locus-tag	class	description
KQ257_00025	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
KQ257_00035	COG2353	YceI-like domain
KQ257_00045	COG3698	Phosphodiester glycosidase
KQ257_00060	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
KQ257_00065	COG0506	proline dehydrogenase activity
KQ257_00065	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
KQ257_00065	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
KQ257_00075	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
KQ257_00080	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
KQ257_00100	COG1132	(ABC) transporter
KQ257_00105	COG3122	Protein conserved in bacteria
KQ257_00110	COG3619	membrane
KQ257_00120	COG0640	Transcriptional regulator
KQ257_00130	COG2850	peptidyl-arginine hydroxylation
KQ257_00135	COG0424	maF-like protein
KQ257_00155	COG0191	fructose-bisphosphate aldolase activity
KQ257_00160	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KQ257_00175	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
KQ257_00185	COG1192	Involved in chromosome partitioning
KQ257_00190	COG1475	DNA binding
KQ257_00195	COG0811	peptide transport
KQ257_00205	COG1132	(ABC) transporter
KQ257_00210	COG1663	tetraacyldisaccharide 4'-kinase activity
KQ257_00230	COG0084	hydrolase, TatD family'
KQ257_00295	COG0776	regulation of translation
KQ257_00325	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
KQ257_00330	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
KQ257_00375	COG0339	signal peptide processing
KQ257_00385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
KQ257_00420	COG0702	epimerase
KQ257_00425	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KQ257_00445	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
KQ257_00475	COG0316	Belongs to the HesB IscA family
KQ257_00480	COG0822	iron-sulfur transferase activity
KQ257_00505	COG0776	regulation of translation
KQ257_00510	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
KQ257_00515	COG2207	Transcriptional regulator
KQ257_00520	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KQ257_00525	COG1960	acyl-CoA dehydrogenase activity
KQ257_00530	COG1960	acyl-CoA dehydrogenase activity
KQ257_00545	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
KQ257_00565	COG4264	IucA IucC family
KQ257_00570	COG4264	IucA IucC family
KQ257_00580	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KQ257_00610	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
KQ257_00625	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
KQ257_00645	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
KQ257_00650	COG0730	response to heat
KQ257_00670	COG4773	Receptor
KQ257_00675	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
KQ257_00690	COG1131	(ABC) transporter
KQ257_00695	COG0842	Transport permease protein
KQ257_00700	COG0842	Transport permease protein
KQ257_00755	COG2226	methyltransferase
KQ257_00780	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
KQ257_00815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KQ257_00825	COG0133	tryptophan synthase activity
KQ257_00840	COG3706	GGDEF domain
KQ257_00855	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
KQ257_00860	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
KQ257_00865	COG0022	dehydrogenase e1 component
KQ257_00870	COG0508	dehydrogenase complex catalyzes the overall conversion of
KQ257_00875	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KQ257_00885	COG1063	alcohol dehydrogenase
KQ257_00890	COG3781	membrane
KQ257_00900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
KQ257_00900	COG3453	Protein conserved in bacteria
KQ257_00910	COG0730	response to heat
KQ257_00925	COG3708	Transcriptional regulator
KQ257_00925	COG2207	Transcriptional regulator
KQ257_00930	COG1733	regulation of RNA biosynthetic process
KQ257_00935	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
KQ257_00945	COG2188	Transcriptional regulator
KQ257_00960	COG4521	taurine ABC transporter
KQ257_00965	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KQ257_00985	COG0477	Major facilitator Superfamily
KQ257_00995	COG1027	Aspartate ammonia-lyase
KQ257_01010	COG0583	DNA-binding transcription factor activity
KQ257_01015	COG0583	DNA-binding transcription factor activity
KQ257_01020	COG0183	Belongs to the thiolase family
KQ257_01025	COG2031	fatty acid transporter
KQ257_01040	COG0583	DNA-binding transcription factor activity
KQ257_01060	COG1309	transcriptional regulator
KQ257_01070	COG2610	gluconate transmembrane transporter activity
KQ257_01075	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_01080	COG2207	Transcriptional regulator
KQ257_01095	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_01105	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KQ257_01120	COG0543	2 iron, 2 sulfur cluster binding
KQ257_01120	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KQ257_01125	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
KQ257_01130	COG4638	Rieske (2fe-2S)
KQ257_01140	COG0725	ABC transporter, periplasmic molybdate-binding protein
KQ257_01145	COG4149	molybdate abc transporter
KQ257_01150	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
KQ257_01155	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_01160	COG3433	isochorismatase activity
KQ257_01160	COG1535	isochorismatase
KQ257_01220	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KQ257_01235	COG0753	catalase activity
KQ257_01245	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
KQ257_01280	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
KQ257_01285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KQ257_01290	COG0745	RESPONSE REGULATOR receiver
KQ257_01295	COG2205	protein histidine kinase activity
KQ257_01305	COG2207	Transcriptional regulator
KQ257_01320	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_01365	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
KQ257_01450	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
KQ257_01470	COG1120	ATPase activity
KQ257_01475	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KQ257_01480	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
KQ257_01485	COG1064	alcohol dehydrogenase
KQ257_01490	COG2207	Transcriptional regulator
KQ257_01495	COG2084	Dehydrogenase
KQ257_01505	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
KQ257_01510	COG0583	DNA-binding transcription factor activity
KQ257_01520	COG0129	dihydroxy-acid dehydratase activity
KQ257_01540	COG1566	PFAM secretion protein HlyD family protein
KQ257_01550	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
KQ257_01580	COG0583	DNA-binding transcription factor activity
KQ257_01595	COG2188	Transcriptional regulator
KQ257_01655	COG1473	amidohydrolase
KQ257_01665	COG0475	glutathione-regulated potassium exporter activity
KQ257_01665	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
KQ257_01675	COG0583	DNA-binding transcription factor activity
KQ257_01680	COG1335	isochorismatase
KQ257_01690	COG1309	transcriptional regulator
KQ257_01715	COG0789	Transcriptional regulator
KQ257_01730	COG0446	pyridine nucleotide-disulphide oxidoreductase
KQ257_01730	COG1902	pentaerythritol trinitrate reductase activity
KQ257_01745	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_01765	COG2186	Transcriptional regulator
KQ257_01775	COG0583	DNA-binding transcription factor activity
KQ257_01780	COG4948	Mandelate Racemase Muconate Lactonizing
KQ257_01785	COG4829	muconolactone delta-isomerase
KQ257_01795	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
KQ257_01800	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KQ257_01805	COG0183	Belongs to the thiolase family
KQ257_01810	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
KQ257_01820	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_01830	COG3733	amine oxidase
KQ257_01840	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KQ257_01850	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_01860	COG4638	Rieske (2fe-2S)
KQ257_01880	COG0154	amidase activity
KQ257_01890	COG2814	Major facilitator Superfamily
KQ257_01915	COG1960	acyl-CoA dehydrogenase activity
KQ257_01920	COG0583	DNA-binding transcription factor activity
KQ257_01925	COG1414	Transcriptional regulator
KQ257_01940	COG2391	methyltransferase activity
KQ257_01950	COG4993	Dehydrogenase
KQ257_01955	COG3659	wide pore channel activity
KQ257_01960	COG3420	alginic acid biosynthetic process
KQ257_01965	COG0710	3-dehydroquinate dehydratase activity
KQ257_01970	COG3485	protocatechuate 3,4-dioxygenase
KQ257_01975	COG3485	protocatechuate 3,4-dioxygenase
KQ257_01980	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
KQ257_01985	COG2271	Major facilitator Superfamily
KQ257_01990	COG0596	Alpha beta hydrolase
KQ257_01995	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
KQ257_02000	COG0183	Belongs to the thiolase family
KQ257_02005	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KQ257_02010	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
KQ257_02020	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
KQ257_02025	COG2323	membrane
KQ257_02070	COG1902	pentaerythritol trinitrate reductase activity
KQ257_02070	COG0446	pyridine nucleotide-disulphide oxidoreductase
KQ257_02095	COG0542	response to heat
KQ257_02100	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
KQ257_02130	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
KQ257_02135	COG0569	domain protein
KQ257_02140	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
KQ257_02155	COG4774	siderophore transport
KQ257_02160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
KQ257_02170	COG1585	Membrane protein implicated in regulation of membrane protease activity
KQ257_02185	COG1294	oxidase, subunit
KQ257_02190	COG4890	Cyd operon protein YbgT
KQ257_02205	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
KQ257_02215	COG0552	protein localization to endoplasmic reticulum
KQ257_02240	COG0517	IMP dehydrogenase activity
KQ257_02240	COG0516	GMP reductase activity
KQ257_02245	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
KQ257_02250	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
KQ257_02260	COG0583	DNA-binding transcription factor activity
KQ257_02265	COG0024	Methionine aminopeptidase
KQ257_02295	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
KQ257_02295	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
KQ257_02300	COG1105	Belongs to the carbohydrate kinase PfkB family
KQ257_02305	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
KQ257_02305	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
KQ257_02305	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
KQ257_02320	COG3300	MHYT domain
KQ257_02320	COG5001	Diguanylate cyclase
KQ257_02340	COG3328	transposase activity
KQ257_02350	COG0659	secondary active sulfate transmembrane transporter activity
KQ257_02365	COG1113	amino acid transport
KQ257_02375	COG1522	sequence-specific DNA binding
KQ257_02400	COG1011	Hydrolase
KQ257_02405	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
KQ257_02415	COG2137	regulation of response to DNA damage stimulus
KQ257_02430	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
KQ257_02450	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
KQ257_02465	COG0575	Belongs to the CDS family
KQ257_02470	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
KQ257_02490	COG3852	Histidine kinase
KQ257_02495	COG2204	response regulator
KQ257_02550	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
KQ257_02555	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
KQ257_02575	COG0697	spore germination
KQ257_02580	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KQ257_02590	COG0303	'Molybdopterin
KQ257_02595	COG0315	cyclic pyranopterin monophosphate synthase activity
KQ257_02595	COG0521	Mo-molybdopterin cofactor biosynthetic process
KQ257_02610	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
KQ257_02615	COG0243	molybdopterin cofactor binding
KQ257_02625	COG0243	molybdopterin cofactor binding
KQ257_02630	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
KQ257_02635	COG2146	nitrite reductase [NAD(P)H] activity
KQ257_02635	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
KQ257_02645	COG0745	RESPONSE REGULATOR receiver
KQ257_02650	COG1116	anion transmembrane transporter activity
KQ257_02650	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KQ257_02670	COG0511	ligase activity, forming carbon-carbon bonds
KQ257_02685	COG2814	Major facilitator Superfamily
KQ257_02705	COG1278	Cold shock
KQ257_02730	COG3179	chitinase
KQ257_02765	COG3293	Transposase
KQ257_02770	COG0739	heme binding
KQ257_02795	COG1598	PFAM Uncharacterised protein family UPF0150
KQ257_02900	COG3293	Transposase
KQ257_02955	COG3328	transposase activity
KQ257_03125	COG0069	glutamate synthase activity
KQ257_03145	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
KQ257_03155	COG1454	alcohol dehydrogenase
KQ257_03160	COG0824	Thioesterase
KQ257_03175	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KQ257_03190	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
KQ257_03195	COG2030	dehydratase
KQ257_03205	COG0183	Belongs to the thiolase family
KQ257_03215	COG0583	DNA-binding transcription factor activity
KQ257_03220	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
KQ257_03230	COG1522	sequence-specific DNA binding
KQ257_03270	COG0589	response to stress
KQ257_03275	COG0488	(ABC) transporter
KQ257_03295	COG4773	Receptor
KQ257_03325	COG0668	transmembrane transport
KQ257_03335	COG1309	transcriptional regulator
KQ257_03350	COG1605	Chorismate mutase
KQ257_03390	COG0308	aminopeptidase N
KQ257_03410	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
KQ257_03420	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
KQ257_03425	COG1454	alcohol dehydrogenase
KQ257_03445	COG0531	amino acid
KQ257_03450	COG4303	Ethanolamine ammonia lyase large subunit
KQ257_03455	COG4302	ethanolamine ammonia-lyase activity
KQ257_03460	COG0519	Catalyzes the synthesis of GMP from XMP
KQ257_03460	COG0518	GMP synthase (glutamine-hydrolyzing) activity
KQ257_03465	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KQ257_03490	COG0697	spore germination
KQ257_03495	COG1923	regulation of RNA biosynthetic process
KQ257_03505	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
KQ257_03510	COG0802	atpase or kinase
KQ257_03530	COG1187	pseudouridine synthase activity
KQ257_03545	COG0583	DNA-binding transcription factor activity
KQ257_03565	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
KQ257_03590	COG0729	surface antigen
KQ257_03610	COG0174	glutamine synthetase
KQ257_03615	COG0745	RESPONSE REGULATOR receiver
KQ257_03620	COG2205	protein histidine kinase activity
KQ257_03630	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
KQ257_03635	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
KQ257_03660	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KQ257_03665	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
KQ257_03670	COG1960	acyl-CoA dehydrogenase activity
KQ257_03685	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KQ257_03690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KQ257_03710	COG0583	DNA-binding transcription factor activity
KQ257_03725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KQ257_03735	COG3658	cytochrome
KQ257_03740	COG1215	transferase activity, transferring glycosyl groups
KQ257_03745	COG0726	polysaccharide deacetylase
KQ257_03745	COG1649	PFAM Uncharacterised BCR, COG1649
KQ257_03770	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
KQ257_03785	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
KQ257_03810	COG0305	Participates in initiation and elongation during chromosome replication
KQ257_03815	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
KQ257_03825	COG1305	Transglutaminase-like
KQ257_03835	COG2308	Evidence 4 Homologs of previously reported genes of
KQ257_03865	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
KQ257_03870	COG0138	bifunctional purine biosynthesis protein purh
KQ257_03875	COG0151	Belongs to the GarS family
KQ257_03880	COG1464	Belongs to the NlpA lipoprotein family
KQ257_03885	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
KQ257_03890	COG2011	ABC-type metal ion transport system permease component
KQ257_03895	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
KQ257_03905	COG1301	dicarboxylic acid transport
KQ257_03935	COG1794	racemase activity, acting on amino acids and derivatives
KQ257_03945	COG3008	intermembrane lipid transfer
KQ257_03945	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
KQ257_03950	COG2995	paraquat-inducible protein a
KQ257_03980	COG1051	belongs to the nudix hydrolase family
KQ257_03985	COG0477	Major facilitator Superfamily
KQ257_04035	COG2186	Transcriptional regulator
KQ257_04045	COG0786	glutamate:sodium symporter activity
KQ257_04050	COG3243	poly(R)-hydroxyalkanoic acid synthase
KQ257_04075	COG3111	PFAM Bacterial OB fold (BOF) protein
KQ257_04145	COG0515	serine threonine protein kinase
KQ257_04145	COG2815	serine threonine protein kinase
KQ257_04175	COG1610	YqeY-like protein
KQ257_04180	COG4783	chaperone-mediated protein folding
KQ257_04205	COG1286	toxin biosynthetic process
KQ257_04235	COG0778	Nitroreductase
KQ257_04245	COG0513	Belongs to the DEAD box helicase family
KQ257_04265	COG2363	Small membrane protein
KQ257_04295	COG1234	tRNA 3'-trailer cleavage
KQ257_04300	COG2195	Cleaves the N-terminal amino acid of tripeptides
KQ257_04310	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
KQ257_04320	COG2819	hydrolase of the alpha beta superfamily
KQ257_04325	COG1960	acyl-CoA dehydrogenase activity
KQ257_04330	COG1301	dicarboxylic acid transport
KQ257_04335	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
KQ257_04340	COG3139	Protein of unknown function (DUF1315)
KQ257_04345	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
KQ257_04350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
KQ257_04360	COG0494	nUDIX hydrolase
KQ257_04370	COG0642	Histidine kinase
KQ257_04385	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
KQ257_04395	COG1720	tRNA m6t6A37 methyltransferase activity
KQ257_04410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KQ257_04415	COG0826	peptidase U32
KQ257_04420	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
KQ257_04430	COG4598	ABC transporter
KQ257_04435	COG4160	amino acid transport
KQ257_04440	COG4215	(ABC) transporter
KQ257_04455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KQ257_04545	COG3561	AntA/AntB antirepressor
KQ257_04645	COG0653	protein targeting
KQ257_04655	COG3728	DNA packaging
KQ257_04840	COG0582	viral genome integration into host DNA
KQ257_04845	COG1131	(ABC) transporter
KQ257_04850	COG0842	Transport permease protein
KQ257_04865	COG0772	Belongs to the SEDS family
KQ257_04870	COG2951	lytic endotransglycosylase activity
KQ257_04895	COG2207	Transcriptional regulator
KQ257_04910	COG0052	Belongs to the universal ribosomal protein uS2 family
KQ257_04915	COG0024	Methionine aminopeptidase
KQ257_04925	COG2223	nitrite transmembrane transporter activity
KQ257_04935	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KQ257_04940	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
KQ257_04945	COG1960	acyl-CoA dehydrogenase activity
KQ257_04960	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
KQ257_04965	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
KQ257_04970	COG1385	rRNA (uridine-N3-)-methyltransferase activity
KQ257_04980	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_05000	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KQ257_05005	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
KQ257_05010	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
KQ257_05045	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
KQ257_05055	COG0174	glutamine synthetase
KQ257_05070	COG0512	Glutamine amidotransferase of anthranilate synthase
KQ257_05075	COG0308	aminopeptidase N
KQ257_05105	COG1529	Aldehyde oxidase and xanthine dehydrogenase
KQ257_05115	COG0302	gtp cyclohydrolase
KQ257_05140	COG3739	integral membrane protein
KQ257_05155	COG1169	isochorismate synthase
KQ257_05165	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
KQ257_05170	COG1132	(ABC) transporter
KQ257_05175	COG1132	(ABC) transporter
KQ257_05190	COG3433	isochorismatase activity
KQ257_05190	COG1535	isochorismatase
KQ257_05195	COG1021	2,3-dihydroxybenzoate-AMP ligase
KQ257_05200	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
KQ257_05210	COG4774	siderophore transport
KQ257_05215	COG4607	ABC-type enterochelin transport system periplasmic component
KQ257_05220	COG4604	ABC transporter, ATP-binding protein
KQ257_05225	COG4605	iron ion homeostasis
KQ257_05230	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KQ257_05235	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
KQ257_05250	COG2964	Protein conserved in bacteria
KQ257_05260	COG1741	Belongs to the pirin family
KQ257_05285	COG3328	transposase activity
KQ257_05305	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
KQ257_05315	COG0596	Alpha beta hydrolase
KQ257_05330	COG0583	DNA-binding transcription factor activity
KQ257_05335	COG1335	isochorismatase
KQ257_05365	COG3328	transposase activity
KQ257_05380	COG2879	small protein
KQ257_05385	COG1966	Carbon starvation protein
KQ257_05405	COG4943	cyclic-guanylate-specific phosphodiesterase activity
KQ257_05430	COG1067	ATP-dependent peptidase activity
KQ257_05435	COG0583	DNA-binding transcription factor activity
KQ257_05460	COG1686	Belongs to the peptidase S11 family
KQ257_05465	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
KQ257_05500	COG0616	signal peptide processing
KQ257_05505	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
KQ257_05515	COG0573	inorganic phosphate transmembrane transporter activity
KQ257_05520	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
KQ257_05525	COG1113	amino acid transport
KQ257_05530	COG3961	Belongs to the TPP enzyme family
KQ257_05535	COG1522	sequence-specific DNA binding
KQ257_05545	COG0076	glutamate decarboxylase activity
KQ257_05550	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
KQ257_05565	COG2249	NAD(P)H dehydrogenase (quinone) activity
KQ257_05575	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KQ257_05610	COG0352	thiamine-phosphate diphosphorylase activity
KQ257_05635	COG0612	Peptidase, M16
KQ257_05645	COG1823	symporter activity
KQ257_05650	COG0583	DNA-binding transcription factor activity
KQ257_05655	COG0477	Major facilitator Superfamily
KQ257_05680	COG1187	pseudouridine synthase activity
KQ257_05695	COG1686	Belongs to the peptidase S11 family
KQ257_05700	COG1252	NADH dehydrogenase
KQ257_05710	COG0415	Belongs to the DNA photolyase family
KQ257_05725	COG1215	transferase activity, transferring glycosyl groups
KQ257_05755	COG2070	2-Nitropropane dioxygenase
KQ257_05810	COG0556	nucleotide-excision repair
KQ257_05830	COG0436	Aminotransferase
KQ257_05860	COG4221	oxidoreductase activity
KQ257_05870	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
KQ257_05875	COG1381	Involved in DNA repair and RecF pathway recombination
KQ257_05885	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
KQ257_05900	COG0681	Belongs to the peptidase S26 family
KQ257_05915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KQ257_05935	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
KQ257_05940	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
KQ257_05945	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
KQ257_05955	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
KQ257_05960	COG4208	sulfate ABC transporter
KQ257_05965	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
KQ257_05970	COG0583	DNA-binding transcription factor activity
KQ257_05975	COG4625	pathogenesis
KQ257_05990	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
KQ257_06005	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
KQ257_06015	COG1056	cytidyltransferase-related domain
KQ257_06015	COG1051	belongs to the nudix hydrolase family
KQ257_06020	COG1024	Enoyl-CoA hydratase
KQ257_06030	COG2814	Major facilitator Superfamily
KQ257_06035	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
KQ257_06035	COG0047	phosphoribosylformylglycinamidine synthase activity
KQ257_06055	COG1473	amidohydrolase
KQ257_06060	COG0824	Thioesterase
KQ257_06080	COG0823	Involved in the tonB-independent uptake of proteins
KQ257_06100	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KQ257_06135	COG0628	permease
KQ257_06145	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
KQ257_06150	COG0596	Alpha beta hydrolase
KQ257_06155	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
KQ257_06155	COG0616	signal peptide processing
KQ257_06165	COG0658	competence protein
KQ257_06165	COG2333	competence protein COMEC
KQ257_06170	COG1136	(ABC) transporter
KQ257_06175	COG4591	ABC-type transport system involved in lipoprotein release permease component
KQ257_06210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KQ257_06230	COG0463	Glycosyl transferase, family 2
KQ257_06260	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
KQ257_06265	COG1280	lysine exporter protein (LysE YggA)
KQ257_06275	COG0019	diaminopimelate decarboxylase activity
KQ257_06285	COG1113	amino acid transport
KQ257_06300	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
KQ257_06310	COG3339	Conserved Protein
KQ257_06315	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
KQ257_06320	COG0243	molybdopterin cofactor binding
KQ257_06325	COG1929	Belongs to the glycerate kinase type-1 family
KQ257_06340	COG0778	Nitroreductase
KQ257_06360	COG3811	Belongs to the UPF0386 family
KQ257_06375	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_06395	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
KQ257_06415	COG0741	lytic transglycosylase activity
KQ257_06435	COG0584	glycerophosphoryl diester phosphodiesterase
KQ257_06440	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
KQ257_06465	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
KQ257_06470	COG1597	lipid kinase activity
KQ257_06485	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
KQ257_06490	COG0477	Major facilitator Superfamily
KQ257_06540	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
KQ257_06545	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KQ257_06570	COG0505	Belongs to the CarA family
KQ257_06585	COG1309	transcriptional regulator
KQ257_06590	COG0251	oxidation-reduction process
KQ257_06600	COG0589	response to stress
KQ257_06615	COG2843	Capsule synthesis protein
KQ257_06635	COG2321	neutral zinc metallopeptidase
KQ257_06640	COG2354	Protein conserved in bacteria
KQ257_06660	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KQ257_06685	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
KQ257_06690	COG1053	succinate dehydrogenase
KQ257_06695	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
KQ257_06700	COG2009	succinate dehydrogenase
KQ257_06735	COG2921	Belongs to the UPF0250 family
KQ257_06740	COG0321	lipoyl(octanoyl) transferase activity
KQ257_06755	COG0531	amino acid
KQ257_06770	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
KQ257_06775	COG1648	precorrin-2 dehydrogenase activity
KQ257_06775	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
KQ257_06790	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
KQ257_06820	COG0671	phosphoesterase, PA-phosphatase related
KQ257_06825	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KQ257_06835	COG1538	Outer membrane efflux protein
KQ257_06840	COG0393	Putative heavy-metal-binding
KQ257_06845	COG0393	Putative heavy-metal-binding
KQ257_06855	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_06865	COG0525	valine-tRNA ligase activity
KQ257_06885	COG0583	DNA-binding transcription factor activity
KQ257_06890	COG0004	ammonium transporteR
KQ257_06900	COG0642	Histidine kinase
KQ257_06905	COG0745	RESPONSE REGULATOR receiver
KQ257_06910	COG2194	sulfuric ester hydrolase activity
KQ257_06930	COG1752	Esterase of the alpha-beta hydrolase superfamily
KQ257_06945	COG2315	Protein conserved in bacteria
KQ257_06950	COG0142	geranyltranstransferase activity
KQ257_06955	COG2828	Protein conserved in bacteria
KQ257_06960	COG1113	amino acid transport
KQ257_06980	COG2207	Transcriptional regulator
KQ257_07005	COG2249	NAD(P)H dehydrogenase (quinone) activity
KQ257_07015	COG0560	Phosphoserine phosphatase
KQ257_07025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
KQ257_07035	COG1530	ribonuclease E activity
KQ257_07040	COG0424	maF-like protein
KQ257_07045	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
KQ257_07050	COG1792	Involved in formation and maintenance of cell shape
KQ257_07055	COG1077	Cell shape determining protein MreB Mrl
KQ257_07060	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KQ257_07070	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KQ257_07095	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
KQ257_07100	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
KQ257_07105	COG1752	Esterase of the alpha-beta hydrolase superfamily
KQ257_07110	COG1115	amino acid carrier protein
KQ257_07130	COG2814	Major facilitator Superfamily
KQ257_07135	COG1289	transmembrane transporter activity
KQ257_07145	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
KQ257_07185	COG1376	ErfK ybiS ycfS ynhG family protein
KQ257_07190	COG2832	Protein of unknown function (DUF454)
KQ257_07200	COG5510	response to toxic substance
KQ257_07215	COG0635	Involved in the biosynthesis of porphyrin-containing compound
KQ257_07230	COG0840	transmembrane signaling receptor activity
KQ257_07270	COG3422	double-strand break repair
KQ257_07275	COG2824	Alkylphosphonate utilization operon protein PhnA
KQ257_07280	COG3189	MarR family transcriptional regulator
KQ257_07290	COG0354	folic acid binding
KQ257_07295	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
KQ257_07305	COG0679	Auxin Efflux Carrier
KQ257_07310	COG1902	pentaerythritol trinitrate reductase activity
KQ257_07315	COG4772	TonB-dependent receptor
KQ257_07320	COG2094	Belongs to the DNA glycosylase MPG family
KQ257_07345	COG1217	gtp-binding protein TYPA
KQ257_07350	COG2233	PERMEase
KQ257_07360	COG0833	amino acid
KQ257_07365	COG1690	Belongs to the RtcB family
KQ257_07375	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
KQ257_07375	COG2885	chlorophyll binding
KQ257_07385	COG0183	Belongs to the thiolase family
KQ257_07405	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
KQ257_07425	COG2207	Transcriptional regulator
KQ257_07430	COG0183	Belongs to the thiolase family
KQ257_07460	COG1272	protein, Hemolysin III
KQ257_07465	COG0477	Major facilitator Superfamily
KQ257_07480	COG0450	alkyl hydroperoxide reductase
KQ257_07500	COG0285	dihydrofolate synthase activity
KQ257_07550	COG2096	Adenosyltransferase
KQ257_07570	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
KQ257_07575	COG0745	RESPONSE REGULATOR receiver
KQ257_07580	COG2205	protein histidine kinase activity
KQ257_07590	COG1960	acyl-CoA dehydrogenase activity
KQ257_07595	COG1960	acyl-CoA dehydrogenase activity
KQ257_07640	COG0438	transferase activity, transferring glycosyl groups
KQ257_07645	COG1215	transferase activity, transferring glycosyl groups
KQ257_07650	COG0438	transferase activity, transferring glycosyl groups
KQ257_07670	COG0438	transferase activity, transferring glycosyl groups
KQ257_07675	COG0726	polysaccharide deacetylase
KQ257_07690	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
KQ257_07695	COG2205	protein histidine kinase activity
KQ257_07725	COG1862	Preprotein translocase
KQ257_07735	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
KQ257_07740	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
KQ257_07750	COG3781	membrane
KQ257_07755	COG0613	PHP domain protein
KQ257_07765	COG2350	Protein conserved in bacteria
KQ257_07795	COG1607	acyl-coa hydrolase
KQ257_07860	COG3293	Transposase
KQ257_07875	COG1408	metallophosphoesterase
KQ257_07880	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KQ257_07890	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
KQ257_07910	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
KQ257_07915	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
KQ257_07920	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
KQ257_07930	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KQ257_07940	COG2969	positive regulation of protein catabolic process
KQ257_07960	COG1960	acyl-CoA dehydrogenase activity
KQ257_07965	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
KQ257_07980	COG1309	transcriptional regulator
KQ257_07985	COG1960	acyl-CoA dehydrogenase activity
KQ257_08030	COG1183	phosphatidylcholine synthase activity
KQ257_08035	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
KQ257_08065	COG0739	heme binding
KQ257_08065	COG0741	lytic transglycosylase activity
KQ257_08065	COG1196	nuclear chromosome segregation
KQ257_08075	COG1702	phosphate starvation-inducible protein PhoH
KQ257_08110	COG1295	ribonuclease BN
KQ257_08115	COG0697	spore germination
KQ257_08120	COG2169	Transcriptional regulator
KQ257_08125	COG0179	Fumarylacetoacetate (FAA) hydrolase
KQ257_08170	COG0557	exoribonuclease II activity
KQ257_08175	COG0339	signal peptide processing
KQ257_08180	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
KQ257_08210	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
KQ257_08215	COG1960	acyl-CoA dehydrogenase activity
KQ257_08370	COG0626	cystathionine gamma-synthase activity
KQ257_08375	COG0433	COG0433 Predicted ATPase
KQ257_08380	COG1017	nitric oxide dioxygenase activity
KQ257_08380	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KQ257_08385	COG1959	2 iron, 2 sulfur cluster binding
KQ257_08400	COG1301	dicarboxylic acid transport
KQ257_08405	COG1946	Acyl-CoA thioesterase
KQ257_08425	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
KQ257_08430	COG1040	competence protein
KQ257_08435	COG0494	nUDIX hydrolase
KQ257_08445	COG0598	Magnesium transport protein CorA
KQ257_08455	COG2854	intermembrane phospholipid transfer
KQ257_08465	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
KQ257_08470	COG1127	ABC transporter
KQ257_08480	COG0513	Belongs to the DEAD box helicase family
KQ257_08500	COG0408	coproporphyrinogen oxidase activity
KQ257_08515	COG3293	Transposase
KQ257_08525	COG1960	acyl-CoA dehydrogenase activity
KQ257_08535	COG1983	PspC domain protein
KQ257_08540	COG0517	IMP dehydrogenase activity
KQ257_08590	COG0583	DNA-binding transcription factor activity
KQ257_08630	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_08640	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
KQ257_08645	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
KQ257_08650	COG0833	amino acid
KQ257_08680	COG1192	Involved in chromosome partitioning
KQ257_08685	COG0628	permease
KQ257_08695	COG1289	transmembrane transporter activity
KQ257_08710	COG2249	NAD(P)H dehydrogenase (quinone) activity
KQ257_08715	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
KQ257_08725	COG0277	FAD linked oxidase domain protein
KQ257_08730	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
KQ257_08755	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
KQ257_08760	COG5380	lipid catabolic process
KQ257_08780	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
KQ257_08830	COG0194	GDP metabolic process
KQ257_08845	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
KQ257_08865	COG3307	-O-antigen
KQ257_08890	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
KQ257_08895	COG1704	LemA family
KQ257_08905	COG0493	'glutamate synthase
KQ257_08910	COG0069	glutamate synthase activity
KQ257_08910	COG0067	glutamate synthase
KQ257_08910	COG0070	glutamate synthase
KQ257_08960	COG2226	methyltransferase
KQ257_08975	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
KQ257_08980	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
KQ257_09025	COG0833	amino acid
KQ257_09110	COG0488	(ABC) transporter
KQ257_09115	COG2873	o-acetylhomoserine
KQ257_09120	COG4221	oxidoreductase activity
KQ257_09125	COG0659	secondary active sulfate transmembrane transporter activity
KQ257_09150	COG0427	acetyl-CoA hydrolase
KQ257_09180	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
KQ257_09200	COG1132	(ABC) transporter
KQ257_09215	COG2329	Antibiotic biosynthesis monooxygenase
KQ257_09230	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
KQ257_09305	COG2249	NAD(P)H dehydrogenase (quinone) activity
KQ257_09310	COG1733	regulation of RNA biosynthetic process
KQ257_09350	COG0667	Aldo Keto reductase
KQ257_09370	COG0583	DNA-binding transcription factor activity
KQ257_09375	COG2814	Major facilitator Superfamily
KQ257_09405	COG1335	isochorismatase
KQ257_09415	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_09420	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
KQ257_09430	COG1113	amino acid transport
KQ257_09440	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
KQ257_09455	COG2814	Major facilitator Superfamily
KQ257_09465	COG0351	phosphomethylpyrimidine kinase
KQ257_09465	COG0352	thiamine-phosphate diphosphorylase activity
KQ257_09465	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
KQ257_09485	COG1309	transcriptional regulator
KQ257_09490	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
KQ257_09505	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
KQ257_09515	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
KQ257_09520	COG3162	membrane
KQ257_09525	COG2205	protein histidine kinase activity
KQ257_09525	COG0784	Response regulator, receiver
KQ257_09525	COG2198	Histidine kinase
KQ257_09550	COG1522	sequence-specific DNA binding
KQ257_09555	COG1335	isochorismatase
KQ257_09560	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
KQ257_09570	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_09580	COG0668	transmembrane transport
KQ257_09585	COG1385	rRNA (uridine-N3-)-methyltransferase activity
KQ257_09590	COG1519	Transferase
KQ257_09595	COG1902	pentaerythritol trinitrate reductase activity
KQ257_09615	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
KQ257_09640	COG0426	domain, Protein
KQ257_09640	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KQ257_09645	COG4774	siderophore transport
KQ257_09650	COG2119	membrane
KQ257_09660	COG0508	dehydrogenase complex catalyzes the overall conversion of
KQ257_09670	COG4942	peptidase
KQ257_09685	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
KQ257_09695	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
KQ257_09715	COG0189	ligase activity
KQ257_09735	COG0708	Exodeoxyribonuclease III
KQ257_09740	COG1393	Belongs to the ArsC family
KQ257_09755	COG3706	GGDEF domain
KQ257_09790	COG2351	hydroxyisourate hydrolase activity
KQ257_09795	COG2233	PERMEase
KQ257_09805	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KQ257_09815	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
KQ257_09820	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_09830	COG3150	esterase
KQ257_09865	COG2918	glutathione biosynthetic process
KQ257_09880	COG2733	membrane
KQ257_09885	COG0436	Aminotransferase
KQ257_09890	COG0534	Mate efflux family protein
KQ257_09950	COG0753	catalase activity
KQ257_09995	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
KQ257_10000	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
KQ257_10010	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
KQ257_10015	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
KQ257_10030	COG0010	Belongs to the arginase family
KQ257_10060	COG2188	Transcriptional regulator
KQ257_10070	COG3293	Transposase
KQ257_10075	COG0523	cobalamin synthesis protein
KQ257_10085	COG1113	amino acid transport
KQ257_10095	COG0625	glutathione transferase activity
KQ257_10115	COG1683	Conserved Protein
KQ257_10120	COG0534	Mate efflux family protein
KQ257_10125	COG0385	Bile acid
KQ257_10130	COG1335	isochorismatase
KQ257_10135	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KQ257_10155	COG2116	formate transmembrane transporter activity
KQ257_10160	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
KQ257_10165	COG2133	pyrroloquinoline quinone binding
KQ257_10170	COG2983	Belongs to the UPF0260 family
KQ257_10180	COG0400	carboxylic ester hydrolase activity
KQ257_10190	COG1194	a g-specific adenine glycosylase
KQ257_10205	COG2818	Glycosylase
KQ257_10210	COG1064	alcohol dehydrogenase
KQ257_10215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KQ257_10230	COG0583	DNA-binding transcription factor activity
KQ257_10235	COG0656	L-ascorbic acid biosynthetic process
KQ257_10240	COG2814	Major facilitator Superfamily
KQ257_10275	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KQ257_10290	COG2233	PERMEase
KQ257_10295	COG0583	DNA-binding transcription factor activity
KQ257_10320	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
KQ257_10330	COG0733	neurotransmitter:sodium symporter activity
KQ257_10370	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
KQ257_10375	COG0657	acetylesterase activity
KQ257_10425	COG2951	lytic endotransglycosylase activity
KQ257_10430	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
KQ257_10445	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
KQ257_10455	COG0671	phosphoesterase, PA-phosphatase related
KQ257_10460	COG0861	Integral membrane protein TerC family
KQ257_10470	COG0754	glutathionylspermidine amidase activity
KQ257_10480	COG0402	S-adenosylhomocysteine deaminase activity
KQ257_10495	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
KQ257_10500	COG1230	cation diffusion facilitator family transporter
KQ257_10560	COG0582	viral genome integration into host DNA
KQ257_10570	COG0706	membrane insertase activity
KQ257_10595	COG0592	DNA-directed DNA polymerase activity
KQ257_10605	COG0187	DNA topoisomerase II activity
KQ257_10615	COG0586	Pfam SNARE associated Golgi protein
KQ257_10620	COG0488	(ABC) transporter
KQ257_10645	COG0596	Alpha beta hydrolase
KQ257_10650	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
KQ257_10655	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
KQ257_10695	COG1047	Peptidyl-prolyl cis-trans
KQ257_10705	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
KQ257_10710	COG0196	riboflavin kinase activity
KQ257_10720	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
KQ257_10725	COG1309	transcriptional regulator
KQ257_10730	COG1116	anion transmembrane transporter activity
KQ257_10735	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KQ257_10740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KQ257_10745	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KQ257_10750	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
KQ257_10770	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_10775	COG0546	phosphoglycolate phosphatase activity
KQ257_10830	COG3023	N-Acetylmuramoyl-L-alanine amidase
KQ257_10835	COG0728	peptidoglycan biosynthetic process
KQ257_10865	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
KQ257_10895	COG0438	transferase activity, transferring glycosyl groups
KQ257_10915	COG1216	Glycosyl transferase, family 2
KQ257_10920	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
KQ257_10925	COG1210	Utp--glucose-1-phosphate uridylyltransferase
KQ257_10940	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
KQ257_10950	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
KQ257_10960	COG2186	Transcriptional regulator
KQ257_10970	COG0277	FAD linked oxidase domain protein
KQ257_10975	COG1448	Aminotransferase
KQ257_10985	COG1802	Transcriptional regulator
KQ257_11000	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
KQ257_11020	COG1051	belongs to the nudix hydrolase family
KQ257_11055	COG0564	pseudouridine synthase activity
KQ257_11095	COG0251	oxidation-reduction process
KQ257_11100	COG1113	amino acid transport
KQ257_11105	COG1113	amino acid transport
KQ257_11125	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
KQ257_11130	COG1960	acyl-CoA dehydrogenase activity
KQ257_11135	COG1024	Enoyl-CoA hydratase
KQ257_11140	COG1024	Enoyl-CoA hydratase
KQ257_11145	COG0477	Major facilitator Superfamily
KQ257_11150	COG3916	Acyl-homoserine-lactone synthase
KQ257_11160	COG2197	response regulator
KQ257_11170	COG1960	acyl-CoA dehydrogenase activity
KQ257_11175	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
KQ257_11175	COG3321	synthase
KQ257_11175	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
KQ257_11175	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
KQ257_11215	COG0271	Belongs to the BolA IbaG family
KQ257_11225	COG1192	Involved in chromosome partitioning
KQ257_11240	COG0586	Pfam SNARE associated Golgi protein
KQ257_11245	COG2259	Doxx family
KQ257_11250	COG4399	Belongs to the UPF0754 family
KQ257_11255	COG0519	Catalyzes the synthesis of GMP from XMP
KQ257_11255	COG0518	GMP synthase (glutamine-hydrolyzing) activity
KQ257_11300	COG0281	malic enzyme
KQ257_11310	COG2837	iron assimilation
KQ257_11315	COG1280	lysine exporter protein (LysE YggA)
KQ257_11320	COG1108	ABC-type Mn2 Zn2 transport systems permease components
KQ257_11325	COG1121	(ABC) transporter
KQ257_11395	COG0386	Belongs to the glutathione peroxidase family
KQ257_11410	COG1309	transcriptional regulator
KQ257_11415	COG0697	spore germination
KQ257_11425	COG0758	DNA mediated transformation
KQ257_11460	COG1309	transcriptional regulator
KQ257_11495	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
KQ257_11505	COG0655	NAD(P)H dehydrogenase (quinone) activity
KQ257_11540	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
KQ257_11550	COG2814	Major facilitator Superfamily
KQ257_11560	COG1253	flavin adenine dinucleotide binding
KQ257_11570	COG2860	membrane
KQ257_11575	COG0477	Major facilitator Superfamily
KQ257_11585	COG0318	PFAM AMP-dependent synthetase and ligase
KQ257_11600	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
KQ257_11615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KQ257_11625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KQ257_11630	COG0606	chelatase, subunit chli
KQ257_11660	COG3328	transposase activity
KQ257_11675	COG0589	response to stress
KQ257_11680	COG0659	secondary active sulfate transmembrane transporter activity
KQ257_11690	COG0606	chelatase, subunit chli
KQ257_11700	COG0347	Belongs to the P(II) protein family
KQ257_11705	COG0004	ammonium transporteR
KQ257_11715	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
KQ257_11715	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
KQ257_11755	COG0795	lipopolysaccharide-transporting ATPase activity
KQ257_11760	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
KQ257_11765	COG0793	Belongs to the peptidase S41A family
KQ257_11780	COG2197	response regulator
KQ257_11790	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
KQ257_11800	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
KQ257_11805	COG4974	Belongs to the 'phage' integrase family
KQ257_11830	COG0772	Belongs to the SEDS family
KQ257_11835	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KQ257_11840	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
KQ257_11845	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
KQ257_11870	COG0697	spore germination
KQ257_11875	COG1538	Outer membrane efflux protein
KQ257_11895	COG3275	phosphorelay sensor kinase activity
KQ257_11905	COG0181	hydroxymethylbilane synthase activity
KQ257_11950	COG1716	ATPase activity
KQ257_11955	COG0546	phosphoglycolate phosphatase activity
KQ257_12055	COG2056	Na+-H+ antiporter family
KQ257_12070	COG0326	Molecular chaperone. Has ATPase activity
KQ257_12085	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
KQ257_12130	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_12160	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
KQ257_12165	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
KQ257_12165	COG2169	Transcriptional regulator
KQ257_12195	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
KQ257_12205	COG0497	DNA recombination
KQ257_12220	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KQ257_12230	COG0237	dephospho-CoA kinase activity
KQ257_12280	COG0195	Participates in both transcription termination and antitermination
KQ257_12295	COG1320	monovalent cation:proton antiporter activity
KQ257_12300	COG2212	antiporter activity
KQ257_12305	COG1863	multisubunit Na H antiporter MnhE subunit
KQ257_12310	COG0651	ATP synthesis coupled electron transport
KQ257_12315	COG1006	Multisubunit Na H antiporter MnhC subunit
KQ257_12320	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
KQ257_12320	COG2111	Na H antiporter
KQ257_12335	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
KQ257_12355	COG2226	methyltransferase
KQ257_12375	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
KQ257_12380	COG1074	ATP-dependent DNA helicase activity
KQ257_12385	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
KQ257_12390	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
KQ257_12405	COG0598	Magnesium transport protein CorA
KQ257_12410	COG0789	Transcriptional regulator
KQ257_12415	COG0484	heat shock protein binding
KQ257_12430	COG0475	glutathione-regulated potassium exporter activity
KQ257_12430	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
KQ257_12435	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
KQ257_12455	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KQ257_12465	COG4535	Mg2 and Co2 transporter CorC
KQ257_12470	COG0425	Belongs to the sulfur carrier protein TusA family
KQ257_12480	COG0644	oxidoreductase
KQ257_12480	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
KQ257_12490	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
KQ257_12505	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
KQ257_12510	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
KQ257_12520	COG0493	'glutamate synthase
KQ257_12520	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
KQ257_12550	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
KQ257_12565	COG0534	Mate efflux family protein
KQ257_12575	COG0635	Involved in the biosynthesis of porphyrin-containing compound
KQ257_12580	COG4221	oxidoreductase activity
KQ257_12585	COG0583	DNA-binding transcription factor activity
KQ257_12600	COG0318	PFAM AMP-dependent synthetase and ligase
KQ257_12605	COG1530	ribonuclease E activity
KQ257_12615	COG0546	phosphoglycolate phosphatase activity
KQ257_12620	COG2378	regulation of single-species biofilm formation
KQ257_12625	COG0625	glutathione transferase activity
KQ257_12635	COG0583	DNA-binding transcription factor activity
KQ257_12690	COG0473	3-isopropylmalate dehydrogenase activity
KQ257_12745	COG1301	dicarboxylic acid transport
KQ257_12755	COG1560	Kdo2-lipid A biosynthetic process
KQ257_12760	COG1280	lysine exporter protein (LysE YggA)
KQ257_12765	COG0488	(ABC) transporter
KQ257_12770	COG2900	Belongs to the SlyX family
KQ257_12780	COG1733	regulation of RNA biosynthetic process
KQ257_12805	COG0210	DNA helicase
KQ257_12810	COG0724	RNA recognition motif
KQ257_12830	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
KQ257_12830	COG4651	solute:proton antiporter activity
KQ257_12855	COG0788	formyltetrahydrofolate deformylase activity
KQ257_12955	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
KQ257_12955	COG2813	Specifically methylates the guanine in position
KQ257_12965	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
KQ257_12975	COG4774	siderophore transport
KQ257_12985	COG0740	serine-type endopeptidase activity
KQ257_13005	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
KQ257_13005	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
KQ257_13010	COG0857	belongs to the CobB CobQ family
KQ257_13010	COG0280	phosphate acetyltransferase
KQ257_13015	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
KQ257_13025	COG0800	Aldolase
KQ257_13035	COG3265	gluconokinase activity
KQ257_13040	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_13050	COG2267	carboxylic ester hydrolase activity
KQ257_13065	COG0793	Belongs to the peptidase S41A family
KQ257_13100	COG1426	Protein conserved in bacteria
KQ257_13140	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
KQ257_13150	COG1162	GTPase activity
KQ257_13155	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
KQ257_13170	COG1538	Outer membrane efflux protein
KQ257_13175	COG0577	efflux transmembrane transporter activity
KQ257_13175	COG1136	(ABC) transporter
KQ257_13205	COG0028	Belongs to the TPP enzyme family
KQ257_13210	COG0440	acetolactate synthase activity
KQ257_13240	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
KQ257_13255	COG0084	hydrolase, TatD family'
KQ257_13265	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
KQ257_13275	COG0583	DNA-binding transcription factor activity
KQ257_13285	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
KQ257_13290	COG2814	Major facilitator Superfamily
KQ257_13300	COG0697	spore germination
KQ257_13330	COG3622	Belongs to the hyi family
KQ257_13335	COG2084	Dehydrogenase
KQ257_13340	COG1024	Enoyl-CoA hydratase
KQ257_13345	COG0784	Response regulator, receiver
KQ257_13345	COG2205	protein histidine kinase activity
KQ257_13345	COG5002	protein histidine kinase activity
KQ257_13365	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
KQ257_13370	COG4221	oxidoreductase activity
KQ257_13375	COG3956	TIGRFAM MazG family protein
KQ257_13380	COG1555	photosystem II stabilization
KQ257_13385	COG0617	tRNA 3'-terminal CCA addition
KQ257_13390	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
KQ257_13410	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
KQ257_13415	COG3028	Belongs to the UPF0307 family
KQ257_13425	COG0582	viral genome integration into host DNA
KQ257_13495	COG0625	glutathione transferase activity
KQ257_13500	COG1238	metal cluster binding
KQ257_13535	COG3328	transposase activity
KQ257_13550	COG0072	phenylalanine-tRNA ligase activity
KQ257_13580	COG0248	Ppx GppA phosphatase
KQ257_13590	COG0037	tRNA processing
KQ257_13630	COG1764	response to oxidative stress
KQ257_13635	COG1846	Transcriptional regulator
KQ257_13645	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
KQ257_13705	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
KQ257_13710	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
KQ257_13715	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
KQ257_13725	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
KQ257_13760	COG1214	PFAM Peptidase M22, glycoprotease
KQ257_13785	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
KQ257_13790	COG0561	phosphatase activity
KQ257_13800	COG2132	Multicopper oxidase
KQ257_13820	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
KQ257_13825	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
KQ257_13830	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
KQ257_13860	COG1063	alcohol dehydrogenase
KQ257_13865	COG0583	DNA-binding transcription factor activity
KQ257_13870	COG1960	acyl-CoA dehydrogenase activity
KQ257_13875	COG2814	Major facilitator Superfamily
KQ257_13880	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KQ257_13890	COG1053	succinate dehydrogenase
KQ257_13895	COG0583	DNA-binding transcription factor activity
KQ257_13910	COG0583	DNA-binding transcription factor activity
KQ257_13945	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KQ257_13955	COG0419	ATPase involved in DNA repair
KQ257_13975	COG3328	transposase activity
KQ257_13985	COG0384	phenazine biosynthesis protein PhzF
KQ257_14000	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
KQ257_14020	COG0745	RESPONSE REGULATOR receiver
KQ257_14060	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
KQ257_14090	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
KQ257_14095	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
KQ257_14115	COG0583	DNA-binding transcription factor activity
KQ257_14135	COG0668	transmembrane transport
KQ257_14145	COG2081	HI0933 family
KQ257_14150	COG2515	1-aminocyclopropane-1-carboxylate deaminase
KQ257_14180	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KQ257_14180	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KQ257_14190	COG0489	protein tyrosine kinase activity
KQ257_14240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
KQ257_14250	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
KQ257_14265	COG0730	response to heat
KQ257_14280	COG1196	nuclear chromosome segregation
KQ257_14300	COG2223	nitrite transmembrane transporter activity
KQ257_14305	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
KQ257_14310	COG1877	trehalose-phosphatase activity
KQ257_14315	COG2226	methyltransferase
KQ257_14315	COG0596	Alpha beta hydrolase
KQ257_14315	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
KQ257_14330	COG4106	trans-aconitate 2-methyltransferase activity
KQ257_14345	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
KQ257_14350	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
KQ257_14355	COG0009	L-threonylcarbamoyladenylate synthase
KQ257_14360	COG3101	peptidyl-lysine hydroxylation
KQ257_14365	COG1399	metal-binding, possibly nucleic acid-binding protein
KQ257_14390	COG1652	LysM domain
KQ257_14395	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
KQ257_14395	COG0352	thiamine-phosphate diphosphorylase activity
KQ257_14395	COG0351	phosphomethylpyrimidine kinase
KQ257_14405	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
KQ257_14435	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
KQ257_14465	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
KQ257_14480	COG0358	DNA primase activity
KQ257_14490	COG0564	pseudouridine synthase activity
KQ257_14515	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
KQ257_14535	COG0583	DNA-binding transcription factor activity
KQ257_14540	COG0473	3-isopropylmalate dehydrogenase activity
KQ257_14550	COG0657	acetylesterase activity
KQ257_14560	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_14580	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
KQ257_14580	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
KQ257_14595	COG1981	membrane
KQ257_14640	COG0456	acetyltransferase
KQ257_14650	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
KQ257_14655	COG0492	ferredoxin-NADP+ reductase activity
KQ257_14660	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
KQ257_14660	COG1674	ftsk spoiiie
KQ257_14665	COG1280	lysine exporter protein (LysE YggA)
KQ257_14685	COG2894	cell division
KQ257_14700	COG0204	Acyl-transferase
KQ257_14705	COG2885	chlorophyll binding
KQ257_14710	COG0210	DNA helicase
KQ257_14720	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
KQ257_14735	COG0121	glutamine amidotransferase
KQ257_14755	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
KQ257_14760	COG0735	belongs to the Fur family
KQ257_14785	COG0420	3'-5' exonuclease activity
KQ257_14805	COG1090	epimerase
KQ257_14820	COG2050	protein possibly involved in aromatic compounds catabolism
KQ257_14830	COG2814	Major facilitator Superfamily
KQ257_14835	COG0405	Gamma-glutamyltransferase
KQ257_14845	COG0582	viral genome integration into host DNA
KQ257_14910	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
KQ257_14940	COG0477	Major facilitator Superfamily
KQ257_14945	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KQ257_14955	COG1595	DNA-templated transcription, initiation
KQ257_15010	COG0531	amino acid
KQ257_15015	COG2040	homocysteine
KQ257_15040	COG1309	transcriptional regulator
KQ257_15045	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
KQ257_15050	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
KQ257_15060	COG1607	acyl-coa hydrolase
KQ257_15070	COG0523	cobalamin synthesis protein
KQ257_15080	COG4681	YaeQ
KQ257_15090	COG1649	PFAM Uncharacterised BCR, COG1649
KQ257_15090	COG0726	polysaccharide deacetylase
KQ257_15095	COG1215	transferase activity, transferring glycosyl groups
KQ257_15120	COG1414	Transcriptional regulator
KQ257_15155	COG2271	Major facilitator Superfamily
KQ257_15165	COG2267	carboxylic ester hydrolase activity
KQ257_15170	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_15185	COG0028	Belongs to the TPP enzyme family
KQ257_15195	COG0477	Major facilitator Superfamily
KQ257_15200	COG0242	peptide deformylase activity
KQ257_15205	COG2066	Belongs to the glutaminase family
KQ257_15210	COG2207	Transcriptional regulator
KQ257_15215	COG2223	nitrite transmembrane transporter activity
KQ257_15230	COG0583	DNA-binding transcription factor activity
KQ257_15235	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_15240	COG2271	Major facilitator Superfamily
KQ257_15245	COG3959	Transketolase, thiamine diphosphate binding domain
KQ257_15250	COG3958	Transketolase
KQ257_15260	COG0306	phosphate transporter
KQ257_15280	COG1262	PFAM Formylglycine-generating sulfatase enzyme
KQ257_15325	COG4181	ATPase activity
KQ257_15330	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
KQ257_15355	COG0583	DNA-binding transcription factor activity
KQ257_15365	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
KQ257_15370	COG1773	rubredoxin
KQ257_15425	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_15430	COG1253	flavin adenine dinucleotide binding
KQ257_15470	COG0804	urea catabolic process
KQ257_15480	COG0830	nickel cation binding
KQ257_15495	COG0742	ribosomal rna small subunit methyltransferase
KQ257_15500	COG0768	penicillin binding
KQ257_15525	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
KQ257_15530	COG2878	Part of a membrane complex involved in electron transport
KQ257_15535	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
KQ257_15545	COG3384	dioxygenase
KQ257_15560	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_15570	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_15585	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
KQ257_15625	COG0006	proline dipeptidase activity
KQ257_15630	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KQ257_15635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KQ257_15655	COG1279	arginine transmembrane transporter activity
KQ257_15660	COG0583	DNA-binding transcription factor activity
KQ257_15700	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
KQ257_15705	COG0741	lytic transglycosylase activity
KQ257_15705	COG0741	lytic transglycosylase activity
KQ257_15705	COG1388	LysM domain
KQ257_15705	COG1388	LysM domain
KQ257_15710	COG4166	transmembrane transport
KQ257_15715	COG4174	ABC transporter (Permease)
KQ257_15720	COG4239	(ABC) transporter, permease
KQ257_15725	COG4172	Belongs to the ABC transporter superfamily
KQ257_15745	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
KQ257_15755	COG2203	Gaf domain
KQ257_15755	COG3706	GGDEF domain
KQ257_15755	COG4251	negative regulation of phosphorylation
KQ257_15755	COG5001	Diguanylate cyclase
KQ257_15765	COG0446	pyridine nucleotide-disulphide oxidoreductase
KQ257_15765	COG1902	pentaerythritol trinitrate reductase activity
KQ257_15775	COG0582	viral genome integration into host DNA
KQ257_15790	COG3328	transposase activity
KQ257_15860	COG0789	Transcriptional regulator
KQ257_15920	COG2184	nucleotidyltransferase activity
KQ257_15930	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
KQ257_15955	COG1309	transcriptional regulator
KQ257_15970	COG4269	membrane
KQ257_15995	COG3209	COG3209 Rhs family protein
KQ257_16025	COG1113	amino acid transport
KQ257_16035	COG0531	amino acid
KQ257_16055	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_16075	COG1113	amino acid transport
KQ257_16090	COG0697	spore germination
KQ257_16095	COG2721	sulfolactate sulfo-lyase activity
KQ257_16100	COG2271	Major facilitator Superfamily
KQ257_16105	COG4948	Mandelate Racemase Muconate Lactonizing
KQ257_16115	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_16120	COG2186	Transcriptional regulator
KQ257_16145	COG1960	acyl-CoA dehydrogenase activity
KQ257_16155	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_16160	COG1024	Enoyl-CoA hydratase
KQ257_16165	COG2814	Major facilitator Superfamily
KQ257_16180	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KQ257_16195	COG1262	PFAM Formylglycine-generating sulfatase enzyme
KQ257_16240	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
KQ257_16255	COG0583	DNA-binding transcription factor activity
KQ257_16260	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
KQ257_16265	COG2072	flavoprotein involved in K transport
KQ257_16270	COG0300	oxidoreductase activity
KQ257_16280	COG1309	transcriptional regulator
KQ257_16285	COG1741	Belongs to the pirin family
KQ257_16300	COG2072	flavoprotein involved in K transport
KQ257_16310	COG2252	PERMEase
KQ257_16315	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
KQ257_16320	COG3038	cytochrome b561
KQ257_16330	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
KQ257_16340	COG0527	aspartate kinase activity
KQ257_16395	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
KQ257_16400	COG4197	protein conserved in bacteria, prophage-related
KQ257_16490	COG5410	chromosome segregation
KQ257_16495	COG3567	Phage-associated protein, HI1409 family
KQ257_16510	COG3566	protein conserved in bacteria
KQ257_16630	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
KQ257_16635	COG0582	viral genome integration into host DNA
KQ257_16645	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
KQ257_16655	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
KQ257_16670	COG0667	Aldo Keto reductase
KQ257_16685	COG1765	OsmC-like protein
KQ257_16690	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
KQ257_16700	COG0542	response to heat
KQ257_16735	COG2885	chlorophyll binding
KQ257_16745	COG0625	glutathione transferase activity
KQ257_16750	COG0220	tRNA (guanine-N7-)-methyltransferase activity
KQ257_16770	COG3634	alkyl hydroperoxide reductase activity
KQ257_16780	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
KQ257_16790	COG0450	alkyl hydroperoxide reductase
KQ257_16795	COG1643	Atp-dependent helicase
KQ257_16810	COG2814	Major facilitator Superfamily
KQ257_16815	COG3135	benzoate transporter
KQ257_16820	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_16825	COG0543	2 iron, 2 sulfur cluster binding
KQ257_16825	COG0633	Ferredoxin
KQ257_16830	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
KQ257_16835	COG4638	Rieske (2fe-2S)
KQ257_16840	COG0583	DNA-binding transcription factor activity
KQ257_16890	COG1570	exodeoxyribonuclease VII activity
KQ257_16920	COG1280	lysine exporter protein (LysE YggA)
KQ257_16925	COG1278	Cold shock
KQ257_16950	COG2814	Major facilitator Superfamily
KQ257_17075	COG3728	DNA packaging
KQ257_17075	COG5484	DNA packaging
KQ257_17225	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
KQ257_17225	COG0517	IMP dehydrogenase activity
KQ257_17230	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
KQ257_17240	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
KQ257_17245	COG1137	ATPase activity
KQ257_17250	COG1538	Outer membrane efflux protein
KQ257_17280	COG4122	O-methyltransferase activity
KQ257_17290	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
KQ257_17305	COG1522	sequence-specific DNA binding
KQ257_17310	COG5006	permease, DMT superfamily
KQ257_17320	COG1560	Kdo2-lipid A biosynthetic process
KQ257_17330	COG2814	Major facilitator Superfamily
KQ257_17340	COG2515	1-aminocyclopropane-1-carboxylate deaminase
KQ257_17345	COG1116	anion transmembrane transporter activity
KQ257_17350	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KQ257_17355	COG4521	taurine ABC transporter
KQ257_17375	COG1250	3-hydroxyacyl-CoA dehydrogenase
KQ257_17450	COG0583	DNA-binding transcription factor activity
KQ257_17455	COG1914	H( )-stimulated, divalent metal cation uptake system
KQ257_17475	COG4770	biotin carboxylase activity
KQ257_17480	COG0038	chloride channel
KQ257_17500	COG1063	alcohol dehydrogenase
KQ257_17515	COG0439	Biotin carboxylase
KQ257_17520	COG2249	NAD(P)H dehydrogenase (quinone) activity
KQ257_17525	COG1733	regulation of RNA biosynthetic process
KQ257_17540	COG0864	Transcriptional regulator
KQ257_17550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KQ257_17555	COG1116	anion transmembrane transporter activity
KQ257_17670	COG0590	tRNA wobble adenosine to inosine editing
KQ257_17675	COG2807	transmembrane transport
KQ257_17690	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
KQ257_17700	COG0789	Transcriptional regulator
KQ257_17710	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KQ257_17730	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
KQ257_17755	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_17760	COG0531	amino acid
KQ257_17765	COG1760	l-serine dehydratase
KQ257_17770	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_17770	COG2030	dehydratase
KQ257_17775	COG3396	Phenylacetate-CoA oxygenase
KQ257_17780	COG3460	Phenylacetate-CoA oxygenase
KQ257_17785	COG3396	Phenylacetate-CoA oxygenase
KQ257_17790	COG2151	metal-sulfur cluster biosynthetic enzyme
KQ257_17795	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
KQ257_17800	COG1024	Enoyl-CoA hydratase
KQ257_17805	COG1024	Enoyl-CoA hydratase
KQ257_17810	COG1250	3-hydroxyacyl-CoA dehydrogenase
KQ257_17815	COG0183	Belongs to the thiolase family
KQ257_17820	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
KQ257_17825	COG3327	negative regulation of DNA-templated transcription, initiation
KQ257_17835	COG2050	protein possibly involved in aromatic compounds catabolism
KQ257_17845	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_17880	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_17905	COG1804	L-carnitine dehydratase bile acid-inducible protein F
KQ257_17910	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
KQ257_17915	COG2271	Major facilitator Superfamily
KQ257_17920	COG0753	catalase activity
KQ257_17925	COG3038	cytochrome b561
KQ257_17945	COG2267	carboxylic ester hydrolase activity
KQ257_17950	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KQ257_17955	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KQ257_17960	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_17970	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
KQ257_17980	COG1012	belongs to the aldehyde dehydrogenase family
KQ257_17985	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
KQ257_17990	COG0583	DNA-binding transcription factor activity
KQ257_18000	COG1414	Transcriptional regulator
KQ257_18005	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
KQ257_18020	COG1840	ABC-type Fe3 transport system, periplasmic component
KQ257_18025	COG3842	ATPase activity
KQ257_18040	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
KQ257_18045	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
KQ257_18050	COG2814	Major facilitator Superfamily
KQ257_18055	COG1960	acyl-CoA dehydrogenase activity
KQ257_18070	COG1024	Enoyl-CoA hydratase
KQ257_18080	COG2814	Major facilitator Superfamily
KQ257_18090	COG0183	Belongs to the thiolase family
KQ257_18095	COG1250	3-hydroxyacyl-CoA dehydrogenase
KQ257_18100	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_18105	COG1024	Enoyl-CoA hydratase
KQ257_18110	COG1960	acyl-CoA dehydrogenase activity
KQ257_18115	COG2814	Major facilitator Superfamily
KQ257_18120	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
KQ257_18125	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
KQ257_18135	COG2814	Major facilitator Superfamily
KQ257_18145	COG1960	acyl-CoA dehydrogenase activity
KQ257_18160	COG0583	DNA-binding transcription factor activity
KQ257_18170	COG4770	biotin carboxylase activity
KQ257_18175	COG1024	Enoyl-CoA hydratase
KQ257_18180	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
KQ257_18185	COG1960	acyl-CoA dehydrogenase activity
KQ257_18190	COG1309	transcriptional regulator
KQ257_18195	COG0318	PFAM AMP-dependent synthetase and ligase
KQ257_18215	COG3328	transposase activity
KQ257_18225	COG0583	DNA-binding transcription factor activity
KQ257_18275	COG1028	Short-chain dehydrogenase reductase Sdr
KQ257_18295	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
KQ257_18315	COG0784	Response regulator, receiver
KQ257_18315	COG2205	protein histidine kinase activity
KQ257_18335	COG0765	amino acid transport
KQ257_18340	COG0765	amino acid transport
KQ257_18345	COG1126	abc transporter atp-binding protein
KQ257_18350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KQ257_18355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
KQ257_18370	COG1280	lysine exporter protein (LysE YggA)
KQ257_18375	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
KQ257_18380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
KQ257_18385	COG1045	serine acetyltransferase
KQ257_18400	COG0583	DNA-binding transcription factor activity
KQ257_18405	COG0625	glutathione transferase activity
KQ257_18410	COG0625	glutathione transferase activity
KQ257_18415	COG0583	DNA-binding transcription factor activity
KQ257_18425	COG1346	cytolysis
KQ257_18445	COG2814	Major facilitator Superfamily
KQ257_18455	COG0583	DNA-binding transcription factor activity
KQ257_18465	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
KQ257_18470	COG3052	prosthetic group binding
KQ257_18490	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
KQ257_18510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
KQ257_18520	COG1294	oxidase, subunit
KQ257_18525	COG1271	oxidase subunit
KQ257_18545	COG0477	Major facilitator Superfamily
KQ257_18555	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_18560	COG4521	taurine ABC transporter
KQ257_18565	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
KQ257_18570	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
KQ257_18575	COG2175	clavaminate synthase activity
KQ257_18585	COG1953	Uracil, thiamine, allantoin
KQ257_18595	COG0583	DNA-binding transcription factor activity
KQ257_18605	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
KQ257_18620	COG0640	Transcriptional regulator
KQ257_18625	COG0798	PFAM Bile acid sodium symporter
KQ257_18630	COG0583	DNA-binding transcription factor activity
KQ257_18645	COG3634	alkyl hydroperoxide reductase activity
KQ257_18685	COG0436	Aminotransferase
KQ257_18695	COG0386	Belongs to the glutathione peroxidase family
KQ257_18705	COG3328	transposase activity
KQ257_18745	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
KQ257_18770	COG0012	GTP binding
KQ257_18775	COG2011	ABC-type metal ion transport system permease component
KQ257_18780	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
KQ257_18790	COG1464	Belongs to the NlpA lipoprotein family
KQ257_18820	COG0765	amino acid transport
KQ257_18825	COG0765	amino acid transport
KQ257_18830	COG1126	abc transporter atp-binding protein
KQ257_18840	COG1522	sequence-specific DNA binding
KQ257_18855	COG1309	transcriptional regulator
KQ257_18875	COG0583	DNA-binding transcription factor activity
KQ257_18885	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
KQ257_18895	COG0697	spore germination
KQ257_18920	COG3121	Chaperone
KQ257_18925	COG3539	Fimbrial protein
KQ257_18950	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
KQ257_18950	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
KQ257_19030	COG1525	nuclease
KQ257_19080	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
KQ257_19105	COG0583	DNA-binding transcription factor activity
KQ257_19170	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
KQ257_19180	COG4372	Transposase
KQ257_19230	COG1475	DNA binding
KQ257_19245	COG3853	Toxic anion resistance protein (TelA)
KQ257_19335	COG0484	heat shock protein binding
KQ257_19420	COG0741	lytic transglycosylase activity
KQ257_19455	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
KQ257_19535	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
KQ257_19545	COG2826	transposase and inactivated derivatives, IS30 family
KQ257_19700	COG2826	transposase and inactivated derivatives, IS30 family