M3Q_1001 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1003 SM00771 ZipA, C-terminal domain (FtsZ-binding) M3Q_1004 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M3Q_1004 SM00292 breast cancer carboxy-terminal domain M3Q_1004 SM00532 Ligase N family M3Q_1014 SM00363 S4 RNA-binding domain M3Q_1021 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M3Q_1022 SM00822 M3Q_1022 M3Q_1024 SM00257 Lysin motif M3Q_1033 SM01400 M3Q_1033 M3Q_1036 SM00028 Tetratricopeptide repeats M3Q_1038 SM00400 zinc finger M3Q_1038 SM00493 M3Q_1038 M3Q_1040 SM00363 S4 RNA-binding domain M3Q_1048 SM01329 M3Q_1048 M3Q_1059 SM00825 Beta-ketoacyl synthase M3Q_1063 SM00838 Elongation factor G C-terminus M3Q_1063 SM00889 Elongation factor G, domain IV M3Q_1071 SM00843 M3Q_1071 M3Q_1079 SM00563 Phosphate acyltransferases M3Q_1093 SM00382 ATPases associated with a variety of cellular activities M3Q_110 SM00257 Lysin motif M3Q_1102 SM01004 Delta-aminolevulinic acid dehydratase M3Q_1110 SM00901 M3Q_1110 M3Q_1119 SM00479 M3Q_1119 M3Q_1126 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1137 SM00382 ATPases associated with a variety of cellular activities M3Q_1141 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1187 SM00487 DEAD-like helicases superfamily M3Q_1200 SM00382 ATPases associated with a variety of cellular activities M3Q_1208 SM01130 M3Q_1208 M3Q_1212 SM00965 Secretin and TonB N terminus short domain M3Q_122 SM00448 cheY-homologous receiver domain M3Q_122 SM00862 Transcriptional regulatory protein, C terminal M3Q_123 SM00387 Histidine kinase-like ATPases M3Q_123 SM00388 His Kinase A (phosphoacceptor) domain M3Q_1235 SM01322 M3Q_1235 M3Q_1243 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_1247 SM00822 M3Q_1247 M3Q_126 SM00450 Rhodanese Homology Domain M3Q_1261 SM00342 helix_turn_helix, arabinose operon control protein M3Q_1266 SM00822 M3Q_1266 M3Q_1269 SM00861 Transketolase, pyrimidine binding domain M3Q_1270 SM01018 B12 binding domain M3Q_1282 SM00947 Carbonic anhydrase M3Q_1284 SM00382 ATPases associated with a variety of cellular activities M3Q_1304 SM01091 Transporter associated domain M3Q_1313 SM00988 UreE urease accessory protein, N-terminal domain M3Q_1322 SM00478 endonuclease III M3Q_1324 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3Q_1328 SM00382 ATPases associated with a variety of cellular activities M3Q_1328 SM00464 Found in ATP-dependent protease La (LON) M3Q_1349 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1381 SM00287 Bacterial SH3 domain homologues M3Q_1387 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1410 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1461 SM01011 Aminopeptidase P, N-terminal domain M3Q_1465 SM00422 helix_turn_helix, mercury resistance M3Q_1476 SM00479 M3Q_1476 M3Q_1477 SM00257 Lysin motif M3Q_1481 SM00382 ATPases associated with a variety of cellular activities M3Q_1484 SM00479 M3Q_1484 M3Q_1486 SM00267 diguanylate cyclase M3Q_149 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_149 SM00866 M3Q_149 M3Q_1496 SM00671 Sel1-like repeats. M3Q_1497 SM00671 Sel1-like repeats. M3Q_1498 SM00671 Sel1-like repeats. M3Q_15 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1507 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1507 SM00895 M3Q_1507 M3Q_151 SM00833 Cobalamin synthesis protein cobW C-terminal domain M3Q_1510 SM00344 helix_turn_helix ASNC type M3Q_1516 SM00857 Resolvase, N terminal domain M3Q_1531 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M3Q_1532 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3Q_1534 SM00788 Adenylosuccinate synthetase M3Q_1540 SM00100 Cyclic nucleotide-monophosphate binding domain M3Q_1540 SM00419 helix_turn_helix, cAMP Regulatory protein M3Q_1544 SM00382 ATPases associated with a variety of cellular activities M3Q_1544 SM01086 C-terminal, D2-small domain, of ClpB protein M3Q_1547 SM00981 M3Q_1547 M3Q_1563 SM00382 ATPases associated with a variety of cellular activities M3Q_1563 SM00487 DEAD-like helicases superfamily M3Q_1563 SM00490 helicase superfamily c-terminal domain M3Q_1563 SM00847 Helicase associated domain (HA2) Add an annotation M3Q_157 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_1575 SM00422 helix_turn_helix, mercury resistance M3Q_1584 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1589 SM00357 Cold shock protein domain M3Q_1602 SM00840 M3Q_1602 M3Q_1603 SM00116 Domain in cystathionine beta-synthase and other proteins. M3Q_1607 SM00382 ATPases associated with a variety of cellular activities M3Q_1609 SM00382 ATPases associated with a variety of cellular activities M3Q_1618 SM00533 DNA-binding domain of DNA mismatch repair MUTS family M3Q_1618 SM00534 ATPase domain of DNA mismatch repair MUTS family M3Q_1619 SM00344 helix_turn_helix ASNC type M3Q_1621 SM00052 Putative diguanylate phosphodiesterase M3Q_1626 SM00422 helix_turn_helix, mercury resistance M3Q_163 SM01130 M3Q_163 M3Q_1641 SM00796 Allophanate hydrolase subunit 1 M3Q_1641 SM00797 Allophanate hydrolase subunit 2 M3Q_1642 SM00878 Biotin carboxylase C-terminal domain M3Q_1644 SM00671 Sel1-like repeats. M3Q_1650 SM00829 Enoylreductase M3Q_1653 SM00796 Allophanate hydrolase subunit 1 M3Q_1653 SM00797 Allophanate hydrolase subunit 2 M3Q_1653 SM00878 Biotin carboxylase C-terminal domain M3Q_1661 SM00382 ATPases associated with a variety of cellular activities M3Q_1676 SM00382 ATPases associated with a variety of cellular activities M3Q_1676 SM01086 C-terminal, D2-small domain, of ClpB protein M3Q_168 SM00382 ATPases associated with a variety of cellular activities M3Q_1683 SM00248 ankyrin repeats M3Q_17 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1716 SM01060 M3Q_1716 M3Q_1719 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1719 SM00895 M3Q_1719 M3Q_1722 SM00903 Flavin reductase like domain M3Q_1731 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_1733 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1733 SM00866 M3Q_1733 M3Q_1735 SM00382 ATPases associated with a variety of cellular activities M3Q_174 SM00478 endonuclease III M3Q_174 SM00525 M3Q_174 M3Q_1743 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_1747 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_1754 SM00882 Coenzyme A transferase M3Q_1755 SM00882 Coenzyme A transferase M3Q_1764 SM00878 Biotin carboxylase C-terminal domain M3Q_178 SM00829 Enoylreductase M3Q_1782 SM01236 M3Q_1782 M3Q_1783 SM01060 M3Q_1783 M3Q_1786 SM00384 DNA binding domain with preference for A/T rich regions M3Q_1789 SM00344 helix_turn_helix ASNC type M3Q_179 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1791 SM00387 Histidine kinase-like ATPases M3Q_1791 SM00388 His Kinase A (phosphoacceptor) domain M3Q_1791 SM00448 cheY-homologous receiver domain M3Q_1792 SM00421 helix_turn_helix, Lux Regulon M3Q_1792 SM00448 cheY-homologous receiver domain M3Q_1796 SM00382 ATPases associated with a variety of cellular activities M3Q_1797 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_1798 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_1804 SM00450 Rhodanese Homology Domain M3Q_1805 SM00822 M3Q_1805 M3Q_1812 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1822 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. M3Q_1826 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_1836 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_1837 SM00382 ATPases associated with a variety of cellular activities M3Q_1844 SM00823 Phosphopantetheine attachment site M3Q_1844 SM01294 M3Q_1844 M3Q_1846 SM00823 Phosphopantetheine attachment site M3Q_1846 SM00824 Thioesterase M3Q_1852 SM00481 DNA polymerase alpha chain like domain M3Q_1853 SM00870 M3Q_1853 M3Q_1858 SM00342 helix_turn_helix, arabinose operon control protein M3Q_1861 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M3Q_1868 SM00100 Cyclic nucleotide-monophosphate binding domain M3Q_1868 SM00419 helix_turn_helix, cAMP Regulatory protein M3Q_187 SM00271 DnaJ molecular chaperone homology domain M3Q_1872 SM00382 ATPases associated with a variety of cellular activities M3Q_1872 SM00930 M3Q_1872 M3Q_1881 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_1884 SM00382 ATPases associated with a variety of cellular activities M3Q_1886 SM00344 helix_turn_helix ASNC type M3Q_1888 SM00563 Phosphate acyltransferases M3Q_1890 SM01236 M3Q_1890 M3Q_1906 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_1906 SM00876 Biotin and Thiamin Synthesis associated domain M3Q_1910 SM00530 Helix-turn-helix XRE-family like proteins M3Q_1917 SM00861 Transketolase, pyrimidine binding domain M3Q_1919 SM00867 YceI-like domain M3Q_1926 SM00344 helix_turn_helix ASNC type M3Q_1930 SM00342 helix_turn_helix, arabinose operon control protein M3Q_1932 SM00382 ATPases associated with a variety of cellular activities M3Q_1937 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M3Q_1939 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. M3Q_1951 SM00470 ParB-like nuclease domain M3Q_1954 SM00382 ATPases associated with a variety of cellular activities M3Q_1966 SM00986 Uracil DNA glycosylase superfamily M3Q_1966 SM00987 UreE urease accessory protein, C-terminal domain M3Q_1971 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_1972 SM00411 bacterial (prokaryotic) histone like domain M3Q_1974 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family M3Q_1977 SM00342 helix_turn_helix, arabinose operon control protein M3Q_1992 SM00382 ATPases associated with a variety of cellular activities M3Q_2003 SM00487 DEAD-like helicases superfamily M3Q_2003 SM00490 helicase superfamily c-terminal domain M3Q_2003 SM00982 M3Q_2003 M3Q_2003 SM01058 CarD-like/TRCF domain M3Q_2005 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain M3Q_2008 SM00271 DnaJ molecular chaperone homology domain M3Q_2015 SM00411 bacterial (prokaryotic) histone like domain M3Q_2017 SM00342 helix_turn_helix, arabinose operon control protein M3Q_202 SM00849 Metallo-beta-lactamase superfamily M3Q_2035 SM01006 Siderophore biosynthesis protein domain M3Q_2040 SM00855 Phosphoglycerate mutase family M3Q_2052 SM00382 ATPases associated with a variety of cellular activities M3Q_206 SM00235 Zinc-dependent metalloprotease M3Q_2060 SM01324 M3Q_2060 M3Q_207 SM00235 Zinc-dependent metalloprotease M3Q_2070 SM00493 M3Q_2070 M3Q_2071 SM00341 Helicase and RNase D C-terminal M3Q_2071 SM00474 3'-5' exonuclease M3Q_2077 SM00382 ATPases associated with a variety of cellular activities M3Q_2082 SM00267 diguanylate cyclase M3Q_2085 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_2087 SM00861 Transketolase, pyrimidine binding domain M3Q_2091 SM00829 Enoylreductase M3Q_2093 SM00382 ATPases associated with a variety of cellular activities M3Q_2094 SM00849 Metallo-beta-lactamase superfamily M3Q_2099 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2103 SM00866 M3Q_2103 M3Q_2108 SM00382 ATPases associated with a variety of cellular activities M3Q_2109 SM00567 E-Z type HEAT repeats M3Q_211 SM01001 AIR carboxylase M3Q_2120 SM00882 Coenzyme A transferase M3Q_2121 SM00882 Coenzyme A transferase M3Q_2128 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2133 SM00903 Flavin reductase like domain M3Q_2135 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2142 SM00382 ATPases associated with a variety of cellular activities M3Q_215 SM00014 Acid phosphatase homologues M3Q_2151 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_2156 SM00155 Phospholipase D. Active site motifs. M3Q_2161 SM00829 Enoylreductase M3Q_2181 SM00448 cheY-homologous receiver domain M3Q_2181 SM00862 Transcriptional regulatory protein, C terminal M3Q_2182 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M3Q_2182 SM00387 Histidine kinase-like ATPases M3Q_2182 SM00388 His Kinase A (phosphoacceptor) domain M3Q_2184 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2186 SM00822 M3Q_2186 M3Q_2187 SM00822 M3Q_2187 M3Q_2195 SM00530 Helix-turn-helix XRE-family like proteins M3Q_220 SM00480 DNA polymerase III beta subunit M3Q_2206 SM00421 helix_turn_helix, Lux Regulon M3Q_221 SM00382 ATPases associated with a variety of cellular activities M3Q_221 SM00760 Bacterial dnaA protein helix-turn-helix domain M3Q_2221 SM01400 M3Q_2221 M3Q_2223 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2225 SM00382 ATPases associated with a variety of cellular activities M3Q_2228 SM00829 Enoylreductase M3Q_2231 SM00342 helix_turn_helix, arabinose operon control protein M3Q_224 SM01234 M3Q_224 M3Q_2248 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_2254 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_2254 SM00866 M3Q_2254 M3Q_2260 SM00912 haemagglutination activity domain M3Q_2275 SM00422 helix_turn_helix, mercury resistance M3Q_2279 SM00347 helix_turn_helix multiple antibiotic resistance protein M3Q_2283 SM01060 M3Q_2283 M3Q_2287 SM00829 Enoylreductase M3Q_2291 SM00091 PAS domain M3Q_2291 SM00382 ATPases associated with a variety of cellular activities M3Q_2294 SM00855 Phosphoglycerate mutase family M3Q_2301 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_2301 SM00895 M3Q_2301 M3Q_2304 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M3Q_2307 SM00882 Coenzyme A transferase M3Q_2308 SM00882 Coenzyme A transferase M3Q_2315 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2316 SM00903 Flavin reductase like domain M3Q_2325 SM00347 helix_turn_helix multiple antibiotic resistance protein M3Q_2329 SM00855 Phosphoglycerate mutase family M3Q_2333 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_2334 SM00849 Metallo-beta-lactamase superfamily M3Q_2338 SM00564 beta-propeller repeat M3Q_2340 SM00710 Parallel beta-helix repeats M3Q_2347 SM00998 Adenylosuccinate lyase C-terminus M3Q_2349 SM00882 Coenzyme A transferase M3Q_2350 SM00882 Coenzyme A transferase M3Q_2354 SM01192 M3Q_2354 M3Q_2354 SM01193 M3Q_2354 M3Q_2367 SM00382 ATPases associated with a variety of cellular activities M3Q_2367 SM01086 C-terminal, D2-small domain, of ClpB protein M3Q_237 SM00387 Histidine kinase-like ATPases M3Q_237 SM00433 TopoisomeraseII M3Q_2370 SM00859 Semialdehyde dehydrogenase, NAD binding domain M3Q_2378 SM01264 M3Q_2378 M3Q_2391 SM00382 ATPases associated with a variety of cellular activities M3Q_2391 SM00962 SRP54-type protein, GTPase domain M3Q_2391 SM00963 SRP54-type protein, helical bundle domain M3Q_2396 SM00116 Domain in cystathionine beta-synthase and other proteins. M3Q_240 SM00382 ATPases associated with a variety of cellular activities M3Q_2413 SM00347 helix_turn_helix multiple antibiotic resistance protein M3Q_2415 SM00052 Putative diguanylate phosphodiesterase M3Q_2415 SM00091 PAS domain M3Q_2415 SM00267 diguanylate cyclase M3Q_2424 SM00344 helix_turn_helix ASNC type M3Q_2430 SM00363 S4 RNA-binding domain M3Q_2431 SM00382 ATPases associated with a variety of cellular activities M3Q_2437 SM00935 Outer membrane protein (OmpH-like) M3Q_2439 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M3Q_2445 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_2446 SM00091 PAS domain M3Q_2446 SM00387 Histidine kinase-like ATPases M3Q_2446 SM00388 His Kinase A (phosphoacceptor) domain M3Q_2447 SM00382 ATPases associated with a variety of cellular activities M3Q_2447 SM00448 cheY-homologous receiver domain M3Q_2464 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_2466 SM00852 Probable molybdopterin binding domain M3Q_2467 SM00852 Probable molybdopterin binding domain M3Q_2470 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_2471 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M3Q_2473 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M3Q_2478 SM00448 cheY-homologous receiver domain M3Q_2478 SM01012 M3Q_2478 M3Q_248 SM00248 ankyrin repeats M3Q_2483 SM00878 Biotin carboxylase C-terminal domain M3Q_2486 SM01236 M3Q_2486 M3Q_2493 SM00226 Low molecular weight phosphatase family M3Q_2499 SM00382 ATPases associated with a variety of cellular activities M3Q_2504 SM00822 M3Q_2504 M3Q_2510 SM00344 helix_turn_helix ASNC type M3Q_2513 SM00831 Cation transporter/ATPase, N-terminus M3Q_2519 SM00382 ATPases associated with a variety of cellular activities M3Q_253 SM00904 Riboflavin kinase M3Q_2535 SM00344 helix_turn_helix ASNC type M3Q_2536 SM00830 Chorismate mutase type II M3Q_2544 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2544 SM00871 Bacterial transcription activator, effector binding domain M3Q_2546 SM00382 ATPases associated with a variety of cellular activities M3Q_2549 SM00862 Transcriptional regulatory protein, C terminal M3Q_2563 SM00853 MutL C terminal dimerisation domain M3Q_2563 SM01340 M3Q_2563 M3Q_2568 SM00363 S4 RNA-binding domain M3Q_257 SM00382 ATPases associated with a variety of cellular activities M3Q_2584 SM01230 M3Q_2584 M3Q_2585 SM00448 cheY-homologous receiver domain M3Q_2585 SM00862 Transcriptional regulatory protein, C terminal M3Q_2586 SM00387 Histidine kinase-like ATPases M3Q_2586 SM00388 His Kinase A (phosphoacceptor) domain M3Q_2591 SM00905 Dihydroneopterin aldolase M3Q_2594 SM00903 Flavin reductase like domain M3Q_2597 SM00822 M3Q_2597 M3Q_2598 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2599 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_26 SM00829 Enoylreductase M3Q_260 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_2602 SM00937 M3Q_2602 M3Q_261 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_2625 SM01005 Alanine racemase, C-terminal domain M3Q_2627 SM00460 Transglutaminase/protease-like homologues M3Q_2631 SM01228 M3Q_2631 M3Q_2636 SM00798 AICARFT/IMPCHase bienzyme M3Q_2636 SM00851 MGS-like domain M3Q_2637 SM01209 M3Q_2637 M3Q_2637 SM01210 M3Q_2637 M3Q_2639 SM00382 ATPases associated with a variety of cellular activities M3Q_2639 SM00930 M3Q_2639 M3Q_2641 SM00849 Metallo-beta-lactamase superfamily M3Q_2654 SM00382 ATPases associated with a variety of cellular activities M3Q_2682 SM00972 Spore Coat Protein U domain M3Q_2687 SM00972 Spore Coat Protein U domain M3Q_2690 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_2690 SM00895 M3Q_2690 M3Q_2694 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2697 SM01034 Sensors of blue-light using FAD M3Q_2708 SM00220 Serine/Threonine protein kinases, catalytic domain M3Q_2724 SM00855 Phosphoglycerate mutase family M3Q_2728 SM00487 DEAD-like helicases superfamily M3Q_2728 SM00490 helicase superfamily c-terminal domain M3Q_2729 SM00357 Cold shock protein domain M3Q_2742 SM00830 Chorismate mutase type II M3Q_2753 SM00387 Histidine kinase-like ATPases M3Q_2753 SM00388 His Kinase A (phosphoacceptor) domain M3Q_2754 SM00448 cheY-homologous receiver domain M3Q_2754 SM00862 Transcriptional regulatory protein, C terminal M3Q_2756 SM00382 ATPases associated with a variety of cellular activities M3Q_2761 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_2765 SM00382 ATPases associated with a variety of cellular activities M3Q_2768 SM00062 Bacterial periplasmic substrate-binding proteins M3Q_277 SM00644 M3Q_277 M3Q_2776 SM00479 M3Q_2776 M3Q_2778 SM00382 ATPases associated with a variety of cellular activities M3Q_2788 SM00342 helix_turn_helix, arabinose operon control protein M3Q_2798 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_2802 SM00996 S-adenosyl-L-homocysteine hydrolase M3Q_2802 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M3Q_2805 SM00052 Putative diguanylate phosphodiesterase M3Q_2805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) M3Q_2805 SM00091 PAS domain M3Q_2805 SM00267 diguanylate cyclase M3Q_2806 SM00919 Malic enzyme, NAD binding domain M3Q_2806 SM01274 M3Q_2806 M3Q_2808 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M3Q_2816 SM01230 M3Q_2816 M3Q_282 SM00226 Low molecular weight phosphatase family M3Q_2824 SM00463 Small MutS-related domain M3Q_2826 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M3Q_2827 SM01092 CO dehydrogenase flavoprotein C-terminal domain M3Q_284 SM00984 UDP binding domain M3Q_2840 SM00382 ATPases associated with a variety of cellular activities M3Q_2841 SM00382 ATPases associated with a variety of cellular activities M3Q_2850 SM00382 ATPases associated with a variety of cellular activities M3Q_2865 SM00829 Enoylreductase M3Q_2866 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain M3Q_2893 SM00841 Elongation factor P, C-terminal M3Q_2893 SM01185 M3Q_2893 M3Q_2919 SM00778 Zinc-binding domain of primase-helicase M3Q_2922 SM00530 Helix-turn-helix XRE-family like proteins M3Q_2933 SM00841 Elongation factor P, C-terminal M3Q_2933 SM01185 M3Q_2933 M3Q_2936 SM00052 Putative diguanylate phosphodiesterase M3Q_2943 SM00257 Lysin motif M3Q_2947 SM00936 Penicillin-binding protein 5, C-terminal domain M3Q_2956 SM00382 ATPases associated with a variety of cellular activities M3Q_2962 SM00344 helix_turn_helix ASNC type M3Q_2973 SM00487 DEAD-like helicases superfamily M3Q_2973 SM00490 helicase superfamily c-terminal domain M3Q_2979 SM00880 M3Q_2979 M3Q_2979 SM01118 M3Q_2979 M3Q_2989 SM01329 M3Q_2989 M3Q_299 SM00984 UDP binding domain M3Q_30 SM00267 diguanylate cyclase M3Q_3009 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase M3Q_3013 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M3Q_3016 SM00490 helicase superfamily c-terminal domain M3Q_3018 SM00267 diguanylate cyclase M3Q_3030 SM00358 Double-stranded RNA binding motif M3Q_3030 SM00535 Ribonuclease III family M3Q_3033 SM00838 Elongation factor G C-terminus M3Q_3035 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M3Q_3045 SM00382 ATPases associated with a variety of cellular activities M3Q_305 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_305 SM00895 M3Q_305 M3Q_3060 SM01211 M3Q_3060 M3Q_3061 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M3Q_3062 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M3Q_3063 SM00382 ATPases associated with a variety of cellular activities M3Q_3086 SM00849 Metallo-beta-lactamase superfamily M3Q_3087 SM00382 ATPases associated with a variety of cellular activities M3Q_309 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_309 SM00895 M3Q_309 M3Q_3102 SM00434 DNA Topoisomerase IV M3Q_3103 SM00893 Electron transfer flavoprotein domain M3Q_3104 SM00893 Electron transfer flavoprotein domain M3Q_3111 SM00382 ATPases associated with a variety of cellular activities M3Q_3112 SM00978 M3Q_3112 M3Q_3137 SM00849 Metallo-beta-lactamase superfamily M3Q_3140 SM00883 Chaperonin 10 Kd subunit M3Q_3143 SM00046 Diacylglycerol kinase catalytic domain (presumed) M3Q_3155 SM00382 ATPases associated with a variety of cellular activities M3Q_3157 SM01103 M3Q_3157 M3Q_3160 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain M3Q_3161 SM00851 MGS-like domain M3Q_3161 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M3Q_3167 SM00854 Bacterial capsule synthesis protein PGA_cap M3Q_318 SM00825 Beta-ketoacyl synthase M3Q_3184 SM00881 CoA binding domain M3Q_3188 SM00861 Transketolase, pyrimidine binding domain M3Q_3195 SM00450 Rhodanese Homology Domain M3Q_3216 SM00014 Acid phosphatase homologues M3Q_3223 SM00822 M3Q_3223 M3Q_3232 SM00387 Histidine kinase-like ATPases M3Q_3232 SM00388 His Kinase A (phosphoacceptor) domain M3Q_3233 SM00448 cheY-homologous receiver domain M3Q_3233 SM00862 Transcriptional regulatory protein, C terminal M3Q_3237 SM00563 Phosphate acyltransferases M3Q_3240 SM00244 prohibitin homologues M3Q_3246 SM00829 Enoylreductase M3Q_3247 SM00342 helix_turn_helix, arabinose operon control protein M3Q_3251 SM00342 helix_turn_helix, arabinose operon control protein M3Q_3258 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_3265 SM00845 GatB domain M3Q_328 SM00344 helix_turn_helix ASNC type M3Q_3288 SM00073 Histidine Phosphotransfer domain M3Q_3288 SM00260 Two component signalling adaptor domain M3Q_3288 SM00387 Histidine kinase-like ATPases M3Q_3288 SM00448 cheY-homologous receiver domain M3Q_3288 SM01231 M3Q_3288 M3Q_3289 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). M3Q_3290 SM00260 Two component signalling adaptor domain M3Q_3291 SM00448 cheY-homologous receiver domain M3Q_3292 SM00448 cheY-homologous receiver domain M3Q_330 SM01005 Alanine racemase, C-terminal domain M3Q_3303 SM00671 Sel1-like repeats. M3Q_3311 SM00881 CoA binding domain M3Q_3317 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain M3Q_3317 SM01232 M3Q_3317 M3Q_3321 SM00838 Elongation factor G C-terminus M3Q_3334 SM00564 beta-propeller repeat M3Q_3337 SM00342 helix_turn_helix, arabinose operon control protein M3Q_3348 SM00957 SecA DEAD-like domain M3Q_3348 SM00958 SecA preprotein cross-linking domain M3Q_3350 SM00849 Metallo-beta-lactamase superfamily M3Q_3356 SM00342 helix_turn_helix, arabinose operon control protein M3Q_3368 SM00448 cheY-homologous receiver domain M3Q_3368 SM00862 Transcriptional regulatory protein, C terminal M3Q_3369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M3Q_3369 SM00387 Histidine kinase-like ATPases M3Q_3369 SM00388 His Kinase A (phosphoacceptor) domain M3Q_3394 SM00387 Histidine kinase-like ATPases M3Q_3394 SM00388 His Kinase A (phosphoacceptor) domain M3Q_3399 SM01323 M3Q_3399 M3Q_3405 SM00481 DNA polymerase alpha chain like domain M3Q_3410 SM00450 Rhodanese Homology Domain M3Q_3420 SM00267 diguanylate cyclase M3Q_3423 SM00155 Phospholipase D. Active site motifs. M3Q_3424 SM00563 Phosphate acyltransferases M3Q_3430 SM00650 Ribosomal RNA adenine dimethylases M3Q_3437 SM00878 Biotin carboxylase C-terminal domain M3Q_344 SM00421 helix_turn_helix, Lux Regulon M3Q_3450 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. M3Q_3456 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_3466 SM00342 helix_turn_helix, arabinose operon control protein M3Q_347 SM00823 Phosphopantetheine attachment site M3Q_347 SM01294 M3Q_347 M3Q_3472 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_3472 SM00955 M3Q_3472 M3Q_3485 SM00662 RNA polymerases D M3Q_3486 SM00363 S4 RNA-binding domain M3Q_3486 SM01390 M3Q_3486 M3Q_349 SM00823 Phosphopantetheine attachment site M3Q_349 SM00824 Thioesterase M3Q_3499 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M3Q_3500 SM01374 M3Q_3500 M3Q_3504 SM00322 K homology RNA-binding domain M3Q_3507 SM01382 M3Q_3507 M3Q_3507 SM01383 M3Q_3507 M3Q_3511 SM01403 M3Q_3511 M3Q_3521 SM00563 Phosphate acyltransferases M3Q_3524 SM00487 DEAD-like helicases superfamily M3Q_3524 SM00490 helicase superfamily c-terminal domain M3Q_3533 SM00382 ATPases associated with a variety of cellular activities M3Q_3534 SM00487 DEAD-like helicases superfamily M3Q_3534 SM00490 helicase superfamily c-terminal domain M3Q_3536 SM00861 Transketolase, pyrimidine binding domain M3Q_3544 SM00116 Domain in cystathionine beta-synthase and other proteins. M3Q_3564 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M3Q_36 SM00387 Histidine kinase-like ATPases M3Q_36 SM00388 His Kinase A (phosphoacceptor) domain M3Q_36 SM00448 cheY-homologous receiver domain M3Q_3601 SM00072 Guanylate kinase homologues. M3Q_3602 SM01409 M3Q_3602 M3Q_3603 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. M3Q_3603 SM00954 Region found in RelA / SpoT proteins M3Q_3619 SM00965 Secretin and TonB N terminus short domain M3Q_3623 SM00842 Cell division protein FtsA M3Q_3649 SM00671 Sel1-like repeats. M3Q_3650 SM00382 ATPases associated with a variety of cellular activities M3Q_3653 SM00947 Carbonic anhydrase M3Q_3654 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_3654 SM00732 Likely ribonuclease with RNase H fold. M3Q_3656 SM00671 Sel1-like repeats. M3Q_3657 SM00382 ATPases associated with a variety of cellular activities M3Q_3660 SM00947 Carbonic anhydrase M3Q_3661 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_3661 SM00732 Likely ribonuclease with RNase H fold. M3Q_3662 SM00448 cheY-homologous receiver domain M3Q_3662 SM00862 Transcriptional regulatory protein, C terminal M3Q_3663 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M3Q_3663 SM00387 Histidine kinase-like ATPases M3Q_3663 SM00388 His Kinase A (phosphoacceptor) domain M3Q_3670 SM00474 3'-5' exonuclease M3Q_3672 SM00530 Helix-turn-helix XRE-family like proteins M3Q_3676 SM00357 Cold shock protein domain M3Q_3680 SM00342 helix_turn_helix, arabinose operon control protein M3Q_3684 SM00477 DNA/RNA non-specific endonuclease M3Q_3684 SM00892 DNA/RNA non-specific endonuclease M3Q_369 SM00823 Phosphopantetheine attachment site M3Q_369 SM00824 Thioesterase M3Q_3693 SM00671 Sel1-like repeats. M3Q_3695 SM00342 helix_turn_helix, arabinose operon control protein M3Q_38 SM00421 helix_turn_helix, Lux Regulon M3Q_38 SM00448 cheY-homologous receiver domain M3Q_382 SM00382 ATPases associated with a variety of cellular activities M3Q_386 SM00342 helix_turn_helix, arabinose operon control protein M3Q_403 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_404 SM00829 Enoylreductase M3Q_408 SM00478 endonuclease III M3Q_408 SM00525 M3Q_408 M3Q_414 SM00382 ATPases associated with a variety of cellular activities M3Q_419 SM01130 M3Q_419 M3Q_42 SM00344 helix_turn_helix ASNC type M3Q_425 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_430 SM00434 DNA Topoisomerase IV M3Q_438 SM01130 M3Q_438 M3Q_439 SM01007 Class II Aldolase and Adducin N-terminal domain M3Q_440 SM00345 helix_turn_helix gluconate operon transcriptional repressor M3Q_444 SM00382 ATPases associated with a variety of cellular activities M3Q_468 SM00382 ATPases associated with a variety of cellular activities M3Q_486 SM00938 Nitrogen regulatory protein P-II M3Q_499 SM00245 tail specific protease M3Q_50 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor M3Q_500 SM00382 ATPases associated with a variety of cellular activities M3Q_500 SM00448 cheY-homologous receiver domain M3Q_501 SM00387 Histidine kinase-like ATPases M3Q_501 SM00388 His Kinase A (phosphoacceptor) domain M3Q_502 SM00421 helix_turn_helix, Lux Regulon M3Q_502 SM00448 cheY-homologous receiver domain M3Q_508 SM00899 M3Q_508 M3Q_52 SM00937 M3Q_52 M3Q_526 SM00448 cheY-homologous receiver domain M3Q_526 SM00850 LytTr DNA-binding domain M3Q_532 SM00528 Domain in histone-like proteins of HNS family M3Q_534 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M3Q_536 SM00240 Forkhead associated domain M3Q_542 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. M3Q_542 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. M3Q_543 SM00649 Ribosomal protein L11/L12 M3Q_548 SM00663 RNA polymerase I subunit A N-terminus M3Q_556 SM00387 Histidine kinase-like ATPases M3Q_561 SM00422 helix_turn_helix, mercury resistance M3Q_57 SM00116 Domain in cystathionine beta-synthase and other proteins. M3Q_57 SM01240 M3Q_57 M3Q_570 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M3Q_570 SM00465 GIY-YIG type nucleases (URI domain) M3Q_573 SM00342 helix_turn_helix, arabinose operon control protein M3Q_575 SM00346 helix_turn_helix isocitrate lyase regulation M3Q_579 SM00732 Likely ribonuclease with RNase H fold. M3Q_584 SM00967 RNA 2'-O ribose methyltransferase substrate binding M3Q_59 SM00849 Metallo-beta-lactamase superfamily M3Q_593 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_614 SM00382 ATPases associated with a variety of cellular activities M3Q_616 SM01387 M3Q_616 M3Q_617 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_617 SM00322 K homology RNA-binding domain M3Q_620 SM00271 DnaJ molecular chaperone homology domain M3Q_624 SM00487 DEAD-like helicases superfamily M3Q_624 SM00490 helicase superfamily c-terminal domain M3Q_630 SM00116 Domain in cystathionine beta-synthase and other proteins. M3Q_630 SM01091 Transporter associated domain M3Q_637 SM00849 Metallo-beta-lactamase superfamily M3Q_650 SM00729 Elongator protein 3, MiaB family, Radical SAM M3Q_654 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_655 SM00363 S4 RNA-binding domain M3Q_663 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. M3Q_673 SM01329 M3Q_673 M3Q_676 SM00316 Ribosomal protein S1-like RNA-binding domain M3Q_679 SM00870 M3Q_679 M3Q_68 SM00864 Tubulin/FtsZ family, GTPase domain M3Q_68 SM00865 Tubulin/FtsZ family, C-terminal domain M3Q_682 SM00859 Semialdehyde dehydrogenase, NAD binding domain M3Q_688 SM00382 ATPases associated with a variety of cellular activities M3Q_69 SM00842 Cell division protein FtsA M3Q_690 SM00829 Enoylreductase M3Q_693 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain M3Q_693 SM00437 Bacterial DNA topoisomerase I DNA-binding domain M3Q_693 SM00493 M3Q_693 M3Q_697 SM00360 RNA recognition motif M3Q_725 SM00671 Sel1-like repeats. M3Q_728 SM00917 LeuA allosteric (dimerisation) domain M3Q_729 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. M3Q_733 SM00382 ATPases associated with a variety of cellular activities M3Q_733 SM00994 ClpX C4-type zinc finger M3Q_733 SM01086 C-terminal, D2-small domain, of ClpB protein M3Q_748 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. M3Q_748 SM00245 tail specific protease M3Q_750 SM00014 Acid phosphatase homologues M3Q_752 SM00562 M3Q_752 M3Q_754 SM00028 Tetratricopeptide repeats M3Q_759 SM00564 beta-propeller repeat M3Q_762 SM00563 Phosphate acyltransferases M3Q_775 SM00825 Beta-ketoacyl synthase M3Q_778 SM00825 Beta-ketoacyl synthase M3Q_783 SM00450 Rhodanese Homology Domain M3Q_785 SM00479 M3Q_785 M3Q_789 SM00382 ATPases associated with a variety of cellular activities M3Q_798 SM00052 Putative diguanylate phosphodiesterase M3Q_798 SM00267 diguanylate cyclase M3Q_801 SM01236 M3Q_801 M3Q_815 SM01002 Alanine dehydrogenase/PNT, C-terminal domain M3Q_815 SM01003 Alanine dehydrogenase/PNT, N-terminal domain M3Q_823 SM00073 Histidine Phosphotransfer domain M3Q_823 SM00387 Histidine kinase-like ATPases M3Q_823 SM00388 His Kinase A (phosphoacceptor) domain M3Q_823 SM00448 cheY-homologous receiver domain M3Q_827 SM00954 Region found in RelA / SpoT proteins M3Q_830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 M3Q_839 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain M3Q_85 SM00267 diguanylate cyclase M3Q_850 SM00873 B3/4 domain M3Q_850 SM00874 tRNA synthetase B5 domain M3Q_850 SM00896 Ferredoxin-fold anticodon binding domain M3Q_851 SM00411 bacterial (prokaryotic) histone like domain M3Q_853 SM00357 Cold shock protein domain M3Q_853 SM00382 ATPases associated with a variety of cellular activities M3Q_853 SM00959 Rho termination factor, N-terminal domain M3Q_857 SM00977 TilS substrate C-terminal domain M3Q_860 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs M3Q_860 SM00474 3'-5' exonuclease M3Q_860 SM00475 5'-3' exonuclease M3Q_860 SM00482 DNA polymerase A domain M3Q_864 SM00382 ATPases associated with a variety of cellular activities M3Q_866 SM00347 helix_turn_helix multiple antibiotic resistance protein M3Q_870 SM00331 Sigma factor PP2C-like phosphatases M3Q_918 SM00342 helix_turn_helix, arabinose operon control protein M3Q_924 SM00903 Flavin reductase like domain M3Q_933 SM00564 beta-propeller repeat M3Q_947 SM00387 Histidine kinase-like ATPases M3Q_951 SM00448 cheY-homologous receiver domain M3Q_951 SM00862 Transcriptional regulatory protein, C terminal M3Q_952 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain M3Q_952 SM00387 Histidine kinase-like ATPases M3Q_952 SM00388 His Kinase A (phosphoacceptor) domain M3Q_954 SM00267 diguanylate cyclase M3Q_959 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M3Q_960 SM00926 Molybdopterin oxidoreductase Fe4S4 domain M3Q_960 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M3Q_969 SM00357 Cold shock protein domain M3Q_99 SM00387 Histidine kinase-like ATPases M3Q_99 SM00433 TopoisomeraseII M3Q_997 SM00382 ATPases associated with a variety of cellular activities M3Q_997 SM00962 SRP54-type protein, GTPase domain M3Q_997 SM00963 SRP54-type protein, helical bundle domain