locus-tag class description BS615_00005 PF11638 DnaA N-terminal domain BS615_00005 PF08299 Bacterial dnaA protein helix-turn-helix BS615_00005 PF00308 Bacterial dnaA protein BS615_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BS615_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BS615_00010 PF02767 DNA polymerase III beta subunit, central domain BS615_00015 PF02463 RecF/RecN/SMC N terminal domain BS615_00020 PF00204 DNA gyrase B BS615_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BS615_00020 PF18053 DNA gyrase B subunit insert domain BS615_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_00020 PF01751 Toprim domain BS615_00030 PF09335 SNARE associated Golgi protein BS615_00035 PF00005 ABC transporter BS615_00035 PF12848 ABC transporter BS615_00055 PF01521 Iron-sulphur cluster biosynthesis BS615_00060 PF00561 alpha/beta hydrolase fold BS615_00065 PF03702 Anhydro-N-acetylmuramic acid kinase BS615_00070 PF00579 tRNA synthetases class I (W and Y) BS615_00110 PF00209 Sodium:neurotransmitter symporter family BS615_00120 PF01189 16S rRNA methyltransferase RsmB/F BS615_00120 PF01029 NusB family BS615_00125 PF00551 Formyl transferase BS615_00125 PF02911 Formyl transferase, C-terminal domain BS615_00130 PF00920 Dehydratase family BS615_00145 PF03466 LysR substrate binding domain BS615_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_00150 PF00860 Permease family BS615_00155 PF00311 Phosphoenolpyruvate carboxylase BS615_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region BS615_00160 PF00440 Bacterial regulatory proteins, tetR family BS615_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_00170 PF00873 AcrB/AcrD/AcrF family BS615_00180 PF00684 DnaJ central domain BS615_00180 PF00226 DnaJ domain BS615_00180 PF01556 DnaJ C terminal domain BS615_00190 PF05173 Dihydrodipicolinate reductase, C-terminus BS615_00190 PF01113 Dihydrodipicolinate reductase, N-terminus BS615_00200 PF07690 Major Facilitator Superfamily BS615_00205 PF00248 Aldo/keto reductase family BS615_00210 PF03466 LysR substrate binding domain BS615_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_00220 PF00155 Aminotransferase class I and II BS615_00220 PF00392 Bacterial regulatory proteins, gntR family BS615_00225 PF00107 Zinc-binding dehydrogenase BS615_00225 PF08240 Alcohol dehydrogenase GroES-like domain BS615_00230 PF03352 Methyladenine glycosylase BS615_00245 PF00633 Helix-hairpin-helix motif BS615_00245 PF00730 HhH-GPD superfamily base excision DNA repair protein BS615_00245 PF14815 NUDIX domain BS615_00245 PF10576 Iron-sulfur binding domain of endonuclease III BS615_00260 PF07043 Protein of unknown function (DUF1328) BS615_00265 PF03692 Putative zinc- or iron-chelating domain BS615_00270 PF07995 Glucose / Sorbosone dehydrogenase BS615_00275 PF00004 ATPase family associated with various cellular activities (AAA) BS615_00275 PF12002 MgsA AAA+ ATPase C terminal BS615_00275 PF16193 AAA C-terminal domain BS615_00280 PF01226 Formate/nitrite transporter BS615_00290 PF01259 SAICAR synthetase BS615_00300 PF00701 Dihydrodipicolinate synthetase family BS615_00305 PF00857 Isochorismatase family BS615_00310 PF01758 Sodium Bile acid symporter family BS615_00320 PF04463 Protein of unknown function (DUF523) BS615_00325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BS615_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BS615_00340 PF02798 Glutathione S-transferase, N-terminal domain BS615_00340 PF14497 Glutathione S-transferase, C-terminal domain BS615_00350 PF00324 Amino acid permease BS615_00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain BS615_00360 PF07683 Cobalamin synthesis protein cobW C-terminal domain BS615_00370 PF00392 Bacterial regulatory proteins, gntR family BS615_00370 PF07702 UTRA domain BS615_00375 PF05962 HutD BS615_00380 PF01175 Urocanase Rossmann-like domain BS615_00380 PF17392 Urocanase C-terminal domain BS615_00380 PF17391 Urocanase N-terminal domain BS615_00385 PF00221 Aromatic amino acid lyase BS615_00390 PF00324 Amino acid permease BS615_00395 PF01979 Amidohydrolase family BS615_00400 PF00491 Arginase family BS615_00425 PF01177 Asp/Glu/Hydantoin racemase BS615_00430 PF01380 SIS domain BS615_00435 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_00435 PF14602 Hexapeptide repeat of succinyl-transferase BS615_00435 PF12804 MobA-like NTP transferase domain BS615_00440 PF04608 Phosphatidylglycerophosphatase A BS615_00445 PF00586 AIR synthase related protein, N-terminal domain BS615_00445 PF02769 AIR synthase related protein, C-terminal domain BS615_00450 PF01029 NusB family BS615_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase BS615_00460 PF00925 GTP cyclohydrolase II BS615_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BS615_00490 PF02580 D-Tyr-tRNA(Tyr) deacylase BS615_00495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BS615_00495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BS615_00500 PF00581 Rhodanese-like domain BS615_00505 PF02666 Phosphatidylserine decarboxylase BS615_00510 PF03069 Acetamidase/Formamidase family BS615_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_00530 PF00512 His Kinase A (phospho-acceptor) domain BS615_00530 PF00989 PAS fold BS615_00530 PF11808 Phosphate regulon sensor protein PhoR BS615_00535 PF00486 Transcriptional regulatory protein, C terminal BS615_00535 PF00072 Response regulator receiver domain BS615_00545 PF00106 short chain dehydrogenase BS615_00550 PF01554 MatE BS615_00555 PF00155 Aminotransferase class I and II BS615_00560 PF04286 Protein of unknown function (DUF445) BS615_00575 PF04262 Glutamate-cysteine ligase BS615_00580 PF02600 Disulfide bond formation protein DsbB BS615_00595 PF04717 Type VI secretion system, phage-baseplate injector BS615_00600 PF01476 LysM domain BS615_00600 PF00877 NlpC/P60 family BS615_00620 PF05728 Uncharacterised protein family (UPF0227) BS615_00630 PF00106 short chain dehydrogenase BS615_00635 PF04115 Ureidoglycolate lyase BS615_00640 PF03561 Allantoicase repeat BS615_00645 PF01494 FAD binding domain BS615_00655 PF00860 Permease family BS615_00660 PF00576 HIUase/Transthyretin family BS615_00690 PF11412 Disulphide bond corrector protein DsbC BS615_00690 PF02683 Cytochrome C biogenesis protein transmembrane region BS615_00695 PF07694 5TMR of 5TMR-LYT BS615_00695 PF00990 Diguanylate cyclase, GGDEF domain BS615_00700 PF07859 alpha/beta hydrolase fold BS615_00710 PF03960 ArsC family BS615_00715 PF03372 Endonuclease/Exonuclease/phosphatase family BS615_00720 PF00156 Phosphoribosyl transferase domain BS615_00725 PF07715 TonB-dependent Receptor Plug Domain BS615_00725 PF00593 TonB dependent receptor BS615_00735 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BS615_00735 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BS615_00740 PF04101 Glycosyltransferase family 28 C-terminal domain BS615_00740 PF03033 Glycosyltransferase family 28 N-terminal domain BS615_00745 PF02875 Mur ligase family, glutamate ligase domain BS615_00745 PF08245 Mur ligase middle domain BS615_00745 PF01225 Mur ligase family, catalytic domain BS615_00750 PF07478 D-ala D-ala ligase C-terminus BS615_00750 PF01820 D-ala D-ala ligase N-terminus BS615_00755 PF08478 POTRA domain, FtsQ-type BS615_00755 PF03799 Cell division protein FtsQ BS615_00760 PF02491 SHS2 domain inserted in FTSA BS615_00765 PF12327 FtsZ family, C-terminal domain BS615_00765 PF00091 Tubulin/FtsZ family, GTPase domain BS615_00770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BS615_00780 PF01551 Peptidase family M23 BS615_00785 PF17831 Pyruvate dehydrogenase E1 component middle domain BS615_00785 PF00456 Transketolase, thiamine diphosphate binding domain BS615_00790 PF02817 e3 binding domain BS615_00790 PF00364 Biotin-requiring enzyme BS615_00790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BS615_00800 PF01169 Uncharacterized protein family UPF0016 BS615_00805 PF07715 TonB-dependent Receptor Plug Domain BS615_00805 PF00593 TonB dependent receptor BS615_00810 PF01613 Flavin reductase like domain BS615_00810 PF00258 Flavodoxin BS615_00815 PF03692 Putative zinc- or iron-chelating domain BS615_00820 PF00571 CBS domain BS615_00820 PF00478 IMP dehydrogenase / GMP reductase domain BS615_00825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BS615_00825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BS615_00825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BS615_00825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BS615_00830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BS615_00830 PF01243 Pyridoxamine 5'-phosphate oxidase BS615_00835 PF01368 DHH family BS615_00835 PF17768 RecJ OB domain BS615_00835 PF02272 DHHA1 domain BS615_00845 PF00472 RF-1 domain BS615_00845 PF03462 PCRF domain BS615_00855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BS615_00860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BS615_00865 PF04452 RNA methyltransferase BS615_00870 PF00924 Mechanosensitive ion channel BS615_00880 PF00501 AMP-binding enzyme BS615_00880 PF13193 AMP-binding enzyme C-terminal domain BS615_00880 PF16177 Acetyl-coenzyme A synthetase N-terminus BS615_00885 PF00857 Isochorismatase family BS615_00890 PF01037 Lrp/AsnC ligand binding domain BS615_00895 PF00872 Transposase, Mutator family BS615_00900 PF00296 Luciferase-like monooxygenase BS615_00905 PF03358 NADPH-dependent FMN reductase BS615_00910 PF00072 Response regulator receiver domain BS615_00910 PF00196 Bacterial regulatory proteins, luxR family BS615_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_00920 PF00512 His Kinase A (phospho-acceptor) domain BS615_00920 PF00072 Response regulator receiver domain BS615_00920 PF01627 Hpt domain BS615_00920 PF00672 HAMP domain BS615_00925 PF04341 Protein of unknown function, DUF485 BS615_00930 PF00474 Sodium:solute symporter family BS615_00940 PF02028 BCCT, betaine/carnitine/choline family transporter BS615_00960 PF17755 UvrA DNA-binding domain BS615_00960 PF00005 ABC transporter BS615_00960 PF17760 UvrA interaction domain BS615_00965 PF16925 Tetracyclin repressor-like, C-terminal domain BS615_00965 PF00440 Bacterial regulatory proteins, tetR family BS615_00970 PF08240 Alcohol dehydrogenase GroES-like domain BS615_00970 PF00107 Zinc-binding dehydrogenase BS615_00980 PF06942 GlpM protein BS615_00985 PF08543 Phosphomethylpyrimidine kinase BS615_00985 PF02581 Thiamine monophosphate synthase BS615_00985 PF03070 TENA/THI-4/PQQC family BS615_00995 PF07690 Major Facilitator Superfamily BS615_01000 PF00436 Single-strand binding protein family BS615_01010 PF03591 AzlC protein BS615_01020 PF00324 Amino acid permease BS615_01025 PF00155 Aminotransferase class I and II BS615_01025 PF00392 Bacterial regulatory proteins, gntR family BS615_01030 PF00202 Aminotransferase class-III BS615_01035 PF00171 Aldehyde dehydrogenase family BS615_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_01045 PF00857 Isochorismatase family BS615_01050 PF05726 Pirin C-terminal cupin domain BS615_01050 PF02678 Pirin BS615_01075 PF07690 Major Facilitator Superfamily BS615_01080 PF03466 LysR substrate binding domain BS615_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_01100 PF00248 Aldo/keto reductase family BS615_01105 PF02311 AraC-like ligand binding domain BS615_01105 PF12833 Helix-turn-helix domain BS615_01135 PF01638 HxlR-like helix-turn-helix BS615_01140 PF02525 Flavodoxin-like fold BS615_01160 PF02705 K+ potassium transporter BS615_01185 PF00230 Major intrinsic protein BS615_01200 PF00977 Histidine biosynthesis protein BS615_01205 PF01636 Phosphotransferase enzyme family BS615_01220 PF03992 Antibiotic biosynthesis monooxygenase BS615_01235 PF00977 Histidine biosynthesis protein BS615_01250 PF00117 Glutamine amidotransferase class-I BS615_01255 PF00475 Imidazoleglycerol-phosphate dehydratase BS615_01275 PF00583 Acetyltransferase (GNAT) family BS615_01280 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BS615_01280 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BS615_01285 PF00512 His Kinase A (phospho-acceptor) domain BS615_01285 PF00672 HAMP domain BS615_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_01290 PF00486 Transcriptional regulatory protein, C terminal BS615_01290 PF00072 Response regulator receiver domain BS615_01295 PF00575 S1 RNA binding domain BS615_01295 PF09371 Tex-like protein N-terminal domain BS615_01295 PF17674 HHH domain BS615_01295 PF16921 Tex protein YqgF-like domain BS615_01300 PF01740 STAS domain BS615_01300 PF00916 Sulfate permease family BS615_01305 PF00106 short chain dehydrogenase BS615_01310 PF01053 Cys/Met metabolism PLP-dependent enzyme BS615_01315 PF12848 ABC transporter BS615_01315 PF00005 ABC transporter BS615_01340 PF04191 Phospholipid methyltransferase BS615_01355 PF00529 HlyD membrane-fusion protein of T1SS BS615_01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_01360 PF00873 AcrB/AcrD/AcrF family BS615_01365 PF01545 Cation efflux family BS615_01395 PF00324 Amino acid permease BS615_01410 PF00749 tRNA synthetases class I (E and Q), catalytic domain BS615_01425 PF01795 MraW methylase family BS615_01435 PF00905 Penicillin binding protein transpeptidase domain BS615_01435 PF03717 Penicillin-binding Protein dimerisation domain BS615_01440 PF02875 Mur ligase family, glutamate ligase domain BS615_01440 PF01225 Mur ligase family, catalytic domain BS615_01440 PF08245 Mur ligase middle domain BS615_01445 PF02875 Mur ligase family, glutamate ligase domain BS615_01445 PF08245 Mur ligase middle domain BS615_01445 PF01225 Mur ligase family, catalytic domain BS615_01450 PF00953 Glycosyl transferase family 4 BS615_01460 PF13847 Methyltransferase domain BS615_01465 PF17092 Penicillin-binding protein OB-like domain BS615_01465 PF00912 Transglycosylase BS615_01465 PF00905 Penicillin binding protein transpeptidase domain BS615_01490 PF07660 Secretin and TonB N terminus short domain BS615_01490 PF11741 AMIN domain BS615_01490 PF03958 Bacterial type II/III secretion system short domain BS615_01490 PF00263 Bacterial type II and III secretion system protein BS615_01495 PF01202 Shikimate kinase BS615_01500 PF01761 3-dehydroquinate synthase BS615_01510 PF01645 Conserved region in glutamate synthase BS615_01510 PF04898 Glutamate synthase central domain BS615_01510 PF00310 Glutamine amidotransferases class-II BS615_01510 PF01493 GXGXG motif BS615_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_01515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BS615_01525 PF04011 LemA family BS615_01530 PF04536 TPM domain BS615_01550 PF00114 Pilin (bacterial filament) BS615_01550 PF07963 Prokaryotic N-terminal methylation motif BS615_01555 PF15864 Protein glycosylation ligase BS615_01555 PF11846 Virulence factor membrane-bound polymerase, C-terminal BS615_01555 PF04932 O-Antigen ligase BS615_01560 PF00210 Ferritin-like domain BS615_01565 PF04324 BFD-like [2Fe-2S] binding domain BS615_01570 PF01042 Endoribonuclease L-PSP BS615_01575 PF13291 ACT domain BS615_01575 PF02824 TGS domain BS615_01575 PF04607 Region found in RelA / SpoT proteins BS615_01580 PF01192 RNA polymerase Rpb6 BS615_01585 PF00625 Guanylate kinase BS615_01590 PF02401 LytB protein BS615_01630 PF00886 Ribosomal protein S16 BS615_01635 PF01782 RimM N-terminal domain BS615_01635 PF05239 PRC-barrel domain BS615_01640 PF01746 tRNA (Guanine-1)-methyltransferase BS615_01645 PF01245 Ribosomal protein L19 BS615_01650 PF00561 alpha/beta hydrolase fold BS615_01655 PF03280 Proteobacterial lipase chaperone protein BS615_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) BS615_01660 PF09157 Pseudouridine synthase II TruB, C-terminal BS615_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain BS615_01665 PF01925 Sulfite exporter TauE/SafE BS615_01675 PF00892 EamA-like transporter family BS615_01680 PF00892 EamA-like transporter family BS615_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BS615_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BS615_01690 PF02913 FAD linked oxidases, C-terminal domain BS615_01690 PF01565 FAD binding domain BS615_01700 PF03992 Antibiotic biosynthesis monooxygenase BS615_01705 PF02525 Flavodoxin-like fold BS615_01715 PF07690 Major Facilitator Superfamily BS615_01720 PF12805 FUSC-like inner membrane protein yccS BS615_01725 PF00080 Copper/zinc superoxide dismutase (SODC) BS615_01730 PF01594 AI-2E family transporter BS615_01735 PF13614 AAA domain BS615_01765 PF00324 Amino acid permease BS615_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BS615_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BS615_01775 PF00202 Aminotransferase class-III BS615_01780 PF04958 Arginine N-succinyltransferase beta subunit BS615_01785 PF00171 Aldehyde dehydrogenase family BS615_01790 PF04996 Succinylarginine dihydrolase BS615_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BS615_01825 PF03466 LysR substrate binding domain BS615_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_01830 PF00892 EamA-like transporter family BS615_01840 PF02092 Glycyl-tRNA synthetase beta subunit BS615_01840 PF05746 DALR anticodon binding domain BS615_01845 PF02091 Glycyl-tRNA synthetase alpha subunit BS615_01870 PF00571 CBS domain BS615_01875 PF04024 PspC domain BS615_01885 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like BS615_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_01895 PF08501 Shikimate dehydrogenase substrate binding domain BS615_01895 PF01488 Shikimate / quinate 5-dehydrogenase BS615_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BS615_01900 PF01218 Coproporphyrinogen III oxidase BS615_01905 PF00925 GTP cyclohydrolase II BS615_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BS615_01910 PF02780 Transketolase, C-terminal domain BS615_01910 PF02779 Transketolase, pyrimidine binding domain BS615_01915 PF00459 Inositol monophosphatase family BS615_01920 PF00271 Helicase conserved C-terminal domain BS615_01920 PF03880 DbpA RNA binding domain BS615_01920 PF00270 DEAD/DEAH box helicase BS615_01920 PF12343 Cold shock protein DEAD box A BS615_01930 PF00005 ABC transporter BS615_01935 PF02405 Permease MlaE BS615_01945 PF05494 MlaC protein BS615_01955 PF01544 CorA-like Mg2+ transporter protein BS615_01960 PF03641 Possible lysine decarboxylase BS615_01965 PF00293 NUDIX domain BS615_01970 PF00156 Phosphoribosyl transferase domain BS615_01975 PF00271 Helicase conserved C-terminal domain BS615_01975 PF00270 DEAD/DEAH box helicase BS615_01975 PF17191 RecG wedge domain BS615_01990 PF01553 Acyltransferase BS615_02000 PF00375 Sodium:dicarboxylate symporter family BS615_02010 PF01926 50S ribosome-binding GTPase BS615_02015 PF02082 Transcriptional regulator BS615_02020 PF00970 Oxidoreductase FAD-binding domain BS615_02020 PF00175 Oxidoreductase NAD-binding domain BS615_02020 PF00042 Globin BS615_02025 PF05872 Bacterial protein of unknown function (DUF853) BS615_02030 PF01053 Cys/Met metabolism PLP-dependent enzyme BS615_02035 PF00117 Glutamine amidotransferase class-I BS615_02040 PF00338 Ribosomal protein S10p/S20e BS615_02045 PF00297 Ribosomal protein L3 BS615_02050 PF00573 Ribosomal protein L4/L1 family BS615_02055 PF00276 Ribosomal protein L23 BS615_02060 PF00181 Ribosomal Proteins L2, RNA binding domain BS615_02060 PF03947 Ribosomal Proteins L2, C-terminal domain BS615_02065 PF00203 Ribosomal protein S19 BS615_02070 PF00237 Ribosomal protein L22p/L17e BS615_02075 PF00189 Ribosomal protein S3, C-terminal domain BS615_02075 PF07650 KH domain BS615_02080 PF00252 Ribosomal protein L16p/L10e BS615_02085 PF00831 Ribosomal L29 protein BS615_02090 PF00366 Ribosomal protein S17 BS615_02095 PF00238 Ribosomal protein L14p/L23e BS615_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BS615_02100 PF00467 KOW motif BS615_02105 PF00673 ribosomal L5P family C-terminus BS615_02105 PF00281 Ribosomal protein L5 BS615_02110 PF00253 Ribosomal protein S14p/S29e BS615_02115 PF00410 Ribosomal protein S8 BS615_02120 PF00347 Ribosomal protein L6 BS615_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BS615_02130 PF00333 Ribosomal protein S5, N-terminal domain BS615_02130 PF03719 Ribosomal protein S5, C-terminal domain BS615_02135 PF00327 Ribosomal protein L30p/L7e BS615_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BS615_02145 PF00344 SecY translocase BS615_02150 PF00444 Ribosomal protein L36 BS615_02155 PF00416 Ribosomal protein S13/S18 BS615_02160 PF00411 Ribosomal protein S11 BS615_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain BS615_02165 PF01479 S4 domain BS615_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BS615_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain BS615_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BS615_02175 PF01196 Ribosomal protein L17 BS615_02180 PF00743 Flavin-binding monooxygenase-like BS615_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_02185 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_02190 PF03937 Flavinator of succinate dehydrogenase BS615_02220 PF09526 Probable metal-binding protein (DUF2387) BS615_02225 PF01432 Peptidase family M3 BS615_02230 PF00773 RNB domain BS615_02230 PF08206 Ribonuclease B OB domain BS615_02230 PF08461 Ribonuclease R winged-helix domain BS615_02230 PF17876 Cold shock domain BS615_02230 PF00575 S1 RNA binding domain BS615_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family BS615_02280 PF12833 Helix-turn-helix domain BS615_02285 PF00892 EamA-like transporter family BS615_02290 PF03631 Virulence factor BrkB BS615_02295 PF03358 NADPH-dependent FMN reductase BS615_02320 PF02130 Uncharacterized protein family UPF0054 BS615_02325 PF02562 PhoH-like protein BS615_02330 PF04055 Radical SAM superfamily BS615_02330 PF01938 TRAM domain BS615_02330 PF00919 Uncharacterized protein family UPF0004 BS615_02335 PF01464 Transglycosylase SLT domain BS615_02335 PF01551 Peptidase family M23 BS615_02335 PF10145 Phage-related minor tail protein BS615_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain BS615_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BS615_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BS615_02370 PF01066 CDP-alcohol phosphatidyltransferase BS615_02415 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_02420 PF17932 Tetracyclin repressor-like, C-terminal domain BS615_02420 PF00440 Bacterial regulatory proteins, tetR family BS615_02435 PF01039 Carboxyl transferase domain BS615_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_02440 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_02450 PF00289 Biotin carboxylase, N-terminal domain BS615_02450 PF02785 Biotin carboxylase C-terminal domain BS615_02450 PF00364 Biotin-requiring enzyme BS615_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BS615_02460 PF04386 Stringent starvation protein B BS615_02465 PF13417 Glutathione S-transferase, N-terminal domain BS615_02465 PF00043 Glutathione S-transferase, C-terminal domain BS615_02470 PF00380 Ribosomal protein S9/S16 BS615_02475 PF00572 Ribosomal protein L13 BS615_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BS615_02485 PF00398 Ribosomal RNA adenine dimethylase BS615_02490 PF00149 Calcineurin-like phosphoesterase BS615_02510 PF01926 50S ribosome-binding GTPase BS615_02510 PF16360 GTP-binding GTPase Middle Region BS615_02510 PF13167 GTP-binding GTPase N-terminal BS615_02520 PF13091 PLD-like domain BS615_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence BS615_02525 PF00149 Calcineurin-like phosphoesterase BS615_02530 PF01389 OmpA-like transmembrane domain BS615_02530 PF00691 OmpA family BS615_02535 PF17152 Periplasmic sensor domain BS615_02535 PF00990 Diguanylate cyclase, GGDEF domain BS615_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BS615_02580 PF04273 Putative phosphatase (DUF442) BS615_02580 PF00753 Metallo-beta-lactamase superfamily BS615_02585 PF00561 alpha/beta hydrolase fold BS615_02590 PF00085 Thioredoxin BS615_02595 PF03061 Thioesterase superfamily BS615_02605 PF04461 Protein of unknown function (DUF520) BS615_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BS615_02615 PF01266 FAD dependent oxidoreductase BS615_02625 PF03795 YCII-related domain BS615_02630 PF04279 Intracellular septation protein A BS615_02635 PF02811 PHP domain BS615_02640 PF01062 Bestrophin, RFP-TM, chloride channel BS615_02645 PF04002 RadC-like JAB domain BS615_02650 PF02441 Flavoprotein BS615_02650 PF04127 DNA / pantothenate metabolism flavoprotein BS615_02655 PF02355 Protein export membrane protein BS615_02655 PF07549 SecD/SecF GG Motif BS615_02665 PF02699 Preprotein translocase subunit BS615_02670 PF01702 Queuine tRNA-ribosyltransferase BS615_02685 PF02547 Queuosine biosynthesis protein BS615_02710 PF07689 KaiB domain BS615_02710 PF00512 His Kinase A (phospho-acceptor) domain BS615_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_02715 PF08335 GlnD PII-uridylyltransferase BS615_02715 PF03710 Glutamate-ammonia ligase adenylyltransferase BS615_02720 PF01063 Amino-transferase class IV BS615_02735 PF01522 Polysaccharide deacetylase BS615_02740 PF00535 Glycosyl transferase family 2 BS615_02745 PF00534 Glycosyl transferases group 1 BS615_02745 PF13439 Glycosyltransferase Family 4 BS615_02770 PF11380 Stealth protein CR2, conserved region 2 BS615_02770 PF17101 Stealth protein CR1, conserved region 1 BS615_02770 PF17102 Stealth protein CR3, conserved region 3 BS615_02775 PF02938 GAD domain BS615_02775 PF01336 OB-fold nucleic acid binding domain BS615_02775 PF00152 tRNA synthetases class II (D, K and N) BS615_02785 PF07715 TonB-dependent Receptor Plug Domain BS615_02785 PF00593 TonB dependent receptor BS615_02805 PF06146 Phosphate-starvation-inducible E BS615_02810 PF02798 Glutathione S-transferase, N-terminal domain BS615_02810 PF00043 Glutathione S-transferase, C-terminal domain BS615_02815 PF03466 LysR substrate binding domain BS615_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_02820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_02820 PF12806 Acetyl-CoA dehydrogenase C-terminal like BS615_02820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_02820 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_02835 PF00672 HAMP domain BS615_02835 PF00512 His Kinase A (phospho-acceptor) domain BS615_02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_02840 PF00486 Transcriptional regulatory protein, C terminal BS615_02840 PF00072 Response regulator receiver domain BS615_02845 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BS615_02865 PF01923 Cobalamin adenosyltransferase BS615_02870 PF07715 TonB-dependent Receptor Plug Domain BS615_02870 PF00593 TonB dependent receptor BS615_02875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BS615_02880 PF00291 Pyridoxal-phosphate dependent enzyme BS615_02905 PF00290 Tryptophan synthase alpha chain BS615_02910 PF01039 Carboxyl transferase domain BS615_02915 PF02875 Mur ligase family, glutamate ligase domain BS615_02915 PF08245 Mur ligase middle domain BS615_02930 PF00753 Metallo-beta-lactamase superfamily BS615_02935 PF00578 AhpC/TSA family BS615_02935 PF10417 C-terminal domain of 1-Cys peroxiredoxin BS615_02940 PF02810 SEC-C motif BS615_02940 PF07517 SecA DEAD-like domain BS615_02940 PF01043 SecA preprotein cross-linking domain BS615_02940 PF07516 SecA Wing and Scaffold domain BS615_02950 PF00083 Sugar (and other) transporter BS615_02950 PF07690 Major Facilitator Superfamily BS615_02955 PF03006 Haemolysin-III related BS615_02980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BS615_02980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BS615_02980 PF00378 Enoyl-CoA hydratase/isomerase BS615_02985 PF00108 Thiolase, N-terminal domain BS615_02985 PF02803 Thiolase, C-terminal domain BS615_02990 PF12833 Helix-turn-helix domain BS615_02990 PF02311 AraC-like ligand binding domain BS615_02995 PF02515 CoA-transferase family III BS615_03000 PF04966 Carbohydrate-selective porin, OprB family BS615_03005 PF01011 PQQ enzyme repeat BS615_03010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BS615_03010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BS615_03020 PF00893 Small Multidrug Resistance protein BS615_03030 PF02803 Thiolase, C-terminal domain BS615_03030 PF00108 Thiolase, N-terminal domain BS615_03040 PF00691 OmpA family BS615_03040 PF13505 Outer membrane protein beta-barrel domain BS615_03055 PF01139 tRNA-splicing ligase RtcB BS615_03060 PF00324 Amino acid permease BS615_03065 PF05175 Methyltransferase small domain BS615_03065 PF08468 Methyltransferase small domain N-terminal BS615_03070 PF00860 Permease family BS615_03080 PF01741 Large-conductance mechanosensitive channel, MscL BS615_03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BS615_03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BS615_03095 PF06827 Zinc finger found in FPG and IleRS BS615_03100 PF02245 Methylpurine-DNA glycosylase (MPG) BS615_03125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BS615_03130 PF03547 Membrane transport protein BS615_03140 PF13098 Thioredoxin-like domain BS615_03140 PF10411 Disulfide bond isomerase protein N-terminus BS615_03145 PF01571 Aminomethyltransferase folate-binding domain BS615_03155 PF04343 Protein of unknown function, DUF488 BS615_03160 PF03831 PhnA domain BS615_03160 PF08274 PhnA Zinc-Ribbon BS615_03165 PF07411 Domain of unknown function (DUF1508) BS615_03170 PF04073 Aminoacyl-tRNA editing domain BS615_03170 PF03129 Anticodon binding domain BS615_03170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BS615_03175 PF00873 AcrB/AcrD/AcrF family BS615_03190 PF00072 Response regulator receiver domain BS615_03195 PF00072 Response regulator receiver domain BS615_03200 PF01584 CheW-like domain BS615_03205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BS615_03205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BS615_03210 PF01584 CheW-like domain BS615_03210 PF01627 Hpt domain BS615_03210 PF00072 Response regulator receiver domain BS615_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_03220 PF01546 Peptidase family M20/M25/M40 BS615_03220 PF07687 Peptidase dimerisation domain BS615_03225 PF08085 Entericidin EcnA/B family BS615_03235 PF04304 Protein of unknown function (DUF454) BS615_03240 PF03734 L,D-transpeptidase catalytic domain BS615_03240 PF17969 L,D-transpeptidase C-terminal domain BS615_03280 PF00175 Oxidoreductase NAD-binding domain BS615_03280 PF00667 FAD binding domain BS615_03280 PF00258 Flavodoxin BS615_03290 PF12805 FUSC-like inner membrane protein yccS BS615_03295 PF07690 Major Facilitator Superfamily BS615_03300 PF00881 Nitroreductase family BS615_03310 PF01235 Sodium:alanine symporter family BS615_03315 PF01734 Patatin-like phospholipase BS615_03320 PF00291 Pyridoxal-phosphate dependent enzyme BS615_03320 PF13291 ACT domain BS615_03325 PF05992 SbmA/BacA-like family BS615_03355 PF02934 GatB/GatE catalytic domain BS615_03355 PF02637 GatB domain BS615_03360 PF01425 Amidase BS615_03365 PF02686 Glu-tRNAGln amidotransferase C subunit BS615_03375 PF04085 rod shape-determining protein MreC BS615_03380 PF04093 rod shape-determining protein MreD BS615_03385 PF02545 Maf-like protein BS615_03390 PF00575 S1 RNA binding domain BS615_03390 PF10150 Ribonuclease E/G family BS615_03400 PF06974 Protein of unknown function (DUF1298) BS615_03400 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BS615_03405 PF01507 Phosphoadenosine phosphosulfate reductase family BS615_03420 PF02525 Flavodoxin-like fold BS615_03440 PF02673 Bacitracin resistance protein BacA BS615_03445 PF06719 AraC-type transcriptional regulator N-terminus BS615_03445 PF12833 Helix-turn-helix domain BS615_03450 PF08990 Erythronolide synthase docking BS615_03450 PF00550 Phosphopantetheine attachment site BS615_03450 PF09277 Erythronolide synthase, docking BS615_03450 PF00698 Acyl transferase domain BS615_03450 PF16197 Ketoacyl-synthetase C-terminal extension BS615_03450 PF00109 Beta-ketoacyl synthase, N-terminal domain BS615_03450 PF08240 Alcohol dehydrogenase GroES-like domain BS615_03450 PF14765 Polyketide synthase dehydratase BS615_03450 PF02801 Beta-ketoacyl synthase, C-terminal domain BS615_03450 PF08659 KR domain BS615_03455 PF01965 DJ-1/PfpI family BS615_03465 PF00324 Amino acid permease BS615_03470 PF04303 PrpF protein BS615_03475 PF00348 Polyprenyl synthetase BS615_03480 PF04237 YjbR BS615_03485 PF01145 SPFH domain / Band 7 family BS615_03495 PF01734 Patatin-like phospholipase BS615_03515 PF08019 Phosphoethanolamine transferase EptA/EptB BS615_03515 PF00884 Sulfatase BS615_03520 PF00486 Transcriptional regulatory protein, C terminal BS615_03520 PF00072 Response regulator receiver domain BS615_03525 PF00512 His Kinase A (phospho-acceptor) domain BS615_03525 PF08521 Two-component sensor kinase N-terminal BS615_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_03535 PF00909 Ammonium Transporter Family BS615_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_03545 PF03466 LysR substrate binding domain BS615_03565 PF10458 Valyl tRNA synthetase tRNA binding arm BS615_03565 PF08264 Anticodon-binding domain of tRNA BS615_03565 PF00133 tRNA synthetases class I (I, L, M and V) BS615_03585 PF01906 Putative heavy-metal-binding BS615_03590 PF01906 Putative heavy-metal-binding BS615_03595 PF02321 Outer membrane efflux protein BS615_03600 PF00873 AcrB/AcrD/AcrF family BS615_03605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_03605 PF00529 HlyD membrane-fusion protein of T1SS BS615_03610 PF01569 PAP2 superfamily BS615_03620 PF00348 Polyprenyl synthetase BS615_03630 PF00829 Ribosomal prokaryotic L21 protein BS615_03635 PF01016 Ribosomal L27 protein BS615_03640 PF03548 Outer membrane lipoprotein carrier protein LolA BS615_03650 PF02403 Seryl-tRNA synthetase N-terminal domain BS615_03650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BS615_03655 PF14824 Sirohaem biosynthesis protein central BS615_03655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BS615_03655 PF10414 Sirohaem synthase dimerisation region BS615_03660 PF00588 SpoU rRNA Methylase family BS615_03665 PF01638 HxlR-like helix-turn-helix BS615_03670 PF03358 NADPH-dependent FMN reductase BS615_03675 PF13520 Amino acid permease BS615_03680 PF00465 Iron-containing alcohol dehydrogenase BS615_03690 PF03099 Biotin/lipoate A/B protein ligase family BS615_03695 PF04359 Protein of unknown function (DUF493) BS615_03700 PF00140 Sigma-70 factor, region 1.2 BS615_03700 PF04539 Sigma-70 region 3 BS615_03700 PF04546 Sigma-70, non-essential region BS615_03700 PF04542 Sigma-70 region 2 BS615_03700 PF03979 Sigma-70 factor, region 1.1 BS615_03700 PF04545 Sigma-70, region 4 BS615_03730 PF00285 Citrate synthase, C-terminal domain BS615_03735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BS615_03740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BS615_03745 PF00890 FAD binding domain BS615_03745 PF02910 Fumarate reductase flavoprotein C-term BS615_03750 PF13085 2Fe-2S iron-sulfur cluster binding domain BS615_03760 PF16870 2-oxoglutarate dehydrogenase C-terminal BS615_03760 PF16078 2-oxoglutarate dehydrogenase N-terminus BS615_03760 PF00676 Dehydrogenase E1 component BS615_03760 PF02779 Transketolase, pyrimidine binding domain BS615_03765 PF00364 Biotin-requiring enzyme BS615_03765 PF02817 e3 binding domain BS615_03765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BS615_03770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BS615_03770 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_03775 PF08442 ATP-grasp domain BS615_03775 PF00549 CoA-ligase BS615_03780 PF02629 CoA binding domain BS615_03780 PF00549 CoA-ligase BS615_03785 PF00579 tRNA synthetases class I (W and Y) BS615_03790 PF05661 Protein of unknown function (DUF808) BS615_03795 PF04228 Putative neutral zinc metallopeptidase BS615_03800 PF00999 Sodium/hydrogen exchanger family BS615_03830 PF09587 Bacterial capsule synthesis protein PGA_cap BS615_03840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BS615_03845 PF00582 Universal stress protein family BS615_03850 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_03855 PF03449 Transcription elongation factor, N-terminal BS615_03855 PF01272 Transcription elongation factor, GreA/GreB, C-term BS615_03860 PF02142 MGS-like domain BS615_03860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BS615_03860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BS615_03865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BS615_03865 PF00117 Glutamine amidotransferase class-I BS615_03885 PF01985 CRS1 / YhbY (CRM) domain BS615_03890 PF01728 FtsJ-like methyltransferase BS615_03895 PF06480 FtsH Extracellular BS615_03895 PF00004 ATPase family associated with various cellular activities (AAA) BS615_03895 PF17862 AAA+ lid domain BS615_03895 PF01434 Peptidase family M41 BS615_03900 PF00809 Pterin binding enzyme BS615_03920 PF16655 PhoD-like phosphatase, N-terminal domain BS615_03920 PF09423 PhoD-like phosphatase BS615_03935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BS615_03935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BS615_03950 PF00083 Sugar (and other) transporter BS615_03955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BS615_03955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BS615_03960 PF01266 FAD dependent oxidoreductase BS615_03960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BS615_03965 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BS615_03965 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BS615_03970 PF00781 Diacylglycerol kinase catalytic domain BS615_03975 PF00149 Calcineurin-like phosphoesterase BS615_03985 PF00166 Chaperonin 10 Kd subunit BS615_03990 PF00118 TCP-1/cpn60 chaperonin family BS615_03995 PF01219 Prokaryotic diacylglycerol kinase BS615_04000 PF00753 Metallo-beta-lactamase superfamily BS615_04005 PF03009 Glycerophosphoryl diester phosphodiesterase family BS615_04010 PF00873 AcrB/AcrD/AcrF family BS615_04020 PF01435 Peptidase family M48 BS615_04025 PF01464 Transglycosylase SLT domain BS615_04035 PF01171 PP-loop family BS615_04045 PF01464 Transglycosylase SLT domain BS615_04045 PF00497 Bacterial extracellular solute-binding proteins, family 3 BS615_04050 PF03449 Transcription elongation factor, N-terminal BS615_04050 PF01272 Transcription elongation factor, GreA/GreB, C-term BS615_04065 PF00550 Phosphopantetheine attachment site BS615_04065 PF00975 Thioesterase domain BS615_04065 PF00501 AMP-binding enzyme BS615_04065 PF00668 Condensation domain BS615_04065 PF13193 AMP-binding enzyme C-terminal domain BS615_04095 PF00881 Nitroreductase family BS615_04110 PF02595 Glycerate kinase family BS615_04115 PF00384 Molybdopterin oxidoreductase BS615_04120 PF02634 FdhD/NarQ family BS615_04125 PF06803 Protein of unknown function (DUF1232) BS615_04130 PF11890 Domain of unknown function (DUF3410) BS615_04130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BS615_04130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BS615_04135 PF00152 tRNA synthetases class II (D, K and N) BS615_04145 PF18073 Rubredoxin metal binding domain BS615_04150 PF00324 Amino acid permease BS615_04160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BS615_04160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BS615_04165 PF01678 Diaminopimelate epimerase BS615_04170 PF01810 LysE type translocator BS615_04175 PF00589 Phage integrase family BS615_04175 PF02899 Phage integrase, N-terminal SAM-like domain BS615_04180 PF01012 Electron transfer flavoprotein domain BS615_04185 PF00766 Electron transfer flavoprotein FAD-binding domain BS615_04185 PF01012 Electron transfer flavoprotein domain BS615_04190 PF00521 DNA gyrase/topoisomerase IV, subunit A BS615_04190 PF03989 DNA gyrase C-terminal domain, beta-propeller BS615_04205 PF00535 Glycosyl transferase family 2 BS615_04225 PF13533 Biotin-lipoyl like BS615_04235 PF00266 Aminotransferase class-V BS615_04245 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BS615_04255 PF02687 FtsX-like permease family BS615_04255 PF12704 MacB-like periplasmic core domain BS615_04260 PF00005 ABC transporter BS615_04265 PF13567 Domain of unknown function (DUF4131) BS615_04265 PF03772 Competence protein BS615_04265 PF00753 Metallo-beta-lactamase superfamily BS615_04275 PF06965 Na+/H+ antiporter 1 BS615_04275 PF01343 Peptidase family S49 BS615_04280 PF12697 Alpha/beta hydrolase family BS615_04285 PF00551 Formyl transferase BS615_04290 PF02769 AIR synthase related protein, C-terminal domain BS615_04290 PF00586 AIR synthase related protein, N-terminal domain BS615_04295 PF01594 AI-2E family transporter BS615_04300 PF11638 DnaA N-terminal domain BS615_04300 PF08299 Bacterial dnaA protein helix-turn-helix BS615_04300 PF00308 Bacterial dnaA protein BS615_04330 PF08032 RNA 2'-O ribose methyltransferase substrate binding BS615_04330 PF00588 SpoU rRNA Methylase family BS615_04335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BS615_04345 PF00691 OmpA family BS615_04350 PF04052 TolB amino-terminal domain BS615_04350 PF07676 WD40-like Beta Propeller Repeat BS615_04360 PF02472 Biopolymer transport protein ExbD/TolR BS615_04365 PF01618 MotA/TolQ/ExbB proton channel family BS615_04370 PF03061 Thioesterase superfamily BS615_04375 PF01546 Peptidase family M20/M25/M40 BS615_04375 PF07687 Peptidase dimerisation domain BS615_04380 PF17864 RuvB AAA lid domain BS615_04380 PF05491 RuvB C-terminal winged helix domain BS615_04380 PF05496 Holliday junction DNA helicase RuvB P-loop domain BS615_04385 PF07499 RuvA, C-terminal domain BS615_04385 PF01330 RuvA N terminal domain BS615_04390 PF01966 HD domain BS615_04395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BS615_04395 PF02769 AIR synthase related protein, C-terminal domain BS615_04395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BS615_04400 PF07690 Major Facilitator Superfamily BS615_04410 PF01784 NIF3 (NGG1p interacting factor 3) BS615_04415 PF00378 Enoyl-CoA hydratase/isomerase BS615_04420 PF01467 Cytidylyltransferase-like BS615_04420 PF00293 NUDIX domain BS615_04430 PF00578 AhpC/TSA family BS615_04445 PF06508 Queuosine biosynthesis protein QueC BS615_04455 PF14602 Hexapeptide repeat of succinyl-transferase BS615_04455 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BS615_04455 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_04465 PF03466 LysR substrate binding domain BS615_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_04470 PF00005 ABC transporter BS615_04470 PF12857 TOBE-like domain BS615_04475 PF00528 Binding-protein-dependent transport system inner membrane component BS615_04480 PF00528 Binding-protein-dependent transport system inner membrane component BS615_04495 PF01063 Amino-transferase class IV BS615_04500 PF02618 YceG-like family BS615_04505 PF02223 Thymidylate kinase BS615_04515 PF02910 Fumarate reductase flavoprotein C-term BS615_04515 PF00890 FAD binding domain BS615_04520 PF13180 PDZ domain BS615_04530 PF06421 GTP-binding protein LepA C-terminus BS615_04530 PF00679 Elongation factor G C-terminus BS615_04530 PF00009 Elongation factor Tu GTP binding domain BS615_04530 PF03144 Elongation factor Tu domain 2 BS615_04535 PF10502 Signal peptidase, peptidase S26 BS615_04545 PF14622 Ribonuclease-III-like BS615_04545 PF00035 Double-stranded RNA binding motif BS615_04550 PF01926 50S ribosome-binding GTPase BS615_04550 PF07650 KH domain BS615_04560 PF11967 Recombination protein O N terminal BS615_04560 PF02565 Recombination protein O C terminal BS615_04565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BS615_04570 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BS615_04575 PF00106 short chain dehydrogenase BS615_04610 PF00990 Diguanylate cyclase, GGDEF domain BS615_04610 PF17151 Periplasmic sensor domain BS615_04620 PF00271 Helicase conserved C-terminal domain BS615_04620 PF17757 UvrB interaction domain BS615_04620 PF04851 Type III restriction enzyme, res subunit BS615_04620 PF12344 Ultra-violet resistance protein B BS615_04620 PF02151 UvrB/uvrC motif BS615_04635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BS615_04635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BS615_04650 PF01018 GTP1/OBG BS615_04650 PF01926 50S ribosome-binding GTPase BS615_04655 PF01472 PUA domain BS615_04655 PF00696 Amino acid kinase family BS615_04665 PF07759 Protein of unknown function (DUF1615) BS615_04670 PF01207 Dihydrouridine synthase (Dus) BS615_04675 PF03060 Nitronate monooxygenase BS615_04690 PF02350 UDP-N-acetylglucosamine 2-epimerase BS615_04720 PF00875 DNA photolyase BS615_04720 PF03441 FAD binding domain of DNA photolyase BS615_04725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BS615_04730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_04735 PF00768 D-alanyl-D-alanine carboxypeptidase BS615_04735 PF07943 Penicillin-binding protein 5, C-terminal domain BS615_04745 PF03971 Monomeric isocitrate dehydrogenase BS615_04750 PF00849 RNA pseudouridylate synthase BS615_04755 PF00180 Isocitrate/isopropylmalate dehydrogenase BS615_04770 PF06779 Uncharacterised MFS-type transporter YbfB BS615_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_04775 PF03466 LysR substrate binding domain BS615_04785 PF02567 Phenazine biosynthesis-like protein BS615_04790 PF05193 Peptidase M16 inactive domain BS615_04790 PF00675 Insulinase (Peptidase family M16) BS615_04815 PF02581 Thiamine monophosphate synthase BS615_04820 PF00202 Aminotransferase class-III BS615_04830 PF00849 RNA pseudouridylate synthase BS615_04835 PF18337 RapA N-terminal Tudor like domain BS615_04835 PF18339 RapA N-terminal Tudor like domain 1 BS615_04835 PF12137 RNA polymerase recycling family C-terminal BS615_04835 PF00176 SNF2 family N-terminal domain BS615_04835 PF00271 Helicase conserved C-terminal domain BS615_04845 PF00440 Bacterial regulatory proteins, tetR family BS615_04850 PF00175 Oxidoreductase NAD-binding domain BS615_04850 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_04850 PF00970 Oxidoreductase FAD-binding domain BS615_04855 PF00487 Fatty acid desaturase BS615_04875 PF17754 MftR C-terminal domain BS615_04875 PF00440 Bacterial regulatory proteins, tetR family BS615_04885 PF00202 Aminotransferase class-III BS615_04890 PF00282 Pyridoxal-dependent decarboxylase conserved domain BS615_04895 PF00171 Aldehyde dehydrogenase family BS615_04900 PF01037 Lrp/AsnC ligand binding domain BS615_04905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BS615_04905 PF00205 Thiamine pyrophosphate enzyme, central domain BS615_04905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BS615_04910 PF00324 Amino acid permease BS615_04915 PF12849 PBP superfamily domain BS615_04920 PF00528 Binding-protein-dependent transport system inner membrane component BS615_04925 PF00528 Binding-protein-dependent transport system inner membrane component BS615_04930 PF00005 ABC transporter BS615_04935 PF08496 Peptidase family S49 N-terminal BS615_04935 PF01343 Peptidase family S49 BS615_04950 PF00206 Lyase BS615_04950 PF08328 Adenylosuccinate lyase C-terminal BS615_04955 PF04356 Protein of unknown function (DUF489) BS615_04965 PF09297 NADH pyrophosphatase zinc ribbon domain BS615_04965 PF00293 NUDIX domain BS615_04970 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_04975 PF07943 Penicillin-binding protein 5, C-terminal domain BS615_04975 PF00768 D-alanyl-D-alanine carboxypeptidase BS615_04990 PF01975 Survival protein SurE BS615_04995 PF01551 Peptidase family M23 BS615_04995 PF01476 LysM domain BS615_05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_05000 PF03466 LysR substrate binding domain BS615_05005 PF13654 AAA domain BS615_05005 PF05362 Lon protease (S16) C-terminal proteolytic domain BS615_05010 PF07690 Major Facilitator Superfamily BS615_05015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BS615_05020 PF13593 SBF-like CPA transporter family (DUF4137) BS615_05025 PF01197 Ribosomal protein L31 BS615_05040 PF04055 Radical SAM superfamily BS615_05045 PF08207 Elongation factor P (EF-P) KOW-like domain BS615_05045 PF09285 Elongation factor P, C-terminal BS615_05045 PF01132 Elongation factor P (EF-P) OB domain BS615_05050 PF13722 5TM C-terminal transporter carbon starvation CstA BS615_05050 PF02554 Carbon starvation protein CstA BS615_05055 PF04328 Selenoprotein, putative BS615_05095 PF06018 CodY GAF-like domain BS615_05095 PF17853 GGDEF-like domain BS615_05095 PF13556 PucR C-terminal helix-turn-helix domain BS615_05110 PF00171 Aldehyde dehydrogenase family BS615_05115 PF00324 Amino acid permease BS615_05120 PF03466 LysR substrate binding domain BS615_05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_05125 PF02028 BCCT, betaine/carnitine/choline family transporter BS615_05130 PF02028 BCCT, betaine/carnitine/choline family transporter BS615_05135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BS615_05135 PF00355 Rieske [2Fe-2S] domain BS615_05145 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_05145 PF18113 Rubredoxin binding C-terminal domain BS615_05150 PF01266 FAD dependent oxidoreductase BS615_05150 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BS615_05170 PF00892 EamA-like transporter family BS615_05180 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BS615_05185 PF00083 Sugar (and other) transporter BS615_05190 PF13378 Enolase C-terminal domain-like BS615_05190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BS615_05195 PF08240 Alcohol dehydrogenase GroES-like domain BS615_05195 PF00550 Phosphopantetheine attachment site BS615_05195 PF08659 KR domain BS615_05195 PF14765 Polyketide synthase dehydratase BS615_05195 PF00109 Beta-ketoacyl synthase, N-terminal domain BS615_05195 PF16197 Ketoacyl-synthetase C-terminal extension BS615_05195 PF00698 Acyl transferase domain BS615_05195 PF09277 Erythronolide synthase, docking BS615_05195 PF08990 Erythronolide synthase docking BS615_05195 PF02801 Beta-ketoacyl synthase, C-terminal domain BS615_05200 PF00440 Bacterial regulatory proteins, tetR family BS615_05220 PF17954 Quercetinase C-terminal cupin domain BS615_05220 PF02678 Pirin BS615_05230 PF08348 YheO-like PAS domain BS615_05230 PF13309 HTH domain BS615_05240 PF00501 AMP-binding enzyme BS615_05240 PF13193 AMP-binding enzyme C-terminal domain BS615_05240 PF00668 Condensation domain BS615_05240 PF00550 Phosphopantetheine attachment site BS615_05245 PF00501 AMP-binding enzyme BS615_05245 PF00550 Phosphopantetheine attachment site BS615_05245 PF00668 Condensation domain BS615_05245 PF00975 Thioesterase domain BS615_05245 PF13193 AMP-binding enzyme C-terminal domain BS615_05250 PF01032 FecCD transport family BS615_05255 PF01032 FecCD transport family BS615_05260 PF00005 ABC transporter BS615_05265 PF01497 Periplasmic binding protein BS615_05270 PF00593 TonB dependent receptor BS615_05270 PF07715 TonB-dependent Receptor Plug Domain BS615_05275 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BS615_05280 PF00550 Phosphopantetheine attachment site BS615_05280 PF00501 AMP-binding enzyme BS615_05280 PF00668 Condensation domain BS615_05285 PF13193 AMP-binding enzyme C-terminal domain BS615_05285 PF00501 AMP-binding enzyme BS615_05290 PF00550 Phosphopantetheine attachment site BS615_05290 PF00857 Isochorismatase family BS615_05295 PF00282 Pyridoxal-dependent decarboxylase conserved domain BS615_05305 PF00664 ABC transporter transmembrane region BS615_05305 PF00005 ABC transporter BS615_05315 PF00975 Thioesterase domain BS615_05325 PF00425 chorismate binding enzyme BS615_05335 PF01208 Uroporphyrinogen decarboxylase (URO-D) BS615_05340 PF05675 Protein of unknown function (DUF817) BS615_05355 PF00144 Beta-lactamase BS615_05375 PF01799 [2Fe-2S] binding domain BS615_05375 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_05380 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BS615_05380 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BS615_05395 PF00218 Indole-3-glycerol phosphate synthase BS615_05400 PF00591 Glycosyl transferase family, a/b domain BS615_05400 PF02885 Glycosyl transferase family, helical bundle domain BS615_05405 PF07715 TonB-dependent Receptor Plug Domain BS615_05405 PF00593 TonB dependent receptor BS615_05410 PF11838 ERAP1-like C-terminal domain BS615_05410 PF01433 Peptidase family M1 domain BS615_05415 PF00117 Glutamine amidotransferase class-I BS615_05425 PF00854 POT family BS615_05435 PF04345 Chorismate lyase BS615_05440 PF01040 UbiA prenyltransferase family BS615_05475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BS615_05475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BS615_05480 PF01784 NIF3 (NGG1p interacting factor 3) BS615_05485 PF13180 PDZ domain BS615_05490 PF12627 Probable RNA and SrmB- binding site of polymerase A BS615_05490 PF01743 Poly A polymerase head domain BS615_05495 PF00390 Malic enzyme, N-terminal domain BS615_05495 PF03949 Malic enzyme, NAD binding domain BS615_05495 PF01515 Phosphate acetyl/butaryl transferase BS615_05500 PF00563 EAL domain BS615_05500 PF03707 Bacterial signalling protein N terminal repeat BS615_05500 PF00990 Diguanylate cyclase, GGDEF domain BS615_05505 PF04452 RNA methyltransferase BS615_05510 PF02219 Methylenetetrahydrofolate reductase BS615_05515 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BS615_05515 PF05221 S-adenosyl-L-homocysteine hydrolase BS615_05530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_05530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_05530 PF09317 Domain of unknown function (DUF1974) BS615_05535 PF04055 Radical SAM superfamily BS615_05540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BS615_05540 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_05555 PF07690 Major Facilitator Superfamily BS615_05565 PF00557 Metallopeptidase family M24 BS615_05570 PF00318 Ribosomal protein S2 BS615_05575 PF00889 Elongation factor TS BS615_05585 PF12833 Helix-turn-helix domain BS615_05605 PF03330 Lytic transglycolase BS615_05605 PF05036 Sporulation related domain BS615_05610 PF13406 Transglycosylase SLT domain BS615_05615 PF01098 Cell cycle protein BS615_05625 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BS615_05625 PF14489 QueF-like protein BS615_05630 PF01061 ABC-2 type transporter BS615_05635 PF00005 ABC transporter BS615_05665 PF00464 Serine hydroxymethyltransferase BS615_05675 PF00873 AcrB/AcrD/AcrF family BS615_05680 PF13533 Biotin-lipoyl like BS615_05685 PF03466 LysR substrate binding domain BS615_05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_05690 PF00497 Bacterial extracellular solute-binding proteins, family 3 BS615_05695 PF00528 Binding-protein-dependent transport system inner membrane component BS615_05700 PF00528 Binding-protein-dependent transport system inner membrane component BS615_05705 PF00005 ABC transporter BS615_05710 PF00893 Small Multidrug Resistance protein BS615_05715 PF00037 4Fe-4S binding domain BS615_05725 PF00155 Aminotransferase class I and II BS615_05725 PF00392 Bacterial regulatory proteins, gntR family BS615_05730 PF02567 Phenazine biosynthesis-like protein BS615_05735 PF00175 Oxidoreductase NAD-binding domain BS615_05735 PF00970 Oxidoreductase FAD-binding domain BS615_05740 PF01980 tRNA-methyltransferase O BS615_05740 PF18389 TrmO C-terminal domain BS615_05750 PF00437 Type II/IV secretion system protein BS615_05760 PF00486 Transcriptional regulatory protein, C terminal BS615_05760 PF00072 Response regulator receiver domain BS615_05765 PF08521 Two-component sensor kinase N-terminal BS615_05765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_05765 PF00512 His Kinase A (phospho-acceptor) domain BS615_05775 PF00293 NUDIX domain BS615_05785 PF00912 Transglycosylase BS615_05785 PF00905 Penicillin binding protein transpeptidase domain BS615_05785 PF14814 Bifunctional transglycosylase second domain BS615_05790 PF01513 ATP-NAD kinase BS615_05795 PF07023 Protein of unknown function (DUF1315) BS615_05800 PF02885 Glycosyl transferase family, helical bundle domain BS615_05800 PF00591 Glycosyl transferase family, a/b domain BS615_05810 PF00375 Sodium:dicarboxylate symporter family BS615_05815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_05815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_05815 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_05820 PF00756 Putative esterase BS615_05825 PF01842 ACT domain BS615_05825 PF00800 Prephenate dehydratase BS615_05825 PF01817 Chorismate mutase type II BS615_05830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BS615_05840 PF01546 Peptidase family M20/M25/M40 BS615_05840 PF07687 Peptidase dimerisation domain BS615_05845 PF12706 Beta-lactamase superfamily domain BS615_05855 PF03883 Peroxide stress protein YaaA BS615_05865 PF05690 Thiazole biosynthesis protein ThiG BS615_05875 PF04241 Protein of unknown function (DUF423) BS615_05880 PF04542 Sigma-70 region 2 BS615_05880 PF04545 Sigma-70, region 4 BS615_05880 PF00140 Sigma-70 factor, region 1.2 BS615_05890 PF00313 'Cold-shock' DNA-binding domain BS615_05895 PF00270 DEAD/DEAH box helicase BS615_05895 PF00271 Helicase conserved C-terminal domain BS615_05905 PF00881 Nitroreductase family BS615_05910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BS615_05910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BS615_05930 PF01180 Dihydroorotate dehydrogenase BS615_05935 PF02674 Colicin V production protein BS615_05940 PF00156 Phosphoribosyl transferase domain BS615_05955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BS615_05955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BS615_05960 PF01435 Peptidase family M48 BS615_05965 PF09424 Yqey-like protein BS615_05970 PF01165 Ribosomal protein S21 BS615_05975 PF00814 Glycoprotease family BS615_05995 PF00069 Protein kinase domain BS615_06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_06020 PF03466 LysR substrate binding domain BS615_06025 PF00202 Aminotransferase class-III BS615_06030 PF00171 Aldehyde dehydrogenase family BS615_06035 PF00324 Amino acid permease BS615_06065 PF04076 Bacterial OB fold (BOF) protein BS615_06090 PF00561 alpha/beta hydrolase fold BS615_06095 PF03616 Sodium/glutamate symporter BS615_06105 PF00392 Bacterial regulatory proteins, gntR family BS615_06105 PF07729 FCD domain BS615_06155 PF00083 Sugar (and other) transporter BS615_06155 PF08946 Osmosensory transporter coiled coil BS615_06180 PF00155 Aminotransferase class I and II BS615_06185 PF02080 TrkA-C domain BS615_06185 PF06826 Predicted Permease Membrane Region BS615_06195 PF04403 Paraquat-inducible protein A BS615_06200 PF02470 MlaD protein BS615_06210 PF01177 Asp/Glu/Hydantoin racemase BS615_06215 PF00892 EamA-like transporter family BS615_06220 PF07995 Glucose / Sorbosone dehydrogenase BS615_06230 PF13610 DDE domain BS615_06245 PF01636 Phosphotransferase enzyme family BS615_06250 PF13610 DDE domain BS615_06255 PF13495 Phage integrase, N-terminal SAM-like domain BS615_06255 PF00589 Phage integrase family BS615_06265 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_06270 PF01909 Nucleotidyltransferase domain BS615_06270 PF13427 Domain of unknown function (DUF4111) BS615_06275 PF00893 Small Multidrug Resistance protein BS615_06280 PF00809 Pterin binding enzyme BS615_06295 PF07091 Ribosomal RNA methyltransferase (FmrO) BS615_06320 PF01636 Phosphotransferase enzyme family BS615_06330 PF03050 Transposase IS66 family BS615_06330 PF13007 Transposase C of IS166 homeodomain BS615_06330 PF13817 IS66 C-terminal element BS615_06330 PF13005 zinc-finger binding domain of transposase IS66 BS615_06350 PF01051 Initiator Replication protein BS615_06355 PF13610 DDE domain BS615_06375 PF00375 Sodium:dicarboxylate symporter family BS615_06385 PF16123 Hydroxyacylglutathione hydrolase C-terminus BS615_06385 PF00753 Metallo-beta-lactamase superfamily BS615_06390 PF00528 Binding-protein-dependent transport system inner membrane component BS615_06395 PF09383 NIL domain BS615_06395 PF00005 ABC transporter BS615_06400 PF03180 NLPA lipoprotein BS615_06405 PF02843 Phosphoribosylglycinamide synthetase, C domain BS615_06405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BS615_06405 PF02844 Phosphoribosylglycinamide synthetase, N domain BS615_06410 PF01808 AICARFT/IMPCHase bienzyme BS615_06410 PF02142 MGS-like domain BS615_06415 PF02954 Bacterial regulatory protein, Fis family BS615_06435 PF01134 Glucose inhibited division protein A BS615_06435 PF13932 GidA associated domain BS615_06445 PF14403 Circularly permuted ATP-grasp type 2 BS615_06455 PF01841 Transglutaminase-like superfamily BS615_06455 PF08379 Bacterial transglutaminase-like N-terminal region BS615_06465 PF01168 Alanine racemase, N-terminal domain BS615_06465 PF00842 Alanine racemase, C-terminal domain BS615_06470 PF03796 DnaB-like helicase C terminal domain BS615_06470 PF00772 DnaB-like helicase N terminal domain BS615_06475 PF01281 Ribosomal protein L9, N-terminal domain BS615_06475 PF03948 Ribosomal protein L9, C-terminal domain BS615_06480 PF01084 Ribosomal protein S18 BS615_06485 PF01250 Ribosomal protein S6 BS615_06490 PF01040 UbiA prenyltransferase family BS615_06495 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BS615_06500 PF00510 Cytochrome c oxidase subunit III BS615_06505 PF00115 Cytochrome C and Quinol oxidase polypeptide I BS615_06510 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BS615_06510 PF06481 COX Aromatic Rich Motif BS615_06520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BS615_06520 PF02896 PEP-utilising enzyme, TIM barrel domain BS615_06520 PF00391 PEP-utilising enzyme, mobile domain BS615_06525 PF03618 Kinase/pyrophosphorylase BS615_06535 PF01522 Polysaccharide deacetylase BS615_06535 PF14883 Hypothetical glycosyl hydrolase family 13 BS615_06540 PF00535 Glycosyl transferase family 2 BS615_06545 PF13994 PgaD-like protein BS615_06555 PF00296 Luciferase-like monooxygenase BS615_06575 PF03466 LysR substrate binding domain BS615_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_06585 PF03462 PCRF domain BS615_06585 PF00472 RF-1 domain BS615_06590 PF17827 PrmC N-terminal domain BS615_06590 PF13847 Methyltransferase domain BS615_06595 PF00528 Binding-protein-dependent transport system inner membrane component BS615_06600 PF09084 NMT1/THI5 like BS615_06605 PF12833 Helix-turn-helix domain BS615_06610 PF00106 short chain dehydrogenase BS615_06615 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_06615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_06615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_06620 PF00501 AMP-binding enzyme BS615_06620 PF13193 AMP-binding enzyme C-terminal domain BS615_06625 PF01613 Flavin reductase like domain BS615_06630 PF00899 ThiF family BS615_06635 PF03109 ABC1 family BS615_06650 PF03814 Potassium-transporting ATPase A subunit BS615_06660 PF02669 K+-transporting ATPase, c chain BS615_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_06665 PF00512 His Kinase A (phospho-acceptor) domain BS615_06665 PF02702 Osmosensitive K+ channel His kinase sensor domain BS615_06665 PF13493 Domain of unknown function (DUF4118) BS615_06670 PF00486 Transcriptional regulatory protein, C terminal BS615_06670 PF00072 Response regulator receiver domain BS615_06675 PF00120 Glutamine synthetase, catalytic domain BS615_06685 PF03232 Ubiquinone biosynthesis protein COQ7 BS615_06690 PF07690 Major Facilitator Superfamily BS615_06695 PF07244 Surface antigen variable number repeat BS615_06695 PF01103 Surface antigen BS615_06695 PF17243 POTRA domain TamA domain 1 BS615_06715 PF11791 Aconitate B N-terminal domain BS615_06715 PF06434 Aconitate hydratase 2 N-terminus BS615_06715 PF00330 Aconitase family (aconitate hydratase) BS615_06725 PF00027 Cyclic nucleotide-binding domain BS615_06725 PF00520 Ion transport protein BS615_06730 PF07690 Major Facilitator Superfamily BS615_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_06745 PF03466 LysR substrate binding domain BS615_06750 PF04284 Protein of unknown function (DUF441) BS615_06760 PF00849 RNA pseudouridylate synthase BS615_06760 PF01479 S4 domain BS615_06775 PF00849 RNA pseudouridylate synthase BS615_06775 PF01479 S4 domain BS615_06780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BS615_06785 PF01119 DNA mismatch repair protein, C-terminal domain BS615_06785 PF08676 MutL C terminal dimerisation domain BS615_06795 PF17209 Hfq protein BS615_06805 PF00881 Nitroreductase family BS615_06820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BS615_06825 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BS615_06825 PF00749 tRNA synthetases class I (E and Q), catalytic domain BS615_06830 PF00117 Glutamine amidotransferase class-I BS615_06830 PF00958 GMP synthase C terminal domain BS615_06830 PF02540 NAD synthase BS615_06835 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BS615_06840 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BS615_06845 PF13520 Amino acid permease BS615_06850 PF00171 Aldehyde dehydrogenase family BS615_06865 PF00465 Iron-containing alcohol dehydrogenase BS615_06870 PF05970 PIF1-like helicase BS615_06870 PF14493 Helix-turn-helix domain BS615_06880 PF06445 GyrI-like small molecule binding domain BS615_06885 PF02110 Hydroxyethylthiazole kinase family BS615_06900 PF11940 Domain of unknown function (DUF3458) Ig-like fold BS615_06900 PF01433 Peptidase family M1 domain BS615_06900 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BS615_06910 PF00106 short chain dehydrogenase BS615_06920 PF01817 Chorismate mutase type II BS615_06925 PF01037 Lrp/AsnC ligand binding domain BS615_06945 PF00440 Bacterial regulatory proteins, tetR family BS615_06950 PF00593 TonB dependent receptor BS615_06950 PF07715 TonB-dependent Receptor Plug Domain BS615_06955 PF00924 Mechanosensitive ion channel BS615_06995 PF00593 TonB dependent receptor BS615_06995 PF07715 TonB-dependent Receptor Plug Domain BS615_07015 PF00005 ABC transporter BS615_07015 PF12848 ABC transporter BS615_07020 PF00582 Universal stress protein family BS615_07040 PF00690 Cation transporter/ATPase, N-terminus BS615_07040 PF00689 Cation transporting ATPase, C-terminus BS615_07045 PF02308 MgtC family BS615_07050 PF03594 Benzoate membrane transport protein BS615_07055 PF01037 Lrp/AsnC ligand binding domain BS615_07060 PF01810 LysE type translocator BS615_07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07070 PF03466 LysR substrate binding domain BS615_07080 PF00108 Thiolase, N-terminal domain BS615_07080 PF02803 Thiolase, C-terminal domain BS615_07105 PF07690 Major Facilitator Superfamily BS615_07115 PF04185 Phosphoesterase family BS615_07115 PF05506 Domain of unknown function (DUF756) BS615_07120 PF03061 Thioesterase superfamily BS615_07125 PF00465 Iron-containing alcohol dehydrogenase BS615_07135 PF01451 Low molecular weight phosphotyrosine protein phosphatase BS615_07140 PF01565 FAD binding domain BS615_07140 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BS615_07155 PF01645 Conserved region in glutamate synthase BS615_07185 PF00171 Aldehyde dehydrogenase family BS615_07190 PF02627 Carboxymuconolactone decarboxylase family BS615_07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07195 PF03466 LysR substrate binding domain BS615_07200 PF02525 Flavodoxin-like fold BS615_07205 PF09339 IclR helix-turn-helix domain BS615_07205 PF01614 Bacterial transcriptional regulator BS615_07210 PF01494 FAD binding domain BS615_07215 PF00392 Bacterial regulatory proteins, gntR family BS615_07215 PF07702 UTRA domain BS615_07225 PF00005 ABC transporter BS615_07225 PF08402 TOBE domain BS615_07230 PF00528 Binding-protein-dependent transport system inner membrane component BS615_07235 PF01266 FAD dependent oxidoreductase BS615_07240 PF00266 Aminotransferase class-V BS615_07245 PF13419 Haloacid dehalogenase-like hydrolase BS615_07250 PF07690 Major Facilitator Superfamily BS615_07255 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_07255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_07255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_07260 PF02515 CoA-transferase family III BS615_07265 PF09339 IclR helix-turn-helix domain BS615_07270 PF00378 Enoyl-CoA hydratase/isomerase BS615_07275 PF03060 Nitronate monooxygenase BS615_07280 PF07690 Major Facilitator Superfamily BS615_07285 PF09339 IclR helix-turn-helix domain BS615_07290 PF02803 Thiolase, C-terminal domain BS615_07290 PF00108 Thiolase, N-terminal domain BS615_07295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BS615_07295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BS615_07295 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BS615_07305 PF00378 Enoyl-CoA hydratase/isomerase BS615_07310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_07310 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_07310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_07315 PF07690 Major Facilitator Superfamily BS615_07320 PF01144 Coenzyme A transferase BS615_07325 PF01144 Coenzyme A transferase BS615_07335 PF07690 Major Facilitator Superfamily BS615_07345 PF12806 Acetyl-CoA dehydrogenase C-terminal like BS615_07345 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_07345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_07345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_07360 PF03466 LysR substrate binding domain BS615_07360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07365 PF00682 HMGL-like BS615_07370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BS615_07370 PF00289 Biotin carboxylase, N-terminal domain BS615_07370 PF02785 Biotin carboxylase C-terminal domain BS615_07370 PF00364 Biotin-requiring enzyme BS615_07375 PF00378 Enoyl-CoA hydratase/isomerase BS615_07380 PF01039 Carboxyl transferase domain BS615_07385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_07385 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_07385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_07390 PF00440 Bacterial regulatory proteins, tetR family BS615_07395 PF00501 AMP-binding enzyme BS615_07395 PF13193 AMP-binding enzyme C-terminal domain BS615_07415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07415 PF03466 LysR substrate binding domain BS615_07450 PF18146 Damage-inducible protein CinA KH domain BS615_07450 PF02464 Competence-damaged protein BS615_07450 PF00994 Probable molybdopterin binding domain BS615_07460 PF06628 Catalase-related immune-responsive BS615_07460 PF18011 C-terminal domain found in long catalases BS615_07460 PF00199 Catalase BS615_07485 PF00717 Peptidase S24-like BS615_07495 PF13404 AsnC-type helix-turn-helix domain BS615_07495 PF01037 Lrp/AsnC ligand binding domain BS615_07505 PF00512 His Kinase A (phospho-acceptor) domain BS615_07505 PF00072 Response regulator receiver domain BS615_07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_07505 PF09308 LuxQ, periplasmic BS615_07510 PF00072 Response regulator receiver domain BS615_07520 PF00528 Binding-protein-dependent transport system inner membrane component BS615_07525 PF00528 Binding-protein-dependent transport system inner membrane component BS615_07530 PF00005 ABC transporter BS615_07535 PF00497 Bacterial extracellular solute-binding proteins, family 3 BS615_07540 PF00497 Bacterial extracellular solute-binding proteins, family 3 BS615_07545 PF03466 LysR substrate binding domain BS615_07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07550 PF01810 LysE type translocator BS615_07555 PF00266 Aminotransferase class-V BS615_07565 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_07570 PF00581 Rhodanese-like domain BS615_07580 PF03466 LysR substrate binding domain BS615_07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07585 PF02798 Glutathione S-transferase, N-terminal domain BS615_07590 PF02798 Glutathione S-transferase, N-terminal domain BS615_07590 PF14834 Glutathione S-transferase, C-terminal domain BS615_07595 PF03466 LysR substrate binding domain BS615_07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07600 PF03788 LrgA family BS615_07605 PF04172 LrgB-like family BS615_07610 PF00392 Bacterial regulatory proteins, gntR family BS615_07610 PF00155 Aminotransferase class I and II BS615_07625 PF07690 Major Facilitator Superfamily BS615_07630 PF16957 Malonate decarboxylase, alpha subunit, transporter BS615_07635 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BS615_07640 PF06857 Malonate decarboxylase delta subunit (MdcD) BS615_07645 PF01039 Carboxyl transferase domain BS615_07655 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BS615_07660 PF00698 Acyl transferase domain BS615_07675 PF03466 LysR substrate binding domain BS615_07675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07680 PF00392 Bacterial regulatory proteins, gntR family BS615_07680 PF00155 Aminotransferase class I and II BS615_07690 PF02322 Cytochrome bd terminal oxidase subunit II BS615_07695 PF01654 Cytochrome bd terminal oxidase subunit I BS615_07710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_07710 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_07710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BS615_07715 PF00296 Luciferase-like monooxygenase BS615_07720 PF00083 Sugar (and other) transporter BS615_07730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BS615_07735 PF00005 ABC transporter BS615_07740 PF00528 Binding-protein-dependent transport system inner membrane component BS615_07745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BS615_07750 PF01177 Asp/Glu/Hydantoin racemase BS615_07755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BS615_07765 PF03466 LysR substrate binding domain BS615_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07775 PF01979 Amidohydrolase family BS615_07775 PF13382 Adenine deaminase C-terminal domain BS615_07785 PF03960 ArsC family BS615_07790 PF01022 Bacterial regulatory protein, arsR family BS615_07795 PF01758 Sodium Bile acid symporter family BS615_07800 PF03466 LysR substrate binding domain BS615_07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_07815 PF13192 Thioredoxin domain BS615_07815 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_07830 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_07835 PF00588 SpoU rRNA Methylase family BS615_07840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BS615_07840 PF02811 PHP domain BS615_07840 PF01336 OB-fold nucleic acid binding domain BS615_07840 PF14579 Helix-hairpin-helix motif BS615_07840 PF07733 Bacterial DNA polymerase III alpha NTPase domain BS615_07845 PF17763 Glutaminase/Asparaginase C-terminal domain BS615_07845 PF00710 Asparaginase, N-terminal BS615_07850 PF00375 Sodium:dicarboxylate symporter family BS615_07855 PF00155 Aminotransferase class I and II BS615_07860 PF01641 SelR domain BS615_07865 PF00255 Glutathione peroxidase BS615_07870 PF12852 Cupin BS615_07870 PF12833 Helix-turn-helix domain BS615_07880 PF00155 Aminotransferase class I and II BS615_07885 PF08335 GlnD PII-uridylyltransferase BS615_07885 PF01909 Nucleotidyltransferase domain BS615_07885 PF01966 HD domain BS615_07890 PF02222 ATP-grasp domain BS615_07900 PF05437 Branched-chain amino acid transport protein (AzlD) BS615_07905 PF03591 AzlC protein BS615_07930 PF01926 50S ribosome-binding GTPase BS615_07930 PF06071 Protein of unknown function (DUF933) BS615_07935 PF00528 Binding-protein-dependent transport system inner membrane component BS615_07940 PF09383 NIL domain BS615_07940 PF00005 ABC transporter BS615_07945 PF03180 NLPA lipoprotein BS615_07950 PF03180 NLPA lipoprotein BS615_07955 PF00296 Luciferase-like monooxygenase BS615_07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_07965 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BS615_07985 PF00528 Binding-protein-dependent transport system inner membrane component BS615_07990 PF00005 ABC transporter BS615_08000 PF01037 Lrp/AsnC ligand binding domain BS615_08005 PF01709 Transcriptional regulator BS615_08015 PF00440 Bacterial regulatory proteins, tetR family BS615_08050 PF03466 LysR substrate binding domain BS615_08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_08060 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BS615_08070 PF00892 EamA-like transporter family BS615_08095 PF13954 PapC N-terminal domain BS615_08095 PF13953 PapC C-terminal domain BS615_08095 PF00577 Outer membrane usher protein BS615_08100 PF02753 Pili assembly chaperone PapD, C-terminal domain BS615_08100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BS615_08105 PF16970 Type-1 fimbrial protein, A BS615_08120 PF04055 Radical SAM superfamily BS615_08120 PF06968 Biotin and Thiamin Synthesis associated domain BS615_08125 PF08331 Domain of unknown function (DUF1730) BS615_08130 PF01256 Carbohydrate kinase BS615_08130 PF03853 YjeF-related protein N-terminus BS615_08135 PF02075 Crossover junction endodeoxyribonuclease RuvC BS615_08150 PF00905 Penicillin binding protein transpeptidase domain BS615_08170 PF00438 S-adenosylmethionine synthetase, N-terminal domain BS615_08170 PF02772 S-adenosylmethionine synthetase, central domain BS615_08170 PF02773 S-adenosylmethionine synthetase, C-terminal domain BS615_08175 PF02779 Transketolase, pyrimidine binding domain BS615_08175 PF00456 Transketolase, thiamine diphosphate binding domain BS615_08175 PF02780 Transketolase, C-terminal domain BS615_08185 PF04264 YceI-like domain BS615_08195 PF09992 Phosphodiester glycosidase BS615_08205 PF05958 tRNA (Uracil-5-)-methyltransferase BS615_08210 PF04229 GrpB protein BS615_08215 PF01619 Proline dehydrogenase BS615_08215 PF14850 DNA-binding domain of Proline dehydrogenase BS615_08215 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BS615_08215 PF00171 Aldehyde dehydrogenase family BS615_08220 PF01037 Lrp/AsnC ligand binding domain BS615_08225 PF00474 Sodium:solute symporter family BS615_08230 PF02146 Sir2 family BS615_08235 PF01597 Glycine cleavage H-protein BS615_08240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BS615_08240 PF12833 Helix-turn-helix domain BS615_08250 PF00005 ABC transporter BS615_08250 PF00664 ABC transporter transmembrane region BS615_08255 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BS615_08260 PF06912 Protein of unknown function (DUF1275) BS615_08265 PF00375 Sodium:dicarboxylate symporter family BS615_08280 PF08007 Cupin superfamily protein BS615_08285 PF02545 Maf-like protein BS615_08295 PF00162 Phosphoglycerate kinase BS615_08305 PF01116 Fructose-bisphosphate aldolase class-II BS615_08310 PF00639 PPIC-type PPIASE domain BS615_08310 PF09312 SurA N-terminal domain BS615_08315 PF04453 LPS transport system D BS615_08315 PF03968 OstA-like protein BS615_08320 PF01636 Phosphotransferase enzyme family BS615_08325 PF00483 Nucleotidyl transferase BS615_08330 PF02527 rRNA small subunit methyltransferase G BS615_08335 PF13614 AAA domain BS615_08340 PF17762 HTH domain found in ParB protein BS615_08340 PF02195 ParB-like nuclease domain BS615_08345 PF01618 MotA/TolQ/ExbB proton channel family BS615_08355 PF00664 ABC transporter transmembrane region BS615_08355 PF00005 ABC transporter BS615_08360 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BS615_08365 PF02348 Cytidylyltransferase BS615_08370 PF09115 DNA polymerase III, delta subunit, C terminal BS615_08380 PF01026 TatD related DNase BS615_08395 PF02501 Type II secretion system (T2SS), protein I BS615_08395 PF07963 Prokaryotic N-terminal methylation motif BS615_08400 PF07963 Prokaryotic N-terminal methylation motif BS615_08400 PF11612 Type II secretion system (T2SS), protein J BS615_08405 PF03934 Type II secretion system (T2SS), protein K BS615_08415 PF03167 Uracil DNA glycosylase superfamily BS615_08425 PF14437 MafB19-like deaminase BS615_08435 PF02224 Cytidylate kinase BS615_08440 PF00575 S1 RNA binding domain BS615_08445 PF00216 Bacterial DNA-binding protein BS615_08455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BS615_08465 PF00743 Flavin-binding monooxygenase-like BS615_08475 PF03969 AFG1-like ATPase BS615_08480 PF01274 Malate synthase BS615_08490 PF02472 Biopolymer transport protein ExbD/TolR BS615_08495 PF02472 Biopolymer transport protein ExbD/TolR BS615_08500 PF01618 MotA/TolQ/ExbB proton channel family BS615_08510 PF07715 TonB-dependent Receptor Plug Domain BS615_08510 PF00593 TonB dependent receptor BS615_08525 PF01432 Peptidase family M3 BS615_08530 PF00528 Binding-protein-dependent transport system inner membrane component BS615_08535 PF00528 Binding-protein-dependent transport system inner membrane component BS615_08540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BS615_08540 PF00005 ABC transporter BS615_08555 PF00459 Inositol monophosphatase family BS615_08565 PF01649 Ribosomal protein S20 BS615_08570 PF13460 NAD(P)H-binding BS615_08575 PF03737 Aldolase/RraA BS615_08595 PF02559 CarD-like/TRCF domain BS615_08595 PF00270 DEAD/DEAH box helicase BS615_08595 PF17757 UvrB interaction domain BS615_08595 PF03461 TRCF domain BS615_08595 PF00271 Helicase conserved C-terminal domain BS615_08605 PF00211 Adenylate and Guanylate cyclase catalytic domain BS615_08610 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_08615 PF00012 Hsp70 protein BS615_08620 PF00226 DnaJ domain BS615_08620 PF07743 HSCB C-terminal oligomerisation domain BS615_08625 PF01521 Iron-sulphur cluster biosynthesis BS615_08630 PF01592 NifU-like N terminal domain BS615_08635 PF00266 Aminotransferase class-V BS615_08640 PF02082 Transcriptional regulator BS615_08655 PF00216 Bacterial DNA-binding protein BS615_08660 PF00639 PPIC-type PPIASE domain BS615_08660 PF09312 SurA N-terminal domain BS615_08665 PF12852 Cupin BS615_08665 PF12833 Helix-turn-helix domain BS615_08670 PF00487 Fatty acid desaturase BS615_08675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_08675 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_08675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_08680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_08680 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_08680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_08685 PF03109 ABC1 family BS615_08695 PF04073 Aminoacyl-tRNA editing domain BS615_08700 PF06276 Ferric iron reductase FhuF-like transporter BS615_08700 PF04183 IucA / IucC family BS615_08705 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BS615_08710 PF07690 Major Facilitator Superfamily BS615_08715 PF06276 Ferric iron reductase FhuF-like transporter BS615_08715 PF04183 IucA / IucC family BS615_08720 PF06276 Ferric iron reductase FhuF-like transporter BS615_08720 PF04183 IucA / IucC family BS615_08735 PF07715 TonB-dependent Receptor Plug Domain BS615_08735 PF00593 TonB dependent receptor BS615_08760 PF13419 Haloacid dehalogenase-like hydrolase BS615_08770 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BS615_08790 PF02654 Cobalamin-5-phosphate synthase BS615_08795 PF00793 DAHP synthetase I family BS615_08800 PF01925 Sulfite exporter TauE/SafE BS615_08820 PF07715 TonB-dependent Receptor Plug Domain BS615_08820 PF00593 TonB dependent receptor BS615_08825 PF02684 Lipid-A-disaccharide synthetase BS615_08835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_08840 PF00005 ABC transporter BS615_08875 PF01230 HIT domain BS615_08905 PF08241 Methyltransferase domain BS615_08910 PF00561 alpha/beta hydrolase fold BS615_08915 PF01053 Cys/Met metabolism PLP-dependent enzyme BS615_08925 PF02575 YbaB/EbfC DNA-binding family BS615_08930 PF02132 RecR protein BS615_08930 PF13662 Toprim domain BS615_08935 PF01612 3'-5' exonuclease BS615_08935 PF00570 HRDC domain BS615_08955 PF05166 YcgL domain BS615_08965 PF00004 ATPase family associated with various cellular activities (AAA) BS615_08965 PF17862 AAA+ lid domain BS615_08965 PF01434 Peptidase family M41 BS615_08975 PF00291 Pyridoxal-phosphate dependent enzyme BS615_08980 PF05175 Methyltransferase small domain BS615_08985 PF01264 Chorismate synthase BS615_08990 PF08448 PAS fold BS615_08990 PF00990 Diguanylate cyclase, GGDEF domain BS615_09005 PF04055 Radical SAM superfamily BS615_09010 PF00676 Dehydrogenase E1 component BS615_09015 PF02779 Transketolase, pyrimidine binding domain BS615_09015 PF02780 Transketolase, C-terminal domain BS615_09020 PF00364 Biotin-requiring enzyme BS615_09020 PF02817 e3 binding domain BS615_09020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BS615_09025 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_09025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BS615_09030 PF00106 short chain dehydrogenase BS615_09035 PF00107 Zinc-binding dehydrogenase BS615_09035 PF08240 Alcohol dehydrogenase GroES-like domain BS615_09040 PF01062 Bestrophin, RFP-TM, chloride channel BS615_09045 PF00072 Response regulator receiver domain BS615_09045 PF00158 Sigma-54 interaction domain BS615_09045 PF02954 Bacterial regulatory protein, Fis family BS615_09050 PF04273 Putative phosphatase (DUF442) BS615_09050 PF00753 Metallo-beta-lactamase superfamily BS615_09055 PF04273 Putative phosphatase (DUF442) BS615_09055 PF00753 Metallo-beta-lactamase superfamily BS615_09060 PF01925 Sulfite exporter TauE/SafE BS615_09075 PF06445 GyrI-like small molecule binding domain BS615_09075 PF12833 Helix-turn-helix domain BS615_09080 PF01638 HxlR-like helix-turn-helix BS615_09085 PF02525 Flavodoxin-like fold BS615_09110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BS615_09115 PF00528 Binding-protein-dependent transport system inner membrane component BS615_09120 PF00005 ABC transporter BS615_09135 PF00083 Sugar (and other) transporter BS615_09140 PF07715 TonB-dependent Receptor Plug Domain BS615_09140 PF00593 TonB dependent receptor BS615_09145 PF00206 Lyase BS615_09145 PF10415 Fumarase C C-terminus BS615_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09160 PF03466 LysR substrate binding domain BS615_09165 PF03466 LysR substrate binding domain BS615_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09170 PF02803 Thiolase, C-terminal domain BS615_09170 PF00108 Thiolase, N-terminal domain BS615_09175 PF02667 Short chain fatty acid transporter BS615_09180 PF01144 Coenzyme A transferase BS615_09185 PF01144 Coenzyme A transferase BS615_09190 PF03466 LysR substrate binding domain BS615_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09220 PF06719 AraC-type transcriptional regulator N-terminus BS615_09220 PF12833 Helix-turn-helix domain BS615_09225 PF07690 Major Facilitator Superfamily BS615_09230 PF01738 Dienelactone hydrolase family BS615_09245 PF01613 Flavin reductase like domain BS615_09255 PF12833 Helix-turn-helix domain BS615_09255 PF14525 AraC-binding-like domain BS615_09260 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_09260 PF00175 Oxidoreductase NAD-binding domain BS615_09260 PF00970 Oxidoreductase FAD-binding domain BS615_09265 PF00866 Ring hydroxylating beta subunit BS615_09270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BS615_09270 PF00355 Rieske [2Fe-2S] domain BS615_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09275 PF03459 TOBE domain BS615_09285 PF00528 Binding-protein-dependent transport system inner membrane component BS615_09290 PF03459 TOBE domain BS615_09290 PF00005 ABC transporter BS615_09295 PF00106 short chain dehydrogenase BS615_09300 PF00857 Isochorismatase family BS615_09300 PF00550 Phosphopantetheine attachment site BS615_09310 PF00149 Calcineurin-like phosphoesterase BS615_09315 PF13090 Polyphosphate kinase C-terminal domain 2 BS615_09315 PF17941 Polyphosphate kinase C-terminal domain 1 BS615_09315 PF13089 Polyphosphate kinase N-terminal domain BS615_09315 PF02503 Polyphosphate kinase middle domain BS615_09320 PF08042 PqqA family BS615_09325 PF12706 Beta-lactamase superfamily domain BS615_09330 PF03070 TENA/THI-4/PQQC family BS615_09335 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BS615_09340 PF13186 Iron-sulfur cluster-binding domain BS615_09340 PF04055 Radical SAM superfamily BS615_09345 PF01244 Membrane dipeptidase (Peptidase family M19) BS615_09365 PF13091 PLD-like domain BS615_09380 PF00199 Catalase BS615_09390 PF00107 Zinc-binding dehydrogenase BS615_09390 PF08240 Alcohol dehydrogenase GroES-like domain BS615_09400 PF00419 Fimbrial protein BS615_09405 PF13953 PapC C-terminal domain BS615_09405 PF00577 Outer membrane usher protein BS615_09405 PF13954 PapC N-terminal domain BS615_09410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BS615_09410 PF02753 Pili assembly chaperone PapD, C-terminal domain BS615_09425 PF16970 Type-1 fimbrial protein, A BS615_09445 PF01266 FAD dependent oxidoreductase BS615_09465 PF00743 Flavin-binding monooxygenase-like BS615_09470 PF12146 Serine aminopeptidase, S33 BS615_09475 PF02321 Outer membrane efflux protein BS615_09480 PF00873 AcrB/AcrD/AcrF family BS615_09485 PF00529 HlyD membrane-fusion protein of T1SS BS615_09485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_09490 PF00486 Transcriptional regulatory protein, C terminal BS615_09490 PF00072 Response regulator receiver domain BS615_09495 PF16527 Two-component sensor protein CpxA, periplasmic domain BS615_09495 PF00672 HAMP domain BS615_09495 PF00512 His Kinase A (phospho-acceptor) domain BS615_09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_09505 PF12833 Helix-turn-helix domain BS615_09505 PF02311 AraC-like ligand binding domain BS615_09510 PF12146 Serine aminopeptidase, S33 BS615_09565 PF13291 ACT domain BS615_09565 PF02824 TGS domain BS615_09565 PF04607 Region found in RelA / SpoT proteins BS615_09575 PF01975 Survival protein SurE BS615_09600 PF07690 Major Facilitator Superfamily BS615_09605 PF13533 Biotin-lipoyl like BS615_09610 PF01425 Amidase BS615_09615 PF00196 Bacterial regulatory proteins, luxR family BS615_09690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BS615_09695 PF14572 Phosphoribosyl synthetase-associated domain BS615_09695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BS615_09715 PF00005 ABC transporter BS615_09745 PF06719 AraC-type transcriptional regulator N-terminus BS615_09745 PF12833 Helix-turn-helix domain BS615_09750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BS615_09750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BS615_09755 PF07690 Major Facilitator Superfamily BS615_09760 PF01370 NAD dependent epimerase/dehydratase family BS615_09765 PF03466 LysR substrate binding domain BS615_09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09775 PF00920 Dehydratase family BS615_09780 PF00171 Aldehyde dehydrogenase family BS615_09795 PF00529 HlyD membrane-fusion protein of T1SS BS615_09795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_09815 PF03737 Aldolase/RraA BS615_09820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BS615_09820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BS615_09820 PF01842 ACT domain BS615_09825 PF07690 Major Facilitator Superfamily BS615_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09845 PF03466 LysR substrate binding domain BS615_09855 PF08450 SMP-30/Gluconolactonase/LRE-like region BS615_09870 PF04909 Amidohydrolase BS615_09875 PF07690 Major Facilitator Superfamily BS615_09890 PF05860 haemagglutination activity domain BS615_09890 PF13018 Extended Signal Peptide of Type V secretion system BS615_09890 PF04829 Pre-toxin domain with VENN motif BS615_09890 PF13332 Hemagglutinin repeat BS615_09895 PF08479 POTRA domain, ShlB-type BS615_09895 PF17287 POTRA domain BS615_09895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BS615_09910 PF07687 Peptidase dimerisation domain BS615_09910 PF01546 Peptidase family M20/M25/M40 BS615_09920 PF00999 Sodium/hydrogen exchanger family BS615_09920 PF02254 TrkA-N domain BS615_09925 PF07995 Glucose / Sorbosone dehydrogenase BS615_09930 PF03466 LysR substrate binding domain BS615_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_09935 PF00857 Isochorismatase family BS615_09945 PF08359 YsiA-like protein, C-terminal region BS615_09945 PF00440 Bacterial regulatory proteins, tetR family BS615_09950 PF12706 Beta-lactamase superfamily domain BS615_09960 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_09970 PF00376 MerR family regulatory protein BS615_09970 PF09278 MerR, DNA binding BS615_09975 PF01872 RibD C-terminal domain BS615_09980 PF00106 short chain dehydrogenase BS615_09985 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_09985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BS615_09990 PF01047 MarR family BS615_09995 PF07859 alpha/beta hydrolase fold BS615_10015 PF06628 Catalase-related immune-responsive BS615_10015 PF00199 Catalase BS615_10020 PF00561 alpha/beta hydrolase fold BS615_10030 PF00171 Aldehyde dehydrogenase family BS615_10035 PF08240 Alcohol dehydrogenase GroES-like domain BS615_10035 PF00107 Zinc-binding dehydrogenase BS615_10040 PF00474 Sodium:solute symporter family BS615_10045 PF04341 Protein of unknown function, DUF485 BS615_10050 PF13193 AMP-binding enzyme C-terminal domain BS615_10050 PF00501 AMP-binding enzyme BS615_10055 PF02954 Bacterial regulatory protein, Fis family BS615_10055 PF06506 Propionate catabolism activator BS615_10055 PF00158 Sigma-54 interaction domain BS615_10065 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_10065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_10065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_10085 PF00171 Aldehyde dehydrogenase family BS615_10095 PF07690 Major Facilitator Superfamily BS615_10100 PF00920 Dehydratase family BS615_10105 PF07729 FCD domain BS615_10105 PF00392 Bacterial regulatory proteins, gntR family BS615_10115 PF03466 LysR substrate binding domain BS615_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_10120 PF13378 Enolase C-terminal domain-like BS615_10120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BS615_10125 PF02426 Muconolactone delta-isomerase BS615_10130 PF04444 Catechol dioxygenase N terminus BS615_10130 PF00775 Dioxygenase BS615_10135 PF01144 Coenzyme A transferase BS615_10140 PF01144 Coenzyme A transferase BS615_10145 PF02803 Thiolase, C-terminal domain BS615_10145 PF00108 Thiolase, N-terminal domain BS615_10150 PF12146 Serine aminopeptidase, S33 BS615_10155 PF01804 Penicillin amidase BS615_10160 PF00171 Aldehyde dehydrogenase family BS615_10170 PF01179 Copper amine oxidase, enzyme domain BS615_10170 PF07833 Copper amine oxidase N-terminal domain BS615_10170 PF02727 Copper amine oxidase, N2 domain BS615_10170 PF02728 Copper amine oxidase, N3 domain BS615_10175 PF02311 AraC-like ligand binding domain BS615_10175 PF12833 Helix-turn-helix domain BS615_10180 PF01613 Flavin reductase like domain BS615_10185 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_10185 PF00175 Oxidoreductase NAD-binding domain BS615_10200 PF00355 Rieske [2Fe-2S] domain BS615_10200 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BS615_10215 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BS615_10220 PF01425 Amidase BS615_10230 PF07690 Major Facilitator Superfamily BS615_10240 PF00106 short chain dehydrogenase BS615_10255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_10255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_10255 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_10260 PF03466 LysR substrate binding domain BS615_10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_10265 PF01614 Bacterial transcriptional regulator BS615_10265 PF09339 IclR helix-turn-helix domain BS615_10270 PF00753 Metallo-beta-lactamase superfamily BS615_10280 PF04143 Sulphur transport BS615_10290 PF01011 PQQ enzyme repeat BS615_10290 PF13360 PQQ-like domain BS615_10295 PF04966 Carbohydrate-selective porin, OprB family BS615_10300 PF05048 Periplasmic copper-binding protein (NosD) BS615_10305 PF01487 Type I 3-dehydroquinase BS615_10310 PF00775 Dioxygenase BS615_10315 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BS615_10315 PF00775 Dioxygenase BS615_10320 PF02627 Carboxymuconolactone decarboxylase family BS615_10325 PF07690 Major Facilitator Superfamily BS615_10330 PF00561 alpha/beta hydrolase fold BS615_10335 PF10397 Adenylosuccinate lyase C-terminus BS615_10335 PF00206 Lyase BS615_10340 PF00108 Thiolase, N-terminal domain BS615_10340 PF02803 Thiolase, C-terminal domain BS615_10345 PF01144 Coenzyme A transferase BS615_10350 PF01144 Coenzyme A transferase BS615_10355 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BS615_10360 PF04977 Septum formation initiator BS615_10365 PF04239 Protein of unknown function (DUF421) BS615_10370 PF00113 Enolase, C-terminal TIM barrel domain BS615_10370 PF03952 Enolase, N-terminal domain BS615_10375 PF00793 DAHP synthetase I family BS615_10380 PF00117 Glutamine amidotransferase class-I BS615_10380 PF06418 CTP synthase N-terminus BS615_10410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BS615_10410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_10425 PF00793 DAHP synthetase I family BS615_10430 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BS615_10435 PF10431 C-terminal, D2-small domain, of ClpB protein BS615_10435 PF02861 Clp amino terminal domain, pathogenicity island component BS615_10435 PF17871 AAA lid domain BS615_10435 PF07724 AAA domain (Cdc48 subfamily) BS615_10435 PF00004 ATPase family associated with various cellular activities (AAA) BS615_10440 PF02617 ATP-dependent Clp protease adaptor protein ClpS BS615_10450 PF02774 Semialdehyde dehydrogenase, dimerisation domain BS615_10450 PF01118 Semialdehyde dehydrogenase, NAD binding domain BS615_10465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BS615_10470 PF00585 C-terminal regulatory domain of Threonine dehydratase BS615_10470 PF00291 Pyridoxal-phosphate dependent enzyme BS615_10475 PF02080 TrkA-C domain BS615_10475 PF02254 TrkA-N domain BS615_10480 PF02386 Cation transport protein BS615_10485 PF02253 Phospholipase A1 BS615_10490 PF00675 Insulinase (Peptidase family M16) BS615_10490 PF08367 Peptidase M16C associated BS615_10490 PF05193 Peptidase M16 inactive domain BS615_10495 PF07715 TonB-dependent Receptor Plug Domain BS615_10495 PF00593 TonB dependent receptor BS615_10500 PF00294 pfkB family carbohydrate kinase BS615_10510 PF07290 Protein of unknown function (DUF1449) BS615_10520 PF01654 Cytochrome bd terminal oxidase subunit I BS615_10525 PF02322 Cytochrome bd terminal oxidase subunit II BS615_10530 PF08173 Membrane bound YbgT-like protein BS615_10545 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BS615_10555 PF00448 SRP54-type protein, GTPase domain BS615_10555 PF02881 SRP54-type protein, helical bundle domain BS615_10585 PF00571 CBS domain BS615_10585 PF00478 IMP dehydrogenase / GMP reductase domain BS615_10590 PF00202 Aminotransferase class-III BS615_10595 PF00462 Glutaredoxin BS615_10605 PF03466 LysR substrate binding domain BS615_10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_10610 PF00557 Metallopeptidase family M24 BS615_10615 PF05525 Branched-chain amino acid transport protein BS615_10645 PF00294 pfkB family carbohydrate kinase BS615_10650 PF02378 Phosphotransferase system, EIIC BS615_10650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BS615_10670 PF00990 Diguanylate cyclase, GGDEF domain BS615_10670 PF00563 EAL domain BS615_10670 PF03707 Bacterial signalling protein N terminal repeat BS615_10680 PF07995 Glucose / Sorbosone dehydrogenase BS615_10685 PF02586 SOS response associated peptidase (SRAP) BS615_10690 PF01740 STAS domain BS615_10690 PF00916 Sulfate permease family BS615_10695 PF05922 Peptidase inhibitor I9 BS615_10695 PF00082 Subtilase family BS615_10705 PF00324 Amino acid permease BS615_10710 PF00266 Aminotransferase class-V BS615_10715 PF01037 Lrp/AsnC ligand binding domain BS615_10740 PF13419 Haloacid dehalogenase-like hydrolase BS615_10745 PF01479 S4 domain BS615_10750 PF00154 recA bacterial DNA recombination protein BS615_10755 PF02631 RecX family BS615_10770 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BS615_10770 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_10775 PF07977 FabA-like domain BS615_10780 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_10780 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BS615_10790 PF01103 Surface antigen BS615_10790 PF07244 Surface antigen variable number repeat BS615_10795 PF02163 Peptidase family M50 BS615_10795 PF17820 PDZ domain BS615_10795 PF13180 PDZ domain BS615_10800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BS615_10800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BS615_10800 PF13288 DXP reductoisomerase C-terminal domain BS615_10810 PF01255 Putative undecaprenyl diphosphate synthase BS615_10815 PF01765 Ribosome recycling factor BS615_10820 PF00696 Amino acid kinase family BS615_10825 PF04055 Radical SAM superfamily BS615_10825 PF18693 TRAM domain BS615_10825 PF00919 Uncharacterized protein family UPF0004 BS615_10835 PF00158 Sigma-54 interaction domain BS615_10835 PF00072 Response regulator receiver domain BS615_10835 PF02954 Bacterial regulatory protein, Fis family BS615_10840 PF00440 Bacterial regulatory proteins, tetR family BS615_10845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BS615_10845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BS615_10855 PF02542 YgbB family BS615_10865 PF01266 FAD dependent oxidoreductase BS615_10890 PF00206 Lyase BS615_10890 PF10415 Fumarase C C-terminus BS615_10895 PF16363 GDP-mannose 4,6 dehydratase BS615_10900 PF02635 DsrE/DsrF-like family BS615_10920 PF00892 EamA-like transporter family BS615_10925 PF00155 Aminotransferase class I and II BS615_10925 PF00392 Bacterial regulatory proteins, gntR family BS615_10930 PF01638 HxlR-like helix-turn-helix BS615_10935 PF03453 MoeA N-terminal region (domain I and II) BS615_10935 PF03454 MoeA C-terminal region (domain IV) BS615_10935 PF00994 Probable molybdopterin binding domain BS615_10940 PF00994 Probable molybdopterin binding domain BS615_10940 PF01967 MoaC family BS615_10945 PF02391 MoaE protein BS615_10955 PF04055 Radical SAM superfamily BS615_10955 PF06463 Molybdenum Cofactor Synthesis C BS615_10960 PF00384 Molybdopterin oxidoreductase BS615_10960 PF01568 Molydopterin dinucleotide binding domain BS615_10960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BS615_10965 PF12804 MobA-like NTP transferase domain BS615_10970 PF00384 Molybdopterin oxidoreductase BS615_10970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BS615_10970 PF04324 BFD-like [2Fe-2S] binding domain BS615_10970 PF01568 Molydopterin dinucleotide binding domain BS615_10975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BS615_10975 PF04324 BFD-like [2Fe-2S] binding domain BS615_10975 PF18267 Rubredoxin NAD+ reductase C-terminal domain BS615_10975 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_10975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BS615_10980 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_10980 PF18267 Rubredoxin NAD+ reductase C-terminal domain BS615_10980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BS615_10980 PF13806 Rieske-like [2Fe-2S] domain BS615_10980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BS615_10980 PF04324 BFD-like [2Fe-2S] binding domain BS615_10990 PF00072 Response regulator receiver domain BS615_10990 PF00486 Transcriptional regulatory protein, C terminal BS615_10995 PF00005 ABC transporter BS615_11000 PF13438 Domain of unknown function (DUF4113) BS615_11000 PF00817 impB/mucB/samB family BS615_11000 PF11799 impB/mucB/samB family C-terminal domain BS615_11005 PF01220 Dehydroquinase class II BS615_11010 PF00364 Biotin-requiring enzyme BS615_11015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BS615_11015 PF02785 Biotin carboxylase C-terminal domain BS615_11015 PF00289 Biotin carboxylase, N-terminal domain BS615_11025 PF12832 MFS_1 like family BS615_11035 PF13333 Integrase core domain BS615_11035 PF13276 HTH-like domain BS615_11035 PF00665 Integrase core domain BS615_11100 PF01551 Peptidase family M23 BS615_11100 PF08525 Opacity-associated protein A N-terminal motif BS615_11100 PF01476 LysM domain BS615_11135 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BS615_11315 PF01555 DNA methylase BS615_11405 PF00171 Aldehyde dehydrogenase family BS615_11410 PF00296 Luciferase-like monooxygenase BS615_11435 PF01292 Prokaryotic cytochrome b561 BS615_11440 PF00199 Catalase BS615_11480 PF03061 Thioesterase superfamily BS615_11485 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_11490 PF07848 PaaX-like protein BS615_11490 PF08223 PaaX-like protein C-terminal domain BS615_11495 PF14535 AMP-binding enzyme C-terminal domain BS615_11495 PF00501 AMP-binding enzyme BS615_11500 PF02803 Thiolase, C-terminal domain BS615_11500 PF00108 Thiolase, N-terminal domain BS615_11505 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BS615_11505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BS615_11505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BS615_11510 PF00378 Enoyl-CoA hydratase/isomerase BS615_11515 PF00378 Enoyl-CoA hydratase/isomerase BS615_11520 PF00175 Oxidoreductase NAD-binding domain BS615_11520 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_11520 PF00970 Oxidoreductase FAD-binding domain BS615_11525 PF01883 Iron-sulfur cluster assembly protein BS615_11530 PF05138 Phenylacetic acid catabolic protein BS615_11535 PF06243 Phenylacetic acid degradation B BS615_11540 PF05138 Phenylacetic acid catabolic protein BS615_11545 PF00171 Aldehyde dehydrogenase family BS615_11545 PF01575 MaoC like domain BS615_11550 PF03315 Serine dehydratase beta chain BS615_11550 PF03313 Serine dehydratase alpha chain BS615_11555 PF13520 Amino acid permease BS615_11560 PF00171 Aldehyde dehydrogenase family BS615_11565 PF00083 Sugar (and other) transporter BS615_11575 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_11575 PF04324 BFD-like [2Fe-2S] binding domain BS615_11585 PF01266 FAD dependent oxidoreductase BS615_11590 PF05544 Proline racemase BS615_11595 PF00392 Bacterial regulatory proteins, gntR family BS615_11605 PF00701 Dihydrodipicolinate synthetase family BS615_11620 PF00376 MerR family regulatory protein BS615_11620 PF09278 MerR, DNA binding BS615_11640 PF02677 Epoxyqueuosine reductase QueH BS615_11655 PF07690 Major Facilitator Superfamily BS615_11660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BS615_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_11670 PF03466 LysR substrate binding domain BS615_11700 PF17871 AAA lid domain BS615_11700 PF00004 ATPase family associated with various cellular activities (AAA) BS615_11700 PF07724 AAA domain (Cdc48 subfamily) BS615_11700 PF10431 C-terminal, D2-small domain, of ClpB protein BS615_11710 PF00691 OmpA family BS615_11710 PF01389 OmpA-like transmembrane domain BS615_11780 PF00005 ABC transporter BS615_11785 PF00497 Bacterial extracellular solute-binding proteins, family 3 BS615_11790 PF01425 Amidase BS615_11795 PF01402 Ribbon-helix-helix protein, copG family BS615_11795 PF08753 NikR C terminal nickel binding domain BS615_11815 PF02525 Flavodoxin-like fold BS615_11820 PF02785 Biotin carboxylase C-terminal domain BS615_11820 PF00289 Biotin carboxylase, N-terminal domain BS615_11820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BS615_11835 PF00107 Zinc-binding dehydrogenase BS615_11835 PF13823 Alcohol dehydrogenase GroES-associated BS615_11835 PF08240 Alcohol dehydrogenase GroES-like domain BS615_11845 PF00440 Bacterial regulatory proteins, tetR family BS615_11870 PF00654 Voltage gated chloride channel BS615_11875 PF02785 Biotin carboxylase C-terminal domain BS615_11875 PF00289 Biotin carboxylase, N-terminal domain BS615_11875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BS615_11875 PF00364 Biotin-requiring enzyme BS615_11885 PF07286 Protein of unknown function (DUF1445) BS615_11890 PF03746 LamB/YcsF family BS615_11895 PF01566 Natural resistance-associated macrophage protein BS615_11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_11900 PF03466 LysR substrate binding domain BS615_11915 PF14220 Domain of unknown function (DUF4329) BS615_11915 PF03527 RHS protein BS615_11915 PF05593 RHS Repeat BS615_11920 PF04717 Type VI secretion system, phage-baseplate injector BS615_11920 PF16671 Actin cross-linking domain BS615_11935 PF13419 Haloacid dehalogenase-like hydrolase BS615_11955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BS615_11955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BS615_11975 PF07690 Major Facilitator Superfamily BS615_11990 PF03279 Bacterial lipid A biosynthesis acyltransferase BS615_11995 PF00563 EAL domain BS615_11995 PF00990 Diguanylate cyclase, GGDEF domain BS615_11995 PF03707 Bacterial signalling protein N terminal repeat BS615_12000 PF00892 EamA-like transporter family BS615_12005 PF01037 Lrp/AsnC ligand binding domain BS615_12010 PF05190 MutS family domain IV BS615_12010 PF01624 MutS domain I BS615_12010 PF05188 MutS domain II BS615_12010 PF05192 MutS domain III BS615_12010 PF00488 MutS domain V BS615_12020 PF00037 4Fe-4S binding domain BS615_12020 PF11953 Domain of unknown function (DUF3470) BS615_12030 PF01596 O-methyltransferase BS615_12040 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_12045 PF01205 Uncharacterized protein family UPF0029 BS615_12055 PF03412 Peptidase C39 family BS615_12055 PF00005 ABC transporter BS615_12055 PF00664 ABC transporter transmembrane region BS615_12060 PF02321 Outer membrane efflux protein BS615_12065 PF12399 Branched-chain amino acid ATP-binding cassette transporter BS615_12065 PF00005 ABC transporter BS615_12070 PF03968 OstA-like protein BS615_12085 PF01380 SIS domain BS615_12085 PF00571 CBS domain BS615_12090 PF09190 DALR domain BS615_12090 PF01406 tRNA synthetases class I (C) catalytic domain BS615_12120 PF01638 HxlR-like helix-turn-helix BS615_12125 PF07690 Major Facilitator Superfamily BS615_12150 PF03807 NADP oxidoreductase coenzyme F420-dependent BS615_12150 PF14748 Pyrroline-5-carboxylate reductase dimerisation BS615_12160 PF00313 'Cold-shock' DNA-binding domain BS615_12165 PF01810 LysE type translocator BS615_12200 PF02601 Exonuclease VII, large subunit BS615_12200 PF13742 OB-fold nucleic acid binding domain BS615_12240 PF00376 MerR family regulatory protein BS615_12240 PF09278 MerR, DNA binding BS615_12245 PF00403 Heavy-metal-associated domain BS615_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_12255 PF03466 LysR substrate binding domain BS615_12260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BS615_12260 PF00355 Rieske [2Fe-2S] domain BS615_12265 PF00866 Ring hydroxylating beta subunit BS615_12270 PF00175 Oxidoreductase NAD-binding domain BS615_12270 PF00970 Oxidoreductase FAD-binding domain BS615_12270 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_12275 PF00106 short chain dehydrogenase BS615_12280 PF03594 Benzoate membrane transport protein BS615_12285 PF07690 Major Facilitator Superfamily BS615_12295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BS615_12295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BS615_12300 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BS615_12300 PF00271 Helicase conserved C-terminal domain BS615_12300 PF04408 Helicase associated domain (HA2) BS615_12300 PF11898 Domain of unknown function (DUF3418) BS615_12300 PF00270 DEAD/DEAH box helicase BS615_12305 PF00578 AhpC/TSA family BS615_12305 PF10417 C-terminal domain of 1-Cys peroxiredoxin BS615_12325 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_12325 PF13192 Thioredoxin domain BS615_12335 PF00043 Glutathione S-transferase, C-terminal domain BS615_12335 PF02798 Glutathione S-transferase, N-terminal domain BS615_12345 PF02390 Putative methyltransferase BS615_12350 PF13417 Glutathione S-transferase, N-terminal domain BS615_12350 PF00043 Glutathione S-transferase, C-terminal domain BS615_12360 PF00691 OmpA family BS615_12360 PF13488 Glycine zipper BS615_12365 PF01979 Amidohydrolase family BS615_12370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BS615_12370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BS615_12380 PF01170 Putative RNA methylase family UPF0020 BS615_12380 PF10672 S-adenosylmethionine-dependent methyltransferase BS615_12380 PF02926 THUMP domain BS615_12395 PF10431 C-terminal, D2-small domain, of ClpB protein BS615_12395 PF07724 AAA domain (Cdc48 subfamily) BS615_12395 PF02861 Clp amino terminal domain, pathogenicity island component BS615_12395 PF00004 ATPase family associated with various cellular activities (AAA) BS615_12395 PF17871 AAA lid domain BS615_12410 PF02566 OsmC-like protein BS615_12415 PF00027 Cyclic nucleotide-binding domain BS615_12415 PF13545 Crp-like helix-turn-helix domain BS615_12420 PF00248 Aldo/keto reductase family BS615_12435 PF00709 Adenylosuccinate synthetase BS615_12440 PF13393 Histidyl-tRNA synthetase BS615_12445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BS615_12445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BS615_12450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BS615_12450 PF01411 tRNA synthetases class II (A) BS615_12450 PF02272 DHHA1 domain BS615_12455 PF13840 ACT domain BS615_12455 PF01842 ACT domain BS615_12455 PF00696 Amino acid kinase family BS615_12460 PF02599 Global regulator protein family BS615_12465 PF01351 Ribonuclease HII BS615_12475 PF01292 Prokaryotic cytochrome b561 BS615_12480 PF00962 Adenosine/AMP deaminase BS615_12485 PF00860 Permease family BS615_12495 PF00743 Flavin-binding monooxygenase-like BS615_12500 PF00106 short chain dehydrogenase BS615_12510 PF17954 Quercetinase C-terminal cupin domain BS615_12510 PF02678 Pirin BS615_12515 PF00440 Bacterial regulatory proteins, tetR family BS615_12515 PF17932 Tetracyclin repressor-like, C-terminal domain BS615_12525 PF00106 short chain dehydrogenase BS615_12535 PF13610 DDE domain BS615_12570 PF03527 RHS protein BS615_12570 PF05593 RHS Repeat BS615_12575 PF16671 Actin cross-linking domain BS615_12575 PF04717 Type VI secretion system, phage-baseplate injector BS615_12595 PF03180 NLPA lipoprotein BS615_12600 PF05987 Bacterial protein of unknown function (DUF898) BS615_12615 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_12615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BS615_12620 PF00764 Arginosuccinate synthase BS615_12625 PF00563 EAL domain BS615_12625 PF01590 GAF domain BS615_12625 PF00990 Diguanylate cyclase, GGDEF domain BS615_12625 PF00360 Phytochrome region BS615_12630 PF01979 Amidohydrolase family BS615_12635 PF00929 Exonuclease BS615_12645 PF07715 TonB-dependent Receptor Plug Domain BS615_12645 PF00593 TonB dependent receptor BS615_12650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BS615_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_12655 PF00005 ABC transporter BS615_12655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BS615_12660 PF00528 Binding-protein-dependent transport system inner membrane component BS615_12660 PF12911 N-terminal TM domain of oligopeptide transport permease C BS615_12665 PF00528 Binding-protein-dependent transport system inner membrane component BS615_12670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BS615_12675 PF01476 LysM domain BS615_12675 PF01464 Transglycosylase SLT domain BS615_12675 PF01476 LysM domain BS615_12675 PF01464 Transglycosylase SLT domain BS615_12680 PF00929 Exonuclease BS615_12690 PF09297 NADH pyrophosphatase zinc ribbon domain BS615_12690 PF00293 NUDIX domain BS615_12700 PF04972 BON domain BS615_12705 PF02021 Uncharacterised protein family UPF0102 BS615_12710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BS615_12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_12720 PF03466 LysR substrate binding domain BS615_12725 PF01810 LysE type translocator BS615_12735 PF13411 MerR HTH family regulatory protein BS615_12745 PF01494 FAD binding domain BS615_12750 PF01494 FAD binding domain BS615_12755 PF05195 Aminopeptidase P, N-terminal domain BS615_12755 PF00557 Metallopeptidase family M24 BS615_12835 PF01464 Transglycosylase SLT domain BS615_12835 PF10145 Phage-related minor tail protein BS615_12835 PF01551 Peptidase family M23 BS615_12890 PF04860 Phage portal protein BS615_12990 PF00772 DnaB-like helicase N terminal domain BS615_12990 PF03796 DnaB-like helicase C terminal domain BS615_13010 PF01726 LexA DNA binding domain BS615_13010 PF00717 Peptidase S24-like BS615_13070 PF08019 Phosphoethanolamine transferase EptA/EptB BS615_13070 PF00884 Sulfatase BS615_13115 PF01551 Peptidase family M23 BS615_13115 PF08525 Opacity-associated protein A N-terminal motif BS615_13115 PF01476 LysM domain BS615_13445 PF01812 5-formyltetrahydrofolate cyclo-ligase family BS615_13455 PF05662 Coiled stalk of trimeric autotransporter adhesin BS615_13455 PF05658 Head domain of trimeric autotransporter adhesin BS615_13455 PF13018 Extended Signal Peptide of Type V secretion system BS615_13455 PF03895 YadA-like membrane anchor domain BS615_13460 PF02190 ATP-dependent protease La (LON) substrate-binding domain BS615_13460 PF05362 Lon protease (S16) C-terminal proteolytic domain BS615_13460 PF00004 ATPase family associated with various cellular activities (AAA) BS615_13465 PF02590 Predicted SPOUT methyltransferase BS615_13480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BS615_13480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BS615_13485 PF04060 Putative Fe-S cluster BS615_13490 PF10576 Iron-sulfur binding domain of endonuclease III BS615_13490 PF00633 Helix-hairpin-helix motif BS615_13490 PF00730 HhH-GPD superfamily base excision DNA repair protein BS615_13495 PF05191 Adenylate kinase, active site lid BS615_13510 PF03717 Penicillin-binding Protein dimerisation domain BS615_13510 PF00905 Penicillin binding protein transpeptidase domain BS615_13525 PF02492 CobW/HypB/UreG, nucleotide-binding domain BS615_13530 PF01730 UreF BS615_13535 PF05194 UreE urease accessory protein, C-terminal domain BS615_13535 PF02814 UreE urease accessory protein, N-terminal domain BS615_13540 PF01979 Amidohydrolase family BS615_13540 PF00449 Urease alpha-subunit, N-terminal domain BS615_13545 PF00699 Urease beta subunit BS615_13550 PF00547 Urease, gamma subunit BS615_13555 PF01774 UreD urease accessory protein BS615_13570 PF00463 Isocitrate lyase family BS615_13575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_13575 PF03466 LysR substrate binding domain BS615_13580 PF01595 Cyclin M transmembrane N-terminal domain BS615_13580 PF03471 Transporter associated domain BS615_13580 PF00571 CBS domain BS615_13590 PF03600 Citrate transporter BS615_13605 PF00009 Elongation factor Tu GTP binding domain BS615_13610 PF01507 Phosphoadenosine phosphosulfate reductase family BS615_13615 PF14052 Capsule assembly protein Wzi BS615_13620 PF01336 OB-fold nucleic acid binding domain BS615_13620 PF00152 tRNA synthetases class II (D, K and N) BS615_13635 PF00301 Rubredoxin BS615_13640 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_13640 PF18113 Rubredoxin binding C-terminal domain BS615_13645 PF00561 alpha/beta hydrolase fold BS615_13650 PF03466 LysR substrate binding domain BS615_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_13660 PF13090 Polyphosphate kinase C-terminal domain 2 BS615_13660 PF02503 Polyphosphate kinase middle domain BS615_13660 PF13089 Polyphosphate kinase N-terminal domain BS615_13660 PF17941 Polyphosphate kinase C-terminal domain 1 BS615_13665 PF00912 Transglycosylase BS615_13670 PF01694 Rhomboid family BS615_13680 PF00005 ABC transporter BS615_13685 PF13472 GDSL-like Lipase/Acylhydrolase family BS615_13690 PF00484 Carbonic anhydrase BS615_13695 PF00561 alpha/beta hydrolase fold BS615_13705 PF00593 TonB dependent receptor BS615_13705 PF07715 TonB-dependent Receptor Plug Domain BS615_13710 PF01521 Iron-sulphur cluster biosynthesis BS615_13710 PF01106 NifU-like domain BS615_13720 PF00884 Sulfatase BS615_13725 PF03781 Sulfatase-modifying factor enzyme 1 BS615_13740 PF00291 Pyridoxal-phosphate dependent enzyme BS615_13745 PF01384 Phosphate transporter family BS615_13750 PF00809 Pterin binding enzyme BS615_13750 PF02310 B12 binding domain BS615_13750 PF02607 B12 binding domain BS615_13750 PF02574 Homocysteine S-methyltransferase BS615_13750 PF02965 Vitamin B12 dependent methionine synthase, activation domain BS615_13755 PF02780 Transketolase, C-terminal domain BS615_13755 PF02779 Transketolase, pyrimidine binding domain BS615_13760 PF00456 Transketolase, thiamine diphosphate binding domain BS615_13765 PF07690 Major Facilitator Superfamily BS615_13775 PF03466 LysR substrate binding domain BS615_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_13790 PF01263 Aldose 1-epimerase BS615_13795 PF07690 Major Facilitator Superfamily BS615_13800 PF12833 Helix-turn-helix domain BS615_13800 PF02311 AraC-like ligand binding domain BS615_13805 PF04960 Glutaminase BS615_13810 PF01327 Polypeptide deformylase BS615_13815 PF07690 Major Facilitator Superfamily BS615_13825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BS615_13825 PF00205 Thiamine pyrophosphate enzyme, central domain BS615_13825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BS615_13830 PF00171 Aldehyde dehydrogenase family BS615_13835 PF03447 Homoserine dehydrogenase, NAD binding domain BS615_13835 PF01958 Domain of unknown function DUF108 BS615_13845 PF12697 Alpha/beta hydrolase family BS615_13855 PF07690 Major Facilitator Superfamily BS615_13860 PF14759 Reductase C-terminal BS615_13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_13865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BS615_13875 PF00355 Rieske [2Fe-2S] domain BS615_13885 PF00355 Rieske [2Fe-2S] domain BS615_13890 PF09339 IclR helix-turn-helix domain BS615_13890 PF01614 Bacterial transcriptional regulator BS615_13905 PF00378 Enoyl-CoA hydratase/isomerase BS615_13915 PF00535 Glycosyl transferase family 2 BS615_13920 PF01522 Polysaccharide deacetylase BS615_13920 PF14883 Hypothetical glycosyl hydrolase family 13 BS615_13925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BS615_13930 PF07152 YaeQ protein BS615_13935 PF00375 Sodium:dicarboxylate symporter family BS615_13940 PF02492 CobW/HypB/UreG, nucleotide-binding domain BS615_13940 PF07683 Cobalamin synthesis protein cobW C-terminal domain BS615_13950 PF03061 Thioesterase superfamily BS615_13960 PF02028 BCCT, betaine/carnitine/choline family transporter BS615_13965 PF02028 BCCT, betaine/carnitine/choline family transporter BS615_13970 PF13977 BetI-type transcriptional repressor, C-terminal BS615_13970 PF00440 Bacterial regulatory proteins, tetR family BS615_13975 PF00171 Aldehyde dehydrogenase family BS615_13980 PF00732 GMC oxidoreductase BS615_13980 PF05199 GMC oxidoreductase BS615_13985 PF06039 Malate:quinone oxidoreductase (Mqo) BS615_13995 PF02574 Homocysteine S-methyltransferase BS615_14000 PF13520 Amino acid permease BS615_14025 PF00701 Dihydrodipicolinate synthetase family BS615_14030 PF00083 Sugar (and other) transporter BS615_14150 PF02768 DNA polymerase III beta subunit, C-terminal domain BS615_14150 PF02767 DNA polymerase III beta subunit, central domain BS615_14150 PF00712 DNA polymerase III beta subunit, N-terminal domain BS615_14190 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BS615_14340 PF07007 Lysozyme inhibitor LprI BS615_14385 PF01695 IstB-like ATP binding protein BS615_14395 PF00145 C-5 cytosine-specific DNA methylase BS615_14440 PF01381 Helix-turn-helix BS615_14440 PF00717 Peptidase S24-like BS615_14475 PF00929 Exonuclease BS615_14545 PF07690 Major Facilitator Superfamily BS615_14550 PF13533 Biotin-lipoyl like BS615_14555 PF03061 Thioesterase superfamily BS615_14560 PF00490 Delta-aminolevulinic acid dehydratase BS615_14565 PF01266 FAD dependent oxidoreductase BS615_14570 PF08338 Domain of unknown function (DUF1731) BS615_14570 PF01370 NAD dependent epimerase/dehydratase family BS615_14590 PF12320 Type 5 capsule protein repressor C-terminal domain BS615_14590 PF00149 Calcineurin-like phosphoesterase BS615_14600 PF01168 Alanine racemase, N-terminal domain BS615_14605 PF00437 Type II/IV secretion system protein BS615_14610 PF00437 Type II/IV secretion system protein BS615_14615 PF01475 Ferric uptake regulator family BS615_14620 PF04355 SmpA / OmlA family BS615_14625 PF03658 RnfH family Ubiquitin BS615_14640 PF01814 Hemerythrin HHE cation binding domain BS615_14645 PF13230 Glutamine amidotransferases class-II BS615_14655 PF00696 Amino acid kinase family BS615_14660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BS615_14660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BS615_14660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BS615_14660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BS615_14665 PF00692 dUTPase BS615_14670 PF13361 UvrD-like helicase C-terminal domain BS615_14670 PF00580 UvrD/REP helicase N-terminal domain BS615_14675 PF00691 OmpA family BS615_14675 PF13488 Glycine zipper BS615_14680 PF01553 Acyltransferase BS615_14690 PF03775 Septum formation inhibitor MinC, C-terminal domain BS615_14695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BS615_14700 PF03776 Septum formation topological specificity factor MinE BS615_14720 PF01810 LysE type translocator BS615_14725 PF09397 Ftsk gamma domain BS615_14725 PF01580 FtsK/SpoIIIE family BS615_14725 PF17854 FtsK alpha domain BS615_14725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BS615_14730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BS615_14735 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BS615_14740 PF04377 Arginine-tRNA-protein transferase, C terminus BS615_14740 PF04376 Arginine-tRNA-protein transferase, N terminus BS615_14745 PF00583 Acetyltransferase (GNAT) family BS615_14760 PF03144 Elongation factor Tu domain 2 BS615_14760 PF00009 Elongation factor Tu GTP binding domain BS615_14760 PF03143 Elongation factor Tu C-terminal domain BS615_14765 PF00679 Elongation factor G C-terminus BS615_14765 PF14492 Elongation Factor G, domain II BS615_14765 PF00009 Elongation factor Tu GTP binding domain BS615_14765 PF03144 Elongation factor Tu domain 2 BS615_14765 PF03764 Elongation factor G, domain IV BS615_14770 PF00177 Ribosomal protein S7p/S5e BS615_14775 PF00164 Ribosomal protein S12/S23 BS615_14785 PF00109 Beta-ketoacyl synthase, N-terminal domain BS615_14785 PF02801 Beta-ketoacyl synthase, C-terminal domain BS615_14795 PF02678 Pirin BS615_14795 PF05726 Pirin C-terminal cupin domain BS615_14805 PF02540 NAD synthase BS615_14805 PF00795 Carbon-nitrogen hydrolase BS615_14820 PF00970 Oxidoreductase FAD-binding domain BS615_14820 PF00111 2Fe-2S iron-sulfur cluster binding domain BS615_14820 PF00175 Oxidoreductase NAD-binding domain BS615_14825 PF00171 Aldehyde dehydrogenase family BS615_14830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BS615_14830 PF00355 Rieske [2Fe-2S] domain BS615_14835 PF07859 alpha/beta hydrolase fold BS615_14840 PF02028 BCCT, betaine/carnitine/choline family transporter BS615_14845 PF00180 Isocitrate/isopropylmalate dehydrogenase BS615_14850 PF03466 LysR substrate binding domain BS615_14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_14870 PF00037 4Fe-4S binding domain BS615_14875 PF01467 Cytidylyltransferase-like BS615_14880 PF01668 SmpB protein BS615_14885 PF03358 NADPH-dependent FMN reductase BS615_14895 PF01479 S4 domain BS615_14895 PF00849 RNA pseudouridylate synthase BS615_14900 PF13525 Outer membrane lipoprotein BS615_14905 PF01807 CHC2 zinc finger BS615_14905 PF08278 DNA primase DnaG DnaB-binding BS615_14905 PF10410 DnaB-helicase binding domain of primase BS615_14905 PF08275 DNA primase catalytic core, N-terminal domain BS615_14910 PF01488 Shikimate / quinate 5-dehydrogenase BS615_14910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BS615_14910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BS615_14920 PF03550 Outer membrane lipoprotein LolB BS615_14925 PF00288 GHMP kinases N terminal domain BS615_14925 PF08544 GHMP kinases C terminal BS615_14950 PF14572 Phosphoribosyl synthetase-associated domain BS615_14950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BS615_14955 PF01386 Ribosomal L25p family BS615_14960 PF01195 Peptidyl-tRNA hydrolase BS615_14965 PF02261 Aspartate decarboxylase BS615_14980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BS615_14990 PF02581 Thiamine monophosphate synthase BS615_14990 PF03070 TENA/THI-4/PQQC family BS615_14990 PF08543 Phosphomethylpyrimidine kinase BS615_14995 PF01476 LysM domain BS615_14995 PF04972 BON domain BS615_15000 PF00550 Phosphopantetheine attachment site BS615_15010 PF00698 Acyl transferase domain BS615_15015 PF01783 Ribosomal L32p protein family BS615_15020 PF02620 Large ribosomal RNA subunit accumulation protein YceD BS615_15025 PF04315 Elongation factor P hydroxylase BS615_15030 PF01300 Telomere recombination BS615_15035 PF02616 Segregation and condensation protein ScpA BS615_15040 PF04079 Segregation and condensation complex subunit ScpB BS615_15045 PF00849 RNA pseudouridylate synthase BS615_15045 PF01479 S4 domain BS615_15060 PF00155 Aminotransferase class I and II BS615_15065 PF00202 Aminotransferase class-III BS615_15065 PF06968 Biotin and Thiamin Synthesis associated domain BS615_15065 PF04055 Radical SAM superfamily BS615_15070 PF12697 Alpha/beta hydrolase family BS615_15070 PF08241 Methyltransferase domain BS615_15075 PF02358 Trehalose-phosphatase BS615_15080 PF00982 Glycosyltransferase family 20 BS615_15085 PF07690 Major Facilitator Superfamily BS615_15090 PF00210 Ferritin-like domain BS615_15115 PF01925 Sulfite exporter TauE/SafE BS615_15125 PF03309 Type III pantothenate kinase BS615_15130 PF00448 SRP54-type protein, GTPase domain BS615_15130 PF02881 SRP54-type protein, helical bundle domain BS615_15130 PF02978 Signal peptide binding domain BS615_15140 PF01207 Dihydrouridine synthase (Dus) BS615_15170 PF00692 dUTPase BS615_15185 PF01048 Phosphorylase superfamily BS615_15195 PF10609 NUBPL iron-transfer P-loop NTPase BS615_15205 PF01588 Putative tRNA binding domain BS615_15205 PF09334 tRNA synthetases class I (M) BS615_15230 PF13533 Biotin-lipoyl like BS615_15235 PF00291 Pyridoxal-phosphate dependent enzyme BS615_15265 PF00175 Oxidoreductase NAD-binding domain BS615_15265 PF00970 Oxidoreductase FAD-binding domain BS615_15270 PF03466 LysR substrate binding domain BS615_15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_15275 PF00313 'Cold-shock' DNA-binding domain BS615_15285 PF00361 Proton-conducting membrane transporter BS615_15290 PF00361 Proton-conducting membrane transporter BS615_15295 PF00361 Proton-conducting membrane transporter BS615_15295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BS615_15300 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BS615_15305 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BS615_15310 PF12838 4Fe-4S dicluster domain BS615_15315 PF00146 NADH dehydrogenase BS615_15320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BS615_15320 PF00384 Molybdopterin oxidoreductase BS615_15320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BS615_15325 PF10531 SLBB domain BS615_15325 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BS615_15325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BS615_15335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BS615_15335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BS615_15340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BS615_15350 PF17151 Periplasmic sensor domain BS615_15350 PF00990 Diguanylate cyclase, GGDEF domain BS615_15360 PF00672 HAMP domain BS615_15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_15360 PF00512 His Kinase A (phospho-acceptor) domain BS615_15365 PF00072 Response regulator receiver domain BS615_15365 PF00486 Transcriptional regulatory protein, C terminal BS615_15375 PF00317 Ribonucleotide reductase, all-alpha domain BS615_15375 PF03477 ATP cone domain BS615_15375 PF02867 Ribonucleotide reductase, barrel domain BS615_15385 PF00268 Ribonucleotide reductase, small chain BS615_15395 PF13755 Sensor N-terminal transmembrane domain BS615_15395 PF00512 His Kinase A (phospho-acceptor) domain BS615_15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_15395 PF13756 Stimulus-sensing domain BS615_15395 PF00672 HAMP domain BS615_15465 PF13360 PQQ-like domain BS615_15465 PF01011 PQQ enzyme repeat BS615_15485 PF02567 Phenazine biosynthesis-like protein BS615_15515 PF01613 Flavin reductase like domain BS615_15520 PF01717 Cobalamin-independent synthase, Catalytic domain BS615_15520 PF08267 Cobalamin-independent synthase, N-terminal domain BS615_15530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_15530 PF03466 LysR substrate binding domain BS615_15535 PF01810 LysE type translocator BS615_15545 PF12833 Helix-turn-helix domain BS615_15545 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BS615_15550 PF07687 Peptidase dimerisation domain BS615_15550 PF01546 Peptidase family M20/M25/M40 BS615_15560 PF03466 LysR substrate binding domain BS615_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_15570 PF07690 Major Facilitator Superfamily BS615_15580 PF03466 LysR substrate binding domain BS615_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_15585 PF14537 Cytochrome c3 BS615_15585 PF00890 FAD binding domain BS615_15595 PF02515 CoA-transferase family III BS615_15600 PF07690 Major Facilitator Superfamily BS615_15605 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_15605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_15605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_15610 PF03466 LysR substrate binding domain BS615_15610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_15615 PF00107 Zinc-binding dehydrogenase BS615_15615 PF08240 Alcohol dehydrogenase GroES-like domain BS615_15620 PF00962 Adenosine/AMP deaminase BS615_15645 PF02445 Quinolinate synthetase A protein BS615_15650 PF01960 ArgJ family BS615_15655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BS615_15655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BS615_15660 PF00893 Small Multidrug Resistance protein BS615_15670 PF05275 Copper resistance protein B precursor (CopB) BS615_15675 PF00394 Multicopper oxidase BS615_15675 PF07731 Multicopper oxidase BS615_15675 PF07732 Multicopper oxidase BS615_15690 PF00834 Ribulose-phosphate 3 epimerase family BS615_15700 PF00756 Putative esterase BS615_15710 PF04445 Putative SAM-dependent methyltransferase BS615_15715 PF00814 Glycoprotease family BS615_15720 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_15725 PF00293 NUDIX domain BS615_15770 PF00425 chorismate binding enzyme BS615_15770 PF04715 Anthranilate synthase component I, N terminal region BS615_15775 PF00155 Aminotransferase class I and II BS615_15780 PF00815 Histidinol dehydrogenase BS615_15785 PF01634 ATP phosphoribosyltransferase BS615_15790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BS615_15795 PF01722 BolA-like protein BS615_15800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BS615_15805 PF04552 Sigma-54, DNA binding domain BS615_15805 PF04963 Sigma-54 factor, core binding domain BS615_15805 PF00309 Sigma-54 factor, Activator interacting domain (AID) BS615_15850 PF00795 Carbon-nitrogen hydrolase BS615_15860 PF01047 MarR family BS615_15865 PF02566 OsmC-like protein BS615_15870 PF00437 Type II/IV secretion system protein BS615_15890 PF01367 5'-3' exonuclease, C-terminal SAM fold BS615_15890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BS615_15890 PF00476 DNA polymerase family A BS615_15890 PF01612 3'-5' exonuclease BS615_15895 PF02325 YGGT family BS615_15900 PF03807 NADP oxidoreductase coenzyme F420-dependent BS615_15900 PF14748 Pyrroline-5-carboxylate reductase dimerisation BS615_15905 PF09179 TilS substrate binding domain BS615_15905 PF11734 TilS substrate C-terminal domain BS615_15905 PF01171 PP-loop family BS615_15910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BS615_15915 PF02541 Ppx/GppA phosphatase family BS615_15920 PF00085 Thioredoxin BS615_15925 PF07497 Rho termination factor, RNA-binding domain BS615_15925 PF07498 Rho termination factor, N-terminal domain BS615_15925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BS615_15935 PF00216 Bacterial DNA-binding protein BS615_15940 PF03147 Ferredoxin-fold anticodon binding domain BS615_15940 PF03484 tRNA synthetase B5 domain BS615_15940 PF03483 B3/4 domain BS615_15940 PF01588 Putative tRNA binding domain BS615_15940 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BS615_15945 PF01409 tRNA synthetases class II core domain (F) BS615_15945 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BS615_15965 PF00453 Ribosomal protein L20 BS615_15970 PF01632 Ribosomal protein L35 BS615_15980 PF07690 Major Facilitator Superfamily BS615_15985 PF09335 SNARE associated Golgi protein BS615_15990 PF00043 Glutathione S-transferase, C-terminal domain BS615_15990 PF02798 Glutathione S-transferase, N-terminal domain BS615_16000 PF00707 Translation initiation factor IF-3, C-terminal domain BS615_16000 PF05198 Translation initiation factor IF-3, N-terminal domain BS615_16005 PF02824 TGS domain BS615_16005 PF03129 Anticodon binding domain BS615_16005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BS615_16005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BS615_16010 PF13193 AMP-binding enzyme C-terminal domain BS615_16010 PF00501 AMP-binding enzyme BS615_16015 PF04751 Protein of unknown function (DUF615) BS615_16020 PF00381 PTS HPr component phosphorylation site BS615_16025 PF03668 P-loop ATPase protein family BS615_16030 PF02569 Pantoate-beta-alanine ligase BS615_16035 PF02548 Ketopantoate hydroxymethyltransferase BS615_16040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BS615_16045 PF01743 Poly A polymerase head domain BS615_16045 PF12627 Probable RNA and SrmB- binding site of polymerase A BS615_16045 PF12626 Polymerase A arginine-rich C-terminus BS615_16055 PF03819 MazG nucleotide pyrophosphohydrolase domain BS615_16065 PF13291 ACT domain BS615_16065 PF02824 TGS domain BS615_16065 PF04607 Region found in RelA / SpoT proteins BS615_16070 PF05958 tRNA (Uracil-5-)-methyltransferase BS615_16080 PF00291 Pyridoxal-phosphate dependent enzyme BS615_16085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BS615_16085 PF00072 Response regulator receiver domain BS615_16085 PF00672 HAMP domain BS615_16085 PF01627 Hpt domain BS615_16085 PF00512 His Kinase A (phospho-acceptor) domain BS615_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_16090 PF00378 Enoyl-CoA hydratase/isomerase BS615_16095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BS615_16095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BS615_16100 PF01261 Xylose isomerase-like TIM barrel BS615_16110 PF00106 short chain dehydrogenase BS615_16115 PF02233 NAD(P) transhydrogenase beta subunit BS615_16120 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BS615_16125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BS615_16125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BS615_16130 PF00892 EamA-like transporter family BS615_16140 PF07690 Major Facilitator Superfamily BS615_16145 PF01207 Dihydrouridine synthase (Dus) BS615_16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_16155 PF03466 LysR substrate binding domain BS615_16170 PF00899 ThiF family BS615_16180 PF00694 Aconitase C-terminal domain BS615_16180 PF00330 Aconitase family (aconitate hydratase) BS615_16185 PF01026 TatD related DNase BS615_16200 PF00009 Elongation factor Tu GTP binding domain BS615_16200 PF03144 Elongation factor Tu domain 2 BS615_16200 PF16658 Class II release factor RF3, C-terminal domain BS615_16225 PF00563 EAL domain BS615_16225 PF03707 Bacterial signalling protein N terminal repeat BS615_16225 PF00990 Diguanylate cyclase, GGDEF domain BS615_16230 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BS615_16230 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BS615_16235 PF10369 Small subunit of acetolactate synthase BS615_16240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BS615_16240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BS615_16240 PF00205 Thiamine pyrophosphate enzyme, central domain BS615_16255 PF00133 tRNA synthetases class I (I, L, M and V) BS615_16255 PF08264 Anticodon-binding domain of tRNA BS615_16255 PF13603 Leucyl-tRNA synthetase, Domain 2 BS615_16255 PF09334 tRNA synthetases class I (M) BS615_16270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BS615_16275 PF02687 FtsX-like permease family BS615_16275 PF00005 ABC transporter BS615_16275 PF12704 MacB-like periplasmic core domain BS615_16280 PF02321 Outer membrane efflux protein BS615_16295 PF00929 Exonuclease BS615_16300 PF03193 RsgA GTPase BS615_16310 PF00462 Glutaredoxin BS615_16315 PF02556 Preprotein translocase subunit SecB BS615_16330 PF00109 Beta-ketoacyl synthase, N-terminal domain BS615_16330 PF02801 Beta-ketoacyl synthase, C-terminal domain BS615_16355 PF04820 Tryptophan halogenase BS615_16375 PF00221 Aromatic amino acid lyase BS615_16390 PF00501 AMP-binding enzyme BS615_16390 PF13193 AMP-binding enzyme C-terminal domain BS615_16400 PF00550 Phosphopantetheine attachment site BS615_16405 PF00550 Phosphopantetheine attachment site BS615_16420 PF01926 50S ribosome-binding GTPase BS615_16420 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BS615_16425 PF13360 PQQ-like domain BS615_16435 PF13393 Histidyl-tRNA synthetase BS615_16435 PF03129 Anticodon binding domain BS615_16440 PF04551 GcpE protein BS615_16445 PF13464 Domain of unknown function (DUF4115) BS615_16455 PF04055 Radical SAM superfamily BS615_16460 PF00334 Nucleoside diphosphate kinase BS615_16465 PF04384 Iron-sulphur cluster assembly BS615_16470 PF01569 PAP2 superfamily BS615_16475 PF00534 Glycosyl transferases group 1 BS615_16475 PF13439 Glycosyltransferase Family 4 BS615_16480 PF00595 PDZ domain BS615_16480 PF03572 Peptidase family S41 BS615_16480 PF11818 C-terminal domain of tail specific protease (DUF3340) BS615_16480 PF17804 Tail specific protease N-terminal domain BS615_16485 PF00933 Glycosyl hydrolase family 3 N terminal domain BS615_16495 PF00561 alpha/beta hydrolase fold BS615_16500 PF00171 Aldehyde dehydrogenase family BS615_16505 PF00171 Aldehyde dehydrogenase family BS615_16510 PF01202 Shikimate kinase BS615_16515 PF02447 GntP family permease BS615_16520 PF01081 KDPG and KHG aldolase BS615_16525 PF00920 Dehydratase family BS615_16530 PF00871 Acetokinase family BS615_16535 PF07085 DRTGG domain BS615_16535 PF01515 Phosphate acetyl/butaryl transferase BS615_16540 PF05683 Fumarase C-terminus BS615_16540 PF05681 Fumarate hydratase (Fumerase) BS615_16555 PF07724 AAA domain (Cdc48 subfamily) BS615_16555 PF06689 ClpX C4-type zinc finger BS615_16555 PF10431 C-terminal, D2-small domain, of ClpB protein BS615_16560 PF00574 Clp protease BS615_16565 PF05698 Bacterial trigger factor protein (TF) C-terminus BS615_16565 PF05697 Bacterial trigger factor protein (TF) BS615_16565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BS615_16570 PF00593 TonB dependent receptor BS615_16570 PF07715 TonB-dependent Receptor Plug Domain BS615_16575 PF18331 PKHD-type hydroxylase C-terminal domain BS615_16575 PF13640 2OG-Fe(II) oxygenase superfamily BS615_16580 PF00682 HMGL-like BS615_16580 PF08502 LeuA allosteric (dimerisation) domain BS615_16585 PF00561 alpha/beta hydrolase fold BS615_16590 PF00561 alpha/beta hydrolase fold BS615_16590 PF07021 Methionine biosynthesis protein MetW BS615_16600 PF01725 Ham1 family BS615_16610 PF02416 mttA/Hcf106 family BS615_16615 PF02416 mttA/Hcf106 family BS615_16620 PF00902 Sec-independent protein translocase protein (TatC) BS615_16655 PF00303 Thymidylate synthase BS615_16660 PF00186 Dihydrofolate reductase BS615_16670 PF01625 Peptide methionine sulfoxide reductase BS615_16680 PF01618 MotA/TolQ/ExbB proton channel family BS615_16690 PF00551 Formyl transferase BS615_16690 PF01842 ACT domain BS615_16700 PF00171 Aldehyde dehydrogenase family BS615_16705 PF00830 Ribosomal L28 family BS615_16710 PF00471 Ribosomal protein L33 BS615_16715 PF02254 TrkA-N domain BS615_16715 PF00999 Sodium/hydrogen exchanger family BS615_16735 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BS615_16740 PF00580 UvrD/REP helicase N-terminal domain BS615_16740 PF13361 UvrD-like helicase C-terminal domain BS615_16755 PF01396 Topoisomerase DNA binding C4 zinc finger BS615_16755 PF01751 Toprim domain BS615_16755 PF01131 DNA topoisomerase BS615_16755 PF08272 Topoisomerase I zinc-ribbon-like BS615_16765 PF01638 HxlR-like helix-turn-helix BS615_16770 PF00107 Zinc-binding dehydrogenase BS615_16770 PF08240 Alcohol dehydrogenase GroES-like domain BS615_16785 PF01810 LysE type translocator BS615_16790 PF03279 Bacterial lipid A biosynthesis acyltransferase BS615_16800 PF00375 Sodium:dicarboxylate symporter family BS615_16810 PF02774 Semialdehyde dehydrogenase, dimerisation domain BS615_16810 PF01118 Semialdehyde dehydrogenase, NAD binding domain BS615_16830 PF01416 tRNA pseudouridine synthase BS615_16840 PF01176 Translation initiation factor 1A / IF-1 BS615_16855 PF00180 Isocitrate/isopropylmalate dehydrogenase BS615_16865 PF00694 Aconitase C-terminal domain BS615_16870 PF00330 Aconitase family (aconitate hydratase) BS615_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_16880 PF03466 LysR substrate binding domain BS615_16900 PF00293 NUDIX domain BS615_16905 PF02896 PEP-utilising enzyme, TIM barrel domain BS615_16905 PF00391 PEP-utilising enzyme, mobile domain BS615_16905 PF01590 GAF domain BS615_16905 PF05524 PEP-utilising enzyme, N-terminal BS615_16910 PF00141 Peroxidase BS615_16915 PF12706 Beta-lactamase superfamily domain BS615_16920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_16920 PF03466 LysR substrate binding domain BS615_16930 PF02798 Glutathione S-transferase, N-terminal domain BS615_16935 PF08279 HTH domain BS615_16935 PF13280 WYL domain BS615_16940 PF13419 Haloacid dehalogenase-like hydrolase BS615_16945 PF00849 RNA pseudouridylate synthase BS615_16945 PF01479 S4 domain BS615_16955 PF10150 Ribonuclease E/G family BS615_16955 PF12111 Polyribonucleotide phosphorylase C terminal BS615_16955 PF00575 S1 RNA binding domain BS615_16960 PF00501 AMP-binding enzyme BS615_16960 PF13193 AMP-binding enzyme C-terminal domain BS615_16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_16975 PF03466 LysR substrate binding domain BS615_16980 PF00106 short chain dehydrogenase BS615_16985 PF06969 HemN C-terminal domain BS615_16985 PF04055 Radical SAM superfamily BS615_16995 PF01554 MatE BS615_17000 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_17000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_17000 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BS615_17005 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BS615_17005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_17010 PF03109 ABC1 family BS615_17015 PF01197 Ribosomal protein L31 BS615_17025 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BS615_17045 PF03884 DNA gyrase inhibitor YacG BS615_17050 PF00753 Metallo-beta-lactamase superfamily BS615_17055 PF00762 Ferrochelatase BS615_17065 PF01177 Asp/Glu/Hydantoin racemase BS615_17080 PF01206 Sulfurtransferase TusA BS615_17085 PF00571 CBS domain BS615_17085 PF03471 Transporter associated domain BS615_17090 PF00795 Carbon-nitrogen hydrolase BS615_17095 PF01588 Putative tRNA binding domain BS615_17105 PF07963 Prokaryotic N-terminal methylation motif BS615_17105 PF08334 Type II secretion system (T2SS), protein G BS615_17110 PF00482 Type II secretion system (T2SS), protein F BS615_17115 PF17764 3′ DNA-binding domain (3′BD) BS615_17115 PF00270 DEAD/DEAH box helicase BS615_17115 PF00271 Helicase conserved C-terminal domain BS615_17115 PF18074 Primosomal protein N C-terminal domain BS615_17115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BS615_17120 PF00999 Sodium/hydrogen exchanger family BS615_17120 PF02254 TrkA-N domain BS615_17125 PF01430 Hsp33 protein BS615_17135 PF00226 DnaJ domain BS615_17135 PF01556 DnaJ C terminal domain BS615_17145 PF01544 CorA-like Mg2+ transporter protein BS615_17150 PF03725 3' exoribonuclease family, domain 2 BS615_17150 PF00013 KH domain BS615_17150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BS615_17150 PF01138 3' exoribonuclease family, domain 1 BS615_17150 PF00575 S1 RNA binding domain BS615_17155 PF00312 Ribosomal protein S15 BS615_17165 PF13538 UvrD-like helicase C-terminal domain BS615_17170 PF13361 UvrD-like helicase C-terminal domain BS615_17170 PF12705 PD-(D/E)XK nuclease superfamily BS615_17170 PF00580 UvrD/REP helicase N-terminal domain BS615_17175 PF17946 RecC C-terminal domain BS615_17185 PF03976 Polyphosphate kinase 2 (PPK2) BS615_17195 PF01209 ubiE/COQ5 methyltransferase family BS615_17205 PF03109 ABC1 family BS615_17210 PF01494 FAD binding domain BS615_17215 PF01502 Phosphoribosyl-AMP cyclohydrolase BS615_17230 PF13244 Domain of unknown function (DUF4040) BS615_17230 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BS615_17230 PF00361 Proton-conducting membrane transporter BS615_17230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BS615_17235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BS615_17240 PF00361 Proton-conducting membrane transporter BS615_17250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BS615_17260 PF02033 Ribosome-binding factor A BS615_17265 PF00009 Elongation factor Tu GTP binding domain BS615_17265 PF08364 Bacterial translation initiation factor IF-2 associated region BS615_17265 PF04760 Translation initiation factor IF-2, N-terminal region BS615_17265 PF11987 Translation-initiation factor 2 BS615_17270 PF13184 NusA-like KH domain BS615_17270 PF00575 S1 RNA binding domain BS615_17270 PF08529 NusA N-terminal domain BS615_17275 PF17384 RimP C-terminal SH3 domain BS615_17275 PF02576 RimP N-terminal domain BS615_17295 PF03840 Preprotein translocase SecG subunit BS615_17300 PF00121 Triosephosphate isomerase BS615_17305 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BS615_17305 PF00437 Type II/IV secretion system protein BS615_17310 PF00482 Type II secretion system (T2SS), protein F BS615_17315 PF01478 Type IV leader peptidase family BS615_17315 PF06750 Bacterial Peptidase A24 N-terminal domain BS615_17320 PF01121 Dephospho-CoA kinase BS615_17330 PF00588 SpoU rRNA Methylase family BS615_17330 PF08032 RNA 2'-O ribose methyltransferase substrate binding BS615_17335 PF06865 Pyrimidine/purine nucleoside phosphorylase BS615_17345 PF02463 RecF/RecN/SMC N terminal domain BS615_17350 PF02622 Uncharacterized ACR, COG1678 BS615_17355 PF03652 Holliday junction resolvase BS615_17360 PF13533 Biotin-lipoyl like BS615_17385 PF02805 Metal binding domain of Ada BS615_17385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BS615_17385 PF12833 Helix-turn-helix domain BS615_17385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BS615_17390 PF01066 CDP-alcohol phosphatidyltransferase BS615_17400 PF02151 UvrB/uvrC motif BS615_17400 PF01541 GIY-YIG catalytic domain BS615_17400 PF08459 UvrC Helix-hairpin-helix N-terminal BS615_17420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BS615_17420 PF00378 Enoyl-CoA hydratase/isomerase BS615_17420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BS615_17425 PF02803 Thiolase, C-terminal domain BS615_17425 PF00108 Thiolase, N-terminal domain BS615_17445 PF00376 MerR family regulatory protein BS615_17445 PF09278 MerR, DNA binding BS615_17455 PF01323 DSBA-like thioredoxin domain BS615_17470 PF00183 Hsp90 protein BS615_17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_17485 PF13726 Na+-H+ antiporter family BS615_17485 PF03553 Na+/H+ antiporter family BS615_17490 PF00561 alpha/beta hydrolase fold BS615_17510 PF04997 RNA polymerase Rpb1, domain 1 BS615_17510 PF00623 RNA polymerase Rpb1, domain 2 BS615_17510 PF05000 RNA polymerase Rpb1, domain 4 BS615_17510 PF04983 RNA polymerase Rpb1, domain 3 BS615_17510 PF04998 RNA polymerase Rpb1, domain 5 BS615_17515 PF00562 RNA polymerase Rpb2, domain 6 BS615_17515 PF10385 RNA polymerase beta subunit external 1 domain BS615_17515 PF04560 RNA polymerase Rpb2, domain 7 BS615_17515 PF04565 RNA polymerase Rpb2, domain 3 BS615_17515 PF04561 RNA polymerase Rpb2, domain 2 BS615_17515 PF04563 RNA polymerase beta subunit BS615_17520 PF16320 Ribosomal protein L7/L12 dimerisation domain BS615_17520 PF00542 Ribosomal protein L7/L12 C-terminal domain BS615_17525 PF00466 Ribosomal protein L10 BS615_17530 PF00687 Ribosomal protein L1p/L10e family BS615_17535 PF00298 Ribosomal protein L11, RNA binding domain BS615_17535 PF03946 Ribosomal protein L11, N-terminal domain BS615_17540 PF00467 KOW motif BS615_17540 PF02357 Transcription termination factor nusG BS615_17545 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BS615_17555 PF03144 Elongation factor Tu domain 2 BS615_17555 PF03143 Elongation factor Tu C-terminal domain BS615_17555 PF00009 Elongation factor Tu GTP binding domain BS615_17580 PF00425 chorismate binding enzyme BS615_17580 PF04715 Anthranilate synthase component I, N terminal region BS615_17585 PF13419 Haloacid dehalogenase-like hydrolase BS615_17590 PF00498 FHA domain BS615_17590 PF12401 Protein of unknown function (DUF2662) BS615_17595 PF00263 Bacterial type II and III secretion system protein BS615_17595 PF03958 Bacterial type II/III secretion system short domain BS615_17610 PF00816 H-NS histone family BS615_17635 PF03900 Porphobilinogen deaminase, C-terminal domain BS615_17635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BS615_17640 PF00072 Response regulator receiver domain BS615_17640 PF04397 LytTr DNA-binding domain BS615_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_17645 PF07694 5TMR of 5TMR-LYT BS615_17645 PF06580 Histidine kinase BS615_17650 PF00206 Lyase BS615_17650 PF14698 Argininosuccinate lyase C-terminal BS615_17655 PF04362 Bacterial Fe(2+) trafficking BS615_17660 PF01895 PhoU domain BS615_17665 PF02321 Outer membrane efflux protein BS615_17670 PF00892 EamA-like transporter family BS615_17685 PF13667 ThiC-associated domain BS615_17685 PF01964 Radical SAM ThiC family BS615_17690 PF00293 NUDIX domain BS615_17695 PF00149 Calcineurin-like phosphoesterase BS615_17700 PF01258 Prokaryotic dksA/traR C4-type zinc finger BS615_17705 PF00749 tRNA synthetases class I (E and Q), catalytic domain BS615_17710 PF01098 Cell cycle protein BS615_17715 PF08245 Mur ligase middle domain BS615_17715 PF02875 Mur ligase family, glutamate ligase domain BS615_17725 PF07664 Ferrous iron transport protein B C terminus BS615_17725 PF02421 Ferrous iron transport protein B BS615_17725 PF07670 Nucleoside recognition BS615_17735 PF02899 Phage integrase, N-terminal SAM-like domain BS615_17735 PF00589 Phage integrase family BS615_17740 PF10411 Disulfide bond isomerase protein N-terminus BS615_17740 PF13098 Thioredoxin-like domain BS615_17745 PF01842 ACT domain BS615_17745 PF00742 Homoserine dehydrogenase BS615_17745 PF03447 Homoserine dehydrogenase, NAD binding domain BS615_17750 PF00291 Pyridoxal-phosphate dependent enzyme BS615_17755 PF00768 D-alanyl-D-alanine carboxypeptidase BS615_17760 PF00072 Response regulator receiver domain BS615_17760 PF00196 Bacterial regulatory proteins, luxR family BS615_17765 PF00512 His Kinase A (phospho-acceptor) domain BS615_17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BS615_17770 PF02954 Bacterial regulatory protein, Fis family BS615_17770 PF00072 Response regulator receiver domain BS615_17770 PF00158 Sigma-54 interaction domain BS615_17775 PF03572 Peptidase family S41 BS615_17775 PF00595 PDZ domain BS615_17780 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BS615_17780 PF01676 Metalloenzyme superfamily BS615_17785 PF03739 Lipopolysaccharide export system permease LptF/LptG BS615_17795 PF00883 Cytosol aminopeptidase family, catalytic domain BS615_17795 PF02789 Cytosol aminopeptidase family, N-terminal domain BS615_17815 PF00677 Lumazine binding domain BS615_17825 PF01872 RibD C-terminal domain BS615_17825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BS615_17830 PF03477 ATP cone domain BS615_17835 PF00909 Ammonium Transporter Family BS615_17840 PF00543 Nitrogen regulatory protein P-II BS615_17860 PF01636 Phosphotransferase enzyme family BS615_17865 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BS615_17890 PF00440 Bacterial regulatory proteins, tetR family BS615_17890 PF02909 Tetracyclin repressor-like, C-terminal domain BS615_17895 PF07690 Major Facilitator Superfamily BS615_17905 PF00916 Sulfate permease family BS615_17905 PF01740 STAS domain BS615_17910 PF00582 Universal stress protein family BS615_17955 PF00665 Integrase core domain BS615_17970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BS615_17970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BS615_17970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BS615_17970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BS615_17975 PF00809 Pterin binding enzyme BS615_18000 PF00665 Integrase core domain BS615_18025 PF00589 Phage integrase family BS615_18025 PF02899 Phage integrase, N-terminal SAM-like domain BS615_18055 PF00916 Sulfate permease family BS615_18055 PF01740 STAS domain BS615_18060 PF00582 Universal stress protein family BS615_18080 PF00665 Integrase core domain BS615_18095 PF00392 Bacterial regulatory proteins, gntR family BS615_18095 PF00155 Aminotransferase class I and II BS615_18105 PF00701 Dihydrodipicolinate synthetase family BS615_18115 PF03573 outer membrane porin, OprD family BS615_18120 PF00719 Inorganic pyrophosphatase BS615_18135 PF13193 AMP-binding enzyme C-terminal domain BS615_18135 PF00501 AMP-binding enzyme BS615_18140 PF03989 DNA gyrase C-terminal domain, beta-propeller BS615_18140 PF00521 DNA gyrase/topoisomerase IV, subunit A BS615_18145 PF07690 Major Facilitator Superfamily BS615_18150 PF03458 UPF0126 domain BS615_18155 PF02810 SEC-C motif BS615_18160 PF03471 Transporter associated domain BS615_18160 PF03741 Integral membrane protein TerC family BS615_18165 PF03641 Possible lysine decarboxylase BS615_18170 PF07690 Major Facilitator Superfamily BS615_18180 PF11798 IMS family HHH motif BS615_18180 PF11799 impB/mucB/samB family C-terminal domain BS615_18180 PF00817 impB/mucB/samB family BS615_18195 PF08497 Radical SAM N-terminal BS615_18195 PF04055 Radical SAM superfamily BS615_18195 PF11842 Domain of unknown function (DUF3362) BS615_18215 PF03358 NADPH-dependent FMN reductase BS615_18225 PF00291 Pyridoxal-phosphate dependent enzyme BS615_18260 PF00440 Bacterial regulatory proteins, tetR family BS615_18285 PF01327 Polypeptide deformylase BS615_18295 PF17782 DprA winged helix domain BS615_18295 PF02481 DNA recombination-mediator protein A BS615_18300 PF01300 Telomere recombination BS615_18305 PF00892 EamA-like transporter family BS615_18310 PF00440 Bacterial regulatory proteins, tetR family BS615_18315 PF07690 Major Facilitator Superfamily BS615_18325 PF00255 Glutathione peroxidase BS615_18335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BS615_18340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BS615_18340 PF02874 ATP synthase alpha/beta family, beta-barrel domain BS615_18345 PF00231 ATP synthase BS615_18350 PF02874 ATP synthase alpha/beta family, beta-barrel domain BS615_18350 PF00306 ATP synthase alpha/beta chain, C terminal domain BS615_18350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BS615_18355 PF00213 ATP synthase delta (OSCP) subunit BS615_18360 PF00430 ATP synthase B/B' CF(0) BS615_18365 PF00137 ATP synthase subunit C BS615_18370 PF00119 ATP synthase A chain BS615_18395 PF00905 Penicillin binding protein transpeptidase domain BS615_18415 PF13614 AAA domain BS615_18475 PF10544 T5orf172 domain BS615_18520 PF13614 AAA domain BS615_18525 PF10544 T5orf172 domain BS615_18550 PF00905 Penicillin binding protein transpeptidase domain BS615_18570 PF13614 AAA domain BS615_18575 PF10544 T5orf172 domain BS615_18620 PF13614 AAA domain BS615_18625 PF10544 T5orf172 domain BS615_18655 PF00005 ABC transporter BS615_18660 PF00950 ABC 3 transport family BS615_18665 PF01810 LysE type translocator BS615_18670 PF04261 Dyp-type peroxidase family BS615_18680 PF00390 Malic enzyme, N-terminal domain BS615_18680 PF03949 Malic enzyme, NAD binding domain BS615_18685 PF00750 tRNA synthetases class I (R) BS615_18685 PF05746 DALR anticodon binding domain BS615_18685 PF03485 Arginyl tRNA synthetase N terminal domain BS615_18705 PF05726 Pirin C-terminal cupin domain BS615_18705 PF02678 Pirin BS615_18715 PF03551 Transcriptional regulator PadR-like family BS615_18720 PF01909 Nucleotidyltransferase domain BS615_18720 PF13427 Domain of unknown function (DUF4111) BS615_18725 PF00958 GMP synthase C terminal domain BS615_18725 PF00117 Glutamine amidotransferase class-I BS615_18725 PF02540 NAD synthase BS615_18730 PF04286 Protein of unknown function (DUF445) BS615_18735 PF07681 DoxX BS615_18740 PF09335 SNARE associated Golgi protein BS615_18755 PF13614 AAA domain BS615_18765 PF01722 BolA-like protein BS615_18780 PF01648 4'-phosphopantetheinyl transferase superfamily BS615_18785 PF12697 Alpha/beta hydrolase family BS615_18805 PF00975 Thioesterase domain BS615_18805 PF14765 Polyketide synthase dehydratase BS615_18805 PF16197 Ketoacyl-synthetase C-terminal extension BS615_18805 PF00109 Beta-ketoacyl synthase, N-terminal domain BS615_18805 PF00550 Phosphopantetheine attachment site BS615_18805 PF08242 Methyltransferase domain BS615_18805 PF02801 Beta-ketoacyl synthase, C-terminal domain BS615_18810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_18810 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_18810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_18815 PF00501 AMP-binding enzyme BS615_18820 PF03472 Autoinducer binding domain BS615_18820 PF00196 Bacterial regulatory proteins, luxR family BS615_18830 PF00765 Autoinducer synthase BS615_18835 PF00083 Sugar (and other) transporter BS615_18835 PF07690 Major Facilitator Superfamily BS615_18840 PF00378 Enoyl-CoA hydratase/isomerase BS615_18845 PF00378 Enoyl-CoA hydratase/isomerase BS615_18850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BS615_18850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BS615_18850 PF02770 Acyl-CoA dehydrogenase, middle domain BS615_18855 PF00501 AMP-binding enzyme BS615_18855 PF13193 AMP-binding enzyme C-terminal domain BS615_18860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BS615_18860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BS615_18865 PF00171 Aldehyde dehydrogenase family BS615_18875 PF00324 Amino acid permease BS615_18880 PF00324 Amino acid permease BS615_18885 PF01042 Endoribonuclease L-PSP BS615_18890 PF01168 Alanine racemase, N-terminal domain BS615_18890 PF00842 Alanine racemase, C-terminal domain BS615_18895 PF01266 FAD dependent oxidoreductase BS615_18900 PF01037 Lrp/AsnC ligand binding domain BS615_18910 PF00593 TonB dependent receptor BS615_18910 PF07715 TonB-dependent Receptor Plug Domain BS615_18925 PF00849 RNA pseudouridylate synthase BS615_18940 PF00440 Bacterial regulatory proteins, tetR family BS615_18940 PF08361 MAATS-type transcriptional repressor, C-terminal region BS615_18950 PF02801 Beta-ketoacyl synthase, C-terminal domain BS615_18950 PF00109 Beta-ketoacyl synthase, N-terminal domain BS615_18990 PF00330 Aconitase family (aconitate hydratase) BS615_18990 PF00694 Aconitase C-terminal domain BS615_18995 PF00285 Citrate synthase, C-terminal domain BS615_19005 PF00392 Bacterial regulatory proteins, gntR family BS615_19005 PF07729 FCD domain BS615_19015 PF01565 FAD binding domain BS615_19015 PF09330 D-lactate dehydrogenase, membrane binding BS615_19020 PF01070 FMN-dependent dehydrogenase BS615_19025 PF07729 FCD domain BS615_19025 PF00392 Bacterial regulatory proteins, gntR family BS615_19030 PF02652 L-lactate permease BS615_19035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BS615_19035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BS615_19035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BS615_19035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BS615_19040 PF16363 GDP-mannose 4,6 dehydratase BS615_19045 PF00342 Phosphoglucose isomerase BS615_19050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BS615_19050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BS615_19050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BS615_19055 PF00483 Nucleotidyl transferase BS615_19060 PF02719 Polysaccharide biosynthesis protein BS615_19065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BS615_19070 PF00132 Bacterial transferase hexapeptide (six repeats) BS615_19070 PF14602 Hexapeptide repeat of succinyl-transferase BS615_19070 PF17836 PglD N-terminal domain BS615_19075 PF02397 Bacterial sugar transferase BS615_19080 PF13439 Glycosyltransferase Family 4 BS615_19080 PF00534 Glycosyl transferases group 1 BS615_19085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BS615_19085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BS615_19085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BS615_19100 PF00535 Glycosyl transferase family 2 BS615_19105 PF04230 Polysaccharide pyruvyl transferase BS615_19115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BS615_19115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BS615_19115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BS615_19120 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BS615_19120 PF02563 Polysaccharide biosynthesis/export protein BS615_19120 PF10531 SLBB domain BS615_19125 PF01451 Low molecular weight phosphotyrosine protein phosphatase BS615_19130 PF13614 AAA domain BS615_19130 PF13807 G-rich domain on putative tyrosine kinase BS615_19130 PF02706 Chain length determinant protein BS615_19135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BS615_19135 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BS615_19140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BS615_19140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BS615_19145 PF03023 Lipid II flippase MurJ BS615_19150 PF01510 N-acetylmuramoyl-L-alanine amidase BS615_19155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BS615_19155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BS615_19165 PF04185 Phosphoesterase family BS615_19165 PF05506 Domain of unknown function (DUF756) BS615_19170 PF01138 3' exoribonuclease family, domain 1 BS615_19170 PF03725 3' exoribonuclease family, domain 2 BS615_19175 PF00487 Fatty acid desaturase BS615_19180 PF00175 Oxidoreductase NAD-binding domain BS615_19185 PF00440 Bacterial regulatory proteins, tetR family BS615_19190 PF00440 Bacterial regulatory proteins, tetR family BS615_19190 PF08360 QacR-like protein, C-terminal region BS615_19195 PF01323 DSBA-like thioredoxin domain BS615_19205 PF13419 Haloacid dehalogenase-like hydrolase BS615_19210 PF00106 short chain dehydrogenase BS615_19225 PF00696 Amino acid kinase family BS615_19225 PF00583 Acetyltransferase (GNAT) family BS615_19230 PF09084 NMT1/THI5 like BS615_19235 PF09084 NMT1/THI5 like BS615_19240 PF00296 Luciferase-like monooxygenase BS615_19245 PF00528 Binding-protein-dependent transport system inner membrane component BS615_19250 PF00005 ABC transporter BS615_19255 PF08362 YcdC-like protein, C-terminal region BS615_19255 PF00440 Bacterial regulatory proteins, tetR family BS615_19260 PF01048 Phosphorylase superfamily BS615_19270 PF01687 Riboflavin kinase BS615_19270 PF06574 FAD synthetase BS615_19275 PF06827 Zinc finger found in FPG and IleRS BS615_19275 PF00133 tRNA synthetases class I (I, L, M and V) BS615_19275 PF08264 Anticodon-binding domain of tRNA BS615_19280 PF01252 Signal peptidase (SPase) II BS615_19285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BS615_19325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BS615_19330 PF07859 alpha/beta hydrolase fold BS615_19350 PF03466 LysR substrate binding domain BS615_19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BS615_19355 PF01025 GrpE BS615_19360 PF00012 Hsp70 protein BS615_19380 PF13406 Transglycosylase SLT domain BS615_19385 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BS615_19385 PF02222 ATP-grasp domain BS615_19390 PF00731 AIR carboxylase BS615_19405 PF02875 Mur ligase family, glutamate ligase domain BS615_19405 PF01225 Mur ligase family, catalytic domain BS615_19405 PF08245 Mur ligase middle domain BS615_19415 PF01569 PAP2 superfamily BS615_19420 PF03741 Integral membrane protein TerC family BS615_19430 PF03738 Glutathionylspermidine synthase preATP-grasp BS615_19435 PF00355 Rieske [2Fe-2S] domain BS615_19440 PF01979 Amidohydrolase family BS615_19450 PF00156 Phosphoribosyl transferase domain BS615_19460 PF10411 Disulfide bond isomerase protein N-terminus BS615_19460 PF13098 Thioredoxin-like domain BS615_19465 PF01545 Cation efflux family BS615_19465 PF16916 Dimerisation domain of Zinc Transporter BS615_19470 PF02583 Metal-sensitive transcriptional repressor BS615_19475 PF01926 50S ribosome-binding GTPase BS615_19475 PF10396 GTP-binding protein TrmE N-terminus BS615_19475 PF12631 MnmE helical domain BS615_19480 PF02096 60Kd inner membrane protein BS615_19480 PF14849 YidC periplasmic domain BS615_19485 PF01809 Putative membrane protein insertion efficiency factor BS615_19490 PF00825 Ribonuclease P BS615_19495 PF00468 Ribosomal protein L34 BS615_19560 PF00239 Resolvase, N terminal domain BS615_19560 PF02796 Helix-turn-helix domain of resolvase BS615_19625 PF18272 single-stranded DNA binding TraI N-terminal subdomain BS615_19625 PF18340 DNA relaxase TraI 2B/2B-like domain BS615_19625 PF07057 DNA helicase TraI BS615_19625 PF08751 TrwC relaxase BS615_19650 PF00684 DnaJ central domain BS615_19650 PF00226 DnaJ domain BS615_19650 PF01556 DnaJ C terminal domain BS615_19750 PF13614 AAA domain BS615_19805 PF00816 H-NS histone family BS615_19820 PF00565 Staphylococcal nuclease homologue BS615_19880 PF00817 impB/mucB/samB family BS615_19880 PF11799 impB/mucB/samB family C-terminal domain BS615_19880 PF13438 Domain of unknown function (DUF4113) BS615_19900 PF06122 Conjugative relaxosome accessory transposon protein BS615_19910 PF06986 Type-1V conjugative transfer system mating pair stabilisation BS615_19920 PF06834 TraU protein