locus-tag class description KQ251_00010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KQ251_00015 PF00467 KOW motif KQ251_00015 PF02357 Transcription termination factor nusG KQ251_00020 PF00298 Ribosomal protein L11, RNA binding domain KQ251_00020 PF03946 Ribosomal protein L11, N-terminal domain KQ251_00025 PF00687 Ribosomal protein L1p/L10e family KQ251_00030 PF00466 Ribosomal protein L10 KQ251_00035 PF16320 Ribosomal protein L7/L12 dimerisation domain KQ251_00035 PF00542 Ribosomal protein L7/L12 C-terminal domain KQ251_00040 PF04563 RNA polymerase beta subunit KQ251_00040 PF04561 RNA polymerase Rpb2, domain 2 KQ251_00040 PF04565 RNA polymerase Rpb2, domain 3 KQ251_00040 PF10385 RNA polymerase beta subunit external 1 domain KQ251_00040 PF00562 RNA polymerase Rpb2, domain 6 KQ251_00040 PF04560 RNA polymerase Rpb2, domain 7 KQ251_00045 PF04998 RNA polymerase Rpb1, domain 5 KQ251_00045 PF05000 RNA polymerase Rpb1, domain 4 KQ251_00045 PF04997 RNA polymerase Rpb1, domain 1 KQ251_00045 PF00623 RNA polymerase Rpb1, domain 2 KQ251_00045 PF04983 RNA polymerase Rpb1, domain 3 KQ251_00070 PF13726 Na+-H+ antiporter family KQ251_00070 PF03553 Na+/H+ antiporter family KQ251_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_00085 PF00183 Hsp90 protein KQ251_00100 PF01323 DSBA-like thioredoxin domain KQ251_00110 PF00376 MerR family regulatory protein KQ251_00110 PF09278 MerR, DNA binding KQ251_00125 PF02803 Thiolase, C-terminal domain KQ251_00125 PF00108 Thiolase, N-terminal domain KQ251_00130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_00130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_00130 PF00378 Enoyl-CoA hydratase/isomerase KQ251_00155 PF01541 GIY-YIG catalytic domain KQ251_00155 PF02151 UvrB/uvrC motif KQ251_00155 PF08459 UvrC Helix-hairpin-helix N-terminal KQ251_00165 PF01066 CDP-alcohol phosphatidyltransferase KQ251_00170 PF02805 Metal binding domain of Ada KQ251_00170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ251_00170 PF12833 Helix-turn-helix domain KQ251_00170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ251_00195 PF13533 Biotin-lipoyl like KQ251_00200 PF03652 Holliday junction resolvase KQ251_00205 PF02622 Uncharacterized ACR, COG1678 KQ251_00210 PF02463 RecF/RecN/SMC N terminal domain KQ251_00220 PF06865 Pyrimidine/purine nucleoside phosphorylase KQ251_00225 PF00588 SpoU rRNA Methylase family KQ251_00225 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ251_00235 PF01121 Dephospho-CoA kinase KQ251_00240 PF06750 Bacterial Peptidase A24 N-terminal domain KQ251_00240 PF01478 Type IV leader peptidase family KQ251_00245 PF00482 Type II secretion system (T2SS), protein F KQ251_00250 PF00437 Type II/IV secretion system protein KQ251_00250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ251_00255 PF00121 Triosephosphate isomerase KQ251_00260 PF03840 Preprotein translocase SecG subunit KQ251_00280 PF02576 RimP N-terminal domain KQ251_00280 PF17384 RimP C-terminal SH3 domain KQ251_00285 PF13184 NusA-like KH domain KQ251_00285 PF08529 NusA N-terminal domain KQ251_00285 PF00575 S1 RNA binding domain KQ251_00290 PF04760 Translation initiation factor IF-2, N-terminal region KQ251_00290 PF08364 Bacterial translation initiation factor IF-2 associated region KQ251_00290 PF00009 Elongation factor Tu GTP binding domain KQ251_00290 PF11987 Translation-initiation factor 2 KQ251_00295 PF02033 Ribosome-binding factor A KQ251_00300 PF03334 Na+/H+ antiporter subunit KQ251_00305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KQ251_00310 PF01899 Na+/H+ ion antiporter subunit KQ251_00315 PF00361 Proton-conducting membrane transporter KQ251_00320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ251_00325 PF13244 Domain of unknown function (DUF4040) KQ251_00325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KQ251_00325 PF00361 Proton-conducting membrane transporter KQ251_00325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ251_00340 PF01502 Phosphoribosyl-AMP cyclohydrolase KQ251_00345 PF01494 FAD binding domain KQ251_00350 PF03109 ABC1 family KQ251_00360 PF01209 ubiE/COQ5 methyltransferase family KQ251_00370 PF03976 Polyphosphate kinase 2 (PPK2) KQ251_00380 PF17946 RecC C-terminal domain KQ251_00385 PF13361 UvrD-like helicase C-terminal domain KQ251_00385 PF12705 PD-(D/E)XK nuclease superfamily KQ251_00385 PF00580 UvrD/REP helicase N-terminal domain KQ251_00390 PF13538 UvrD-like helicase C-terminal domain KQ251_00395 PF00144 Beta-lactamase KQ251_00400 PF00312 Ribosomal protein S15 KQ251_00405 PF00013 KH domain KQ251_00405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KQ251_00405 PF01138 3' exoribonuclease family, domain 1 KQ251_00405 PF03725 3' exoribonuclease family, domain 2 KQ251_00405 PF00575 S1 RNA binding domain KQ251_00410 PF01544 CorA-like Mg2+ transporter protein KQ251_00420 PF01556 DnaJ C terminal domain KQ251_00420 PF00226 DnaJ domain KQ251_00430 PF01430 Hsp33 protein KQ251_00435 PF02254 TrkA-N domain KQ251_00435 PF00999 Sodium/hydrogen exchanger family KQ251_00440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KQ251_00440 PF17764 3′ DNA-binding domain (3′BD) KQ251_00440 PF00271 Helicase conserved C-terminal domain KQ251_00440 PF18074 Primosomal protein N C-terminal domain KQ251_00440 PF00270 DEAD/DEAH box helicase KQ251_00445 PF00482 Type II secretion system (T2SS), protein F KQ251_00450 PF07963 Prokaryotic N-terminal methylation motif KQ251_00450 PF08334 Type II secretion system (T2SS), protein G KQ251_00460 PF01588 Putative tRNA binding domain KQ251_00465 PF00795 Carbon-nitrogen hydrolase KQ251_00470 PF00571 CBS domain KQ251_00470 PF03471 Transporter associated domain KQ251_00475 PF01206 Sulfurtransferase TusA KQ251_00495 PF01177 Asp/Glu/Hydantoin racemase KQ251_00505 PF00762 Ferrochelatase KQ251_00510 PF00753 Metallo-beta-lactamase superfamily KQ251_00515 PF03884 DNA gyrase inhibitor YacG KQ251_00525 PF13247 4Fe-4S dicluster domain KQ251_00525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ251_00525 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_00535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KQ251_00545 PF01197 Ribosomal protein L31 KQ251_00550 PF03109 ABC1 family KQ251_00555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_00555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_00560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_00560 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_00560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_00565 PF01554 MatE KQ251_00575 PF04055 Radical SAM superfamily KQ251_00575 PF06969 HemN C-terminal domain KQ251_00580 PF00106 short chain dehydrogenase KQ251_00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_00585 PF03466 LysR substrate binding domain KQ251_00600 PF00501 AMP-binding enzyme KQ251_00600 PF13193 AMP-binding enzyme C-terminal domain KQ251_00605 PF10150 Ribonuclease E/G family KQ251_00605 PF12111 Polyribonucleotide phosphorylase C terminal KQ251_00605 PF00575 S1 RNA binding domain KQ251_00610 PF00849 RNA pseudouridylate synthase KQ251_00610 PF01479 S4 domain KQ251_00615 PF13419 Haloacid dehalogenase-like hydrolase KQ251_00620 PF13280 WYL domain KQ251_00620 PF08279 HTH domain KQ251_00625 PF02798 Glutathione S-transferase, N-terminal domain KQ251_00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_00635 PF03466 LysR substrate binding domain KQ251_00640 PF12706 Beta-lactamase superfamily domain KQ251_00645 PF00141 Peroxidase KQ251_00650 PF00391 PEP-utilising enzyme, mobile domain KQ251_00650 PF02896 PEP-utilising enzyme, TIM barrel domain KQ251_00650 PF05524 PEP-utilising enzyme, N-terminal KQ251_00650 PF01590 GAF domain KQ251_00655 PF00293 NUDIX domain KQ251_00675 PF03466 LysR substrate binding domain KQ251_00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_00685 PF00330 Aconitase family (aconitate hydratase) KQ251_00690 PF00694 Aconitase C-terminal domain KQ251_00700 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ251_00715 PF01176 Translation initiation factor 1A / IF-1 KQ251_00725 PF01416 tRNA pseudouridine synthase KQ251_00745 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ251_00745 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ251_00755 PF00375 Sodium:dicarboxylate symporter family KQ251_00765 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ251_00770 PF01810 LysE type translocator KQ251_00775 PF00005 ABC transporter KQ251_00775 PF16326 ABC transporter C-terminal domain KQ251_00775 PF12848 ABC transporter KQ251_00780 PF04102 SlyX KQ251_00785 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_00785 PF00107 Zinc-binding dehydrogenase KQ251_00790 PF01638 HxlR-like helix-turn-helix KQ251_00800 PF01396 Topoisomerase DNA binding C4 zinc finger KQ251_00800 PF01751 Toprim domain KQ251_00800 PF01131 DNA topoisomerase KQ251_00800 PF08272 Topoisomerase I zinc-ribbon-like KQ251_00815 PF00580 UvrD/REP helicase N-terminal domain KQ251_00815 PF13361 UvrD-like helicase C-terminal domain KQ251_00820 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KQ251_00840 PF00999 Sodium/hydrogen exchanger family KQ251_00840 PF02254 TrkA-N domain KQ251_00845 PF00471 Ribosomal protein L33 KQ251_00850 PF00830 Ribosomal L28 family KQ251_00855 PF00171 Aldehyde dehydrogenase family KQ251_00865 PF01842 ACT domain KQ251_00865 PF00551 Formyl transferase KQ251_00875 PF01618 MotA/TolQ/ExbB proton channel family KQ251_00885 PF01625 Peptide methionine sulfoxide reductase KQ251_00895 PF00186 Dihydrofolate reductase KQ251_00900 PF00303 Thymidylate synthase KQ251_00915 PF01790 Prolipoprotein diacylglyceryl transferase KQ251_00935 PF00902 Sec-independent protein translocase protein (TatC) KQ251_00940 PF02416 mttA/Hcf106 family KQ251_00945 PF02416 mttA/Hcf106 family KQ251_00955 PF01725 Ham1 family KQ251_00965 PF07021 Methionine biosynthesis protein MetW KQ251_00965 PF00561 alpha/beta hydrolase fold KQ251_00970 PF00561 alpha/beta hydrolase fold KQ251_00975 PF00682 HMGL-like KQ251_00975 PF08502 LeuA allosteric (dimerisation) domain KQ251_00980 PF13640 2OG-Fe(II) oxygenase superfamily KQ251_00980 PF18331 PKHD-type hydroxylase C-terminal domain KQ251_00985 PF07715 TonB-dependent Receptor Plug Domain KQ251_00985 PF00593 TonB dependent receptor KQ251_00990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_00990 PF05697 Bacterial trigger factor protein (TF) KQ251_00990 PF05698 Bacterial trigger factor protein (TF) C-terminus KQ251_00995 PF00574 Clp protease KQ251_01000 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_01000 PF07724 AAA domain (Cdc48 subfamily) KQ251_01000 PF06689 ClpX C4-type zinc finger KQ251_01015 PF05681 Fumarate hydratase (Fumerase) KQ251_01015 PF05683 Fumarase C-terminus KQ251_01020 PF07085 DRTGG domain KQ251_01020 PF01515 Phosphate acetyl/butaryl transferase KQ251_01025 PF00871 Acetokinase family KQ251_01030 PF00920 Dehydratase family KQ251_01035 PF01081 KDPG and KHG aldolase KQ251_01040 PF02447 GntP family permease KQ251_01045 PF01202 Shikimate kinase KQ251_01050 PF00171 Aldehyde dehydrogenase family KQ251_01055 PF00171 Aldehyde dehydrogenase family KQ251_01060 PF00561 alpha/beta hydrolase fold KQ251_01070 PF00933 Glycosyl hydrolase family 3 N terminal domain KQ251_01075 PF11818 C-terminal domain of tail specific protease (DUF3340) KQ251_01075 PF03572 Peptidase family S41 KQ251_01075 PF17804 Tail specific protease N-terminal domain KQ251_01075 PF00595 PDZ domain KQ251_01080 PF00534 Glycosyl transferases group 1 KQ251_01080 PF13439 Glycosyltransferase Family 4 KQ251_01085 PF01569 PAP2 superfamily KQ251_01090 PF04384 Iron-sulphur cluster assembly KQ251_01095 PF00334 Nucleoside diphosphate kinase KQ251_01100 PF04055 Radical SAM superfamily KQ251_01110 PF13464 Domain of unknown function (DUF4115) KQ251_01115 PF04551 GcpE protein KQ251_01120 PF13393 Histidyl-tRNA synthetase KQ251_01120 PF03129 Anticodon binding domain KQ251_01130 PF13360 PQQ-like domain KQ251_01135 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KQ251_01135 PF01926 50S ribosome-binding GTPase KQ251_01145 PF02556 Preprotein translocase subunit SecB KQ251_01150 PF00462 Glutaredoxin KQ251_01160 PF03193 RsgA GTPase KQ251_01165 PF00929 Exonuclease KQ251_01180 PF02321 Outer membrane efflux protein KQ251_01185 PF12704 MacB-like periplasmic core domain KQ251_01185 PF02687 FtsX-like permease family KQ251_01185 PF00005 ABC transporter KQ251_01190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_01205 PF09334 tRNA synthetases class I (M) KQ251_01205 PF13603 Leucyl-tRNA synthetase, Domain 2 KQ251_01205 PF00133 tRNA synthetases class I (I, L, M and V) KQ251_01205 PF08264 Anticodon-binding domain of tRNA KQ251_01215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ251_01215 PF00205 Thiamine pyrophosphate enzyme, central domain KQ251_01215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ251_01220 PF10369 Small subunit of acetolactate synthase KQ251_01225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KQ251_01225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KQ251_01230 PF00990 Diguanylate cyclase, GGDEF domain KQ251_01230 PF03707 Bacterial signalling protein N terminal repeat KQ251_01230 PF00563 EAL domain KQ251_01250 PF16658 Class II release factor RF3, C-terminal domain KQ251_01250 PF03144 Elongation factor Tu domain 2 KQ251_01250 PF00009 Elongation factor Tu GTP binding domain KQ251_01265 PF01026 TatD related DNase KQ251_01270 PF00694 Aconitase C-terminal domain KQ251_01270 PF00330 Aconitase family (aconitate hydratase) KQ251_01280 PF00899 ThiF family KQ251_01290 PF03466 LysR substrate binding domain KQ251_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_01300 PF01207 Dihydrouridine synthase (Dus) KQ251_01305 PF07690 Major Facilitator Superfamily KQ251_01315 PF00892 EamA-like transporter family KQ251_01320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KQ251_01320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KQ251_01325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KQ251_01330 PF02233 NAD(P) transhydrogenase beta subunit KQ251_01335 PF00106 short chain dehydrogenase KQ251_01345 PF01261 Xylose isomerase-like TIM barrel KQ251_01350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ251_01350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ251_01355 PF00378 Enoyl-CoA hydratase/isomerase KQ251_01360 PF00672 HAMP domain KQ251_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_01360 PF00512 His Kinase A (phospho-acceptor) domain KQ251_01360 PF01627 Hpt domain KQ251_01360 PF00072 Response regulator receiver domain KQ251_01360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KQ251_01365 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_01375 PF05958 tRNA (Uracil-5-)-methyltransferase KQ251_01380 PF02824 TGS domain KQ251_01380 PF04607 Region found in RelA / SpoT proteins KQ251_01380 PF13291 ACT domain KQ251_01385 PF00106 short chain dehydrogenase KQ251_01390 PF03819 MazG nucleotide pyrophosphohydrolase domain KQ251_01400 PF12626 Polymerase A arginine-rich C-terminus KQ251_01400 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ251_01400 PF01743 Poly A polymerase head domain KQ251_01405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KQ251_01410 PF02548 Ketopantoate hydroxymethyltransferase KQ251_01415 PF02569 Pantoate-beta-alanine ligase KQ251_01420 PF03668 P-loop ATPase protein family KQ251_01425 PF00381 PTS HPr component phosphorylation site KQ251_01430 PF04751 Protein of unknown function (DUF615) KQ251_01435 PF00501 AMP-binding enzyme KQ251_01435 PF13193 AMP-binding enzyme C-terminal domain KQ251_01440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ251_01440 PF02824 TGS domain KQ251_01440 PF03129 Anticodon binding domain KQ251_01440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ251_01445 PF05198 Translation initiation factor IF-3, N-terminal domain KQ251_01445 PF00707 Translation initiation factor IF-3, C-terminal domain KQ251_01450 PF02798 Glutathione S-transferase, N-terminal domain KQ251_01450 PF00043 Glutathione S-transferase, C-terminal domain KQ251_01455 PF09335 SNARE associated Golgi protein KQ251_01460 PF07690 Major Facilitator Superfamily KQ251_01465 PF01632 Ribosomal protein L35 KQ251_01470 PF00453 Ribosomal protein L20 KQ251_01490 PF01409 tRNA synthetases class II core domain (F) KQ251_01490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KQ251_01495 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KQ251_01495 PF01588 Putative tRNA binding domain KQ251_01495 PF03147 Ferredoxin-fold anticodon binding domain KQ251_01495 PF03484 tRNA synthetase B5 domain KQ251_01495 PF03483 B3/4 domain KQ251_01500 PF00216 Bacterial DNA-binding protein KQ251_01515 PF07497 Rho termination factor, RNA-binding domain KQ251_01515 PF07498 Rho termination factor, N-terminal domain KQ251_01515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ251_01520 PF00085 Thioredoxin KQ251_01525 PF02541 Ppx/GppA phosphatase family KQ251_01530 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KQ251_01535 PF09179 TilS substrate binding domain KQ251_01535 PF01171 PP-loop family KQ251_01535 PF11734 TilS substrate C-terminal domain KQ251_01540 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ251_01540 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ251_01545 PF02325 YGGT family KQ251_01550 PF01367 5'-3' exonuclease, C-terminal SAM fold KQ251_01550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KQ251_01550 PF00476 DNA polymerase family A KQ251_01550 PF01612 3'-5' exonuclease KQ251_01570 PF00437 Type II/IV secretion system protein KQ251_01575 PF02566 OsmC-like protein KQ251_01580 PF01047 MarR family KQ251_01590 PF00795 Carbon-nitrogen hydrolase KQ251_01635 PF04963 Sigma-54 factor, core binding domain KQ251_01635 PF04552 Sigma-54, DNA binding domain KQ251_01635 PF00309 Sigma-54 factor, Activator interacting domain (AID) KQ251_01640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KQ251_01645 PF01722 BolA-like protein KQ251_01650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ251_01655 PF01634 ATP phosphoribosyltransferase KQ251_01660 PF00815 Histidinol dehydrogenase KQ251_01665 PF00155 Aminotransferase class I and II KQ251_01670 PF00425 chorismate binding enzyme KQ251_01670 PF04715 Anthranilate synthase component I, N terminal region KQ251_01710 PF00293 NUDIX domain KQ251_01715 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_01720 PF00814 Glycoprotease family KQ251_01725 PF04445 Putative SAM-dependent methyltransferase KQ251_01735 PF00756 Putative esterase KQ251_01745 PF00834 Ribulose-phosphate 3 epimerase family KQ251_01760 PF07732 Multicopper oxidase KQ251_01760 PF07731 Multicopper oxidase KQ251_01760 PF00394 Multicopper oxidase KQ251_01765 PF05275 Copper resistance protein B precursor (CopB) KQ251_01775 PF00893 Small Multidrug Resistance protein KQ251_01780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ251_01780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ251_01785 PF01960 ArgJ family KQ251_01790 PF02445 Quinolinate synthetase A protein KQ251_01815 PF00962 Adenosine/AMP deaminase KQ251_01820 PF00107 Zinc-binding dehydrogenase KQ251_01820 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_01825 PF03466 LysR substrate binding domain KQ251_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_01830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_01830 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_01830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_01835 PF07690 Major Facilitator Superfamily KQ251_01840 PF02515 CoA-transferase family III KQ251_01850 PF14537 Cytochrome c3 KQ251_01850 PF00890 FAD binding domain KQ251_01855 PF03466 LysR substrate binding domain KQ251_01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_01870 PF03466 LysR substrate binding domain KQ251_01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_01905 PF01717 Cobalamin-independent synthase, Catalytic domain KQ251_01905 PF08267 Cobalamin-independent synthase, N-terminal domain KQ251_01910 PF01613 Flavin reductase like domain KQ251_01950 PF17074 Darcynin, domain of unknown function KQ251_01975 PF13936 Helix-turn-helix domain KQ251_01975 PF00665 Integrase core domain KQ251_01980 PF01011 PQQ enzyme repeat KQ251_01985 PF13737 Transposase DDE domain KQ251_02025 PF00145 C-5 cytosine-specific DNA methylase KQ251_02030 PF13426 PAS domain KQ251_02030 PF13188 PAS domain KQ251_02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_02040 PF00268 Ribonucleotide reductase, small chain KQ251_02050 PF00317 Ribonucleotide reductase, all-alpha domain KQ251_02050 PF02867 Ribonucleotide reductase, barrel domain KQ251_02050 PF03477 ATP cone domain KQ251_02060 PF00486 Transcriptional regulatory protein, C terminal KQ251_02060 PF00072 Response regulator receiver domain KQ251_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_02065 PF00512 His Kinase A (phospho-acceptor) domain KQ251_02065 PF00672 HAMP domain KQ251_02075 PF17151 Periplasmic sensor domain KQ251_02075 PF00990 Diguanylate cyclase, GGDEF domain KQ251_02080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KQ251_02085 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KQ251_02090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KQ251_02090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KQ251_02100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KQ251_02100 PF10531 SLBB domain KQ251_02100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KQ251_02105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KQ251_02105 PF00384 Molybdopterin oxidoreductase KQ251_02105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ251_02110 PF00146 NADH dehydrogenase KQ251_02115 PF12838 4Fe-4S dicluster domain KQ251_02120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KQ251_02125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ251_02130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ251_02130 PF00361 Proton-conducting membrane transporter KQ251_02135 PF00361 Proton-conducting membrane transporter KQ251_02140 PF00361 Proton-conducting membrane transporter KQ251_02150 PF00313 'Cold-shock' DNA-binding domain KQ251_02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_02160 PF03466 LysR substrate binding domain KQ251_02165 PF00970 Oxidoreductase FAD-binding domain KQ251_02165 PF00175 Oxidoreductase NAD-binding domain KQ251_02180 PF05552 Conserved TM helix KQ251_02195 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_02200 PF13533 Biotin-lipoyl like KQ251_02225 PF09334 tRNA synthetases class I (M) KQ251_02225 PF01588 Putative tRNA binding domain KQ251_02235 PF10609 NUBPL iron-transfer P-loop NTPase KQ251_02245 PF01048 Phosphorylase superfamily KQ251_02260 PF00692 dUTPase KQ251_02290 PF01207 Dihydrouridine synthase (Dus) KQ251_02300 PF02881 SRP54-type protein, helical bundle domain KQ251_02300 PF00448 SRP54-type protein, GTPase domain KQ251_02300 PF02978 Signal peptide binding domain KQ251_02305 PF03309 Type III pantothenate kinase KQ251_02315 PF01925 Sulfite exporter TauE/SafE KQ251_02325 PF06470 SMC proteins Flexible Hinge Domain KQ251_02325 PF02463 RecF/RecN/SMC N terminal domain KQ251_02335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KQ251_02335 PF01653 NAD-dependent DNA ligase adenylation domain KQ251_02335 PF03120 NAD-dependent DNA ligase OB-fold domain KQ251_02335 PF00533 BRCA1 C Terminus (BRCT) domain KQ251_02335 PF12826 Helix-hairpin-helix motif KQ251_02340 PF00210 Ferritin-like domain KQ251_02345 PF07690 Major Facilitator Superfamily KQ251_02350 PF00982 Glycosyltransferase family 20 KQ251_02355 PF02358 Trehalose-phosphatase KQ251_02360 PF12697 Alpha/beta hydrolase family KQ251_02360 PF08241 Methyltransferase domain KQ251_02365 PF00202 Aminotransferase class-III KQ251_02365 PF06968 Biotin and Thiamin Synthesis associated domain KQ251_02365 PF04055 Radical SAM superfamily KQ251_02370 PF00155 Aminotransferase class I and II KQ251_02385 PF00849 RNA pseudouridylate synthase KQ251_02385 PF01479 S4 domain KQ251_02390 PF04079 Segregation and condensation complex subunit ScpB KQ251_02395 PF02616 Segregation and condensation protein ScpA KQ251_02400 PF01300 Telomere recombination KQ251_02405 PF04315 Elongation factor P hydroxylase KQ251_02410 PF02620 Large ribosomal RNA subunit accumulation protein YceD KQ251_02415 PF01783 Ribosomal L32p protein family KQ251_02420 PF00698 Acyl transferase domain KQ251_02430 PF00550 Phosphopantetheine attachment site KQ251_02435 PF01476 LysM domain KQ251_02435 PF04972 BON domain KQ251_02440 PF08543 Phosphomethylpyrimidine kinase KQ251_02440 PF03070 TENA/THI-4/PQQC family KQ251_02440 PF02581 Thiamine monophosphate synthase KQ251_02450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ251_02465 PF02261 Aspartate decarboxylase KQ251_02470 PF01195 Peptidyl-tRNA hydrolase KQ251_02475 PF01386 Ribosomal L25p family KQ251_02480 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ251_02480 PF14572 Phosphoribosyl synthetase-associated domain KQ251_02505 PF00288 GHMP kinases N terminal domain KQ251_02505 PF08544 GHMP kinases C terminal KQ251_02510 PF03550 Outer membrane lipoprotein LolB KQ251_02520 PF01488 Shikimate / quinate 5-dehydrogenase KQ251_02520 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KQ251_02520 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KQ251_02525 PF10410 DnaB-helicase binding domain of primase KQ251_02525 PF08278 DNA primase DnaG DnaB-binding KQ251_02525 PF08275 DNA primase catalytic core, N-terminal domain KQ251_02525 PF01807 CHC2 zinc finger KQ251_02530 PF13525 Outer membrane lipoprotein KQ251_02535 PF00849 RNA pseudouridylate synthase KQ251_02535 PF01479 S4 domain KQ251_02540 PF02578 Multi-copper polyphenol oxidoreductase laccase KQ251_02545 PF03358 NADPH-dependent FMN reductase KQ251_02550 PF01668 SmpB protein KQ251_02555 PF01467 Cytidylyltransferase-like KQ251_02560 PF00037 4Fe-4S binding domain KQ251_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_02580 PF03466 LysR substrate binding domain KQ251_02585 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ251_02590 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_02595 PF07859 alpha/beta hydrolase fold KQ251_02600 PF00355 Rieske [2Fe-2S] domain KQ251_02600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_02605 PF00171 Aldehyde dehydrogenase family KQ251_02610 PF00970 Oxidoreductase FAD-binding domain KQ251_02610 PF00175 Oxidoreductase NAD-binding domain KQ251_02610 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_02625 PF00795 Carbon-nitrogen hydrolase KQ251_02625 PF02540 NAD synthase KQ251_02635 PF05726 Pirin C-terminal cupin domain KQ251_02635 PF02678 Pirin KQ251_02640 PF03653 Uncharacterised protein family (UPF0093) KQ251_02645 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_02645 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_02655 PF00164 Ribosomal protein S12/S23 KQ251_02660 PF00177 Ribosomal protein S7p/S5e KQ251_02665 PF14492 Elongation Factor G, domain II KQ251_02665 PF03144 Elongation factor Tu domain 2 KQ251_02665 PF00009 Elongation factor Tu GTP binding domain KQ251_02665 PF03764 Elongation factor G, domain IV KQ251_02665 PF00679 Elongation factor G C-terminus KQ251_02670 PF00009 Elongation factor Tu GTP binding domain KQ251_02670 PF03143 Elongation factor Tu C-terminal domain KQ251_02670 PF03144 Elongation factor Tu domain 2 KQ251_02685 PF00583 Acetyltransferase (GNAT) family KQ251_02690 PF04376 Arginine-tRNA-protein transferase, N terminus KQ251_02690 PF04377 Arginine-tRNA-protein transferase, C terminus KQ251_02695 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KQ251_02700 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_02705 PF09397 Ftsk gamma domain KQ251_02705 PF17854 FtsK alpha domain KQ251_02705 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KQ251_02705 PF01580 FtsK/SpoIIIE family KQ251_02710 PF01810 LysE type translocator KQ251_02720 PF03776 Septum formation topological specificity factor MinE KQ251_02725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KQ251_02730 PF03775 Septum formation inhibitor MinC, C-terminal domain KQ251_02740 PF01553 Acyltransferase KQ251_02745 PF13488 Glycine zipper KQ251_02745 PF00691 OmpA family KQ251_02750 PF13361 UvrD-like helicase C-terminal domain KQ251_02750 PF00580 UvrD/REP helicase N-terminal domain KQ251_02755 PF00692 dUTPase KQ251_02760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ251_02760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ251_02760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ251_02760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ251_02765 PF00696 Amino acid kinase family KQ251_02775 PF13230 Glutamine amidotransferases class-II KQ251_02780 PF01814 Hemerythrin HHE cation binding domain KQ251_02790 PF03658 RnfH family Ubiquitin KQ251_02795 PF04355 SmpA / OmlA family KQ251_02800 PF01475 Ferric uptake regulator family KQ251_02805 PF00437 Type II/IV secretion system protein KQ251_02810 PF00437 Type II/IV secretion system protein KQ251_02815 PF01168 Alanine racemase, N-terminal domain KQ251_02825 PF12320 Type 5 capsule protein repressor C-terminal domain KQ251_02825 PF00149 Calcineurin-like phosphoesterase KQ251_02845 PF08338 Domain of unknown function (DUF1731) KQ251_02845 PF01370 NAD dependent epimerase/dehydratase family KQ251_02850 PF01266 FAD dependent oxidoreductase KQ251_02855 PF00490 Delta-aminolevulinic acid dehydratase KQ251_02860 PF03061 Thioesterase superfamily KQ251_02865 PF13533 Biotin-lipoyl like KQ251_02870 PF07690 Major Facilitator Superfamily KQ251_02920 PF00929 Exonuclease KQ251_02995 PF00145 C-5 cytosine-specific DNA methylase KQ251_03005 PF01695 IstB-like ATP binding protein KQ251_03200 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KQ251_03240 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ251_03240 PF02767 DNA polymerase III beta subunit, central domain KQ251_03240 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ251_03325 PF11799 impB/mucB/samB family C-terminal domain KQ251_03325 PF11798 IMS family HHH motif KQ251_03325 PF13438 Domain of unknown function (DUF4113) KQ251_03325 PF00817 impB/mucB/samB family KQ251_03330 PF00717 Peptidase S24-like KQ251_03345 PF13356 Arm DNA-binding domain KQ251_03345 PF00589 Phage integrase family KQ251_03455 PF00083 Sugar (and other) transporter KQ251_03460 PF00701 Dihydrodipicolinate synthetase family KQ251_03470 PF08281 Sigma-70, region 4 KQ251_03470 PF04542 Sigma-70 region 2 KQ251_03480 PF00593 TonB dependent receptor KQ251_03480 PF07715 TonB-dependent Receptor Plug Domain KQ251_03490 PF04575 Protein of unknown function (DUF560) KQ251_03500 PF01126 Heme oxygenase KQ251_03525 PF13520 Amino acid permease KQ251_03530 PF02574 Homocysteine S-methyltransferase KQ251_03540 PF06039 Malate:quinone oxidoreductase (Mqo) KQ251_03545 PF05199 GMC oxidoreductase KQ251_03545 PF00732 GMC oxidoreductase KQ251_03550 PF00171 Aldehyde dehydrogenase family KQ251_03555 PF00440 Bacterial regulatory proteins, tetR family KQ251_03555 PF13977 BetI-type transcriptional repressor, C-terminal KQ251_03560 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_03565 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_03575 PF03061 Thioesterase superfamily KQ251_03585 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ251_03585 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ251_03590 PF00375 Sodium:dicarboxylate symporter family KQ251_03595 PF07152 YaeQ protein KQ251_03600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_03605 PF14883 Hypothetical glycosyl hydrolase family 13 KQ251_03605 PF01522 Polysaccharide deacetylase KQ251_03610 PF00535 Glycosyl transferase family 2 KQ251_03620 PF00378 Enoyl-CoA hydratase/isomerase KQ251_03635 PF09339 IclR helix-turn-helix domain KQ251_03635 PF01614 Bacterial transcriptional regulator KQ251_03640 PF00355 Rieske [2Fe-2S] domain KQ251_03650 PF00355 Rieske [2Fe-2S] domain KQ251_03660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_03665 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_03665 PF14759 Reductase C-terminal KQ251_03670 PF07690 Major Facilitator Superfamily KQ251_03680 PF12697 Alpha/beta hydrolase family KQ251_03690 PF01958 Domain of unknown function DUF108 KQ251_03690 PF03447 Homoserine dehydrogenase, NAD binding domain KQ251_03695 PF00171 Aldehyde dehydrogenase family KQ251_03700 PF00205 Thiamine pyrophosphate enzyme, central domain KQ251_03700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ251_03700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ251_03710 PF07690 Major Facilitator Superfamily KQ251_03715 PF01327 Polypeptide deformylase KQ251_03720 PF04960 Glutaminase KQ251_03725 PF02311 AraC-like ligand binding domain KQ251_03725 PF12833 Helix-turn-helix domain KQ251_03730 PF07690 Major Facilitator Superfamily KQ251_03735 PF01263 Aldose 1-epimerase KQ251_03745 PF03466 LysR substrate binding domain KQ251_03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_03755 PF07690 Major Facilitator Superfamily KQ251_03760 PF00456 Transketolase, thiamine diphosphate binding domain KQ251_03765 PF02779 Transketolase, pyrimidine binding domain KQ251_03765 PF02780 Transketolase, C-terminal domain KQ251_03770 PF02310 B12 binding domain KQ251_03770 PF02607 B12 binding domain KQ251_03770 PF02965 Vitamin B12 dependent methionine synthase, activation domain KQ251_03770 PF00809 Pterin binding enzyme KQ251_03770 PF02574 Homocysteine S-methyltransferase KQ251_03775 PF01384 Phosphate transporter family KQ251_03780 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_03795 PF03781 Sulfatase-modifying factor enzyme 1 KQ251_03800 PF00884 Sulfatase KQ251_03810 PF01106 NifU-like domain KQ251_03810 PF01521 Iron-sulphur cluster biosynthesis KQ251_03815 PF07715 TonB-dependent Receptor Plug Domain KQ251_03815 PF00593 TonB dependent receptor KQ251_03825 PF00561 alpha/beta hydrolase fold KQ251_03830 PF00484 Carbonic anhydrase KQ251_03835 PF13472 GDSL-like Lipase/Acylhydrolase family KQ251_03840 PF00005 ABC transporter KQ251_03850 PF01694 Rhomboid family KQ251_03855 PF00912 Transglycosylase KQ251_03860 PF02503 Polyphosphate kinase middle domain KQ251_03860 PF13090 Polyphosphate kinase C-terminal domain 2 KQ251_03860 PF17941 Polyphosphate kinase C-terminal domain 1 KQ251_03860 PF13089 Polyphosphate kinase N-terminal domain KQ251_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_03875 PF03466 LysR substrate binding domain KQ251_03880 PF00561 alpha/beta hydrolase fold KQ251_03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_03885 PF18113 Rubredoxin binding C-terminal domain KQ251_03890 PF00301 Rubredoxin KQ251_03905 PF00152 tRNA synthetases class II (D, K and N) KQ251_03905 PF01336 OB-fold nucleic acid binding domain KQ251_03910 PF14052 Capsule assembly protein Wzi KQ251_03920 PF01507 Phosphoadenosine phosphosulfate reductase family KQ251_03925 PF00009 Elongation factor Tu GTP binding domain KQ251_03940 PF03600 Citrate transporter KQ251_03945 PF00571 CBS domain KQ251_03945 PF03471 Transporter associated domain KQ251_03945 PF01595 Cyclin M transmembrane N-terminal domain KQ251_03950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_03950 PF03466 LysR substrate binding domain KQ251_03955 PF00463 Isocitrate lyase family KQ251_03970 PF01774 UreD urease accessory protein KQ251_03975 PF00547 Urease, gamma subunit KQ251_03980 PF00699 Urease beta subunit KQ251_03985 PF01979 Amidohydrolase family KQ251_03985 PF00449 Urease alpha-subunit, N-terminal domain KQ251_03990 PF05194 UreE urease accessory protein, C-terminal domain KQ251_03990 PF02814 UreE urease accessory protein, N-terminal domain KQ251_03995 PF01730 UreF KQ251_04000 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ251_04015 PF03717 Penicillin-binding Protein dimerisation domain KQ251_04015 PF00905 Penicillin binding protein transpeptidase domain KQ251_04030 PF05191 Adenylate kinase, active site lid KQ251_04040 PF10576 Iron-sulfur binding domain of endonuclease III KQ251_04040 PF00633 Helix-hairpin-helix motif KQ251_04040 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ251_04045 PF04060 Putative Fe-S cluster KQ251_04050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ251_04050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ251_04060 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KQ251_04065 PF02590 Predicted SPOUT methyltransferase KQ251_04070 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_04070 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ251_04070 PF02190 ATP-dependent protease La (LON) substrate-binding domain KQ251_04075 PF13018 Extended Signal Peptide of Type V secretion system KQ251_04075 PF03895 YadA-like membrane anchor domain KQ251_04075 PF05658 Head domain of trimeric autotransporter adhesin KQ251_04075 PF05662 Coiled stalk of trimeric autotransporter adhesin KQ251_04080 PF04355 SmpA / OmlA family KQ251_04080 PF00691 OmpA family KQ251_04085 PF01812 5-formyltetrahydrofolate cyclo-ligase family KQ251_04190 PF00772 DnaB-like helicase N terminal domain KQ251_04190 PF03796 DnaB-like helicase C terminal domain KQ251_04195 PF00145 C-5 cytosine-specific DNA methylase KQ251_04285 PF06381 Protein of unknown function (DUF1073) KQ251_04305 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) KQ251_04415 PF13438 Domain of unknown function (DUF4113) KQ251_04415 PF00817 impB/mucB/samB family KQ251_04415 PF11799 impB/mucB/samB family C-terminal domain KQ251_04420 PF00717 Peptidase S24-like KQ251_04425 PF00589 Phage integrase family KQ251_04425 PF13356 Arm DNA-binding domain KQ251_04435 PF00854 POT family KQ251_04440 PF00120 Glutamine synthetase, catalytic domain KQ251_04440 PF03951 Glutamine synthetase, beta-Grasp domain KQ251_04445 PF04345 Chorismate lyase KQ251_04450 PF01040 UbiA prenyltransferase family KQ251_04485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KQ251_04485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KQ251_04490 PF01784 NIF3 (NGG1p interacting factor 3) KQ251_04495 PF13180 PDZ domain KQ251_04500 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ251_04500 PF01743 Poly A polymerase head domain KQ251_04505 PF03949 Malic enzyme, NAD binding domain KQ251_04505 PF01515 Phosphate acetyl/butaryl transferase KQ251_04505 PF00390 Malic enzyme, N-terminal domain KQ251_04510 PF00563 EAL domain KQ251_04510 PF00990 Diguanylate cyclase, GGDEF domain KQ251_04510 PF03707 Bacterial signalling protein N terminal repeat KQ251_04515 PF04452 RNA methyltransferase KQ251_04520 PF02219 Methylenetetrahydrofolate reductase KQ251_04525 PF05221 S-adenosyl-L-homocysteine hydrolase KQ251_04525 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KQ251_04540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_04540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_04540 PF09317 Domain of unknown function (DUF1974) KQ251_04545 PF04055 Radical SAM superfamily KQ251_04550 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_04550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_04560 PF07690 Major Facilitator Superfamily KQ251_04570 PF00557 Metallopeptidase family M24 KQ251_04575 PF00318 Ribosomal protein S2 KQ251_04580 PF00889 Elongation factor TS KQ251_04590 PF12833 Helix-turn-helix domain KQ251_04610 PF03330 Lytic transglycolase KQ251_04610 PF05036 Sporulation related domain KQ251_04615 PF13406 Transglycosylase SLT domain KQ251_04620 PF01098 Cell cycle protein KQ251_04630 PF14489 QueF-like protein KQ251_04630 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KQ251_04635 PF01061 ABC-2 type transporter KQ251_04640 PF00005 ABC transporter KQ251_04670 PF00464 Serine hydroxymethyltransferase KQ251_04675 PF02321 Outer membrane efflux protein KQ251_04680 PF00873 AcrB/AcrD/AcrF family KQ251_04685 PF13533 Biotin-lipoyl like KQ251_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_04690 PF03466 LysR substrate binding domain KQ251_04695 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_04700 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_04705 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_04710 PF00005 ABC transporter KQ251_04715 PF00893 Small Multidrug Resistance protein KQ251_04720 PF00037 4Fe-4S binding domain KQ251_04725 PF01136 Peptidase family U32 KQ251_04725 PF16325 Peptidase family U32 C-terminal domain KQ251_04730 PF00155 Aminotransferase class I and II KQ251_04730 PF00392 Bacterial regulatory proteins, gntR family KQ251_04735 PF02567 Phenazine biosynthesis-like protein KQ251_04740 PF00970 Oxidoreductase FAD-binding domain KQ251_04740 PF00175 Oxidoreductase NAD-binding domain KQ251_04745 PF18389 TrmO C-terminal domain KQ251_04745 PF01980 tRNA-methyltransferase O KQ251_04755 PF00437 Type II/IV secretion system protein KQ251_04755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ251_04765 PF00486 Transcriptional regulatory protein, C terminal KQ251_04765 PF00072 Response regulator receiver domain KQ251_04770 PF00512 His Kinase A (phospho-acceptor) domain KQ251_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_04770 PF08521 Two-component sensor kinase N-terminal KQ251_04780 PF00293 NUDIX domain KQ251_04790 PF00905 Penicillin binding protein transpeptidase domain KQ251_04790 PF14814 Bifunctional transglycosylase second domain KQ251_04790 PF00912 Transglycosylase KQ251_04795 PF01513 ATP-NAD kinase KQ251_04800 PF07023 Protein of unknown function (DUF1315) KQ251_04805 PF02885 Glycosyl transferase family, helical bundle domain KQ251_04805 PF00591 Glycosyl transferase family, a/b domain KQ251_04810 PF00375 Sodium:dicarboxylate symporter family KQ251_04815 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_04815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_04815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_04825 PF01842 ACT domain KQ251_04825 PF01817 Chorismate mutase type II KQ251_04825 PF00800 Prephenate dehydratase KQ251_04830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ251_04840 PF07687 Peptidase dimerisation domain KQ251_04840 PF01546 Peptidase family M20/M25/M40 KQ251_04845 PF00753 Metallo-beta-lactamase superfamily KQ251_04860 PF13737 Transposase DDE domain KQ251_04875 PF05690 Thiazole biosynthesis protein ThiG KQ251_04885 PF04241 Protein of unknown function (DUF423) KQ251_04890 PF00140 Sigma-70 factor, region 1.2 KQ251_04890 PF04542 Sigma-70 region 2 KQ251_04890 PF04545 Sigma-70, region 4 KQ251_04900 PF00313 'Cold-shock' DNA-binding domain KQ251_04905 PF00270 DEAD/DEAH box helicase KQ251_04905 PF00271 Helicase conserved C-terminal domain KQ251_04915 PF00881 Nitroreductase family KQ251_04920 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KQ251_04920 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KQ251_04940 PF01180 Dihydroorotate dehydrogenase KQ251_04945 PF02674 Colicin V production protein KQ251_04950 PF00156 Phosphoribosyl transferase domain KQ251_04965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ251_04965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ251_04970 PF01435 Peptidase family M48 KQ251_04975 PF09424 Yqey-like protein KQ251_04980 PF01165 Ribosomal protein S21 KQ251_04985 PF00814 Glycoprotease family KQ251_05005 PF00069 Protein kinase domain KQ251_05030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KQ251_05030 PF17287 POTRA domain KQ251_05030 PF08479 POTRA domain, ShlB-type KQ251_05035 PF05860 haemagglutination activity domain KQ251_05035 PF13332 Hemagglutinin repeat KQ251_05035 PF13018 Extended Signal Peptide of Type V secretion system KQ251_05035 PF04829 Pre-toxin domain with VENN motif KQ251_05055 PF13737 Transposase DDE domain KQ251_05065 PF03466 LysR substrate binding domain KQ251_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_05070 PF00202 Aminotransferase class-III KQ251_05075 PF00171 Aldehyde dehydrogenase family KQ251_05080 PF00324 Amino acid permease KQ251_05110 PF04076 Bacterial OB fold (BOF) protein KQ251_05135 PF00561 alpha/beta hydrolase fold KQ251_05140 PF03616 Sodium/glutamate symporter KQ251_05150 PF07729 FCD domain KQ251_05150 PF00392 Bacterial regulatory proteins, gntR family KQ251_05195 PF08946 Osmosensory transporter coiled coil KQ251_05195 PF00083 Sugar (and other) transporter KQ251_05220 PF04403 Paraquat-inducible protein A KQ251_05225 PF02470 MlaD protein KQ251_05240 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_05240 PF00085 Thioredoxin KQ251_05245 PF01177 Asp/Glu/Hydantoin racemase KQ251_05250 PF00892 EamA-like transporter family KQ251_05255 PF07995 Glucose / Sorbosone dehydrogenase KQ251_05275 PF00375 Sodium:dicarboxylate symporter family KQ251_05285 PF00753 Metallo-beta-lactamase superfamily KQ251_05285 PF16123 Hydroxyacylglutathione hydrolase C-terminus KQ251_05290 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_05295 PF00005 ABC transporter KQ251_05295 PF09383 NIL domain KQ251_05300 PF03180 NLPA lipoprotein KQ251_05305 PF02843 Phosphoribosylglycinamide synthetase, C domain KQ251_05305 PF02844 Phosphoribosylglycinamide synthetase, N domain KQ251_05305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KQ251_05310 PF01808 AICARFT/IMPCHase bienzyme KQ251_05310 PF02142 MGS-like domain KQ251_05315 PF02954 Bacterial regulatory protein, Fis family KQ251_05335 PF01134 Glucose inhibited division protein A KQ251_05335 PF13932 GidA associated domain KQ251_05345 PF14403 Circularly permuted ATP-grasp type 2 KQ251_05355 PF08379 Bacterial transglutaminase-like N-terminal region KQ251_05355 PF01841 Transglutaminase-like superfamily KQ251_05365 PF00842 Alanine racemase, C-terminal domain KQ251_05365 PF01168 Alanine racemase, N-terminal domain KQ251_05370 PF00772 DnaB-like helicase N terminal domain KQ251_05370 PF03796 DnaB-like helicase C terminal domain KQ251_05375 PF03948 Ribosomal protein L9, C-terminal domain KQ251_05375 PF01281 Ribosomal protein L9, N-terminal domain KQ251_05380 PF01084 Ribosomal protein S18 KQ251_05385 PF01250 Ribosomal protein S6 KQ251_05390 PF01040 UbiA prenyltransferase family KQ251_05395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KQ251_05400 PF00510 Cytochrome c oxidase subunit III KQ251_05405 PF00115 Cytochrome C and Quinol oxidase polypeptide I KQ251_05410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KQ251_05410 PF06481 COX Aromatic Rich Motif KQ251_05420 PF00391 PEP-utilising enzyme, mobile domain KQ251_05420 PF02896 PEP-utilising enzyme, TIM barrel domain KQ251_05420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KQ251_05425 PF03618 Kinase/pyrophosphorylase KQ251_05435 PF01522 Polysaccharide deacetylase KQ251_05435 PF14883 Hypothetical glycosyl hydrolase family 13 KQ251_05440 PF00535 Glycosyl transferase family 2 KQ251_05445 PF13994 PgaD-like protein KQ251_05455 PF00296 Luciferase-like monooxygenase KQ251_05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_05470 PF03466 LysR substrate binding domain KQ251_05480 PF03462 PCRF domain KQ251_05480 PF00472 RF-1 domain KQ251_05485 PF13847 Methyltransferase domain KQ251_05485 PF17827 PrmC N-terminal domain KQ251_05490 PF12833 Helix-turn-helix domain KQ251_05495 PF00106 short chain dehydrogenase KQ251_05500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_05500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_05500 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_05505 PF00501 AMP-binding enzyme KQ251_05505 PF13193 AMP-binding enzyme C-terminal domain KQ251_05510 PF01613 Flavin reductase like domain KQ251_05515 PF00899 ThiF family KQ251_05520 PF03109 ABC1 family KQ251_05535 PF03814 Potassium-transporting ATPase A subunit KQ251_05545 PF02669 K+-transporting ATPase, c chain KQ251_05550 PF00512 His Kinase A (phospho-acceptor) domain KQ251_05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_05550 PF13493 Domain of unknown function (DUF4118) KQ251_05550 PF02702 Osmosensitive K+ channel His kinase sensor domain KQ251_05555 PF00072 Response regulator receiver domain KQ251_05555 PF00486 Transcriptional regulatory protein, C terminal KQ251_05560 PF00120 Glutamine synthetase, catalytic domain KQ251_05570 PF03232 Ubiquinone biosynthesis protein COQ7 KQ251_05575 PF07690 Major Facilitator Superfamily KQ251_05580 PF01103 Surface antigen KQ251_05580 PF07244 Surface antigen variable number repeat KQ251_05580 PF17243 POTRA domain TamA domain 1 KQ251_05595 PF00330 Aconitase family (aconitate hydratase) KQ251_05595 PF06434 Aconitate hydratase 2 N-terminus KQ251_05595 PF11791 Aconitate B N-terminal domain KQ251_05605 PF00027 Cyclic nucleotide-binding domain KQ251_05605 PF00520 Ion transport protein KQ251_05610 PF07690 Major Facilitator Superfamily KQ251_05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_05625 PF03466 LysR substrate binding domain KQ251_05630 PF04284 Protein of unknown function (DUF441) KQ251_05640 PF00849 RNA pseudouridylate synthase KQ251_05640 PF01479 S4 domain KQ251_05655 PF00849 RNA pseudouridylate synthase KQ251_05655 PF01479 S4 domain KQ251_05660 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KQ251_05665 PF01119 DNA mismatch repair protein, C-terminal domain KQ251_05665 PF08676 MutL C terminal dimerisation domain KQ251_05675 PF17209 Hfq protein KQ251_05685 PF00881 Nitroreductase family KQ251_05695 PF00149 Calcineurin-like phosphoesterase KQ251_05700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ251_05705 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ251_05705 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KQ251_05710 PF00117 Glutamine amidotransferase class-I KQ251_05710 PF00958 GMP synthase C terminal domain KQ251_05710 PF02540 NAD synthase KQ251_05715 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KQ251_05720 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KQ251_05725 PF13520 Amino acid permease KQ251_05730 PF00171 Aldehyde dehydrogenase family KQ251_05745 PF00465 Iron-containing alcohol dehydrogenase KQ251_05750 PF05970 PIF1-like helicase KQ251_05750 PF14493 Helix-turn-helix domain KQ251_05760 PF02110 Hydroxyethylthiazole kinase family KQ251_05775 PF01433 Peptidase family M1 domain KQ251_05775 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KQ251_05775 PF11940 Domain of unknown function (DUF3458) Ig-like fold KQ251_05790 PF00577 Outer membrane usher protein KQ251_05790 PF13954 PapC N-terminal domain KQ251_05790 PF13953 PapC C-terminal domain KQ251_05805 PF13817 IS66 C-terminal element KQ251_05805 PF03050 Transposase IS66 family KQ251_05805 PF13005 zinc-finger binding domain of transposase IS66 KQ251_05805 PF13007 Transposase C of IS166 homeodomain KQ251_05835 PF01817 Chorismate mutase type II KQ251_05840 PF01037 Lrp/AsnC ligand binding domain KQ251_05850 PF00440 Bacterial regulatory proteins, tetR family KQ251_05855 PF00593 TonB dependent receptor KQ251_05855 PF07715 TonB-dependent Receptor Plug Domain KQ251_05860 PF00924 Mechanosensitive ion channel KQ251_05890 PF00593 TonB dependent receptor KQ251_05890 PF07715 TonB-dependent Receptor Plug Domain KQ251_05910 PF12848 ABC transporter KQ251_05910 PF00005 ABC transporter KQ251_05915 PF00582 Universal stress protein family KQ251_05935 PF00689 Cation transporting ATPase, C-terminus KQ251_05935 PF00690 Cation transporter/ATPase, N-terminus KQ251_05940 PF02308 MgtC family KQ251_05950 PF13936 Helix-turn-helix domain KQ251_05950 PF00665 Integrase core domain KQ251_05960 PF01037 Lrp/AsnC ligand binding domain KQ251_05965 PF01810 LysE type translocator KQ251_05970 PF00923 Transaldolase/Fructose-6-phosphate aldolase KQ251_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_05975 PF03466 LysR substrate binding domain KQ251_05985 PF02803 Thiolase, C-terminal domain KQ251_05985 PF00108 Thiolase, N-terminal domain KQ251_05995 PF01575 MaoC like domain KQ251_06000 PF00144 Beta-lactamase KQ251_06010 PF07690 Major Facilitator Superfamily KQ251_06015 PF12169 DNA polymerase III subunits gamma and tau domain III KQ251_06015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KQ251_06015 PF12170 DNA polymerase III tau subunit V interacting with alpha KQ251_06025 PF05506 Domain of unknown function (DUF756) KQ251_06025 PF04185 Phosphoesterase family KQ251_06030 PF03061 Thioesterase superfamily KQ251_06035 PF00465 Iron-containing alcohol dehydrogenase KQ251_06045 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ251_06050 PF01565 FAD binding domain KQ251_06050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KQ251_06065 PF01645 Conserved region in glutamate synthase KQ251_06085 PF12832 MFS_1 like family KQ251_06095 PF02785 Biotin carboxylase C-terminal domain KQ251_06095 PF00289 Biotin carboxylase, N-terminal domain KQ251_06095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_06100 PF00364 Biotin-requiring enzyme KQ251_06105 PF01220 Dehydroquinase class II KQ251_06110 PF00817 impB/mucB/samB family KQ251_06110 PF11799 impB/mucB/samB family C-terminal domain KQ251_06110 PF13438 Domain of unknown function (DUF4113) KQ251_06115 PF00005 ABC transporter KQ251_06120 PF00072 Response regulator receiver domain KQ251_06120 PF00486 Transcriptional regulatory protein, C terminal KQ251_06130 PF04324 BFD-like [2Fe-2S] binding domain KQ251_06130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ251_06130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ251_06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_06130 PF13806 Rieske-like [2Fe-2S] domain KQ251_06130 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ251_06135 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_06135 PF04324 BFD-like [2Fe-2S] binding domain KQ251_06135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ251_06135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ251_06135 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ251_06140 PF04324 BFD-like [2Fe-2S] binding domain KQ251_06140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ251_06140 PF00384 Molybdopterin oxidoreductase KQ251_06140 PF01568 Molydopterin dinucleotide binding domain KQ251_06145 PF12804 MobA-like NTP transferase domain KQ251_06150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ251_06150 PF00384 Molybdopterin oxidoreductase KQ251_06150 PF01568 Molydopterin dinucleotide binding domain KQ251_06155 PF06463 Molybdenum Cofactor Synthesis C KQ251_06155 PF04055 Radical SAM superfamily KQ251_06165 PF02391 MoaE protein KQ251_06170 PF01967 MoaC family KQ251_06170 PF00994 Probable molybdopterin binding domain KQ251_06175 PF03453 MoeA N-terminal region (domain I and II) KQ251_06175 PF00994 Probable molybdopterin binding domain KQ251_06175 PF03454 MoeA C-terminal region (domain IV) KQ251_06180 PF01638 HxlR-like helix-turn-helix KQ251_06185 PF00155 Aminotransferase class I and II KQ251_06185 PF00392 Bacterial regulatory proteins, gntR family KQ251_06190 PF00892 EamA-like transporter family KQ251_06210 PF02635 DsrE/DsrF-like family KQ251_06215 PF16363 GDP-mannose 4,6 dehydratase KQ251_06220 PF10415 Fumarase C C-terminus KQ251_06220 PF00206 Lyase KQ251_06240 PF01266 FAD dependent oxidoreductase KQ251_06250 PF02542 YgbB family KQ251_06260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ251_06260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ251_06265 PF00440 Bacterial regulatory proteins, tetR family KQ251_06270 PF02954 Bacterial regulatory protein, Fis family KQ251_06270 PF00158 Sigma-54 interaction domain KQ251_06270 PF00072 Response regulator receiver domain KQ251_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_06275 PF00512 His Kinase A (phospho-acceptor) domain KQ251_06275 PF00989 PAS fold KQ251_06280 PF04055 Radical SAM superfamily KQ251_06280 PF18693 TRAM domain KQ251_06280 PF00919 Uncharacterized protein family UPF0004 KQ251_06285 PF00696 Amino acid kinase family KQ251_06290 PF01765 Ribosome recycling factor KQ251_06295 PF01255 Putative undecaprenyl diphosphate synthase KQ251_06305 PF13288 DXP reductoisomerase C-terminal domain KQ251_06305 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KQ251_06305 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KQ251_06310 PF13180 PDZ domain KQ251_06310 PF17820 PDZ domain KQ251_06310 PF02163 Peptidase family M50 KQ251_06315 PF01103 Surface antigen KQ251_06315 PF07244 Surface antigen variable number repeat KQ251_06325 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_06325 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KQ251_06330 PF07977 FabA-like domain KQ251_06335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KQ251_06335 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_06350 PF02631 RecX family KQ251_06355 PF00154 recA bacterial DNA recombination protein KQ251_06360 PF01479 S4 domain KQ251_06365 PF13419 Haloacid dehalogenase-like hydrolase KQ251_06390 PF01037 Lrp/AsnC ligand binding domain KQ251_06395 PF00266 Aminotransferase class-V KQ251_06400 PF00324 Amino acid permease KQ251_06410 PF05922 Peptidase inhibitor I9 KQ251_06410 PF00082 Subtilase family KQ251_06415 PF00916 Sulfate permease family KQ251_06415 PF01740 STAS domain KQ251_06430 PF03050 Transposase IS66 family KQ251_06430 PF13005 zinc-finger binding domain of transposase IS66 KQ251_06430 PF13007 Transposase C of IS166 homeodomain KQ251_06430 PF13817 IS66 C-terminal element KQ251_06435 PF02586 SOS response associated peptidase (SRAP) KQ251_06440 PF07995 Glucose / Sorbosone dehydrogenase KQ251_06450 PF03707 Bacterial signalling protein N terminal repeat KQ251_06450 PF00990 Diguanylate cyclase, GGDEF domain KQ251_06450 PF00563 EAL domain KQ251_06470 PF02378 Phosphotransferase system, EIIC KQ251_06470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KQ251_06475 PF00294 pfkB family carbohydrate kinase KQ251_06480 PF05524 PEP-utilising enzyme, N-terminal KQ251_06480 PF00391 PEP-utilising enzyme, mobile domain KQ251_06480 PF02896 PEP-utilising enzyme, TIM barrel domain KQ251_06480 PF00381 PTS HPr component phosphorylation site KQ251_06480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KQ251_06505 PF05525 Branched-chain amino acid transport protein KQ251_06510 PF00557 Metallopeptidase family M24 KQ251_06515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_06515 PF03466 LysR substrate binding domain KQ251_06525 PF00462 Glutaredoxin KQ251_06530 PF00202 Aminotransferase class-III KQ251_06535 PF00571 CBS domain KQ251_06535 PF00478 IMP dehydrogenase / GMP reductase domain KQ251_06560 PF00448 SRP54-type protein, GTPase domain KQ251_06560 PF02881 SRP54-type protein, helical bundle domain KQ251_06570 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KQ251_06585 PF08173 Membrane bound YbgT-like protein KQ251_06590 PF02322 Cytochrome bd terminal oxidase subunit II KQ251_06595 PF01654 Cytochrome bd terminal oxidase subunit I KQ251_06605 PF00665 Integrase core domain KQ251_06605 PF13936 Helix-turn-helix domain KQ251_06610 PF01636 Phosphotransferase enzyme family KQ251_06615 PF13936 Helix-turn-helix domain KQ251_06615 PF00665 Integrase core domain KQ251_06620 PF00665 Integrase core domain KQ251_06620 PF13936 Helix-turn-helix domain KQ251_06630 PF07290 Protein of unknown function (DUF1449) KQ251_06640 PF00294 pfkB family carbohydrate kinase KQ251_06645 PF07715 TonB-dependent Receptor Plug Domain KQ251_06645 PF00593 TonB dependent receptor KQ251_06650 PF00675 Insulinase (Peptidase family M16) KQ251_06650 PF05193 Peptidase M16 inactive domain KQ251_06650 PF08367 Peptidase M16C associated KQ251_06655 PF02253 Phospholipase A1 KQ251_06660 PF02386 Cation transport protein KQ251_06665 PF02080 TrkA-C domain KQ251_06665 PF02254 TrkA-N domain KQ251_06670 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_06670 PF00585 C-terminal regulatory domain of Threonine dehydratase KQ251_06675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KQ251_06690 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ251_06690 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ251_06700 PF02617 ATP-dependent Clp protease adaptor protein ClpS KQ251_06705 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_06705 PF07724 AAA domain (Cdc48 subfamily) KQ251_06705 PF17871 AAA lid domain KQ251_06705 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_06705 PF02861 Clp amino terminal domain, pathogenicity island component KQ251_06710 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KQ251_06715 PF00793 DAHP synthetase I family KQ251_06730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_06730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_06760 PF06418 CTP synthase N-terminus KQ251_06760 PF00117 Glutamine amidotransferase class-I KQ251_06765 PF00793 DAHP synthetase I family KQ251_06770 PF03952 Enolase, N-terminal domain KQ251_06770 PF00113 Enolase, C-terminal TIM barrel domain KQ251_06775 PF04239 Protein of unknown function (DUF421) KQ251_06780 PF04977 Septum formation initiator KQ251_06785 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KQ251_06790 PF01144 Coenzyme A transferase KQ251_06795 PF01144 Coenzyme A transferase KQ251_06800 PF00108 Thiolase, N-terminal domain KQ251_06800 PF02803 Thiolase, C-terminal domain KQ251_06805 PF00206 Lyase KQ251_06805 PF10397 Adenylosuccinate lyase C-terminus KQ251_06810 PF00561 alpha/beta hydrolase fold KQ251_06815 PF07690 Major Facilitator Superfamily KQ251_06820 PF02627 Carboxymuconolactone decarboxylase family KQ251_06825 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KQ251_06825 PF00775 Dioxygenase KQ251_06830 PF00775 Dioxygenase KQ251_06835 PF01487 Type I 3-dehydroquinase KQ251_06840 PF05048 Periplasmic copper-binding protein (NosD) KQ251_06845 PF04966 Carbohydrate-selective porin, OprB family KQ251_06850 PF01011 PQQ enzyme repeat KQ251_06850 PF13360 PQQ-like domain KQ251_06860 PF04143 Sulphur transport KQ251_06870 PF00753 Metallo-beta-lactamase superfamily KQ251_06875 PF09339 IclR helix-turn-helix domain KQ251_06875 PF01614 Bacterial transcriptional regulator KQ251_06880 PF03466 LysR substrate binding domain KQ251_06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_06885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_06885 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_06885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_06900 PF00106 short chain dehydrogenase KQ251_06910 PF07690 Major Facilitator Superfamily KQ251_06920 PF01425 Amidase KQ251_06925 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_06940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_06940 PF00355 Rieske [2Fe-2S] domain KQ251_06955 PF00175 Oxidoreductase NAD-binding domain KQ251_06955 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_06960 PF01613 Flavin reductase like domain KQ251_06965 PF02311 AraC-like ligand binding domain KQ251_06965 PF12833 Helix-turn-helix domain KQ251_06970 PF01179 Copper amine oxidase, enzyme domain KQ251_06970 PF02728 Copper amine oxidase, N3 domain KQ251_06970 PF02727 Copper amine oxidase, N2 domain KQ251_06970 PF07833 Copper amine oxidase N-terminal domain KQ251_06980 PF00171 Aldehyde dehydrogenase family KQ251_06985 PF01804 Penicillin amidase KQ251_06990 PF12146 Serine aminopeptidase, S33 KQ251_06995 PF02803 Thiolase, C-terminal domain KQ251_06995 PF00108 Thiolase, N-terminal domain KQ251_07000 PF01144 Coenzyme A transferase KQ251_07005 PF01144 Coenzyme A transferase KQ251_07010 PF00775 Dioxygenase KQ251_07010 PF04444 Catechol dioxygenase N terminus KQ251_07015 PF02426 Muconolactone delta-isomerase KQ251_07020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KQ251_07020 PF13378 Enolase C-terminal domain-like KQ251_07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07025 PF03466 LysR substrate binding domain KQ251_07035 PF00392 Bacterial regulatory proteins, gntR family KQ251_07035 PF07729 FCD domain KQ251_07040 PF00920 Dehydratase family KQ251_07045 PF07690 Major Facilitator Superfamily KQ251_07055 PF00171 Aldehyde dehydrogenase family KQ251_07065 PF00561 alpha/beta hydrolase fold KQ251_07070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_07085 PF13411 MerR HTH family regulatory protein KQ251_07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_07105 PF12706 Beta-lactamase superfamily domain KQ251_07110 PF00440 Bacterial regulatory proteins, tetR family KQ251_07110 PF08359 YsiA-like protein, C-terminal region KQ251_07120 PF00857 Isochorismatase family KQ251_07125 PF03466 LysR substrate binding domain KQ251_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07130 PF07995 Glucose / Sorbosone dehydrogenase KQ251_07135 PF02254 TrkA-N domain KQ251_07135 PF00999 Sodium/hydrogen exchanger family KQ251_07145 PF07687 Peptidase dimerisation domain KQ251_07145 PF01546 Peptidase family M20/M25/M40 KQ251_07180 PF13737 Transposase DDE domain KQ251_07195 PF07690 Major Facilitator Superfamily KQ251_07200 PF04909 Amidohydrolase KQ251_07215 PF08450 SMP-30/Gluconolactonase/LRE-like region KQ251_07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07225 PF03466 LysR substrate binding domain KQ251_07240 PF13533 Biotin-lipoyl like KQ251_07255 PF00171 Aldehyde dehydrogenase family KQ251_07260 PF00920 Dehydratase family KQ251_07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07270 PF03466 LysR substrate binding domain KQ251_07275 PF01370 NAD dependent epimerase/dehydratase family KQ251_07280 PF07690 Major Facilitator Superfamily KQ251_07285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ251_07285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ251_07290 PF12833 Helix-turn-helix domain KQ251_07290 PF06719 AraC-type transcriptional regulator N-terminus KQ251_07305 PF00107 Zinc-binding dehydrogenase KQ251_07305 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_07315 PF01032 FecCD transport family KQ251_07320 PF00005 ABC transporter KQ251_07340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ251_07340 PF14572 Phosphoribosyl synthetase-associated domain KQ251_07345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ251_07380 PF00196 Bacterial regulatory proteins, luxR family KQ251_07385 PF01425 Amidase KQ251_07390 PF13533 Biotin-lipoyl like KQ251_07395 PF07690 Major Facilitator Superfamily KQ251_07420 PF01975 Survival protein SurE KQ251_07430 PF02824 TGS domain KQ251_07430 PF04607 Region found in RelA / SpoT proteins KQ251_07430 PF13291 ACT domain KQ251_07475 PF12146 Serine aminopeptidase, S33 KQ251_07480 PF12833 Helix-turn-helix domain KQ251_07480 PF02311 AraC-like ligand binding domain KQ251_07490 PF00512 His Kinase A (phospho-acceptor) domain KQ251_07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_07490 PF00672 HAMP domain KQ251_07490 PF16527 Two-component sensor protein CpxA, periplasmic domain KQ251_07495 PF00486 Transcriptional regulatory protein, C terminal KQ251_07495 PF00072 Response regulator receiver domain KQ251_07500 PF00529 HlyD membrane-fusion protein of T1SS KQ251_07500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_07505 PF00873 AcrB/AcrD/AcrF family KQ251_07510 PF17760 UvrA interaction domain KQ251_07510 PF17755 UvrA DNA-binding domain KQ251_07510 PF00005 ABC transporter KQ251_07515 PF13936 Helix-turn-helix domain KQ251_07515 PF00665 Integrase core domain KQ251_07520 PF16970 Type-1 fimbrial protein, A KQ251_07525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ251_07525 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ251_07530 PF13954 PapC N-terminal domain KQ251_07530 PF00577 Outer membrane usher protein KQ251_07530 PF13953 PapC C-terminal domain KQ251_07535 PF00419 Fimbrial protein KQ251_07545 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_07545 PF00107 Zinc-binding dehydrogenase KQ251_07555 PF00199 Catalase KQ251_07570 PF13091 PLD-like domain KQ251_07590 PF01244 Membrane dipeptidase (Peptidase family M19) KQ251_07595 PF04055 Radical SAM superfamily KQ251_07595 PF13186 Iron-sulfur cluster-binding domain KQ251_07600 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KQ251_07605 PF03070 TENA/THI-4/PQQC family KQ251_07610 PF12706 Beta-lactamase superfamily domain KQ251_07615 PF08042 PqqA family KQ251_07620 PF02503 Polyphosphate kinase middle domain KQ251_07620 PF13089 Polyphosphate kinase N-terminal domain KQ251_07620 PF13090 Polyphosphate kinase C-terminal domain 2 KQ251_07620 PF17941 Polyphosphate kinase C-terminal domain 1 KQ251_07625 PF00149 Calcineurin-like phosphoesterase KQ251_07635 PF00857 Isochorismatase family KQ251_07635 PF00550 Phosphopantetheine attachment site KQ251_07640 PF00106 short chain dehydrogenase KQ251_07645 PF03459 TOBE domain KQ251_07645 PF00005 ABC transporter KQ251_07650 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_07660 PF03459 TOBE domain KQ251_07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07665 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_07665 PF00355 Rieske [2Fe-2S] domain KQ251_07670 PF00866 Ring hydroxylating beta subunit KQ251_07675 PF00175 Oxidoreductase NAD-binding domain KQ251_07675 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_07675 PF00970 Oxidoreductase FAD-binding domain KQ251_07680 PF12833 Helix-turn-helix domain KQ251_07680 PF14525 AraC-binding-like domain KQ251_07690 PF01613 Flavin reductase like domain KQ251_07705 PF01738 Dienelactone hydrolase family KQ251_07710 PF07690 Major Facilitator Superfamily KQ251_07715 PF12833 Helix-turn-helix domain KQ251_07715 PF06719 AraC-type transcriptional regulator N-terminus KQ251_07735 PF03466 LysR substrate binding domain KQ251_07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07740 PF01144 Coenzyme A transferase KQ251_07745 PF01144 Coenzyme A transferase KQ251_07755 PF00108 Thiolase, N-terminal domain KQ251_07755 PF02803 Thiolase, C-terminal domain KQ251_07760 PF03466 LysR substrate binding domain KQ251_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07765 PF03466 LysR substrate binding domain KQ251_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_07780 PF00206 Lyase KQ251_07780 PF10415 Fumarase C C-terminus KQ251_07785 PF00593 TonB dependent receptor KQ251_07785 PF07715 TonB-dependent Receptor Plug Domain KQ251_07790 PF00083 Sugar (and other) transporter KQ251_07805 PF00005 ABC transporter KQ251_07810 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_07815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ251_07830 PF00392 Bacterial regulatory proteins, gntR family KQ251_07830 PF07702 UTRA domain KQ251_07840 PF02525 Flavodoxin-like fold KQ251_07845 PF01638 HxlR-like helix-turn-helix KQ251_07850 PF06445 GyrI-like small molecule binding domain KQ251_07850 PF12833 Helix-turn-helix domain KQ251_07865 PF01925 Sulfite exporter TauE/SafE KQ251_07870 PF00753 Metallo-beta-lactamase superfamily KQ251_07870 PF04273 Putative phosphatase (DUF442) KQ251_07875 PF00753 Metallo-beta-lactamase superfamily KQ251_07875 PF04273 Putative phosphatase (DUF442) KQ251_07880 PF02954 Bacterial regulatory protein, Fis family KQ251_07880 PF00158 Sigma-54 interaction domain KQ251_07880 PF00072 Response regulator receiver domain KQ251_07885 PF01062 Bestrophin, RFP-TM, chloride channel KQ251_07890 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_07890 PF00107 Zinc-binding dehydrogenase KQ251_07895 PF00106 short chain dehydrogenase KQ251_07900 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_07900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_07905 PF02817 e3 binding domain KQ251_07905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ251_07905 PF00364 Biotin-requiring enzyme KQ251_07910 PF02780 Transketolase, C-terminal domain KQ251_07910 PF02779 Transketolase, pyrimidine binding domain KQ251_07915 PF00676 Dehydrogenase E1 component KQ251_07920 PF04055 Radical SAM superfamily KQ251_07935 PF00990 Diguanylate cyclase, GGDEF domain KQ251_07935 PF08448 PAS fold KQ251_07940 PF01264 Chorismate synthase KQ251_07945 PF05175 Methyltransferase small domain KQ251_07950 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_07960 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_07960 PF17862 AAA+ lid domain KQ251_07960 PF01434 Peptidase family M41 KQ251_08000 PF00570 HRDC domain KQ251_08000 PF01612 3'-5' exonuclease KQ251_08005 PF02132 RecR protein KQ251_08005 PF13662 Toprim domain KQ251_08010 PF02575 YbaB/EbfC DNA-binding family KQ251_08020 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ251_08025 PF00561 alpha/beta hydrolase fold KQ251_08030 PF08241 Methyltransferase domain KQ251_08060 PF01230 HIT domain KQ251_08095 PF00005 ABC transporter KQ251_08110 PF02684 Lipid-A-disaccharide synthetase KQ251_08115 PF07715 TonB-dependent Receptor Plug Domain KQ251_08115 PF00593 TonB dependent receptor KQ251_08135 PF01925 Sulfite exporter TauE/SafE KQ251_08140 PF00793 DAHP synthetase I family KQ251_08145 PF02654 Cobalamin-5-phosphate synthase KQ251_08155 PF00300 Histidine phosphatase superfamily (branch 1) KQ251_08160 PF02277 Phosphoribosyltransferase KQ251_08165 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KQ251_08175 PF13419 Haloacid dehalogenase-like hydrolase KQ251_08200 PF07715 TonB-dependent Receptor Plug Domain KQ251_08200 PF00593 TonB dependent receptor KQ251_08215 PF04183 IucA / IucC family KQ251_08215 PF06276 Ferric iron reductase FhuF-like transporter KQ251_08220 PF06276 Ferric iron reductase FhuF-like transporter KQ251_08220 PF04183 IucA / IucC family KQ251_08225 PF07690 Major Facilitator Superfamily KQ251_08230 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ251_08235 PF06276 Ferric iron reductase FhuF-like transporter KQ251_08235 PF04183 IucA / IucC family KQ251_08240 PF04073 Aminoacyl-tRNA editing domain KQ251_08250 PF03109 ABC1 family KQ251_08255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_08255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_08255 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_08260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_08260 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_08260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_08265 PF00487 Fatty acid desaturase KQ251_08270 PF12833 Helix-turn-helix domain KQ251_08270 PF12852 Cupin KQ251_08275 PF09312 SurA N-terminal domain KQ251_08275 PF00639 PPIC-type PPIASE domain KQ251_08280 PF00216 Bacterial DNA-binding protein KQ251_08295 PF02082 Transcriptional regulator KQ251_08300 PF00266 Aminotransferase class-V KQ251_08305 PF01592 NifU-like N terminal domain KQ251_08310 PF01521 Iron-sulphur cluster biosynthesis KQ251_08315 PF00226 DnaJ domain KQ251_08315 PF07743 HSCB C-terminal oligomerisation domain KQ251_08320 PF00012 Hsp70 protein KQ251_08325 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_08330 PF00211 Adenylate and Guanylate cyclase catalytic domain KQ251_08340 PF03461 TRCF domain KQ251_08340 PF02559 CarD-like/TRCF domain KQ251_08340 PF17757 UvrB interaction domain KQ251_08340 PF00271 Helicase conserved C-terminal domain KQ251_08340 PF00270 DEAD/DEAH box helicase KQ251_08360 PF03737 Aldolase/RraA KQ251_08365 PF13460 NAD(P)H-binding KQ251_08370 PF01649 Ribosomal protein S20 KQ251_08380 PF00459 Inositol monophosphatase family KQ251_08395 PF00005 ABC transporter KQ251_08395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ251_08400 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_08405 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_08410 PF01432 Peptidase family M3 KQ251_08430 PF07715 TonB-dependent Receptor Plug Domain KQ251_08430 PF00593 TonB dependent receptor KQ251_08440 PF01618 MotA/TolQ/ExbB proton channel family KQ251_08445 PF02472 Biopolymer transport protein ExbD/TolR KQ251_08450 PF02472 Biopolymer transport protein ExbD/TolR KQ251_08460 PF01274 Malate synthase KQ251_08465 PF03969 AFG1-like ATPase KQ251_08475 PF00743 Flavin-binding monooxygenase-like KQ251_08485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KQ251_08495 PF00216 Bacterial DNA-binding protein KQ251_08500 PF00575 S1 RNA binding domain KQ251_08505 PF02224 Cytidylate kinase KQ251_08515 PF14437 MafB19-like deaminase KQ251_08525 PF03167 Uracil DNA glycosylase superfamily KQ251_08535 PF03934 Type II secretion system (T2SS), protein K KQ251_08540 PF07963 Prokaryotic N-terminal methylation motif KQ251_08540 PF11612 Type II secretion system (T2SS), protein J KQ251_08545 PF02501 Type II secretion system (T2SS), protein I KQ251_08545 PF07963 Prokaryotic N-terminal methylation motif KQ251_08560 PF01026 TatD related DNase KQ251_08570 PF09115 DNA polymerase III, delta subunit, C terminal KQ251_08575 PF02348 Cytidylyltransferase KQ251_08580 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KQ251_08585 PF00005 ABC transporter KQ251_08585 PF00664 ABC transporter transmembrane region KQ251_08595 PF01618 MotA/TolQ/ExbB proton channel family KQ251_08600 PF02195 ParB-like nuclease domain KQ251_08600 PF17762 HTH domain found in ParB protein KQ251_08605 PF13614 AAA domain KQ251_08610 PF02527 rRNA small subunit methyltransferase G KQ251_08615 PF00483 Nucleotidyl transferase KQ251_08620 PF01636 Phosphotransferase enzyme family KQ251_08625 PF04453 LPS transport system D KQ251_08625 PF03968 OstA-like protein KQ251_08630 PF09312 SurA N-terminal domain KQ251_08630 PF00639 PPIC-type PPIASE domain KQ251_08635 PF01116 Fructose-bisphosphate aldolase class-II KQ251_08645 PF00162 Phosphoglycerate kinase KQ251_08655 PF02545 Maf-like protein KQ251_08660 PF08007 Cupin superfamily protein KQ251_08675 PF00375 Sodium:dicarboxylate symporter family KQ251_08680 PF06912 Protein of unknown function (DUF1275) KQ251_08685 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KQ251_08690 PF00005 ABC transporter KQ251_08690 PF00664 ABC transporter transmembrane region KQ251_08700 PF12833 Helix-turn-helix domain KQ251_08700 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ251_08705 PF01597 Glycine cleavage H-protein KQ251_08710 PF02146 Sir2 family KQ251_08715 PF00474 Sodium:solute symporter family KQ251_08720 PF01037 Lrp/AsnC ligand binding domain KQ251_08725 PF00171 Aldehyde dehydrogenase family KQ251_08725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KQ251_08725 PF14850 DNA-binding domain of Proline dehydrogenase KQ251_08725 PF01619 Proline dehydrogenase KQ251_08730 PF04229 GrpB protein KQ251_08735 PF05958 tRNA (Uracil-5-)-methyltransferase KQ251_08745 PF09992 Phosphodiester glycosidase KQ251_08755 PF04264 YceI-like domain KQ251_08765 PF02780 Transketolase, C-terminal domain KQ251_08765 PF00456 Transketolase, thiamine diphosphate binding domain KQ251_08765 PF02779 Transketolase, pyrimidine binding domain KQ251_08770 PF02773 S-adenosylmethionine synthetase, C-terminal domain KQ251_08770 PF02772 S-adenosylmethionine synthetase, central domain KQ251_08770 PF00438 S-adenosylmethionine synthetase, N-terminal domain KQ251_08790 PF00905 Penicillin binding protein transpeptidase domain KQ251_08805 PF02075 Crossover junction endodeoxyribonuclease RuvC KQ251_08810 PF01256 Carbohydrate kinase KQ251_08810 PF03853 YjeF-related protein N-terminus KQ251_08815 PF08331 Domain of unknown function (DUF1730) KQ251_08820 PF06968 Biotin and Thiamin Synthesis associated domain KQ251_08820 PF04055 Radical SAM superfamily KQ251_08835 PF16970 Type-1 fimbrial protein, A KQ251_08840 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ251_08840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ251_08845 PF13953 PapC C-terminal domain KQ251_08845 PF00577 Outer membrane usher protein KQ251_08845 PF13954 PapC N-terminal domain KQ251_08865 PF00892 EamA-like transporter family KQ251_08875 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ251_08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_08885 PF03466 LysR substrate binding domain KQ251_08905 PF00440 Bacterial regulatory proteins, tetR family KQ251_08915 PF01709 Transcriptional regulator KQ251_08920 PF01037 Lrp/AsnC ligand binding domain KQ251_08930 PF00005 ABC transporter KQ251_08935 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_08940 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_08955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_08955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_08965 PF00296 Luciferase-like monooxygenase KQ251_08970 PF03180 NLPA lipoprotein KQ251_08975 PF03180 NLPA lipoprotein KQ251_08980 PF00005 ABC transporter KQ251_08980 PF09383 NIL domain KQ251_08985 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_08990 PF01926 50S ribosome-binding GTPase KQ251_08990 PF06071 Protein of unknown function (DUF933) KQ251_09015 PF03591 AzlC protein KQ251_09020 PF05437 Branched-chain amino acid transport protein (AzlD) KQ251_09030 PF02222 ATP-grasp domain KQ251_09035 PF08335 GlnD PII-uridylyltransferase KQ251_09035 PF01966 HD domain KQ251_09035 PF01909 Nucleotidyltransferase domain KQ251_09040 PF00155 Aminotransferase class I and II KQ251_09050 PF12852 Cupin KQ251_09050 PF12833 Helix-turn-helix domain KQ251_09055 PF00255 Glutathione peroxidase KQ251_09060 PF01641 SelR domain KQ251_09065 PF00155 Aminotransferase class I and II KQ251_09070 PF00375 Sodium:dicarboxylate symporter family KQ251_09075 PF00665 Integrase core domain KQ251_09075 PF13936 Helix-turn-helix domain KQ251_09080 PF00710 Asparaginase, N-terminal KQ251_09080 PF17763 Glutaminase/Asparaginase C-terminal domain KQ251_09085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KQ251_09085 PF14579 Helix-hairpin-helix motif KQ251_09085 PF02811 PHP domain KQ251_09085 PF01336 OB-fold nucleic acid binding domain KQ251_09085 PF07733 Bacterial DNA polymerase III alpha NTPase domain KQ251_09090 PF00588 SpoU rRNA Methylase family KQ251_09095 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_09110 PF13192 Thioredoxin domain KQ251_09125 PF03466 LysR substrate binding domain KQ251_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09130 PF01758 Sodium Bile acid symporter family KQ251_09135 PF01022 Bacterial regulatory protein, arsR family KQ251_09140 PF03960 ArsC family KQ251_09150 PF13382 Adenine deaminase C-terminal domain KQ251_09150 PF01979 Amidohydrolase family KQ251_09160 PF03466 LysR substrate binding domain KQ251_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09170 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ251_09175 PF01177 Asp/Glu/Hydantoin racemase KQ251_09180 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KQ251_09185 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_09190 PF00005 ABC transporter KQ251_09195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ251_09205 PF00083 Sugar (and other) transporter KQ251_09210 PF00296 Luciferase-like monooxygenase KQ251_09225 PF01654 Cytochrome bd terminal oxidase subunit I KQ251_09230 PF02322 Cytochrome bd terminal oxidase subunit II KQ251_09240 PF00155 Aminotransferase class I and II KQ251_09240 PF00392 Bacterial regulatory proteins, gntR family KQ251_09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09245 PF03466 LysR substrate binding domain KQ251_09260 PF00698 Acyl transferase domain KQ251_09265 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KQ251_09275 PF01039 Carboxyl transferase domain KQ251_09280 PF06857 Malonate decarboxylase delta subunit (MdcD) KQ251_09285 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KQ251_09290 PF16957 Malonate decarboxylase, alpha subunit, transporter KQ251_09295 PF03466 LysR substrate binding domain KQ251_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09305 PF07690 Major Facilitator Superfamily KQ251_09320 PF00392 Bacterial regulatory proteins, gntR family KQ251_09320 PF00155 Aminotransferase class I and II KQ251_09325 PF04172 LrgB-like family KQ251_09330 PF03788 LrgA family KQ251_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09335 PF03466 LysR substrate binding domain KQ251_09340 PF14834 Glutathione S-transferase, C-terminal domain KQ251_09340 PF02798 Glutathione S-transferase, N-terminal domain KQ251_09345 PF02798 Glutathione S-transferase, N-terminal domain KQ251_09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09350 PF03466 LysR substrate binding domain KQ251_09360 PF00581 Rhodanese-like domain KQ251_09365 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_09375 PF00266 Aminotransferase class-V KQ251_09380 PF01810 LysE type translocator KQ251_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09385 PF03466 LysR substrate binding domain KQ251_09395 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_09400 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_09405 PF00005 ABC transporter KQ251_09410 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_09415 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_09430 PF00072 Response regulator receiver domain KQ251_09435 PF09308 LuxQ, periplasmic KQ251_09435 PF00072 Response regulator receiver domain KQ251_09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_09435 PF00512 His Kinase A (phospho-acceptor) domain KQ251_09445 PF01037 Lrp/AsnC ligand binding domain KQ251_09445 PF13404 AsnC-type helix-turn-helix domain KQ251_09455 PF00717 Peptidase S24-like KQ251_09480 PF00199 Catalase KQ251_09480 PF06628 Catalase-related immune-responsive KQ251_09480 PF18011 C-terminal domain found in long catalases KQ251_09490 PF02464 Competence-damaged protein KQ251_09490 PF18146 Damage-inducible protein CinA KH domain KQ251_09490 PF00994 Probable molybdopterin binding domain KQ251_09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09525 PF03466 LysR substrate binding domain KQ251_09545 PF00501 AMP-binding enzyme KQ251_09545 PF13193 AMP-binding enzyme C-terminal domain KQ251_09550 PF00440 Bacterial regulatory proteins, tetR family KQ251_09555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_09555 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_09555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_09560 PF01039 Carboxyl transferase domain KQ251_09565 PF00378 Enoyl-CoA hydratase/isomerase KQ251_09570 PF18140 Propionyl-coenzyme A carboxylase BT domain KQ251_09570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_09570 PF02785 Biotin carboxylase C-terminal domain KQ251_09570 PF00289 Biotin carboxylase, N-terminal domain KQ251_09570 PF00364 Biotin-requiring enzyme KQ251_09575 PF00682 HMGL-like KQ251_09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09580 PF03466 LysR substrate binding domain KQ251_09595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_09595 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_09595 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_09595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_09605 PF07690 Major Facilitator Superfamily KQ251_09615 PF01144 Coenzyme A transferase KQ251_09620 PF01144 Coenzyme A transferase KQ251_09625 PF07690 Major Facilitator Superfamily KQ251_09630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_09630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_09630 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_09635 PF00378 Enoyl-CoA hydratase/isomerase KQ251_09645 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ251_09645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_09645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_09650 PF02803 Thiolase, C-terminal domain KQ251_09650 PF00108 Thiolase, N-terminal domain KQ251_09655 PF09339 IclR helix-turn-helix domain KQ251_09665 PF01810 LysE type translocator KQ251_09670 PF16861 Carbamoyltransferase C-terminus KQ251_09670 PF02543 Carbamoyltransferase N-terminus KQ251_09680 PF03060 Nitronate monooxygenase KQ251_09685 PF00378 Enoyl-CoA hydratase/isomerase KQ251_09690 PF09339 IclR helix-turn-helix domain KQ251_09695 PF02515 CoA-transferase family III KQ251_09700 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_09700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_09700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_09705 PF07690 Major Facilitator Superfamily KQ251_09710 PF13419 Haloacid dehalogenase-like hydrolase KQ251_09715 PF00266 Aminotransferase class-V KQ251_09720 PF01266 FAD dependent oxidoreductase KQ251_09725 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_09730 PF00005 ABC transporter KQ251_09730 PF08402 TOBE domain KQ251_09740 PF00392 Bacterial regulatory proteins, gntR family KQ251_09740 PF07702 UTRA domain KQ251_09745 PF01494 FAD binding domain KQ251_09750 PF01614 Bacterial transcriptional regulator KQ251_09750 PF09339 IclR helix-turn-helix domain KQ251_09755 PF02525 Flavodoxin-like fold KQ251_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_09760 PF03466 LysR substrate binding domain KQ251_09765 PF02627 Carboxymuconolactone decarboxylase family KQ251_09770 PF00171 Aldehyde dehydrogenase family KQ251_09780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ251_09790 PF00171 Aldehyde dehydrogenase family KQ251_09795 PF00296 Luciferase-like monooxygenase KQ251_09800 PF01613 Flavin reductase like domain KQ251_09805 PF12697 Alpha/beta hydrolase family KQ251_09825 PF01292 Prokaryotic cytochrome b561 KQ251_09830 PF00199 Catalase KQ251_09860 PF00300 Histidine phosphatase superfamily (branch 1) KQ251_09870 PF03061 Thioesterase superfamily KQ251_09875 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_09880 PF07848 PaaX-like protein KQ251_09880 PF08223 PaaX-like protein C-terminal domain KQ251_09885 PF00501 AMP-binding enzyme KQ251_09885 PF14535 AMP-binding enzyme C-terminal domain KQ251_09890 PF02803 Thiolase, C-terminal domain KQ251_09890 PF00108 Thiolase, N-terminal domain KQ251_09895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_09895 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ251_09895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_09900 PF00378 Enoyl-CoA hydratase/isomerase KQ251_09905 PF00378 Enoyl-CoA hydratase/isomerase KQ251_09910 PF00175 Oxidoreductase NAD-binding domain KQ251_09910 PF00970 Oxidoreductase FAD-binding domain KQ251_09910 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_09915 PF01883 Iron-sulfur cluster assembly protein KQ251_09920 PF05138 Phenylacetic acid catabolic protein KQ251_09925 PF06243 Phenylacetic acid degradation B KQ251_09930 PF05138 Phenylacetic acid catabolic protein KQ251_09935 PF01575 MaoC like domain KQ251_09935 PF00171 Aldehyde dehydrogenase family KQ251_09940 PF03315 Serine dehydratase beta chain KQ251_09940 PF03313 Serine dehydratase alpha chain KQ251_09945 PF13520 Amino acid permease KQ251_09950 PF00171 Aldehyde dehydrogenase family KQ251_09955 PF00083 Sugar (and other) transporter KQ251_09965 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_09965 PF04324 BFD-like [2Fe-2S] binding domain KQ251_09975 PF01266 FAD dependent oxidoreductase KQ251_09980 PF05544 Proline racemase KQ251_09985 PF00392 Bacterial regulatory proteins, gntR family KQ251_09995 PF00701 Dihydrodipicolinate synthetase family KQ251_10005 PF09278 MerR, DNA binding KQ251_10005 PF00376 MerR family regulatory protein KQ251_10015 PF02677 Epoxyqueuosine reductase QueH KQ251_10030 PF07690 Major Facilitator Superfamily KQ251_10035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ251_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_10045 PF03466 LysR substrate binding domain KQ251_10065 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KQ251_10070 PF06812 ImpA, N-terminal, type VI secretion system KQ251_10075 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_10075 PF17871 AAA lid domain KQ251_10075 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_10075 PF07724 AAA domain (Cdc48 subfamily) KQ251_10085 PF00691 OmpA family KQ251_10085 PF01389 OmpA-like transmembrane domain KQ251_10095 PF00665 Integrase core domain KQ251_10095 PF13936 Helix-turn-helix domain KQ251_10120 PF05947 Type VI secretion system, TssF KQ251_10135 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KQ251_10160 PF00005 ABC transporter KQ251_10165 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_10170 PF01425 Amidase KQ251_10175 PF08753 NikR C terminal nickel binding domain KQ251_10175 PF01402 Ribbon-helix-helix protein, copG family KQ251_10190 PF01638 HxlR-like helix-turn-helix KQ251_10195 PF02525 Flavodoxin-like fold KQ251_10200 PF02785 Biotin carboxylase C-terminal domain KQ251_10200 PF00289 Biotin carboxylase, N-terminal domain KQ251_10200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_10215 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_10215 PF00107 Zinc-binding dehydrogenase KQ251_10215 PF13823 Alcohol dehydrogenase GroES-associated KQ251_10225 PF00440 Bacterial regulatory proteins, tetR family KQ251_10235 PF00654 Voltage gated chloride channel KQ251_10240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_10240 PF02785 Biotin carboxylase C-terminal domain KQ251_10240 PF00289 Biotin carboxylase, N-terminal domain KQ251_10240 PF00364 Biotin-requiring enzyme KQ251_10250 PF07286 Protein of unknown function (DUF1445) KQ251_10255 PF03746 LamB/YcsF family KQ251_10260 PF01566 Natural resistance-associated macrophage protein KQ251_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_10265 PF03466 LysR substrate binding domain KQ251_10300 PF13936 Helix-turn-helix domain KQ251_10300 PF00665 Integrase core domain KQ251_10315 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ251_10315 PF04717 Type VI secretion system, phage-baseplate injector KQ251_10315 PF13296 Putative type VI secretion system Rhs element Vgr KQ251_10340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_10340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_10370 PF00665 Integrase core domain KQ251_10370 PF13936 Helix-turn-helix domain KQ251_10385 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ251_10390 PF03707 Bacterial signalling protein N terminal repeat KQ251_10390 PF00563 EAL domain KQ251_10390 PF00990 Diguanylate cyclase, GGDEF domain KQ251_10395 PF00892 EamA-like transporter family KQ251_10400 PF01037 Lrp/AsnC ligand binding domain KQ251_10405 PF01624 MutS domain I KQ251_10405 PF05188 MutS domain II KQ251_10405 PF05192 MutS domain III KQ251_10405 PF05190 MutS family domain IV KQ251_10405 PF00488 MutS domain V KQ251_10415 PF00037 4Fe-4S binding domain KQ251_10415 PF11953 Domain of unknown function (DUF3470) KQ251_10425 PF01596 O-methyltransferase KQ251_10435 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_10440 PF01205 Uncharacterized protein family UPF0029 KQ251_10450 PF00664 ABC transporter transmembrane region KQ251_10450 PF00005 ABC transporter KQ251_10450 PF03412 Peptidase C39 family KQ251_10455 PF02321 Outer membrane efflux protein KQ251_10460 PF00005 ABC transporter KQ251_10460 PF12399 Branched-chain amino acid ATP-binding cassette transporter KQ251_10465 PF03968 OstA-like protein KQ251_10480 PF01380 SIS domain KQ251_10480 PF00571 CBS domain KQ251_10485 PF09190 DALR domain KQ251_10485 PF01406 tRNA synthetases class I (C) catalytic domain KQ251_10540 PF01638 HxlR-like helix-turn-helix KQ251_10545 PF07690 Major Facilitator Superfamily KQ251_10570 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ251_10570 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ251_10580 PF00313 'Cold-shock' DNA-binding domain KQ251_10585 PF01810 LysE type translocator KQ251_10615 PF13742 OB-fold nucleic acid binding domain KQ251_10615 PF02601 Exonuclease VII, large subunit KQ251_10650 PF00376 MerR family regulatory protein KQ251_10650 PF09278 MerR, DNA binding KQ251_10655 PF00403 Heavy-metal-associated domain KQ251_10660 PF00403 Heavy-metal-associated domain KQ251_10665 PF03466 LysR substrate binding domain KQ251_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_10670 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_10670 PF00355 Rieske [2Fe-2S] domain KQ251_10675 PF00866 Ring hydroxylating beta subunit KQ251_10680 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_10680 PF00970 Oxidoreductase FAD-binding domain KQ251_10680 PF00175 Oxidoreductase NAD-binding domain KQ251_10685 PF00106 short chain dehydrogenase KQ251_10690 PF03594 Benzoate membrane transport protein KQ251_10695 PF07690 Major Facilitator Superfamily KQ251_10705 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KQ251_10705 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KQ251_10710 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KQ251_10710 PF00271 Helicase conserved C-terminal domain KQ251_10710 PF00270 DEAD/DEAH box helicase KQ251_10710 PF11898 Domain of unknown function (DUF3418) KQ251_10710 PF04408 Helicase associated domain (HA2) KQ251_10715 PF00578 AhpC/TSA family KQ251_10715 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ251_10735 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_10735 PF13192 Thioredoxin domain KQ251_10745 PF00043 Glutathione S-transferase, C-terminal domain KQ251_10745 PF02798 Glutathione S-transferase, N-terminal domain KQ251_10755 PF02390 Putative methyltransferase KQ251_10760 PF13417 Glutathione S-transferase, N-terminal domain KQ251_10760 PF00043 Glutathione S-transferase, C-terminal domain KQ251_10770 PF00691 OmpA family KQ251_10770 PF13488 Glycine zipper KQ251_10775 PF01979 Amidohydrolase family KQ251_10780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ251_10780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ251_10790 PF02926 THUMP domain KQ251_10790 PF01170 Putative RNA methylase family UPF0020 KQ251_10790 PF10672 S-adenosylmethionine-dependent methyltransferase KQ251_10805 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_10805 PF07724 AAA domain (Cdc48 subfamily) KQ251_10805 PF17871 AAA lid domain KQ251_10805 PF02861 Clp amino terminal domain, pathogenicity island component KQ251_10805 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_10820 PF02566 OsmC-like protein KQ251_10830 PF00027 Cyclic nucleotide-binding domain KQ251_10830 PF13545 Crp-like helix-turn-helix domain KQ251_10835 PF00248 Aldo/keto reductase family KQ251_10850 PF00709 Adenylosuccinate synthetase KQ251_10855 PF13393 Histidyl-tRNA synthetase KQ251_10865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ251_10865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ251_10870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ251_10870 PF01411 tRNA synthetases class II (A) KQ251_10870 PF02272 DHHA1 domain KQ251_10875 PF01842 ACT domain KQ251_10875 PF13840 ACT domain KQ251_10875 PF00696 Amino acid kinase family KQ251_10880 PF02599 Global regulator protein family KQ251_10885 PF01351 Ribonuclease HII KQ251_10895 PF01292 Prokaryotic cytochrome b561 KQ251_10900 PF00962 Adenosine/AMP deaminase KQ251_10905 PF00860 Permease family KQ251_10915 PF00743 Flavin-binding monooxygenase-like KQ251_10920 PF00106 short chain dehydrogenase KQ251_10930 PF02678 Pirin KQ251_10930 PF17954 Quercetinase C-terminal cupin domain KQ251_10935 PF17932 Tetracyclin repressor-like, C-terminal domain KQ251_10935 PF00440 Bacterial regulatory proteins, tetR family KQ251_10945 PF00106 short chain dehydrogenase KQ251_10950 PF00743 Flavin-binding monooxygenase-like KQ251_10955 PF04072 Leucine carboxyl methyltransferase KQ251_10960 PF12833 Helix-turn-helix domain KQ251_10965 PF00743 Flavin-binding monooxygenase-like KQ251_10975 PF07859 alpha/beta hydrolase fold KQ251_10980 PF05199 GMC oxidoreductase KQ251_10985 PF03573 outer membrane porin, OprD family KQ251_10990 PF07690 Major Facilitator Superfamily KQ251_10995 PF00355 Rieske [2Fe-2S] domain KQ251_11000 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_11000 PF00175 Oxidoreductase NAD-binding domain KQ251_11015 PF07690 Major Facilitator Superfamily KQ251_11020 PF00378 Enoyl-CoA hydratase/isomerase KQ251_11025 PF00171 Aldehyde dehydrogenase family KQ251_11035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_11035 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_11035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_11040 PF03573 outer membrane porin, OprD family KQ251_11055 PF07519 Tannase and feruloyl esterase KQ251_11060 PF00392 Bacterial regulatory proteins, gntR family KQ251_11060 PF07729 FCD domain KQ251_11065 PF00171 Aldehyde dehydrogenase family KQ251_11070 PF00701 Dihydrodipicolinate synthetase family KQ251_11075 PF13378 Enolase C-terminal domain-like KQ251_11080 PF07690 Major Facilitator Superfamily KQ251_11085 PF08666 SAF domain KQ251_11085 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KQ251_11090 PF00892 EamA-like transporter family KQ251_11100 PF12833 Helix-turn-helix domain KQ251_11100 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ251_11105 PF00171 Aldehyde dehydrogenase family KQ251_11110 PF00324 Amino acid permease KQ251_11115 PF04958 Arginine N-succinyltransferase beta subunit KQ251_11120 PF00202 Aminotransferase class-III KQ251_11130 PF00171 Aldehyde dehydrogenase family KQ251_11140 PF07729 FCD domain KQ251_11140 PF00392 Bacterial regulatory proteins, gntR family KQ251_11150 PF00324 Amino acid permease KQ251_11155 PF01266 FAD dependent oxidoreductase KQ251_11160 PF00324 Amino acid permease KQ251_11170 PF05643 Putative bacterial lipoprotein (DUF799) KQ251_11180 PF03783 Curli production assembly/transport component CsgG KQ251_11230 PF05593 RHS Repeat KQ251_11230 PF03527 RHS protein KQ251_11235 PF04717 Type VI secretion system, phage-baseplate injector KQ251_11235 PF13296 Putative type VI secretion system Rhs element Vgr KQ251_11235 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ251_11245 PF03180 NLPA lipoprotein KQ251_11250 PF05987 Bacterial protein of unknown function (DUF898) KQ251_11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_11265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_11270 PF00764 Arginosuccinate synthase KQ251_11275 PF00990 Diguanylate cyclase, GGDEF domain KQ251_11275 PF01590 GAF domain KQ251_11275 PF00563 EAL domain KQ251_11275 PF00360 Phytochrome region KQ251_11280 PF01979 Amidohydrolase family KQ251_11285 PF00929 Exonuclease KQ251_11295 PF07715 TonB-dependent Receptor Plug Domain KQ251_11295 PF00593 TonB dependent receptor KQ251_11300 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_11300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_11305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ251_11305 PF00005 ABC transporter KQ251_11310 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_11310 PF12911 N-terminal TM domain of oligopeptide transport permease C KQ251_11315 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_11320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KQ251_11325 PF01464 Transglycosylase SLT domain KQ251_11325 PF01476 LysM domain KQ251_11325 PF01464 Transglycosylase SLT domain KQ251_11325 PF01476 LysM domain KQ251_11330 PF00929 Exonuclease KQ251_11340 PF00293 NUDIX domain KQ251_11340 PF09297 NADH pyrophosphatase zinc ribbon domain KQ251_11350 PF04972 BON domain KQ251_11355 PF02021 Uncharacterised protein family UPF0102 KQ251_11360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ251_11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_11370 PF03466 LysR substrate binding domain KQ251_11375 PF01810 LysE type translocator KQ251_11385 PF13411 MerR HTH family regulatory protein KQ251_11395 PF01494 FAD binding domain KQ251_11400 PF01494 FAD binding domain KQ251_11405 PF00557 Metallopeptidase family M24 KQ251_11405 PF05195 Aminopeptidase P, N-terminal domain KQ251_11515 PF03869 Arc-like DNA binding domain KQ251_11730 PF00145 C-5 cytosine-specific DNA methylase KQ251_11745 PF03796 DnaB-like helicase C terminal domain KQ251_11745 PF00772 DnaB-like helicase N terminal domain KQ251_11845 PF00117 Glutamine amidotransferase class-I KQ251_11850 PF11838 ERAP1-like C-terminal domain KQ251_11850 PF01433 Peptidase family M1 domain KQ251_11855 PF07715 TonB-dependent Receptor Plug Domain KQ251_11855 PF00593 TonB dependent receptor KQ251_11860 PF00591 Glycosyl transferase family, a/b domain KQ251_11860 PF02885 Glycosyl transferase family, helical bundle domain KQ251_11865 PF00218 Indole-3-glycerol phosphate synthase KQ251_11880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KQ251_11880 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KQ251_11885 PF01799 [2Fe-2S] binding domain KQ251_11885 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_11890 PF01227 GTP cyclohydrolase I KQ251_11900 PF00144 Beta-lactamase KQ251_11915 PF05675 Protein of unknown function (DUF817) KQ251_11920 PF01208 Uroporphyrinogen decarboxylase (URO-D) KQ251_11930 PF00425 chorismate binding enzyme KQ251_11940 PF00975 Thioesterase domain KQ251_11945 PF00005 ABC transporter KQ251_11950 PF00664 ABC transporter transmembrane region KQ251_11950 PF00005 ABC transporter KQ251_11955 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ251_11960 PF00857 Isochorismatase family KQ251_11960 PF00550 Phosphopantetheine attachment site KQ251_11965 PF13193 AMP-binding enzyme C-terminal domain KQ251_11965 PF00501 AMP-binding enzyme KQ251_11970 PF00501 AMP-binding enzyme KQ251_11970 PF00668 Condensation domain KQ251_11970 PF00550 Phosphopantetheine attachment site KQ251_11975 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ251_11980 PF07715 TonB-dependent Receptor Plug Domain KQ251_11980 PF00593 TonB dependent receptor KQ251_11985 PF01497 Periplasmic binding protein KQ251_11990 PF00005 ABC transporter KQ251_11995 PF01032 FecCD transport family KQ251_12000 PF01032 FecCD transport family KQ251_12005 PF00668 Condensation domain KQ251_12005 PF13193 AMP-binding enzyme C-terminal domain KQ251_12005 PF00501 AMP-binding enzyme KQ251_12005 PF00550 Phosphopantetheine attachment site KQ251_12005 PF00975 Thioesterase domain KQ251_12010 PF13193 AMP-binding enzyme C-terminal domain KQ251_12010 PF00501 AMP-binding enzyme KQ251_12010 PF00668 Condensation domain KQ251_12010 PF00550 Phosphopantetheine attachment site KQ251_12020 PF08348 YheO-like PAS domain KQ251_12020 PF13309 HTH domain KQ251_12025 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_12030 PF02678 Pirin KQ251_12030 PF17954 Quercetinase C-terminal cupin domain KQ251_12110 PF13356 Arm DNA-binding domain KQ251_12110 PF00589 Phage integrase family KQ251_12120 PF04328 Selenoprotein, putative KQ251_12125 PF02554 Carbon starvation protein CstA KQ251_12125 PF13722 5TM C-terminal transporter carbon starvation CstA KQ251_12130 PF09285 Elongation factor P, C-terminal KQ251_12130 PF01132 Elongation factor P (EF-P) OB domain KQ251_12130 PF08207 Elongation factor P (EF-P) KOW-like domain KQ251_12135 PF04055 Radical SAM superfamily KQ251_12145 PF12792 CSS motif domain associated with EAL KQ251_12145 PF00563 EAL domain KQ251_12150 PF01197 Ribosomal protein L31 KQ251_12155 PF13593 SBF-like CPA transporter family (DUF4137) KQ251_12160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_12165 PF07690 Major Facilitator Superfamily KQ251_12170 PF13654 AAA domain KQ251_12170 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ251_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_12175 PF03466 LysR substrate binding domain KQ251_12180 PF01476 LysM domain KQ251_12180 PF01551 Peptidase family M23 KQ251_12185 PF01975 Survival protein SurE KQ251_12200 PF07943 Penicillin-binding protein 5, C-terminal domain KQ251_12200 PF00768 D-alanyl-D-alanine carboxypeptidase KQ251_12205 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_12210 PF00293 NUDIX domain KQ251_12210 PF13344 Haloacid dehalogenase-like hydrolase KQ251_12220 PF04356 Protein of unknown function (DUF489) KQ251_12225 PF08328 Adenylosuccinate lyase C-terminal KQ251_12225 PF00206 Lyase KQ251_12240 PF08496 Peptidase family S49 N-terminal KQ251_12240 PF01343 Peptidase family S49 KQ251_12245 PF00005 ABC transporter KQ251_12250 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_12255 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_12260 PF12849 PBP superfamily domain KQ251_12265 PF00324 Amino acid permease KQ251_12270 PF00205 Thiamine pyrophosphate enzyme, central domain KQ251_12270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ251_12270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ251_12275 PF01037 Lrp/AsnC ligand binding domain KQ251_12280 PF00171 Aldehyde dehydrogenase family KQ251_12285 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ251_12290 PF00202 Aminotransferase class-III KQ251_12300 PF00440 Bacterial regulatory proteins, tetR family KQ251_12300 PF17754 MftR C-terminal domain KQ251_12310 PF00487 Fatty acid desaturase KQ251_12315 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_12315 PF00175 Oxidoreductase NAD-binding domain KQ251_12315 PF00970 Oxidoreductase FAD-binding domain KQ251_12320 PF00440 Bacterial regulatory proteins, tetR family KQ251_12330 PF18337 RapA N-terminal Tudor like domain KQ251_12330 PF18339 RapA N-terminal Tudor like domain 1 KQ251_12330 PF00176 SNF2 family N-terminal domain KQ251_12330 PF12137 RNA polymerase recycling family C-terminal KQ251_12330 PF00271 Helicase conserved C-terminal domain KQ251_12335 PF00849 RNA pseudouridylate synthase KQ251_12345 PF00202 Aminotransferase class-III KQ251_12350 PF02581 Thiamine monophosphate synthase KQ251_12375 PF00675 Insulinase (Peptidase family M16) KQ251_12375 PF05193 Peptidase M16 inactive domain KQ251_12380 PF02567 Phenazine biosynthesis-like protein KQ251_12385 PF00375 Sodium:dicarboxylate symporter family KQ251_12390 PF03466 LysR substrate binding domain KQ251_12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_12395 PF06779 Uncharacterised MFS-type transporter YbfB KQ251_12415 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ251_12420 PF00849 RNA pseudouridylate synthase KQ251_12425 PF03971 Monomeric isocitrate dehydrogenase KQ251_12435 PF07943 Penicillin-binding protein 5, C-terminal domain KQ251_12435 PF00768 D-alanyl-D-alanine carboxypeptidase KQ251_12440 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_12445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_12450 PF00875 DNA photolyase KQ251_12450 PF03441 FAD binding domain of DNA photolyase KQ251_12480 PF02350 UDP-N-acetylglucosamine 2-epimerase KQ251_12495 PF03060 Nitronate monooxygenase KQ251_12500 PF01207 Dihydrouridine synthase (Dus) KQ251_12505 PF07759 Protein of unknown function (DUF1615) KQ251_12515 PF00696 Amino acid kinase family KQ251_12515 PF01472 PUA domain KQ251_12520 PF01926 50S ribosome-binding GTPase KQ251_12520 PF01018 GTP1/OBG KQ251_12535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ251_12535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ251_12540 PF00892 EamA-like transporter family KQ251_12550 PF17757 UvrB interaction domain KQ251_12550 PF02151 UvrB/uvrC motif KQ251_12550 PF04851 Type III restriction enzyme, res subunit KQ251_12550 PF00271 Helicase conserved C-terminal domain KQ251_12550 PF12344 Ultra-violet resistance protein B KQ251_12560 PF00990 Diguanylate cyclase, GGDEF domain KQ251_12560 PF17151 Periplasmic sensor domain KQ251_12570 PF00155 Aminotransferase class I and II KQ251_12600 PF00106 short chain dehydrogenase KQ251_12605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KQ251_12610 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KQ251_12615 PF11967 Recombination protein O N terminal KQ251_12615 PF02565 Recombination protein O C terminal KQ251_12625 PF07650 KH domain KQ251_12625 PF01926 50S ribosome-binding GTPase KQ251_12630 PF00035 Double-stranded RNA binding motif KQ251_12630 PF14622 Ribonuclease-III-like KQ251_12640 PF10502 Signal peptidase, peptidase S26 KQ251_12645 PF06421 GTP-binding protein LepA C-terminus KQ251_12645 PF03144 Elongation factor Tu domain 2 KQ251_12645 PF00009 Elongation factor Tu GTP binding domain KQ251_12645 PF00679 Elongation factor G C-terminus KQ251_12650 PF13302 Acetyltransferase (GNAT) domain KQ251_12660 PF13180 PDZ domain KQ251_12665 PF02910 Fumarate reductase flavoprotein C-term KQ251_12665 PF00890 FAD binding domain KQ251_12675 PF02223 Thymidylate kinase KQ251_12680 PF02618 YceG-like family KQ251_12685 PF01063 Amino-transferase class IV KQ251_12700 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_12705 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_12710 PF00005 ABC transporter KQ251_12710 PF12857 TOBE-like domain KQ251_12715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_12715 PF03466 LysR substrate binding domain KQ251_12725 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_12725 PF14602 Hexapeptide repeat of succinyl-transferase KQ251_12725 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KQ251_12735 PF06508 Queuosine biosynthesis protein QueC KQ251_12750 PF00578 AhpC/TSA family KQ251_12760 PF01467 Cytidylyltransferase-like KQ251_12760 PF00293 NUDIX domain KQ251_12765 PF00378 Enoyl-CoA hydratase/isomerase KQ251_12770 PF01784 NIF3 (NGG1p interacting factor 3) KQ251_12775 PF07690 Major Facilitator Superfamily KQ251_12780 PF02769 AIR synthase related protein, C-terminal domain KQ251_12780 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KQ251_12780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KQ251_12785 PF01966 HD domain KQ251_12790 PF01330 RuvA N terminal domain KQ251_12790 PF07499 RuvA, C-terminal domain KQ251_12795 PF17864 RuvB AAA lid domain KQ251_12795 PF05491 RuvB C-terminal winged helix domain KQ251_12795 PF05496 Holliday junction DNA helicase RuvB P-loop domain KQ251_12800 PF07687 Peptidase dimerisation domain KQ251_12800 PF01546 Peptidase family M20/M25/M40 KQ251_12805 PF03061 Thioesterase superfamily KQ251_12810 PF01618 MotA/TolQ/ExbB proton channel family KQ251_12815 PF02472 Biopolymer transport protein ExbD/TolR KQ251_12825 PF07676 WD40-like Beta Propeller Repeat KQ251_12825 PF04052 TolB amino-terminal domain KQ251_12830 PF00691 OmpA family KQ251_12840 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KQ251_12845 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ251_12845 PF00588 SpoU rRNA Methylase family KQ251_12875 PF00308 Bacterial dnaA protein KQ251_12875 PF08299 Bacterial dnaA protein helix-turn-helix KQ251_12875 PF11638 DnaA N-terminal domain KQ251_12880 PF01594 AI-2E family transporter KQ251_12885 PF00586 AIR synthase related protein, N-terminal domain KQ251_12885 PF02769 AIR synthase related protein, C-terminal domain KQ251_12890 PF00551 Formyl transferase KQ251_12895 PF12697 Alpha/beta hydrolase family KQ251_12900 PF01343 Peptidase family S49 KQ251_12900 PF06965 Na+/H+ antiporter 1 KQ251_12915 PF00005 ABC transporter KQ251_12920 PF02687 FtsX-like permease family KQ251_12920 PF12704 MacB-like periplasmic core domain KQ251_12930 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KQ251_12945 PF00266 Aminotransferase class-V KQ251_12955 PF13533 Biotin-lipoyl like KQ251_12975 PF00535 Glycosyl transferase family 2 KQ251_12990 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ251_12990 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ251_12995 PF01012 Electron transfer flavoprotein domain KQ251_12995 PF00766 Electron transfer flavoprotein FAD-binding domain KQ251_13000 PF01012 Electron transfer flavoprotein domain KQ251_13005 PF00589 Phage integrase family KQ251_13005 PF02899 Phage integrase, N-terminal SAM-like domain KQ251_13010 PF01810 LysE type translocator KQ251_13015 PF01678 Diaminopimelate epimerase KQ251_13020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KQ251_13020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KQ251_13030 PF00324 Amino acid permease KQ251_13035 PF18073 Rubredoxin metal binding domain KQ251_13045 PF00152 tRNA synthetases class II (D, K and N) KQ251_13050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ251_13050 PF11890 Domain of unknown function (DUF3410) KQ251_13050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ251_13055 PF06803 Protein of unknown function (DUF1232) KQ251_13060 PF02634 FdhD/NarQ family KQ251_13065 PF00384 Molybdopterin oxidoreductase KQ251_13070 PF02595 Glycerate kinase family KQ251_13090 PF13936 Helix-turn-helix domain KQ251_13090 PF00665 Integrase core domain KQ251_13115 PF09857 Putative toxin of bacterial toxin-antitoxin pair KQ251_13125 PF00550 Phosphopantetheine attachment site KQ251_13125 PF00975 Thioesterase domain KQ251_13125 PF00501 AMP-binding enzyme KQ251_13125 PF00668 Condensation domain KQ251_13125 PF13193 AMP-binding enzyme C-terminal domain KQ251_13140 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ251_13140 PF03449 Transcription elongation factor, N-terminal KQ251_13145 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_13145 PF01464 Transglycosylase SLT domain KQ251_13155 PF01171 PP-loop family KQ251_13160 PF01464 Transglycosylase SLT domain KQ251_13165 PF01435 Peptidase family M48 KQ251_13175 PF00873 AcrB/AcrD/AcrF family KQ251_13180 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ251_13185 PF00753 Metallo-beta-lactamase superfamily KQ251_13190 PF01219 Prokaryotic diacylglycerol kinase KQ251_13210 PF01757 Acyltransferase family KQ251_13210 PF00842 Alanine racemase, C-terminal domain KQ251_13210 PF01168 Alanine racemase, N-terminal domain KQ251_13225 PF00118 TCP-1/cpn60 chaperonin family KQ251_13230 PF00166 Chaperonin 10 Kd subunit KQ251_13240 PF00149 Calcineurin-like phosphoesterase KQ251_13245 PF00781 Diacylglycerol kinase catalytic domain KQ251_13250 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KQ251_13250 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KQ251_13255 PF01266 FAD dependent oxidoreductase KQ251_13255 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KQ251_13260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KQ251_13260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KQ251_13265 PF00083 Sugar (and other) transporter KQ251_13280 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KQ251_13280 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KQ251_13295 PF16655 PhoD-like phosphatase, N-terminal domain KQ251_13295 PF09423 PhoD-like phosphatase KQ251_13315 PF00809 Pterin binding enzyme KQ251_13320 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_13320 PF17862 AAA+ lid domain KQ251_13320 PF06480 FtsH Extracellular KQ251_13320 PF01434 Peptidase family M41 KQ251_13325 PF01728 FtsJ-like methyltransferase KQ251_13330 PF01985 CRS1 / YhbY (CRM) domain KQ251_13345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KQ251_13345 PF00117 Glutamine amidotransferase class-I KQ251_13350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_13350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KQ251_13350 PF02142 MGS-like domain KQ251_13355 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ251_13355 PF03449 Transcription elongation factor, N-terminal KQ251_13360 PF00440 Bacterial regulatory proteins, tetR family KQ251_13365 PF01042 Endoribonuclease L-PSP KQ251_13370 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_13375 PF00582 Universal stress protein family KQ251_13380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ251_13390 PF09587 Bacterial capsule synthesis protein PGA_cap KQ251_13420 PF00999 Sodium/hydrogen exchanger family KQ251_13425 PF04228 Putative neutral zinc metallopeptidase KQ251_13430 PF05661 Protein of unknown function (DUF808) KQ251_13435 PF00579 tRNA synthetases class I (W and Y) KQ251_13440 PF02629 CoA binding domain KQ251_13440 PF00549 CoA-ligase KQ251_13445 PF08442 ATP-grasp domain KQ251_13445 PF00549 CoA-ligase KQ251_13450 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_13450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_13455 PF00364 Biotin-requiring enzyme KQ251_13455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ251_13455 PF02817 e3 binding domain KQ251_13460 PF16078 2-oxoglutarate dehydrogenase N-terminus KQ251_13460 PF00676 Dehydrogenase E1 component KQ251_13460 PF16870 2-oxoglutarate dehydrogenase C-terminal KQ251_13460 PF02779 Transketolase, pyrimidine binding domain KQ251_13475 PF13085 2Fe-2S iron-sulfur cluster binding domain KQ251_13480 PF00890 FAD binding domain KQ251_13480 PF02910 Fumarate reductase flavoprotein C-term KQ251_13485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ251_13490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ251_13495 PF00285 Citrate synthase, C-terminal domain KQ251_13505 PF00581 Rhodanese-like domain KQ251_13505 PF17773 UPF0176 acylphosphatase like domain KQ251_13520 PF04545 Sigma-70, region 4 KQ251_13520 PF04539 Sigma-70 region 3 KQ251_13520 PF04542 Sigma-70 region 2 KQ251_13520 PF03979 Sigma-70 factor, region 1.1 KQ251_13520 PF04546 Sigma-70, non-essential region KQ251_13520 PF00140 Sigma-70 factor, region 1.2 KQ251_13525 PF04359 Protein of unknown function (DUF493) KQ251_13530 PF03099 Biotin/lipoate A/B protein ligase family KQ251_13540 PF00465 Iron-containing alcohol dehydrogenase KQ251_13545 PF13520 Amino acid permease KQ251_13550 PF03358 NADPH-dependent FMN reductase KQ251_13555 PF01638 HxlR-like helix-turn-helix KQ251_13560 PF00588 SpoU rRNA Methylase family KQ251_13565 PF10414 Sirohaem synthase dimerisation region KQ251_13565 PF14824 Sirohaem biosynthesis protein central KQ251_13565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ251_13570 PF02403 Seryl-tRNA synthetase N-terminal domain KQ251_13570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ251_13580 PF03548 Outer membrane lipoprotein carrier protein LolA KQ251_13585 PF01016 Ribosomal L27 protein KQ251_13590 PF00829 Ribosomal prokaryotic L21 protein KQ251_13600 PF00348 Polyprenyl synthetase KQ251_13610 PF01569 PAP2 superfamily KQ251_13615 PF00529 HlyD membrane-fusion protein of T1SS KQ251_13615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_13620 PF00873 AcrB/AcrD/AcrF family KQ251_13625 PF02321 Outer membrane efflux protein KQ251_13630 PF01906 Putative heavy-metal-binding KQ251_13635 PF01906 Putative heavy-metal-binding KQ251_13655 PF10458 Valyl tRNA synthetase tRNA binding arm KQ251_13655 PF08264 Anticodon-binding domain of tRNA KQ251_13655 PF00133 tRNA synthetases class I (I, L, M and V) KQ251_13675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_13675 PF03466 LysR substrate binding domain KQ251_13680 PF00909 Ammonium Transporter Family KQ251_13690 PF08521 Two-component sensor kinase N-terminal KQ251_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_13690 PF00512 His Kinase A (phospho-acceptor) domain KQ251_13695 PF00072 Response regulator receiver domain KQ251_13695 PF00486 Transcriptional regulatory protein, C terminal KQ251_13700 PF08019 Phosphoethanolamine transferase EptA/EptB KQ251_13700 PF00884 Sulfatase KQ251_13720 PF01734 Patatin-like phospholipase KQ251_13730 PF01145 SPFH domain / Band 7 family KQ251_13735 PF04237 YjbR KQ251_13740 PF00348 Polyprenyl synthetase KQ251_13745 PF04303 PrpF protein KQ251_13750 PF00324 Amino acid permease KQ251_13760 PF01965 DJ-1/PfpI family KQ251_13765 PF14765 Polyketide synthase dehydratase KQ251_13765 PF00550 Phosphopantetheine attachment site KQ251_13765 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_13765 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_13765 PF08659 KR domain KQ251_13765 PF16197 Ketoacyl-synthetase C-terminal extension KQ251_13765 PF08990 Erythronolide synthase docking KQ251_13765 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_13765 PF00698 Acyl transferase domain KQ251_13765 PF09277 Erythronolide synthase, docking KQ251_13770 PF12833 Helix-turn-helix domain KQ251_13770 PF06719 AraC-type transcriptional regulator N-terminus KQ251_13775 PF02673 Bacitracin resistance protein BacA KQ251_13795 PF02525 Flavodoxin-like fold KQ251_13810 PF01507 Phosphoadenosine phosphosulfate reductase family KQ251_13815 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KQ251_13815 PF06974 Protein of unknown function (DUF1298) KQ251_13825 PF10150 Ribonuclease E/G family KQ251_13825 PF00575 S1 RNA binding domain KQ251_13830 PF02545 Maf-like protein KQ251_13835 PF04093 rod shape-determining protein MreD KQ251_13840 PF04085 rod shape-determining protein MreC KQ251_13850 PF02686 Glu-tRNAGln amidotransferase C subunit KQ251_13855 PF01425 Amidase KQ251_13860 PF02637 GatB domain KQ251_13860 PF02934 GatB/GatE catalytic domain KQ251_13885 PF05992 SbmA/BacA-like family KQ251_13890 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_13890 PF13291 ACT domain KQ251_13895 PF01734 Patatin-like phospholipase KQ251_13900 PF01235 Sodium:alanine symporter family KQ251_13915 PF00881 Nitroreductase family KQ251_13920 PF07690 Major Facilitator Superfamily KQ251_13925 PF12805 FUSC-like inner membrane protein yccS KQ251_13935 PF00175 Oxidoreductase NAD-binding domain KQ251_13935 PF00258 Flavodoxin KQ251_13935 PF00667 FAD binding domain KQ251_13975 PF03734 L,D-transpeptidase catalytic domain KQ251_13975 PF17969 L,D-transpeptidase C-terminal domain KQ251_13980 PF04304 Protein of unknown function (DUF454) KQ251_13990 PF08085 Entericidin EcnA/B family KQ251_13995 PF07687 Peptidase dimerisation domain KQ251_13995 PF01546 Peptidase family M20/M25/M40 KQ251_14005 PF01584 CheW-like domain KQ251_14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_14005 PF01627 Hpt domain KQ251_14005 PF00072 Response regulator receiver domain KQ251_14010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KQ251_14010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KQ251_14015 PF01584 CheW-like domain KQ251_14020 PF00072 Response regulator receiver domain KQ251_14025 PF00072 Response regulator receiver domain KQ251_14040 PF00873 AcrB/AcrD/AcrF family KQ251_14045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ251_14045 PF04073 Aminoacyl-tRNA editing domain KQ251_14045 PF03129 Anticodon binding domain KQ251_14050 PF07411 Domain of unknown function (DUF1508) KQ251_14055 PF03831 PhnA domain KQ251_14055 PF08274 PhnA Zinc-Ribbon KQ251_14060 PF04343 Protein of unknown function, DUF488 KQ251_14070 PF01571 Aminomethyltransferase folate-binding domain KQ251_14075 PF13098 Thioredoxin-like domain KQ251_14075 PF10411 Disulfide bond isomerase protein N-terminus KQ251_14085 PF03547 Membrane transport protein KQ251_14090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_14095 PF07715 TonB-dependent Receptor Plug Domain KQ251_14095 PF00593 TonB dependent receptor KQ251_14100 PF02245 Methylpurine-DNA glycosylase (MPG) KQ251_14105 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KQ251_14105 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KQ251_14105 PF06827 Zinc finger found in FPG and IleRS KQ251_14120 PF01741 Large-conductance mechanosensitive channel, MscL KQ251_14125 PF00009 Elongation factor Tu GTP binding domain KQ251_14125 PF03144 Elongation factor Tu domain 2 KQ251_14125 PF00679 Elongation factor G C-terminus KQ251_14130 PF00860 Permease family KQ251_14135 PF05175 Methyltransferase small domain KQ251_14135 PF08468 Methyltransferase small domain N-terminal KQ251_14140 PF00324 Amino acid permease KQ251_14145 PF01139 tRNA-splicing ligase RtcB KQ251_14155 PF00691 OmpA family KQ251_14155 PF13505 Outer membrane protein beta-barrel domain KQ251_14165 PF02803 Thiolase, C-terminal domain KQ251_14165 PF00108 Thiolase, N-terminal domain KQ251_14175 PF00893 Small Multidrug Resistance protein KQ251_14185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ251_14185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ251_14190 PF01011 PQQ enzyme repeat KQ251_14195 PF04966 Carbohydrate-selective porin, OprB family KQ251_14200 PF02515 CoA-transferase family III KQ251_14205 PF12833 Helix-turn-helix domain KQ251_14205 PF02311 AraC-like ligand binding domain KQ251_14210 PF02803 Thiolase, C-terminal domain KQ251_14210 PF00108 Thiolase, N-terminal domain KQ251_14215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_14215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_14215 PF00378 Enoyl-CoA hydratase/isomerase KQ251_14240 PF03006 Haemolysin-III related KQ251_14245 PF00083 Sugar (and other) transporter KQ251_14245 PF07690 Major Facilitator Superfamily KQ251_14255 PF01043 SecA preprotein cross-linking domain KQ251_14255 PF07516 SecA Wing and Scaffold domain KQ251_14255 PF07517 SecA DEAD-like domain KQ251_14255 PF02810 SEC-C motif KQ251_14260 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ251_14260 PF00578 AhpC/TSA family KQ251_14265 PF00753 Metallo-beta-lactamase superfamily KQ251_14280 PF02875 Mur ligase family, glutamate ligase domain KQ251_14280 PF08245 Mur ligase middle domain KQ251_14285 PF01039 Carboxyl transferase domain KQ251_14290 PF00290 Tryptophan synthase alpha chain KQ251_14315 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_14320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KQ251_14325 PF07715 TonB-dependent Receptor Plug Domain KQ251_14325 PF00593 TonB dependent receptor KQ251_14330 PF01923 Cobalamin adenosyltransferase KQ251_14335 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ251_14350 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KQ251_14355 PF00486 Transcriptional regulatory protein, C terminal KQ251_14355 PF00072 Response regulator receiver domain KQ251_14360 PF00512 His Kinase A (phospho-acceptor) domain KQ251_14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_14360 PF00672 HAMP domain KQ251_14370 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_14370 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_14370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_14370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_14375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_14375 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_14375 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_14375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_14380 PF06146 Phosphate-starvation-inducible E KQ251_14400 PF07715 TonB-dependent Receptor Plug Domain KQ251_14400 PF00593 TonB dependent receptor KQ251_14410 PF02938 GAD domain KQ251_14410 PF00152 tRNA synthetases class II (D, K and N) KQ251_14410 PF01336 OB-fold nucleic acid binding domain KQ251_14415 PF17101 Stealth protein CR1, conserved region 1 KQ251_14415 PF11380 Stealth protein CR2, conserved region 2 KQ251_14415 PF17102 Stealth protein CR3, conserved region 3 KQ251_14440 PF00534 Glycosyl transferases group 1 KQ251_14440 PF13439 Glycosyltransferase Family 4 KQ251_14445 PF00535 Glycosyl transferase family 2 KQ251_14450 PF01522 Polysaccharide deacetylase KQ251_14465 PF01063 Amino-transferase class IV KQ251_14470 PF03710 Glutamate-ammonia ligase adenylyltransferase KQ251_14470 PF08335 GlnD PII-uridylyltransferase KQ251_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_14475 PF00512 His Kinase A (phospho-acceptor) domain KQ251_14475 PF07689 KaiB domain KQ251_14545 PF01510 N-acetylmuramoyl-L-alanine amidase KQ251_14545 PF01471 Putative peptidoglycan binding domain KQ251_14640 PF13438 Domain of unknown function (DUF4113) KQ251_14640 PF00817 impB/mucB/samB family KQ251_14640 PF11799 impB/mucB/samB family C-terminal domain KQ251_14640 PF11798 IMS family HHH motif KQ251_14645 PF00717 Peptidase S24-like KQ251_14660 PF13737 Transposase DDE domain KQ251_14720 PF02547 Queuosine biosynthesis protein KQ251_14735 PF01702 Queuine tRNA-ribosyltransferase KQ251_14740 PF02699 Preprotein translocase subunit KQ251_14745 PF07549 SecD/SecF GG Motif KQ251_14745 PF13721 SecD export protein N-terminal TM region KQ251_14745 PF02355 Protein export membrane protein KQ251_14750 PF07549 SecD/SecF GG Motif KQ251_14750 PF02355 Protein export membrane protein KQ251_14755 PF04127 DNA / pantothenate metabolism flavoprotein KQ251_14755 PF02441 Flavoprotein KQ251_14760 PF04002 RadC-like JAB domain KQ251_14765 PF01062 Bestrophin, RFP-TM, chloride channel KQ251_14770 PF02811 PHP domain KQ251_14775 PF04279 Intracellular septation protein A KQ251_14780 PF03795 YCII-related domain KQ251_14790 PF01266 FAD dependent oxidoreductase KQ251_14790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KQ251_14800 PF04461 Protein of unknown function (DUF520) KQ251_14810 PF03061 Thioesterase superfamily KQ251_14815 PF00085 Thioredoxin KQ251_14820 PF00561 alpha/beta hydrolase fold KQ251_14825 PF00753 Metallo-beta-lactamase superfamily KQ251_14825 PF04273 Putative phosphatase (DUF442) KQ251_14835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_14835 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_14870 PF00990 Diguanylate cyclase, GGDEF domain KQ251_14870 PF17152 Periplasmic sensor domain KQ251_14875 PF00691 OmpA family KQ251_14875 PF01389 OmpA-like transmembrane domain KQ251_14880 PF00149 Calcineurin-like phosphoesterase KQ251_14880 PF10518 TAT (twin-arginine translocation) pathway signal sequence KQ251_14885 PF13091 PLD-like domain KQ251_14895 PF13167 GTP-binding GTPase N-terminal KQ251_14895 PF16360 GTP-binding GTPase Middle Region KQ251_14895 PF01926 50S ribosome-binding GTPase KQ251_14915 PF00149 Calcineurin-like phosphoesterase KQ251_14920 PF00398 Ribosomal RNA adenine dimethylase KQ251_14925 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KQ251_14930 PF00572 Ribosomal protein L13 KQ251_14935 PF00380 Ribosomal protein S9/S16 KQ251_14940 PF13417 Glutathione S-transferase, N-terminal domain KQ251_14940 PF00043 Glutathione S-transferase, C-terminal domain KQ251_14945 PF04386 Stringent starvation protein B KQ251_14955 PF00289 Biotin carboxylase, N-terminal domain KQ251_14955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_14955 PF02785 Biotin carboxylase C-terminal domain KQ251_14955 PF00364 Biotin-requiring enzyme KQ251_14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_14965 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_14965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_14975 PF13737 Transposase DDE domain KQ251_14995 PF00440 Bacterial regulatory proteins, tetR family KQ251_14995 PF17932 Tetracyclin repressor-like, C-terminal domain KQ251_15000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_15000 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_15000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_15045 PF01066 CDP-alcohol phosphatidyltransferase KQ251_15050 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KQ251_15070 PF00056 lactate/malate dehydrogenase, NAD binding domain KQ251_15070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KQ251_15080 PF01464 Transglycosylase SLT domain KQ251_15080 PF10145 Phage-related minor tail protein KQ251_15080 PF01551 Peptidase family M23 KQ251_15085 PF00919 Uncharacterized protein family UPF0004 KQ251_15085 PF01938 TRAM domain KQ251_15085 PF04055 Radical SAM superfamily KQ251_15090 PF02562 PhoH-like protein KQ251_15095 PF02130 Uncharacterized protein family UPF0054 KQ251_15120 PF03358 NADPH-dependent FMN reductase KQ251_15125 PF03631 Virulence factor BrkB KQ251_15130 PF00892 EamA-like transporter family KQ251_15135 PF12833 Helix-turn-helix domain KQ251_15140 PF01557 Fumarylacetoacetate (FAA) hydrolase family KQ251_15185 PF00575 S1 RNA binding domain KQ251_15185 PF08206 Ribonuclease B OB domain KQ251_15185 PF00773 RNB domain KQ251_15185 PF17876 Cold shock domain KQ251_15185 PF08461 Ribonuclease R winged-helix domain KQ251_15190 PF01432 Peptidase family M3 KQ251_15195 PF09526 Probable metal-binding protein (DUF2387) KQ251_15225 PF03937 Flavinator of succinate dehydrogenase KQ251_15230 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_15230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_15230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_15235 PF00743 Flavin-binding monooxygenase-like KQ251_15240 PF01196 Ribosomal protein L17 KQ251_15245 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KQ251_15245 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KQ251_15245 PF01000 RNA polymerase Rpb3/RpoA insert domain KQ251_15250 PF01479 S4 domain KQ251_15250 PF00163 Ribosomal protein S4/S9 N-terminal domain KQ251_15255 PF00411 Ribosomal protein S11 KQ251_15260 PF00416 Ribosomal protein S13/S18 KQ251_15265 PF00444 Ribosomal protein L36 KQ251_15270 PF00344 SecY translocase KQ251_15275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KQ251_15280 PF00327 Ribosomal protein L30p/L7e KQ251_15285 PF00333 Ribosomal protein S5, N-terminal domain KQ251_15285 PF03719 Ribosomal protein S5, C-terminal domain KQ251_15290 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KQ251_15295 PF00347 Ribosomal protein L6 KQ251_15300 PF00410 Ribosomal protein S8 KQ251_15305 PF00253 Ribosomal protein S14p/S29e KQ251_15310 PF00673 ribosomal L5P family C-terminus KQ251_15310 PF00281 Ribosomal protein L5 KQ251_15315 PF00467 KOW motif KQ251_15315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KQ251_15320 PF00238 Ribosomal protein L14p/L23e KQ251_15325 PF00366 Ribosomal protein S17 KQ251_15330 PF00831 Ribosomal L29 protein KQ251_15335 PF00252 Ribosomal protein L16p/L10e KQ251_15340 PF07650 KH domain KQ251_15340 PF00189 Ribosomal protein S3, C-terminal domain KQ251_15345 PF00237 Ribosomal protein L22p/L17e KQ251_15350 PF00203 Ribosomal protein S19 KQ251_15355 PF00181 Ribosomal Proteins L2, RNA binding domain KQ251_15355 PF03947 Ribosomal Proteins L2, C-terminal domain KQ251_15360 PF00276 Ribosomal protein L23 KQ251_15365 PF00573 Ribosomal protein L4/L1 family KQ251_15370 PF00297 Ribosomal protein L3 KQ251_15375 PF00338 Ribosomal protein S10p/S20e KQ251_15380 PF00117 Glutamine amidotransferase class-I KQ251_15385 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ251_15390 PF05872 Bacterial protein of unknown function (DUF853) KQ251_15400 PF00970 Oxidoreductase FAD-binding domain KQ251_15400 PF00042 Globin KQ251_15400 PF00175 Oxidoreductase NAD-binding domain KQ251_15405 PF02082 Transcriptional regulator KQ251_15410 PF01926 50S ribosome-binding GTPase KQ251_15420 PF00375 Sodium:dicarboxylate symporter family KQ251_15430 PF01553 Acyltransferase KQ251_15445 PF00270 DEAD/DEAH box helicase KQ251_15445 PF00271 Helicase conserved C-terminal domain KQ251_15445 PF17191 RecG wedge domain KQ251_15450 PF00156 Phosphoribosyl transferase domain KQ251_15455 PF00293 NUDIX domain KQ251_15460 PF03641 Possible lysine decarboxylase KQ251_15465 PF01544 CorA-like Mg2+ transporter protein KQ251_15475 PF05494 MlaC protein KQ251_15485 PF02405 Permease MlaE KQ251_15490 PF00005 ABC transporter KQ251_15500 PF00271 Helicase conserved C-terminal domain KQ251_15500 PF12343 Cold shock protein DEAD box A KQ251_15500 PF00270 DEAD/DEAH box helicase KQ251_15500 PF03880 DbpA RNA binding domain KQ251_15505 PF00459 Inositol monophosphatase family KQ251_15510 PF02780 Transketolase, C-terminal domain KQ251_15510 PF02779 Transketolase, pyrimidine binding domain KQ251_15510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KQ251_15515 PF00925 GTP cyclohydrolase II KQ251_15520 PF01218 Coproporphyrinogen III oxidase KQ251_15525 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KQ251_15525 PF01488 Shikimate / quinate 5-dehydrogenase KQ251_15525 PF08501 Shikimate dehydrogenase substrate binding domain KQ251_15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_15535 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_15535 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_15545 PF04024 PspC domain KQ251_15550 PF00571 CBS domain KQ251_15575 PF02091 Glycyl-tRNA synthetase alpha subunit KQ251_15580 PF05746 DALR anticodon binding domain KQ251_15580 PF02092 Glycyl-tRNA synthetase beta subunit KQ251_15590 PF00892 EamA-like transporter family KQ251_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_15595 PF03466 LysR substrate binding domain KQ251_15610 PF00082 Subtilase family KQ251_15610 PF05922 Peptidase inhibitor I9 KQ251_15625 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KQ251_15630 PF04996 Succinylarginine dihydrolase KQ251_15635 PF00171 Aldehyde dehydrogenase family KQ251_15640 PF04958 Arginine N-succinyltransferase beta subunit KQ251_15645 PF00202 Aminotransferase class-III KQ251_15650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ251_15650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ251_15655 PF00324 Amino acid permease KQ251_15660 PF00665 Integrase core domain KQ251_15660 PF13936 Helix-turn-helix domain KQ251_15670 PF08241 Methyltransferase domain KQ251_15690 PF13614 AAA domain KQ251_15695 PF01594 AI-2E family transporter KQ251_15700 PF00080 Copper/zinc superoxide dismutase (SODC) KQ251_15705 PF12805 FUSC-like inner membrane protein yccS KQ251_15710 PF07690 Major Facilitator Superfamily KQ251_15720 PF02525 Flavodoxin-like fold KQ251_15725 PF03992 Antibiotic biosynthesis monooxygenase KQ251_15735 PF02913 FAD linked oxidases, C-terminal domain KQ251_15735 PF01565 FAD binding domain KQ251_15740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ251_15740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ251_15745 PF00892 EamA-like transporter family KQ251_15750 PF00892 EamA-like transporter family KQ251_15760 PF01925 Sulfite exporter TauE/SafE KQ251_15765 PF16198 tRNA pseudouridylate synthase B C-terminal domain KQ251_15765 PF09157 Pseudouridine synthase II TruB, C-terminal KQ251_15765 PF01509 TruB family pseudouridylate synthase (N terminal domain) KQ251_15770 PF03280 Proteobacterial lipase chaperone protein KQ251_15775 PF00561 alpha/beta hydrolase fold KQ251_15780 PF01245 Ribosomal protein L19 KQ251_15785 PF01746 tRNA (Guanine-1)-methyltransferase KQ251_15790 PF05239 PRC-barrel domain KQ251_15790 PF01782 RimM N-terminal domain KQ251_15795 PF00886 Ribosomal protein S16 KQ251_15835 PF02401 LytB protein KQ251_15840 PF00625 Guanylate kinase KQ251_15845 PF01192 RNA polymerase Rpb6 KQ251_15855 PF13291 ACT domain KQ251_15855 PF04607 Region found in RelA / SpoT proteins KQ251_15855 PF02824 TGS domain KQ251_15860 PF01042 Endoribonuclease L-PSP KQ251_15865 PF04324 BFD-like [2Fe-2S] binding domain KQ251_15870 PF00210 Ferritin-like domain KQ251_15875 PF15864 Protein glycosylation ligase KQ251_15875 PF04932 O-Antigen ligase KQ251_15875 PF11846 Virulence factor membrane-bound polymerase, C-terminal KQ251_15885 PF07963 Prokaryotic N-terminal methylation motif KQ251_15885 PF00114 Pilin (bacterial filament) KQ251_15895 PF04536 TPM domain KQ251_15900 PF04011 LemA family KQ251_15910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ251_15910 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_15915 PF01493 GXGXG motif KQ251_15915 PF00310 Glutamine amidotransferases class-II KQ251_15915 PF04898 Glutamate synthase central domain KQ251_15915 PF01645 Conserved region in glutamate synthase KQ251_15925 PF01761 3-dehydroquinate synthase KQ251_15930 PF01202 Shikimate kinase KQ251_15935 PF03958 Bacterial type II/III secretion system short domain KQ251_15935 PF00263 Bacterial type II and III secretion system protein KQ251_15935 PF11741 AMIN domain KQ251_15935 PF07660 Secretin and TonB N terminus short domain KQ251_15945 PF04350 Pilus assembly protein, PilO KQ251_15950 PF05137 Fimbrial assembly protein (PilN) KQ251_15955 PF11104 Type IV pilus assembly protein PilM; KQ251_15960 PF00905 Penicillin binding protein transpeptidase domain KQ251_15960 PF00912 Transglycosylase KQ251_15960 PF17092 Penicillin-binding protein OB-like domain KQ251_15965 PF13847 Methyltransferase domain KQ251_15975 PF00953 Glycosyl transferase family 4 KQ251_15980 PF01225 Mur ligase family, catalytic domain KQ251_15980 PF02875 Mur ligase family, glutamate ligase domain KQ251_15980 PF08245 Mur ligase middle domain KQ251_15985 PF01225 Mur ligase family, catalytic domain KQ251_15985 PF02875 Mur ligase family, glutamate ligase domain KQ251_15985 PF08245 Mur ligase middle domain KQ251_15990 PF03717 Penicillin-binding Protein dimerisation domain KQ251_15990 PF00905 Penicillin binding protein transpeptidase domain KQ251_16000 PF01795 MraW methylase family KQ251_16015 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ251_16030 PF00324 Amino acid permease KQ251_16060 PF01545 Cation efflux family KQ251_16065 PF00873 AcrB/AcrD/AcrF family KQ251_16070 PF00529 HlyD membrane-fusion protein of T1SS KQ251_16070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_16095 PF00005 ABC transporter KQ251_16095 PF12848 ABC transporter KQ251_16100 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ251_16105 PF00106 short chain dehydrogenase KQ251_16110 PF01740 STAS domain KQ251_16110 PF00916 Sulfate permease family KQ251_16115 PF17674 HHH domain KQ251_16115 PF00575 S1 RNA binding domain KQ251_16115 PF09371 Tex-like protein N-terminal domain KQ251_16115 PF16921 Tex protein YqgF-like domain KQ251_16120 PF00072 Response regulator receiver domain KQ251_16120 PF00486 Transcriptional regulatory protein, C terminal KQ251_16125 PF00672 HAMP domain KQ251_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_16125 PF00512 His Kinase A (phospho-acceptor) domain KQ251_16135 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KQ251_16135 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KQ251_16140 PF00583 Acetyltransferase (GNAT) family KQ251_16160 PF00475 Imidazoleglycerol-phosphate dehydratase KQ251_16165 PF00117 Glutamine amidotransferase class-I KQ251_16180 PF00977 Histidine biosynthesis protein KQ251_16205 PF01636 Phosphotransferase enzyme family KQ251_16210 PF00977 Histidine biosynthesis protein KQ251_16225 PF00230 Major intrinsic protein KQ251_16250 PF02705 K+ potassium transporter KQ251_16260 PF13356 Arm DNA-binding domain KQ251_16260 PF00589 Phage integrase family KQ251_16295 PF00772 DnaB-like helicase N terminal domain KQ251_16295 PF03796 DnaB-like helicase C terminal domain KQ251_16370 PF13005 zinc-finger binding domain of transposase IS66 KQ251_16370 PF13007 Transposase C of IS166 homeodomain KQ251_16370 PF13817 IS66 C-terminal element KQ251_16370 PF03050 Transposase IS66 family KQ251_16380 PF13676 TIR domain KQ251_16395 PF13676 TIR domain KQ251_16405 PF13005 zinc-finger binding domain of transposase IS66 KQ251_16405 PF13007 Transposase C of IS166 homeodomain KQ251_16405 PF13817 IS66 C-terminal element KQ251_16405 PF03050 Transposase IS66 family KQ251_16445 PF02525 Flavodoxin-like fold KQ251_16450 PF01638 HxlR-like helix-turn-helix KQ251_16490 PF02311 AraC-like ligand binding domain KQ251_16490 PF12833 Helix-turn-helix domain KQ251_16495 PF00248 Aldo/keto reductase family KQ251_16515 PF03466 LysR substrate binding domain KQ251_16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_16520 PF07690 Major Facilitator Superfamily KQ251_16540 PF01593 Flavin containing amine oxidoreductase KQ251_16545 PF05726 Pirin C-terminal cupin domain KQ251_16545 PF02678 Pirin KQ251_16550 PF00857 Isochorismatase family KQ251_16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_16560 PF00171 Aldehyde dehydrogenase family KQ251_16565 PF00202 Aminotransferase class-III KQ251_16570 PF00392 Bacterial regulatory proteins, gntR family KQ251_16570 PF00155 Aminotransferase class I and II KQ251_16575 PF00324 Amino acid permease KQ251_16585 PF03591 AzlC protein KQ251_16595 PF00436 Single-strand binding protein family KQ251_16600 PF07690 Major Facilitator Superfamily KQ251_16610 PF03070 TENA/THI-4/PQQC family KQ251_16610 PF02581 Thiamine monophosphate synthase KQ251_16610 PF08543 Phosphomethylpyrimidine kinase KQ251_16615 PF06942 GlpM protein KQ251_16625 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_16625 PF00107 Zinc-binding dehydrogenase KQ251_16630 PF16925 Tetracyclin repressor-like, C-terminal domain KQ251_16630 PF00440 Bacterial regulatory proteins, tetR family KQ251_16635 PF00005 ABC transporter KQ251_16635 PF17755 UvrA DNA-binding domain KQ251_16635 PF17760 UvrA interaction domain KQ251_16640 PF00990 Diguanylate cyclase, GGDEF domain KQ251_16650 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_16660 PF00474 Sodium:solute symporter family KQ251_16665 PF04341 Protein of unknown function, DUF485 KQ251_16670 PF00072 Response regulator receiver domain KQ251_16670 PF01627 Hpt domain KQ251_16670 PF00512 His Kinase A (phospho-acceptor) domain KQ251_16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_16670 PF00672 HAMP domain KQ251_16680 PF00072 Response regulator receiver domain KQ251_16680 PF00196 Bacterial regulatory proteins, luxR family KQ251_16685 PF03358 NADPH-dependent FMN reductase KQ251_16690 PF00296 Luciferase-like monooxygenase KQ251_16695 PF01037 Lrp/AsnC ligand binding domain KQ251_16700 PF00857 Isochorismatase family KQ251_16705 PF00501 AMP-binding enzyme KQ251_16705 PF13193 AMP-binding enzyme C-terminal domain KQ251_16705 PF16177 Acetyl-coenzyme A synthetase N-terminus KQ251_16715 PF00924 Mechanosensitive ion channel KQ251_16720 PF04452 RNA methyltransferase KQ251_16725 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KQ251_16730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_16755 PF01368 DHH family KQ251_16755 PF02272 DHHA1 domain KQ251_16755 PF17768 RecJ OB domain KQ251_16760 PF01243 Pyridoxamine 5'-phosphate oxidase KQ251_16760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KQ251_16765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ251_16765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ251_16765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ251_16765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ251_16770 PF00571 CBS domain KQ251_16770 PF00478 IMP dehydrogenase / GMP reductase domain KQ251_16775 PF03692 Putative zinc- or iron-chelating domain KQ251_16780 PF01613 Flavin reductase like domain KQ251_16780 PF00258 Flavodoxin KQ251_16785 PF07715 TonB-dependent Receptor Plug Domain KQ251_16785 PF00593 TonB dependent receptor KQ251_16790 PF01169 Uncharacterized protein family UPF0016 KQ251_16800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ251_16800 PF00364 Biotin-requiring enzyme KQ251_16800 PF02817 e3 binding domain KQ251_16805 PF17831 Pyruvate dehydrogenase E1 component middle domain KQ251_16805 PF00456 Transketolase, thiamine diphosphate binding domain KQ251_16810 PF01551 Peptidase family M23 KQ251_16820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KQ251_16825 PF12327 FtsZ family, C-terminal domain KQ251_16825 PF00091 Tubulin/FtsZ family, GTPase domain KQ251_16830 PF02491 SHS2 domain inserted in FTSA KQ251_16835 PF03799 Cell division protein FtsQ KQ251_16835 PF08478 POTRA domain, FtsQ-type KQ251_16840 PF01820 D-ala D-ala ligase N-terminus KQ251_16840 PF07478 D-ala D-ala ligase C-terminus KQ251_16845 PF01225 Mur ligase family, catalytic domain KQ251_16845 PF02875 Mur ligase family, glutamate ligase domain KQ251_16845 PF08245 Mur ligase middle domain KQ251_16850 PF04101 Glycosyltransferase family 28 C-terminal domain KQ251_16850 PF03033 Glycosyltransferase family 28 N-terminal domain KQ251_16855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KQ251_16855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KQ251_16865 PF00593 TonB dependent receptor KQ251_16865 PF07715 TonB-dependent Receptor Plug Domain KQ251_16870 PF00156 Phosphoribosyl transferase domain KQ251_16875 PF03372 Endonuclease/Exonuclease/phosphatase family KQ251_16880 PF03960 ArsC family KQ251_16890 PF07859 alpha/beta hydrolase fold KQ251_16895 PF07694 5TMR of 5TMR-LYT KQ251_16895 PF00990 Diguanylate cyclase, GGDEF domain KQ251_16900 PF11412 Disulphide bond corrector protein DsbC KQ251_16900 PF02683 Cytochrome C biogenesis protein transmembrane region KQ251_16930 PF00576 HIUase/Transthyretin family KQ251_16935 PF00860 Permease family KQ251_16945 PF01494 FAD binding domain KQ251_16950 PF03561 Allantoicase repeat KQ251_16955 PF04115 Ureidoglycolate lyase KQ251_16960 PF00106 short chain dehydrogenase KQ251_16965 PF01751 Toprim domain KQ251_16965 PF00204 DNA gyrase B KQ251_16965 PF00986 DNA gyrase B subunit, carboxyl terminus KQ251_16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_16970 PF05728 Uncharacterised protein family (UPF0227) KQ251_17000 PF13296 Putative type VI secretion system Rhs element Vgr KQ251_17000 PF04717 Type VI secretion system, phage-baseplate injector KQ251_17000 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ251_17005 PF02600 Disulfide bond formation protein DsbB KQ251_17010 PF04262 Glutamate-cysteine ligase KQ251_17025 PF04286 Protein of unknown function (DUF445) KQ251_17030 PF00155 Aminotransferase class I and II KQ251_17035 PF01554 MatE KQ251_17040 PF00106 short chain dehydrogenase KQ251_17050 PF00486 Transcriptional regulatory protein, C terminal KQ251_17050 PF00072 Response regulator receiver domain KQ251_17055 PF00512 His Kinase A (phospho-acceptor) domain KQ251_17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_17055 PF11808 Phosphate regulon sensor protein PhoR KQ251_17055 PF00989 PAS fold KQ251_17065 PF00665 Integrase core domain KQ251_17065 PF13936 Helix-turn-helix domain KQ251_17075 PF03069 Acetamidase/Formamidase family KQ251_17080 PF02666 Phosphatidylserine decarboxylase KQ251_17085 PF00581 Rhodanese-like domain KQ251_17090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ251_17090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KQ251_17100 PF00199 Catalase KQ251_17100 PF06628 Catalase-related immune-responsive KQ251_17105 PF02580 D-Tyr-tRNA(Tyr) deacylase KQ251_17130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ251_17130 PF00925 GTP cyclohydrolase II KQ251_17135 PF00885 6,7-dimethyl-8-ribityllumazine synthase KQ251_17140 PF01029 NusB family KQ251_17145 PF02769 AIR synthase related protein, C-terminal domain KQ251_17145 PF00586 AIR synthase related protein, N-terminal domain KQ251_17150 PF04608 Phosphatidylglycerophosphatase A KQ251_17155 PF12804 MobA-like NTP transferase domain KQ251_17155 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_17155 PF14602 Hexapeptide repeat of succinyl-transferase KQ251_17160 PF01380 SIS domain KQ251_17165 PF01177 Asp/Glu/Hydantoin racemase KQ251_17180 PF00491 Arginase family KQ251_17185 PF01979 Amidohydrolase family KQ251_17190 PF00324 Amino acid permease KQ251_17195 PF00221 Aromatic amino acid lyase KQ251_17200 PF17392 Urocanase C-terminal domain KQ251_17200 PF17391 Urocanase N-terminal domain KQ251_17200 PF01175 Urocanase Rossmann-like domain KQ251_17205 PF05962 HutD KQ251_17210 PF00392 Bacterial regulatory proteins, gntR family KQ251_17210 PF07702 UTRA domain KQ251_17220 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ251_17220 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ251_17230 PF00324 Amino acid permease KQ251_17240 PF02798 Glutathione S-transferase, N-terminal domain KQ251_17240 PF14497 Glutathione S-transferase, C-terminal domain KQ251_17245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_17255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_17260 PF04463 Protein of unknown function (DUF523) KQ251_17265 PF01554 MatE KQ251_17270 PF01758 Sodium Bile acid symporter family KQ251_17275 PF00857 Isochorismatase family KQ251_17280 PF00701 Dihydrodipicolinate synthetase family KQ251_17290 PF01259 SAICAR synthetase KQ251_17300 PF01226 Formate/nitrite transporter KQ251_17305 PF12002 MgsA AAA+ ATPase C terminal KQ251_17305 PF16193 AAA C-terminal domain KQ251_17305 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_17315 PF03692 Putative zinc- or iron-chelating domain KQ251_17320 PF07043 Protein of unknown function (DUF1328) KQ251_17335 PF10576 Iron-sulfur binding domain of endonuclease III KQ251_17335 PF00633 Helix-hairpin-helix motif KQ251_17335 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ251_17335 PF14815 NUDIX domain KQ251_17350 PF03352 Methyladenine glycosylase KQ251_17355 PF00107 Zinc-binding dehydrogenase KQ251_17355 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_17360 PF00392 Bacterial regulatory proteins, gntR family KQ251_17360 PF00155 Aminotransferase class I and II KQ251_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_17375 PF03466 LysR substrate binding domain KQ251_17380 PF00248 Aldo/keto reductase family KQ251_17385 PF07690 Major Facilitator Superfamily KQ251_17395 PF05173 Dihydrodipicolinate reductase, C-terminus KQ251_17395 PF01113 Dihydrodipicolinate reductase, N-terminus KQ251_17405 PF00226 DnaJ domain KQ251_17405 PF00684 DnaJ central domain KQ251_17405 PF01556 DnaJ C terminal domain KQ251_17415 PF00873 AcrB/AcrD/AcrF family KQ251_17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_17425 PF08361 MAATS-type transcriptional repressor, C-terminal region KQ251_17425 PF00440 Bacterial regulatory proteins, tetR family KQ251_17430 PF00311 Phosphoenolpyruvate carboxylase KQ251_17435 PF00860 Permease family KQ251_17440 PF03466 LysR substrate binding domain KQ251_17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_17455 PF00920 Dehydratase family KQ251_17460 PF00551 Formyl transferase KQ251_17460 PF02911 Formyl transferase, C-terminal domain KQ251_17465 PF01029 NusB family KQ251_17465 PF01189 16S rRNA methyltransferase RsmB/F KQ251_17475 PF00209 Sodium:neurotransmitter symporter family KQ251_17520 PF00579 tRNA synthetases class I (W and Y) KQ251_17525 PF03702 Anhydro-N-acetylmuramic acid kinase KQ251_17530 PF00561 alpha/beta hydrolase fold KQ251_17535 PF01521 Iron-sulphur cluster biosynthesis KQ251_17555 PF00005 ABC transporter KQ251_17555 PF12848 ABC transporter KQ251_17560 PF09335 SNARE associated Golgi protein KQ251_17570 PF00986 DNA gyrase B subunit, carboxyl terminus KQ251_17570 PF00204 DNA gyrase B KQ251_17570 PF18053 DNA gyrase B subunit insert domain KQ251_17570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_17570 PF01751 Toprim domain KQ251_17575 PF02463 RecF/RecN/SMC N terminal domain KQ251_17580 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ251_17580 PF02767 DNA polymerase III beta subunit, central domain KQ251_17580 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ251_17590 PF00308 Bacterial dnaA protein KQ251_17590 PF08299 Bacterial dnaA protein helix-turn-helix KQ251_17590 PF11638 DnaA N-terminal domain KQ251_17595 PF00468 Ribosomal protein L34 KQ251_17600 PF00825 Ribonuclease P KQ251_17605 PF01809 Putative membrane protein insertion efficiency factor KQ251_17610 PF02096 60Kd inner membrane protein KQ251_17610 PF14849 YidC periplasmic domain KQ251_17615 PF12631 MnmE helical domain KQ251_17615 PF10396 GTP-binding protein TrmE N-terminus KQ251_17615 PF01926 50S ribosome-binding GTPase KQ251_17620 PF02583 Metal-sensitive transcriptional repressor KQ251_17625 PF16916 Dimerisation domain of Zinc Transporter KQ251_17625 PF01545 Cation efflux family KQ251_17630 PF13098 Thioredoxin-like domain KQ251_17630 PF10411 Disulfide bond isomerase protein N-terminus KQ251_17640 PF00156 Phosphoribosyl transferase domain KQ251_17645 PF01979 Amidohydrolase family KQ251_17650 PF00355 Rieske [2Fe-2S] domain KQ251_17655 PF03738 Glutathionylspermidine synthase preATP-grasp KQ251_17670 PF03741 Integral membrane protein TerC family KQ251_17675 PF01569 PAP2 superfamily KQ251_17685 PF01225 Mur ligase family, catalytic domain KQ251_17685 PF08245 Mur ligase middle domain KQ251_17685 PF02875 Mur ligase family, glutamate ligase domain KQ251_17695 PF00731 AIR carboxylase KQ251_17700 PF02222 ATP-grasp domain KQ251_17700 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KQ251_17705 PF13406 Transglycosylase SLT domain KQ251_17725 PF00012 Hsp70 protein KQ251_17730 PF01025 GrpE KQ251_17755 PF07859 alpha/beta hydrolase fold KQ251_17760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ251_17800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_17805 PF01252 Signal peptidase (SPase) II KQ251_17810 PF06827 Zinc finger found in FPG and IleRS KQ251_17810 PF08264 Anticodon-binding domain of tRNA KQ251_17810 PF00133 tRNA synthetases class I (I, L, M and V) KQ251_17815 PF01687 Riboflavin kinase KQ251_17815 PF06574 FAD synthetase KQ251_17825 PF01048 Phosphorylase superfamily KQ251_17830 PF08362 YcdC-like protein, C-terminal region KQ251_17830 PF00440 Bacterial regulatory proteins, tetR family KQ251_17835 PF00005 ABC transporter KQ251_17840 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_17845 PF00296 Luciferase-like monooxygenase KQ251_17850 PF09084 NMT1/THI5 like KQ251_17855 PF09084 NMT1/THI5 like KQ251_17860 PF00583 Acetyltransferase (GNAT) family KQ251_17860 PF00696 Amino acid kinase family KQ251_17875 PF00106 short chain dehydrogenase KQ251_17880 PF13419 Haloacid dehalogenase-like hydrolase KQ251_17890 PF01323 DSBA-like thioredoxin domain KQ251_17895 PF00440 Bacterial regulatory proteins, tetR family KQ251_17900 PF00440 Bacterial regulatory proteins, tetR family KQ251_17905 PF00175 Oxidoreductase NAD-binding domain KQ251_17910 PF00487 Fatty acid desaturase KQ251_17915 PF01138 3' exoribonuclease family, domain 1 KQ251_17915 PF03725 3' exoribonuclease family, domain 2 KQ251_17925 PF04185 Phosphoesterase family KQ251_17925 PF05506 Domain of unknown function (DUF756) KQ251_17935 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KQ251_17935 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KQ251_17940 PF01510 N-acetylmuramoyl-L-alanine amidase KQ251_17945 PF03023 Lipid II flippase MurJ KQ251_17950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_17950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ251_17955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ251_17955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_17960 PF13614 AAA domain KQ251_17960 PF13807 G-rich domain on putative tyrosine kinase KQ251_17960 PF02706 Chain length determinant protein KQ251_17965 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ251_17970 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KQ251_17970 PF02563 Polysaccharide biosynthesis/export protein KQ251_17970 PF10531 SLBB domain KQ251_17975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ251_17975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ251_17975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ251_17980 PF01370 NAD dependent epimerase/dehydratase family KQ251_17995 PF13477 Glycosyl transferase 4-like KQ251_17995 PF00534 Glycosyl transferases group 1 KQ251_18000 PF02397 Bacterial sugar transferase KQ251_18005 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_18005 PF14602 Hexapeptide repeat of succinyl-transferase KQ251_18005 PF17836 PglD N-terminal domain KQ251_18010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KQ251_18015 PF02719 Polysaccharide biosynthesis protein KQ251_18020 PF00483 Nucleotidyl transferase KQ251_18025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ251_18025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ251_18025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ251_18030 PF00342 Phosphoglucose isomerase KQ251_18035 PF16363 GDP-mannose 4,6 dehydratase KQ251_18040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ251_18040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ251_18040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ251_18040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ251_18045 PF02652 L-lactate permease KQ251_18050 PF07729 FCD domain KQ251_18050 PF00392 Bacterial regulatory proteins, gntR family KQ251_18055 PF01070 FMN-dependent dehydrogenase KQ251_18060 PF01565 FAD binding domain KQ251_18060 PF09330 D-lactate dehydrogenase, membrane binding KQ251_18065 PF00155 Aminotransferase class I and II KQ251_18075 PF00392 Bacterial regulatory proteins, gntR family KQ251_18075 PF07729 FCD domain KQ251_18085 PF00285 Citrate synthase, C-terminal domain KQ251_18090 PF00330 Aconitase family (aconitate hydratase) KQ251_18090 PF00694 Aconitase C-terminal domain KQ251_18110 PF00293 NUDIX domain KQ251_18120 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_18120 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_18140 PF00849 RNA pseudouridylate synthase KQ251_18155 PF00593 TonB dependent receptor KQ251_18155 PF07715 TonB-dependent Receptor Plug Domain KQ251_18165 PF01037 Lrp/AsnC ligand binding domain KQ251_18170 PF01266 FAD dependent oxidoreductase KQ251_18175 PF00842 Alanine racemase, C-terminal domain KQ251_18175 PF01168 Alanine racemase, N-terminal domain KQ251_18180 PF01042 Endoribonuclease L-PSP KQ251_18185 PF00324 Amino acid permease KQ251_18190 PF00324 Amino acid permease KQ251_18200 PF00171 Aldehyde dehydrogenase family KQ251_18205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ251_18205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ251_18210 PF13193 AMP-binding enzyme C-terminal domain KQ251_18210 PF00501 AMP-binding enzyme KQ251_18215 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_18215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_18215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_18220 PF00378 Enoyl-CoA hydratase/isomerase KQ251_18225 PF00378 Enoyl-CoA hydratase/isomerase KQ251_18230 PF00083 Sugar (and other) transporter KQ251_18230 PF07690 Major Facilitator Superfamily KQ251_18235 PF00765 Autoinducer synthase KQ251_18245 PF13737 Transposase DDE domain KQ251_18250 PF00196 Bacterial regulatory proteins, luxR family KQ251_18250 PF03472 Autoinducer binding domain KQ251_18255 PF00501 AMP-binding enzyme KQ251_18260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_18260 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_18260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_18265 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_18265 PF08242 Methyltransferase domain KQ251_18265 PF00550 Phosphopantetheine attachment site KQ251_18265 PF14765 Polyketide synthase dehydratase KQ251_18265 PF00975 Thioesterase domain KQ251_18265 PF16197 Ketoacyl-synthetase C-terminal extension KQ251_18265 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_18270 PF00975 Thioesterase domain KQ251_18270 PF00550 Phosphopantetheine attachment site KQ251_18270 PF00668 Condensation domain KQ251_18270 PF13193 AMP-binding enzyme C-terminal domain KQ251_18270 PF00501 AMP-binding enzyme KQ251_18285 PF16363 GDP-mannose 4,6 dehydratase KQ251_18290 PF01648 4'-phosphopantetheinyl transferase superfamily KQ251_18300 PF01722 BolA-like protein KQ251_18310 PF13614 AAA domain KQ251_18325 PF09335 SNARE associated Golgi protein KQ251_18330 PF07681 DoxX KQ251_18335 PF04286 Protein of unknown function (DUF445) KQ251_18340 PF02540 NAD synthase KQ251_18340 PF00958 GMP synthase C terminal domain KQ251_18340 PF00117 Glutamine amidotransferase class-I KQ251_18345 PF13427 Domain of unknown function (DUF4111) KQ251_18345 PF01909 Nucleotidyltransferase domain KQ251_18350 PF03551 Transcriptional regulator PadR-like family KQ251_18360 PF02678 Pirin KQ251_18360 PF05726 Pirin C-terminal cupin domain KQ251_18380 PF05746 DALR anticodon binding domain KQ251_18380 PF00750 tRNA synthetases class I (R) KQ251_18380 PF03485 Arginyl tRNA synthetase N terminal domain KQ251_18385 PF03949 Malic enzyme, NAD binding domain KQ251_18385 PF00390 Malic enzyme, N-terminal domain KQ251_18390 PF04261 Dyp-type peroxidase family KQ251_18395 PF01810 LysE type translocator KQ251_18400 PF00950 ABC 3 transport family KQ251_18405 PF00005 ABC transporter KQ251_18425 PF00119 ATP synthase A chain KQ251_18430 PF00137 ATP synthase subunit C KQ251_18435 PF00430 ATP synthase B/B' CF(0) KQ251_18440 PF00213 ATP synthase delta (OSCP) subunit KQ251_18445 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ251_18445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ251_18445 PF00306 ATP synthase alpha/beta chain, C terminal domain KQ251_18450 PF00231 ATP synthase KQ251_18455 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ251_18455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ251_18460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KQ251_18470 PF00255 Glutathione peroxidase KQ251_18480 PF07690 Major Facilitator Superfamily KQ251_18485 PF00440 Bacterial regulatory proteins, tetR family KQ251_18490 PF00892 EamA-like transporter family KQ251_18495 PF01300 Telomere recombination KQ251_18500 PF02481 DNA recombination-mediator protein A KQ251_18500 PF17782 DprA winged helix domain KQ251_18510 PF01327 Polypeptide deformylase KQ251_18520 PF00593 TonB dependent receptor KQ251_18520 PF07715 TonB-dependent Receptor Plug Domain KQ251_18535 PF00440 Bacterial regulatory proteins, tetR family KQ251_18570 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_18580 PF03358 NADPH-dependent FMN reductase KQ251_18600 PF11842 Domain of unknown function (DUF3362) KQ251_18600 PF04055 Radical SAM superfamily KQ251_18600 PF08497 Radical SAM N-terminal KQ251_18615 PF11799 impB/mucB/samB family C-terminal domain KQ251_18615 PF11798 IMS family HHH motif KQ251_18615 PF00817 impB/mucB/samB family KQ251_18625 PF07690 Major Facilitator Superfamily KQ251_18630 PF03641 Possible lysine decarboxylase KQ251_18635 PF03471 Transporter associated domain KQ251_18635 PF03741 Integral membrane protein TerC family KQ251_18640 PF02810 SEC-C motif KQ251_18645 PF03458 UPF0126 domain KQ251_18650 PF07690 Major Facilitator Superfamily KQ251_18655 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ251_18655 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ251_18660 PF00501 AMP-binding enzyme KQ251_18660 PF13193 AMP-binding enzyme C-terminal domain KQ251_18675 PF00719 Inorganic pyrophosphatase KQ251_18680 PF03573 outer membrane porin, OprD family KQ251_18695 PF00701 Dihydrodipicolinate synthetase family KQ251_18705 PF00155 Aminotransferase class I and II KQ251_18705 PF00392 Bacterial regulatory proteins, gntR family KQ251_18710 PF01078 Magnesium chelatase, subunit ChlI KQ251_18710 PF13335 Magnesium chelatase, subunit ChlI C-terminal KQ251_18720 PF00665 Integrase core domain KQ251_18740 PF00872 Transposase, Mutator family KQ251_18755 PF00582 Universal stress protein family KQ251_18760 PF01740 STAS domain KQ251_18760 PF00916 Sulfate permease family KQ251_18770 PF13335 Magnesium chelatase, subunit ChlI C-terminal KQ251_18770 PF01078 Magnesium chelatase, subunit ChlI KQ251_18780 PF00543 Nitrogen regulatory protein P-II KQ251_18785 PF00909 Ammonium Transporter Family KQ251_18790 PF03477 ATP cone domain KQ251_18795 PF01872 RibD C-terminal domain KQ251_18795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ251_18805 PF00677 Lumazine binding domain KQ251_18825 PF00883 Cytosol aminopeptidase family, catalytic domain KQ251_18825 PF02789 Cytosol aminopeptidase family, N-terminal domain KQ251_18835 PF03739 Lipopolysaccharide export system permease LptF/LptG KQ251_18840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KQ251_18840 PF01676 Metalloenzyme superfamily KQ251_18845 PF00595 PDZ domain KQ251_18845 PF03572 Peptidase family S41 KQ251_18850 PF00072 Response regulator receiver domain KQ251_18850 PF00158 Sigma-54 interaction domain KQ251_18850 PF02954 Bacterial regulatory protein, Fis family KQ251_18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_18855 PF00512 His Kinase A (phospho-acceptor) domain KQ251_18860 PF00196 Bacterial regulatory proteins, luxR family KQ251_18860 PF00072 Response regulator receiver domain KQ251_18865 PF00768 D-alanyl-D-alanine carboxypeptidase KQ251_18870 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_18875 PF03447 Homoserine dehydrogenase, NAD binding domain KQ251_18875 PF00742 Homoserine dehydrogenase KQ251_18875 PF01842 ACT domain KQ251_18880 PF13098 Thioredoxin-like domain KQ251_18880 PF10411 Disulfide bond isomerase protein N-terminus KQ251_18885 PF00589 Phage integrase family KQ251_18885 PF02899 Phage integrase, N-terminal SAM-like domain KQ251_18895 PF02421 Ferrous iron transport protein B KQ251_18895 PF07664 Ferrous iron transport protein B C terminus KQ251_18895 PF07670 Nucleoside recognition KQ251_18905 PF08245 Mur ligase middle domain KQ251_18905 PF02875 Mur ligase family, glutamate ligase domain KQ251_18910 PF01098 Cell cycle protein KQ251_18915 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ251_18920 PF01258 Prokaryotic dksA/traR C4-type zinc finger KQ251_18925 PF00149 Calcineurin-like phosphoesterase KQ251_18930 PF00293 NUDIX domain KQ251_18935 PF13667 ThiC-associated domain KQ251_18935 PF01964 Radical SAM ThiC family KQ251_18950 PF00892 EamA-like transporter family KQ251_18955 PF02321 Outer membrane efflux protein KQ251_18960 PF01895 PhoU domain KQ251_18965 PF04362 Bacterial Fe(2+) trafficking KQ251_18970 PF14698 Argininosuccinate lyase C-terminal KQ251_18970 PF00206 Lyase KQ251_18975 PF07694 5TMR of 5TMR-LYT KQ251_18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_18975 PF06580 Histidine kinase KQ251_18980 PF04397 LytTr DNA-binding domain KQ251_18980 PF00072 Response regulator receiver domain KQ251_18985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KQ251_18985 PF03900 Porphobilinogen deaminase, C-terminal domain KQ251_19010 PF00816 H-NS histone family KQ251_19025 PF00263 Bacterial type II and III secretion system protein KQ251_19025 PF03958 Bacterial type II/III secretion system short domain KQ251_19030 PF12401 Protein of unknown function (DUF2662) KQ251_19030 PF00498 FHA domain KQ251_19035 PF13419 Haloacid dehalogenase-like hydrolase KQ251_19040 PF04715 Anthranilate synthase component I, N terminal region KQ251_19040 PF00425 chorismate binding enzyme KQ251_19065 PF00009 Elongation factor Tu GTP binding domain KQ251_19065 PF03144 Elongation factor Tu domain 2 KQ251_19065 PF03143 Elongation factor Tu C-terminal domain KQ251_19120 PF00565 Staphylococcal nuclease homologue KQ251_19125 PF00816 H-NS histone family KQ251_19170 PF00589 Phage integrase family KQ251_19170 PF02899 Phage integrase, N-terminal SAM-like domain KQ251_19175 PF13610 DDE domain KQ251_19200 PF00962 Adenosine/AMP deaminase KQ251_19210 PF03050 Transposase IS66 family KQ251_19210 PF13007 Transposase C of IS166 homeodomain KQ251_19210 PF13817 IS66 C-terminal element KQ251_19210 PF13005 zinc-finger binding domain of transposase IS66 KQ251_19255 PF13614 AAA domain KQ251_19260 PF17762 HTH domain found in ParB protein KQ251_19260 PF02195 ParB-like nuclease domain KQ251_19275 PF05816 Toxic anion resistance protein (TelA) KQ251_19295 PF00905 Penicillin binding protein transpeptidase domain KQ251_19305 PF13737 Transposase DDE domain KQ251_19400 PF01556 DnaJ C terminal domain KQ251_19400 PF00226 DnaJ domain KQ251_19400 PF00684 DnaJ central domain KQ251_19435 PF18272 single-stranded DNA binding TraI N-terminal subdomain KQ251_19435 PF08751 TrwC relaxase KQ251_19435 PF18340 DNA relaxase TraI 2B/2B-like domain KQ251_19435 PF07057 DNA helicase TraI KQ251_19470 PF02796 Helix-turn-helix domain of resolvase KQ251_19470 PF00239 Resolvase, N terminal domain KQ251_19485 PF01464 Transglycosylase SLT domain KQ251_19520 PF13098 Thioredoxin-like domain KQ251_19520 PF10411 Disulfide bond isomerase protein N-terminus KQ251_19555 PF06834 TraU protein KQ251_19565 PF06986 Type-1V conjugative transfer system mating pair stabilisation KQ251_19580 PF06122 Conjugative relaxosome accessory transposon protein KQ251_19605 PF00665 Integrase core domain KQ251_19625 PF00872 Transposase, Mutator family KQ251_19640 PF00582 Universal stress protein family KQ251_19645 PF01740 STAS domain KQ251_19645 PF00916 Sulfate permease family KQ251_19660 PF13438 Domain of unknown function (DUF4113) KQ251_19660 PF00817 impB/mucB/samB family KQ251_19660 PF11799 impB/mucB/samB family C-terminal domain KQ251_19660 PF11798 IMS family HHH motif KQ251_19670 PF13936 Helix-turn-helix domain KQ251_19670 PF00665 Integrase core domain KQ251_19690 PF01051 Initiator Replication protein KQ251_19715 PF07715 TonB-dependent Receptor Plug Domain KQ251_19715 PF00593 TonB dependent receptor KQ251_19735 PF05973 Phage derived protein Gp49-like (DUF891)