyridine nucleotide-disulphide oxidoreductase M3Q_2177 PF12146 Putative lysophospholipase M3Q_2178 PF02321 Outer membrane efflux protein M3Q_2179 PF00873 AcrB/AcrD/AcrF family M3Q_218 PF03738 Glutathionylspermidine synthase preATP-grasp M3Q_2180 PF16576 M3Q_2180 M3Q_2181 PF00072 Response regulator receiver domain M3Q_2181 PF00486 Transcriptional regulatory protein, C terminal M3Q_2182 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2184 PF12625 M3Q_2184 M3Q_2184 PF12833 Helix-turn-helix domain M3Q_2185 PF12146 Putative lysophospholipase M3Q_2186 PF00106 short chain dehydrogenase M3Q_2187 PF00106 short chain dehydrogenase M3Q_2189 PF05488 PAAR motif M3Q_219 PF00285 Citrate synthase M3Q_2192 PF03374 M3Q_2192 M3Q_2194 PF00440 Bacterial regulatory proteins, tetR family M3Q_2195 PF01381 Helix-turn-helix M3Q_2196 PF13328 HD domain M3Q_2198 PF01975 Survival protein SurE M3Q_22 PF04332 M3Q_22 M3Q_220 PF00712 DNA polymerase III beta subunit, N-terminal domain M3Q_220 PF02767 DNA polymerase III beta subunit, central domain M3Q_220 PF02768 DNA polymerase III beta subunit, C-terminal domain M3Q_2200 PF02321 Outer membrane efflux protein M3Q_2201 PF03321 GH3 auxin-responsive promoter M3Q_2203 PF07690 Major Facilitator Superfamily M3Q_2204 PF13437 HlyD family secretion protein M3Q_2204 PF13533 Biotin-lipoyl like M3Q_2205 PF01425 Amidase M3Q_2206 PF00196 Bacterial regulatory proteins, luxR family M3Q_221 PF00308 Bacterial dnaA protein M3Q_221 PF08299 Bacterial dnaA protein helix-turn-helix M3Q_221 PF11638 DnaA N-terminal domain M3Q_2218 PF02219 Methylenetetrahydrofolate reductase M3Q_2218 PF12225 M3Q_2218 M3Q_2219 PF00293 NUDIX domain M3Q_222 PF00468 Ribosomal protein L34 M3Q_2220 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M3Q_2221 PF00156 Phosphoribosyl transferase domain M3Q_2222 PF01925 M3Q_2222 M3Q_2223 PF02311 AraC-like ligand binding domain M3Q_2223 PF12833 Helix-turn-helix domain M3Q_2224 PF00583 Acetyltransferase (GNAT) family M3Q_2225 PF00005 ABC transporter M3Q_2226 PF01032 FecCD transport family M3Q_2227 PF01497 Periplasmic binding protein M3Q_2228 PF00107 Zinc-binding dehydrogenase M3Q_2228 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2229 PF02627 Carboxymuconolactone decarboxylase family M3Q_223 PF00825 Ribonuclease P M3Q_2230 PF07883 Cupin domain M3Q_2231 PF06719 M3Q_2231 M3Q_2231 PF12833 Helix-turn-helix domain M3Q_2232 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M3Q_2232 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M3Q_2233 PF07690 Major Facilitator Superfamily M3Q_2234 PF01370 NAD dependent epimerase/dehydratase family M3Q_2235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2235 PF03466 LysR substrate binding domain M3Q_2236 PF01557 Fumarylacetoacetate (FAA) hydrolase family M3Q_2237 PF00920 Dehydratase family M3Q_2238 PF00171 Aldehyde dehydrogenase family M3Q_2239 PF00440 Bacterial regulatory proteins, tetR family M3Q_2239 PF14246 AefR-like transcriptional repressor, C-terminal region M3Q_224 PF01809 M3Q_224 M3Q_2240 PF07690 Major Facilitator Superfamily M3Q_2241 PF13437 HlyD family secretion protein M3Q_2241 PF13533 Biotin-lipoyl like M3Q_2242 PF00353 Hemolysin-type calcium-binding repeat (2 copies) M3Q_2245 PF03737 Demethylmenaquinone methyltransferase M3Q_2246 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_2246 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_2247 PF07690 Major Facilitator Superfamily M3Q_2248 PF01614 Bacterial transcriptional regulator M3Q_2248 PF09339 IclR helix-turn-helix domain M3Q_2249 PF04657 M3Q_2249 M3Q_225 PF02096 60Kd inner membrane protein M3Q_225 PF14849 YidC periplasmic domain M3Q_2250 PF04657 M3Q_2250 M3Q_2251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2251 PF03466 LysR substrate binding domain M3Q_2252 PF07690 Major Facilitator Superfamily M3Q_2253 PF08450 SMP-30/Gluconolaconase/LRE-like region M3Q_2254 PF00392 Bacterial regulatory proteins, gntR family M3Q_2254 PF07702 UTRA domain M3Q_2255 PF07158 M3Q_2255 M3Q_2256 PF04909 Amidohydrolase M3Q_2257 PF07690 Major Facilitator Superfamily M3Q_226 PF01926 50S ribosome-binding GTPase M3Q_226 PF10396 GTP-binding protein TrmE N-terminus M3Q_226 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE M3Q_2260 PF04829 M3Q_2260 M3Q_2260 PF04830 M3Q_2260 M3Q_2260 PF05860 haemagglutination activity domain M3Q_2260 PF13018 M3Q_2260 M3Q_2261 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M3Q_2261 PF08479 POTRA domain, ShlB-type M3Q_2261 PF17287 M3Q_2261 M3Q_2262 PF00440 Bacterial regulatory proteins, tetR family M3Q_2263 PF01546 Peptidase family M20/M25/M40 M3Q_2263 PF07687 Peptidase dimerisation domain M3Q_2265 PF00999 Sodium/hydrogen exchanger family M3Q_2265 PF02254 TrkA-N domain M3Q_2266 PF07995 Glucose / Sorbosone dehydrogenase M3Q_2267 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2267 PF03466 LysR substrate binding domain M3Q_2268 PF00857 Isochorismatase family M3Q_2269 PF03992 Antibiotic biosynthesis monooxygenase M3Q_227 PF02583 Metal-sensitive transcriptional repressor M3Q_2270 PF00440 Bacterial regulatory proteins, tetR family M3Q_2271 PF12706 Beta-lactamase superfamily domain M3Q_2272 PF02082 Transcriptional regulator M3Q_2273 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2274 PF01965 DJ-1/PfpI family M3Q_2275 PF13411 MerR HTH family regulatory protein M3Q_2276 PF01872 RibD C-terminal domain M3Q_2277 PF03435 Saccharopine dehydrogenase M3Q_2278 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_2279 PF01047 MarR family M3Q_228 PF01545 Cation efflux family M3Q_2280 PF07859 alpha/beta hydrolase fold M3Q_2281 PF01965 DJ-1/PfpI family M3Q_2283 PF00199 Catalase M3Q_2283 PF06628 Catalase-related immune-responsive M3Q_2284 PF00561 alpha/beta hydrolase fold M3Q_2285 PF06314 Acetoacetate decarboxylase (ADC) M3Q_2286 PF00171 Aldehyde dehydrogenase family M3Q_2287 PF00107 Zinc-binding dehydrogenase M3Q_2287 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2288 PF00474 Sodium:solute symporter family M3Q_2289 PF04341 M3Q_2289 M3Q_229 PF10411 Disulfide bond isomerase protein N-terminus M3Q_229 PF13098 Thioredoxin-like domain M3Q_2290 PF00501 AMP-binding enzyme M3Q_2290 PF13193 AMP-binding enzyme C-terminal domain M3Q_2291 PF00158 Sigma-54 interaction domain M3Q_2291 PF02954 Bacterial regulatory protein, Fis family M3Q_2291 PF06506 Propionate catabolism activator M3Q_2292 PF00106 short chain dehydrogenase M3Q_2293 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2293 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2293 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2294 PF00300 Histidine phosphatase superfamily (branch 1) M3Q_2296 PF01636 Phosphotransferase enzyme family M3Q_2297 PF00171 Aldehyde dehydrogenase family M3Q_2299 PF07690 Major Facilitator Superfamily M3Q_23 PF03070 TENA/THI-4/PQQC family M3Q_230 PF04226 M3Q_230 M3Q_2300 PF00920 Dehydratase family M3Q_2301 PF00392 Bacterial regulatory proteins, gntR family M3Q_2301 PF07729 FCD domain M3Q_2302 PF09694 M3Q_2302 M3Q_2303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2303 PF03466 LysR substrate binding domain M3Q_2304 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M3Q_2304 PF13378 Enolase C-terminal domain-like M3Q_2305 PF02426 Muconolactone delta-isomerase M3Q_2306 PF00775 Dioxygenase M3Q_2306 PF04444 Catechol dioxygenase N terminus M3Q_2307 PF01144 Coenzyme A transferase M3Q_2308 PF01144 Coenzyme A transferase M3Q_2309 PF00108 Thiolase, N-terminal domain M3Q_2309 PF02803 Thiolase, C-terminal domain M3Q_231 PF00156 Phosphoribosyl transferase domain M3Q_2310 PF00561 alpha/beta hydrolase fold M3Q_2311 PF01804 Penicillin amidase M3Q_2312 PF00171 Aldehyde dehydrogenase family M3Q_2314 PF01179 Copper amine oxidase, enzyme domain M3Q_2314 PF02727 Copper amine oxidase, N2 domain M3Q_2314 PF02728 Copper amine oxidase, N3 domain M3Q_2314 PF07833 Copper amine oxidase N-terminal domain M3Q_2315 PF12833 Helix-turn-helix domain M3Q_2315 PF14525 M3Q_2315 M3Q_2316 PF01613 Flavin reductase like domain M3Q_2317 PF00111 2Fe-2S iron-sulfur cluster binding domain M3Q_2317 PF00175 Oxidoreductase NAD-binding domain M3Q_2317 PF00970 Oxidoreductase FAD-binding domain M3Q_2318 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_2319 PF00866 Ring hydroxylating beta subunit M3Q_2320 PF00355 Rieske [2Fe-2S] domain M3Q_2320 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_2321 PF13577 SnoaL-like domain M3Q_2323 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2323 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2324 PF01425 Amidase M3Q_2325 PF01047 MarR family M3Q_2326 PF07690 Major Facilitator Superfamily M3Q_2327 PF03573 outer membrane porin, OprD family M3Q_2328 PF00106 short chain dehydrogenase M3Q_2329 PF00300 Histidine phosphatase superfamily (branch 1) M3Q_233 PF01979 Amidohydrolase family M3Q_2330 PF01636 Phosphotransferase enzyme family M3Q_2331 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2331 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2331 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2332 PF03466 LysR substrate binding domain M3Q_2333 PF01614 Bacterial transcriptional regulator M3Q_2333 PF09339 IclR helix-turn-helix domain M3Q_2334 PF00753 Metallo-beta-lactamase superfamily M3Q_2335 PF04143 M3Q_2335 M3Q_2336 PF04143 M3Q_2336 M3Q_2338 PF01011 PQQ enzyme repeat M3Q_2339 PF04966 Carbohydrate-selective porin, OprB family M3Q_234 PF00355 Rieske [2Fe-2S] domain M3Q_2340 PF13229 Right handed beta helix region M3Q_2341 PF01487 Type I 3-dehydroquinase M3Q_2342 PF00775 Dioxygenase M3Q_2343 PF00775 Dioxygenase M3Q_2343 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M3Q_2344 PF02627 Carboxymuconolactone decarboxylase family M3Q_2345 PF07690 Major Facilitator Superfamily M3Q_2346 PF00561 alpha/beta hydrolase fold M3Q_2347 PF00206 Lyase M3Q_2347 PF10397 Adenylosuccinate lyase C-terminus M3Q_2348 PF00108 Thiolase, N-terminal domain M3Q_2348 PF02803 Thiolase, C-terminal domain M3Q_2349 PF01144 Coenzyme A transferase M3Q_235 PF03738 Glutathionylspermidine synthase preATP-grasp M3Q_2350 PF01144 Coenzyme A transferase M3Q_2351 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M3Q_2352 PF04977 Septum formation initiator M3Q_2353 PF04239 Protein of unknown function (DUF421) M3Q_2354 PF00113 Enolase, C-terminal TIM barrel domain M3Q_2354 PF03952 Enolase, N-terminal domain M3Q_2355 PF00793 DAHP synthetase I family M3Q_2356 PF00117 Glutamine amidotransferase class-I M3Q_2356 PF06418 CTP synthase N-terminus M3Q_2358 PF10118 M3Q_2358 M3Q_2359 PF12146 Putative lysophospholipase M3Q_236 PF02463 RecF/RecN/SMC N terminal domain M3Q_2360 PF13472 GDSL-like Lipase/Acylhydrolase family M3Q_2361 PF12680 SnoaL-like domain M3Q_2362 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_2362 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2363 PF03551 Transcriptional regulator PadR-like family M3Q_2363 PF10400 Virulence activator alpha C-term M3Q_2364 PF12697 Alpha/beta hydrolase family M3Q_2365 PF00793 DAHP synthetase I family M3Q_2366 PF02694 M3Q_2366 M3Q_2367 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_2367 PF02861 Clp amino terminal domain M3Q_2367 PF07724 AAA domain (Cdc48 subfamily) M3Q_2367 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_2368 PF02617 ATP-dependent Clp protease adaptor protein ClpS M3Q_237 PF00204 DNA gyrase B M3Q_237 PF00986 DNA gyrase B subunit, carboxyl terminus M3Q_237 PF01751 Toprim domain M3Q_237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2370 PF01118 Semialdehyde dehydrogenase, NAD binding domain M3Q_2370 PF02774 Semialdehyde dehydrogenase, dimerisation domain M3Q_2372 PF01863 Protein of unknown function DUF45 M3Q_2373 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M3Q_2374 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_2374 PF00585 C-terminal regulatory domain of Threonine dehydratase M3Q_2375 PF02254 TrkA-N domain M3Q_2376 PF02386 Cation transport protein M3Q_2377 PF02253 Phospholipase A1 M3Q_2378 PF00675 Insulinase (Peptidase family M16) M3Q_2378 PF05193 Peptidase M16 inactive domain M3Q_2378 PF08367 Peptidase M16C associated M3Q_2379 PF00593 TonB dependent receptor M3Q_2379 PF07715 TonB-dependent Receptor Plug Domain M3Q_238 PF07361 Cytochrome b562 M3Q_2380 PF00294 pfkB family carbohydrate kinase M3Q_2381 PF00355 Rieske [2Fe-2S] domain M3Q_2382 PF07290 M3Q_2382 M3Q_2384 PF01654 M3Q_2384 M3Q_2385 PF02322 M3Q_2385 M3Q_2386 PF08173 M3Q_2386 M3Q_2387 PF09600 M3Q_2387 M3Q_2388 PF00583 Acetyltransferase (GNAT) family M3Q_2389 PF09829 M3Q_2389 M3Q_239 PF09335 M3Q_239 M3Q_2390 PF00881 Nitroreductase family M3Q_2391 PF00448 SRP54-type protein, GTPase domain M3Q_2391 PF02881 SRP54-type protein, helical bundle domain M3Q_2395 PF11042 M3Q_2395 M3Q_2396 PF00571 CBS domain M3Q_2397 PF00202 Aminotransferase class-III M3Q_2398 PF00462 Glutaredoxin M3Q_24 PF06942 M3Q_24 M3Q_240 PF00005 ABC transporter M3Q_240 PF12848 ABC transporter M3Q_2400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2400 PF03466 LysR substrate binding domain M3Q_2401 PF00557 Metallopeptidase family M24 M3Q_2402 PF05525 M3Q_2402 M3Q_2403 PF03928 Domain of unknown function (DUF336) M3Q_2406 PF12146 Putative lysophospholipase M3Q_2407 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M3Q_2407 PF00381 PTS HPr component phosphorylation site M3Q_2407 PF00391 PEP-utilising enzyme, mobile domain M3Q_2407 PF02896 PEP-utilising enzyme, TIM barrel domain M3Q_2407 PF05524 PEP-utilising enzyme, N-terminal M3Q_2408 PF00294 pfkB family carbohydrate kinase M3Q_2409 PF00294 pfkB family carbohydrate kinase M3Q_2410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M3Q_2410 PF02378 Phosphotransferase system, EIIC M3Q_2413 PF01047 MarR family M3Q_2415 PF00563 EAL domain M3Q_2415 PF00990 GGDEF domain M3Q_2415 PF08447 PAS fold M3Q_2415 PF08448 PAS fold M3Q_2416 PF00582 Universal stress protein family M3Q_2417 PF07995 Glucose / Sorbosone dehydrogenase M3Q_2418 PF02586 Uncharacterised ACR, COG2135 M3Q_2419 PF00916 M3Q_2419 M3Q_2419 PF01740 STAS domain M3Q_2420 PF00082 Subtilase family M3Q_2420 PF05922 Peptidase inhibitor I9 M3Q_2421 PF07859 alpha/beta hydrolase fold M3Q_2422 PF00324 Amino acid permease M3Q_2423 PF00266 Aminotransferase class-V M3Q_2424 PF01037 AsnC family M3Q_2424 PF13412 Winged helix-turn-helix DNA-binding M3Q_2425 PF13302 Acetyltransferase (GNAT) domain M3Q_2428 PF05666 M3Q_2428 M3Q_2429 PF13419 Haloacid dehalogenase-like hydrolase M3Q_2430 PF01479 S4 domain M3Q_2431 PF00154 recA bacterial DNA recombination protein M3Q_2432 PF02631 RecX family M3Q_2433 PF13174 Tetratricopeptide repeat M3Q_2433 PF16331 M3Q_2433 M3Q_2434 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2434 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M3Q_2435 PF07977 FabA-like domain M3Q_2436 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2436 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M3Q_2436 PF14602 Hexapeptide repeat of succinyl-transferase M3Q_2437 PF03938 Outer membrane protein (OmpH-like) M3Q_2438 PF01103 Surface antigen M3Q_2438 PF07244 Surface antigen variable number repeat M3Q_2439 PF02163 Peptidase family M50 M3Q_2439 PF13180 PDZ domain M3Q_244 PF01521 Iron-sulphur cluster biosynthesis M3Q_2440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M3Q_2440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal M3Q_2440 PF13288 DXP reductoisomerase C-terminal domain M3Q_2441 PF01148 Cytidylyltransferase family M3Q_2442 PF01255 Putative undecaprenyl diphosphate synthase M3Q_2443 PF01765 Ribosome recycling factor M3Q_2444 PF00696 Amino acid kinase family M3Q_2445 PF00919 Uncharacterized protein family UPF0004 M3Q_2445 PF04055 Radical SAM superfamily M3Q_2446 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2446 PF00989 PAS fold M3Q_2446 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2447 PF00072 Response regulator receiver domain M3Q_2447 PF00158 Sigma-54 interaction domain M3Q_2447 PF02954 Bacterial regulatory protein, Fis family M3Q_2448 PF00440 Bacterial regulatory proteins, tetR family M3Q_2449 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M3Q_2449 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M3Q_245 PF00561 alpha/beta hydrolase fold M3Q_2451 PF02542 YgbB family M3Q_2453 PF01266 FAD dependent oxidoreductase M3Q_2457 PF00206 Lyase M3Q_2457 PF10415 Fumarase C C-terminus M3Q_2458 PF01370 NAD dependent epimerase/dehydratase family M3Q_2459 PF02635 DsrE/DsrF-like family M3Q_246 PF03702 Uncharacterised protein family (UPF0075) M3Q_2462 PF04358 DsrC like protein M3Q_2463 PF00892 EamA-like transporter family M3Q_2464 PF00155 Aminotransferase class I and II M3Q_2464 PF00392 Bacterial regulatory proteins, gntR family M3Q_2465 PF01638 HxlR-like helix-turn-helix M3Q_2466 PF00994 Probable molybdopterin binding domain M3Q_2466 PF03453 MoeA N-terminal region (domain I and II) M3Q_2466 PF03454 MoeA C-terminal region (domain IV) M3Q_2467 PF00994 Probable molybdopterin binding domain M3Q_2467 PF01967 MoaC family M3Q_2468 PF02391 MoaE protein M3Q_2469 PF02597 ThiS family M3Q_247 PF00579 tRNA synthetases class I (W and Y) M3Q_2470 PF04055 Radical SAM superfamily M3Q_2470 PF06463 Molybdenum Cofactor Synthesis C M3Q_2470 PF13353 4Fe-4S single cluster domain M3Q_2471 PF00384 Molybdopterin oxidoreductase M3Q_2471 PF01568 Molydopterin dinucleotide binding domain M3Q_2471 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M3Q_2472 PF12804 MobA-like NTP transferase domain M3Q_2473 PF00384 Molybdopterin oxidoreductase M3Q_2473 PF01568 Molydopterin dinucleotide binding domain M3Q_2473 PF04324 BFD-like [2Fe-2S] binding domain M3Q_2473 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M3Q_2474 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2474 PF13806 Rieske-like [2Fe-2S] domain M3Q_2475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M3Q_2475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M3Q_2476 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2478 PF00072 Response regulator receiver domain M3Q_2478 PF03861 ANTAR domain M3Q_2479 PF13379 NMT1-like family M3Q_248 PF12796 Ankyrin repeats (3 copies) M3Q_2480 PF00817 impB/mucB/samB family M3Q_2480 PF11799 impB/mucB/samB family C-terminal domain M3Q_2480 PF13438 M3Q_2480 M3Q_2481 PF01220 Dehydroquinase class II M3Q_2482 PF00364 Biotin-requiring enzyme M3Q_2483 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M3Q_2483 PF02785 Biotin carboxylase C-terminal domain M3Q_2483 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_2485 PF12832 MFS_1 like family M3Q_2486 PF14518 Iron-containing redox enzyme M3Q_2487 PF00440 Bacterial regulatory proteins, tetR family M3Q_2488 PF03929 M3Q_2488 M3Q_2489 PF01645 Conserved region in glutamate synthase M3Q_249 PF03358 NADPH-dependent FMN reductase M3Q_2490 PF12146 Putative lysophospholipase M3Q_2491 PF02698 DUF218 domain M3Q_2492 PF01565 FAD binding domain M3Q_2492 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M3Q_2493 PF01451 Low molecular weight phosphotyrosine protein phosphatase M3Q_2494 PF10282 Lactonase, 7-bladed beta-propeller M3Q_2495 PF00465 Iron-containing alcohol dehydrogenase M3Q_2496 PF13279 Thioesterase-like superfamily M3Q_2497 PF04185 Phosphoesterase family M3Q_2497 PF05506 M3Q_2497 M3Q_2499 PF12169 DNA polymerase III subunits gamma and tau domain III M3Q_2499 PF13177 DNA polymerase III, delta subunit M3Q_25 PF06993 M3Q_25 M3Q_250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_2500 PF07690 Major Facilitator Superfamily M3Q_2501 PF00440 Bacterial regulatory proteins, tetR family M3Q_2502 PF00144 Beta-lactamase M3Q_2503 PF01575 MaoC like domain M3Q_2504 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_2505 PF00108 Thiolase, N-terminal domain M3Q_2505 PF02803 Thiolase, C-terminal domain M3Q_2506 PF05232 M3Q_2506 M3Q_2507 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2507 PF03466 LysR substrate binding domain M3Q_2508 PF00923 Transaldolase M3Q_2509 PF01810 M3Q_2509 M3Q_251 PF01252 M3Q_251 M3Q_2510 PF01037 AsnC family M3Q_2510 PF13412 Winged helix-turn-helix DNA-binding M3Q_2511 PF03594 M3Q_2511 M3Q_2512 PF02308 M3Q_2512 M3Q_2513 PF00122 E1-E2 ATPase M3Q_2513 PF00690 Cation transporter/ATPase, N-terminus M3Q_2513 PF00702 haloacid dehalogenase-like hydrolase M3Q_2515 PF06271 M3Q_2515 M3Q_2518 PF00582 Universal stress protein family M3Q_2519 PF00005 ABC transporter M3Q_252 PF00133 tRNA synthetases class I (I, L, M and V) M3Q_252 PF06827 Zinc finger found in FPG and IleRS M3Q_252 PF08264 Anticodon-binding domain of tRNA M3Q_2522 PF03922 OmpW family M3Q_2523 PF00593 TonB dependent receptor M3Q_2523 PF07715 TonB-dependent Receptor Plug Domain M3Q_2525 PF01609 Transposase DDE domain M3Q_2526 PF13527 Acetyltransferase (GNAT) domain M3Q_253 PF01687 Riboflavin kinase M3Q_253 PF06574 FAD synthetase M3Q_2531 PF00924 Mechanosensitive ion channel M3Q_2532 PF00593 TonB dependent receptor M3Q_2532 PF07715 TonB-dependent Receptor Plug Domain M3Q_2533 PF00440 Bacterial regulatory proteins, tetR family M3Q_2535 PF01037 AsnC family M3Q_2535 PF13412 Winged helix-turn-helix DNA-binding M3Q_2536 PF01817 Chorismate mutase type II M3Q_2537 PF00106 short chain dehydrogenase M3Q_2538 PF00106 short chain dehydrogenase M3Q_2539 PF13417 Glutathione S-transferase, N-terminal domain M3Q_2539 PF14497 Glutathione S-transferase, C-terminal domain M3Q_254 PF03595 Voltage-dependent anion channel M3Q_2540 PF01433 Peptidase family M1 M3Q_2540 PF11940 Domain of unknown function (DUF3458) M3Q_2540 PF17432 M3Q_2540 M3Q_2543 PF02110 Hydroxyethylthiazole kinase family M3Q_2544 PF06445 GyrI-like small molecule binding domain M3Q_2544 PF12833 Helix-turn-helix domain M3Q_2545 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase M3Q_2546 PF05970 M3Q_2546 M3Q_2546 PF14493 M3Q_2546 M3Q_2547 PF00465 Iron-containing alcohol dehydrogenase M3Q_2548 PF12146 Putative lysophospholipase M3Q_255 PF01048 Phosphorylase superfamily M3Q_2550 PF00171 Aldehyde dehydrogenase family M3Q_2551 PF13520 Amino acid permease M3Q_2552 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M3Q_2553 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M3Q_2554 PF00117 Glutamine amidotransferase class-I M3Q_2555 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3Q_2555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M3Q_2556 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M3Q_2559 PF00881 Nitroreductase family M3Q_256 PF00440 Bacterial regulatory proteins, tetR family M3Q_256 PF08362 YcdC-like protein, C-terminal region M3Q_2560 PF00892 EamA-like transporter family M3Q_2561 PF17209 M3Q_2561 M3Q_2562 PF01715 IPP transferase M3Q_2563 PF01119 DNA mismatch repair protein, C-terminal domain M3Q_2563 PF08676 MutL C terminal dimerisation domain M3Q_2563 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2564 PF02367 Uncharacterised P-loop hydrolase UPF0079 M3Q_2565 PF00849 RNA pseudouridylate synthase M3Q_2566 PF04221 RelB antitoxin M3Q_2567 PF00583 Acetyltransferase (GNAT) family M3Q_2568 PF00849 RNA pseudouridylate synthase M3Q_2568 PF01479 S4 domain M3Q_257 PF00005 ABC transporter M3Q_2570 PF04284 M3Q_2570 M3Q_2571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2571 PF03466 LysR substrate binding domain M3Q_2572 PF10670 M3Q_2572 M3Q_2574 PF07690 Major Facilitator Superfamily M3Q_2575 PF00520 Ion transport protein M3Q_2577 PF00330 Aconitase family (aconitate hydratase) M3Q_2577 PF06434 Aconitate hydratase 2 N-terminus M3Q_2577 PF11791 Aconitate B N-terminal domain M3Q_2579 PF04357 M3Q_2579 M3Q_258 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2580 PF01103 Surface antigen M3Q_2580 PF07244 Surface antigen variable number repeat M3Q_2580 PF17243 M3Q_2580 M3Q_2581 PF07690 Major Facilitator Superfamily M3Q_2582 PF03232 M3Q_2582 M3Q_2583 PF10973 M3Q_2583 M3Q_2584 PF00120 Glutamine synthetase, catalytic domain M3Q_2585 PF00072 Response regulator receiver domain M3Q_2585 PF00486 Transcriptional regulatory protein, C terminal M3Q_2586 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2586 PF00582 Universal stress protein family M3Q_2586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2586 PF02702 Osmosensitive K+ channel His kinase sensor domain M3Q_2586 PF13493 Domain of unknown function (DUF4118) M3Q_2587 PF02669 M3Q_2587 M3Q_2588 PF00122 E1-E2 ATPase M3Q_2588 PF00702 haloacid dehalogenase-like hydrolase M3Q_2589 PF03814 M3Q_2589 M3Q_259 PF00296 Luciferase-like monooxygenase M3Q_2590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M3Q_2591 PF02152 Dihydroneopterin aldolase M3Q_2592 PF03109 M3Q_2592 M3Q_2593 PF00899 ThiF family M3Q_2594 PF01613 Flavin reductase like domain M3Q_2595 PF00501 AMP-binding enzyme M3Q_2595 PF13193 AMP-binding enzyme C-terminal domain M3Q_2596 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2596 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2596 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2597 PF00106 short chain dehydrogenase M3Q_2598 PF12625 M3Q_2598 M3Q_2598 PF12833 Helix-turn-helix domain M3Q_2599 PF09084 NMT1/THI5 like M3Q_26 PF00107 Zinc-binding dehydrogenase M3Q_26 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_260 PF13379 NMT1-like family M3Q_2600 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2601 PF05175 Methyltransferase small domain M3Q_2602 PF00472 RF-1 domain M3Q_2602 PF03462 PCRF domain M3Q_2603 PF17124 M3Q_2603 M3Q_2604 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2604 PF03466 LysR substrate binding domain M3Q_2607 PF00296 Luciferase-like monooxygenase M3Q_2609 PF13994 M3Q_2609 M3Q_261 PF09084 NMT1/THI5 like M3Q_2610 PF13641 Glycosyltransferase like family 2 M3Q_2611 PF01522 Polysaccharide deacetylase M3Q_2611 PF14883 Hypothetical glycosyl hydrolase family 13 M3Q_2613 PF03618 M3Q_2613 M3Q_2614 PF00391 PEP-utilising enzyme, mobile domain M3Q_2614 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M3Q_2614 PF02896 PEP-utilising enzyme, TIM barrel domain M3Q_2615 PF06271 M3Q_2615 M3Q_2615 PF14237 M3Q_2615 M3Q_2616 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M3Q_2616 PF06481 COX Aromatic Rich Motif M3Q_2617 PF00115 Cytochrome C and Quinol oxidase polypeptide I M3Q_2618 PF00510 Cytochrome c oxidase subunit III M3Q_2619 PF03626 M3Q_2619 M3Q_262 PF00583 Acetyltransferase (GNAT) family M3Q_262 PF00696 Amino acid kinase family M3Q_2620 PF01040 UbiA prenyltransferase family M3Q_2621 PF01250 Ribosomal protein S6 M3Q_2622 PF01084 Ribosomal protein S18 M3Q_2624 PF00772 DnaB-like helicase N terminal domain M3Q_2624 PF03796 DnaB-like helicase C terminal domain M3Q_2625 PF00842 Alanine racemase, C-terminal domain M3Q_2625 PF01168 Alanine racemase, N-terminal domain M3Q_2626 PF00227 Proteasome subunit M3Q_2627 PF01841 Transglutaminase-like superfamily M3Q_2627 PF08379 M3Q_2627 M3Q_2628 PF04168 M3Q_2628 M3Q_2629 PF14403 M3Q_2629 M3Q_263 PF11776 Domain of unknown function (DUF3315) M3Q_2630 PF13280 M3Q_2630 M3Q_2631 PF01134 Glucose inhibited division protein A M3Q_2631 PF13932 GidA associated domain 3 M3Q_2633 PF06325 Ribosomal protein L11 methyltransferase (PrmA) M3Q_2634 PF11906 M3Q_2634 M3Q_2635 PF02954 Bacterial regulatory protein, Fis family M3Q_2636 PF01808 AICARFT/IMPCHase bienzyme M3Q_2636 PF02142 MGS-like domain M3Q_2637 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M3Q_2637 PF02843 Phosphoribosylglycinamide synthetase, C domain M3Q_2637 PF02844 Phosphoribosylglycinamide synthetase, N domain M3Q_2638 PF03180 NLPA lipoprotein M3Q_2639 PF00005 ABC transporter M3Q_2639 PF09383 NIL domain M3Q_264 PF11776 Domain of unknown function (DUF3315) M3Q_2640 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2641 PF00753 Metallo-beta-lactamase superfamily M3Q_2641 PF16123 M3Q_2641 M3Q_2643 PF00375 Sodium:dicarboxylate symporter family M3Q_2644 PF00440 Bacterial regulatory proteins, tetR family M3Q_2644 PF16859 M3Q_2644 M3Q_2645 PF07690 Major Facilitator Superfamily M3Q_2646 PF13610 M3Q_2646 M3Q_2647 PF01051 Initiator Replication protein M3Q_265 PF00106 short chain dehydrogenase M3Q_2650 PF05717 M3Q_2650 M3Q_2651 PF03050 M3Q_2651 M3Q_2651 PF13005 M3Q_2651 M3Q_2651 PF13007 M3Q_2651 M3Q_2651 PF13817 M3Q_2651 M3Q_2653 PF01636 Phosphotransferase enzyme family M3Q_2654 PF00005 ABC transporter M3Q_2654 PF12848 ABC transporter M3Q_2655 PF01609 Transposase DDE domain M3Q_2657 PF07091 Ribosomal RNA methyltransferase (FmrO) M3Q_2658 PF01609 Transposase DDE domain M3Q_2659 PF04986 M3Q_2659 M3Q_2659 PF14319 M3Q_2659 M3Q_266 PF13419 Haloacid dehalogenase-like hydrolase M3Q_2660 PF00809 Pterin binding enzyme M3Q_2661 PF00893 Small Multidrug Resistance protein M3Q_2662 PF13427 M3Q_2662 M3Q_2663 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2664 PF13523 Acetyltransferase (GNAT) domain M3Q_2665 PF00589 Phage integrase family M3Q_2665 PF13495 Phage integrase, N-terminal SAM-like domain M3Q_2666 PF13610 M3Q_2666 M3Q_2667 PF13673 Acetyltransferase (GNAT) domain M3Q_2669 PF07995 Glucose / Sorbosone dehydrogenase M3Q_267 PF13489 Methyltransferase domain M3Q_2670 PF00892 EamA-like transporter family M3Q_2671 PF01177 Asp/Glu/Hydantoin racemase M3Q_2672 PF03886 Protein of unknown function (DUF330) M3Q_2673 PF02470 M3Q_2673 M3Q_2674 PF04403 M3Q_2674 M3Q_2675 PF04403 M3Q_2675 M3Q_2676 PF02080 TrkA-C domain M3Q_2676 PF06826 M3Q_2676 M3Q_2677 PF00155 Aminotransferase class I and II M3Q_2678 PF00892 EamA-like transporter family M3Q_2679 PF00440 Bacterial regulatory proteins, tetR family M3Q_268 PF01323 DSBA-like thioredoxin domain M3Q_2680 PF00083 Sugar (and other) transporter M3Q_2680 PF08946 Osmosensory transporter coiled coil M3Q_2682 PF05229 M3Q_2682 M3Q_2683 PF00577 Outer membrane usher protein M3Q_2683 PF13953 PapC C-terminal domain M3Q_2684 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M3Q_2685 PF05229 M3Q_2685 M3Q_2686 PF05229 M3Q_2686 M3Q_2687 PF05229 M3Q_2687 M3Q_2688 PF00440 Bacterial regulatory proteins, tetR family M3Q_269 PF00440 Bacterial regulatory proteins, tetR family M3Q_2690 PF00392 Bacterial regulatory proteins, gntR family M3Q_2690 PF07729 FCD domain M3Q_2691 PF05673 Protein of unknown function (DUF815) M3Q_2692 PF03616 M3Q_2692 M3Q_2693 PF00561 alpha/beta hydrolase fold M3Q_2694 PF02311 AraC-like ligand binding domain M3Q_2694 PF12833 Helix-turn-helix domain M3Q_2695 PF01810 M3Q_2695 M3Q_2697 PF04940 Sensors of blue-light using FAD M3Q_2698 PF04076 Bacterial OB fold (BOF) protein M3Q_2699 PF00535 Glycosyl transferase family 2 M3Q_27 PF00440 Bacterial regulatory proteins, tetR family M3Q_27 PF16925 M3Q_27 M3Q_270 PF00440 Bacterial regulatory proteins, tetR family M3Q_2701 PF02585 GlcNAc-PI de-N-acetylase M3Q_2703 PF09939 M3Q_2703 M3Q_2704 PF00324 Amino acid permease M3Q_2705 PF00171 Aldehyde dehydrogenase family M3Q_2706 PF00202 Aminotransferase class-III M3Q_2707 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2707 PF03466 LysR substrate binding domain M3Q_2708 PF00069 Protein kinase domain M3Q_2709 PF01734 Patatin-like phospholipase M3Q_2709 PF11815 M3Q_2709 M3Q_271 PF00175 Oxidoreductase NAD-binding domain M3Q_271 PF00970 Oxidoreductase FAD-binding domain M3Q_2710 PF05673 Protein of unknown function (DUF815) M3Q_2712 PF00814 Glycoprotease family M3Q_2713 PF01165 Ribosomal protein S21 M3Q_2714 PF09424 Yqey-like protein M3Q_2715 PF01435 Peptidase family M48 M3Q_2716 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_2716 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_2718 PF01435 Peptidase family M48 M3Q_2719 PF00156 Phosphoribosyl transferase domain M3Q_2719 PF13522 Glutamine amidotransferase domain M3Q_272 PF00487 M3Q_272 M3Q_2720 PF02674 M3Q_2720 M3Q_2721 PF01180 Dihydroorotate dehydrogenase M3Q_2722 PF04612 Type II secretion system (T2SS), protein M M3Q_2723 PF05134 Type II secretion system (T2SS), protein L M3Q_2723 PF12693 GspL periplasmic domain M3Q_2724 PF00300 Histidine phosphatase superfamily (branch 1) M3Q_2725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M3Q_2725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M3Q_2726 PF00881 Nitroreductase family M3Q_2728 PF00270 DEAD/DEAH box helicase M3Q_2728 PF00271 Helicase conserved C-terminal domain M3Q_2729 PF00313 'Cold-shock' DNA-binding domain M3Q_273 PF01138 3' exoribonuclease family, domain 1 M3Q_273 PF03725 3' exoribonuclease family, domain 2 M3Q_2730 PF01206 Sulfurtransferase TusA M3Q_2731 PF00140 Sigma-70 factor, region 1 M3Q_2731 PF04542 Sigma-70 region 2 M3Q_2731 PF04545 Sigma-70, region 4 M3Q_2732 PF04241 M3Q_2732 M3Q_2733 PF02597 ThiS family M3Q_2734 PF05690 Thiazole biosynthesis protein ThiG M3Q_2736 PF03883 M3Q_2736 M3Q_2738 PF00753 Metallo-beta-lactamase superfamily M3Q_2739 PF01546 Peptidase family M20/M25/M40 M3Q_2739 PF07687 Peptidase dimerisation domain M3Q_274 PF04185 Phosphoesterase family M3Q_274 PF05506 M3Q_274 M3Q_2741 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3Q_2741 PF02153 Prephenate dehydrogenase M3Q_2742 PF00800 Prephenate dehydratase M3Q_2742 PF01817 Chorismate mutase type II M3Q_2742 PF01842 ACT domain M3Q_2743 PF00756 Putative esterase M3Q_2744 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2744 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_2744 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2745 PF00375 Sodium:dicarboxylate symporter family M3Q_2746 PF00591 Glycosyl transferase family, a/b domain M3Q_2746 PF02885 Glycosyl transferase family, helical bundle domain M3Q_2747 PF07023 M3Q_2747 M3Q_2748 PF01513 ATP-NAD kinase M3Q_2749 PF00905 Penicillin binding protein transpeptidase domain M3Q_2749 PF00912 Transglycosylase M3Q_2749 PF14814 Bifunctional transglycosylase second domain M3Q_2751 PF00293 NUDIX domain M3Q_2751 PF02581 Thiamine monophosphate synthase/TENI M3Q_2752 PF10636 Hemin uptake protein hemP M3Q_2753 PF00512 His Kinase A (phospho-acceptor) domain M3Q_2753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_2754 PF00072 Response regulator receiver domain M3Q_2754 PF00486 Transcriptional regulatory protein, C terminal M3Q_2755 PF04076 Bacterial OB fold (BOF) protein M3Q_2756 PF00437 Type II/IV secretion system protein M3Q_2756 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M3Q_2757 PF02308 M3Q_2757 M3Q_2757 PF13194 M3Q_2757 M3Q_2758 PF01980 Uncharacterised protein family UPF0066 M3Q_2759 PF00175 Oxidoreductase NAD-binding domain M3Q_2759 PF00970 Oxidoreductase FAD-binding domain M3Q_276 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M3Q_276 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M3Q_2760 PF02567 Phenazine biosynthesis-like protein M3Q_2761 PF00155 Aminotransferase class I and II M3Q_2761 PF00392 Bacterial regulatory proteins, gntR family M3Q_2762 PF01136 M3Q_2762 M3Q_2762 PF16325 M3Q_2762 M3Q_2764 PF00893 Small Multidrug Resistance protein M3Q_2765 PF00005 ABC transporter M3Q_2766 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2767 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2768 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_2769 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2769 PF03466 LysR substrate binding domain M3Q_277 PF01510 N-acetylmuramoyl-L-alanine amidase M3Q_2770 PF16576 M3Q_2770 M3Q_2771 PF00873 AcrB/AcrD/AcrF family M3Q_2772 PF02321 Outer membrane efflux protein M3Q_2773 PF00464 Serine hydroxymethyltransferase M3Q_2774 PF05117 M3Q_2774 M3Q_2774 PF06877 Regulator of ribonuclease activity B M3Q_2775 PF03583 Secretory lipase M3Q_2776 PF12843 M3Q_2776 M3Q_2778 PF00005 ABC transporter M3Q_2779 PF01061 M3Q_2779 M3Q_278 PF03023 M3Q_278 M3Q_2780 PF14489 QueF-like protein M3Q_2780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M3Q_2782 PF01098 M3Q_2782 M3Q_2783 PF13406 Transglycosylase SLT domain M3Q_2784 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel M3Q_2785 PF06127 M3Q_2785 M3Q_2786 PF05437 M3Q_2786 M3Q_2787 PF03591 M3Q_2787 M3Q_2788 PF02311 AraC-like ligand binding domain M3Q_2788 PF12833 Helix-turn-helix domain M3Q_2789 PF11948 M3Q_2789 M3Q_279 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_279 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M3Q_2790 PF00889 Elongation factor TS M3Q_2791 PF00318 Ribosomal protein S2 M3Q_2792 PF00557 Metallopeptidase family M24 M3Q_2793 PF03922 OmpW family M3Q_2794 PF07690 Major Facilitator Superfamily M3Q_2795 PF07690 Major Facilitator Superfamily M3Q_2797 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_2797 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2798 PF04055 Radical SAM superfamily M3Q_2798 PF16881 M3Q_2798 M3Q_2799 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_2799 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_2799 PF09317 M3Q_2799 M3Q_28 PF00005 ABC transporter M3Q_280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M3Q_2800 PF02627 Carboxymuconolactone decarboxylase family M3Q_2801 PF03412 Peptidase C39 family M3Q_2802 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M3Q_2802 PF05221 S-adenosyl-L-homocysteine hydrolase M3Q_2803 PF02219 Methylenetetrahydrofolate reductase M3Q_2804 PF04452 RNA methyltransferase M3Q_2805 PF00563 EAL domain M3Q_2805 PF00989 PAS fold M3Q_2805 PF00990 GGDEF domain M3Q_2805 PF08447 PAS fold M3Q_2806 PF00390 Malic enzyme, N-terminal domain M3Q_2806 PF01515 Phosphate acetyl/butaryl transferase M3Q_2806 PF03949 Malic enzyme, NAD binding domain M3Q_2807 PF01743 Poly A polymerase head domain M3Q_2807 PF12627 Probable RNA and SrmB- binding site of polymerase A M3Q_2808 PF13180 PDZ domain M3Q_2808 PF13365 Trypsin-like peptidase domain M3Q_2809 PF01784 NIF3 (NGG1p interacting factor 3) M3Q_281 PF02706 Chain length determinant protein M3Q_281 PF13614 AAA domain M3Q_281 PF13807 M3Q_281 M3Q_2810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M3Q_2810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M3Q_2811 PF10881 M3Q_2811 M3Q_2813 PF03583 Secretory lipase M3Q_2814 PF01040 UbiA prenyltransferase family M3Q_2815 PF04345 Chorismate lyase M3Q_2816 PF00120 Glutamine synthetase, catalytic domain M3Q_2816 PF03951 Glutamine synthetase, beta-Grasp domain M3Q_2817 PF00854 POT family M3Q_2818 PF00557 Metallopeptidase family M24 M3Q_2818 PF01321 Creatinase/Prolidase N-terminal domain M3Q_2818 PF16188 M3Q_2818 M3Q_2818 PF16189 M3Q_2818 M3Q_2819 PF00117 Glutamine amidotransferase class-I M3Q_282 PF01451 Low molecular weight phosphotyrosine protein phosphatase M3Q_2820 PF01433 Peptidase family M1 M3Q_2820 PF11838 ERAP1-like C-terminal domain M3Q_2821 PF00593 TonB dependent receptor M3Q_2821 PF07715 TonB-dependent Receptor Plug Domain M3Q_2822 PF00591 Glycosyl transferase family, a/b domain M3Q_2822 PF02885 Glycosyl transferase family, helical bundle domain M3Q_2823 PF00218 Indole-3-glycerol phosphate synthase M3Q_2824 PF01713 Smr domain M3Q_2825 PF02625 XdhC and CoxI family M3Q_2825 PF13478 XdhC Rossmann domain M3Q_2826 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M3Q_2826 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M3Q_2827 PF00941 FAD binding domain in molybdopterin dehydrogenase M3Q_2827 PF01799 [2Fe-2S] binding domain M3Q_2827 PF03450 CO dehydrogenase flavoprotein C-terminal domain M3Q_2828 PF01227 GTP cyclohydrolase I M3Q_283 PF02563 Polysaccharide biosynthesis/export protein M3Q_2830 PF01609 Transposase DDE domain M3Q_2831 PF00144 Beta-lactamase M3Q_2832 PF13387 M3Q_2832 M3Q_2833 PF11220 M3Q_2833 M3Q_2834 PF05675 M3Q_2834 M3Q_2835 PF01208 Uroporphyrinogen decarboxylase (URO-D) M3Q_2836 PF01471 Putative peptidoglycan binding domain M3Q_2836 PF03734 L,D-transpeptidase catalytic domain M3Q_2837 PF00425 chorismate binding enzyme M3Q_2838 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_2839 PF00975 Thioesterase domain M3Q_284 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3Q_284 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3Q_284 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M3Q_2840 PF00005 ABC transporter M3Q_2840 PF00664 ABC transporter transmembrane region M3Q_2841 PF00005 ABC transporter M3Q_2841 PF00664 ABC transporter transmembrane region M3Q_2843 PF00282 Pyridoxal-dependent decarboxylase conserved domain M3Q_2844 PF00550 Phosphopantetheine attachment site M3Q_2844 PF00857 Isochorismatase family M3Q_2845 PF00501 AMP-binding enzyme M3Q_2845 PF13193 AMP-binding enzyme C-terminal domain M3Q_2846 PF00668 Condensation domain M3Q_2847 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M3Q_2848 PF00593 TonB dependent receptor M3Q_2848 PF07715 TonB-dependent Receptor Plug Domain M3Q_2849 PF01497 Periplasmic binding protein M3Q_285 PF16363 M3Q_285 M3Q_2850 PF00005 ABC transporter M3Q_2851 PF01032 FecCD transport family M3Q_2852 PF01032 FecCD transport family M3Q_2855 PF00550 Phosphopantetheine attachment site M3Q_2855 PF00668 Condensation domain M3Q_2856 PF00501 AMP-binding enzyme M3Q_2856 PF13193 AMP-binding enzyme C-terminal domain M3Q_2857 PF04954 Siderophore-interacting protein M3Q_2857 PF08021 Siderophore-interacting FAD-binding domain M3Q_2858 PF08348 M3Q_2858 M3Q_2858 PF13309 M3Q_2858 M3Q_2859 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_286 PF00483 Nucleotidyl transferase M3Q_2860 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_2861 PF02678 Pirin M3Q_2862 PF00440 Bacterial regulatory proteins, tetR family M3Q_2863 PF00440 Bacterial regulatory proteins, tetR family M3Q_2864 PF00440 Bacterial regulatory proteins, tetR family M3Q_2865 PF00107 Zinc-binding dehydrogenase M3Q_2865 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_2866 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M3Q_2866 PF13378 Enolase C-terminal domain-like M3Q_2867 PF00083 Sugar (and other) transporter M3Q_2868 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M3Q_2869 PF00892 EamA-like transporter family M3Q_287 PF05523 WxcM-like, C-terminal M3Q_2870 PF00892 EamA-like transporter family M3Q_2871 PF01914 M3Q_2871 M3Q_2873 PF06249 Ethanolamine utilisation protein EutQ M3Q_2874 PF01266 FAD dependent oxidoreductase M3Q_2875 PF00301 Rubredoxin M3Q_2875 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2876 PF00171 Aldehyde dehydrogenase family M3Q_2877 PF00355 Rieske [2Fe-2S] domain M3Q_2877 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M3Q_2878 PF02028 BCCT family transporter M3Q_2879 PF02028 BCCT family transporter M3Q_288 PF13302 Acetyltransferase (GNAT) domain M3Q_2880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2880 PF03466 LysR substrate binding domain M3Q_2881 PF00324 Amino acid permease M3Q_2882 PF00171 Aldehyde dehydrogenase family M3Q_2883 PF05899 Protein of unknown function (DUF861) M3Q_2884 PF01266 FAD dependent oxidoreductase M3Q_2885 PF07905 M3Q_2885 M3Q_2885 PF13556 PucR C-terminal helix-turn-helix domain M3Q_2886 PF00440 Bacterial regulatory proteins, tetR family M3Q_2887 PF03374 M3Q_2887 M3Q_289 PF01575 MaoC like domain M3Q_2891 PF04328 M3Q_2891 M3Q_2892 PF02554 M3Q_2892 M3Q_2892 PF13722 M3Q_2892 M3Q_2893 PF01132 Elongation factor P (EF-P) OB domain M3Q_2893 PF08207 Elongation factor P (EF-P) KOW-like domain M3Q_2893 PF09285 Elongation factor P, C-terminal M3Q_2894 PF04055 Radical SAM superfamily M3Q_2894 PF13394 4Fe-4S single cluster domain M3Q_29 PF13401 AAA domain M3Q_290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M3Q_2901 PF06199 M3Q_2901 M3Q_2903 PF04883 M3Q_2903 M3Q_2904 PF05521 Phage head-tail joining protein M3Q_2907 PF05135 Phage gp6-like head-tail connector protein M3Q_2908 PF05065 Phage capsid family M3Q_2909 PF04586 M3Q_2909 M3Q_291 PF01943 M3Q_291 M3Q_2910 PF04860 Phage portal protein M3Q_2911 PF03354 M3Q_2911 M3Q_2912 PF05119 M3Q_2912 M3Q_2919 PF08273 Zinc-binding domain of primase-helicase M3Q_2919 PF13662 Toprim domain M3Q_292 PF00535 Glycosyl transferase family 2 M3Q_2922 PF00717 Peptidase S24-like M3Q_2922 PF01381 Helix-turn-helix M3Q_293 PF00534 Glycosyl transferases group 1 M3Q_293 PF13439 Glycosyltransferase Family 4 M3Q_2930 PF00589 Phage integrase family M3Q_2931 PF04328 M3Q_2931 M3Q_2932 PF02554 M3Q_2932 M3Q_2932 PF13722 M3Q_2932 M3Q_2933 PF01132 Elongation factor P (EF-P) OB domain M3Q_2933 PF08207 Elongation factor P (EF-P) KOW-like domain M3Q_2933 PF09285 Elongation factor P, C-terminal M3Q_2934 PF04055 Radical SAM superfamily M3Q_2934 PF13394 4Fe-4S single cluster domain M3Q_2936 PF00563 EAL domain M3Q_2937 PF01197 Ribosomal protein L31 M3Q_2938 PF13593 SBF-like CPA transporter family (DUF4137) M3Q_2939 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_2940 PF07690 Major Facilitator Superfamily M3Q_2941 PF05362 Lon protease (S16) C-terminal proteolytic domain M3Q_2941 PF13654 AAA domain M3Q_2942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2942 PF03466 LysR substrate binding domain M3Q_2943 PF01476 LysM domain M3Q_2943 PF01551 Peptidase family M23 M3Q_2944 PF01975 Survival protein SurE M3Q_2947 PF00768 D-alanyl-D-alanine carboxypeptidase M3Q_2947 PF07943 Penicillin-binding protein 5, C-terminal domain M3Q_2948 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_2949 PF00293 NUDIX domain M3Q_295 PF00534 Glycosyl transferases group 1 M3Q_2950 PF03054 tRNA methyl transferase M3Q_2951 PF04356 Protein of unknown function (DUF489) M3Q_2952 PF00206 Lyase M3Q_2952 PF08328 Adenylosuccinate lyase C-terminal M3Q_2953 PF09997 M3Q_2953 M3Q_2955 PF01343 Peptidase family S49 M3Q_2955 PF08496 M3Q_2955 M3Q_2956 PF00005 ABC transporter M3Q_2957 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2957 PF11812 M3Q_2957 M3Q_2958 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_2958 PF12501 M3Q_2958 M3Q_2959 PF12849 PBP superfamily domain M3Q_296 PF00535 Glycosyl transferase family 2 M3Q_2960 PF00324 Amino acid permease M3Q_2961 PF00205 Thiamine pyrophosphate enzyme, central domain M3Q_2961 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3Q_2961 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3Q_2962 PF01037 AsnC family M3Q_2962 PF13404 AsnC-type helix-turn-helix domain M3Q_2963 PF00171 Aldehyde dehydrogenase family M3Q_2964 PF00282 Pyridoxal-dependent decarboxylase conserved domain M3Q_2965 PF00202 Aminotransferase class-III M3Q_2966 PF04402 Protein of unknown function (DUF541) M3Q_2967 PF00440 Bacterial regulatory proteins, tetR family M3Q_2968 PF14539 Domain of unknown function (DUF4442) M3Q_2969 PF00487 M3Q_2969 M3Q_297 PF02397 M3Q_297 M3Q_2970 PF00175 Oxidoreductase NAD-binding domain M3Q_2970 PF00970 Oxidoreductase FAD-binding domain M3Q_2971 PF00440 Bacterial regulatory proteins, tetR family M3Q_2972 PF01594 M3Q_2972 M3Q_2973 PF00176 SNF2 family N-terminal domain M3Q_2973 PF00271 Helicase conserved C-terminal domain M3Q_2973 PF12137 RNA polymerase recycling family C-terminal M3Q_2974 PF00849 RNA pseudouridylate synthase M3Q_2976 PF00202 Aminotransferase class-III M3Q_2977 PF02581 Thiamine monophosphate synthase/TENI M3Q_2978 PF06127 M3Q_2978 M3Q_2979 PF01928 CYTH domain M3Q_2979 PF05235 CHAD domain M3Q_298 PF00483 Nucleotidyl transferase M3Q_2981 PF11342 Protein of unknown function (DUF3144) M3Q_2982 PF00675 Insulinase (Peptidase family M16) M3Q_2982 PF05193 Peptidase M16 inactive domain M3Q_2983 PF02567 Phenazine biosynthesis-like protein M3Q_2984 PF00375 Sodium:dicarboxylate symporter family M3Q_2985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_2985 PF03466 LysR substrate binding domain M3Q_2986 PF06779 M3Q_2986 M3Q_2989 PF00180 Isocitrate/isopropylmalate dehydrogenase M3Q_299 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M3Q_299 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M3Q_2990 PF00849 RNA pseudouridylate synthase M3Q_2991 PF03971 Monomeric isocitrate dehydrogenase M3Q_2992 PF05299 M61 glycyl aminopeptidase M3Q_2993 PF00768 D-alanyl-D-alanine carboxypeptidase M3Q_2994 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_2995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_2996 PF00875 DNA photolyase M3Q_2996 PF03441 FAD binding domain of DNA photolyase M3Q_2999 PF13641 Glycosyltransferase like family 2 M3Q_3 PF00892 EamA-like transporter family M3Q_30 PF00990 GGDEF domain M3Q_300 PF00342 Phosphoglucose isomerase M3Q_3002 PF02350 UDP-N-acetylglucosamine 2-epimerase M3Q_3004 PF01988 M3Q_3004 M3Q_3005 PF03060 Nitronate monooxygenase M3Q_3006 PF01207 Dihydrouridine synthase (Dus) M3Q_3007 PF07759 M3Q_3007 M3Q_3008 PF12710 haloacid dehalogenase-like hydrolase M3Q_3009 PF00696 Amino acid kinase family M3Q_3009 PF01472 PUA domain M3Q_301 PF16363 M3Q_301 M3Q_3010 PF01018 GTP1/OBG M3Q_3010 PF01926 50S ribosome-binding GTPase M3Q_3013 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3Q_3013 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M3Q_3014 PF00892 EamA-like transporter family M3Q_3015 PF08212 Lipocalin-like domain M3Q_3016 PF00271 Helicase conserved C-terminal domain M3Q_3016 PF02151 UvrB/uvrC motif M3Q_3016 PF12344 Ultra-violet resistance protein B M3Q_3018 PF00990 GGDEF domain M3Q_3018 PF13188 PAS domain M3Q_302 PF00884 Sulfatase M3Q_3020 PF00155 Aminotransferase class I and II M3Q_3021 PF04828 Glutathione-dependent formaldehyde-activating enzyme M3Q_3022 PF03061 Thioesterase superfamily M3Q_3024 PF00106 short chain dehydrogenase M3Q_3025 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M3Q_3026 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M3Q_3027 PF02565 Recombination protein O C terminal M3Q_3027 PF11967 Recombination protein O N terminal M3Q_3029 PF01926 50S ribosome-binding GTPase M3Q_3029 PF07650 KH domain M3Q_303 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3Q_303 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_303 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_303 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_3030 PF00035 Double-stranded RNA binding motif M3Q_3030 PF14622 Ribonuclease-III-like M3Q_3031 PF16137 M3Q_3031 M3Q_3032 PF00717 Peptidase S24-like M3Q_3032 PF10502 Signal peptidase, peptidase S26 M3Q_3033 PF00009 Elongation factor Tu GTP binding domain M3Q_3033 PF00679 Elongation factor G C-terminus M3Q_3033 PF03144 Elongation factor Tu domain 2 M3Q_3033 PF06421 GTP-binding protein LepA C-terminus M3Q_3034 PF01643 Acyl-ACP thioesterase M3Q_3035 PF13180 PDZ domain M3Q_3035 PF13365 Trypsin-like peptidase domain M3Q_3036 PF00890 FAD binding domain M3Q_3036 PF02910 Fumarate reductase flavoprotein C-term M3Q_3037 PF03061 Thioesterase superfamily M3Q_3038 PF02223 Thymidylate kinase M3Q_3039 PF02618 YceG-like family M3Q_304 PF02652 M3Q_304 M3Q_3040 PF01063 Aminotransferase class IV M3Q_3041 PF13531 Bacterial extracellular solute-binding protein M3Q_3042 PF06821 Serine hydrolase M3Q_3043 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_3044 PF00528 Binding-protein-dependent transport system inner membrane component M3Q_3045 PF00005 ABC transporter M3Q_3045 PF12857 M3Q_3045 M3Q_3046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3046 PF03466 LysR substrate binding domain M3Q_3048 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_3048 PF14602 Hexapeptide repeat of succinyl-transferase M3Q_3048 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M3Q_3049 PF04055 Radical SAM superfamily M3Q_3049 PF13394 4Fe-4S single cluster domain M3Q_305 PF00392 Bacterial regulatory proteins, gntR family M3Q_305 PF07729 FCD domain M3Q_3050 PF06508 Queuosine biosynthesis protein QueC M3Q_3052 PF01902 ATP-binding region M3Q_3053 PF00578 AhpC/TSA family M3Q_3054 PF00188 Cysteine-rich secretory protein family M3Q_3055 PF01467 Cytidylyltransferase M3Q_3056 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_3059 PF07690 Major Facilitator Superfamily M3Q_306 PF01070 FMN-dependent dehydrogenase M3Q_3060 PF02769 AIR synthase related protein, C-terminal domain M3Q_3060 PF13507 CobB/CobQ-like glutamine amidotransferase domain M3Q_3061 PF01966 HD domain M3Q_3062 PF01330 RuvA N terminal domain M3Q_3062 PF07499 RuvA, C-terminal domain M3Q_3062 PF14520 Helix-hairpin-helix domain M3Q_3063 PF05491 Holliday junction DNA helicase ruvB C-terminus M3Q_3063 PF05496 Holliday junction DNA helicase ruvB N-terminus M3Q_3064 PF01546 Peptidase family M20/M25/M40 M3Q_3064 PF07687 Peptidase dimerisation domain M3Q_3065 PF03061 Thioesterase superfamily M3Q_3066 PF01618 M3Q_3066 M3Q_3067 PF02472 Biopolymer transport protein ExbD/TolR M3Q_3068 PF13103 TonB C terminal M3Q_3069 PF04052 TolB amino-terminal domain M3Q_3069 PF07676 WD40-like Beta Propeller Repeat M3Q_307 PF01565 FAD binding domain M3Q_307 PF09330 D-lactate dehydrogenase, membrane binding M3Q_3070 PF00691 OmpA family M3Q_3072 PF00316 Fructose-1-6-bisphosphatase M3Q_3073 PF00588 SpoU rRNA Methylase family M3Q_3074 PF04542 Sigma-70 region 2 M3Q_3074 PF08281 Sigma-70, region 4 M3Q_3076 PF11304 M3Q_3076 M3Q_3079 PF00308 Bacterial dnaA protein M3Q_308 PF00155 Aminotransferase class I and II M3Q_3080 PF01594 M3Q_3080 M3Q_3081 PF00586 AIR synthase related protein, N-terminal domain M3Q_3081 PF02769 AIR synthase related protein, C-terminal domain M3Q_3082 PF00551 Formyl transferase M3Q_3083 PF12697 Alpha/beta hydrolase family M3Q_3084 PF01343 Peptidase family S49 M3Q_3085 PF03279 M3Q_3085 M3Q_3086 PF00753 Metallo-beta-lactamase superfamily M3Q_3086 PF03772 M3Q_3086 M3Q_3086 PF13567 M3Q_3086 M3Q_3087 PF00005 ABC transporter M3Q_3088 PF02687 M3Q_3088 M3Q_3088 PF12704 MacB-like periplasmic core domain M3Q_3089 PF00892 EamA-like transporter family M3Q_309 PF00392 Bacterial regulatory proteins, gntR family M3Q_309 PF07729 FCD domain M3Q_3090 PF02639 M3Q_3090 M3Q_3093 PF00266 Aminotransferase class-V M3Q_3094 PF02321 Outer membrane efflux protein M3Q_3095 PF16576 M3Q_3095 M3Q_3096 PF12698 ABC-2 family transporter protein M3Q_3097 PF12698 ABC-2 family transporter protein M3Q_3098 PF04794 YdjC-like protein M3Q_3099 PF00535 Glycosyl transferase family 2 M3Q_31 PF16956 M3Q_31 M3Q_310 PF13714 Phosphoenolpyruvate phosphomutase M3Q_3100 PF04138 M3Q_3100 M3Q_3101 PF13231 M3Q_3101 M3Q_3102 PF00521 DNA gyrase/topoisomerase IV, subunit A M3Q_3102 PF03989 DNA gyrase C-terminal domain, beta-propeller M3Q_3103 PF00766 Electron transfer flavoprotein FAD-binding domain M3Q_3103 PF01012 Electron transfer flavoprotein domain M3Q_3104 PF01012 Electron transfer flavoprotein domain M3Q_3105 PF00589 Phage integrase family M3Q_3105 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_3106 PF01810 M3Q_3106 M3Q_3107 PF01678 Diaminopimelate epimerase M3Q_3108 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M3Q_3108 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M3Q_311 PF00285 Citrate synthase M3Q_3110 PF00324 Amino acid permease M3Q_3111 PF06745 KaiC M3Q_3111 PF13541 Subunit ChlI of Mg-chelatase M3Q_3112 PF04280 Tim44-like domain M3Q_3113 PF00152 tRNA synthetases class II (D, K and N) M3Q_3114 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_3114 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_3114 PF11890 Domain of unknown function (DUF3410) M3Q_3115 PF06803 M3Q_3115 M3Q_3116 PF02634 FdhD/NarQ family M3Q_3117 PF00384 Molybdopterin oxidoreductase M3Q_3117 PF01568 Molydopterin dinucleotide binding domain M3Q_3118 PF02595 Glycerate kinase family M3Q_3119 PF00440 Bacterial regulatory proteins, tetR family M3Q_312 PF00330 Aconitase family (aconitate hydratase) M3Q_312 PF00694 Aconitase C-terminal domain M3Q_3120 PF00106 short chain dehydrogenase M3Q_3121 PF00881 Nitroreductase family M3Q_3122 PF00440 Bacterial regulatory proteins, tetR family M3Q_3123 PF10118 M3Q_3123 M3Q_3124 PF00440 Bacterial regulatory proteins, tetR family M3Q_3126 PF00501 AMP-binding enzyme M3Q_3126 PF00550 Phosphopantetheine attachment site M3Q_3126 PF13193 AMP-binding enzyme C-terminal domain M3Q_3127 PF14534 Domain of unknown function (DUF4440) M3Q_3128 PF01272 Transcription elongation factor, GreA/GreB, C-term M3Q_3128 PF03449 Transcription elongation factor, N-terminal M3Q_3129 PF00497 Bacterial extracellular solute-binding proteins, family 3 M3Q_3129 PF01464 Transglycosylase SLT domain M3Q_3130 PF02036 SCP-2 sterol transfer family M3Q_3131 PF01171 PP-loop family M3Q_3132 PF01464 Transglycosylase SLT domain M3Q_3133 PF01435 Peptidase family M48 M3Q_3134 PF13430 M3Q_3134 M3Q_3135 PF00873 AcrB/AcrD/AcrF family M3Q_3136 PF03009 Glycerophosphoryl diester phosphodiesterase family M3Q_3137 PF00753 Metallo-beta-lactamase superfamily M3Q_3138 PF01219 Prokaryotic diacylglycerol kinase M3Q_3139 PF00118 TCP-1/cpn60 chaperonin family M3Q_314 PF13548 M3Q_314 M3Q_3140 PF00166 Chaperonin 10 Kd subunit M3Q_3141 PF12245 Bacterial Ig-like domain (group 3) M3Q_3142 PF00149 Calcineurin-like phosphoesterase M3Q_3143 PF00781 Diacylglycerol kinase catalytic domain M3Q_3144 PF00821 Phosphoenolpyruvate carboxykinase M3Q_3144 PF17297 M3Q_3144 M3Q_3145 PF01266 FAD dependent oxidoreductase M3Q_3145 PF16901 M3Q_3145 M3Q_3146 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M3Q_3146 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M3Q_3147 PF00083 Sugar (and other) transporter M3Q_3149 PF06325 Ribosomal protein L11 methyltransferase (PrmA) M3Q_315 PF00583 Acetyltransferase (GNAT) family M3Q_3150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M3Q_3150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M3Q_3151 PF09423 PhoD-like phosphatase M3Q_3151 PF16655 M3Q_3151 M3Q_3154 PF00809 Pterin binding enzyme M3Q_3155 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_3155 PF01434 Peptidase family M41 M3Q_3155 PF06480 FtsH Extracellular M3Q_3156 PF01728 FtsJ-like methyltransferase M3Q_3157 PF01985 CRS1 / YhbY (CRM) domain M3Q_316 PF00293 NUDIX domain M3Q_3160 PF00117 Glutamine amidotransferase class-I M3Q_3160 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M3Q_3161 PF02142 MGS-like domain M3Q_3161 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_3161 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M3Q_3162 PF01272 Transcription elongation factor, GreA/GreB, C-term M3Q_3162 PF03449 Transcription elongation factor, N-terminal M3Q_3163 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_3164 PF00582 Universal stress protein family M3Q_3165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3Q_3167 PF09587 Bacterial capsule synthesis protein PGA_cap M3Q_3173 PF00589 Phage integrase family M3Q_3173 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_3175 PF06414 Zeta toxin M3Q_318 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_318 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_3180 PF00999 Sodium/hydrogen exchanger family M3Q_3181 PF04228 M3Q_3181 M3Q_3182 PF05661 M3Q_3182 M3Q_3183 PF00579 tRNA synthetases class I (W and Y) M3Q_3184 PF00549 CoA-ligase M3Q_3184 PF02629 CoA binding domain M3Q_3185 PF00549 CoA-ligase M3Q_3185 PF08442 ATP-grasp domain M3Q_3186 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_3186 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3187 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_3187 PF00364 Biotin-requiring enzyme M3Q_3187 PF02817 e3 binding domain M3Q_3188 PF00676 Dehydrogenase E1 component M3Q_3188 PF02779 Transketolase, pyrimidine binding domain M3Q_3188 PF16078 M3Q_3188 M3Q_3188 PF16870 M3Q_3188 M3Q_3189 PF13085 2Fe-2S iron-sulfur cluster binding domain M3Q_3189 PF13534 4Fe-4S dicluster domain M3Q_319 PF00106 short chain dehydrogenase M3Q_3190 PF00890 FAD binding domain M3Q_3190 PF02910 Fumarate reductase flavoprotein C-term M3Q_3191 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M3Q_3192 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M3Q_3193 PF00285 Citrate synthase M3Q_3194 PF06945 M3Q_3194 M3Q_3195 PF00581 Rhodanese-like domain M3Q_3197 PF03695 Uncharacterised protein family (UPF0149) M3Q_3199 PF00140 Sigma-70 factor, region 1 M3Q_3199 PF03979 Sigma-70 factor, region 1 M3Q_3199 PF04539 Sigma-70 region 3 M3Q_3199 PF04542 Sigma-70 region 2 M3Q_3199 PF04545 Sigma-70, region 4 M3Q_3199 PF04546 Sigma-70, non-essential region M3Q_32 PF02028 BCCT family transporter M3Q_320 PF00440 Bacterial regulatory proteins, tetR family M3Q_320 PF16925 M3Q_320 M3Q_3200 PF04359 Protein of unknown function (DUF493) M3Q_3201 PF03099 Biotin/lipoate A/B protein ligase family M3Q_3203 PF00465 Iron-containing alcohol dehydrogenase M3Q_3204 PF00324 Amino acid permease M3Q_3205 PF12724 Flavodoxin domain M3Q_3206 PF01638 HxlR-like helix-turn-helix M3Q_3207 PF00588 SpoU rRNA Methylase family M3Q_3208 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M3Q_3208 PF10414 Sirohaem synthase dimerisation region M3Q_3209 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3Q_3209 PF02403 Seryl-tRNA synthetase N-terminal domain M3Q_321 PF07690 Major Facilitator Superfamily M3Q_3210 PF11738 Protein of unknown function (DUF3298) M3Q_3211 PF03548 Outer membrane lipoprotein carrier protein LolA M3Q_3212 PF01016 Ribosomal L27 protein M3Q_3213 PF00829 Ribosomal prokaryotic L21 protein M3Q_3214 PF00348 Polyprenyl synthetase M3Q_3215 PF10136 M3Q_3215 M3Q_3216 PF01569 PAP2 superfamily M3Q_3217 PF00529 HlyD family secretion protein M3Q_3217 PF16576 M3Q_3217 M3Q_3218 PF00873 AcrB/AcrD/AcrF family M3Q_3219 PF02321 Outer membrane efflux protein M3Q_322 PF06210 M3Q_322 M3Q_3220 PF01906 Putative heavy-metal-binding M3Q_3221 PF01906 Putative heavy-metal-binding M3Q_3222 PF13577 SnoaL-like domain M3Q_3223 PF00106 short chain dehydrogenase M3Q_3225 PF00133 tRNA synthetases class I (I, L, M and V) M3Q_3225 PF08264 Anticodon-binding domain of tRNA M3Q_3225 PF10458 Valyl tRNA synthetase tRNA binding arm M3Q_3226 PF13649 Methyltransferase domain M3Q_3228 PF03547 M3Q_3228 M3Q_3229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3229 PF03466 LysR substrate binding domain M3Q_323 PF00849 RNA pseudouridylate synthase M3Q_3230 PF00909 Ammonium Transporter Family M3Q_3231 PF01569 PAP2 superfamily M3Q_3232 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3233 PF00072 Response regulator receiver domain M3Q_3233 PF00486 Transcriptional regulatory protein, C terminal M3Q_3234 PF00884 Sulfatase M3Q_3234 PF08019 M3Q_3234 M3Q_3235 PF02530 M3Q_3235 M3Q_3236 PF13000 M3Q_3236 M3Q_3237 PF01553 Acyltransferase M3Q_3238 PF01734 Patatin-like phospholipase M3Q_3239 PF01957 NfeD-like C-terminal, partner-binding M3Q_324 PF06877 Regulator of ribonuclease activity B M3Q_3240 PF01145 SPFH domain / Band 7 family M3Q_3241 PF04237 YjbR M3Q_3242 PF00348 Polyprenyl synthetase M3Q_3243 PF04303 PrpF protein M3Q_3244 PF00324 Amino acid permease M3Q_3245 PF01965 DJ-1/PfpI family M3Q_3246 PF00107 Zinc-binding dehydrogenase M3Q_3246 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_3247 PF06719 M3Q_3247 M3Q_3247 PF12833 Helix-turn-helix domain M3Q_3248 PF02673 M3Q_3248 M3Q_3249 PF08223 PaaX-like protein C-terminal domain M3Q_325 PF12680 SnoaL-like domain M3Q_3250 PF00487 M3Q_3250 M3Q_3251 PF12625 M3Q_3251 M3Q_3251 PF12833 Helix-turn-helix domain M3Q_3252 PF02525 Flavodoxin-like fold M3Q_3253 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M3Q_3254 PF12710 haloacid dehalogenase-like hydrolase M3Q_3255 PF01507 Phosphoadenosine phosphosulfate reductase family M3Q_3256 PF03007 M3Q_3256 M3Q_3256 PF06974 M3Q_3256 M3Q_3258 PF00575 S1 RNA binding domain M3Q_3258 PF10150 Ribonuclease E/G family M3Q_3259 PF02545 Maf-like protein M3Q_326 PF00593 TonB dependent receptor M3Q_326 PF07715 TonB-dependent Receptor Plug Domain M3Q_3260 PF04093 M3Q_3260 M3Q_3261 PF04085 rod shape-determining protein MreC M3Q_3262 PF06723 MreB/Mbl protein M3Q_3263 PF02686 Glu-tRNAGln amidotransferase C subunit M3Q_3264 PF01425 Amidase M3Q_3265 PF02637 GatB domain M3Q_3265 PF02934 GatB/GatE catalytic domain M3Q_3267 PF01965 DJ-1/PfpI family M3Q_3269 PF06674 M3Q_3269 M3Q_327 PF07786 M3Q_327 M3Q_3270 PF16142 M3Q_3270 M3Q_3271 PF05992 M3Q_3271 M3Q_3272 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_3273 PF01734 Patatin-like phospholipase M3Q_3274 PF01235 M3Q_3274 M3Q_3276 PF00881 Nitroreductase family M3Q_3277 PF07690 Major Facilitator Superfamily M3Q_3278 PF12805 M3Q_3278 M3Q_3278 PF13515 M3Q_3278 M3Q_3279 PF14317 M3Q_3279 M3Q_328 PF01037 AsnC family M3Q_328 PF13412 Winged helix-turn-helix DNA-binding M3Q_3280 PF00175 Oxidoreductase NAD-binding domain M3Q_3280 PF00258 Flavodoxin M3Q_3280 PF03929 M3Q_3280 M3Q_3281 PF02698 DUF218 domain M3Q_3282 PF03734 L,D-transpeptidase catalytic domain M3Q_3283 PF04304 M3Q_3283 M3Q_3284 PF08907 M3Q_3284 M3Q_3285 PF08085 M3Q_3285 M3Q_3286 PF01546 Peptidase family M20/M25/M40 M3Q_3286 PF07687 Peptidase dimerisation domain M3Q_3288 PF00072 Response regulator receiver domain M3Q_3288 PF01584 CheW-like domain M3Q_3288 PF01627 Hpt domain M3Q_3288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3289 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M3Q_329 PF01266 FAD dependent oxidoreductase M3Q_3290 PF01584 CheW-like domain M3Q_3291 PF00072 Response regulator receiver domain M3Q_3292 PF00072 Response regulator receiver domain M3Q_3294 PF13437 HlyD family secretion protein M3Q_3294 PF13533 Biotin-lipoyl like M3Q_3295 PF00873 AcrB/AcrD/AcrF family M3Q_3296 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3Q_3296 PF03129 Anticodon binding domain M3Q_3296 PF04073 Aminoacyl-tRNA editing domain M3Q_3297 PF07411 Domain of unknown function (DUF1508) M3Q_3298 PF03831 PhnA protein M3Q_3298 PF08274 PhnA Zinc-Ribbon M3Q_3299 PF04343 M3Q_3299 M3Q_33 PF07885 Ion channel M3Q_330 PF00842 Alanine racemase, C-terminal domain M3Q_330 PF01168 Alanine racemase, N-terminal domain M3Q_3300 PF08327 Activator of Hsp90 ATPase homolog 1-like protein M3Q_3301 PF01571 Aminomethyltransferase folate-binding domain M3Q_3302 PF10411 Disulfide bond isomerase protein N-terminus M3Q_3302 PF13098 Thioredoxin-like domain M3Q_3303 PF08238 Sel1 repeat M3Q_3304 PF03547 M3Q_3304 M3Q_3305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_3306 PF00593 TonB dependent receptor M3Q_3306 PF07715 TonB-dependent Receptor Plug Domain M3Q_3308 PF04228 M3Q_3308 M3Q_3309 PF05661 M3Q_3309 M3Q_331 PF01042 Endoribonuclease L-PSP M3Q_3310 PF00579 tRNA synthetases class I (W and Y) M3Q_3311 PF00549 CoA-ligase M3Q_3311 PF02629 CoA binding domain M3Q_3312 PF00549 CoA-ligase M3Q_3312 PF08442 ATP-grasp domain M3Q_3313 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_3313 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3314 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_3314 PF00364 Biotin-requiring enzyme M3Q_3314 PF02817 e3 binding domain M3Q_3316 PF02245 Methylpurine-DNA glycosylase (MPG) M3Q_3317 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M3Q_3317 PF06827 Zinc finger found in FPG and IleRS M3Q_3317 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M3Q_3318 PF00639 PPIC-type PPIASE domain M3Q_3319 PF06094 AIG2-like family M3Q_332 PF00324 Amino acid permease M3Q_3320 PF01741 Large-conductance mechanosensitive channel, MscL M3Q_3321 PF00009 Elongation factor Tu GTP binding domain M3Q_3321 PF00679 Elongation factor G C-terminus M3Q_3321 PF03144 Elongation factor Tu domain 2 M3Q_3322 PF00860 Permease family M3Q_3323 PF05175 Methyltransferase small domain M3Q_3323 PF08468 Methyltransferase small domain N-terminal M3Q_3324 PF00324 Amino acid permease M3Q_3325 PF01139 tRNA-splicing ligase RtcB M3Q_3327 PF00691 OmpA family M3Q_3327 PF13505 Outer membrane protein beta-barrel domain M3Q_3328 PF12019 Type II transport protein GspH M3Q_3329 PF00108 Thiolase, N-terminal domain M3Q_3329 PF02803 Thiolase, C-terminal domain M3Q_333 PF00324 Amino acid permease M3Q_3330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_3331 PF00893 Small Multidrug Resistance protein M3Q_3332 PF06073 M3Q_3332 M3Q_3333 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M3Q_3333 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M3Q_3334 PF01011 PQQ enzyme repeat M3Q_3334 PF13360 PQQ-like domain M3Q_3335 PF04966 Carbohydrate-selective porin, OprB family M3Q_3336 PF02515 CoA-transferase family III M3Q_3337 PF12625 M3Q_3337 M3Q_3337 PF12833 Helix-turn-helix domain M3Q_3338 PF00108 Thiolase, N-terminal domain M3Q_3338 PF02803 Thiolase, C-terminal domain M3Q_3339 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_3339 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_3339 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_334 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_334 PF03466 LysR substrate binding domain M3Q_3341 PF01734 Patatin-like phospholipase M3Q_3342 PF13673 Acetyltransferase (GNAT) domain M3Q_3343 PF13679 M3Q_3343 M3Q_3345 PF03006 M3Q_3345 M3Q_3346 PF00083 Sugar (and other) transporter M3Q_3348 PF01043 SecA preprotein cross-linking domain M3Q_3348 PF02810 SEC-C motif M3Q_3348 PF07516 SecA Wing and Scaffold domain M3Q_3348 PF07517 SecA DEAD-like domain M3Q_3349 PF00578 AhpC/TSA family M3Q_3349 PF10417 C-terminal domain of 1-Cys peroxiredoxin M3Q_335 PF00171 Aldehyde dehydrogenase family M3Q_3350 PF00753 Metallo-beta-lactamase superfamily M3Q_3351 PF00782 Dual specificity phosphatase, catalytic domain M3Q_3352 PF05036 Sporulation related domain M3Q_3353 PF08245 Mur ligase middle domain M3Q_3354 PF01039 Carboxyl transferase domain M3Q_3355 PF00290 Tryptophan synthase alpha chain M3Q_3356 PF12625 M3Q_3356 M3Q_3356 PF12833 Helix-turn-helix domain M3Q_3357 PF10118 M3Q_3357 M3Q_3358 PF10974 M3Q_3358 M3Q_3359 PF07566 Domain of Unknown Function (DUF1543) M3Q_336 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M3Q_336 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M3Q_3360 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_3361 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M3Q_3362 PF00593 TonB dependent receptor M3Q_3362 PF07715 TonB-dependent Receptor Plug Domain M3Q_3363 PF01923 Cobalamin adenosyltransferase M3Q_3364 PF03009 Glycerophosphoryl diester phosphodiesterase family M3Q_3365 PF03724 META domain M3Q_3366 PF00487 M3Q_3366 M3Q_3367 PF02696 M3Q_3367 M3Q_3368 PF00072 Response regulator receiver domain M3Q_3368 PF00486 Transcriptional regulatory protein, C terminal M3Q_3369 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_337 PF00501 AMP-binding enzyme M3Q_337 PF13193 AMP-binding enzyme C-terminal domain M3Q_3371 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3371 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3371 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3371 PF12418 M3Q_3371 M3Q_3371 PF12806 M3Q_3371 M3Q_3372 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3372 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3372 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3372 PF12418 M3Q_3372 M3Q_3372 PF12806 M3Q_3372 M3Q_3373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3373 PF03466 LysR substrate binding domain M3Q_3374 PF00043 Glutathione S-transferase, C-terminal domain M3Q_3374 PF02798 Glutathione S-transferase, N-terminal domain M3Q_3375 PF06146 M3Q_3375 M3Q_3376 PF11776 Domain of unknown function (DUF3315) M3Q_3378 PF13091 PLD-like domain M3Q_3379 PF00593 TonB dependent receptor M3Q_3379 PF07715 TonB-dependent Receptor Plug Domain M3Q_338 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_338 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_338 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3380 PF13803 M3Q_3380 M3Q_3381 PF00152 tRNA synthetases class II (D, K and N) M3Q_3381 PF01336 OB-fold nucleic acid binding domain M3Q_3381 PF02938 GAD domain M3Q_3382 PF11380 M3Q_3382 M3Q_3382 PF17102 M3Q_3382 M3Q_3385 PF01755 M3Q_3385 M3Q_3387 PF00534 Glycosyl transferases group 1 M3Q_3387 PF13439 Glycosyltransferase Family 4 M3Q_3388 PF00535 Glycosyl transferase family 2 M3Q_3389 PF01522 Polysaccharide deacetylase M3Q_339 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_3390 PF13524 Glycosyl transferases group 1 M3Q_3391 PF06258 M3Q_3391 M3Q_3392 PF01063 Aminotransferase class IV M3Q_3393 PF03710 Glutamate-ammonia ligase adenylyltransferase M3Q_3393 PF08335 GlnD PII-uridylyltransferase M3Q_3394 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3395 PF02547 Queuosine biosynthesis protein M3Q_3397 PF04011 LemA family M3Q_3398 PF01702 Queuine tRNA-ribosyltransferase M3Q_3399 PF02699 Preprotein translocase subunit M3Q_34 PF00474 Sodium:solute symporter family M3Q_340 PF16113 M3Q_340 M3Q_3400 PF02355 Protein export membrane protein M3Q_3400 PF07549 SecD/SecF GG Motif M3Q_3400 PF13721 SecD export protein N-terminal TM region M3Q_3401 PF02355 Protein export membrane protein M3Q_3401 PF07549 SecD/SecF GG Motif M3Q_3402 PF02441 Flavoprotein M3Q_3402 PF04127 DNA / pantothenate metabolism flavoprotein M3Q_3403 PF04002 RadC-like JAB domain M3Q_3404 PF01062 M3Q_3404 M3Q_3405 PF02811 PHP domain M3Q_3406 PF04279 M3Q_3406 M3Q_3407 PF03795 YCII-related domain M3Q_3409 PF01266 FAD dependent oxidoreductase M3Q_3409 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M3Q_341 PF07690 Major Facilitator Superfamily M3Q_3410 PF00581 Rhodanese-like domain M3Q_3411 PF04461 Protein of unknown function (DUF520) M3Q_3412 PF14539 Domain of unknown function (DUF4442) M3Q_3413 PF03061 Thioesterase superfamily M3Q_3414 PF00085 Thioredoxin M3Q_3415 PF12146 Putative lysophospholipase M3Q_3416 PF04273 Putative phosphatase (DUF442) M3Q_3418 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M3Q_3418 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3419 PF13689 M3Q_3419 M3Q_342 PF00765 Autoinducer synthetase M3Q_3420 PF00990 GGDEF domain M3Q_3420 PF17152 M3Q_3420 M3Q_3421 PF00691 OmpA family M3Q_3422 PF00149 Calcineurin-like phosphoesterase M3Q_3423 PF13091 PLD-like domain M3Q_3424 PF01553 Acyltransferase M3Q_3425 PF01926 50S ribosome-binding GTPase M3Q_3427 PF04172 M3Q_3427 M3Q_3428 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) M3Q_3429 PF00149 Calcineurin-like phosphoesterase M3Q_343 PF16245 M3Q_343 M3Q_3430 PF00398 Ribosomal RNA adenine dimethylase M3Q_3431 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M3Q_3432 PF00572 Ribosomal protein L13 M3Q_3433 PF00380 Ribosomal protein S9/S16 M3Q_3434 PF02798 Glutathione S-transferase, N-terminal domain M3Q_3435 PF04386 Stringent starvation protein B M3Q_3437 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M3Q_3437 PF00364 Biotin-requiring enzyme M3Q_3437 PF02785 Biotin carboxylase C-terminal domain M3Q_3437 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M3Q_3438 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_3439 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3439 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3439 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_344 PF00196 Bacterial regulatory proteins, luxR family M3Q_344 PF03472 Autoinducer binding domain M3Q_3440 PF01039 Carboxyl transferase domain M3Q_3441 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_3442 PF07287 M3Q_3442 M3Q_3443 PF00440 Bacterial regulatory proteins, tetR family M3Q_3444 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3444 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3444 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3445 PF14066 M3Q_3445 M3Q_3446 PF09413 Domain of unknown function (DUF2007) M3Q_3448 PF01066 CDP-alcohol phosphatidyltransferase M3Q_3449 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ M3Q_345 PF00501 AMP-binding enzyme M3Q_3450 PF13640 2OG-Fe(II) oxygenase superfamily M3Q_3452 PF10982 Protein of unknown function (DUF2789) M3Q_3453 PF00056 lactate/malate dehydrogenase, NAD binding domain M3Q_3453 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M3Q_3454 PF00445 Ribonuclease T2 family M3Q_3455 PF01464 Transglycosylase SLT domain M3Q_3456 PF00919 Uncharacterized protein family UPF0004 M3Q_3456 PF01938 TRAM domain M3Q_3456 PF04055 Radical SAM superfamily M3Q_3457 PF02562 PhoH-like protein M3Q_3458 PF02130 Uncharacterized protein family UPF0054 M3Q_3459 PF03544 Gram-negative bacterial TonB protein C-terminal M3Q_346 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_346 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3461 PF11306 Protein of unknown function (DUF3108) M3Q_3463 PF03358 NADPH-dependent FMN reductase M3Q_3464 PF03631 M3Q_3464 M3Q_3465 PF00892 EamA-like transporter family M3Q_3466 PF02311 AraC-like ligand binding domain M3Q_3466 PF12833 Helix-turn-helix domain M3Q_3467 PF01557 Fumarylacetoacetate (FAA) hydrolase family M3Q_3469 PF00881 Nitroreductase family M3Q_347 PF00550 Phosphopantetheine attachment site M3Q_3471 PF12710 haloacid dehalogenase-like hydrolase M3Q_3472 PF00575 S1 RNA binding domain M3Q_3472 PF00773 RNB domain M3Q_3472 PF08206 Ribonuclease B OB domain M3Q_3473 PF01432 Peptidase family M3 M3Q_3474 PF09526 M3Q_3474 M3Q_3476 PF06808 M3Q_3476 M3Q_3477 PF01694 Rhomboid family M3Q_348 PF00668 Condensation domain M3Q_3481 PF03937 Flavinator of succinate dehydrogenase M3Q_3482 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3482 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3482 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3483 PF00743 Flavin-binding monooxygenase-like M3Q_3483 PF13450 NAD(P)-binding Rossmann-like domain M3Q_3484 PF01196 Ribosomal protein L17 M3Q_3485 PF01000 RNA polymerase Rpb3/RpoA insert domain M3Q_3485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M3Q_3485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M3Q_3486 PF00163 Ribosomal protein S4/S9 N-terminal domain M3Q_3486 PF01479 S4 domain M3Q_3487 PF00411 Ribosomal protein S11 M3Q_3488 PF00416 Ribosomal protein S13/S18 M3Q_3489 PF00444 Ribosomal protein L36 M3Q_349 PF00501 AMP-binding enzyme M3Q_349 PF00550 Phosphopantetheine attachment site M3Q_349 PF00975 Thioesterase domain M3Q_349 PF13193 AMP-binding enzyme C-terminal domain M3Q_3490 PF00344 SecY translocase M3Q_3491 PF00828 Ribosomal protein L18e/L15 M3Q_3492 PF00327 Ribosomal protein L30p/L7e M3Q_3493 PF00333 Ribosomal protein S5, N-terminal domain M3Q_3493 PF03719 Ribosomal protein S5, C-terminal domain M3Q_3494 PF00861 Ribosomal L18p/L5e family M3Q_3495 PF00347 Ribosomal protein L6 M3Q_3496 PF00410 Ribosomal protein S8 M3Q_3497 PF00253 Ribosomal protein S14p/S29e M3Q_3498 PF00281 Ribosomal protein L5 M3Q_3498 PF00673 ribosomal L5P family C-terminus M3Q_3499 PF00467 KOW motif M3Q_3499 PF17136 M3Q_3499 M3Q_35 PF04341 M3Q_35 M3Q_350 PF03176 MMPL family M3Q_350 PF10604 Polyketide cyclase / dehydrase and lipid transport M3Q_350 PF17131 M3Q_350 M3Q_3500 PF00238 Ribosomal protein L14p/L23e M3Q_3501 PF00366 Ribosomal protein S17 M3Q_3502 PF00831 Ribosomal L29 protein M3Q_3503 PF00252 Ribosomal protein L16p/L10e M3Q_3504 PF00189 Ribosomal protein S3, C-terminal domain M3Q_3504 PF07650 KH domain M3Q_3505 PF00237 Ribosomal protein L22p/L17e M3Q_3506 PF00203 Ribosomal protein S19 M3Q_3507 PF00181 Ribosomal Proteins L2, RNA binding domain M3Q_3507 PF03947 Ribosomal Proteins L2, C-terminal domain M3Q_3508 PF00276 Ribosomal protein L23 M3Q_3509 PF00573 Ribosomal protein L4/L1 family M3Q_3510 PF00297 Ribosomal protein L3 M3Q_3511 PF00338 Ribosomal protein S10p/S20e M3Q_3512 PF00117 Glutamine amidotransferase class-I M3Q_3513 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_3514 PF05872 M3Q_3514 M3Q_3515 PF00042 Globin M3Q_3516 PF02082 Transcriptional regulator M3Q_3517 PF01926 50S ribosome-binding GTPase M3Q_3518 PF10118 M3Q_3518 M3Q_3519 PF00375 Sodium:dicarboxylate symporter family M3Q_352 PF01370 NAD dependent epimerase/dehydratase family M3Q_352 PF12697 Alpha/beta hydrolase family M3Q_3520 PF13622 Thioesterase-like superfamily M3Q_3521 PF01553 Acyltransferase M3Q_3523 PF13460 NADH(P)-binding M3Q_3524 PF00270 DEAD/DEAH box helicase M3Q_3524 PF00271 Helicase conserved C-terminal domain M3Q_3524 PF17191 M3Q_3524 M3Q_3525 PF00156 Phosphoribosyl transferase domain M3Q_3526 PF00293 NUDIX domain M3Q_3527 PF03641 Possible lysine decarboxylase M3Q_3528 PF01544 CorA-like Mg2+ transporter protein M3Q_353 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_3530 PF05494 Toluene tolerance, Ttg2 M3Q_3531 PF02470 M3Q_3531 M3Q_3532 PF02405 M3Q_3532 M3Q_3533 PF00005 ABC transporter M3Q_3534 PF00270 DEAD/DEAH box helicase M3Q_3534 PF00271 Helicase conserved C-terminal domain M3Q_3535 PF00459 Inositol monophosphatase family M3Q_3536 PF02779 Transketolase, pyrimidine binding domain M3Q_3536 PF02780 Transketolase, C-terminal domain M3Q_3536 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M3Q_3537 PF00925 GTP cyclohydrolase II M3Q_3538 PF01218 Coproporphyrinogen III oxidase M3Q_3539 PF01488 Shikimate / quinate 5-dehydrogenase M3Q_3539 PF08501 Shikimate dehydrogenase substrate binding domain M3Q_354 PF01722 BolA-like protein M3Q_3541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_3541 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_3541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_3541 PF12418 M3Q_3541 M3Q_3541 PF12806 M3Q_3541 M3Q_3543 PF04024 M3Q_3543 M3Q_3544 PF00571 CBS domain M3Q_3544 PF04982 M3Q_3544 M3Q_3545 PF13566 M3Q_3545 M3Q_3547 PF07007 Protein of unknown function (DUF1311) M3Q_3549 PF02091 Glycyl-tRNA synthetase alpha subunit M3Q_355 PF04247 M3Q_355 M3Q_3550 PF02092 M3Q_3550 M3Q_3550 PF05746 DALR anticodon binding domain M3Q_3551 PF03795 YCII-related domain M3Q_3552 PF00892 EamA-like transporter family M3Q_3553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_3553 PF03466 LysR substrate binding domain M3Q_3556 PF00082 Subtilase family M3Q_3559 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M3Q_356 PF00668 Condensation domain M3Q_3560 PF04996 Succinylarginine dihydrolase M3Q_3561 PF00171 Aldehyde dehydrogenase family M3Q_3562 PF04958 Arginine N-succinyltransferase beta subunit M3Q_3563 PF00202 Aminotransferase class-III M3Q_3564 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3Q_3564 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M3Q_3565 PF00324 Amino acid permease M3Q_3567 PF08241 Methyltransferase domain M3Q_357 PF04286 M3Q_357 M3Q_3570 PF10107 M3Q_3570 M3Q_3571 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M3Q_3572 PF01594 M3Q_3572 M3Q_3573 PF00080 Copper/zinc superoxide dismutase (SODC) M3Q_3574 PF12805 M3Q_3574 M3Q_3574 PF13515 M3Q_3574 M3Q_3575 PF07690 Major Facilitator Superfamily M3Q_3577 PF02525 Flavodoxin-like fold M3Q_3578 PF03992 Antibiotic biosynthesis monooxygenase M3Q_358 PF07681 M3Q_358 M3Q_3580 PF01565 FAD binding domain M3Q_3580 PF02913 FAD linked oxidases, C-terminal domain M3Q_3581 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M3Q_3581 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M3Q_3582 PF00892 EamA-like transporter family M3Q_3583 PF00892 EamA-like transporter family M3Q_3584 PF01814 Hemerythrin HHE cation binding domain M3Q_3585 PF01925 M3Q_3585 M3Q_3586 PF01509 TruB family pseudouridylate synthase (N terminal domain) M3Q_3586 PF09157 Pseudouridine synthase II TruB, C-terminal M3Q_3586 PF16198 M3Q_3586 M3Q_3587 PF03280 Proteobacterial lipase chaperone protein M3Q_3588 PF00561 alpha/beta hydrolase fold M3Q_3589 PF01245 Ribosomal protein L19 M3Q_359 PF09335 M3Q_359 M3Q_3590 PF01746 tRNA (Guanine-1)-methyltransferase M3Q_3591 PF01782 RimM N-terminal domain M3Q_3591 PF05239 PRC-barrel domain M3Q_3592 PF00886 Ribosomal protein S16 M3Q_3593 PF07963 Prokaryotic N-terminal methylation motif M3Q_3593 PF16732 M3Q_3593 M3Q_3594 PF07963 Prokaryotic N-terminal methylation motif M3Q_3594 PF16732 M3Q_3594 M3Q_3595 PF05567 Neisseria PilC beta-propeller domain M3Q_3595 PF13519 von Willebrand factor type A domain M3Q_3597 PF07963 Prokaryotic N-terminal methylation motif M3Q_3597 PF16074 M3Q_3597 M3Q_3598 PF07963 Prokaryotic N-terminal methylation motif M3Q_3599 PF07963 Prokaryotic N-terminal methylation motif M3Q_3599 PF12019 Type II transport protein GspH M3Q_36 PF00072 Response regulator receiver domain M3Q_36 PF00512 His Kinase A (phospho-acceptor) domain M3Q_36 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_36 PF12860 M3Q_36 M3Q_360 PF01810 M3Q_360 M3Q_3600 PF02401 LytB protein M3Q_3601 PF00625 Guanylate kinase M3Q_3602 PF01192 RNA polymerase Rpb6 M3Q_3603 PF02824 TGS domain M3Q_3603 PF13328 HD domain M3Q_3604 PF01042 Endoribonuclease L-PSP M3Q_3605 PF04324 BFD-like [2Fe-2S] binding domain M3Q_3606 PF00210 Ferritin-like domain M3Q_3607 PF04932 M3Q_3607 M3Q_3607 PF11846 M3Q_3607 M3Q_3607 PF15864 M3Q_3607 M3Q_3608 PF04932 M3Q_3608 M3Q_3609 PF00114 Pilin (bacterial filament) M3Q_3609 PF07963 Prokaryotic N-terminal methylation motif M3Q_3610 PF04536 TLP18 M3Q_3611 PF04536 TLP18 M3Q_3612 PF04011 LemA family M3Q_3613 PF10118 M3Q_3613 M3Q_3614 PF07992 Pyridine nucleotide-disulphide oxidoreductase M3Q_3614 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M3Q_3615 PF00310 Glutamine amidotransferases class-II M3Q_3615 PF01493 GXGXG motif M3Q_3615 PF01645 Conserved region in glutamate synthase M3Q_3615 PF04898 Glutamate synthase central domain M3Q_3617 PF01761 3-dehydroquinate synthase M3Q_3618 PF01202 Shikimate kinase M3Q_3619 PF00263 M3Q_3619 M3Q_3619 PF03958 Bacterial type II/III secretion system short domain M3Q_3619 PF07660 Secretin and TonB N terminus short domain M3Q_3619 PF11741 AMIN domain M3Q_362 PF13614 AAA domain M3Q_3620 PF04351 Pilus assembly protein, PilP M3Q_3621 PF04350 Pilus assembly protein, PilO M3Q_3622 PF05137 M3Q_3622 M3Q_3623 PF11104 Type IV pilus assembly protein PilM; M3Q_3624 PF00905 Penicillin binding protein transpeptidase domain M3Q_3624 PF00912 Transglycosylase M3Q_3624 PF17092 M3Q_3624 M3Q_3625 PF08241 Methyltransferase domain M3Q_3627 PF00953 Glycosyl transferase family 4 M3Q_3628 PF01225 Mur ligase family, catalytic domain M3Q_3628 PF02875 Mur ligase family, glutamate ligase domain M3Q_3628 PF08245 Mur ligase middle domain M3Q_3629 PF02875 Mur ligase family, glutamate ligase domain M3Q_3629 PF08245 Mur ligase middle domain M3Q_363 PF04247 M3Q_363 M3Q_3630 PF00905 Penicillin binding protein transpeptidase domain M3Q_3630 PF03717 Penicillin-binding Protein dimerisation domain M3Q_3631 PF04999 M3Q_3631 M3Q_3632 PF01795 MraW methylase family M3Q_3633 PF13531 Bacterial extracellular solute-binding protein M3Q_3635 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3Q_3636 PF00324 Amino acid permease M3Q_364 PF01722 BolA-like protein M3Q_3640 PF01545 Cation efflux family M3Q_3641 PF00873 AcrB/AcrD/AcrF family M3Q_3642 PF16576 M3Q_3642 M3Q_3643 PF02321 Outer membrane efflux protein M3Q_3645 PF04191 Phospholipid methyltransferase M3Q_3649 PF08238 Sel1 repeat M3Q_365 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_3650 PF00005 ABC transporter M3Q_3650 PF12848 ABC transporter M3Q_3651 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_3652 PF00106 short chain dehydrogenase M3Q_3653 PF00484 Carbonic anhydrase M3Q_3653 PF00916 M3Q_3653 M3Q_3654 PF00575 S1 RNA binding domain M3Q_3654 PF12836 Helix-hairpin-helix motif M3Q_3654 PF16921 M3Q_3654 M3Q_3656 PF08238 Sel1 repeat M3Q_3657 PF00005 ABC transporter M3Q_3657 PF12848 ABC transporter M3Q_3658 PF01053 Cys/Met metabolism PLP-dependent enzyme M3Q_3659 PF00106 short chain dehydrogenase M3Q_366 PF01370 NAD dependent epimerase/dehydratase family M3Q_366 PF12697 Alpha/beta hydrolase family M3Q_3660 PF00484 Carbonic anhydrase M3Q_3660 PF00916 M3Q_3660 M3Q_3661 PF00575 S1 RNA binding domain M3Q_3661 PF09371 Tex-like protein N-terminal domain M3Q_3661 PF12836 Helix-hairpin-helix motif M3Q_3661 PF16921 M3Q_3661 M3Q_3662 PF00072 Response regulator receiver domain M3Q_3662 PF00486 Transcriptional regulatory protein, C terminal M3Q_3663 PF00512 His Kinase A (phospho-acceptor) domain M3Q_3663 PF00672 HAMP domain M3Q_3663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_3664 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M3Q_3664 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M3Q_3665 PF00583 Acetyltransferase (GNAT) family M3Q_3666 PF12568 Acetyltransferase (GNAT) domain M3Q_3667 PF00475 Imidazoleglycerol-phosphate dehydratase M3Q_3668 PF00117 Glutamine amidotransferase class-I M3Q_3669 PF05656 M3Q_3669 M3Q_3670 PF01612 3'-5' exonuclease M3Q_3671 PF00977 Histidine biosynthesis protein M3Q_3672 PF01381 Helix-turn-helix M3Q_3672 PF07883 Cupin domain M3Q_3673 PF00892 EamA-like transporter family M3Q_3674 PF03992 Antibiotic biosynthesis monooxygenase M3Q_3676 PF00313 'Cold-shock' DNA-binding domain M3Q_3676 PF06961 M3Q_3676 M3Q_3677 PF01636 Phosphotransferase enzyme family M3Q_3678 PF00977 Histidine biosynthesis protein M3Q_368 PF03176 MMPL family M3Q_368 PF10604 Polyketide cyclase / dehydrase and lipid transport M3Q_368 PF17131 M3Q_368 M3Q_3680 PF12625 M3Q_3680 M3Q_3680 PF12833 Helix-turn-helix domain M3Q_3681 PF00230 Major intrinsic protein M3Q_3683 PF01810 M3Q_3683 M3Q_3684 PF01223 DNA/RNA non-specific endonuclease M3Q_3686 PF02705 M3Q_3686 M3Q_3689 PF02525 Flavodoxin-like fold M3Q_369 PF00501 AMP-binding enzyme M3Q_369 PF00550 Phosphopantetheine attachment site M3Q_369 PF00975 Thioesterase domain M3Q_369 PF13193 AMP-binding enzyme C-terminal domain M3Q_3690 PF01638 HxlR-like helix-turn-helix M3Q_3693 PF08238 Sel1 repeat M3Q_3694 PF00440 Bacterial regulatory proteins, tetR family M3Q_3695 PF12833 Helix-turn-helix domain M3Q_3696 PF00248 Aldo/keto reductase family M3Q_370 PF00668 Condensation domain M3Q_371 PF00950 M3Q_371 M3Q_372 PF00005 ABC transporter M3Q_373 PF01475 Ferric uptake regulator family M3Q_374 PF01297 Periplasmic solute binding protein family M3Q_375 PF03899 M3Q_375 M3Q_376 PF00119 ATP synthase A chain M3Q_377 PF00137 ATP synthase subunit C M3Q_378 PF00430 ATP synthase B/B' CF(0) M3Q_379 PF00213 ATP synthase delta (OSCP) subunit M3Q_38 PF00072 Response regulator receiver domain M3Q_38 PF00196 Bacterial regulatory proteins, luxR family M3Q_380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3Q_380 PF00306 ATP synthase alpha/beta chain, C terminal domain M3Q_380 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3Q_381 PF00231 ATP synthase M3Q_382 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3Q_382 PF02874 ATP synthase alpha/beta family, beta-barrel domain M3Q_383 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M3Q_385 PF00255 Glutathione peroxidase M3Q_386 PF12833 Helix-turn-helix domain M3Q_387 PF07690 Major Facilitator Superfamily M3Q_388 PF00440 Bacterial regulatory proteins, tetR family M3Q_389 PF00892 EamA-like transporter family M3Q_39 PF03358 NADPH-dependent FMN reductase M3Q_390 PF01300 Telomere recombination M3Q_391 PF02481 DNA recombination-mediator protein A M3Q_392 PF01476 LysM domain M3Q_393 PF01327 Polypeptide deformylase M3Q_394 PF11162 M3Q_394 M3Q_395 PF00593 TonB dependent receptor M3Q_395 PF07715 TonB-dependent Receptor Plug Domain M3Q_397 PF09995 M3Q_397 M3Q_398 PF00440 Bacterial regulatory proteins, tetR family M3Q_4 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_4 PF03466 LysR substrate binding domain M3Q_40 PF00296 Luciferase-like monooxygenase M3Q_400 PF00248 Aldo/keto reductase family M3Q_401 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_401 PF03466 LysR substrate binding domain M3Q_403 PF00155 Aminotransferase class I and II M3Q_403 PF00392 Bacterial regulatory proteins, gntR family M3Q_404 PF00107 Zinc-binding dehydrogenase M3Q_404 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_405 PF03352 Methyladenine glycosylase M3Q_407 PF01551 Peptidase family M23 M3Q_408 PF00633 Helix-hairpin-helix motif M3Q_408 PF00730 HhH-GPD superfamily base excision DNA repair protein M3Q_408 PF14815 NUDIX domain M3Q_409 PF01230 HIT domain M3Q_41 PF00872 M3Q_41 M3Q_410 PF01738 Dienelactone hydrolase family M3Q_411 PF07043 M3Q_411 M3Q_412 PF03692 M3Q_412 M3Q_413 PF07995 Glucose / Sorbosone dehydrogenase M3Q_414 PF00004 ATPase family associated with various cellular activities (AAA) M3Q_414 PF12002 MgsA AAA+ ATPase C terminal M3Q_414 PF16193 M3Q_414 M3Q_415 PF01226 Formate/nitrite transporter M3Q_417 PF01259 SAICAR synthetase M3Q_419 PF00701 Dihydrodipicolinate synthetase family M3Q_42 PF13412 Winged helix-turn-helix DNA-binding M3Q_420 PF00857 Isochorismatase family M3Q_421 PF01758 Sodium Bile acid symporter family M3Q_422 PF01554 MatE M3Q_423 PF04463 M3Q_423 M3Q_424 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_424 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal M3Q_425 PF01614 Bacterial transcriptional regulator M3Q_425 PF09339 IclR helix-turn-helix domain M3Q_426 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M3Q_427 PF02798 Glutathione S-transferase, N-terminal domain M3Q_427 PF14497 Glutathione S-transferase, C-terminal domain M3Q_428 PF01557 Fumarylacetoacetate (FAA) hydrolase family M3Q_429 PF03595 Voltage-dependent anion channel M3Q_43 PF00857 Isochorismatase family M3Q_430 PF00521 DNA gyrase/topoisomerase IV, subunit A M3Q_430 PF03989 DNA gyrase C-terminal domain, beta-propeller M3Q_431 PF00501 AMP-binding enzyme M3Q_431 PF13193 AMP-binding enzyme C-terminal domain M3Q_433 PF01124 MAPEG family M3Q_434 PF00719 Inorganic pyrophosphatase M3Q_435 PF03573 outer membrane porin, OprD family M3Q_437 PF09694 M3Q_437 M3Q_438 PF00701 Dihydrodipicolinate synthetase family M3Q_439 PF00596 Class II Aldolase and Adducin N-terminal domain M3Q_44 PF00501 AMP-binding enzyme M3Q_44 PF13193 AMP-binding enzyme C-terminal domain M3Q_44 PF16177 M3Q_44 M3Q_440 PF00155 Aminotransferase class I and II M3Q_440 PF00392 Bacterial regulatory proteins, gntR family M3Q_441 PF01078 Magnesium chelatase, subunit ChlI M3Q_441 PF13335 M3Q_441 M3Q_442 PF08721 TnsA endonuclease C terminal M3Q_442 PF08722 TnsA endonuclease N terminal M3Q_443 PF00665 Integrase core domain M3Q_443 PF09299 Mu transposase, C-terminal M3Q_444 PF05621 M3Q_444 M3Q_447 PF00582 Universal stress protein family M3Q_448 PF00916 M3Q_448 M3Q_448 PF01740 STAS domain M3Q_45 PF05656 M3Q_45 M3Q_452 PF06414 Zeta toxin M3Q_454 PF00589 Phage integrase family M3Q_454 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_458 PF08721 TnsA endonuclease C terminal M3Q_458 PF08722 TnsA endonuclease N terminal M3Q_459 PF00665 Integrase core domain M3Q_46 PF00924 Mechanosensitive ion channel M3Q_460 PF09299 Mu transposase, C-terminal M3Q_463 PF01609 Transposase DDE domain M3Q_464 PF00809 Pterin binding enzyme M3Q_465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_466 PF08721 TnsA endonuclease C terminal M3Q_466 PF08722 TnsA endonuclease N terminal M3Q_467 PF00665 Integrase core domain M3Q_467 PF09299 Mu transposase, C-terminal M3Q_468 PF05621 M3Q_468 M3Q_469 PF06527 M3Q_469 M3Q_47 PF04452 RNA methyltransferase M3Q_473 PF00582 Universal stress protein family M3Q_474 PF00916 M3Q_474 M3Q_474 PF01740 STAS domain M3Q_476 PF07690 Major Facilitator Superfamily M3Q_477 PF00440 Bacterial regulatory proteins, tetR family M3Q_477 PF02909 Tetracyclin repressor, C-terminal all-alpha domain M3Q_479 PF04986 M3Q_479 M3Q_479 PF14319 M3Q_479 M3Q_48 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M3Q_481 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M3Q_482 PF01636 Phosphotransferase enzyme family M3Q_484 PF01078 Magnesium chelatase, subunit ChlI M3Q_484 PF13541 Subunit ChlI of Mg-chelatase M3Q_485 PF04380 M3Q_485 M3Q_486 PF00543 Nitrogen regulatory protein P-II M3Q_487 PF00909 Ammonium Transporter Family M3Q_488 PF03477 ATP cone domain M3Q_489 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M3Q_489 PF01872 RibD C-terminal domain M3Q_49 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M3Q_490 PF02086 D12 class N6 adenine-specific DNA methyltransferase M3Q_491 PF00677 Lumazine binding domain M3Q_494 PF04364 DNA polymerase III chi subunit, HolC M3Q_495 PF00883 Cytosol aminopeptidase family, catalytic domain M3Q_495 PF02789 Cytosol aminopeptidase family, N-terminal domain M3Q_496 PF03739 M3Q_496 M3Q_497 PF03739 M3Q_497 M3Q_498 PF01676 Metalloenzyme superfamily M3Q_498 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M3Q_499 PF03572 Peptidase family S41 M3Q_5 PF07690 Major Facilitator Superfamily M3Q_50 PF12840 Helix-turn-helix domain M3Q_500 PF00072 Response regulator receiver domain M3Q_500 PF00158 Sigma-54 interaction domain M3Q_500 PF02954 Bacterial regulatory protein, Fis family M3Q_501 PF00512 His Kinase A (phospho-acceptor) domain M3Q_501 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_502 PF00072 Response regulator receiver domain M3Q_502 PF00196 Bacterial regulatory proteins, luxR family M3Q_503 PF00768 D-alanyl-D-alanine carboxypeptidase M3Q_504 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_505 PF00742 Homoserine dehydrogenase M3Q_505 PF01842 ACT domain M3Q_505 PF03447 Homoserine dehydrogenase, NAD binding domain M3Q_506 PF10411 Disulfide bond isomerase protein N-terminus M3Q_506 PF13098 Thioredoxin-like domain M3Q_507 PF00589 Phage integrase family M3Q_507 PF02899 Phage integrase, N-terminal SAM-like domain M3Q_508 PF04023 FeoA domain M3Q_509 PF02421 Ferrous iron transport protein B M3Q_509 PF07664 M3Q_509 M3Q_509 PF07670 Nucleoside recognition M3Q_511 PF02875 Mur ligase family, glutamate ligase domain M3Q_511 PF08245 Mur ligase middle domain M3Q_512 PF01098 M3Q_512 M3Q_513 PF00749 tRNA synthetases class I (E and Q), catalytic domain M3Q_514 PF01258 Prokaryotic dksA/traR C4-type zinc finger M3Q_515 PF00149 Calcineurin-like phosphoesterase M3Q_516 PF00293 NUDIX domain M3Q_517 PF01964 ThiC family M3Q_517 PF13667 ThiC-associated domain M3Q_519 PF00440 Bacterial regulatory proteins, tetR family M3Q_52 PF00472 RF-1 domain M3Q_52 PF03462 PCRF domain M3Q_520 PF00892 EamA-like transporter family M3Q_521 PF02321 Outer membrane efflux protein M3Q_522 PF01895 PhoU domain M3Q_523 PF04362 Bacterial Fe(2+) trafficking M3Q_524 PF00206 Lyase M3Q_524 PF14698 Argininosuccinate lyase C-terminal M3Q_525 PF06580 M3Q_525 M3Q_526 PF00072 Response regulator receiver domain M3Q_526 PF04397 LytTr DNA-binding domain M3Q_527 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M3Q_527 PF03900 Porphobilinogen deaminase, C-terminal domain M3Q_528 PF02602 Uroporphyrinogen-III synthase HemD M3Q_53 PF16956 M3Q_53 M3Q_531 PF13279 Thioesterase-like superfamily M3Q_532 PF00816 H-NS histone family M3Q_533 PF01203 M3Q_533 M3Q_534 PF11356 Type IV pilus biogenesis M3Q_535 PF00263 M3Q_535 M3Q_535 PF03958 Bacterial type II/III secretion system short domain M3Q_536 PF00498 FHA domain M3Q_537 PF13419 Haloacid dehalogenase-like hydrolase M3Q_538 PF00425 chorismate binding enzyme M3Q_538 PF04715 Anthranilate synthase component I, N terminal region M3Q_54 PF01368 DHH family M3Q_54 PF02272 DHHA1 domain M3Q_540 PF00009 Elongation factor Tu GTP binding domain M3Q_540 PF03143 Elongation factor Tu C-terminal domain M3Q_540 PF03144 Elongation factor Tu domain 2 M3Q_541 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M3Q_542 PF02357 Transcription termination factor nusG M3Q_543 PF00298 Ribosomal protein L11, RNA binding domain M3Q_543 PF03946 Ribosomal protein L11, N-terminal domain M3Q_544 PF00687 Ribosomal protein L1p/L10e family M3Q_545 PF00466 Ribosomal protein L10 M3Q_546 PF00542 Ribosomal protein L7/L12 C-terminal domain M3Q_546 PF16320 M3Q_546 M3Q_547 PF00562 RNA polymerase Rpb2, domain 6 M3Q_547 PF04560 RNA polymerase Rpb2, domain 7 M3Q_547 PF04561 RNA polymerase Rpb2, domain 2 M3Q_547 PF04563 RNA polymerase beta subunit M3Q_547 PF04565 RNA polymerase Rpb2, domain 3 M3Q_547 PF10385 RNA polymerase beta subunit external 1 domain M3Q_548 PF00623 RNA polymerase Rpb1, domain 2 M3Q_548 PF04983 RNA polymerase Rpb1, domain 3 M3Q_548 PF04997 RNA polymerase Rpb1, domain 1 M3Q_548 PF04998 RNA polymerase Rpb1, domain 5 M3Q_548 PF05000 RNA polymerase Rpb1, domain 4 M3Q_55 PF01243 Pyridoxamine 5'-phosphate oxidase M3Q_55 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M3Q_550 PF13441 M3Q_550 M3Q_551 PF14539 Domain of unknown function (DUF4442) M3Q_552 PF00561 alpha/beta hydrolase fold M3Q_553 PF03553 M3Q_553 M3Q_553 PF13726 M3Q_553 M3Q_554 PF03922 OmpW family M3Q_556 PF00183 Hsp90 protein M3Q_556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_559 PF01323 DSBA-like thioredoxin domain M3Q_56 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M3Q_56 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M3Q_56 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M3Q_56 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M3Q_561 PF13411 MerR HTH family regulatory protein M3Q_562 PF06821 Serine hydrolase M3Q_565 PF00108 Thiolase, N-terminal domain M3Q_565 PF02803 Thiolase, C-terminal domain M3Q_566 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_566 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M3Q_566 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M3Q_567 PF05118 Aspartyl/Asparaginyl beta-hydroxylase M3Q_57 PF00478 IMP dehydrogenase / GMP reductase domain M3Q_57 PF00571 CBS domain M3Q_570 PF01541 GIY-YIG catalytic domain M3Q_570 PF02151 UvrB/uvrC motif M3Q_570 PF08459 UvrC Helix-hairpin-helix N-terminal M3Q_570 PF14520 Helix-hairpin-helix domain M3Q_571 PF13622 Thioesterase-like superfamily M3Q_572 PF01066 CDP-alcohol phosphatidyltransferase M3Q_573 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3Q_573 PF12833 Helix-turn-helix domain M3Q_574 PF13532 2OG-Fe(II) oxygenase superfamily M3Q_575 PF01614 Bacterial transcriptional regulator M3Q_576 PF04632 M3Q_576 M3Q_577 PF07869 M3Q_577 M3Q_578 PF13437 HlyD family secretion protein M3Q_578 PF13533 Biotin-lipoyl like M3Q_579 PF03652 Uncharacterised protein family (UPF0081) M3Q_58 PF03692 M3Q_58 M3Q_580 PF02622 Uncharacterized ACR, COG1678 M3Q_581 PF02463 RecF/RecN/SMC N terminal domain M3Q_583 PF06865 Protein of unknown function (DUF1255) M3Q_584 PF00588 SpoU rRNA Methylase family M3Q_584 PF08032 RNA 2'-O ribose methyltransferase substrate binding M3Q_585 PF00892 EamA-like transporter family M3Q_586 PF01121 Dephospho-CoA kinase M3Q_587 PF01478 Type IV leader peptidase family M3Q_587 PF06750 M3Q_587 M3Q_588 PF00482 Type II secretion system (T2SS), protein F M3Q_589 PF00437 Type II/IV secretion system protein M3Q_589 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M3Q_59 PF00753 Metallo-beta-lactamase superfamily M3Q_590 PF00121 Triosephosphate isomerase M3Q_591 PF03840 Preprotein translocase SecG subunit M3Q_592 PF02576 Uncharacterised BCR, YhbC family COG0779 M3Q_592 PF17384 M3Q_592 M3Q_593 PF08529 NusA N-terminal domain M3Q_593 PF13184 NusA-like KH domain M3Q_593 PF14520 Helix-hairpin-helix domain M3Q_594 PF00009 Elongation factor Tu GTP binding domain M3Q_594 PF04760 Translation initiation factor IF-2, N-terminal region M3Q_594 PF08364 M3Q_594 M3Q_594 PF11987 Translation-initiation factor 2 M3Q_595 PF02033 Ribosome-binding factor A M3Q_596 PF03334 M3Q_596 M3Q_597 PF04066 M3Q_597 M3Q_598 PF01899 M3Q_598 M3Q_599 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M3Q_60 PF00593 TonB dependent receptor M3Q_60 PF07715 TonB-dependent Receptor Plug Domain M3Q_600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M3Q_601 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M3Q_601 PF04039 M3Q_601 M3Q_601 PF13244 M3Q_601 M3Q_602 PF13476 AAA domain M3Q_603 PF00580 UvrD/REP helicase N-terminal domain M3Q_603 PF13361 UvrD-like helicase C-terminal domain M3Q_604 PF01502 Phosphoribosyl-AMP cyclohydrolase M3Q_604 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M3Q_605 PF01494 FAD binding domain M3Q_606 PF03109 M3Q_606 M3Q_608 PF01209 ubiE/COQ5 methyltransferase family M3Q_61 PF01169 M3Q_61 M3Q_610 PF03976 Polyphosphate kinase 2 (PPK2) M3Q_612 PF04257 Exodeoxyribonuclease V, gamma subunit M3Q_613 PF00580 UvrD/REP helicase N-terminal domain M3Q_613 PF12705 PD-(D/E)XK nuclease superfamily M3Q_613 PF13361 UvrD-like helicase C-terminal domain M3Q_614 PF13538 UvrD-like helicase C-terminal domain M3Q_614 PF13604 AAA domain M3Q_615 PF00144 Beta-lactamase M3Q_616 PF00312 Ribosomal protein S15 M3Q_617 PF00013 KH domain M3Q_617 PF00575 S1 RNA binding domain M3Q_617 PF01138 3' exoribonuclease family, domain 1 M3Q_617 PF03725 3' exoribonuclease family, domain 2 M3Q_617 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M3Q_618 PF01544 CorA-like Mg2+ transporter protein M3Q_619 PF13591 MerR HTH family regulatory protein M3Q_620 PF00226 DnaJ domain M3Q_620 PF01556 DnaJ C terminal domain M3Q_621 PF01810 M3Q_621 M3Q_622 PF01430 Hsp33 protein M3Q_623 PF00999 Sodium/hydrogen exchanger family M3Q_623 PF02254 TrkA-N domain M3Q_624 PF00271 Helicase conserved C-terminal domain M3Q_624 PF04851 Type III restriction enzyme, res subunit M3Q_625 PF00482 Type II secretion system (T2SS), protein F M3Q_626 PF07963 Prokaryotic N-terminal methylation motif M3Q_626 PF08334 Type II secretion system (T2SS), protein G M3Q_628 PF01588 Putative tRNA binding domain M3Q_629 PF00795 Carbon-nitrogen hydrolase M3Q_63 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M3Q_63 PF00364 Biotin-requiring enzyme M3Q_63 PF02817 e3 binding domain M3Q_630 PF00571 CBS domain M3Q_630 PF03471 Transporter associated domain M3Q_631 PF01206 Sulfurtransferase TusA M3Q_632 PF01946 Thi4 family M3Q_632 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase M3Q_633 PF06938 Protein of unknown function (DUF1285) M3Q_634 PF01177 Asp/Glu/Hydantoin racemase M3Q_635 PF13271 M3Q_635 M3Q_636 PF00762 Ferrochelatase M3Q_637 PF00753 Metallo-beta-lactamase superfamily M3Q_638 PF03884 Domain of unknown function (DUF329) M3Q_639 PF02390 Putative methyltransferase M3Q_64 PF00456 Transketolase, thiamine diphosphate binding domain M3Q_640 PF03486 HI0933-like protein M3Q_641 PF04828 Glutathione-dependent formaldehyde-activating enzyme M3Q_642 PF02537 M3Q_642 M3Q_643 PF08888 HopJ type III effector protein M3Q_644 PF01197 Ribosomal protein L31 M3Q_645 PF03109 M3Q_645 M3Q_646 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_646 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_646 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_647 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M3Q_648 PF01554 MatE M3Q_649 PF04657 M3Q_649 M3Q_65 PF01551 Peptidase family M23 M3Q_650 PF04055 Radical SAM superfamily M3Q_650 PF06969 HemN C-terminal domain M3Q_651 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_652 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_652 PF03466 LysR substrate binding domain M3Q_653 PF00501 AMP-binding enzyme M3Q_653 PF13193 AMP-binding enzyme C-terminal domain M3Q_654 PF00575 S1 RNA binding domain M3Q_654 PF10150 Ribonuclease E/G family M3Q_655 PF00849 RNA pseudouridylate synthase M3Q_655 PF01479 S4 domain M3Q_656 PF13419 Haloacid dehalogenase-like hydrolase M3Q_657 PF08279 HTH domain M3Q_657 PF13280 M3Q_657 M3Q_658 PF02798 Glutathione S-transferase, N-terminal domain M3Q_658 PF14497 Glutathione S-transferase, C-terminal domain M3Q_659 PF07077 M3Q_659 M3Q_66 PF05258 M3Q_66 M3Q_660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_660 PF03466 LysR substrate binding domain M3Q_661 PF12706 Beta-lactamase superfamily domain M3Q_662 PF00141 Peroxidase M3Q_663 PF00391 PEP-utilising enzyme, mobile domain M3Q_663 PF02896 PEP-utilising enzyme, TIM barrel domain M3Q_663 PF05524 PEP-utilising enzyme, N-terminal M3Q_663 PF13185 GAF domain M3Q_664 PF00293 NUDIX domain M3Q_665 PF12710 haloacid dehalogenase-like hydrolase M3Q_668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_668 PF03466 LysR substrate binding domain M3Q_669 PF09834 M3Q_669 M3Q_67 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M3Q_670 PF00330 Aconitase family (aconitate hydratase) M3Q_671 PF00694 Aconitase C-terminal domain M3Q_673 PF00180 Isocitrate/isopropylmalate dehydrogenase M3Q_675 PF07007 Protein of unknown function (DUF1311) M3Q_676 PF01176 Translation initiation factor 1A / IF-1 M3Q_678 PF01416 tRNA pseudouridine synthase M3Q_679 PF00710 Asparaginase M3Q_68 PF00091 Tubulin/FtsZ family, GTPase domain M3Q_68 PF12327 FtsZ family, C-terminal domain M3Q_682 PF01118 Semialdehyde dehydrogenase, NAD binding domain M3Q_682 PF02774 Semialdehyde dehydrogenase, dimerisation domain M3Q_683 PF03372 Endonuclease/Exonuclease/phosphatase family M3Q_684 PF00375 Sodium:dicarboxylate symporter family M3Q_685 PF00534 Glycosyl transferases group 1 M3Q_685 PF13439 Glycosyltransferase Family 4 M3Q_686 PF03279 M3Q_686 M3Q_687 PF01810 M3Q_687 M3Q_688 PF00005 ABC transporter M3Q_688 PF12848 ABC transporter M3Q_688 PF16326 M3Q_688 M3Q_689 PF04102 SlyX M3Q_69 PF02491 SHS2 domain inserted in FTSA M3Q_69 PF14450 Cell division protein FtsA M3Q_690 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_690 PF13602 Zinc-binding dehydrogenase M3Q_691 PF01638 HxlR-like helix-turn-helix M3Q_693 PF01131 DNA topoisomerase M3Q_693 PF01396 M3Q_693 M3Q_693 PF01751 Toprim domain M3Q_693 PF08272 Topoisomerase I zinc-ribbon-like M3Q_695 PF03729 M3Q_695 M3Q_696 PF00580 UvrD/REP helicase N-terminal domain M3Q_696 PF13361 UvrD-like helicase C-terminal domain M3Q_697 PF00076 RNA recognition motif M3Q_7 PF04828 Glutathione-dependent formaldehyde-activating enzyme M3Q_70 PF03799 Cell division protein FtsQ M3Q_70 PF08478 POTRA domain, FtsQ-type M3Q_701 PF00999 Sodium/hydrogen exchanger family M3Q_701 PF02254 TrkA-N domain M3Q_702 PF00471 Ribosomal protein L33 M3Q_703 PF00830 Ribosomal L28 family M3Q_704 PF00171 Aldehyde dehydrogenase family M3Q_705 PF00440 Bacterial regulatory proteins, tetR family M3Q_705 PF13972 Bacterial transcriptional repressor M3Q_706 PF00551 Formyl transferase M3Q_706 PF01842 ACT domain M3Q_707 PF03544 Gram-negative bacterial TonB protein C-terminal M3Q_708 PF01618 M3Q_708 M3Q_709 PF02472 Biopolymer transport protein ExbD/TolR M3Q_71 PF07478 D-ala D-ala ligase C-terminus M3Q_710 PF01625 Peptide methionine sulfoxide reductase M3Q_711 PF13387 M3Q_711 M3Q_712 PF00186 Dihydrofolate reductase M3Q_713 PF00303 Thymidylate synthase M3Q_716 PF01790 M3Q_716 M3Q_717 PF05742 M3Q_717 M3Q_718 PF05787 Bacterial protein of unknown function (DUF839) M3Q_719 PF05787 Bacterial protein of unknown function (DUF839) M3Q_72 PF01225 Mur ligase family, catalytic domain M3Q_72 PF02875 Mur ligase family, glutamate ligase domain M3Q_72 PF08245 Mur ligase middle domain M3Q_720 PF00902 Sec-independent protein translocase protein (TatC) M3Q_721 PF02416 mttA/Hcf106 family M3Q_722 PF02416 mttA/Hcf106 family M3Q_724 PF01725 Ham1 family M3Q_725 PF08238 Sel1 repeat M3Q_726 PF07021 Methionine biosynthesis protein MetW M3Q_727 PF00561 alpha/beta hydrolase fold M3Q_728 PF00682 HMGL-like M3Q_728 PF08502 LeuA allosteric (dimerisation) domain M3Q_729 PF13640 2OG-Fe(II) oxygenase superfamily M3Q_73 PF03033 Glycosyltransferase family 28 N-terminal domain M3Q_73 PF04101 Glycosyltransferase family 28 C-terminal domain M3Q_730 PF00593 TonB dependent receptor M3Q_730 PF07715 TonB-dependent Receptor Plug Domain M3Q_731 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M3Q_731 PF05697 Bacterial trigger factor protein (TF) M3Q_731 PF05698 Bacterial trigger factor protein (TF) C-terminus M3Q_732 PF00574 Clp protease M3Q_733 PF06689 ClpX C4-type zinc finger M3Q_733 PF07724 AAA domain (Cdc48 subfamily) M3Q_733 PF10431 C-terminal, D2-small domain, of ClpB protein M3Q_734 PF11008 M3Q_734 M3Q_735 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) M3Q_736 PF05681 M3Q_736 M3Q_736 PF05683 Fumarase C-terminus M3Q_737 PF01515 Phosphate acetyl/butaryl transferase M3Q_737 PF07085 DRTGG domain M3Q_737 PF13500 AAA domain M3Q_738 PF00871 Acetokinase family M3Q_739 PF00920 Dehydratase family M3Q_74 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M3Q_74 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M3Q_740 PF01081 KDPG and KHG aldolase M3Q_741 PF02447 M3Q_741 M3Q_742 PF01202 Shikimate kinase M3Q_743 PF00171 Aldehyde dehydrogenase family M3Q_744 PF00171 Aldehyde dehydrogenase family M3Q_745 PF00561 alpha/beta hydrolase fold M3Q_746 PF04072 Leucine carboxyl methyltransferase M3Q_747 PF00933 Glycosyl hydrolase family 3 N terminal domain M3Q_748 PF00595 PDZ domain (Also known as DHR or GLGF) M3Q_748 PF03572 Peptidase family S41 M3Q_748 PF11818 M3Q_748 M3Q_749 PF00534 Glycosyl transferases group 1 M3Q_749 PF13439 Glycosyltransferase Family 4 M3Q_75 PF08410 M3Q_75 M3Q_750 PF01569 PAP2 superfamily M3Q_751 PF04384 Iron-sulphur cluster assembly M3Q_752 PF00334 Nucleoside diphosphate kinase M3Q_753 PF04055 Radical SAM superfamily M3Q_754 PF13432 Tetratricopeptide repeat M3Q_755 PF13413 Helix-turn-helix domain M3Q_755 PF13464 M3Q_755 M3Q_756 PF04551 GcpE protein M3Q_757 PF03129 Anticodon binding domain M3Q_757 PF13393 Histidyl-tRNA synthetase M3Q_758 PF09976 Tetratricopeptide repeat M3Q_759 PF13360 PQQ-like domain M3Q_76 PF00593 TonB dependent receptor M3Q_76 PF07715 TonB-dependent Receptor Plug Domain M3Q_760 PF01926 50S ribosome-binding GTPase M3Q_760 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M3Q_761 PF13723 M3Q_761 M3Q_762 PF01553 Acyltransferase M3Q_763 PF00550 Phosphopantetheine attachment site M3Q_764 PF00550 Phosphopantetheine attachment site M3Q_765 PF04279 M3Q_765 M3Q_766 PF00501 AMP-binding enzyme M3Q_766 PF13193 AMP-binding enzyme C-terminal domain M3Q_767 PF00535 Glycosyl transferase family 2 M3Q_768 PF03279 M3Q_768 M3Q_769 PF00221 Aromatic amino acid lyase M3Q_77 PF00593 TonB dependent receptor M3Q_770 PF13279 Thioesterase-like superfamily M3Q_771 PF03548 Outer membrane lipoprotein carrier protein LolA M3Q_773 PF01494 FAD binding domain M3Q_774 PF11659 M3Q_774 M3Q_775 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_775 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_777 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_778 PF00109 Beta-ketoacyl synthase, N-terminal domain M3Q_778 PF02801 Beta-ketoacyl synthase, C-terminal domain M3Q_780 PF01648 4'-phosphopantetheinyl transferase superfamily M3Q_781 PF02556 Preprotein translocase subunit SecB M3Q_782 PF00462 Glutaredoxin M3Q_783 PF00581 Rhodanese-like domain M3Q_784 PF03193 Protein of unknown function, DUF258 M3Q_785 PF00929 Exonuclease M3Q_786 PF12811 M3Q_786 M3Q_787 PF13561 Enoyl-(Acyl carrier protein) reductase M3Q_788 PF02321 Outer membrane efflux protein M3Q_789 PF00005 ABC transporter M3Q_789 PF02687 M3Q_789 M3Q_789 PF12704 MacB-like periplasmic core domain M3Q_790 PF16576 M3Q_790 M3Q_791 PF06144 DNA polymerase III, delta subunit M3Q_793 PF00133 tRNA synthetases class I (I, L, M and V) M3Q_793 PF08264 Anticodon-binding domain of tRNA M3Q_793 PF09334 tRNA synthetases class I (M) M3Q_793 PF13603 Leucyl-tRNA synthetase, Domain 2 M3Q_794 PF13511 M3Q_794 M3Q_795 PF00205 Thiamine pyrophosphate enzyme, central domain M3Q_795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M3Q_795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M3Q_796 PF10369 Small subunit of acetolactate synthase M3Q_796 PF13710 ACT domain M3Q_797 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M3Q_797 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain M3Q_798 PF00563 EAL domain M3Q_798 PF00990 GGDEF domain M3Q_799 PF00440 Bacterial regulatory proteins, tetR family M3Q_8 PF13489 Methyltransferase domain M3Q_80 PF00156 Phosphoribosyl transferase domain M3Q_800 PF00440 Bacterial regulatory proteins, tetR family M3Q_802 PF00009 Elongation factor Tu GTP binding domain M3Q_802 PF16658 M3Q_802 M3Q_804 PF11738 Protein of unknown function (DUF3298) M3Q_805 PF01026 TatD related DNase M3Q_806 PF00330 Aconitase family (aconitate hydratase) M3Q_806 PF00694 Aconitase C-terminal domain M3Q_807 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease M3Q_808 PF00899 ThiF family M3Q_809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_809 PF03466 LysR substrate binding domain M3Q_81 PF03372 Endonuclease/Exonuclease/phosphatase family M3Q_811 PF01207 Dihydrouridine synthase (Dus) M3Q_812 PF07690 Major Facilitator Superfamily M3Q_813 PF01042 Endoribonuclease L-PSP M3Q_814 PF00892 EamA-like transporter family M3Q_815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M3Q_815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M3Q_816 PF12769 Domain of unknown function (DUF3814) M3Q_817 PF02233 NAD(P) transhydrogenase beta subunit M3Q_819 PF02410 Oligomerisation domain M3Q_82 PF03960 ArsC family M3Q_820 PF01261 Xylose isomerase-like TIM barrel M3Q_821 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M3Q_821 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M3Q_822 PF00378 Enoyl-CoA hydratase/isomerase family M3Q_823 PF00072 Response regulator receiver domain M3Q_823 PF00512 His Kinase A (phospho-acceptor) domain M3Q_823 PF01627 Hpt domain M3Q_823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_824 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_825 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB M3Q_826 PF05958 tRNA (Uracil-5-)-methyltransferase M3Q_827 PF02824 TGS domain M3Q_827 PF04607 Region found in RelA / SpoT proteins M3Q_827 PF13291 ACT domain M3Q_827 PF13328 HD domain M3Q_828 PF00106 short chain dehydrogenase M3Q_829 PF03819 MazG nucleotide pyrophosphohydrolase domain M3Q_83 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) M3Q_830 PF12836 Helix-hairpin-helix motif M3Q_831 PF01743 Poly A polymerase head domain M3Q_831 PF12626 Polymerase A arginine-rich C-terminus M3Q_831 PF12627 Probable RNA and SrmB- binding site of polymerase A M3Q_832 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M3Q_833 PF02548 Ketopantoate hydroxymethyltransferase M3Q_834 PF02569 Pantoate-beta-alanine ligase M3Q_835 PF03668 M3Q_835 M3Q_836 PF00381 PTS HPr component phosphorylation site M3Q_837 PF04751 Protein of unknown function (DUF615) M3Q_838 PF00501 AMP-binding enzyme M3Q_838 PF13193 AMP-binding enzyme C-terminal domain M3Q_839 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M3Q_839 PF02824 TGS domain M3Q_839 PF03129 Anticodon binding domain M3Q_839 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M3Q_84 PF07859 alpha/beta hydrolase fold M3Q_840 PF00707 Translation initiation factor IF-3, C-terminal domain M3Q_841 PF00043 Glutathione S-transferase, C-terminal domain M3Q_841 PF02798 Glutathione S-transferase, N-terminal domain M3Q_842 PF09335 M3Q_842 M3Q_843 PF05977 Transmembrane secretion effector M3Q_844 PF01632 Ribosomal protein L35 M3Q_845 PF00453 Ribosomal protein L20 M3Q_846 PF08719 Domain of unknown function (DUF1768) M3Q_847 PF00583 Acetyltransferase (GNAT) family M3Q_849 PF01409 tRNA synthetases class II core domain (F) M3Q_849 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M3Q_85 PF00990 GGDEF domain M3Q_850 PF01588 Putative tRNA binding domain M3Q_850 PF03147 Ferredoxin-fold anticodon binding domain M3Q_850 PF03483 B3/4 domain M3Q_850 PF03484 tRNA synthetase B5 domain M3Q_851 PF00216 Bacterial DNA-binding protein M3Q_853 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M3Q_853 PF07497 Rho termination factor, RNA-binding domain M3Q_853 PF07498 Rho termination factor, N-terminal domain M3Q_854 PF00085 Thioredoxin M3Q_855 PF01966 HD domain M3Q_855 PF02541 Ppx/GppA phosphatase family M3Q_856 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M3Q_857 PF01171 PP-loop family M3Q_857 PF09179 TilS substrate binding domain M3Q_857 PF11734 TilS substrate C-terminal domain M3Q_858 PF03807 NADP oxidoreductase coenzyme F420-dependent M3Q_858 PF14748 Pyrroline-5-carboxylate reductase dimerisation M3Q_859 PF02325 M3Q_859 M3Q_86 PF00085 Thioredoxin M3Q_86 PF02683 M3Q_86 M3Q_86 PF11412 Disulphide bond corrector protein DsbC M3Q_860 PF00476 DNA polymerase family A M3Q_860 PF01367 5'-3' exonuclease, C-terminal SAM fold M3Q_860 PF01612 3'-5' exonuclease M3Q_860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M3Q_861 PF10101 M3Q_861 M3Q_862 PF00924 Mechanosensitive ion channel M3Q_864 PF00437 Type II/IV secretion system protein M3Q_865 PF02566 OsmC-like protein M3Q_866 PF01047 MarR family M3Q_867 PF16309 M3Q_867 M3Q_868 PF00795 Carbon-nitrogen hydrolase M3Q_869 PF01740 STAS domain M3Q_87 PF13557 M3Q_87 M3Q_870 PF07228 Stage II sporulation protein E (SpoIIE) M3Q_871 PF04333 M3Q_871 M3Q_872 PF00309 M3Q_872 M3Q_872 PF04552 Sigma-54, DNA binding domain M3Q_872 PF04963 Sigma-54 factor, core binding domain M3Q_873 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M3Q_874 PF01722 BolA-like protein M3Q_875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M3Q_876 PF01634 ATP phosphoribosyltransferase M3Q_877 PF00815 Histidinol dehydrogenase M3Q_878 PF00155 Aminotransferase class I and II M3Q_879 PF00425 chorismate binding enzyme M3Q_879 PF04715 Anthranilate synthase component I, N terminal region M3Q_881 PF03412 Peptidase C39 family M3Q_883 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M3Q_886 PF00293 NUDIX domain M3Q_886 PF14803 Nudix N-terminal M3Q_887 PF00293 NUDIX domain M3Q_888 PF00132 Bacterial transferase hexapeptide (six repeats) M3Q_889 PF00814 Glycoprotease family M3Q_89 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M3Q_890 PF04445 Putative SAM-dependent methyltransferase M3Q_891 PF01650 Peptidase C13 family M3Q_892 PF00756 Putative esterase M3Q_893 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) M3Q_894 PF00834 Ribulose-phosphate 3 epimerase family M3Q_895 PF08282 haloacid dehalogenase-like hydrolase M3Q_897 PF00394 Multicopper oxidase M3Q_897 PF07731 Multicopper oxidase M3Q_897 PF07732 Multicopper oxidase M3Q_898 PF05275 M3Q_898 M3Q_899 PF01545 Cation efflux family M3Q_9 PF01593 Flavin containing amine oxidoreductase M3Q_90 PF01522 Polysaccharide deacetylase M3Q_900 PF00893 Small Multidrug Resistance protein M3Q_901 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M3Q_901 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M3Q_902 PF01960 ArgJ family M3Q_903 PF02445 Quinolinate synthetase A protein M3Q_904 PF00962 Adenosine/AMP deaminase M3Q_905 PF00107 Zinc-binding dehydrogenase M3Q_905 PF08240 Alcohol dehydrogenase GroES-like domain M3Q_906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_906 PF03466 LysR substrate binding domain M3Q_907 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M3Q_907 PF02770 Acyl-CoA dehydrogenase, middle domain M3Q_907 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M3Q_908 PF07690 Major Facilitator Superfamily M3Q_909 PF02515 CoA-transferase family III M3Q_911 PF00890 FAD binding domain M3Q_912 PF03466 LysR substrate binding domain M3Q_913 PF13531 Bacterial extracellular solute-binding protein M3Q_914 PF07690 Major Facilitator Superfamily M3Q_915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_915 PF03466 LysR substrate binding domain M3Q_917 PF01546 Peptidase family M20/M25/M40 M3Q_917 PF07687 Peptidase dimerisation domain M3Q_918 PF12625 M3Q_918 M3Q_918 PF12833 Helix-turn-helix domain M3Q_92 PF00576 HIUase/Transthyretin family M3Q_920 PF01810 M3Q_920 M3Q_921 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_921 PF03466 LysR substrate binding domain M3Q_922 PF08908 M3Q_922 M3Q_923 PF01717 Cobalamin-independent synthase, Catalytic domain M3Q_924 PF01613 Flavin reductase like domain M3Q_925 PF00440 Bacterial regulatory proteins, tetR family M3Q_926 PF04471 Restriction endonuclease M3Q_926 PF13401 AAA domain M3Q_928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_928 PF03466 LysR substrate binding domain M3Q_929 PF02567 Phenazine biosynthesis-like protein M3Q_93 PF00860 Permease family M3Q_933 PF01011 PQQ enzyme repeat M3Q_933 PF13360 PQQ-like domain M3Q_938 PF06527 M3Q_938 M3Q_939 PF05621 M3Q_939 M3Q_94 PF03502 Nucleoside-specific channel-forming protein, Tsx M3Q_940 PF00665 Integrase core domain M3Q_940 PF09299 Mu transposase, C-terminal M3Q_941 PF08722 TnsA endonuclease N terminal M3Q_943 PF13182 M3Q_943 M3Q_945 PF01507 Phosphoadenosine phosphosulfate reductase family M3Q_947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_947 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_948 PF00268 Ribonucleotide reductase, small chain M3Q_95 PF01494 FAD binding domain M3Q_950 PF00317 Ribonucleotide reductase, all-alpha domain M3Q_950 PF02867 Ribonucleotide reductase, barrel domain M3Q_950 PF03477 ATP cone domain M3Q_951 PF00072 Response regulator receiver domain M3Q_951 PF00486 Transcriptional regulatory protein, C terminal M3Q_952 PF00512 His Kinase A (phospho-acceptor) domain M3Q_952 PF00672 HAMP domain M3Q_952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_954 PF00990 GGDEF domain M3Q_955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M3Q_956 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M3Q_957 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M3Q_957 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M3Q_958 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin M3Q_959 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M3Q_959 PF10531 SLBB domain M3Q_959 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M3Q_96 PF03561 Allantoicase repeat M3Q_960 PF00384 Molybdopterin oxidoreductase M3Q_960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M3Q_960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M3Q_960 PF13510 2Fe-2S iron-sulfur cluster binding domain M3Q_961 PF00146 NADH dehydrogenase M3Q_962 PF12838 4Fe-4S dicluster domain M3Q_963 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M3Q_964 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M3Q_965 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M3Q_965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M3Q_966 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M3Q_967 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M3Q_968 PF14681 Uracil phosphoribosyltransferase M3Q_969 PF00313 'Cold-shock' DNA-binding domain M3Q_97 PF04115 Ureidoglycolate hydrolase M3Q_970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M3Q_970 PF03466 LysR substrate binding domain M3Q_971 PF00175 Oxidoreductase NAD-binding domain M3Q_971 PF00970 Oxidoreductase FAD-binding domain M3Q_974 PF05552 Conserved TM helix M3Q_976 PF03486 HI0933-like protein M3Q_977 PF00291 Pyridoxal-phosphate dependent enzyme M3Q_978 PF13437 HlyD family secretion protein M3Q_978 PF13533 Biotin-lipoyl like M3Q_979 PF07690 Major Facilitator Superfamily M3Q_98 PF00106 short chain dehydrogenase M3Q_980 PF00440 Bacterial regulatory proteins, tetR family M3Q_981 PF01810 M3Q_981 M3Q_983 PF01588 Putative tRNA binding domain M3Q_983 PF08264 Anticodon-binding domain of tRNA M3Q_983 PF09334 tRNA synthetases class I (M) M3Q_985 PF10609 ParA/MinD ATPase like M3Q_986 PF01048 Phosphorylase superfamily M3Q_987 PF09835 M3Q_987 M3Q_988 PF01810 M3Q_988 M3Q_989 PF00692 dUTPase M3Q_99 PF00204 DNA gyrase B M3Q_99 PF00986 DNA gyrase B subunit, carboxyl terminus M3Q_99 PF01751 Toprim domain M3Q_99 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M3Q_995 PF01207 Dihydrouridine synthase (Dus) M3Q_996 PF01578 M3Q_996 M3Q_997 PF00448 SRP54-type protein, GTPase domain M3Q_997 PF02881 SRP54-type protein, helical bundle domain M3Q_997 PF02978 Signal peptide binding domain M3Q_998 PF03309 Type III pantothenate kinase M3Q_999 PF03099 Biotin/lipoate A/B protein ligase family