locus-tag class description KQ257_00020 PF02773 S-adenosylmethionine synthetase, C-terminal domain KQ257_00020 PF02772 S-adenosylmethionine synthetase, central domain KQ257_00020 PF00438 S-adenosylmethionine synthetase, N-terminal domain KQ257_00025 PF02779 Transketolase, pyrimidine binding domain KQ257_00025 PF02780 Transketolase, C-terminal domain KQ257_00025 PF00456 Transketolase, thiamine diphosphate binding domain KQ257_00035 PF04264 YceI-like domain KQ257_00045 PF09992 Phosphodiester glycosidase KQ257_00055 PF05958 tRNA (Uracil-5-)-methyltransferase KQ257_00060 PF04229 GrpB protein KQ257_00065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KQ257_00065 PF14850 DNA-binding domain of Proline dehydrogenase KQ257_00065 PF01619 Proline dehydrogenase KQ257_00065 PF00171 Aldehyde dehydrogenase family KQ257_00070 PF01037 Lrp/AsnC ligand binding domain KQ257_00075 PF00474 Sodium:solute symporter family KQ257_00080 PF02146 Sir2 family KQ257_00085 PF01597 Glycine cleavage H-protein KQ257_00090 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ257_00090 PF12833 Helix-turn-helix domain KQ257_00100 PF00005 ABC transporter KQ257_00100 PF00664 ABC transporter transmembrane region KQ257_00105 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KQ257_00110 PF06912 Protein of unknown function (DUF1275) KQ257_00115 PF00375 Sodium:dicarboxylate symporter family KQ257_00130 PF08007 Cupin superfamily protein KQ257_00135 PF02545 Maf-like protein KQ257_00145 PF00162 Phosphoglycerate kinase KQ257_00155 PF01116 Fructose-bisphosphate aldolase class-II KQ257_00160 PF00639 PPIC-type PPIASE domain KQ257_00160 PF09312 SurA N-terminal domain KQ257_00165 PF04453 LPS transport system D KQ257_00165 PF03968 OstA-like protein KQ257_00170 PF01636 Phosphotransferase enzyme family KQ257_00175 PF00483 Nucleotidyl transferase KQ257_00180 PF02527 rRNA small subunit methyltransferase G KQ257_00185 PF13614 AAA domain KQ257_00190 PF17762 HTH domain found in ParB protein KQ257_00190 PF02195 ParB-like nuclease domain KQ257_00195 PF01618 MotA/TolQ/ExbB proton channel family KQ257_00205 PF00664 ABC transporter transmembrane region KQ257_00205 PF00005 ABC transporter KQ257_00210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KQ257_00215 PF02348 Cytidylyltransferase KQ257_00220 PF09115 DNA polymerase III, delta subunit, C terminal KQ257_00230 PF01026 TatD related DNase KQ257_00245 PF02501 Type II secretion system (T2SS), protein I KQ257_00245 PF07963 Prokaryotic N-terminal methylation motif KQ257_00250 PF07963 Prokaryotic N-terminal methylation motif KQ257_00250 PF11612 Type II secretion system (T2SS), protein J KQ257_00255 PF03934 Type II secretion system (T2SS), protein K KQ257_00265 PF03167 Uracil DNA glycosylase superfamily KQ257_00275 PF14437 MafB19-like deaminase KQ257_00285 PF02224 Cytidylate kinase KQ257_00290 PF00575 S1 RNA binding domain KQ257_00295 PF00216 Bacterial DNA-binding protein KQ257_00305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KQ257_00315 PF00743 Flavin-binding monooxygenase-like KQ257_00325 PF03969 AFG1-like ATPase KQ257_00330 PF01274 Malate synthase KQ257_00340 PF02472 Biopolymer transport protein ExbD/TolR KQ257_00345 PF02472 Biopolymer transport protein ExbD/TolR KQ257_00350 PF01618 MotA/TolQ/ExbB proton channel family KQ257_00360 PF07715 TonB-dependent Receptor Plug Domain KQ257_00360 PF00593 TonB dependent receptor KQ257_00375 PF01432 Peptidase family M3 KQ257_00380 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_00385 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_00390 PF00005 ABC transporter KQ257_00390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ257_00405 PF00459 Inositol monophosphatase family KQ257_00415 PF01649 Ribosomal protein S20 KQ257_00420 PF13460 NAD(P)H-binding KQ257_00425 PF03737 Aldolase/RraA KQ257_00445 PF00271 Helicase conserved C-terminal domain KQ257_00445 PF03461 TRCF domain KQ257_00445 PF17757 UvrB interaction domain KQ257_00445 PF00270 DEAD/DEAH box helicase KQ257_00445 PF02559 CarD-like/TRCF domain KQ257_00455 PF00211 Adenylate and Guanylate cyclase catalytic domain KQ257_00460 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_00465 PF00012 Hsp70 protein KQ257_00470 PF00226 DnaJ domain KQ257_00470 PF07743 HSCB C-terminal oligomerisation domain KQ257_00475 PF01521 Iron-sulphur cluster biosynthesis KQ257_00480 PF01592 NifU-like N terminal domain KQ257_00485 PF00266 Aminotransferase class-V KQ257_00490 PF02082 Transcriptional regulator KQ257_00505 PF00216 Bacterial DNA-binding protein KQ257_00510 PF00639 PPIC-type PPIASE domain KQ257_00510 PF09312 SurA N-terminal domain KQ257_00515 PF12833 Helix-turn-helix domain KQ257_00515 PF12852 Cupin KQ257_00520 PF00487 Fatty acid desaturase KQ257_00525 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_00525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_00525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_00530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_00530 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_00530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_00535 PF03109 ABC1 family KQ257_00545 PF04073 Aminoacyl-tRNA editing domain KQ257_00550 PF06276 Ferric iron reductase FhuF-like transporter KQ257_00550 PF04183 IucA / IucC family KQ257_00555 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ257_00560 PF07690 Major Facilitator Superfamily KQ257_00565 PF04183 IucA / IucC family KQ257_00565 PF06276 Ferric iron reductase FhuF-like transporter KQ257_00570 PF04183 IucA / IucC family KQ257_00570 PF06276 Ferric iron reductase FhuF-like transporter KQ257_00580 PF03737 Aldolase/RraA KQ257_00585 PF07715 TonB-dependent Receptor Plug Domain KQ257_00585 PF00593 TonB dependent receptor KQ257_00610 PF13419 Haloacid dehalogenase-like hydrolase KQ257_00620 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KQ257_00625 PF02277 Phosphoribosyltransferase KQ257_00640 PF02654 Cobalamin-5-phosphate synthase KQ257_00645 PF00793 DAHP synthetase I family KQ257_00650 PF01925 Sulfite exporter TauE/SafE KQ257_00670 PF00593 TonB dependent receptor KQ257_00670 PF07715 TonB-dependent Receptor Plug Domain KQ257_00675 PF02684 Lipid-A-disaccharide synthetase KQ257_00685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ257_00690 PF00005 ABC transporter KQ257_00725 PF01230 HIT domain KQ257_00755 PF08241 Methyltransferase domain KQ257_00760 PF00561 alpha/beta hydrolase fold KQ257_00765 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ257_00775 PF02575 YbaB/EbfC DNA-binding family KQ257_00780 PF13662 Toprim domain KQ257_00780 PF02132 RecR protein KQ257_00785 PF01612 3'-5' exonuclease KQ257_00785 PF00570 HRDC domain KQ257_00805 PF05166 YcgL domain KQ257_00815 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_00815 PF17862 AAA+ lid domain KQ257_00815 PF01434 Peptidase family M41 KQ257_00825 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_00830 PF05175 Methyltransferase small domain KQ257_00835 PF01264 Chorismate synthase KQ257_00840 PF00990 Diguanylate cyclase, GGDEF domain KQ257_00840 PF08448 PAS fold KQ257_00855 PF04055 Radical SAM superfamily KQ257_00860 PF00676 Dehydrogenase E1 component KQ257_00865 PF02779 Transketolase, pyrimidine binding domain KQ257_00865 PF02780 Transketolase, C-terminal domain KQ257_00870 PF02817 e3 binding domain KQ257_00870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ257_00870 PF00364 Biotin-requiring enzyme KQ257_00875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_00875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ257_00880 PF00106 short chain dehydrogenase KQ257_00885 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_00885 PF00107 Zinc-binding dehydrogenase KQ257_00890 PF01062 Bestrophin, RFP-TM, chloride channel KQ257_00895 PF02954 Bacterial regulatory protein, Fis family KQ257_00895 PF00072 Response regulator receiver domain KQ257_00895 PF00158 Sigma-54 interaction domain KQ257_00900 PF04273 Putative phosphatase (DUF442) KQ257_00900 PF00753 Metallo-beta-lactamase superfamily KQ257_00905 PF00753 Metallo-beta-lactamase superfamily KQ257_00905 PF04273 Putative phosphatase (DUF442) KQ257_00910 PF01925 Sulfite exporter TauE/SafE KQ257_00925 PF12833 Helix-turn-helix domain KQ257_00925 PF06445 GyrI-like small molecule binding domain KQ257_00930 PF01638 HxlR-like helix-turn-helix KQ257_00935 PF02525 Flavodoxin-like fold KQ257_00940 PF02417 Chromate transporter KQ257_00945 PF07702 UTRA domain KQ257_00945 PF00392 Bacterial regulatory proteins, gntR family KQ257_00960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ257_00965 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_00970 PF00005 ABC transporter KQ257_00985 PF00083 Sugar (and other) transporter KQ257_00990 PF07715 TonB-dependent Receptor Plug Domain KQ257_00990 PF00593 TonB dependent receptor KQ257_00995 PF10415 Fumarase C C-terminus KQ257_00995 PF00206 Lyase KQ257_01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01010 PF03466 LysR substrate binding domain KQ257_01015 PF03466 LysR substrate binding domain KQ257_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01020 PF00108 Thiolase, N-terminal domain KQ257_01020 PF02803 Thiolase, C-terminal domain KQ257_01025 PF02667 Short chain fatty acid transporter KQ257_01030 PF01144 Coenzyme A transferase KQ257_01035 PF01144 Coenzyme A transferase KQ257_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01040 PF03466 LysR substrate binding domain KQ257_01060 PF00440 Bacterial regulatory proteins, tetR family KQ257_01080 PF12833 Helix-turn-helix domain KQ257_01080 PF06719 AraC-type transcriptional regulator N-terminus KQ257_01085 PF07690 Major Facilitator Superfamily KQ257_01090 PF01738 Dienelactone hydrolase family KQ257_01105 PF01613 Flavin reductase like domain KQ257_01115 PF12833 Helix-turn-helix domain KQ257_01115 PF14525 AraC-binding-like domain KQ257_01120 PF00970 Oxidoreductase FAD-binding domain KQ257_01120 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_01120 PF00175 Oxidoreductase NAD-binding domain KQ257_01125 PF00866 Ring hydroxylating beta subunit KQ257_01130 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ257_01130 PF00355 Rieske [2Fe-2S] domain KQ257_01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01135 PF03459 TOBE domain KQ257_01145 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_01150 PF00005 ABC transporter KQ257_01150 PF03459 TOBE domain KQ257_01155 PF00106 short chain dehydrogenase KQ257_01160 PF00857 Isochorismatase family KQ257_01160 PF00550 Phosphopantetheine attachment site KQ257_01170 PF00149 Calcineurin-like phosphoesterase KQ257_01175 PF02503 Polyphosphate kinase middle domain KQ257_01175 PF13090 Polyphosphate kinase C-terminal domain 2 KQ257_01175 PF17941 Polyphosphate kinase C-terminal domain 1 KQ257_01175 PF13089 Polyphosphate kinase N-terminal domain KQ257_01180 PF08042 PqqA family KQ257_01185 PF12706 Beta-lactamase superfamily domain KQ257_01190 PF03070 TENA/THI-4/PQQC family KQ257_01195 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KQ257_01200 PF13186 Iron-sulfur cluster-binding domain KQ257_01200 PF04055 Radical SAM superfamily KQ257_01205 PF01244 Membrane dipeptidase (Peptidase family M19) KQ257_01220 PF13091 PLD-like domain KQ257_01235 PF00199 Catalase KQ257_01245 PF00107 Zinc-binding dehydrogenase KQ257_01245 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_01255 PF00419 Fimbrial protein KQ257_01275 PF17755 UvrA DNA-binding domain KQ257_01275 PF00005 ABC transporter KQ257_01275 PF17760 UvrA interaction domain KQ257_01280 PF00873 AcrB/AcrD/AcrF family KQ257_01285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ257_01285 PF00529 HlyD membrane-fusion protein of T1SS KQ257_01290 PF00072 Response regulator receiver domain KQ257_01290 PF00486 Transcriptional regulatory protein, C terminal KQ257_01295 PF16527 Two-component sensor protein CpxA, periplasmic domain KQ257_01295 PF00672 HAMP domain KQ257_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_01295 PF00512 His Kinase A (phospho-acceptor) domain KQ257_01305 PF02311 AraC-like ligand binding domain KQ257_01305 PF12833 Helix-turn-helix domain KQ257_01310 PF12146 Serine aminopeptidase, S33 KQ257_01355 PF04607 Region found in RelA / SpoT proteins KQ257_01355 PF13291 ACT domain KQ257_01355 PF02824 TGS domain KQ257_01365 PF01975 Survival protein SurE KQ257_01390 PF07690 Major Facilitator Superfamily KQ257_01395 PF13533 Biotin-lipoyl like KQ257_01415 PF13737 Transposase DDE domain KQ257_01445 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ257_01450 PF14572 Phosphoribosyl synthetase-associated domain KQ257_01450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ257_01470 PF00005 ABC transporter KQ257_01475 PF01032 FecCD transport family KQ257_01480 PF01497 Periplasmic binding protein KQ257_01485 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_01485 PF00107 Zinc-binding dehydrogenase KQ257_01490 PF06719 AraC-type transcriptional regulator N-terminus KQ257_01490 PF12833 Helix-turn-helix domain KQ257_01495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ257_01495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ257_01500 PF07690 Major Facilitator Superfamily KQ257_01505 PF01370 NAD dependent epimerase/dehydratase family KQ257_01510 PF03466 LysR substrate binding domain KQ257_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01520 PF00920 Dehydratase family KQ257_01540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ257_01540 PF00529 HlyD membrane-fusion protein of T1SS KQ257_01550 PF03737 Aldolase/RraA KQ257_01555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ257_01555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ257_01555 PF01842 ACT domain KQ257_01560 PF07690 Major Facilitator Superfamily KQ257_01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01580 PF03466 LysR substrate binding domain KQ257_01590 PF08450 SMP-30/Gluconolactonase/LRE-like region KQ257_01595 PF07702 UTRA domain KQ257_01595 PF00392 Bacterial regulatory proteins, gntR family KQ257_01605 PF04909 Amidohydrolase KQ257_01610 PF07690 Major Facilitator Superfamily KQ257_01655 PF07687 Peptidase dimerisation domain KQ257_01655 PF01546 Peptidase family M20/M25/M40 KQ257_01665 PF00999 Sodium/hydrogen exchanger family KQ257_01665 PF02254 TrkA-N domain KQ257_01670 PF07995 Glucose / Sorbosone dehydrogenase KQ257_01675 PF03466 LysR substrate binding domain KQ257_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01680 PF00857 Isochorismatase family KQ257_01690 PF08359 YsiA-like protein, C-terminal region KQ257_01690 PF00440 Bacterial regulatory proteins, tetR family KQ257_01695 PF12706 Beta-lactamase superfamily domain KQ257_01705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_01715 PF13411 MerR HTH family regulatory protein KQ257_01725 PF00106 short chain dehydrogenase KQ257_01730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ257_01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_01735 PF00561 alpha/beta hydrolase fold KQ257_01745 PF00171 Aldehyde dehydrogenase family KQ257_01755 PF07690 Major Facilitator Superfamily KQ257_01760 PF00920 Dehydratase family KQ257_01765 PF07729 FCD domain KQ257_01765 PF00392 Bacterial regulatory proteins, gntR family KQ257_01775 PF03466 LysR substrate binding domain KQ257_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01780 PF13378 Enolase C-terminal domain-like KQ257_01780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KQ257_01785 PF02426 Muconolactone delta-isomerase KQ257_01790 PF00775 Dioxygenase KQ257_01790 PF04444 Catechol dioxygenase N terminus KQ257_01795 PF01144 Coenzyme A transferase KQ257_01800 PF01144 Coenzyme A transferase KQ257_01805 PF00108 Thiolase, N-terminal domain KQ257_01805 PF02803 Thiolase, C-terminal domain KQ257_01810 PF12146 Serine aminopeptidase, S33 KQ257_01815 PF01804 Penicillin amidase KQ257_01820 PF00171 Aldehyde dehydrogenase family KQ257_01830 PF02727 Copper amine oxidase, N2 domain KQ257_01830 PF07833 Copper amine oxidase N-terminal domain KQ257_01830 PF02728 Copper amine oxidase, N3 domain KQ257_01830 PF01179 Copper amine oxidase, enzyme domain KQ257_01835 PF12833 Helix-turn-helix domain KQ257_01835 PF02311 AraC-like ligand binding domain KQ257_01840 PF01613 Flavin reductase like domain KQ257_01845 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_01845 PF00175 Oxidoreductase NAD-binding domain KQ257_01860 PF00355 Rieske [2Fe-2S] domain KQ257_01860 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ257_01875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ257_01880 PF01425 Amidase KQ257_01890 PF07690 Major Facilitator Superfamily KQ257_01900 PF00106 short chain dehydrogenase KQ257_01915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_01915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_01915 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_01920 PF03466 LysR substrate binding domain KQ257_01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_01925 PF09339 IclR helix-turn-helix domain KQ257_01925 PF01614 Bacterial transcriptional regulator KQ257_01930 PF00753 Metallo-beta-lactamase superfamily KQ257_01940 PF04143 Sulphur transport KQ257_01950 PF01011 PQQ enzyme repeat KQ257_01950 PF13360 PQQ-like domain KQ257_01955 PF04966 Carbohydrate-selective porin, OprB family KQ257_01960 PF05048 Periplasmic copper-binding protein (NosD) KQ257_01965 PF01487 Type I 3-dehydroquinase KQ257_01970 PF00775 Dioxygenase KQ257_01975 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KQ257_01975 PF00775 Dioxygenase KQ257_01980 PF02627 Carboxymuconolactone decarboxylase family KQ257_01985 PF07690 Major Facilitator Superfamily KQ257_01990 PF00561 alpha/beta hydrolase fold KQ257_01995 PF00206 Lyase KQ257_01995 PF10397 Adenylosuccinate lyase C-terminus KQ257_02000 PF00108 Thiolase, N-terminal domain KQ257_02000 PF02803 Thiolase, C-terminal domain KQ257_02005 PF01144 Coenzyme A transferase KQ257_02010 PF01144 Coenzyme A transferase KQ257_02015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KQ257_02020 PF04977 Septum formation initiator KQ257_02025 PF04239 Protein of unknown function (DUF421) KQ257_02030 PF00113 Enolase, C-terminal TIM barrel domain KQ257_02030 PF03952 Enolase, N-terminal domain KQ257_02035 PF00793 DAHP synthetase I family KQ257_02040 PF06418 CTP synthase N-terminus KQ257_02040 PF00117 Glutamine amidotransferase class-I KQ257_02070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ257_02070 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_02085 PF00793 DAHP synthetase I family KQ257_02090 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KQ257_02095 PF02861 Clp amino terminal domain, pathogenicity island component KQ257_02095 PF10431 C-terminal, D2-small domain, of ClpB protein KQ257_02095 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_02095 PF07724 AAA domain (Cdc48 subfamily) KQ257_02095 PF17871 AAA lid domain KQ257_02100 PF02617 ATP-dependent Clp protease adaptor protein ClpS KQ257_02110 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ257_02110 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ257_02125 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KQ257_02130 PF00585 C-terminal regulatory domain of Threonine dehydratase KQ257_02130 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_02135 PF02254 TrkA-N domain KQ257_02135 PF02080 TrkA-C domain KQ257_02140 PF02386 Cation transport protein KQ257_02145 PF02253 Phospholipase A1 KQ257_02150 PF08367 Peptidase M16C associated KQ257_02150 PF00675 Insulinase (Peptidase family M16) KQ257_02150 PF05193 Peptidase M16 inactive domain KQ257_02155 PF07715 TonB-dependent Receptor Plug Domain KQ257_02155 PF00593 TonB dependent receptor KQ257_02160 PF00294 pfkB family carbohydrate kinase KQ257_02170 PF07290 Protein of unknown function (DUF1449) KQ257_02180 PF01654 Cytochrome bd terminal oxidase subunit I KQ257_02185 PF02322 Cytochrome bd terminal oxidase subunit II KQ257_02190 PF08173 Membrane bound YbgT-like protein KQ257_02205 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KQ257_02215 PF00448 SRP54-type protein, GTPase domain KQ257_02215 PF02881 SRP54-type protein, helical bundle domain KQ257_02240 PF00571 CBS domain KQ257_02240 PF00478 IMP dehydrogenase / GMP reductase domain KQ257_02245 PF00202 Aminotransferase class-III KQ257_02250 PF00462 Glutaredoxin KQ257_02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_02260 PF03466 LysR substrate binding domain KQ257_02265 PF00557 Metallopeptidase family M24 KQ257_02270 PF05525 Branched-chain amino acid transport protein KQ257_02295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KQ257_02295 PF00381 PTS HPr component phosphorylation site KQ257_02295 PF00391 PEP-utilising enzyme, mobile domain KQ257_02295 PF02896 PEP-utilising enzyme, TIM barrel domain KQ257_02295 PF05524 PEP-utilising enzyme, N-terminal KQ257_02300 PF00294 pfkB family carbohydrate kinase KQ257_02305 PF02378 Phosphotransferase system, EIIC KQ257_02305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KQ257_02320 PF00563 EAL domain KQ257_02320 PF00990 Diguanylate cyclase, GGDEF domain KQ257_02320 PF03707 Bacterial signalling protein N terminal repeat KQ257_02330 PF07995 Glucose / Sorbosone dehydrogenase KQ257_02340 PF00872 Transposase, Mutator family KQ257_02350 PF01740 STAS domain KQ257_02350 PF00916 Sulfate permease family KQ257_02355 PF05922 Peptidase inhibitor I9 KQ257_02355 PF00082 Subtilase family KQ257_02365 PF00324 Amino acid permease KQ257_02370 PF00266 Aminotransferase class-V KQ257_02375 PF01037 Lrp/AsnC ligand binding domain KQ257_02400 PF13419 Haloacid dehalogenase-like hydrolase KQ257_02405 PF01479 S4 domain KQ257_02410 PF00154 recA bacterial DNA recombination protein KQ257_02415 PF02631 RecX family KQ257_02430 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KQ257_02430 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_02435 PF07977 FabA-like domain KQ257_02440 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_02440 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KQ257_02450 PF01103 Surface antigen KQ257_02450 PF07244 Surface antigen variable number repeat KQ257_02455 PF13180 PDZ domain KQ257_02455 PF17820 PDZ domain KQ257_02455 PF02163 Peptidase family M50 KQ257_02460 PF13288 DXP reductoisomerase C-terminal domain KQ257_02460 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KQ257_02460 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KQ257_02470 PF01255 Putative undecaprenyl diphosphate synthase KQ257_02475 PF01765 Ribosome recycling factor KQ257_02480 PF00696 Amino acid kinase family KQ257_02485 PF18693 TRAM domain KQ257_02485 PF04055 Radical SAM superfamily KQ257_02485 PF00919 Uncharacterized protein family UPF0004 KQ257_02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_02490 PF00989 PAS fold KQ257_02490 PF00512 His Kinase A (phospho-acceptor) domain KQ257_02495 PF00158 Sigma-54 interaction domain KQ257_02495 PF00072 Response regulator receiver domain KQ257_02495 PF02954 Bacterial regulatory protein, Fis family KQ257_02500 PF00440 Bacterial regulatory proteins, tetR family KQ257_02505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ257_02505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ257_02515 PF02542 YgbB family KQ257_02525 PF01266 FAD dependent oxidoreductase KQ257_02545 PF00206 Lyase KQ257_02545 PF10415 Fumarase C C-terminus KQ257_02550 PF16363 GDP-mannose 4,6 dehydratase KQ257_02555 PF02635 DsrE/DsrF-like family KQ257_02575 PF00892 EamA-like transporter family KQ257_02580 PF00392 Bacterial regulatory proteins, gntR family KQ257_02580 PF00155 Aminotransferase class I and II KQ257_02585 PF01638 HxlR-like helix-turn-helix KQ257_02590 PF03453 MoeA N-terminal region (domain I and II) KQ257_02590 PF03454 MoeA C-terminal region (domain IV) KQ257_02590 PF00994 Probable molybdopterin binding domain KQ257_02595 PF01967 MoaC family KQ257_02595 PF00994 Probable molybdopterin binding domain KQ257_02600 PF02391 MoaE protein KQ257_02610 PF06463 Molybdenum Cofactor Synthesis C KQ257_02610 PF04055 Radical SAM superfamily KQ257_02615 PF00384 Molybdopterin oxidoreductase KQ257_02615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ257_02615 PF01568 Molydopterin dinucleotide binding domain KQ257_02620 PF12804 MobA-like NTP transferase domain KQ257_02625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ257_02625 PF04324 BFD-like [2Fe-2S] binding domain KQ257_02625 PF00384 Molybdopterin oxidoreductase KQ257_02625 PF01568 Molydopterin dinucleotide binding domain KQ257_02630 PF04324 BFD-like [2Fe-2S] binding domain KQ257_02630 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ257_02630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ257_02630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ257_02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_02635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ257_02635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ257_02635 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ257_02635 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_02635 PF13806 Rieske-like [2Fe-2S] domain KQ257_02635 PF04324 BFD-like [2Fe-2S] binding domain KQ257_02645 PF00072 Response regulator receiver domain KQ257_02645 PF00486 Transcriptional regulatory protein, C terminal KQ257_02650 PF00005 ABC transporter KQ257_02660 PF00817 impB/mucB/samB family KQ257_02660 PF13438 Domain of unknown function (DUF4113) KQ257_02660 PF11799 impB/mucB/samB family C-terminal domain KQ257_02665 PF01220 Dehydroquinase class II KQ257_02670 PF00364 Biotin-requiring enzyme KQ257_02675 PF00289 Biotin carboxylase, N-terminal domain KQ257_02675 PF02785 Biotin carboxylase C-terminal domain KQ257_02675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ257_02685 PF12832 MFS_1 like family KQ257_02705 PF00313 'Cold-shock' DNA-binding domain KQ257_02730 PF00182 Chitinase class I KQ257_02765 PF13340 Putative transposase of IS4/5 family (DUF4096) KQ257_02770 PF01551 Peptidase family M23 KQ257_02770 PF01476 LysM domain KQ257_02770 PF08525 Opacity-associated protein A N-terminal motif KQ257_02795 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system KQ257_02900 PF13340 Putative transposase of IS4/5 family (DUF4096) KQ257_02930 PF13737 Transposase DDE domain KQ257_02955 PF00872 Transposase, Mutator family KQ257_03125 PF01645 Conserved region in glutamate synthase KQ257_03140 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KQ257_03140 PF01565 FAD binding domain KQ257_03145 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ257_03155 PF00465 Iron-containing alcohol dehydrogenase KQ257_03160 PF03061 Thioesterase superfamily KQ257_03165 PF05506 Domain of unknown function (DUF756) KQ257_03165 PF04185 Phosphoesterase family KQ257_03175 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KQ257_03175 PF12169 DNA polymerase III subunits gamma and tau domain III KQ257_03175 PF12170 DNA polymerase III tau subunit V interacting with alpha KQ257_03180 PF07690 Major Facilitator Superfamily KQ257_03190 PF00144 Beta-lactamase KQ257_03195 PF01575 MaoC like domain KQ257_03205 PF00108 Thiolase, N-terminal domain KQ257_03205 PF02803 Thiolase, C-terminal domain KQ257_03215 PF03466 LysR substrate binding domain KQ257_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_03220 PF00923 Transaldolase/Fructose-6-phosphate aldolase KQ257_03225 PF01810 LysE type translocator KQ257_03230 PF01037 Lrp/AsnC ligand binding domain KQ257_03240 PF02308 MgtC family KQ257_03245 PF00690 Cation transporter/ATPase, N-terminus KQ257_03245 PF00689 Cation transporting ATPase, C-terminus KQ257_03270 PF00582 Universal stress protein family KQ257_03275 PF00005 ABC transporter KQ257_03275 PF12848 ABC transporter KQ257_03295 PF00593 TonB dependent receptor KQ257_03295 PF07715 TonB-dependent Receptor Plug Domain KQ257_03325 PF00924 Mechanosensitive ion channel KQ257_03330 PF07715 TonB-dependent Receptor Plug Domain KQ257_03330 PF00593 TonB dependent receptor KQ257_03335 PF00440 Bacterial regulatory proteins, tetR family KQ257_03345 PF01037 Lrp/AsnC ligand binding domain KQ257_03350 PF01817 Chorismate mutase type II KQ257_03390 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KQ257_03390 PF01433 Peptidase family M1 domain KQ257_03390 PF11940 Domain of unknown function (DUF3458) Ig-like fold KQ257_03405 PF02110 Hydroxyethylthiazole kinase family KQ257_03410 PF06445 GyrI-like small molecule binding domain KQ257_03420 PF14493 Helix-turn-helix domain KQ257_03420 PF05970 PIF1-like helicase KQ257_03425 PF00465 Iron-containing alcohol dehydrogenase KQ257_03440 PF00171 Aldehyde dehydrogenase family KQ257_03445 PF13520 Amino acid permease KQ257_03450 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KQ257_03455 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KQ257_03460 PF00117 Glutamine amidotransferase class-I KQ257_03460 PF00958 GMP synthase C terminal domain KQ257_03460 PF02540 NAD synthase KQ257_03465 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KQ257_03465 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ257_03470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ257_03475 PF00149 Calcineurin-like phosphoesterase KQ257_03485 PF00881 Nitroreductase family KQ257_03495 PF17209 Hfq protein KQ257_03505 PF01119 DNA mismatch repair protein, C-terminal domain KQ257_03505 PF08676 MutL C terminal dimerisation domain KQ257_03510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KQ257_03515 PF00849 RNA pseudouridylate synthase KQ257_03515 PF01479 S4 domain KQ257_03530 PF00849 RNA pseudouridylate synthase KQ257_03530 PF01479 S4 domain KQ257_03540 PF04284 Protein of unknown function (DUF441) KQ257_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_03545 PF03466 LysR substrate binding domain KQ257_03565 PF00027 Cyclic nucleotide-binding domain KQ257_03565 PF00520 Ion transport protein KQ257_03575 PF00330 Aconitase family (aconitate hydratase) KQ257_03575 PF06434 Aconitate hydratase 2 N-terminus KQ257_03575 PF11791 Aconitate B N-terminal domain KQ257_03590 PF01103 Surface antigen KQ257_03590 PF17243 POTRA domain TamA domain 1 KQ257_03590 PF07244 Surface antigen variable number repeat KQ257_03595 PF07690 Major Facilitator Superfamily KQ257_03600 PF03232 Ubiquinone biosynthesis protein COQ7 KQ257_03610 PF00120 Glutamine synthetase, catalytic domain KQ257_03615 PF00072 Response regulator receiver domain KQ257_03615 PF00486 Transcriptional regulatory protein, C terminal KQ257_03620 PF00512 His Kinase A (phospho-acceptor) domain KQ257_03620 PF13493 Domain of unknown function (DUF4118) KQ257_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_03620 PF02702 Osmosensitive K+ channel His kinase sensor domain KQ257_03625 PF02669 K+-transporting ATPase, c chain KQ257_03635 PF03814 Potassium-transporting ATPase A subunit KQ257_03650 PF03109 ABC1 family KQ257_03655 PF00899 ThiF family KQ257_03660 PF01613 Flavin reductase like domain KQ257_03665 PF13193 AMP-binding enzyme C-terminal domain KQ257_03665 PF00501 AMP-binding enzyme KQ257_03670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_03670 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_03670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_03675 PF00106 short chain dehydrogenase KQ257_03680 PF12833 Helix-turn-helix domain KQ257_03685 PF09084 NMT1/THI5 like KQ257_03690 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_03695 PF17827 PrmC N-terminal domain KQ257_03695 PF13847 Methyltransferase domain KQ257_03700 PF00472 RF-1 domain KQ257_03700 PF03462 PCRF domain KQ257_03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_03710 PF03466 LysR substrate binding domain KQ257_03725 PF00296 Luciferase-like monooxygenase KQ257_03735 PF13994 PgaD-like protein KQ257_03740 PF00535 Glycosyl transferase family 2 KQ257_03745 PF01522 Polysaccharide deacetylase KQ257_03745 PF14883 Hypothetical glycosyl hydrolase family 13 KQ257_03755 PF03618 Kinase/pyrophosphorylase KQ257_03760 PF00391 PEP-utilising enzyme, mobile domain KQ257_03760 PF02896 PEP-utilising enzyme, TIM barrel domain KQ257_03760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KQ257_03770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KQ257_03770 PF06481 COX Aromatic Rich Motif KQ257_03780 PF00510 Cytochrome c oxidase subunit III KQ257_03785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KQ257_03790 PF01040 UbiA prenyltransferase family KQ257_03800 PF01084 Ribosomal protein S18 KQ257_03805 PF03948 Ribosomal protein L9, C-terminal domain KQ257_03805 PF01281 Ribosomal protein L9, N-terminal domain KQ257_03810 PF03796 DnaB-like helicase C terminal domain KQ257_03810 PF00772 DnaB-like helicase N terminal domain KQ257_03815 PF01168 Alanine racemase, N-terminal domain KQ257_03815 PF00842 Alanine racemase, C-terminal domain KQ257_03825 PF01841 Transglutaminase-like superfamily KQ257_03825 PF08379 Bacterial transglutaminase-like N-terminal region KQ257_03835 PF14403 Circularly permuted ATP-grasp type 2 KQ257_03865 PF02954 Bacterial regulatory protein, Fis family KQ257_03870 PF02142 MGS-like domain KQ257_03870 PF01808 AICARFT/IMPCHase bienzyme KQ257_03875 PF02844 Phosphoribosylglycinamide synthetase, N domain KQ257_03875 PF02843 Phosphoribosylglycinamide synthetase, C domain KQ257_03875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KQ257_03880 PF03180 NLPA lipoprotein KQ257_03885 PF09383 NIL domain KQ257_03885 PF00005 ABC transporter KQ257_03890 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_03895 PF00753 Metallo-beta-lactamase superfamily KQ257_03895 PF16123 Hydroxyacylglutathione hydrolase C-terminus KQ257_03905 PF00375 Sodium:dicarboxylate symporter family KQ257_03925 PF07995 Glucose / Sorbosone dehydrogenase KQ257_03930 PF00892 EamA-like transporter family KQ257_03935 PF01177 Asp/Glu/Hydantoin racemase KQ257_03945 PF02470 MlaD protein KQ257_03950 PF04403 Paraquat-inducible protein A KQ257_03980 PF00293 NUDIX domain KQ257_03985 PF00083 Sugar (and other) transporter KQ257_03985 PF08946 Osmosensory transporter coiled coil KQ257_04035 PF00392 Bacterial regulatory proteins, gntR family KQ257_04035 PF07729 FCD domain KQ257_04045 PF03616 Sodium/glutamate symporter KQ257_04050 PF00561 alpha/beta hydrolase fold KQ257_04075 PF04076 Bacterial OB fold (BOF) protein KQ257_04105 PF00324 Amino acid permease KQ257_04110 PF00171 Aldehyde dehydrogenase family KQ257_04115 PF00202 Aminotransferase class-III KQ257_04145 PF03793 PASTA domain KQ257_04145 PF00069 Protein kinase domain KQ257_04165 PF00814 Glycoprotease family KQ257_04170 PF01165 Ribosomal protein S21 KQ257_04175 PF09424 Yqey-like protein KQ257_04180 PF01435 Peptidase family M48 KQ257_04185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ257_04185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ257_04200 PF00156 Phosphoribosyl transferase domain KQ257_04205 PF02674 Colicin V production protein KQ257_04210 PF01180 Dihydroorotate dehydrogenase KQ257_04230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KQ257_04230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KQ257_04235 PF00881 Nitroreductase family KQ257_04245 PF00270 DEAD/DEAH box helicase KQ257_04245 PF00271 Helicase conserved C-terminal domain KQ257_04250 PF00313 'Cold-shock' DNA-binding domain KQ257_04260 PF00140 Sigma-70 factor, region 1.2 KQ257_04260 PF04542 Sigma-70 region 2 KQ257_04260 PF04545 Sigma-70, region 4 KQ257_04265 PF04241 Protein of unknown function (DUF423) KQ257_04275 PF05690 Thiazole biosynthesis protein ThiG KQ257_04285 PF03883 Peroxide stress protein YaaA KQ257_04295 PF00753 Metallo-beta-lactamase superfamily KQ257_04300 PF01546 Peptidase family M20/M25/M40 KQ257_04300 PF07687 Peptidase dimerisation domain KQ257_04310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ257_04315 PF01842 ACT domain KQ257_04315 PF01817 Chorismate mutase type II KQ257_04315 PF00800 Prephenate dehydratase KQ257_04320 PF00756 Putative esterase KQ257_04325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_04325 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_04325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_04330 PF00375 Sodium:dicarboxylate symporter family KQ257_04335 PF00591 Glycosyl transferase family, a/b domain KQ257_04335 PF02885 Glycosyl transferase family, helical bundle domain KQ257_04340 PF07023 Protein of unknown function (DUF1315) KQ257_04345 PF01513 ATP-NAD kinase KQ257_04350 PF00912 Transglycosylase KQ257_04350 PF00905 Penicillin binding protein transpeptidase domain KQ257_04350 PF14814 Bifunctional transglycosylase second domain KQ257_04360 PF00293 NUDIX domain KQ257_04370 PF08521 Two-component sensor kinase N-terminal KQ257_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_04370 PF00512 His Kinase A (phospho-acceptor) domain KQ257_04375 PF00072 Response regulator receiver domain KQ257_04375 PF00486 Transcriptional regulatory protein, C terminal KQ257_04385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ257_04385 PF00437 Type II/IV secretion system protein KQ257_04395 PF01980 tRNA-methyltransferase O KQ257_04395 PF18389 TrmO C-terminal domain KQ257_04400 PF00970 Oxidoreductase FAD-binding domain KQ257_04400 PF00175 Oxidoreductase NAD-binding domain KQ257_04405 PF02567 Phenazine biosynthesis-like protein KQ257_04410 PF00155 Aminotransferase class I and II KQ257_04410 PF00392 Bacterial regulatory proteins, gntR family KQ257_04415 PF01136 Peptidase family U32 KQ257_04415 PF16325 Peptidase family U32 C-terminal domain KQ257_04420 PF00037 4Fe-4S binding domain KQ257_04425 PF00893 Small Multidrug Resistance protein KQ257_04430 PF00005 ABC transporter KQ257_04435 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_04440 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_04445 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ257_04450 PF03466 LysR substrate binding domain KQ257_04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_04455 PF13533 Biotin-lipoyl like KQ257_04460 PF00873 AcrB/AcrD/AcrF family KQ257_04465 PF02321 Outer membrane efflux protein KQ257_04470 PF00464 Serine hydroxymethyltransferase KQ257_04545 PF08346 AntA/AntB antirepressor KQ257_04545 PF10548 P22AR C-terminal domain KQ257_04645 PF02810 SEC-C motif KQ257_04645 PF01043 SecA preprotein cross-linking domain KQ257_04645 PF07516 SecA Wing and Scaffold domain KQ257_04645 PF07517 SecA DEAD-like domain KQ257_04655 PF03592 Terminase small subunit KQ257_04735 PF00772 DnaB-like helicase N terminal domain KQ257_04735 PF03796 DnaB-like helicase C terminal domain KQ257_04840 PF00589 Phage integrase family KQ257_04845 PF00005 ABC transporter KQ257_04850 PF01061 ABC-2 type transporter KQ257_04855 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KQ257_04855 PF14489 QueF-like protein KQ257_04865 PF01098 Cell cycle protein KQ257_04870 PF13406 Transglycosylase SLT domain KQ257_04875 PF03330 Lytic transglycolase KQ257_04875 PF05036 Sporulation related domain KQ257_04895 PF12833 Helix-turn-helix domain KQ257_04905 PF00889 Elongation factor TS KQ257_04910 PF00318 Ribosomal protein S2 KQ257_04915 PF00557 Metallopeptidase family M24 KQ257_04925 PF07690 Major Facilitator Superfamily KQ257_04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_04935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ257_04940 PF04055 Radical SAM superfamily KQ257_04945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_04945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_04945 PF09317 Domain of unknown function (DUF1974) KQ257_04960 PF05221 S-adenosyl-L-homocysteine hydrolase KQ257_04960 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KQ257_04965 PF02219 Methylenetetrahydrofolate reductase KQ257_04970 PF04452 RNA methyltransferase KQ257_04980 PF00665 Integrase core domain KQ257_04980 PF13936 Helix-turn-helix domain KQ257_04990 PF00390 Malic enzyme, N-terminal domain KQ257_04990 PF03949 Malic enzyme, NAD binding domain KQ257_04990 PF01515 Phosphate acetyl/butaryl transferase KQ257_04995 PF01743 Poly A polymerase head domain KQ257_04995 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ257_05000 PF13180 PDZ domain KQ257_05005 PF01784 NIF3 (NGG1p interacting factor 3) KQ257_05010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KQ257_05010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KQ257_05045 PF01040 UbiA prenyltransferase family KQ257_05050 PF04345 Chorismate lyase KQ257_05055 PF00120 Glutamine synthetase, catalytic domain KQ257_05055 PF03951 Glutamine synthetase, beta-Grasp domain KQ257_05060 PF00854 POT family KQ257_05070 PF00117 Glutamine amidotransferase class-I KQ257_05075 PF11838 ERAP1-like C-terminal domain KQ257_05075 PF01433 Peptidase family M1 domain KQ257_05080 PF07715 TonB-dependent Receptor Plug Domain KQ257_05080 PF00593 TonB dependent receptor KQ257_05085 PF02885 Glycosyl transferase family, helical bundle domain KQ257_05085 PF00591 Glycosyl transferase family, a/b domain KQ257_05090 PF00218 Indole-3-glycerol phosphate synthase KQ257_05105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KQ257_05105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KQ257_05110 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_05110 PF01799 [2Fe-2S] binding domain KQ257_05115 PF01227 GTP cyclohydrolase I KQ257_05125 PF00144 Beta-lactamase KQ257_05140 PF05675 Protein of unknown function (DUF817) KQ257_05145 PF01208 Uroporphyrinogen decarboxylase (URO-D) KQ257_05155 PF00425 chorismate binding enzyme KQ257_05165 PF00975 Thioesterase domain KQ257_05170 PF00005 ABC transporter KQ257_05175 PF00005 ABC transporter KQ257_05185 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ257_05190 PF00857 Isochorismatase family KQ257_05190 PF00550 Phosphopantetheine attachment site KQ257_05195 PF00501 AMP-binding enzyme KQ257_05195 PF13193 AMP-binding enzyme C-terminal domain KQ257_05200 PF00501 AMP-binding enzyme KQ257_05200 PF00668 Condensation domain KQ257_05200 PF00550 Phosphopantetheine attachment site KQ257_05205 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ257_05210 PF07715 TonB-dependent Receptor Plug Domain KQ257_05210 PF00593 TonB dependent receptor KQ257_05215 PF01497 Periplasmic binding protein KQ257_05220 PF00005 ABC transporter KQ257_05225 PF01032 FecCD transport family KQ257_05230 PF01032 FecCD transport family KQ257_05235 PF00668 Condensation domain KQ257_05235 PF13193 AMP-binding enzyme C-terminal domain KQ257_05235 PF00975 Thioesterase domain KQ257_05235 PF00550 Phosphopantetheine attachment site KQ257_05235 PF00501 AMP-binding enzyme KQ257_05240 PF00550 Phosphopantetheine attachment site KQ257_05240 PF00501 AMP-binding enzyme KQ257_05240 PF13193 AMP-binding enzyme C-terminal domain KQ257_05240 PF00668 Condensation domain KQ257_05250 PF13309 HTH domain KQ257_05250 PF08348 YheO-like PAS domain KQ257_05255 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_05260 PF02678 Pirin KQ257_05260 PF17954 Quercetinase C-terminal cupin domain KQ257_05285 PF00872 Transposase, Mutator family KQ257_05300 PF12833 Helix-turn-helix domain KQ257_05300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ257_05305 PF01370 NAD dependent epimerase/dehydratase family KQ257_05315 PF00561 alpha/beta hydrolase fold KQ257_05320 PF00743 Flavin-binding monooxygenase-like KQ257_05330 PF03466 LysR substrate binding domain KQ257_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_05335 PF00857 Isochorismatase family KQ257_05365 PF00872 Transposase, Mutator family KQ257_05380 PF04328 Selenoprotein, putative KQ257_05385 PF02554 Carbon starvation protein CstA KQ257_05385 PF13722 5TM C-terminal transporter carbon starvation CstA KQ257_05390 PF09285 Elongation factor P, C-terminal KQ257_05390 PF01132 Elongation factor P (EF-P) OB domain KQ257_05390 PF08207 Elongation factor P (EF-P) KOW-like domain KQ257_05395 PF04055 Radical SAM superfamily KQ257_05405 PF00563 EAL domain KQ257_05405 PF12792 CSS motif domain associated with EAL KQ257_05410 PF01197 Ribosomal protein L31 KQ257_05415 PF13593 SBF-like CPA transporter family (DUF4137) KQ257_05420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ257_05425 PF07690 Major Facilitator Superfamily KQ257_05430 PF13654 AAA domain KQ257_05430 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ257_05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_05435 PF03466 LysR substrate binding domain KQ257_05440 PF01476 LysM domain KQ257_05440 PF01551 Peptidase family M23 KQ257_05445 PF01975 Survival protein SurE KQ257_05460 PF07943 Penicillin-binding protein 5, C-terminal domain KQ257_05460 PF00768 D-alanyl-D-alanine carboxypeptidase KQ257_05465 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_05470 PF13344 Haloacid dehalogenase-like hydrolase KQ257_05470 PF00293 NUDIX domain KQ257_05480 PF04356 Protein of unknown function (DUF489) KQ257_05485 PF08328 Adenylosuccinate lyase C-terminal KQ257_05485 PF00206 Lyase KQ257_05500 PF01343 Peptidase family S49 KQ257_05500 PF08496 Peptidase family S49 N-terminal KQ257_05505 PF00005 ABC transporter KQ257_05510 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_05515 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_05520 PF12849 PBP superfamily domain KQ257_05525 PF00324 Amino acid permease KQ257_05530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ257_05530 PF00205 Thiamine pyrophosphate enzyme, central domain KQ257_05530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ257_05535 PF01037 Lrp/AsnC ligand binding domain KQ257_05540 PF00171 Aldehyde dehydrogenase family KQ257_05545 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ257_05550 PF00202 Aminotransferase class-III KQ257_05565 PF02525 Flavodoxin-like fold KQ257_05570 PF00487 Fatty acid desaturase KQ257_05575 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_05575 PF00970 Oxidoreductase FAD-binding domain KQ257_05575 PF00175 Oxidoreductase NAD-binding domain KQ257_05580 PF00440 Bacterial regulatory proteins, tetR family KQ257_05590 PF18339 RapA N-terminal Tudor like domain 1 KQ257_05590 PF00176 SNF2 family N-terminal domain KQ257_05590 PF18337 RapA N-terminal Tudor like domain KQ257_05590 PF00271 Helicase conserved C-terminal domain KQ257_05590 PF12137 RNA polymerase recycling family C-terminal KQ257_05595 PF00849 RNA pseudouridylate synthase KQ257_05605 PF00202 Aminotransferase class-III KQ257_05610 PF02581 Thiamine monophosphate synthase KQ257_05635 PF00675 Insulinase (Peptidase family M16) KQ257_05635 PF05193 Peptidase M16 inactive domain KQ257_05640 PF02567 Phenazine biosynthesis-like protein KQ257_05645 PF00375 Sodium:dicarboxylate symporter family KQ257_05650 PF03466 LysR substrate binding domain KQ257_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_05655 PF06779 Uncharacterised MFS-type transporter YbfB KQ257_05675 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ257_05680 PF00849 RNA pseudouridylate synthase KQ257_05685 PF03971 Monomeric isocitrate dehydrogenase KQ257_05695 PF00768 D-alanyl-D-alanine carboxypeptidase KQ257_05695 PF07943 Penicillin-binding protein 5, C-terminal domain KQ257_05700 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_05705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ257_05710 PF03441 FAD binding domain of DNA photolyase KQ257_05710 PF00875 DNA photolyase KQ257_05740 PF02350 UDP-N-acetylglucosamine 2-epimerase KQ257_05755 PF03060 Nitronate monooxygenase KQ257_05760 PF01207 Dihydrouridine synthase (Dus) KQ257_05765 PF07759 Protein of unknown function (DUF1615) KQ257_05775 PF01472 PUA domain KQ257_05775 PF00696 Amino acid kinase family KQ257_05780 PF01018 GTP1/OBG KQ257_05780 PF01926 50S ribosome-binding GTPase KQ257_05795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ257_05795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ257_05800 PF00892 EamA-like transporter family KQ257_05810 PF12344 Ultra-violet resistance protein B KQ257_05810 PF02151 UvrB/uvrC motif KQ257_05810 PF04851 Type III restriction enzyme, res subunit KQ257_05810 PF00271 Helicase conserved C-terminal domain KQ257_05810 PF17757 UvrB interaction domain KQ257_05820 PF00990 Diguanylate cyclase, GGDEF domain KQ257_05820 PF17151 Periplasmic sensor domain KQ257_05830 PF00155 Aminotransferase class I and II KQ257_05860 PF00106 short chain dehydrogenase KQ257_05865 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KQ257_05870 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KQ257_05875 PF02565 Recombination protein O C terminal KQ257_05875 PF11967 Recombination protein O N terminal KQ257_05885 PF07650 KH domain KQ257_05885 PF01926 50S ribosome-binding GTPase KQ257_05890 PF00035 Double-stranded RNA binding motif KQ257_05890 PF14622 Ribonuclease-III-like KQ257_05900 PF10502 Signal peptidase, peptidase S26 KQ257_05905 PF00679 Elongation factor G C-terminus KQ257_05905 PF00009 Elongation factor Tu GTP binding domain KQ257_05905 PF06421 GTP-binding protein LepA C-terminus KQ257_05905 PF03144 Elongation factor Tu domain 2 KQ257_05915 PF13180 PDZ domain KQ257_05920 PF00890 FAD binding domain KQ257_05920 PF02910 Fumarate reductase flavoprotein C-term KQ257_05930 PF02223 Thymidylate kinase KQ257_05935 PF02618 YceG-like family KQ257_05940 PF01063 Amino-transferase class IV KQ257_05955 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_05960 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_05965 PF00005 ABC transporter KQ257_05965 PF12857 TOBE-like domain KQ257_05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_05970 PF03466 LysR substrate binding domain KQ257_05980 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_05980 PF14602 Hexapeptide repeat of succinyl-transferase KQ257_05980 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KQ257_05990 PF06508 Queuosine biosynthesis protein QueC KQ257_06005 PF00578 AhpC/TSA family KQ257_06015 PF00293 NUDIX domain KQ257_06015 PF01467 Cytidylyltransferase-like KQ257_06020 PF00378 Enoyl-CoA hydratase/isomerase KQ257_06025 PF01784 NIF3 (NGG1p interacting factor 3) KQ257_06030 PF07690 Major Facilitator Superfamily KQ257_06035 PF02769 AIR synthase related protein, C-terminal domain KQ257_06035 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KQ257_06035 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KQ257_06040 PF01966 HD domain KQ257_06045 PF07499 RuvA, C-terminal domain KQ257_06045 PF01330 RuvA N terminal domain KQ257_06050 PF05496 Holliday junction DNA helicase RuvB P-loop domain KQ257_06050 PF17864 RuvB AAA lid domain KQ257_06050 PF05491 RuvB C-terminal winged helix domain KQ257_06055 PF01546 Peptidase family M20/M25/M40 KQ257_06055 PF07687 Peptidase dimerisation domain KQ257_06060 PF03061 Thioesterase superfamily KQ257_06065 PF01618 MotA/TolQ/ExbB proton channel family KQ257_06070 PF02472 Biopolymer transport protein ExbD/TolR KQ257_06080 PF07676 WD40-like Beta Propeller Repeat KQ257_06080 PF04052 TolB amino-terminal domain KQ257_06085 PF00691 OmpA family KQ257_06095 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KQ257_06100 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ257_06100 PF00588 SpoU rRNA Methylase family KQ257_06130 PF11638 DnaA N-terminal domain KQ257_06130 PF00308 Bacterial dnaA protein KQ257_06130 PF08299 Bacterial dnaA protein helix-turn-helix KQ257_06135 PF01594 AI-2E family transporter KQ257_06140 PF02769 AIR synthase related protein, C-terminal domain KQ257_06140 PF00586 AIR synthase related protein, N-terminal domain KQ257_06145 PF00551 Formyl transferase KQ257_06150 PF12697 Alpha/beta hydrolase family KQ257_06155 PF01343 Peptidase family S49 KQ257_06155 PF06965 Na+/H+ antiporter 1 KQ257_06165 PF00753 Metallo-beta-lactamase superfamily KQ257_06165 PF13567 Domain of unknown function (DUF4131) KQ257_06165 PF03772 Competence protein KQ257_06170 PF00005 ABC transporter KQ257_06175 PF12704 MacB-like periplasmic core domain KQ257_06175 PF02687 FtsX-like permease family KQ257_06185 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KQ257_06200 PF00266 Aminotransferase class-V KQ257_06210 PF13533 Biotin-lipoyl like KQ257_06230 PF00535 Glycosyl transferase family 2 KQ257_06245 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ257_06245 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ257_06250 PF01012 Electron transfer flavoprotein domain KQ257_06250 PF00766 Electron transfer flavoprotein FAD-binding domain KQ257_06255 PF01012 Electron transfer flavoprotein domain KQ257_06260 PF02899 Phage integrase, N-terminal SAM-like domain KQ257_06260 PF00589 Phage integrase family KQ257_06265 PF01810 LysE type translocator KQ257_06270 PF01678 Diaminopimelate epimerase KQ257_06275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KQ257_06275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KQ257_06285 PF00324 Amino acid permease KQ257_06290 PF18073 Rubredoxin metal binding domain KQ257_06300 PF00152 tRNA synthetases class II (D, K and N) KQ257_06305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ257_06305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ257_06305 PF11890 Domain of unknown function (DUF3410) KQ257_06310 PF06803 Protein of unknown function (DUF1232) KQ257_06315 PF02634 FdhD/NarQ family KQ257_06320 PF00384 Molybdopterin oxidoreductase KQ257_06325 PF02595 Glycerate kinase family KQ257_06340 PF00881 Nitroreductase family KQ257_06360 PF09857 Putative toxin of bacterial toxin-antitoxin pair KQ257_06375 PF00665 Integrase core domain KQ257_06375 PF13936 Helix-turn-helix domain KQ257_06395 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ257_06395 PF03449 Transcription elongation factor, N-terminal KQ257_06400 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ257_06400 PF01464 Transglycosylase SLT domain KQ257_06410 PF01171 PP-loop family KQ257_06415 PF01464 Transglycosylase SLT domain KQ257_06420 PF01435 Peptidase family M48 KQ257_06430 PF00873 AcrB/AcrD/AcrF family KQ257_06435 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ257_06440 PF00753 Metallo-beta-lactamase superfamily KQ257_06445 PF01219 Prokaryotic diacylglycerol kinase KQ257_06450 PF00118 TCP-1/cpn60 chaperonin family KQ257_06455 PF00166 Chaperonin 10 Kd subunit KQ257_06465 PF00149 Calcineurin-like phosphoesterase KQ257_06470 PF00781 Diacylglycerol kinase catalytic domain KQ257_06475 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KQ257_06475 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KQ257_06480 PF01266 FAD dependent oxidoreductase KQ257_06480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KQ257_06485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KQ257_06485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KQ257_06490 PF00083 Sugar (and other) transporter KQ257_06505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KQ257_06505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KQ257_06520 PF16655 PhoD-like phosphatase, N-terminal domain KQ257_06520 PF09423 PhoD-like phosphatase KQ257_06540 PF00809 Pterin binding enzyme KQ257_06545 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_06545 PF17862 AAA+ lid domain KQ257_06545 PF06480 FtsH Extracellular KQ257_06545 PF01434 Peptidase family M41 KQ257_06550 PF01728 FtsJ-like methyltransferase KQ257_06555 PF01985 CRS1 / YhbY (CRM) domain KQ257_06570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KQ257_06570 PF00117 Glutamine amidotransferase class-I KQ257_06575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ257_06575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KQ257_06575 PF02142 MGS-like domain KQ257_06580 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ257_06580 PF03449 Transcription elongation factor, N-terminal KQ257_06585 PF00440 Bacterial regulatory proteins, tetR family KQ257_06590 PF01042 Endoribonuclease L-PSP KQ257_06595 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_06600 PF00582 Universal stress protein family KQ257_06605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ257_06615 PF09587 Bacterial capsule synthesis protein PGA_cap KQ257_06630 PF00999 Sodium/hydrogen exchanger family KQ257_06635 PF04228 Putative neutral zinc metallopeptidase KQ257_06640 PF05661 Protein of unknown function (DUF808) KQ257_06645 PF00579 tRNA synthetases class I (W and Y) KQ257_06650 PF02629 CoA binding domain KQ257_06650 PF00549 CoA-ligase KQ257_06655 PF08442 ATP-grasp domain KQ257_06655 PF00549 CoA-ligase KQ257_06660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ257_06660 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_06665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ257_06665 PF00364 Biotin-requiring enzyme KQ257_06665 PF02817 e3 binding domain KQ257_06670 PF16078 2-oxoglutarate dehydrogenase N-terminus KQ257_06670 PF00676 Dehydrogenase E1 component KQ257_06670 PF16870 2-oxoglutarate dehydrogenase C-terminal KQ257_06670 PF02779 Transketolase, pyrimidine binding domain KQ257_06685 PF13085 2Fe-2S iron-sulfur cluster binding domain KQ257_06690 PF00890 FAD binding domain KQ257_06690 PF02910 Fumarate reductase flavoprotein C-term KQ257_06695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ257_06700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ257_06705 PF00285 Citrate synthase, C-terminal domain KQ257_06715 PF00581 Rhodanese-like domain KQ257_06715 PF17773 UPF0176 acylphosphatase like domain KQ257_06730 PF04545 Sigma-70, region 4 KQ257_06730 PF04539 Sigma-70 region 3 KQ257_06730 PF04542 Sigma-70 region 2 KQ257_06730 PF00140 Sigma-70 factor, region 1.2 KQ257_06730 PF03979 Sigma-70 factor, region 1.1 KQ257_06730 PF04546 Sigma-70, non-essential region KQ257_06735 PF04359 Protein of unknown function (DUF493) KQ257_06740 PF03099 Biotin/lipoate A/B protein ligase family KQ257_06750 PF00465 Iron-containing alcohol dehydrogenase KQ257_06755 PF13520 Amino acid permease KQ257_06760 PF03358 NADPH-dependent FMN reductase KQ257_06770 PF00588 SpoU rRNA Methylase family KQ257_06775 PF14824 Sirohaem biosynthesis protein central KQ257_06775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ257_06775 PF10414 Sirohaem synthase dimerisation region KQ257_06780 PF02403 Seryl-tRNA synthetase N-terminal domain KQ257_06780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ257_06790 PF03548 Outer membrane lipoprotein carrier protein LolA KQ257_06795 PF01016 Ribosomal L27 protein KQ257_06800 PF00829 Ribosomal prokaryotic L21 protein KQ257_06810 PF00348 Polyprenyl synthetase KQ257_06820 PF01569 PAP2 superfamily KQ257_06825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ257_06825 PF00529 HlyD membrane-fusion protein of T1SS KQ257_06830 PF00873 AcrB/AcrD/AcrF family KQ257_06835 PF02321 Outer membrane efflux protein KQ257_06840 PF01906 Putative heavy-metal-binding KQ257_06845 PF01906 Putative heavy-metal-binding KQ257_06865 PF08264 Anticodon-binding domain of tRNA KQ257_06865 PF00133 tRNA synthetases class I (I, L, M and V) KQ257_06865 PF10458 Valyl tRNA synthetase tRNA binding arm KQ257_06885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_06885 PF03466 LysR substrate binding domain KQ257_06890 PF00909 Ammonium Transporter Family KQ257_06900 PF00512 His Kinase A (phospho-acceptor) domain KQ257_06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_06900 PF08521 Two-component sensor kinase N-terminal KQ257_06905 PF00072 Response regulator receiver domain KQ257_06905 PF00486 Transcriptional regulatory protein, C terminal KQ257_06910 PF08019 Phosphoethanolamine transferase EptA/EptB KQ257_06910 PF00884 Sulfatase KQ257_06930 PF01734 Patatin-like phospholipase KQ257_06940 PF01145 SPFH domain / Band 7 family KQ257_06945 PF04237 YjbR KQ257_06950 PF00348 Polyprenyl synthetase KQ257_06955 PF04303 PrpF protein KQ257_06960 PF00324 Amino acid permease KQ257_06970 PF01965 DJ-1/PfpI family KQ257_06975 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_06975 PF00698 Acyl transferase domain KQ257_06975 PF16197 Ketoacyl-synthetase C-terminal extension KQ257_06975 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ257_06975 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ257_06975 PF08659 KR domain KQ257_06975 PF00550 Phosphopantetheine attachment site KQ257_06975 PF14765 Polyketide synthase dehydratase KQ257_06975 PF08990 Erythronolide synthase docking KQ257_06975 PF09277 Erythronolide synthase, docking KQ257_06980 PF06719 AraC-type transcriptional regulator N-terminus KQ257_06980 PF12833 Helix-turn-helix domain KQ257_06985 PF02673 Bacitracin resistance protein BacA KQ257_07005 PF02525 Flavodoxin-like fold KQ257_07020 PF01507 Phosphoadenosine phosphosulfate reductase family KQ257_07025 PF06974 Protein of unknown function (DUF1298) KQ257_07025 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KQ257_07035 PF00575 S1 RNA binding domain KQ257_07035 PF10150 Ribonuclease E/G family KQ257_07040 PF02545 Maf-like protein KQ257_07045 PF04093 rod shape-determining protein MreD KQ257_07050 PF04085 rod shape-determining protein MreC KQ257_07060 PF02686 Glu-tRNAGln amidotransferase C subunit KQ257_07065 PF01425 Amidase KQ257_07070 PF02637 GatB domain KQ257_07070 PF02934 GatB/GatE catalytic domain KQ257_07095 PF05992 SbmA/BacA-like family KQ257_07100 PF13291 ACT domain KQ257_07100 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_07105 PF01734 Patatin-like phospholipase KQ257_07110 PF01235 Sodium:alanine symporter family KQ257_07125 PF00881 Nitroreductase family KQ257_07130 PF07690 Major Facilitator Superfamily KQ257_07135 PF12805 FUSC-like inner membrane protein yccS KQ257_07145 PF00258 Flavodoxin KQ257_07145 PF00175 Oxidoreductase NAD-binding domain KQ257_07145 PF00667 FAD binding domain KQ257_07185 PF17969 L,D-transpeptidase C-terminal domain KQ257_07185 PF03734 L,D-transpeptidase catalytic domain KQ257_07190 PF04304 Protein of unknown function (DUF454) KQ257_07200 PF08085 Entericidin EcnA/B family KQ257_07205 PF07687 Peptidase dimerisation domain KQ257_07205 PF01546 Peptidase family M20/M25/M40 KQ257_07215 PF06969 HemN C-terminal domain KQ257_07215 PF04055 Radical SAM superfamily KQ257_07225 PF01584 CheW-like domain KQ257_07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_07225 PF01627 Hpt domain KQ257_07225 PF00072 Response regulator receiver domain KQ257_07230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KQ257_07230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KQ257_07235 PF01584 CheW-like domain KQ257_07240 PF00072 Response regulator receiver domain KQ257_07245 PF00072 Response regulator receiver domain KQ257_07260 PF00873 AcrB/AcrD/AcrF family KQ257_07265 PF04073 Aminoacyl-tRNA editing domain KQ257_07265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ257_07265 PF03129 Anticodon binding domain KQ257_07270 PF07411 Domain of unknown function (DUF1508) KQ257_07275 PF08274 PhnA Zinc-Ribbon KQ257_07275 PF03831 PhnA domain KQ257_07280 PF04343 Protein of unknown function, DUF488 KQ257_07290 PF01571 Aminomethyltransferase folate-binding domain KQ257_07295 PF13098 Thioredoxin-like domain KQ257_07295 PF10411 Disulfide bond isomerase protein N-terminus KQ257_07305 PF03547 Membrane transport protein KQ257_07310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ257_07315 PF07715 TonB-dependent Receptor Plug Domain KQ257_07315 PF00593 TonB dependent receptor KQ257_07320 PF02245 Methylpurine-DNA glycosylase (MPG) KQ257_07325 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KQ257_07325 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KQ257_07325 PF06827 Zinc finger found in FPG and IleRS KQ257_07340 PF01741 Large-conductance mechanosensitive channel, MscL KQ257_07345 PF00009 Elongation factor Tu GTP binding domain KQ257_07345 PF00679 Elongation factor G C-terminus KQ257_07345 PF03144 Elongation factor Tu domain 2 KQ257_07350 PF00860 Permease family KQ257_07355 PF05175 Methyltransferase small domain KQ257_07355 PF08468 Methyltransferase small domain N-terminal KQ257_07360 PF00324 Amino acid permease KQ257_07365 PF01139 tRNA-splicing ligase RtcB KQ257_07375 PF00691 OmpA family KQ257_07375 PF13505 Outer membrane protein beta-barrel domain KQ257_07385 PF02803 Thiolase, C-terminal domain KQ257_07385 PF00108 Thiolase, N-terminal domain KQ257_07395 PF00893 Small Multidrug Resistance protein KQ257_07405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ257_07405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ257_07410 PF01011 PQQ enzyme repeat KQ257_07415 PF04966 Carbohydrate-selective porin, OprB family KQ257_07420 PF02515 CoA-transferase family III KQ257_07425 PF02311 AraC-like ligand binding domain KQ257_07425 PF12833 Helix-turn-helix domain KQ257_07430 PF02803 Thiolase, C-terminal domain KQ257_07430 PF00108 Thiolase, N-terminal domain KQ257_07435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ257_07435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ257_07435 PF00378 Enoyl-CoA hydratase/isomerase KQ257_07450 PF13673 Acetyltransferase (GNAT) domain KQ257_07460 PF03006 Haemolysin-III related KQ257_07465 PF07690 Major Facilitator Superfamily KQ257_07465 PF00083 Sugar (and other) transporter KQ257_07475 PF07517 SecA DEAD-like domain KQ257_07475 PF02810 SEC-C motif KQ257_07475 PF07516 SecA Wing and Scaffold domain KQ257_07475 PF01043 SecA preprotein cross-linking domain KQ257_07480 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ257_07480 PF00578 AhpC/TSA family KQ257_07485 PF00753 Metallo-beta-lactamase superfamily KQ257_07500 PF02875 Mur ligase family, glutamate ligase domain KQ257_07500 PF08245 Mur ligase middle domain KQ257_07505 PF01039 Carboxyl transferase domain KQ257_07510 PF00290 Tryptophan synthase alpha chain KQ257_07535 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_07540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KQ257_07545 PF00593 TonB dependent receptor KQ257_07545 PF07715 TonB-dependent Receptor Plug Domain KQ257_07550 PF01923 Cobalamin adenosyltransferase KQ257_07570 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KQ257_07575 PF00486 Transcriptional regulatory protein, C terminal KQ257_07575 PF00072 Response regulator receiver domain KQ257_07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_07580 PF00672 HAMP domain KQ257_07580 PF00512 His Kinase A (phospho-acceptor) domain KQ257_07590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_07590 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_07590 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ257_07590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_07595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_07595 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ257_07595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_07595 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_07600 PF06146 Phosphate-starvation-inducible E KQ257_07620 PF07715 TonB-dependent Receptor Plug Domain KQ257_07620 PF00593 TonB dependent receptor KQ257_07630 PF00152 tRNA synthetases class II (D, K and N) KQ257_07630 PF02938 GAD domain KQ257_07630 PF01336 OB-fold nucleic acid binding domain KQ257_07640 PF13439 Glycosyltransferase Family 4 KQ257_07640 PF00534 Glycosyl transferases group 1 KQ257_07645 PF00535 Glycosyl transferase family 2 KQ257_07650 PF00534 Glycosyl transferases group 1 KQ257_07650 PF13439 Glycosyltransferase Family 4 KQ257_07670 PF13439 Glycosyltransferase Family 4 KQ257_07670 PF00534 Glycosyl transferases group 1 KQ257_07675 PF01522 Polysaccharide deacetylase KQ257_07685 PF01063 Amino-transferase class IV KQ257_07690 PF08335 GlnD PII-uridylyltransferase KQ257_07690 PF03710 Glutamate-ammonia ligase adenylyltransferase KQ257_07695 PF07689 KaiB domain KQ257_07695 PF00512 His Kinase A (phospho-acceptor) domain KQ257_07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_07705 PF02547 Queuosine biosynthesis protein KQ257_07720 PF01702 Queuine tRNA-ribosyltransferase KQ257_07725 PF02699 Preprotein translocase subunit KQ257_07730 PF07549 SecD/SecF GG Motif KQ257_07730 PF13721 SecD export protein N-terminal TM region KQ257_07730 PF02355 Protein export membrane protein KQ257_07735 PF02355 Protein export membrane protein KQ257_07735 PF07549 SecD/SecF GG Motif KQ257_07740 PF02441 Flavoprotein KQ257_07740 PF04127 DNA / pantothenate metabolism flavoprotein KQ257_07745 PF04002 RadC-like JAB domain KQ257_07750 PF01062 Bestrophin, RFP-TM, chloride channel KQ257_07755 PF02811 PHP domain KQ257_07760 PF04279 Intracellular septation protein A KQ257_07765 PF03795 YCII-related domain KQ257_07775 PF01266 FAD dependent oxidoreductase KQ257_07775 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KQ257_07785 PF04461 Protein of unknown function (DUF520) KQ257_07795 PF03061 Thioesterase superfamily KQ257_07800 PF00085 Thioredoxin KQ257_07805 PF00561 alpha/beta hydrolase fold KQ257_07810 PF00753 Metallo-beta-lactamase superfamily KQ257_07810 PF04273 Putative phosphatase (DUF442) KQ257_07820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ257_07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_07860 PF13340 Putative transposase of IS4/5 family (DUF4096) KQ257_07870 PF01389 OmpA-like transmembrane domain KQ257_07870 PF00691 OmpA family KQ257_07875 PF00149 Calcineurin-like phosphoesterase KQ257_07875 PF10518 TAT (twin-arginine translocation) pathway signal sequence KQ257_07880 PF13091 PLD-like domain KQ257_07890 PF16360 GTP-binding GTPase Middle Region KQ257_07890 PF01926 50S ribosome-binding GTPase KQ257_07890 PF13167 GTP-binding GTPase N-terminal KQ257_07910 PF00149 Calcineurin-like phosphoesterase KQ257_07915 PF00398 Ribosomal RNA adenine dimethylase KQ257_07920 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KQ257_07925 PF00572 Ribosomal protein L13 KQ257_07930 PF00380 Ribosomal protein S9/S16 KQ257_07935 PF00043 Glutathione S-transferase, C-terminal domain KQ257_07935 PF13417 Glutathione S-transferase, N-terminal domain KQ257_07940 PF04386 Stringent starvation protein B KQ257_07950 PF02785 Biotin carboxylase C-terminal domain KQ257_07950 PF00289 Biotin carboxylase, N-terminal domain KQ257_07950 PF00364 Biotin-requiring enzyme KQ257_07950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ257_07955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ257_07955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ257_07955 PF00378 Enoyl-CoA hydratase/isomerase KQ257_07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_07960 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_07965 PF01039 Carboxyl transferase domain KQ257_07980 PF17932 Tetracyclin repressor-like, C-terminal domain KQ257_07980 PF00440 Bacterial regulatory proteins, tetR family KQ257_07985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_07985 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_07985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_08030 PF01066 CDP-alcohol phosphatidyltransferase KQ257_08035 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KQ257_08055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KQ257_08055 PF00056 lactate/malate dehydrogenase, NAD binding domain KQ257_08065 PF01551 Peptidase family M23 KQ257_08065 PF01464 Transglycosylase SLT domain KQ257_08065 PF10145 Phage-related minor tail protein KQ257_08070 PF01938 TRAM domain KQ257_08070 PF00919 Uncharacterized protein family UPF0004 KQ257_08070 PF04055 Radical SAM superfamily KQ257_08075 PF02562 PhoH-like protein KQ257_08080 PF02130 Uncharacterized protein family UPF0054 KQ257_08105 PF03358 NADPH-dependent FMN reductase KQ257_08110 PF03631 Virulence factor BrkB KQ257_08115 PF00892 EamA-like transporter family KQ257_08120 PF12833 Helix-turn-helix domain KQ257_08125 PF01557 Fumarylacetoacetate (FAA) hydrolase family KQ257_08170 PF00773 RNB domain KQ257_08170 PF00575 S1 RNA binding domain KQ257_08170 PF17876 Cold shock domain KQ257_08170 PF08461 Ribonuclease R winged-helix domain KQ257_08170 PF08206 Ribonuclease B OB domain KQ257_08175 PF01432 Peptidase family M3 KQ257_08180 PF09526 Probable metal-binding protein (DUF2387) KQ257_08210 PF03937 Flavinator of succinate dehydrogenase KQ257_08215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_08215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_08215 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_08220 PF00743 Flavin-binding monooxygenase-like KQ257_08225 PF01196 Ribosomal protein L17 KQ257_08230 PF01000 RNA polymerase Rpb3/RpoA insert domain KQ257_08230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KQ257_08230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KQ257_08235 PF00163 Ribosomal protein S4/S9 N-terminal domain KQ257_08235 PF01479 S4 domain KQ257_08240 PF00411 Ribosomal protein S11 KQ257_08245 PF00416 Ribosomal protein S13/S18 KQ257_08250 PF00444 Ribosomal protein L36 KQ257_08255 PF00344 SecY translocase KQ257_08260 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KQ257_08265 PF00327 Ribosomal protein L30p/L7e KQ257_08270 PF03719 Ribosomal protein S5, C-terminal domain KQ257_08270 PF00333 Ribosomal protein S5, N-terminal domain KQ257_08275 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KQ257_08280 PF00347 Ribosomal protein L6 KQ257_08285 PF00410 Ribosomal protein S8 KQ257_08290 PF00253 Ribosomal protein S14p/S29e KQ257_08295 PF00673 ribosomal L5P family C-terminus KQ257_08295 PF00281 Ribosomal protein L5 KQ257_08300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KQ257_08300 PF00467 KOW motif KQ257_08305 PF00238 Ribosomal protein L14p/L23e KQ257_08310 PF00366 Ribosomal protein S17 KQ257_08315 PF00831 Ribosomal L29 protein KQ257_08320 PF00252 Ribosomal protein L16p/L10e KQ257_08325 PF07650 KH domain KQ257_08325 PF00189 Ribosomal protein S3, C-terminal domain KQ257_08330 PF00237 Ribosomal protein L22p/L17e KQ257_08335 PF00203 Ribosomal protein S19 KQ257_08340 PF03947 Ribosomal Proteins L2, C-terminal domain KQ257_08340 PF00181 Ribosomal Proteins L2, RNA binding domain KQ257_08345 PF00276 Ribosomal protein L23 KQ257_08350 PF00573 Ribosomal protein L4/L1 family KQ257_08355 PF00297 Ribosomal protein L3 KQ257_08360 PF00338 Ribosomal protein S10p/S20e KQ257_08365 PF00117 Glutamine amidotransferase class-I KQ257_08370 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ257_08375 PF05872 Bacterial protein of unknown function (DUF853) KQ257_08380 PF00175 Oxidoreductase NAD-binding domain KQ257_08380 PF00042 Globin KQ257_08380 PF00970 Oxidoreductase FAD-binding domain KQ257_08385 PF02082 Transcriptional regulator KQ257_08390 PF01926 50S ribosome-binding GTPase KQ257_08400 PF00375 Sodium:dicarboxylate symporter family KQ257_08410 PF01553 Acyltransferase KQ257_08425 PF00271 Helicase conserved C-terminal domain KQ257_08425 PF17191 RecG wedge domain KQ257_08425 PF00270 DEAD/DEAH box helicase KQ257_08430 PF00156 Phosphoribosyl transferase domain KQ257_08435 PF00293 NUDIX domain KQ257_08440 PF03641 Possible lysine decarboxylase KQ257_08445 PF01544 CorA-like Mg2+ transporter protein KQ257_08455 PF05494 MlaC protein KQ257_08465 PF02405 Permease MlaE KQ257_08470 PF00005 ABC transporter KQ257_08480 PF03880 DbpA RNA binding domain KQ257_08480 PF00270 DEAD/DEAH box helicase KQ257_08480 PF12343 Cold shock protein DEAD box A KQ257_08480 PF00271 Helicase conserved C-terminal domain KQ257_08485 PF00459 Inositol monophosphatase family KQ257_08490 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KQ257_08490 PF02779 Transketolase, pyrimidine binding domain KQ257_08490 PF02780 Transketolase, C-terminal domain KQ257_08495 PF00925 GTP cyclohydrolase II KQ257_08500 PF01218 Coproporphyrinogen III oxidase KQ257_08505 PF08501 Shikimate dehydrogenase substrate binding domain KQ257_08505 PF01488 Shikimate / quinate 5-dehydrogenase KQ257_08505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KQ257_08515 PF13340 Putative transposase of IS4/5 family (DUF4096) KQ257_08525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_08525 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_08525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_08525 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ257_08535 PF04024 PspC domain KQ257_08540 PF00571 CBS domain KQ257_08565 PF02091 Glycyl-tRNA synthetase alpha subunit KQ257_08570 PF02092 Glycyl-tRNA synthetase beta subunit KQ257_08570 PF05746 DALR anticodon binding domain KQ257_08585 PF00892 EamA-like transporter family KQ257_08590 PF03466 LysR substrate binding domain KQ257_08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_08605 PF05922 Peptidase inhibitor I9 KQ257_08605 PF00082 Subtilase family KQ257_08620 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KQ257_08625 PF04996 Succinylarginine dihydrolase KQ257_08630 PF00171 Aldehyde dehydrogenase family KQ257_08635 PF04958 Arginine N-succinyltransferase beta subunit KQ257_08640 PF00202 Aminotransferase class-III KQ257_08645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ257_08645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ257_08650 PF00324 Amino acid permease KQ257_08660 PF08241 Methyltransferase domain KQ257_08680 PF13614 AAA domain KQ257_08685 PF01594 AI-2E family transporter KQ257_08690 PF00080 Copper/zinc superoxide dismutase (SODC) KQ257_08695 PF12805 FUSC-like inner membrane protein yccS KQ257_08700 PF07690 Major Facilitator Superfamily KQ257_08710 PF02525 Flavodoxin-like fold KQ257_08715 PF03992 Antibiotic biosynthesis monooxygenase KQ257_08725 PF02913 FAD linked oxidases, C-terminal domain KQ257_08725 PF01565 FAD binding domain KQ257_08730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ257_08730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ257_08735 PF00892 EamA-like transporter family KQ257_08740 PF00892 EamA-like transporter family KQ257_08750 PF01925 Sulfite exporter TauE/SafE KQ257_08755 PF09157 Pseudouridine synthase II TruB, C-terminal KQ257_08755 PF16198 tRNA pseudouridylate synthase B C-terminal domain KQ257_08755 PF01509 TruB family pseudouridylate synthase (N terminal domain) KQ257_08760 PF03280 Proteobacterial lipase chaperone protein KQ257_08765 PF00561 alpha/beta hydrolase fold KQ257_08770 PF01245 Ribosomal protein L19 KQ257_08775 PF01746 tRNA (Guanine-1)-methyltransferase KQ257_08780 PF05239 PRC-barrel domain KQ257_08780 PF01782 RimM N-terminal domain KQ257_08785 PF00886 Ribosomal protein S16 KQ257_08825 PF02401 LytB protein KQ257_08830 PF00625 Guanylate kinase KQ257_08835 PF01192 RNA polymerase Rpb6 KQ257_08845 PF04607 Region found in RelA / SpoT proteins KQ257_08845 PF13291 ACT domain KQ257_08845 PF02824 TGS domain KQ257_08850 PF01042 Endoribonuclease L-PSP KQ257_08855 PF04324 BFD-like [2Fe-2S] binding domain KQ257_08860 PF00210 Ferritin-like domain KQ257_08865 PF15864 Protein glycosylation ligase KQ257_08865 PF04932 O-Antigen ligase KQ257_08865 PF11846 Virulence factor membrane-bound polymerase, C-terminal KQ257_08880 PF07963 Prokaryotic N-terminal methylation motif KQ257_08880 PF00114 Pilin (bacterial filament) KQ257_08890 PF04536 TPM domain KQ257_08895 PF04011 LemA family KQ257_08905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_08905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ257_08910 PF00310 Glutamine amidotransferases class-II KQ257_08910 PF04898 Glutamate synthase central domain KQ257_08910 PF01645 Conserved region in glutamate synthase KQ257_08910 PF01493 GXGXG motif KQ257_08920 PF01761 3-dehydroquinate synthase KQ257_08925 PF01202 Shikimate kinase KQ257_08930 PF00263 Bacterial type II and III secretion system protein KQ257_08930 PF03958 Bacterial type II/III secretion system short domain KQ257_08930 PF07660 Secretin and TonB N terminus short domain KQ257_08930 PF11741 AMIN domain KQ257_08940 PF04350 Pilus assembly protein, PilO KQ257_08945 PF05137 Fimbrial assembly protein (PilN) KQ257_08950 PF11104 Type IV pilus assembly protein PilM; KQ257_08955 PF00905 Penicillin binding protein transpeptidase domain KQ257_08955 PF17092 Penicillin-binding protein OB-like domain KQ257_08955 PF00912 Transglycosylase KQ257_08960 PF13847 Methyltransferase domain KQ257_08970 PF00953 Glycosyl transferase family 4 KQ257_08975 PF01225 Mur ligase family, catalytic domain KQ257_08975 PF02875 Mur ligase family, glutamate ligase domain KQ257_08975 PF08245 Mur ligase middle domain KQ257_08980 PF02875 Mur ligase family, glutamate ligase domain KQ257_08980 PF08245 Mur ligase middle domain KQ257_08980 PF01225 Mur ligase family, catalytic domain KQ257_08985 PF03717 Penicillin-binding Protein dimerisation domain KQ257_08985 PF00905 Penicillin binding protein transpeptidase domain KQ257_08995 PF01795 MraW methylase family KQ257_09010 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ257_09025 PF00324 Amino acid permease KQ257_09055 PF01545 Cation efflux family KQ257_09060 PF00873 AcrB/AcrD/AcrF family KQ257_09065 PF00529 HlyD membrane-fusion protein of T1SS KQ257_09065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ257_09085 PF04191 Phospholipid methyltransferase KQ257_09110 PF12848 ABC transporter KQ257_09110 PF00005 ABC transporter KQ257_09115 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ257_09120 PF00106 short chain dehydrogenase KQ257_09125 PF00916 Sulfate permease family KQ257_09125 PF01740 STAS domain KQ257_09130 PF09371 Tex-like protein N-terminal domain KQ257_09130 PF16921 Tex protein YqgF-like domain KQ257_09130 PF00575 S1 RNA binding domain KQ257_09130 PF17674 HHH domain KQ257_09135 PF00072 Response regulator receiver domain KQ257_09135 PF00486 Transcriptional regulatory protein, C terminal KQ257_09140 PF00672 HAMP domain KQ257_09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_09140 PF00512 His Kinase A (phospho-acceptor) domain KQ257_09150 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KQ257_09150 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KQ257_09155 PF00583 Acetyltransferase (GNAT) family KQ257_09175 PF00475 Imidazoleglycerol-phosphate dehydratase KQ257_09180 PF00117 Glutamine amidotransferase class-I KQ257_09195 PF00977 Histidine biosynthesis protein KQ257_09200 PF00664 ABC transporter transmembrane region KQ257_09200 PF00005 ABC transporter KQ257_09215 PF03992 Antibiotic biosynthesis monooxygenase KQ257_09230 PF01636 Phosphotransferase enzyme family KQ257_09235 PF00977 Histidine biosynthesis protein KQ257_09250 PF00230 Major intrinsic protein KQ257_09280 PF02705 K+ potassium transporter KQ257_09305 PF02525 Flavodoxin-like fold KQ257_09310 PF01638 HxlR-like helix-turn-helix KQ257_09350 PF00248 Aldo/keto reductase family KQ257_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_09370 PF03466 LysR substrate binding domain KQ257_09375 PF07690 Major Facilitator Superfamily KQ257_09395 PF01593 Flavin containing amine oxidoreductase KQ257_09400 PF02678 Pirin KQ257_09400 PF05726 Pirin C-terminal cupin domain KQ257_09405 PF00857 Isochorismatase family KQ257_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_09415 PF00171 Aldehyde dehydrogenase family KQ257_09420 PF00202 Aminotransferase class-III KQ257_09425 PF00392 Bacterial regulatory proteins, gntR family KQ257_09425 PF00155 Aminotransferase class I and II KQ257_09430 PF00324 Amino acid permease KQ257_09440 PF03591 AzlC protein KQ257_09450 PF00436 Single-strand binding protein family KQ257_09455 PF07690 Major Facilitator Superfamily KQ257_09465 PF03070 TENA/THI-4/PQQC family KQ257_09465 PF08543 Phosphomethylpyrimidine kinase KQ257_09465 PF02581 Thiamine monophosphate synthase KQ257_09470 PF06942 GlpM protein KQ257_09480 PF00107 Zinc-binding dehydrogenase KQ257_09480 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_09485 PF16925 Tetracyclin repressor-like, C-terminal domain KQ257_09485 PF00440 Bacterial regulatory proteins, tetR family KQ257_09490 PF17755 UvrA DNA-binding domain KQ257_09490 PF17760 UvrA interaction domain KQ257_09490 PF00005 ABC transporter KQ257_09495 PF00990 Diguanylate cyclase, GGDEF domain KQ257_09505 PF02028 BCCT, betaine/carnitine/choline family transporter KQ257_09515 PF00474 Sodium:solute symporter family KQ257_09520 PF04341 Protein of unknown function, DUF485 KQ257_09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_09525 PF01627 Hpt domain KQ257_09525 PF00512 His Kinase A (phospho-acceptor) domain KQ257_09525 PF00672 HAMP domain KQ257_09525 PF00072 Response regulator receiver domain KQ257_09535 PF00072 Response regulator receiver domain KQ257_09535 PF00196 Bacterial regulatory proteins, luxR family KQ257_09540 PF03358 NADPH-dependent FMN reductase KQ257_09545 PF00296 Luciferase-like monooxygenase KQ257_09550 PF01037 Lrp/AsnC ligand binding domain KQ257_09555 PF00857 Isochorismatase family KQ257_09560 PF00501 AMP-binding enzyme KQ257_09560 PF16177 Acetyl-coenzyme A synthetase N-terminus KQ257_09560 PF13193 AMP-binding enzyme C-terminal domain KQ257_09570 PF13936 Helix-turn-helix domain KQ257_09570 PF00665 Integrase core domain KQ257_09580 PF00924 Mechanosensitive ion channel KQ257_09585 PF04452 RNA methyltransferase KQ257_09590 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KQ257_09595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ257_09615 PF17768 RecJ OB domain KQ257_09615 PF02272 DHHA1 domain KQ257_09615 PF01368 DHH family KQ257_09620 PF01243 Pyridoxamine 5'-phosphate oxidase KQ257_09620 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KQ257_09625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ257_09625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ257_09625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ257_09625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ257_09630 PF00478 IMP dehydrogenase / GMP reductase domain KQ257_09630 PF00571 CBS domain KQ257_09635 PF03692 Putative zinc- or iron-chelating domain KQ257_09640 PF01613 Flavin reductase like domain KQ257_09640 PF00258 Flavodoxin KQ257_09645 PF07715 TonB-dependent Receptor Plug Domain KQ257_09645 PF00593 TonB dependent receptor KQ257_09650 PF01169 Uncharacterized protein family UPF0016 KQ257_09660 PF02817 e3 binding domain KQ257_09660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ257_09660 PF00364 Biotin-requiring enzyme KQ257_09665 PF17831 Pyruvate dehydrogenase E1 component middle domain KQ257_09665 PF00456 Transketolase, thiamine diphosphate binding domain KQ257_09670 PF01551 Peptidase family M23 KQ257_09680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KQ257_09685 PF12327 FtsZ family, C-terminal domain KQ257_09685 PF00091 Tubulin/FtsZ family, GTPase domain KQ257_09690 PF02491 SHS2 domain inserted in FTSA KQ257_09695 PF08478 POTRA domain, FtsQ-type KQ257_09695 PF03799 Cell division protein FtsQ KQ257_09700 PF01820 D-ala D-ala ligase N-terminus KQ257_09700 PF07478 D-ala D-ala ligase C-terminus KQ257_09705 PF01225 Mur ligase family, catalytic domain KQ257_09705 PF02875 Mur ligase family, glutamate ligase domain KQ257_09705 PF08245 Mur ligase middle domain KQ257_09710 PF03033 Glycosyltransferase family 28 N-terminal domain KQ257_09710 PF04101 Glycosyltransferase family 28 C-terminal domain KQ257_09715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KQ257_09715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KQ257_09725 PF07715 TonB-dependent Receptor Plug Domain KQ257_09725 PF00593 TonB dependent receptor KQ257_09730 PF00156 Phosphoribosyl transferase domain KQ257_09735 PF03372 Endonuclease/Exonuclease/phosphatase family KQ257_09740 PF03960 ArsC family KQ257_09750 PF07859 alpha/beta hydrolase fold KQ257_09755 PF07694 5TMR of 5TMR-LYT KQ257_09755 PF00990 Diguanylate cyclase, GGDEF domain KQ257_09760 PF11412 Disulphide bond corrector protein DsbC KQ257_09760 PF02683 Cytochrome C biogenesis protein transmembrane region KQ257_09790 PF00576 HIUase/Transthyretin family KQ257_09795 PF00860 Permease family KQ257_09805 PF01494 FAD binding domain KQ257_09810 PF03561 Allantoicase repeat KQ257_09815 PF04115 Ureidoglycolate lyase KQ257_09820 PF00106 short chain dehydrogenase KQ257_09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_09825 PF01751 Toprim domain KQ257_09825 PF00204 DNA gyrase B KQ257_09825 PF00986 DNA gyrase B subunit, carboxyl terminus KQ257_09830 PF05728 Uncharacterised protein family (UPF0227) KQ257_09845 PF02216 B domain KQ257_09845 PF00746 LPXTG cell wall anchor motif KQ257_09845 PF01476 LysM domain KQ257_09845 PF03373 Octapeptide repeat KQ257_09845 PF04650 YSIRK type signal peptide KQ257_09855 PF13296 Putative type VI secretion system Rhs element Vgr KQ257_09855 PF04717 Type VI secretion system, phage-baseplate injector KQ257_09855 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ257_09860 PF02600 Disulfide bond formation protein DsbB KQ257_09865 PF04262 Glutamate-cysteine ligase KQ257_09880 PF04286 Protein of unknown function (DUF445) KQ257_09885 PF00155 Aminotransferase class I and II KQ257_09890 PF01554 MatE KQ257_09895 PF00106 short chain dehydrogenase KQ257_09905 PF00486 Transcriptional regulatory protein, C terminal KQ257_09905 PF00072 Response regulator receiver domain KQ257_09910 PF00989 PAS fold KQ257_09910 PF11808 Phosphate regulon sensor protein PhoR KQ257_09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_09910 PF00512 His Kinase A (phospho-acceptor) domain KQ257_09920 PF01547 Bacterial extracellular solute-binding protein KQ257_09925 PF03069 Acetamidase/Formamidase family KQ257_09930 PF02666 Phosphatidylserine decarboxylase KQ257_09935 PF00581 Rhodanese-like domain KQ257_09940 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ257_09940 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KQ257_09950 PF00199 Catalase KQ257_09950 PF06628 Catalase-related immune-responsive KQ257_09955 PF02580 D-Tyr-tRNA(Tyr) deacylase KQ257_09980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ257_09980 PF00925 GTP cyclohydrolase II KQ257_09985 PF00885 6,7-dimethyl-8-ribityllumazine synthase KQ257_09990 PF01029 NusB family KQ257_09995 PF02769 AIR synthase related protein, C-terminal domain KQ257_09995 PF00586 AIR synthase related protein, N-terminal domain KQ257_10000 PF04608 Phosphatidylglycerophosphatase A KQ257_10005 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_10005 PF14602 Hexapeptide repeat of succinyl-transferase KQ257_10005 PF12804 MobA-like NTP transferase domain KQ257_10010 PF01380 SIS domain KQ257_10015 PF01177 Asp/Glu/Hydantoin racemase KQ257_10030 PF00491 Arginase family KQ257_10035 PF01979 Amidohydrolase family KQ257_10040 PF00324 Amino acid permease KQ257_10045 PF00221 Aromatic amino acid lyase KQ257_10050 PF17391 Urocanase N-terminal domain KQ257_10050 PF01175 Urocanase Rossmann-like domain KQ257_10050 PF17392 Urocanase C-terminal domain KQ257_10055 PF05962 HutD KQ257_10060 PF00392 Bacterial regulatory proteins, gntR family KQ257_10060 PF07702 UTRA domain KQ257_10070 PF13340 Putative transposase of IS4/5 family (DUF4096) KQ257_10075 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ257_10075 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ257_10085 PF00324 Amino acid permease KQ257_10095 PF02798 Glutathione S-transferase, N-terminal domain KQ257_10095 PF14497 Glutathione S-transferase, C-terminal domain KQ257_10100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ257_10110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ257_10115 PF04463 Protein of unknown function (DUF523) KQ257_10120 PF01554 MatE KQ257_10125 PF01758 Sodium Bile acid symporter family KQ257_10130 PF00857 Isochorismatase family KQ257_10135 PF00701 Dihydrodipicolinate synthetase family KQ257_10145 PF01259 SAICAR synthetase KQ257_10155 PF01226 Formate/nitrite transporter KQ257_10160 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_10160 PF12002 MgsA AAA+ ATPase C terminal KQ257_10160 PF16193 AAA C-terminal domain KQ257_10165 PF07995 Glucose / Sorbosone dehydrogenase KQ257_10170 PF03692 Putative zinc- or iron-chelating domain KQ257_10175 PF07043 Protein of unknown function (DUF1328) KQ257_10180 PF02230 Phospholipase/Carboxylesterase KQ257_10190 PF14815 NUDIX domain KQ257_10190 PF00633 Helix-hairpin-helix motif KQ257_10190 PF10576 Iron-sulfur binding domain of endonuclease III KQ257_10190 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ257_10205 PF03352 Methyladenine glycosylase KQ257_10210 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_10210 PF00107 Zinc-binding dehydrogenase KQ257_10215 PF00155 Aminotransferase class I and II KQ257_10215 PF00392 Bacterial regulatory proteins, gntR family KQ257_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_10230 PF03466 LysR substrate binding domain KQ257_10235 PF00248 Aldo/keto reductase family KQ257_10240 PF07690 Major Facilitator Superfamily KQ257_10250 PF05173 Dihydrodipicolinate reductase, C-terminus KQ257_10250 PF01113 Dihydrodipicolinate reductase, N-terminus KQ257_10260 PF00226 DnaJ domain KQ257_10260 PF01556 DnaJ C terminal domain KQ257_10260 PF00684 DnaJ central domain KQ257_10270 PF00873 AcrB/AcrD/AcrF family KQ257_10275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ257_10280 PF08361 MAATS-type transcriptional repressor, C-terminal region KQ257_10280 PF00440 Bacterial regulatory proteins, tetR family KQ257_10285 PF00311 Phosphoenolpyruvate carboxylase KQ257_10290 PF00860 Permease family KQ257_10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_10295 PF03466 LysR substrate binding domain KQ257_10310 PF00920 Dehydratase family KQ257_10315 PF02911 Formyl transferase, C-terminal domain KQ257_10315 PF00551 Formyl transferase KQ257_10320 PF01189 16S rRNA methyltransferase RsmB/F KQ257_10320 PF01029 NusB family KQ257_10330 PF00209 Sodium:neurotransmitter symporter family KQ257_10370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ257_10375 PF07859 alpha/beta hydrolase fold KQ257_10400 PF01025 GrpE KQ257_10405 PF00012 Hsp70 protein KQ257_10425 PF13406 Transglycosylase SLT domain KQ257_10430 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KQ257_10430 PF02222 ATP-grasp domain KQ257_10435 PF00731 AIR carboxylase KQ257_10445 PF08245 Mur ligase middle domain KQ257_10445 PF02875 Mur ligase family, glutamate ligase domain KQ257_10445 PF01225 Mur ligase family, catalytic domain KQ257_10455 PF01569 PAP2 superfamily KQ257_10460 PF03741 Integral membrane protein TerC family KQ257_10470 PF03738 Glutathionylspermidine synthase preATP-grasp KQ257_10475 PF00355 Rieske [2Fe-2S] domain KQ257_10480 PF01979 Amidohydrolase family KQ257_10485 PF00156 Phosphoribosyl transferase domain KQ257_10495 PF10411 Disulfide bond isomerase protein N-terminus KQ257_10495 PF13098 Thioredoxin-like domain KQ257_10500 PF01545 Cation efflux family KQ257_10500 PF16916 Dimerisation domain of Zinc Transporter KQ257_10505 PF02583 Metal-sensitive transcriptional repressor KQ257_10510 PF00436 Single-strand binding protein family KQ257_10560 PF13356 Arm DNA-binding domain KQ257_10560 PF14659 Phage integrase, N-terminal SAM-like domain KQ257_10560 PF00589 Phage integrase family KQ257_10565 PF01926 50S ribosome-binding GTPase KQ257_10565 PF12631 MnmE helical domain KQ257_10565 PF10396 GTP-binding protein TrmE N-terminus KQ257_10570 PF14849 YidC periplasmic domain KQ257_10570 PF02096 60Kd inner membrane protein KQ257_10575 PF01809 Putative membrane protein insertion efficiency factor KQ257_10580 PF00825 Ribonuclease P KQ257_10585 PF00468 Ribosomal protein L34 KQ257_10590 PF11638 DnaA N-terminal domain KQ257_10590 PF08299 Bacterial dnaA protein helix-turn-helix KQ257_10590 PF00308 Bacterial dnaA protein KQ257_10595 PF02767 DNA polymerase III beta subunit, central domain KQ257_10595 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ257_10595 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ257_10600 PF02463 RecF/RecN/SMC N terminal domain KQ257_10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_10605 PF01751 Toprim domain KQ257_10605 PF00986 DNA gyrase B subunit, carboxyl terminus KQ257_10605 PF00204 DNA gyrase B KQ257_10605 PF18053 DNA gyrase B subunit insert domain KQ257_10615 PF09335 SNARE associated Golgi protein KQ257_10620 PF00005 ABC transporter KQ257_10620 PF12848 ABC transporter KQ257_10640 PF01521 Iron-sulphur cluster biosynthesis KQ257_10645 PF00561 alpha/beta hydrolase fold KQ257_10650 PF03702 Anhydro-N-acetylmuramic acid kinase KQ257_10655 PF00579 tRNA synthetases class I (W and Y) KQ257_10695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ257_10700 PF01252 Signal peptidase (SPase) II KQ257_10705 PF00133 tRNA synthetases class I (I, L, M and V) KQ257_10705 PF08264 Anticodon-binding domain of tRNA KQ257_10705 PF06827 Zinc finger found in FPG and IleRS KQ257_10710 PF06574 FAD synthetase KQ257_10710 PF01687 Riboflavin kinase KQ257_10720 PF01048 Phosphorylase superfamily KQ257_10725 PF08362 YcdC-like protein, C-terminal region KQ257_10725 PF00440 Bacterial regulatory proteins, tetR family KQ257_10730 PF00005 ABC transporter KQ257_10735 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_10740 PF00296 Luciferase-like monooxygenase KQ257_10745 PF09084 NMT1/THI5 like KQ257_10750 PF09084 NMT1/THI5 like KQ257_10755 PF00583 Acetyltransferase (GNAT) family KQ257_10755 PF00696 Amino acid kinase family KQ257_10770 PF00106 short chain dehydrogenase KQ257_10775 PF13419 Haloacid dehalogenase-like hydrolase KQ257_10785 PF01323 DSBA-like thioredoxin domain KQ257_10790 PF08360 QacR-like protein, C-terminal region KQ257_10790 PF00440 Bacterial regulatory proteins, tetR family KQ257_10795 PF00440 Bacterial regulatory proteins, tetR family KQ257_10800 PF00175 Oxidoreductase NAD-binding domain KQ257_10805 PF00487 Fatty acid desaturase KQ257_10810 PF01138 3' exoribonuclease family, domain 1 KQ257_10810 PF03725 3' exoribonuclease family, domain 2 KQ257_10815 PF05506 Domain of unknown function (DUF756) KQ257_10815 PF04185 Phosphoesterase family KQ257_10825 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KQ257_10825 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KQ257_10830 PF01510 N-acetylmuramoyl-L-alanine amidase KQ257_10835 PF03023 Lipid II flippase MurJ KQ257_10840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ257_10840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ257_10845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ257_10845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ257_10850 PF13614 AAA domain KQ257_10850 PF02706 Chain length determinant protein KQ257_10850 PF13807 G-rich domain on putative tyrosine kinase KQ257_10855 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ257_10860 PF10531 SLBB domain KQ257_10860 PF02563 Polysaccharide biosynthesis/export protein KQ257_10860 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KQ257_10865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ257_10865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ257_10865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ257_10870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KQ257_10870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KQ257_10875 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_10880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KQ257_10890 PF12464 Maltose acetyltransferase KQ257_10890 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_10890 PF14602 Hexapeptide repeat of succinyl-transferase KQ257_10895 PF13439 Glycosyltransferase Family 4 KQ257_10895 PF00534 Glycosyl transferases group 1 KQ257_10910 PF00534 Glycosyl transferases group 1 KQ257_10915 PF00535 Glycosyl transferase family 2 KQ257_10920 PF02397 Bacterial sugar transferase KQ257_10925 PF00483 Nucleotidyl transferase KQ257_10930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ257_10930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ257_10930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ257_10935 PF00342 Phosphoglucose isomerase KQ257_10940 PF16363 GDP-mannose 4,6 dehydratase KQ257_10950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ257_10950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ257_10950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ257_10950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ257_10955 PF02652 L-lactate permease KQ257_10960 PF07729 FCD domain KQ257_10960 PF00392 Bacterial regulatory proteins, gntR family KQ257_10965 PF01070 FMN-dependent dehydrogenase KQ257_10970 PF09330 D-lactate dehydrogenase, membrane binding KQ257_10970 PF01565 FAD binding domain KQ257_10975 PF00155 Aminotransferase class I and II KQ257_10985 PF07729 FCD domain KQ257_10985 PF00392 Bacterial regulatory proteins, gntR family KQ257_10995 PF00285 Citrate synthase, C-terminal domain KQ257_11000 PF00330 Aconitase family (aconitate hydratase) KQ257_11000 PF00694 Aconitase C-terminal domain KQ257_11020 PF00293 NUDIX domain KQ257_11040 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ257_11040 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ257_11055 PF00849 RNA pseudouridylate synthase KQ257_11070 PF07715 TonB-dependent Receptor Plug Domain KQ257_11070 PF00593 TonB dependent receptor KQ257_11080 PF01037 Lrp/AsnC ligand binding domain KQ257_11085 PF01266 FAD dependent oxidoreductase KQ257_11090 PF00842 Alanine racemase, C-terminal domain KQ257_11090 PF01168 Alanine racemase, N-terminal domain KQ257_11095 PF01042 Endoribonuclease L-PSP KQ257_11100 PF00324 Amino acid permease KQ257_11105 PF00324 Amino acid permease KQ257_11115 PF00171 Aldehyde dehydrogenase family KQ257_11120 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ257_11120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ257_11125 PF13193 AMP-binding enzyme C-terminal domain KQ257_11125 PF00501 AMP-binding enzyme KQ257_11130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_11130 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_11130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_11135 PF00378 Enoyl-CoA hydratase/isomerase KQ257_11140 PF00378 Enoyl-CoA hydratase/isomerase KQ257_11145 PF00083 Sugar (and other) transporter KQ257_11145 PF07690 Major Facilitator Superfamily KQ257_11150 PF00765 Autoinducer synthase KQ257_11160 PF03472 Autoinducer binding domain KQ257_11160 PF00196 Bacterial regulatory proteins, luxR family KQ257_11165 PF00501 AMP-binding enzyme KQ257_11170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_11170 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_11170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_11175 PF00550 Phosphopantetheine attachment site KQ257_11175 PF00975 Thioesterase domain KQ257_11175 PF16197 Ketoacyl-synthetase C-terminal extension KQ257_11175 PF14765 Polyketide synthase dehydratase KQ257_11175 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ257_11175 PF08242 Methyltransferase domain KQ257_11175 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ257_11180 PF00501 AMP-binding enzyme KQ257_11180 PF13193 AMP-binding enzyme C-terminal domain KQ257_11180 PF00668 Condensation domain KQ257_11180 PF00550 Phosphopantetheine attachment site KQ257_11180 PF00975 Thioesterase domain KQ257_11195 PF16363 GDP-mannose 4,6 dehydratase KQ257_11200 PF01648 4'-phosphopantetheinyl transferase superfamily KQ257_11215 PF01722 BolA-like protein KQ257_11225 PF13614 AAA domain KQ257_11240 PF09335 SNARE associated Golgi protein KQ257_11245 PF07681 DoxX KQ257_11250 PF04286 Protein of unknown function (DUF445) KQ257_11255 PF00117 Glutamine amidotransferase class-I KQ257_11255 PF00958 GMP synthase C terminal domain KQ257_11255 PF02540 NAD synthase KQ257_11260 PF13427 Domain of unknown function (DUF4111) KQ257_11260 PF01909 Nucleotidyltransferase domain KQ257_11265 PF03551 Transcriptional regulator PadR-like family KQ257_11275 PF05726 Pirin C-terminal cupin domain KQ257_11275 PF02678 Pirin KQ257_11295 PF03485 Arginyl tRNA synthetase N terminal domain KQ257_11295 PF00750 tRNA synthetases class I (R) KQ257_11295 PF05746 DALR anticodon binding domain KQ257_11300 PF03949 Malic enzyme, NAD binding domain KQ257_11300 PF00390 Malic enzyme, N-terminal domain KQ257_11310 PF04261 Dyp-type peroxidase family KQ257_11315 PF01810 LysE type translocator KQ257_11320 PF00950 ABC 3 transport family KQ257_11325 PF00005 ABC transporter KQ257_11345 PF00119 ATP synthase A chain KQ257_11350 PF00137 ATP synthase subunit C KQ257_11355 PF00430 ATP synthase B/B' CF(0) KQ257_11360 PF00213 ATP synthase delta (OSCP) subunit KQ257_11365 PF00306 ATP synthase alpha/beta chain, C terminal domain KQ257_11365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ257_11365 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ257_11370 PF00231 ATP synthase KQ257_11375 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ257_11375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ257_11380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KQ257_11385 PF11008 Protein of unknown function (DUF2846) KQ257_11395 PF00255 Glutathione peroxidase KQ257_11405 PF07690 Major Facilitator Superfamily KQ257_11410 PF00440 Bacterial regulatory proteins, tetR family KQ257_11415 PF00892 EamA-like transporter family KQ257_11420 PF01300 Telomere recombination KQ257_11425 PF17782 DprA winged helix domain KQ257_11425 PF02481 DNA recombination-mediator protein A KQ257_11435 PF01327 Polypeptide deformylase KQ257_11460 PF00440 Bacterial regulatory proteins, tetR family KQ257_11495 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_11505 PF03358 NADPH-dependent FMN reductase KQ257_11525 PF11842 Domain of unknown function (DUF3362) KQ257_11525 PF04055 Radical SAM superfamily KQ257_11525 PF08497 Radical SAM N-terminal KQ257_11540 PF00817 impB/mucB/samB family KQ257_11540 PF11799 impB/mucB/samB family C-terminal domain KQ257_11540 PF11798 IMS family HHH motif KQ257_11550 PF07690 Major Facilitator Superfamily KQ257_11555 PF03641 Possible lysine decarboxylase KQ257_11560 PF03471 Transporter associated domain KQ257_11560 PF03741 Integral membrane protein TerC family KQ257_11565 PF02810 SEC-C motif KQ257_11570 PF03458 UPF0126 domain KQ257_11575 PF07690 Major Facilitator Superfamily KQ257_11580 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ257_11580 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ257_11585 PF00501 AMP-binding enzyme KQ257_11585 PF13193 AMP-binding enzyme C-terminal domain KQ257_11600 PF00719 Inorganic pyrophosphatase KQ257_11605 PF03573 outer membrane porin, OprD family KQ257_11615 PF00701 Dihydrodipicolinate synthetase family KQ257_11625 PF00155 Aminotransferase class I and II KQ257_11625 PF00392 Bacterial regulatory proteins, gntR family KQ257_11630 PF13335 Magnesium chelatase, subunit ChlI C-terminal KQ257_11630 PF01078 Magnesium chelatase, subunit ChlI KQ257_11640 PF00665 Integrase core domain KQ257_11660 PF00872 Transposase, Mutator family KQ257_11675 PF00582 Universal stress protein family KQ257_11680 PF01740 STAS domain KQ257_11680 PF00916 Sulfate permease family KQ257_11690 PF01078 Magnesium chelatase, subunit ChlI KQ257_11690 PF13335 Magnesium chelatase, subunit ChlI C-terminal KQ257_11700 PF00543 Nitrogen regulatory protein P-II KQ257_11705 PF00909 Ammonium Transporter Family KQ257_11710 PF03477 ATP cone domain KQ257_11715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ257_11715 PF01872 RibD C-terminal domain KQ257_11725 PF00677 Lumazine binding domain KQ257_11745 PF02789 Cytosol aminopeptidase family, N-terminal domain KQ257_11745 PF00883 Cytosol aminopeptidase family, catalytic domain KQ257_11755 PF03739 Lipopolysaccharide export system permease LptF/LptG KQ257_11760 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KQ257_11760 PF01676 Metalloenzyme superfamily KQ257_11765 PF00595 PDZ domain KQ257_11765 PF03572 Peptidase family S41 KQ257_11770 PF02954 Bacterial regulatory protein, Fis family KQ257_11770 PF00072 Response regulator receiver domain KQ257_11770 PF00158 Sigma-54 interaction domain KQ257_11775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_11775 PF00512 His Kinase A (phospho-acceptor) domain KQ257_11780 PF00196 Bacterial regulatory proteins, luxR family KQ257_11780 PF00072 Response regulator receiver domain KQ257_11785 PF00768 D-alanyl-D-alanine carboxypeptidase KQ257_11790 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_11795 PF01842 ACT domain KQ257_11795 PF00742 Homoserine dehydrogenase KQ257_11795 PF03447 Homoserine dehydrogenase, NAD binding domain KQ257_11800 PF10411 Disulfide bond isomerase protein N-terminus KQ257_11800 PF13098 Thioredoxin-like domain KQ257_11805 PF02899 Phage integrase, N-terminal SAM-like domain KQ257_11805 PF00589 Phage integrase family KQ257_11815 PF07670 Nucleoside recognition KQ257_11815 PF02421 Ferrous iron transport protein B KQ257_11815 PF07664 Ferrous iron transport protein B C terminus KQ257_11825 PF02875 Mur ligase family, glutamate ligase domain KQ257_11825 PF08245 Mur ligase middle domain KQ257_11830 PF01098 Cell cycle protein KQ257_11835 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ257_11840 PF01258 Prokaryotic dksA/traR C4-type zinc finger KQ257_11845 PF00149 Calcineurin-like phosphoesterase KQ257_11850 PF00293 NUDIX domain KQ257_11855 PF13667 ThiC-associated domain KQ257_11855 PF01964 Radical SAM ThiC family KQ257_11870 PF00892 EamA-like transporter family KQ257_11875 PF02321 Outer membrane efflux protein KQ257_11880 PF01895 PhoU domain KQ257_11885 PF04362 Bacterial Fe(2+) trafficking KQ257_11890 PF14698 Argininosuccinate lyase C-terminal KQ257_11890 PF00206 Lyase KQ257_11895 PF07694 5TMR of 5TMR-LYT KQ257_11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_11895 PF06580 Histidine kinase KQ257_11900 PF04397 LytTr DNA-binding domain KQ257_11900 PF00072 Response regulator receiver domain KQ257_11905 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KQ257_11905 PF03900 Porphobilinogen deaminase, C-terminal domain KQ257_11930 PF00816 H-NS histone family KQ257_11945 PF00263 Bacterial type II and III secretion system protein KQ257_11945 PF03958 Bacterial type II/III secretion system short domain KQ257_11950 PF12401 Protein of unknown function (DUF2662) KQ257_11950 PF00498 FHA domain KQ257_11955 PF13419 Haloacid dehalogenase-like hydrolase KQ257_11960 PF04715 Anthranilate synthase component I, N terminal region KQ257_11960 PF00425 chorismate binding enzyme KQ257_11985 PF00009 Elongation factor Tu GTP binding domain KQ257_11985 PF03144 Elongation factor Tu domain 2 KQ257_11985 PF03143 Elongation factor Tu C-terminal domain KQ257_11995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KQ257_12000 PF02357 Transcription termination factor nusG KQ257_12000 PF00467 KOW motif KQ257_12005 PF00298 Ribosomal protein L11, RNA binding domain KQ257_12005 PF03946 Ribosomal protein L11, N-terminal domain KQ257_12010 PF00687 Ribosomal protein L1p/L10e family KQ257_12015 PF00466 Ribosomal protein L10 KQ257_12020 PF00542 Ribosomal protein L7/L12 C-terminal domain KQ257_12020 PF16320 Ribosomal protein L7/L12 dimerisation domain KQ257_12025 PF04560 RNA polymerase Rpb2, domain 7 KQ257_12025 PF00562 RNA polymerase Rpb2, domain 6 KQ257_12025 PF04565 RNA polymerase Rpb2, domain 3 KQ257_12025 PF10385 RNA polymerase beta subunit external 1 domain KQ257_12025 PF04563 RNA polymerase beta subunit KQ257_12025 PF04561 RNA polymerase Rpb2, domain 2 KQ257_12030 PF04998 RNA polymerase Rpb1, domain 5 KQ257_12030 PF04997 RNA polymerase Rpb1, domain 1 KQ257_12030 PF00623 RNA polymerase Rpb1, domain 2 KQ257_12030 PF04983 RNA polymerase Rpb1, domain 3 KQ257_12030 PF05000 RNA polymerase Rpb1, domain 4 KQ257_12055 PF03553 Na+/H+ antiporter family KQ257_12055 PF13726 Na+-H+ antiporter family KQ257_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_12070 PF00183 Hsp90 protein KQ257_12085 PF01323 DSBA-like thioredoxin domain KQ257_12095 PF00376 MerR family regulatory protein KQ257_12095 PF09278 MerR, DNA binding KQ257_12115 PF00108 Thiolase, N-terminal domain KQ257_12115 PF02803 Thiolase, C-terminal domain KQ257_12120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ257_12120 PF00378 Enoyl-CoA hydratase/isomerase KQ257_12120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ257_12130 PF13936 Helix-turn-helix domain KQ257_12130 PF00665 Integrase core domain KQ257_12150 PF01541 GIY-YIG catalytic domain KQ257_12150 PF02151 UvrB/uvrC motif KQ257_12150 PF08459 UvrC Helix-hairpin-helix N-terminal KQ257_12160 PF01066 CDP-alcohol phosphatidyltransferase KQ257_12165 PF12833 Helix-turn-helix domain KQ257_12165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ257_12165 PF02805 Metal binding domain of Ada KQ257_12165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ257_12190 PF13533 Biotin-lipoyl like KQ257_12195 PF03652 Holliday junction resolvase KQ257_12200 PF02622 Uncharacterized ACR, COG1678 KQ257_12205 PF02463 RecF/RecN/SMC N terminal domain KQ257_12215 PF06865 Pyrimidine/purine nucleoside phosphorylase KQ257_12220 PF00588 SpoU rRNA Methylase family KQ257_12220 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ257_12230 PF01121 Dephospho-CoA kinase KQ257_12235 PF06750 Bacterial Peptidase A24 N-terminal domain KQ257_12235 PF01478 Type IV leader peptidase family KQ257_12240 PF00482 Type II secretion system (T2SS), protein F KQ257_12245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ257_12245 PF00437 Type II/IV secretion system protein KQ257_12250 PF00121 Triosephosphate isomerase KQ257_12255 PF03840 Preprotein translocase SecG subunit KQ257_12275 PF17384 RimP C-terminal SH3 domain KQ257_12275 PF02576 RimP N-terminal domain KQ257_12280 PF08529 NusA N-terminal domain KQ257_12280 PF13184 NusA-like KH domain KQ257_12280 PF00575 S1 RNA binding domain KQ257_12285 PF04760 Translation initiation factor IF-2, N-terminal region KQ257_12285 PF08364 Bacterial translation initiation factor IF-2 associated region KQ257_12285 PF11987 Translation-initiation factor 2 KQ257_12285 PF00009 Elongation factor Tu GTP binding domain KQ257_12290 PF02033 Ribosome-binding factor A KQ257_12295 PF03334 Na+/H+ antiporter subunit KQ257_12300 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KQ257_12305 PF01899 Na+/H+ ion antiporter subunit KQ257_12310 PF00361 Proton-conducting membrane transporter KQ257_12315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ257_12320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ257_12320 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KQ257_12320 PF13244 Domain of unknown function (DUF4040) KQ257_12320 PF00361 Proton-conducting membrane transporter KQ257_12335 PF01502 Phosphoribosyl-AMP cyclohydrolase KQ257_12340 PF01494 FAD binding domain KQ257_12345 PF03109 ABC1 family KQ257_12355 PF01209 ubiE/COQ5 methyltransferase family KQ257_12365 PF03976 Polyphosphate kinase 2 (PPK2) KQ257_12375 PF17946 RecC C-terminal domain KQ257_12380 PF12705 PD-(D/E)XK nuclease superfamily KQ257_12380 PF00580 UvrD/REP helicase N-terminal domain KQ257_12380 PF13361 UvrD-like helicase C-terminal domain KQ257_12385 PF13538 UvrD-like helicase C-terminal domain KQ257_12390 PF00144 Beta-lactamase KQ257_12395 PF00312 Ribosomal protein S15 KQ257_12400 PF00575 S1 RNA binding domain KQ257_12400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KQ257_12400 PF00013 KH domain KQ257_12400 PF03725 3' exoribonuclease family, domain 2 KQ257_12400 PF01138 3' exoribonuclease family, domain 1 KQ257_12405 PF01544 CorA-like Mg2+ transporter protein KQ257_12415 PF00226 DnaJ domain KQ257_12415 PF01556 DnaJ C terminal domain KQ257_12425 PF01430 Hsp33 protein KQ257_12430 PF02254 TrkA-N domain KQ257_12430 PF00999 Sodium/hydrogen exchanger family KQ257_12435 PF00271 Helicase conserved C-terminal domain KQ257_12435 PF17764 3′ DNA-binding domain (3′BD) KQ257_12435 PF18074 Primosomal protein N C-terminal domain KQ257_12435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KQ257_12435 PF00270 DEAD/DEAH box helicase KQ257_12440 PF00482 Type II secretion system (T2SS), protein F KQ257_12445 PF08334 Type II secretion system (T2SS), protein G KQ257_12445 PF07963 Prokaryotic N-terminal methylation motif KQ257_12455 PF01588 Putative tRNA binding domain KQ257_12460 PF00795 Carbon-nitrogen hydrolase KQ257_12465 PF03471 Transporter associated domain KQ257_12465 PF00571 CBS domain KQ257_12470 PF01206 Sulfurtransferase TusA KQ257_12490 PF01177 Asp/Glu/Hydantoin racemase KQ257_12500 PF00762 Ferrochelatase KQ257_12505 PF00753 Metallo-beta-lactamase superfamily KQ257_12510 PF03884 DNA gyrase inhibitor YacG KQ257_12520 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_12520 PF13247 4Fe-4S dicluster domain KQ257_12520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ257_12530 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KQ257_12545 PF01197 Ribosomal protein L31 KQ257_12550 PF03109 ABC1 family KQ257_12555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_12555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ257_12560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ257_12560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_12560 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_12565 PF01554 MatE KQ257_12575 PF06969 HemN C-terminal domain KQ257_12575 PF04055 Radical SAM superfamily KQ257_12580 PF00106 short chain dehydrogenase KQ257_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_12585 PF03466 LysR substrate binding domain KQ257_12600 PF00501 AMP-binding enzyme KQ257_12600 PF13193 AMP-binding enzyme C-terminal domain KQ257_12605 PF12111 Polyribonucleotide phosphorylase C terminal KQ257_12605 PF10150 Ribonuclease E/G family KQ257_12605 PF00575 S1 RNA binding domain KQ257_12610 PF00849 RNA pseudouridylate synthase KQ257_12610 PF01479 S4 domain KQ257_12615 PF13419 Haloacid dehalogenase-like hydrolase KQ257_12620 PF13280 WYL domain KQ257_12620 PF08279 HTH domain KQ257_12625 PF02798 Glutathione S-transferase, N-terminal domain KQ257_12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_12635 PF03466 LysR substrate binding domain KQ257_12640 PF12706 Beta-lactamase superfamily domain KQ257_12645 PF00141 Peroxidase KQ257_12650 PF01590 GAF domain KQ257_12650 PF02896 PEP-utilising enzyme, TIM barrel domain KQ257_12650 PF05524 PEP-utilising enzyme, N-terminal KQ257_12650 PF00391 PEP-utilising enzyme, mobile domain KQ257_12655 PF00293 NUDIX domain KQ257_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_12665 PF03466 LysR substrate binding domain KQ257_12675 PF00330 Aconitase family (aconitate hydratase) KQ257_12680 PF00694 Aconitase C-terminal domain KQ257_12690 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ257_12705 PF01176 Translation initiation factor 1A / IF-1 KQ257_12715 PF01416 tRNA pseudouridine synthase KQ257_12735 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ257_12735 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ257_12745 PF00375 Sodium:dicarboxylate symporter family KQ257_12755 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ257_12760 PF01810 LysE type translocator KQ257_12765 PF00005 ABC transporter KQ257_12765 PF12848 ABC transporter KQ257_12765 PF16326 ABC transporter C-terminal domain KQ257_12770 PF04102 SlyX KQ257_12775 PF00107 Zinc-binding dehydrogenase KQ257_12775 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_12780 PF01638 HxlR-like helix-turn-helix KQ257_12790 PF01751 Toprim domain KQ257_12790 PF01396 Topoisomerase DNA binding C4 zinc finger KQ257_12790 PF08272 Topoisomerase I zinc-ribbon-like KQ257_12790 PF01131 DNA topoisomerase KQ257_12805 PF00580 UvrD/REP helicase N-terminal domain KQ257_12805 PF13361 UvrD-like helicase C-terminal domain KQ257_12810 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KQ257_12830 PF00999 Sodium/hydrogen exchanger family KQ257_12830 PF02254 TrkA-N domain KQ257_12835 PF00471 Ribosomal protein L33 KQ257_12840 PF00830 Ribosomal L28 family KQ257_12845 PF00171 Aldehyde dehydrogenase family KQ257_12855 PF01842 ACT domain KQ257_12855 PF00551 Formyl transferase KQ257_12865 PF01618 MotA/TolQ/ExbB proton channel family KQ257_12875 PF01625 Peptide methionine sulfoxide reductase KQ257_12885 PF00186 Dihydrofolate reductase KQ257_12890 PF00303 Thymidylate synthase KQ257_12905 PF01790 Prolipoprotein diacylglyceryl transferase KQ257_12925 PF00902 Sec-independent protein translocase protein (TatC) KQ257_12930 PF02416 mttA/Hcf106 family KQ257_12935 PF02416 mttA/Hcf106 family KQ257_12945 PF01725 Ham1 family KQ257_12955 PF00561 alpha/beta hydrolase fold KQ257_12955 PF07021 Methionine biosynthesis protein MetW KQ257_12960 PF00561 alpha/beta hydrolase fold KQ257_12965 PF00682 HMGL-like KQ257_12965 PF08502 LeuA allosteric (dimerisation) domain KQ257_12970 PF18331 PKHD-type hydroxylase C-terminal domain KQ257_12970 PF13640 2OG-Fe(II) oxygenase superfamily KQ257_12975 PF00593 TonB dependent receptor KQ257_12975 PF07715 TonB-dependent Receptor Plug Domain KQ257_12980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ257_12980 PF05698 Bacterial trigger factor protein (TF) C-terminus KQ257_12980 PF05697 Bacterial trigger factor protein (TF) KQ257_12985 PF00574 Clp protease KQ257_12990 PF07724 AAA domain (Cdc48 subfamily) KQ257_12990 PF06689 ClpX C4-type zinc finger KQ257_12990 PF10431 C-terminal, D2-small domain, of ClpB protein KQ257_13005 PF05681 Fumarate hydratase (Fumerase) KQ257_13005 PF05683 Fumarase C-terminus KQ257_13010 PF01515 Phosphate acetyl/butaryl transferase KQ257_13010 PF07085 DRTGG domain KQ257_13015 PF00871 Acetokinase family KQ257_13020 PF00920 Dehydratase family KQ257_13025 PF01081 KDPG and KHG aldolase KQ257_13030 PF02447 GntP family permease KQ257_13035 PF01202 Shikimate kinase KQ257_13040 PF00171 Aldehyde dehydrogenase family KQ257_13045 PF00171 Aldehyde dehydrogenase family KQ257_13050 PF00561 alpha/beta hydrolase fold KQ257_13060 PF00933 Glycosyl hydrolase family 3 N terminal domain KQ257_13065 PF03572 Peptidase family S41 KQ257_13065 PF17804 Tail specific protease N-terminal domain KQ257_13065 PF11818 C-terminal domain of tail specific protease (DUF3340) KQ257_13065 PF00595 PDZ domain KQ257_13070 PF00534 Glycosyl transferases group 1 KQ257_13070 PF13439 Glycosyltransferase Family 4 KQ257_13075 PF01569 PAP2 superfamily KQ257_13080 PF04384 Iron-sulphur cluster assembly KQ257_13085 PF00334 Nucleoside diphosphate kinase KQ257_13090 PF04055 Radical SAM superfamily KQ257_13100 PF13464 Domain of unknown function (DUF4115) KQ257_13105 PF04551 GcpE protein KQ257_13110 PF03129 Anticodon binding domain KQ257_13110 PF13393 Histidyl-tRNA synthetase KQ257_13120 PF13360 PQQ-like domain KQ257_13125 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KQ257_13125 PF01926 50S ribosome-binding GTPase KQ257_13135 PF02556 Preprotein translocase subunit SecB KQ257_13140 PF00462 Glutaredoxin KQ257_13150 PF03193 RsgA GTPase KQ257_13155 PF00929 Exonuclease KQ257_13170 PF02321 Outer membrane efflux protein KQ257_13175 PF12704 MacB-like periplasmic core domain KQ257_13175 PF02687 FtsX-like permease family KQ257_13175 PF00005 ABC transporter KQ257_13195 PF08264 Anticodon-binding domain of tRNA KQ257_13195 PF00133 tRNA synthetases class I (I, L, M and V) KQ257_13195 PF13603 Leucyl-tRNA synthetase, Domain 2 KQ257_13195 PF09334 tRNA synthetases class I (M) KQ257_13205 PF00205 Thiamine pyrophosphate enzyme, central domain KQ257_13205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ257_13205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ257_13210 PF10369 Small subunit of acetolactate synthase KQ257_13215 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KQ257_13215 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KQ257_13240 PF00009 Elongation factor Tu GTP binding domain KQ257_13240 PF03144 Elongation factor Tu domain 2 KQ257_13240 PF16658 Class II release factor RF3, C-terminal domain KQ257_13255 PF01026 TatD related DNase KQ257_13260 PF00330 Aconitase family (aconitate hydratase) KQ257_13260 PF00694 Aconitase C-terminal domain KQ257_13265 PF00899 ThiF family KQ257_13275 PF03466 LysR substrate binding domain KQ257_13275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_13285 PF01207 Dihydrouridine synthase (Dus) KQ257_13290 PF07690 Major Facilitator Superfamily KQ257_13300 PF00892 EamA-like transporter family KQ257_13305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KQ257_13305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KQ257_13310 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KQ257_13315 PF02233 NAD(P) transhydrogenase beta subunit KQ257_13320 PF00106 short chain dehydrogenase KQ257_13330 PF01261 Xylose isomerase-like TIM barrel KQ257_13335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ257_13335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ257_13340 PF00378 Enoyl-CoA hydratase/isomerase KQ257_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_13345 PF00512 His Kinase A (phospho-acceptor) domain KQ257_13345 PF01627 Hpt domain KQ257_13345 PF00072 Response regulator receiver domain KQ257_13345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KQ257_13345 PF00672 HAMP domain KQ257_13350 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_13360 PF05958 tRNA (Uracil-5-)-methyltransferase KQ257_13365 PF13291 ACT domain KQ257_13365 PF04607 Region found in RelA / SpoT proteins KQ257_13365 PF02824 TGS domain KQ257_13370 PF00106 short chain dehydrogenase KQ257_13375 PF03819 MazG nucleotide pyrophosphohydrolase domain KQ257_13385 PF01743 Poly A polymerase head domain KQ257_13385 PF12626 Polymerase A arginine-rich C-terminus KQ257_13385 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ257_13390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KQ257_13395 PF02548 Ketopantoate hydroxymethyltransferase KQ257_13400 PF02569 Pantoate-beta-alanine ligase KQ257_13405 PF03668 P-loop ATPase protein family KQ257_13410 PF00381 PTS HPr component phosphorylation site KQ257_13415 PF04751 Protein of unknown function (DUF615) KQ257_13425 PF13356 Arm DNA-binding domain KQ257_13425 PF00589 Phage integrase family KQ257_13425 PF14659 Phage integrase, N-terminal SAM-like domain KQ257_13475 PF00436 Single-strand binding protein family KQ257_13485 PF03129 Anticodon binding domain KQ257_13485 PF02824 TGS domain KQ257_13485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ257_13485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ257_13490 PF00707 Translation initiation factor IF-3, C-terminal domain KQ257_13490 PF05198 Translation initiation factor IF-3, N-terminal domain KQ257_13495 PF00043 Glutathione S-transferase, C-terminal domain KQ257_13495 PF02798 Glutathione S-transferase, N-terminal domain KQ257_13500 PF09335 SNARE associated Golgi protein KQ257_13505 PF07690 Major Facilitator Superfamily KQ257_13510 PF01632 Ribosomal protein L35 KQ257_13515 PF00453 Ribosomal protein L20 KQ257_13535 PF00872 Transposase, Mutator family KQ257_13545 PF01409 tRNA synthetases class II core domain (F) KQ257_13545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KQ257_13550 PF03483 B3/4 domain KQ257_13550 PF03484 tRNA synthetase B5 domain KQ257_13550 PF03147 Ferredoxin-fold anticodon binding domain KQ257_13550 PF01588 Putative tRNA binding domain KQ257_13550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KQ257_13555 PF00216 Bacterial DNA-binding protein KQ257_13570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ257_13570 PF07498 Rho termination factor, N-terminal domain KQ257_13570 PF07497 Rho termination factor, RNA-binding domain KQ257_13575 PF00085 Thioredoxin KQ257_13580 PF02541 Ppx/GppA phosphatase family KQ257_13585 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KQ257_13590 PF11734 TilS substrate C-terminal domain KQ257_13590 PF01171 PP-loop family KQ257_13590 PF09179 TilS substrate binding domain KQ257_13595 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ257_13595 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ257_13600 PF02325 YGGT family KQ257_13605 PF01367 5'-3' exonuclease, C-terminal SAM fold KQ257_13605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KQ257_13605 PF00476 DNA polymerase family A KQ257_13605 PF01612 3'-5' exonuclease KQ257_13625 PF00437 Type II/IV secretion system protein KQ257_13630 PF02566 OsmC-like protein KQ257_13635 PF01047 MarR family KQ257_13645 PF00795 Carbon-nitrogen hydrolase KQ257_13690 PF04963 Sigma-54 factor, core binding domain KQ257_13690 PF00309 Sigma-54 factor, Activator interacting domain (AID) KQ257_13690 PF04552 Sigma-54, DNA binding domain KQ257_13695 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KQ257_13700 PF01722 BolA-like protein KQ257_13705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ257_13710 PF01634 ATP phosphoribosyltransferase KQ257_13715 PF00815 Histidinol dehydrogenase KQ257_13720 PF00155 Aminotransferase class I and II KQ257_13725 PF00425 chorismate binding enzyme KQ257_13725 PF04715 Anthranilate synthase component I, N terminal region KQ257_13750 PF00293 NUDIX domain KQ257_13755 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_13760 PF00814 Glycoprotease family KQ257_13765 PF04445 Putative SAM-dependent methyltransferase KQ257_13775 PF00756 Putative esterase KQ257_13785 PF00834 Ribulose-phosphate 3 epimerase family KQ257_13800 PF07732 Multicopper oxidase KQ257_13800 PF07731 Multicopper oxidase KQ257_13800 PF00394 Multicopper oxidase KQ257_13815 PF00893 Small Multidrug Resistance protein KQ257_13820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ257_13820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ257_13825 PF01960 ArgJ family KQ257_13830 PF02445 Quinolinate synthetase A protein KQ257_13855 PF00962 Adenosine/AMP deaminase KQ257_13860 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_13860 PF00107 Zinc-binding dehydrogenase KQ257_13865 PF03466 LysR substrate binding domain KQ257_13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_13870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_13870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_13870 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_13875 PF07690 Major Facilitator Superfamily KQ257_13880 PF02515 CoA-transferase family III KQ257_13890 PF14537 Cytochrome c3 KQ257_13890 PF00890 FAD binding domain KQ257_13895 PF03466 LysR substrate binding domain KQ257_13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_13905 PF07690 Major Facilitator Superfamily KQ257_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_13910 PF03466 LysR substrate binding domain KQ257_13920 PF07687 Peptidase dimerisation domain KQ257_13920 PF01546 Peptidase family M20/M25/M40 KQ257_13925 PF12833 Helix-turn-helix domain KQ257_13925 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ257_13940 PF08267 Cobalamin-independent synthase, N-terminal domain KQ257_13940 PF01717 Cobalamin-independent synthase, Catalytic domain KQ257_13945 PF01613 Flavin reductase like domain KQ257_13955 PF13476 AAA domain KQ257_13975 PF00872 Transposase, Mutator family KQ257_13985 PF02567 Phenazine biosynthesis-like protein KQ257_14000 PF00268 Ribonucleotide reductase, small chain KQ257_14010 PF00317 Ribonucleotide reductase, all-alpha domain KQ257_14010 PF03477 ATP cone domain KQ257_14010 PF02867 Ribonucleotide reductase, barrel domain KQ257_14020 PF00072 Response regulator receiver domain KQ257_14020 PF00486 Transcriptional regulatory protein, C terminal KQ257_14025 PF00512 His Kinase A (phospho-acceptor) domain KQ257_14025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_14025 PF00672 HAMP domain KQ257_14035 PF17151 Periplasmic sensor domain KQ257_14035 PF00990 Diguanylate cyclase, GGDEF domain KQ257_14040 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KQ257_14045 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KQ257_14050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KQ257_14050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KQ257_14060 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KQ257_14060 PF10531 SLBB domain KQ257_14060 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KQ257_14065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ257_14065 PF00384 Molybdopterin oxidoreductase KQ257_14065 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KQ257_14070 PF00146 NADH dehydrogenase KQ257_14075 PF12838 4Fe-4S dicluster domain KQ257_14080 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KQ257_14085 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ257_14090 PF00361 Proton-conducting membrane transporter KQ257_14090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ257_14095 PF00361 Proton-conducting membrane transporter KQ257_14100 PF00361 Proton-conducting membrane transporter KQ257_14110 PF00313 'Cold-shock' DNA-binding domain KQ257_14115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_14115 PF03466 LysR substrate binding domain KQ257_14120 PF00175 Oxidoreductase NAD-binding domain KQ257_14120 PF00970 Oxidoreductase FAD-binding domain KQ257_14135 PF05552 Conserved TM helix KQ257_14150 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_14155 PF13533 Biotin-lipoyl like KQ257_14180 PF09334 tRNA synthetases class I (M) KQ257_14180 PF01588 Putative tRNA binding domain KQ257_14190 PF10609 NUBPL iron-transfer P-loop NTPase KQ257_14195 PF01048 Phosphorylase superfamily KQ257_14210 PF00692 dUTPase KQ257_14240 PF01207 Dihydrouridine synthase (Dus) KQ257_14250 PF00448 SRP54-type protein, GTPase domain KQ257_14250 PF02881 SRP54-type protein, helical bundle domain KQ257_14250 PF02978 Signal peptide binding domain KQ257_14255 PF03309 Type III pantothenate kinase KQ257_14265 PF01925 Sulfite exporter TauE/SafE KQ257_14280 PF02463 RecF/RecN/SMC N terminal domain KQ257_14280 PF06470 SMC proteins Flexible Hinge Domain KQ257_14290 PF01653 NAD-dependent DNA ligase adenylation domain KQ257_14290 PF00533 BRCA1 C Terminus (BRCT) domain KQ257_14290 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KQ257_14290 PF12826 Helix-hairpin-helix motif KQ257_14290 PF03120 NAD-dependent DNA ligase OB-fold domain KQ257_14295 PF00210 Ferritin-like domain KQ257_14300 PF07690 Major Facilitator Superfamily KQ257_14305 PF00982 Glycosyltransferase family 20 KQ257_14310 PF02358 Trehalose-phosphatase KQ257_14315 PF12697 Alpha/beta hydrolase family KQ257_14315 PF08241 Methyltransferase domain KQ257_14320 PF00202 Aminotransferase class-III KQ257_14320 PF06968 Biotin and Thiamin Synthesis associated domain KQ257_14320 PF04055 Radical SAM superfamily KQ257_14325 PF00155 Aminotransferase class I and II KQ257_14340 PF00849 RNA pseudouridylate synthase KQ257_14340 PF01479 S4 domain KQ257_14345 PF04079 Segregation and condensation complex subunit ScpB KQ257_14350 PF02616 Segregation and condensation protein ScpA KQ257_14355 PF01300 Telomere recombination KQ257_14360 PF04315 Elongation factor P hydroxylase KQ257_14365 PF02620 Large ribosomal RNA subunit accumulation protein YceD KQ257_14370 PF01783 Ribosomal L32p protein family KQ257_14375 PF00698 Acyl transferase domain KQ257_14385 PF00550 Phosphopantetheine attachment site KQ257_14390 PF01476 LysM domain KQ257_14390 PF04972 BON domain KQ257_14395 PF08543 Phosphomethylpyrimidine kinase KQ257_14395 PF03070 TENA/THI-4/PQQC family KQ257_14395 PF02581 Thiamine monophosphate synthase KQ257_14405 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ257_14420 PF02261 Aspartate decarboxylase KQ257_14425 PF01195 Peptidyl-tRNA hydrolase KQ257_14430 PF01386 Ribosomal L25p family KQ257_14435 PF14572 Phosphoribosyl synthetase-associated domain KQ257_14435 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ257_14460 PF08544 GHMP kinases C terminal KQ257_14460 PF00288 GHMP kinases N terminal domain KQ257_14465 PF03550 Outer membrane lipoprotein LolB KQ257_14475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KQ257_14475 PF01488 Shikimate / quinate 5-dehydrogenase KQ257_14475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KQ257_14480 PF08278 DNA primase DnaG DnaB-binding KQ257_14480 PF01807 CHC2 zinc finger KQ257_14480 PF10410 DnaB-helicase binding domain of primase KQ257_14480 PF08275 DNA primase catalytic core, N-terminal domain KQ257_14485 PF13525 Outer membrane lipoprotein KQ257_14490 PF01479 S4 domain KQ257_14490 PF00849 RNA pseudouridylate synthase KQ257_14495 PF02578 Multi-copper polyphenol oxidoreductase laccase KQ257_14500 PF03358 NADPH-dependent FMN reductase KQ257_14505 PF01668 SmpB protein KQ257_14510 PF01467 Cytidylyltransferase-like KQ257_14515 PF00037 4Fe-4S binding domain KQ257_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_14535 PF03466 LysR substrate binding domain KQ257_14540 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ257_14545 PF02028 BCCT, betaine/carnitine/choline family transporter KQ257_14550 PF07859 alpha/beta hydrolase fold KQ257_14555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ257_14555 PF00355 Rieske [2Fe-2S] domain KQ257_14560 PF00171 Aldehyde dehydrogenase family KQ257_14565 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_14565 PF00175 Oxidoreductase NAD-binding domain KQ257_14565 PF00970 Oxidoreductase FAD-binding domain KQ257_14580 PF02540 NAD synthase KQ257_14580 PF00795 Carbon-nitrogen hydrolase KQ257_14590 PF02678 Pirin KQ257_14590 PF05726 Pirin C-terminal cupin domain KQ257_14595 PF03653 Uncharacterised protein family (UPF0093) KQ257_14600 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ257_14600 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ257_14610 PF00164 Ribosomal protein S12/S23 KQ257_14615 PF00177 Ribosomal protein S7p/S5e KQ257_14620 PF03764 Elongation factor G, domain IV KQ257_14620 PF00679 Elongation factor G C-terminus KQ257_14620 PF03144 Elongation factor Tu domain 2 KQ257_14620 PF00009 Elongation factor Tu GTP binding domain KQ257_14620 PF14492 Elongation Factor G, domain II KQ257_14625 PF03143 Elongation factor Tu C-terminal domain KQ257_14625 PF03144 Elongation factor Tu domain 2 KQ257_14625 PF00009 Elongation factor Tu GTP binding domain KQ257_14640 PF00583 Acetyltransferase (GNAT) family KQ257_14645 PF04377 Arginine-tRNA-protein transferase, C terminus KQ257_14645 PF04376 Arginine-tRNA-protein transferase, N terminus KQ257_14650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KQ257_14655 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_14660 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KQ257_14660 PF17854 FtsK alpha domain KQ257_14660 PF09397 Ftsk gamma domain KQ257_14660 PF01580 FtsK/SpoIIIE family KQ257_14665 PF01810 LysE type translocator KQ257_14680 PF03776 Septum formation topological specificity factor MinE KQ257_14685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KQ257_14690 PF03775 Septum formation inhibitor MinC, C-terminal domain KQ257_14700 PF01553 Acyltransferase KQ257_14705 PF13488 Glycine zipper KQ257_14705 PF00691 OmpA family KQ257_14710 PF00580 UvrD/REP helicase N-terminal domain KQ257_14710 PF13361 UvrD-like helicase C-terminal domain KQ257_14715 PF00692 dUTPase KQ257_14720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ257_14720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ257_14720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ257_14720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ257_14725 PF00696 Amino acid kinase family KQ257_14735 PF13230 Glutamine amidotransferases class-II KQ257_14740 PF01814 Hemerythrin HHE cation binding domain KQ257_14750 PF03658 RnfH family Ubiquitin KQ257_14755 PF04355 SmpA / OmlA family KQ257_14760 PF01475 Ferric uptake regulator family KQ257_14765 PF00437 Type II/IV secretion system protein KQ257_14770 PF00437 Type II/IV secretion system protein KQ257_14775 PF01168 Alanine racemase, N-terminal domain KQ257_14785 PF12320 Type 5 capsule protein repressor C-terminal domain KQ257_14785 PF00149 Calcineurin-like phosphoesterase KQ257_14805 PF08338 Domain of unknown function (DUF1731) KQ257_14805 PF01370 NAD dependent epimerase/dehydratase family KQ257_14810 PF01266 FAD dependent oxidoreductase KQ257_14815 PF00490 Delta-aminolevulinic acid dehydratase KQ257_14820 PF03061 Thioesterase superfamily KQ257_14825 PF13533 Biotin-lipoyl like KQ257_14830 PF07690 Major Facilitator Superfamily KQ257_14845 PF00589 Phage integrase family KQ257_14845 PF13356 Arm DNA-binding domain KQ257_14890 PF00436 Single-strand binding protein family KQ257_14910 PF11867 Domain of unknown function (DUF3387) KQ257_14910 PF18766 SWI2/SNF2 ATPase KQ257_14910 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KQ257_14915 PF01420 Type I restriction modification DNA specificity domain KQ257_14920 PF12161 HsdM N-terminal domain KQ257_14920 PF02384 N-6 DNA Methylase KQ257_14940 PF00083 Sugar (and other) transporter KQ257_14945 PF00701 Dihydrodipicolinate synthetase family KQ257_14955 PF04542 Sigma-70 region 2 KQ257_14955 PF08281 Sigma-70, region 4 KQ257_14965 PF00593 TonB dependent receptor KQ257_14965 PF07715 TonB-dependent Receptor Plug Domain KQ257_14975 PF04575 Protein of unknown function (DUF560) KQ257_14985 PF01126 Heme oxygenase KQ257_15010 PF13520 Amino acid permease KQ257_15015 PF02574 Homocysteine S-methyltransferase KQ257_15025 PF06039 Malate:quinone oxidoreductase (Mqo) KQ257_15030 PF05199 GMC oxidoreductase KQ257_15030 PF00732 GMC oxidoreductase KQ257_15035 PF00171 Aldehyde dehydrogenase family KQ257_15040 PF13977 BetI-type transcriptional repressor, C-terminal KQ257_15040 PF00440 Bacterial regulatory proteins, tetR family KQ257_15045 PF02028 BCCT, betaine/carnitine/choline family transporter KQ257_15050 PF02028 BCCT, betaine/carnitine/choline family transporter KQ257_15060 PF03061 Thioesterase superfamily KQ257_15070 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ257_15070 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ257_15075 PF00375 Sodium:dicarboxylate symporter family KQ257_15080 PF07152 YaeQ protein KQ257_15085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ257_15090 PF01522 Polysaccharide deacetylase KQ257_15090 PF14883 Hypothetical glycosyl hydrolase family 13 KQ257_15095 PF00535 Glycosyl transferase family 2 KQ257_15105 PF00378 Enoyl-CoA hydratase/isomerase KQ257_15120 PF09339 IclR helix-turn-helix domain KQ257_15120 PF01614 Bacterial transcriptional regulator KQ257_15125 PF00355 Rieske [2Fe-2S] domain KQ257_15135 PF00355 Rieske [2Fe-2S] domain KQ257_15145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ257_15150 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_15150 PF14759 Reductase C-terminal KQ257_15155 PF07690 Major Facilitator Superfamily KQ257_15165 PF12697 Alpha/beta hydrolase family KQ257_15175 PF03447 Homoserine dehydrogenase, NAD binding domain KQ257_15175 PF01958 Domain of unknown function DUF108 KQ257_15180 PF00171 Aldehyde dehydrogenase family KQ257_15185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ257_15185 PF00205 Thiamine pyrophosphate enzyme, central domain KQ257_15185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ257_15195 PF07690 Major Facilitator Superfamily KQ257_15200 PF01327 Polypeptide deformylase KQ257_15205 PF04960 Glutaminase KQ257_15210 PF02311 AraC-like ligand binding domain KQ257_15210 PF12833 Helix-turn-helix domain KQ257_15215 PF07690 Major Facilitator Superfamily KQ257_15220 PF01263 Aldose 1-epimerase KQ257_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_15230 PF03466 LysR substrate binding domain KQ257_15240 PF07690 Major Facilitator Superfamily KQ257_15245 PF00456 Transketolase, thiamine diphosphate binding domain KQ257_15250 PF02779 Transketolase, pyrimidine binding domain KQ257_15250 PF02780 Transketolase, C-terminal domain KQ257_15255 PF02310 B12 binding domain KQ257_15255 PF02607 B12 binding domain KQ257_15255 PF02965 Vitamin B12 dependent methionine synthase, activation domain KQ257_15255 PF02574 Homocysteine S-methyltransferase KQ257_15255 PF00809 Pterin binding enzyme KQ257_15260 PF01384 Phosphate transporter family KQ257_15265 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_15280 PF03781 Sulfatase-modifying factor enzyme 1 KQ257_15285 PF00884 Sulfatase KQ257_15295 PF01521 Iron-sulphur cluster biosynthesis KQ257_15295 PF01106 NifU-like domain KQ257_15300 PF07715 TonB-dependent Receptor Plug Domain KQ257_15300 PF00593 TonB dependent receptor KQ257_15310 PF00561 alpha/beta hydrolase fold KQ257_15315 PF00484 Carbonic anhydrase KQ257_15320 PF13472 GDSL-like Lipase/Acylhydrolase family KQ257_15325 PF00005 ABC transporter KQ257_15335 PF01694 Rhomboid family KQ257_15340 PF00912 Transglycosylase KQ257_15345 PF02503 Polyphosphate kinase middle domain KQ257_15345 PF13090 Polyphosphate kinase C-terminal domain 2 KQ257_15345 PF17941 Polyphosphate kinase C-terminal domain 1 KQ257_15345 PF13089 Polyphosphate kinase N-terminal domain KQ257_15355 PF03466 LysR substrate binding domain KQ257_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_15360 PF00561 alpha/beta hydrolase fold KQ257_15365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_15365 PF18113 Rubredoxin binding C-terminal domain KQ257_15370 PF00301 Rubredoxin KQ257_15385 PF00152 tRNA synthetases class II (D, K and N) KQ257_15385 PF01336 OB-fold nucleic acid binding domain KQ257_15390 PF14052 Capsule assembly protein Wzi KQ257_15400 PF01507 Phosphoadenosine phosphosulfate reductase family KQ257_15405 PF00009 Elongation factor Tu GTP binding domain KQ257_15425 PF13936 Helix-turn-helix domain KQ257_15425 PF00665 Integrase core domain KQ257_15430 PF00571 CBS domain KQ257_15430 PF03471 Transporter associated domain KQ257_15430 PF01595 Cyclin M transmembrane N-terminal domain KQ257_15435 PF03466 LysR substrate binding domain KQ257_15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_15440 PF00463 Isocitrate lyase family KQ257_15455 PF01774 UreD urease accessory protein KQ257_15460 PF00547 Urease, gamma subunit KQ257_15465 PF00699 Urease beta subunit KQ257_15470 PF00449 Urease alpha-subunit, N-terminal domain KQ257_15470 PF01979 Amidohydrolase family KQ257_15475 PF02814 UreE urease accessory protein, N-terminal domain KQ257_15475 PF05194 UreE urease accessory protein, C-terminal domain KQ257_15480 PF01730 UreF KQ257_15485 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ257_15500 PF00905 Penicillin binding protein transpeptidase domain KQ257_15500 PF03717 Penicillin-binding Protein dimerisation domain KQ257_15515 PF05191 Adenylate kinase, active site lid KQ257_15525 PF10576 Iron-sulfur binding domain of endonuclease III KQ257_15525 PF00633 Helix-hairpin-helix motif KQ257_15525 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ257_15530 PF04060 Putative Fe-S cluster KQ257_15535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ257_15535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ257_15545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KQ257_15550 PF02590 Predicted SPOUT methyltransferase KQ257_15555 PF02190 ATP-dependent protease La (LON) substrate-binding domain KQ257_15555 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ257_15555 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_15560 PF13936 Helix-turn-helix domain KQ257_15560 PF00665 Integrase core domain KQ257_15565 PF01636 Phosphotransferase enzyme family KQ257_15570 PF00665 Integrase core domain KQ257_15570 PF13936 Helix-turn-helix domain KQ257_15580 PF00691 OmpA family KQ257_15580 PF04355 SmpA / OmlA family KQ257_15585 PF01812 5-formyltetrahydrofolate cyclo-ligase family KQ257_15625 PF05195 Aminopeptidase P, N-terminal domain KQ257_15625 PF00557 Metallopeptidase family M24 KQ257_15630 PF01494 FAD binding domain KQ257_15635 PF01494 FAD binding domain KQ257_15645 PF13411 MerR HTH family regulatory protein KQ257_15655 PF01810 LysE type translocator KQ257_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_15660 PF03466 LysR substrate binding domain KQ257_15670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ257_15675 PF02021 Uncharacterised protein family UPF0102 KQ257_15680 PF04972 BON domain KQ257_15690 PF09297 NADH pyrophosphatase zinc ribbon domain KQ257_15690 PF00293 NUDIX domain KQ257_15700 PF00929 Exonuclease KQ257_15705 PF01464 Transglycosylase SLT domain KQ257_15705 PF01464 Transglycosylase SLT domain KQ257_15705 PF01476 LysM domain KQ257_15705 PF01476 LysM domain KQ257_15710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KQ257_15715 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_15720 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_15720 PF12911 N-terminal TM domain of oligopeptide transport permease C KQ257_15725 PF00005 ABC transporter KQ257_15725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ257_15730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ257_15730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_15735 PF00593 TonB dependent receptor KQ257_15735 PF07715 TonB-dependent Receptor Plug Domain KQ257_15745 PF00929 Exonuclease KQ257_15750 PF01979 Amidohydrolase family KQ257_15755 PF00990 Diguanylate cyclase, GGDEF domain KQ257_15755 PF00563 EAL domain KQ257_15755 PF01590 GAF domain KQ257_15755 PF00360 Phytochrome region KQ257_15760 PF00764 Arginosuccinate synthase KQ257_15765 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_15765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ257_15775 PF00589 Phage integrase family KQ257_15775 PF13356 Arm DNA-binding domain KQ257_15790 PF00872 Transposase, Mutator family KQ257_15860 PF13411 MerR HTH family regulatory protein KQ257_15870 PF01252 Signal peptidase (SPase) II KQ257_15880 PF00376 MerR family regulatory protein KQ257_15880 PF09278 MerR, DNA binding KQ257_15885 PF02411 MerT mercuric transport protein KQ257_15890 PF00403 Heavy-metal-associated domain KQ257_15895 PF03203 MerC mercury resistance protein KQ257_15900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ257_15900 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_15900 PF00403 Heavy-metal-associated domain KQ257_15905 PF13411 MerR HTH family regulatory protein KQ257_15920 PF02661 Fic/DOC family KQ257_15930 PF02384 N-6 DNA Methylase KQ257_15955 PF00440 Bacterial regulatory proteins, tetR family KQ257_15970 PF05987 Bacterial protein of unknown function (DUF898) KQ257_15975 PF03180 NLPA lipoprotein KQ257_15990 PF13296 Putative type VI secretion system Rhs element Vgr KQ257_15990 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ257_15990 PF04717 Type VI secretion system, phage-baseplate injector KQ257_15995 PF03527 RHS protein KQ257_15995 PF05593 RHS Repeat KQ257_16025 PF00324 Amino acid permease KQ257_16030 PF01266 FAD dependent oxidoreductase KQ257_16035 PF00324 Amino acid permease KQ257_16045 PF00392 Bacterial regulatory proteins, gntR family KQ257_16045 PF07729 FCD domain KQ257_16055 PF00171 Aldehyde dehydrogenase family KQ257_16065 PF00202 Aminotransferase class-III KQ257_16070 PF04958 Arginine N-succinyltransferase beta subunit KQ257_16075 PF00324 Amino acid permease KQ257_16080 PF00171 Aldehyde dehydrogenase family KQ257_16085 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ257_16085 PF12833 Helix-turn-helix domain KQ257_16090 PF00892 EamA-like transporter family KQ257_16095 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KQ257_16095 PF08666 SAF domain KQ257_16100 PF07690 Major Facilitator Superfamily KQ257_16105 PF13378 Enolase C-terminal domain-like KQ257_16110 PF00701 Dihydrodipicolinate synthetase family KQ257_16115 PF00171 Aldehyde dehydrogenase family KQ257_16120 PF07729 FCD domain KQ257_16120 PF00392 Bacterial regulatory proteins, gntR family KQ257_16125 PF07519 Tannase and feruloyl esterase KQ257_16140 PF03573 outer membrane porin, OprD family KQ257_16145 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_16145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_16155 PF00171 Aldehyde dehydrogenase family KQ257_16160 PF00378 Enoyl-CoA hydratase/isomerase KQ257_16165 PF07690 Major Facilitator Superfamily KQ257_16180 PF00175 Oxidoreductase NAD-binding domain KQ257_16180 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_16185 PF00355 Rieske [2Fe-2S] domain KQ257_16195 PF03781 Sulfatase-modifying factor enzyme 1 KQ257_16200 PF00884 Sulfatase KQ257_16205 PF07690 Major Facilitator Superfamily KQ257_16210 PF03573 outer membrane porin, OprD family KQ257_16215 PF05199 GMC oxidoreductase KQ257_16220 PF07859 alpha/beta hydrolase fold KQ257_16225 PF00106 short chain dehydrogenase KQ257_16230 PF00743 Flavin-binding monooxygenase-like KQ257_16235 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ257_16235 PF12833 Helix-turn-helix domain KQ257_16240 PF05683 Fumarase C-terminus KQ257_16245 PF05681 Fumarate hydratase (Fumerase) KQ257_16250 PF07690 Major Facilitator Superfamily KQ257_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_16255 PF03466 LysR substrate binding domain KQ257_16260 PF04072 Leucine carboxyl methyltransferase KQ257_16265 PF00743 Flavin-binding monooxygenase-like KQ257_16270 PF00106 short chain dehydrogenase KQ257_16280 PF00440 Bacterial regulatory proteins, tetR family KQ257_16280 PF17932 Tetracyclin repressor-like, C-terminal domain KQ257_16285 PF02678 Pirin KQ257_16285 PF17954 Quercetinase C-terminal cupin domain KQ257_16295 PF00106 short chain dehydrogenase KQ257_16300 PF00743 Flavin-binding monooxygenase-like KQ257_16310 PF00860 Permease family KQ257_16315 PF00962 Adenosine/AMP deaminase KQ257_16320 PF01292 Prokaryotic cytochrome b561 KQ257_16330 PF01351 Ribonuclease HII KQ257_16335 PF02599 Global regulator protein family KQ257_16340 PF01842 ACT domain KQ257_16340 PF13840 ACT domain KQ257_16340 PF00696 Amino acid kinase family KQ257_16395 PF01726 LexA DNA binding domain KQ257_16395 PF00717 Peptidase S24-like KQ257_16400 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT KQ257_16495 PF06381 Protein of unknown function (DUF1073) KQ257_16510 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) KQ257_16620 PF13737 Transposase DDE domain KQ257_16625 PF11799 impB/mucB/samB family C-terminal domain KQ257_16625 PF13438 Domain of unknown function (DUF4113) KQ257_16625 PF00817 impB/mucB/samB family KQ257_16630 PF00717 Peptidase S24-like KQ257_16635 PF00589 Phage integrase family KQ257_16635 PF13356 Arm DNA-binding domain KQ257_16640 PF01411 tRNA synthetases class II (A) KQ257_16640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ257_16640 PF02272 DHHA1 domain KQ257_16645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ257_16645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ257_16650 PF13393 Histidyl-tRNA synthetase KQ257_16655 PF00709 Adenylosuccinate synthetase KQ257_16670 PF00248 Aldo/keto reductase family KQ257_16675 PF00027 Cyclic nucleotide-binding domain KQ257_16675 PF13545 Crp-like helix-turn-helix domain KQ257_16685 PF02566 OsmC-like protein KQ257_16690 PF00583 Acetyltransferase (GNAT) family KQ257_16700 PF07724 AAA domain (Cdc48 subfamily) KQ257_16700 PF02861 Clp amino terminal domain, pathogenicity island component KQ257_16700 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_16700 PF17871 AAA lid domain KQ257_16700 PF10431 C-terminal, D2-small domain, of ClpB protein KQ257_16715 PF10672 S-adenosylmethionine-dependent methyltransferase KQ257_16715 PF02926 THUMP domain KQ257_16715 PF01170 Putative RNA methylase family UPF0020 KQ257_16725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ257_16725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ257_16730 PF01979 Amidohydrolase family KQ257_16735 PF13488 Glycine zipper KQ257_16735 PF00691 OmpA family KQ257_16745 PF13417 Glutathione S-transferase, N-terminal domain KQ257_16745 PF00043 Glutathione S-transferase, C-terminal domain KQ257_16750 PF02390 Putative methyltransferase KQ257_16760 PF00043 Glutathione S-transferase, C-terminal domain KQ257_16760 PF02798 Glutathione S-transferase, N-terminal domain KQ257_16770 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_16770 PF13192 Thioredoxin domain KQ257_16790 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ257_16790 PF00578 AhpC/TSA family KQ257_16795 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KQ257_16795 PF04408 Helicase associated domain (HA2) KQ257_16795 PF00271 Helicase conserved C-terminal domain KQ257_16795 PF00270 DEAD/DEAH box helicase KQ257_16795 PF11898 Domain of unknown function (DUF3418) KQ257_16800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KQ257_16800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KQ257_16810 PF07690 Major Facilitator Superfamily KQ257_16815 PF03594 Benzoate membrane transport protein KQ257_16820 PF00106 short chain dehydrogenase KQ257_16825 PF00970 Oxidoreductase FAD-binding domain KQ257_16825 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_16825 PF00175 Oxidoreductase NAD-binding domain KQ257_16830 PF00866 Ring hydroxylating beta subunit KQ257_16835 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ257_16835 PF00355 Rieske [2Fe-2S] domain KQ257_16840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_16840 PF03466 LysR substrate binding domain KQ257_16850 PF00403 Heavy-metal-associated domain KQ257_16855 PF00376 MerR family regulatory protein KQ257_16855 PF09278 MerR, DNA binding KQ257_16890 PF02601 Exonuclease VII, large subunit KQ257_16890 PF13742 OB-fold nucleic acid binding domain KQ257_16920 PF01810 LysE type translocator KQ257_16925 PF00313 'Cold-shock' DNA-binding domain KQ257_16935 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ257_16935 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ257_16950 PF07690 Major Facilitator Superfamily KQ257_16955 PF01638 HxlR-like helix-turn-helix KQ257_17050 PF01381 Helix-turn-helix KQ257_17075 PF10668 Phage terminase small subunit KQ257_17075 PF03592 Terminase small subunit KQ257_17210 PF00589 Phage integrase family KQ257_17220 PF09190 DALR domain KQ257_17220 PF01406 tRNA synthetases class I (C) catalytic domain KQ257_17225 PF00571 CBS domain KQ257_17225 PF01380 SIS domain KQ257_17240 PF03968 OstA-like protein KQ257_17245 PF12399 Branched-chain amino acid ATP-binding cassette transporter KQ257_17245 PF00005 ABC transporter KQ257_17250 PF02321 Outer membrane efflux protein KQ257_17255 PF00664 ABC transporter transmembrane region KQ257_17255 PF00005 ABC transporter KQ257_17255 PF03412 Peptidase C39 family KQ257_17265 PF01205 Uncharacterized protein family UPF0029 KQ257_17270 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_17280 PF01596 O-methyltransferase KQ257_17290 PF11953 Domain of unknown function (DUF3470) KQ257_17290 PF00037 4Fe-4S binding domain KQ257_17300 PF05188 MutS domain II KQ257_17300 PF05192 MutS domain III KQ257_17300 PF05190 MutS family domain IV KQ257_17300 PF00488 MutS domain V KQ257_17300 PF01624 MutS domain I KQ257_17305 PF01037 Lrp/AsnC ligand binding domain KQ257_17310 PF00892 EamA-like transporter family KQ257_17315 PF00563 EAL domain KQ257_17315 PF00990 Diguanylate cyclase, GGDEF domain KQ257_17315 PF03707 Bacterial signalling protein N terminal repeat KQ257_17320 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ257_17330 PF07690 Major Facilitator Superfamily KQ257_17335 PF01177 Asp/Glu/Hydantoin racemase KQ257_17340 PF00291 Pyridoxal-phosphate dependent enzyme KQ257_17345 PF00005 ABC transporter KQ257_17350 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_17355 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ257_17375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ257_17375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ257_17405 PF05593 RHS Repeat KQ257_17405 PF03527 RHS protein KQ257_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_17450 PF03466 LysR substrate binding domain KQ257_17455 PF01566 Natural resistance-associated macrophage protein KQ257_17460 PF03746 LamB/YcsF family KQ257_17465 PF07286 Protein of unknown function (DUF1445) KQ257_17475 PF02785 Biotin carboxylase C-terminal domain KQ257_17475 PF00289 Biotin carboxylase, N-terminal domain KQ257_17475 PF00364 Biotin-requiring enzyme KQ257_17475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ257_17480 PF00654 Voltage gated chloride channel KQ257_17485 PF00226 DnaJ domain KQ257_17485 PF00684 DnaJ central domain KQ257_17485 PF01556 DnaJ C terminal domain KQ257_17500 PF13823 Alcohol dehydrogenase GroES-associated KQ257_17500 PF00107 Zinc-binding dehydrogenase KQ257_17500 PF08240 Alcohol dehydrogenase GroES-like domain KQ257_17515 PF02785 Biotin carboxylase C-terminal domain KQ257_17515 PF00289 Biotin carboxylase, N-terminal domain KQ257_17515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ257_17520 PF02525 Flavodoxin-like fold KQ257_17525 PF01638 HxlR-like helix-turn-helix KQ257_17540 PF01402 Ribbon-helix-helix protein, copG family KQ257_17540 PF08753 NikR C terminal nickel binding domain KQ257_17545 PF01425 Amidase KQ257_17550 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ257_17555 PF00005 ABC transporter KQ257_17580 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KQ257_17595 PF05947 Type VI secretion system, TssF KQ257_17610 PF06761 Intracellular multiplication and human macrophage-killing KQ257_17610 PF06744 Type VI secretion protein IcmF C-terminal KQ257_17610 PF14331 ImcF-related N-terminal domain KQ257_17620 PF00691 OmpA family KQ257_17620 PF01389 OmpA-like transmembrane domain KQ257_17630 PF10431 C-terminal, D2-small domain, of ClpB protein KQ257_17630 PF17871 AAA lid domain KQ257_17630 PF00004 ATPase family associated with various cellular activities (AAA) KQ257_17630 PF07724 AAA domain (Cdc48 subfamily) KQ257_17635 PF06812 ImpA, N-terminal, type VI secretion system KQ257_17640 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KQ257_17660 PF03466 LysR substrate binding domain KQ257_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_17670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ257_17675 PF07690 Major Facilitator Superfamily KQ257_17690 PF02677 Epoxyqueuosine reductase QueH KQ257_17700 PF00376 MerR family regulatory protein KQ257_17700 PF09278 MerR, DNA binding KQ257_17710 PF00701 Dihydrodipicolinate synthetase family KQ257_17720 PF00392 Bacterial regulatory proteins, gntR family KQ257_17725 PF05544 Proline racemase KQ257_17730 PF01266 FAD dependent oxidoreductase KQ257_17740 PF04324 BFD-like [2Fe-2S] binding domain KQ257_17740 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_17750 PF00083 Sugar (and other) transporter KQ257_17755 PF00171 Aldehyde dehydrogenase family KQ257_17760 PF13520 Amino acid permease KQ257_17765 PF03313 Serine dehydratase alpha chain KQ257_17765 PF03315 Serine dehydratase beta chain KQ257_17770 PF00171 Aldehyde dehydrogenase family KQ257_17770 PF01575 MaoC like domain KQ257_17775 PF05138 Phenylacetic acid catabolic protein KQ257_17780 PF06243 Phenylacetic acid degradation B KQ257_17785 PF05138 Phenylacetic acid catabolic protein KQ257_17790 PF01883 Iron-sulfur cluster assembly protein KQ257_17795 PF00970 Oxidoreductase FAD-binding domain KQ257_17795 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ257_17795 PF00175 Oxidoreductase NAD-binding domain KQ257_17800 PF00378 Enoyl-CoA hydratase/isomerase KQ257_17805 PF00378 Enoyl-CoA hydratase/isomerase KQ257_17810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ257_17810 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ257_17810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ257_17815 PF00108 Thiolase, N-terminal domain KQ257_17815 PF02803 Thiolase, C-terminal domain KQ257_17820 PF14535 AMP-binding enzyme C-terminal domain KQ257_17820 PF00501 AMP-binding enzyme KQ257_17825 PF08223 PaaX-like protein C-terminal domain KQ257_17825 PF07848 PaaX-like protein KQ257_17830 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_17835 PF03061 Thioesterase superfamily KQ257_17845 PF13936 Helix-turn-helix domain KQ257_17845 PF00665 Integrase core domain KQ257_17880 PF13936 Helix-turn-helix domain KQ257_17880 PF00665 Integrase core domain KQ257_17905 PF02515 CoA-transferase family III KQ257_17910 PF00682 HMGL-like KQ257_17915 PF07690 Major Facilitator Superfamily KQ257_17920 PF00199 Catalase KQ257_17925 PF01292 Prokaryotic cytochrome b561 KQ257_17945 PF12697 Alpha/beta hydrolase family KQ257_17950 PF01613 Flavin reductase like domain KQ257_17955 PF00296 Luciferase-like monooxygenase KQ257_17960 PF00171 Aldehyde dehydrogenase family KQ257_17970 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ257_17980 PF00171 Aldehyde dehydrogenase family KQ257_17985 PF02627 Carboxymuconolactone decarboxylase family KQ257_17990 PF03466 LysR substrate binding domain KQ257_17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_17995 PF02525 Flavodoxin-like fold KQ257_18000 PF09339 IclR helix-turn-helix domain KQ257_18000 PF01614 Bacterial transcriptional regulator KQ257_18005 PF01494 FAD binding domain KQ257_18010 PF00842 Alanine racemase, C-terminal domain KQ257_18010 PF01168 Alanine racemase, N-terminal domain KQ257_18015 PF07702 UTRA domain KQ257_18015 PF00392 Bacterial regulatory proteins, gntR family KQ257_18025 PF08402 TOBE domain KQ257_18025 PF00005 ABC transporter KQ257_18030 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18035 PF01266 FAD dependent oxidoreductase KQ257_18040 PF00266 Aminotransferase class-V KQ257_18045 PF13419 Haloacid dehalogenase-like hydrolase KQ257_18050 PF07690 Major Facilitator Superfamily KQ257_18055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_18055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_18055 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_18060 PF02515 CoA-transferase family III KQ257_18065 PF09339 IclR helix-turn-helix domain KQ257_18070 PF00378 Enoyl-CoA hydratase/isomerase KQ257_18075 PF03060 Nitronate monooxygenase KQ257_18080 PF07690 Major Facilitator Superfamily KQ257_18085 PF09339 IclR helix-turn-helix domain KQ257_18090 PF00108 Thiolase, N-terminal domain KQ257_18090 PF02803 Thiolase, C-terminal domain KQ257_18095 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ257_18095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ257_18095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ257_18105 PF00378 Enoyl-CoA hydratase/isomerase KQ257_18110 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_18110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_18110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_18115 PF07690 Major Facilitator Superfamily KQ257_18120 PF01144 Coenzyme A transferase KQ257_18125 PF01144 Coenzyme A transferase KQ257_18135 PF07690 Major Facilitator Superfamily KQ257_18145 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_18145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_18145 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ257_18145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18160 PF03466 LysR substrate binding domain KQ257_18165 PF00682 HMGL-like KQ257_18170 PF02785 Biotin carboxylase C-terminal domain KQ257_18170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ257_18170 PF00289 Biotin carboxylase, N-terminal domain KQ257_18170 PF00364 Biotin-requiring enzyme KQ257_18170 PF18140 Propionyl-coenzyme A carboxylase BT domain KQ257_18175 PF00378 Enoyl-CoA hydratase/isomerase KQ257_18180 PF01039 Carboxyl transferase domain KQ257_18185 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_18185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ257_18185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_18190 PF00440 Bacterial regulatory proteins, tetR family KQ257_18195 PF00501 AMP-binding enzyme KQ257_18195 PF13193 AMP-binding enzyme C-terminal domain KQ257_18215 PF00872 Transposase, Mutator family KQ257_18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18225 PF03466 LysR substrate binding domain KQ257_18260 PF02464 Competence-damaged protein KQ257_18260 PF18146 Damage-inducible protein CinA KH domain KQ257_18260 PF00994 Probable molybdopterin binding domain KQ257_18270 PF18011 C-terminal domain found in long catalases KQ257_18270 PF06628 Catalase-related immune-responsive KQ257_18270 PF00199 Catalase KQ257_18295 PF00717 Peptidase S24-like KQ257_18305 PF13404 AsnC-type helix-turn-helix domain KQ257_18305 PF01037 Lrp/AsnC ligand binding domain KQ257_18315 PF00072 Response regulator receiver domain KQ257_18315 PF09308 LuxQ, periplasmic KQ257_18315 PF00512 His Kinase A (phospho-acceptor) domain KQ257_18315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ257_18320 PF00072 Response regulator receiver domain KQ257_18335 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18340 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18345 PF00005 ABC transporter KQ257_18350 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ257_18355 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ257_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18365 PF03466 LysR substrate binding domain KQ257_18370 PF01810 LysE type translocator KQ257_18375 PF00266 Aminotransferase class-V KQ257_18385 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_18390 PF00581 Rhodanese-like domain KQ257_18400 PF03466 LysR substrate binding domain KQ257_18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18405 PF02798 Glutathione S-transferase, N-terminal domain KQ257_18410 PF14834 Glutathione S-transferase, C-terminal domain KQ257_18410 PF02798 Glutathione S-transferase, N-terminal domain KQ257_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18415 PF03466 LysR substrate binding domain KQ257_18420 PF03788 LrgA family KQ257_18425 PF04172 LrgB-like family KQ257_18430 PF00392 Bacterial regulatory proteins, gntR family KQ257_18430 PF00155 Aminotransferase class I and II KQ257_18445 PF07690 Major Facilitator Superfamily KQ257_18455 PF03466 LysR substrate binding domain KQ257_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18460 PF16957 Malonate decarboxylase, alpha subunit, transporter KQ257_18465 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KQ257_18470 PF06857 Malonate decarboxylase delta subunit (MdcD) KQ257_18475 PF01039 Carboxyl transferase domain KQ257_18485 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KQ257_18490 PF00698 Acyl transferase domain KQ257_18505 PF03466 LysR substrate binding domain KQ257_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18510 PF00155 Aminotransferase class I and II KQ257_18510 PF00392 Bacterial regulatory proteins, gntR family KQ257_18520 PF02322 Cytochrome bd terminal oxidase subunit II KQ257_18525 PF01654 Cytochrome bd terminal oxidase subunit I KQ257_18535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_18535 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ257_18535 PF02770 Acyl-CoA dehydrogenase, middle domain KQ257_18540 PF00296 Luciferase-like monooxygenase KQ257_18545 PF00083 Sugar (and other) transporter KQ257_18555 PF13936 Helix-turn-helix domain KQ257_18555 PF00665 Integrase core domain KQ257_18560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ257_18565 PF00005 ABC transporter KQ257_18570 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18575 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KQ257_18580 PF01177 Asp/Glu/Hydantoin racemase KQ257_18585 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ257_18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18595 PF03466 LysR substrate binding domain KQ257_18605 PF01979 Amidohydrolase family KQ257_18605 PF13382 Adenine deaminase C-terminal domain KQ257_18615 PF03960 ArsC family KQ257_18620 PF01022 Bacterial regulatory protein, arsR family KQ257_18625 PF01758 Sodium Bile acid symporter family KQ257_18630 PF03466 LysR substrate binding domain KQ257_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ257_18645 PF13192 Thioredoxin domain KQ257_18660 PF00132 Bacterial transferase hexapeptide (six repeats) KQ257_18665 PF00588 SpoU rRNA Methylase family KQ257_18670 PF02811 PHP domain KQ257_18670 PF14579 Helix-hairpin-helix motif KQ257_18670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KQ257_18670 PF07733 Bacterial DNA polymerase III alpha NTPase domain KQ257_18670 PF01336 OB-fold nucleic acid binding domain KQ257_18675 PF00710 Asparaginase, N-terminal KQ257_18675 PF17763 Glutaminase/Asparaginase C-terminal domain KQ257_18680 PF00375 Sodium:dicarboxylate symporter family KQ257_18685 PF00155 Aminotransferase class I and II KQ257_18690 PF01641 SelR domain KQ257_18695 PF00255 Glutathione peroxidase KQ257_18705 PF00872 Transposase, Mutator family KQ257_18720 PF00155 Aminotransferase class I and II KQ257_18725 PF08335 GlnD PII-uridylyltransferase KQ257_18725 PF01966 HD domain KQ257_18725 PF01909 Nucleotidyltransferase domain KQ257_18730 PF02222 ATP-grasp domain KQ257_18740 PF05437 Branched-chain amino acid transport protein (AzlD) KQ257_18745 PF03591 AzlC protein KQ257_18770 PF01926 50S ribosome-binding GTPase KQ257_18770 PF06071 Protein of unknown function (DUF933) KQ257_18775 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18780 PF00005 ABC transporter KQ257_18780 PF09383 NIL domain KQ257_18785 PF03180 NLPA lipoprotein KQ257_18790 PF03180 NLPA lipoprotein KQ257_18795 PF00296 Luciferase-like monooxygenase KQ257_18805 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ257_18805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ257_18820 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18825 PF00528 Binding-protein-dependent transport system inner membrane component KQ257_18830 PF00005 ABC transporter KQ257_18840 PF01037 Lrp/AsnC ligand binding domain KQ257_18845 PF01709 Transcriptional regulator KQ257_18855 PF00440 Bacterial regulatory proteins, tetR family KQ257_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_18875 PF03466 LysR substrate binding domain KQ257_18885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ257_18895 PF00892 EamA-like transporter family KQ257_18915 PF13954 PapC N-terminal domain KQ257_18915 PF00577 Outer membrane usher protein KQ257_18915 PF13953 PapC C-terminal domain KQ257_18920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ257_18920 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ257_18925 PF16970 Type-1 fimbrial protein, A KQ257_18940 PF04055 Radical SAM superfamily KQ257_18940 PF06968 Biotin and Thiamin Synthesis associated domain KQ257_18945 PF08331 Domain of unknown function (DUF1730) KQ257_18950 PF03853 YjeF-related protein N-terminus KQ257_18950 PF01256 Carbohydrate kinase KQ257_18955 PF02075 Crossover junction endodeoxyribonuclease RuvC KQ257_18970 PF00905 Penicillin binding protein transpeptidase domain KQ257_19030 PF00565 Staphylococcal nuclease homologue KQ257_19035 PF00816 H-NS histone family KQ257_19080 PF02899 Phage integrase, N-terminal SAM-like domain KQ257_19080 PF00589 Phage integrase family KQ257_19085 PF13610 DDE domain KQ257_19090 PF13495 Phage integrase, N-terminal SAM-like domain KQ257_19090 PF00589 Phage integrase family KQ257_19095 PF10706 Aminoglycoside-2''-adenylyltransferase KQ257_19100 PF13610 DDE domain KQ257_19105 PF03466 LysR substrate binding domain KQ257_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ257_19110 PF07690 Major Facilitator Superfamily KQ257_19125 PF00809 Pterin binding enzyme KQ257_19130 PF02332 Methane/Phenol/Toluene Hydroxylase KQ257_19145 PF02796 Helix-turn-helix domain of resolvase KQ257_19145 PF00239 Resolvase, N terminal domain KQ257_19170 PF00962 Adenosine/AMP deaminase KQ257_19180 PF13005 zinc-finger binding domain of transposase IS66 KQ257_19180 PF13007 Transposase C of IS166 homeodomain KQ257_19180 PF03050 Transposase IS66 family KQ257_19180 PF13817 IS66 C-terminal element KQ257_19225 PF13614 AAA domain KQ257_19230 PF02195 ParB-like nuclease domain KQ257_19230 PF17762 HTH domain found in ParB protein KQ257_19245 PF05816 Toxic anion resistance protein (TelA) KQ257_19265 PF00905 Penicillin binding protein transpeptidase domain KQ257_19275 PF13737 Transposase DDE domain KQ257_19335 PF00684 DnaJ central domain KQ257_19335 PF00226 DnaJ domain KQ257_19335 PF01556 DnaJ C terminal domain KQ257_19370 PF08751 TrwC relaxase KQ257_19370 PF18340 DNA relaxase TraI 2B/2B-like domain KQ257_19370 PF07057 DNA helicase TraI KQ257_19370 PF18272 single-stranded DNA binding TraI N-terminal subdomain KQ257_19405 PF00239 Resolvase, N terminal domain KQ257_19405 PF02796 Helix-turn-helix domain of resolvase KQ257_19420 PF01464 Transglycosylase SLT domain KQ257_19455 PF13098 Thioredoxin-like domain KQ257_19455 PF10411 Disulfide bond isomerase protein N-terminus KQ257_19490 PF06834 TraU protein KQ257_19500 PF06986 Type-1V conjugative transfer system mating pair stabilisation KQ257_19515 PF06122 Conjugative relaxosome accessory transposon protein KQ257_19535 PF11799 impB/mucB/samB family C-terminal domain KQ257_19535 PF11798 IMS family HHH motif KQ257_19535 PF13438 Domain of unknown function (DUF4113) KQ257_19535 PF00817 impB/mucB/samB family KQ257_19545 PF13936 Helix-turn-helix domain KQ257_19545 PF00665 Integrase core domain KQ257_19565 PF01051 Initiator Replication protein KQ257_19580 PF13610 DDE domain KQ257_19595 PF02522 Aminoglycoside 3-N-acetyltransferase KQ257_19600 PF13610 DDE domain KQ257_19620 PF07715 TonB-dependent Receptor Plug Domain KQ257_19620 PF00593 TonB dependent receptor KQ257_19645 PF01051 Initiator Replication protein KQ257_19675 PF00313 'Cold-shock' DNA-binding domain KQ257_19700 PF13936 Helix-turn-helix domain KQ257_19700 PF00665 Integrase core domain