locus-tag class description AYR70_00005 PF11638 DnaA N-terminal domain AYR70_00005 PF08299 Bacterial dnaA protein helix-turn-helix AYR70_00005 PF00308 Bacterial dnaA protein AYR70_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AYR70_00010 PF02767 DNA polymerase III beta subunit, central domain AYR70_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AYR70_00015 PF02463 RecF/RecN/SMC N terminal domain AYR70_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_00020 PF18053 DNA gyrase B subunit insert domain AYR70_00020 PF01751 Toprim domain AYR70_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AYR70_00020 PF00204 DNA gyrase B AYR70_00030 PF09335 SNARE associated Golgi protein AYR70_00035 PF12848 ABC transporter AYR70_00035 PF00005 ABC transporter AYR70_00055 PF01521 Iron-sulphur cluster biosynthesis AYR70_00060 PF00561 alpha/beta hydrolase fold AYR70_00065 PF03702 Anhydro-N-acetylmuramic acid kinase AYR70_00070 PF00579 tRNA synthetases class I (W and Y) AYR70_00115 PF00209 Sodium:neurotransmitter symporter family AYR70_00125 PF01189 16S rRNA methyltransferase RsmB/F AYR70_00125 PF01029 NusB family AYR70_00130 PF02911 Formyl transferase, C-terminal domain AYR70_00130 PF00551 Formyl transferase AYR70_00135 PF00920 Dehydratase family AYR70_00150 PF03466 LysR substrate binding domain AYR70_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_00155 PF00860 Permease family AYR70_00160 PF00311 Phosphoenolpyruvate carboxylase AYR70_00165 PF00440 Bacterial regulatory proteins, tetR family AYR70_00165 PF08361 MAATS-type transcriptional repressor, C-terminal region AYR70_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_00175 PF00873 AcrB/AcrD/AcrF family AYR70_00185 PF00684 DnaJ central domain AYR70_00185 PF00226 DnaJ domain AYR70_00185 PF01556 DnaJ C terminal domain AYR70_00195 PF01113 Dihydrodipicolinate reductase, N-terminus AYR70_00195 PF05173 Dihydrodipicolinate reductase, C-terminus AYR70_00205 PF07690 Major Facilitator Superfamily AYR70_00210 PF00248 Aldo/keto reductase family AYR70_00215 PF03466 LysR substrate binding domain AYR70_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_00225 PF00392 Bacterial regulatory proteins, gntR family AYR70_00225 PF00155 Aminotransferase class I and II AYR70_00230 PF00107 Zinc-binding dehydrogenase AYR70_00230 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_00235 PF03352 Methyladenine glycosylase AYR70_00250 PF10576 Iron-sulfur binding domain of endonuclease III AYR70_00250 PF00633 Helix-hairpin-helix motif AYR70_00250 PF14815 NUDIX domain AYR70_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein AYR70_00265 PF07043 Protein of unknown function (DUF1328) AYR70_00270 PF03692 Putative zinc- or iron-chelating domain AYR70_00275 PF07995 Glucose / Sorbosone dehydrogenase AYR70_00280 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_00280 PF16193 AAA C-terminal domain AYR70_00280 PF12002 MgsA AAA+ ATPase C terminal AYR70_00285 PF01226 Formate/nitrite transporter AYR70_00295 PF01259 SAICAR synthetase AYR70_00305 PF00701 Dihydrodipicolinate synthetase family AYR70_00310 PF00857 Isochorismatase family AYR70_00315 PF01758 Sodium Bile acid symporter family AYR70_00320 PF01554 MatE AYR70_00325 PF04463 Protein of unknown function (DUF523) AYR70_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR70_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR70_00345 PF14497 Glutathione S-transferase, C-terminal domain AYR70_00345 PF02798 Glutathione S-transferase, N-terminal domain AYR70_00355 PF00324 Amino acid permease AYR70_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYR70_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYR70_00375 PF07702 UTRA domain AYR70_00375 PF00392 Bacterial regulatory proteins, gntR family AYR70_00380 PF05962 HutD AYR70_00385 PF17392 Urocanase C-terminal domain AYR70_00385 PF17391 Urocanase N-terminal domain AYR70_00385 PF01175 Urocanase Rossmann-like domain AYR70_00390 PF00221 Aromatic amino acid lyase AYR70_00395 PF00324 Amino acid permease AYR70_00400 PF01979 Amidohydrolase family AYR70_00405 PF00491 Arginase family AYR70_00420 PF01177 Asp/Glu/Hydantoin racemase AYR70_00425 PF01380 SIS domain AYR70_00430 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_00430 PF12804 MobA-like NTP transferase domain AYR70_00430 PF14602 Hexapeptide repeat of succinyl-transferase AYR70_00435 PF04608 Phosphatidylglycerophosphatase A AYR70_00440 PF02769 AIR synthase related protein, C-terminal domain AYR70_00440 PF00586 AIR synthase related protein, N-terminal domain AYR70_00445 PF01029 NusB family AYR70_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase AYR70_00455 PF00925 GTP cyclohydrolase II AYR70_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYR70_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase AYR70_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYR70_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AYR70_00490 PF00581 Rhodanese-like domain AYR70_00495 PF02666 Phosphatidylserine decarboxylase AYR70_00500 PF03069 Acetamidase/Formamidase family AYR70_00520 PF11808 Phosphate regulon sensor protein PhoR AYR70_00520 PF00989 PAS fold AYR70_00520 PF00512 His Kinase A (phospho-acceptor) domain AYR70_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_00525 PF00072 Response regulator receiver domain AYR70_00525 PF00486 Transcriptional regulatory protein, C terminal AYR70_00535 PF00106 short chain dehydrogenase AYR70_00540 PF01554 MatE AYR70_00545 PF00155 Aminotransferase class I and II AYR70_00550 PF04286 Protein of unknown function (DUF445) AYR70_00565 PF04262 Glutamate-cysteine ligase AYR70_00570 PF02600 Disulfide bond formation protein DsbB AYR70_00575 PF04717 Type VI secretion system, phage-baseplate injector AYR70_00580 PF00877 NlpC/P60 family AYR70_00580 PF01476 LysM domain AYR70_00595 PF05728 Uncharacterised protein family (UPF0227) AYR70_00600 PF01751 Toprim domain AYR70_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_00600 PF00986 DNA gyrase B subunit, carboxyl terminus AYR70_00600 PF00204 DNA gyrase B AYR70_00605 PF00106 short chain dehydrogenase AYR70_00610 PF04115 Ureidoglycolate lyase AYR70_00615 PF03561 Allantoicase repeat AYR70_00620 PF01494 FAD binding domain AYR70_00630 PF00860 Permease family AYR70_00635 PF00576 HIUase/Transthyretin family AYR70_00665 PF02683 Cytochrome C biogenesis protein transmembrane region AYR70_00665 PF11412 Disulphide bond corrector protein DsbC AYR70_00670 PF07694 5TMR of 5TMR-LYT AYR70_00670 PF00990 Diguanylate cyclase, GGDEF domain AYR70_00675 PF07859 alpha/beta hydrolase fold AYR70_00685 PF03960 ArsC family AYR70_00690 PF03372 Endonuclease/Exonuclease/phosphatase family AYR70_00695 PF00156 Phosphoribosyl transferase domain AYR70_00700 PF07715 TonB-dependent Receptor Plug Domain AYR70_00700 PF00593 TonB dependent receptor AYR70_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AYR70_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AYR70_00715 PF04101 Glycosyltransferase family 28 C-terminal domain AYR70_00715 PF03033 Glycosyltransferase family 28 N-terminal domain AYR70_00720 PF08245 Mur ligase middle domain AYR70_00720 PF02875 Mur ligase family, glutamate ligase domain AYR70_00720 PF01225 Mur ligase family, catalytic domain AYR70_00725 PF07478 D-ala D-ala ligase C-terminus AYR70_00725 PF01820 D-ala D-ala ligase N-terminus AYR70_00730 PF03799 Cell division protein FtsQ AYR70_00730 PF08478 POTRA domain, FtsQ-type AYR70_00735 PF02491 SHS2 domain inserted in FTSA AYR70_00740 PF00091 Tubulin/FtsZ family, GTPase domain AYR70_00740 PF12327 FtsZ family, C-terminal domain AYR70_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AYR70_00755 PF01551 Peptidase family M23 AYR70_00760 PF00456 Transketolase, thiamine diphosphate binding domain AYR70_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain AYR70_00765 PF00364 Biotin-requiring enzyme AYR70_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYR70_00765 PF02817 e3 binding domain AYR70_00775 PF01169 Uncharacterized protein family UPF0016 AYR70_00780 PF00593 TonB dependent receptor AYR70_00780 PF07715 TonB-dependent Receptor Plug Domain AYR70_00785 PF01613 Flavin reductase like domain AYR70_00785 PF00258 Flavodoxin AYR70_00790 PF03692 Putative zinc- or iron-chelating domain AYR70_00795 PF00571 CBS domain AYR70_00795 PF00478 IMP dehydrogenase / GMP reductase domain AYR70_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR70_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR70_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR70_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR70_00805 PF01243 Pyridoxamine 5'-phosphate oxidase AYR70_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AYR70_00810 PF01368 DHH family AYR70_00810 PF02272 DHHA1 domain AYR70_00810 PF17768 RecJ OB domain AYR70_00820 PF00472 RF-1 domain AYR70_00820 PF03462 PCRF domain AYR70_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR70_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AYR70_00840 PF04452 RNA methyltransferase AYR70_00845 PF00924 Mechanosensitive ion channel AYR70_00855 PF13193 AMP-binding enzyme C-terminal domain AYR70_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus AYR70_00855 PF00501 AMP-binding enzyme AYR70_00860 PF00857 Isochorismatase family AYR70_00865 PF01037 Lrp/AsnC ligand binding domain AYR70_00870 PF00872 Transposase, Mutator family AYR70_00875 PF00296 Luciferase-like monooxygenase AYR70_00880 PF03358 NADPH-dependent FMN reductase AYR70_00885 PF00196 Bacterial regulatory proteins, luxR family AYR70_00885 PF00072 Response regulator receiver domain AYR70_00895 PF00072 Response regulator receiver domain AYR70_00895 PF01627 Hpt domain AYR70_00895 PF00512 His Kinase A (phospho-acceptor) domain AYR70_00895 PF00672 HAMP domain AYR70_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_00900 PF04341 Protein of unknown function, DUF485 AYR70_00905 PF00474 Sodium:solute symporter family AYR70_00915 PF02028 BCCT, betaine/carnitine/choline family transporter AYR70_00925 PF00990 Diguanylate cyclase, GGDEF domain AYR70_00925 PF17158 Membrane-associated sensor, integral membrane domain AYR70_00935 PF17760 UvrA interaction domain AYR70_00935 PF17755 UvrA DNA-binding domain AYR70_00935 PF00005 ABC transporter AYR70_00940 PF00440 Bacterial regulatory proteins, tetR family AYR70_00940 PF16925 Tetracyclin repressor-like, C-terminal domain AYR70_00945 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_00945 PF00107 Zinc-binding dehydrogenase AYR70_00955 PF06942 GlpM protein AYR70_00960 PF02581 Thiamine monophosphate synthase AYR70_00960 PF03070 TENA/THI-4/PQQC family AYR70_00960 PF08543 Phosphomethylpyrimidine kinase AYR70_00970 PF07690 Major Facilitator Superfamily AYR70_00975 PF00436 Single-strand binding protein family AYR70_00985 PF03591 AzlC protein AYR70_00995 PF00324 Amino acid permease AYR70_01000 PF00392 Bacterial regulatory proteins, gntR family AYR70_01000 PF00155 Aminotransferase class I and II AYR70_01005 PF00202 Aminotransferase class-III AYR70_01010 PF00171 Aldehyde dehydrogenase family AYR70_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_01020 PF00857 Isochorismatase family AYR70_01025 PF05726 Pirin C-terminal cupin domain AYR70_01025 PF02678 Pirin AYR70_01030 PF01593 Flavin containing amine oxidoreductase AYR70_01050 PF07690 Major Facilitator Superfamily AYR70_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_01055 PF03466 LysR substrate binding domain AYR70_01075 PF00248 Aldo/keto reductase family AYR70_01080 PF12833 Helix-turn-helix domain AYR70_01080 PF02311 AraC-like ligand binding domain AYR70_01105 PF01638 HxlR-like helix-turn-helix AYR70_01110 PF02525 Flavodoxin-like fold AYR70_01130 PF02705 K+ potassium transporter AYR70_01155 PF00230 Major intrinsic protein AYR70_01170 PF00977 Histidine biosynthesis protein AYR70_01175 PF01636 Phosphotransferase enzyme family AYR70_01190 PF03992 Antibiotic biosynthesis monooxygenase AYR70_01205 PF00977 Histidine biosynthesis protein AYR70_01220 PF00117 Glutamine amidotransferase class-I AYR70_01225 PF00475 Imidazoleglycerol-phosphate dehydratase AYR70_01245 PF00583 Acetyltransferase (GNAT) family AYR70_01250 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AYR70_01250 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AYR70_01255 PF00672 HAMP domain AYR70_01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_01255 PF00512 His Kinase A (phospho-acceptor) domain AYR70_01260 PF00072 Response regulator receiver domain AYR70_01260 PF00486 Transcriptional regulatory protein, C terminal AYR70_01265 PF17674 HHH domain AYR70_01265 PF16921 Tex protein YqgF-like domain AYR70_01265 PF09371 Tex-like protein N-terminal domain AYR70_01265 PF00575 S1 RNA binding domain AYR70_01270 PF00916 Sulfate permease family AYR70_01270 PF01740 STAS domain AYR70_01275 PF00106 short chain dehydrogenase AYR70_01280 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR70_01285 PF00005 ABC transporter AYR70_01285 PF12848 ABC transporter AYR70_01310 PF04191 Phospholipid methyltransferase AYR70_01325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_01325 PF00529 HlyD membrane-fusion protein of T1SS AYR70_01330 PF00873 AcrB/AcrD/AcrF family AYR70_01335 PF01545 Cation efflux family AYR70_01365 PF00324 Amino acid permease AYR70_01380 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR70_01395 PF01795 MraW methylase family AYR70_01405 PF00905 Penicillin binding protein transpeptidase domain AYR70_01405 PF03717 Penicillin-binding Protein dimerisation domain AYR70_01410 PF01225 Mur ligase family, catalytic domain AYR70_01410 PF02875 Mur ligase family, glutamate ligase domain AYR70_01410 PF08245 Mur ligase middle domain AYR70_01415 PF02875 Mur ligase family, glutamate ligase domain AYR70_01415 PF01225 Mur ligase family, catalytic domain AYR70_01415 PF08245 Mur ligase middle domain AYR70_01420 PF00953 Glycosyl transferase family 4 AYR70_01430 PF13847 Methyltransferase domain AYR70_01435 PF00912 Transglycosylase AYR70_01435 PF17092 Penicillin-binding protein OB-like domain AYR70_01435 PF00905 Penicillin binding protein transpeptidase domain AYR70_01460 PF07660 Secretin and TonB N terminus short domain AYR70_01460 PF03958 Bacterial type II/III secretion system short domain AYR70_01460 PF00263 Bacterial type II and III secretion system protein AYR70_01460 PF11741 AMIN domain AYR70_01465 PF01202 Shikimate kinase AYR70_01470 PF01761 3-dehydroquinate synthase AYR70_01480 PF00310 Glutamine amidotransferases class-II AYR70_01480 PF01645 Conserved region in glutamate synthase AYR70_01480 PF01493 GXGXG motif AYR70_01480 PF04898 Glutamate synthase central domain AYR70_01485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_01485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AYR70_01495 PF04011 LemA family AYR70_01500 PF04536 TPM domain AYR70_01510 PF00114 Pilin (bacterial filament) AYR70_01510 PF07963 Prokaryotic N-terminal methylation motif AYR70_01520 PF04932 O-Antigen ligase AYR70_01520 PF11846 Virulence factor membrane-bound polymerase, C-terminal AYR70_01520 PF15864 Protein glycosylation ligase AYR70_01525 PF00210 Ferritin-like domain AYR70_01530 PF04324 BFD-like [2Fe-2S] binding domain AYR70_01535 PF01042 Endoribonuclease L-PSP AYR70_01540 PF02824 TGS domain AYR70_01540 PF04607 Region found in RelA / SpoT proteins AYR70_01540 PF13291 ACT domain AYR70_01545 PF01192 RNA polymerase Rpb6 AYR70_01550 PF00625 Guanylate kinase AYR70_01555 PF02401 LytB protein AYR70_01595 PF00886 Ribosomal protein S16 AYR70_01600 PF01782 RimM N-terminal domain AYR70_01600 PF05239 PRC-barrel domain AYR70_01605 PF01746 tRNA (Guanine-1)-methyltransferase AYR70_01610 PF01245 Ribosomal protein L19 AYR70_01615 PF00561 alpha/beta hydrolase fold AYR70_01620 PF03280 Proteobacterial lipase chaperone protein AYR70_01625 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYR70_01625 PF16198 tRNA pseudouridylate synthase B C-terminal domain AYR70_01625 PF09157 Pseudouridine synthase II TruB, C-terminal AYR70_01630 PF01925 Sulfite exporter TauE/SafE AYR70_01640 PF00892 EamA-like transporter family AYR70_01645 PF00892 EamA-like transporter family AYR70_01650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR70_01650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR70_01655 PF02913 FAD linked oxidases, C-terminal domain AYR70_01655 PF01565 FAD binding domain AYR70_01665 PF03992 Antibiotic biosynthesis monooxygenase AYR70_01670 PF02525 Flavodoxin-like fold AYR70_01680 PF07690 Major Facilitator Superfamily AYR70_01685 PF12805 FUSC-like inner membrane protein yccS AYR70_01690 PF00080 Copper/zinc superoxide dismutase (SODC) AYR70_01695 PF01594 AI-2E family transporter AYR70_01700 PF13614 AAA domain AYR70_01730 PF00324 Amino acid permease AYR70_01735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYR70_01735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR70_01740 PF00202 Aminotransferase class-III AYR70_01745 PF04958 Arginine N-succinyltransferase beta subunit AYR70_01750 PF00171 Aldehyde dehydrogenase family AYR70_01755 PF04996 Succinylarginine dihydrolase AYR70_01760 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AYR70_01790 PF03466 LysR substrate binding domain AYR70_01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_01795 PF00892 EamA-like transporter family AYR70_01805 PF05746 DALR anticodon binding domain AYR70_01805 PF02092 Glycyl-tRNA synthetase beta subunit AYR70_01810 PF02091 Glycyl-tRNA synthetase alpha subunit AYR70_01835 PF00571 CBS domain AYR70_01840 PF04024 PspC domain AYR70_01850 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_01850 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYR70_01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_01860 PF08501 Shikimate dehydrogenase substrate binding domain AYR70_01860 PF01488 Shikimate / quinate 5-dehydrogenase AYR70_01860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYR70_01865 PF01218 Coproporphyrinogen III oxidase AYR70_01870 PF00925 GTP cyclohydrolase II AYR70_01875 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AYR70_01875 PF02779 Transketolase, pyrimidine binding domain AYR70_01875 PF02780 Transketolase, C-terminal domain AYR70_01880 PF00459 Inositol monophosphatase family AYR70_01885 PF03880 DbpA RNA binding domain AYR70_01885 PF12343 Cold shock protein DEAD box A AYR70_01885 PF00271 Helicase conserved C-terminal domain AYR70_01885 PF00270 DEAD/DEAH box helicase AYR70_01895 PF00005 ABC transporter AYR70_01900 PF02405 Permease MlaE AYR70_01910 PF05494 MlaC protein AYR70_01920 PF01544 CorA-like Mg2+ transporter protein AYR70_01925 PF03641 Possible lysine decarboxylase AYR70_01930 PF00293 NUDIX domain AYR70_01935 PF00156 Phosphoribosyl transferase domain AYR70_01940 PF00270 DEAD/DEAH box helicase AYR70_01940 PF00271 Helicase conserved C-terminal domain AYR70_01940 PF17191 RecG wedge domain AYR70_01955 PF01553 Acyltransferase AYR70_01965 PF00375 Sodium:dicarboxylate symporter family AYR70_01975 PF01926 50S ribosome-binding GTPase AYR70_01980 PF02082 Transcriptional regulator AYR70_01985 PF00042 Globin AYR70_01985 PF00970 Oxidoreductase FAD-binding domain AYR70_01985 PF00175 Oxidoreductase NAD-binding domain AYR70_01990 PF05872 Bacterial protein of unknown function (DUF853) AYR70_01995 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR70_02000 PF00117 Glutamine amidotransferase class-I AYR70_02005 PF00338 Ribosomal protein S10p/S20e AYR70_02010 PF00297 Ribosomal protein L3 AYR70_02015 PF00573 Ribosomal protein L4/L1 family AYR70_02020 PF00276 Ribosomal protein L23 AYR70_02025 PF03947 Ribosomal Proteins L2, C-terminal domain AYR70_02025 PF00181 Ribosomal Proteins L2, RNA binding domain AYR70_02030 PF00203 Ribosomal protein S19 AYR70_02035 PF00237 Ribosomal protein L22p/L17e AYR70_02040 PF00189 Ribosomal protein S3, C-terminal domain AYR70_02040 PF07650 KH domain AYR70_02045 PF00252 Ribosomal protein L16p/L10e AYR70_02050 PF00831 Ribosomal L29 protein AYR70_02055 PF00366 Ribosomal protein S17 AYR70_02060 PF00238 Ribosomal protein L14p/L23e AYR70_02065 PF00467 KOW motif AYR70_02065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AYR70_02070 PF00281 Ribosomal protein L5 AYR70_02070 PF00673 ribosomal L5P family C-terminus AYR70_02075 PF00253 Ribosomal protein S14p/S29e AYR70_02080 PF00410 Ribosomal protein S8 AYR70_02085 PF00347 Ribosomal protein L6 AYR70_02090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AYR70_02095 PF03719 Ribosomal protein S5, C-terminal domain AYR70_02095 PF00333 Ribosomal protein S5, N-terminal domain AYR70_02100 PF00327 Ribosomal protein L30p/L7e AYR70_02105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AYR70_02110 PF00344 SecY translocase AYR70_02115 PF00444 Ribosomal protein L36 AYR70_02120 PF00416 Ribosomal protein S13/S18 AYR70_02125 PF00411 Ribosomal protein S11 AYR70_02130 PF00163 Ribosomal protein S4/S9 N-terminal domain AYR70_02130 PF01479 S4 domain AYR70_02135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYR70_02135 PF01000 RNA polymerase Rpb3/RpoA insert domain AYR70_02135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYR70_02140 PF01196 Ribosomal protein L17 AYR70_02145 PF00743 Flavin-binding monooxygenase-like AYR70_02150 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_02150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_02150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_02155 PF03937 Flavinator of succinate dehydrogenase AYR70_02185 PF09526 Probable metal-binding protein (DUF2387) AYR70_02190 PF01432 Peptidase family M3 AYR70_02195 PF17876 Cold shock domain AYR70_02195 PF08206 Ribonuclease B OB domain AYR70_02195 PF08461 Ribonuclease R winged-helix domain AYR70_02195 PF00773 RNB domain AYR70_02195 PF00575 S1 RNA binding domain AYR70_02240 PF01557 Fumarylacetoacetate (FAA) hydrolase family AYR70_02245 PF12833 Helix-turn-helix domain AYR70_02250 PF00892 EamA-like transporter family AYR70_02255 PF03631 Virulence factor BrkB AYR70_02260 PF03358 NADPH-dependent FMN reductase AYR70_02285 PF02130 Uncharacterized protein family UPF0054 AYR70_02290 PF02562 PhoH-like protein AYR70_02295 PF00919 Uncharacterized protein family UPF0004 AYR70_02295 PF04055 Radical SAM superfamily AYR70_02295 PF01938 TRAM domain AYR70_02300 PF01464 Transglycosylase SLT domain AYR70_02300 PF10145 Phage-related minor tail protein AYR70_02300 PF01551 Peptidase family M23 AYR70_02310 PF00056 lactate/malate dehydrogenase, NAD binding domain AYR70_02310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYR70_02330 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AYR70_02335 PF01066 CDP-alcohol phosphatidyltransferase AYR70_02380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_02380 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_02380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_02385 PF00440 Bacterial regulatory proteins, tetR family AYR70_02385 PF17932 Tetracyclin repressor-like, C-terminal domain AYR70_02400 PF01039 Carboxyl transferase domain AYR70_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_02405 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_02415 PF00364 Biotin-requiring enzyme AYR70_02415 PF00289 Biotin carboxylase, N-terminal domain AYR70_02415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR70_02415 PF02785 Biotin carboxylase C-terminal domain AYR70_02425 PF04386 Stringent starvation protein B AYR70_02430 PF00043 Glutathione S-transferase, C-terminal domain AYR70_02430 PF13417 Glutathione S-transferase, N-terminal domain AYR70_02435 PF00380 Ribosomal protein S9/S16 AYR70_02440 PF00572 Ribosomal protein L13 AYR70_02445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AYR70_02450 PF00398 Ribosomal RNA adenine dimethylase AYR70_02455 PF00149 Calcineurin-like phosphoesterase AYR70_02475 PF16360 GTP-binding GTPase Middle Region AYR70_02475 PF13167 GTP-binding GTPase N-terminal AYR70_02475 PF01926 50S ribosome-binding GTPase AYR70_02485 PF13091 PLD-like domain AYR70_02490 PF10518 TAT (twin-arginine translocation) pathway signal sequence AYR70_02490 PF00149 Calcineurin-like phosphoesterase AYR70_02495 PF00691 OmpA family AYR70_02495 PF01389 OmpA-like transmembrane domain AYR70_02500 PF00990 Diguanylate cyclase, GGDEF domain AYR70_02500 PF17152 Periplasmic sensor domain AYR70_02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_02535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR70_02545 PF04273 Putative phosphatase (DUF442) AYR70_02545 PF00753 Metallo-beta-lactamase superfamily AYR70_02550 PF00561 alpha/beta hydrolase fold AYR70_02555 PF00085 Thioredoxin AYR70_02560 PF03061 Thioesterase superfamily AYR70_02570 PF04461 Protein of unknown function (DUF520) AYR70_02580 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AYR70_02580 PF01266 FAD dependent oxidoreductase AYR70_02590 PF03795 YCII-related domain AYR70_02595 PF04279 Intracellular septation protein A AYR70_02600 PF02811 PHP domain AYR70_02605 PF01062 Bestrophin, RFP-TM, chloride channel AYR70_02610 PF04002 RadC-like JAB domain AYR70_02615 PF04127 DNA / pantothenate metabolism flavoprotein AYR70_02615 PF02441 Flavoprotein AYR70_02620 PF02355 Protein export membrane protein AYR70_02620 PF07549 SecD/SecF GG Motif AYR70_02625 PF02355 Protein export membrane protein AYR70_02625 PF07549 SecD/SecF GG Motif AYR70_02625 PF13721 SecD export protein N-terminal TM region AYR70_02630 PF02699 Preprotein translocase subunit AYR70_02635 PF01702 Queuine tRNA-ribosyltransferase AYR70_02650 PF02547 Queuosine biosynthesis protein AYR70_02675 PF00512 His Kinase A (phospho-acceptor) domain AYR70_02675 PF07689 KaiB domain AYR70_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_02680 PF03710 Glutamate-ammonia ligase adenylyltransferase AYR70_02680 PF08335 GlnD PII-uridylyltransferase AYR70_02685 PF01063 Amino-transferase class IV AYR70_02700 PF01522 Polysaccharide deacetylase AYR70_02705 PF00535 Glycosyl transferase family 2 AYR70_02710 PF00534 Glycosyl transferases group 1 AYR70_02710 PF13439 Glycosyltransferase Family 4 AYR70_02735 PF17101 Stealth protein CR1, conserved region 1 AYR70_02735 PF17102 Stealth protein CR3, conserved region 3 AYR70_02735 PF11380 Stealth protein CR2, conserved region 2 AYR70_02740 PF02938 GAD domain AYR70_02740 PF00152 tRNA synthetases class II (D, K and N) AYR70_02740 PF01336 OB-fold nucleic acid binding domain AYR70_02750 PF07715 TonB-dependent Receptor Plug Domain AYR70_02750 PF00593 TonB dependent receptor AYR70_02770 PF06146 Phosphate-starvation-inducible E AYR70_02775 PF00043 Glutathione S-transferase, C-terminal domain AYR70_02775 PF02798 Glutathione S-transferase, N-terminal domain AYR70_02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_02780 PF03466 LysR substrate binding domain AYR70_02785 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYR70_02785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_02785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_02785 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_02790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_02790 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_02790 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYR70_02790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_02800 PF00672 HAMP domain AYR70_02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_02800 PF00512 His Kinase A (phospho-acceptor) domain AYR70_02805 PF00486 Transcriptional regulatory protein, C terminal AYR70_02805 PF00072 Response regulator receiver domain AYR70_02810 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AYR70_02830 PF01923 Cobalamin adenosyltransferase AYR70_02835 PF07715 TonB-dependent Receptor Plug Domain AYR70_02835 PF00593 TonB dependent receptor AYR70_02840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AYR70_02845 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_02870 PF00290 Tryptophan synthase alpha chain AYR70_02875 PF01039 Carboxyl transferase domain AYR70_02880 PF08245 Mur ligase middle domain AYR70_02880 PF02875 Mur ligase family, glutamate ligase domain AYR70_02895 PF00753 Metallo-beta-lactamase superfamily AYR70_02900 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYR70_02900 PF00578 AhpC/TSA family AYR70_02905 PF02810 SEC-C motif AYR70_02905 PF07517 SecA DEAD-like domain AYR70_02905 PF01043 SecA preprotein cross-linking domain AYR70_02905 PF07516 SecA Wing and Scaffold domain AYR70_02915 PF07690 Major Facilitator Superfamily AYR70_02915 PF00083 Sugar (and other) transporter AYR70_02920 PF03006 Haemolysin-III related AYR70_02945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR70_02945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR70_02945 PF00378 Enoyl-CoA hydratase/isomerase AYR70_02950 PF00108 Thiolase, N-terminal domain AYR70_02950 PF02803 Thiolase, C-terminal domain AYR70_02955 PF12833 Helix-turn-helix domain AYR70_02955 PF02311 AraC-like ligand binding domain AYR70_02960 PF02515 CoA-transferase family III AYR70_02965 PF04966 Carbohydrate-selective porin, OprB family AYR70_02970 PF01011 PQQ enzyme repeat AYR70_02975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYR70_02975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYR70_02985 PF00893 Small Multidrug Resistance protein AYR70_02995 PF02803 Thiolase, C-terminal domain AYR70_02995 PF00108 Thiolase, N-terminal domain AYR70_03005 PF00691 OmpA family AYR70_03005 PF13505 Outer membrane protein beta-barrel domain AYR70_03015 PF01139 tRNA-splicing ligase RtcB AYR70_03020 PF00324 Amino acid permease AYR70_03025 PF05175 Methyltransferase small domain AYR70_03025 PF08468 Methyltransferase small domain N-terminal AYR70_03030 PF00860 Permease family AYR70_03040 PF01741 Large-conductance mechanosensitive channel, MscL AYR70_03055 PF06827 Zinc finger found in FPG and IleRS AYR70_03055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYR70_03055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYR70_03060 PF02245 Methylpurine-DNA glycosylase (MPG) AYR70_03085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR70_03100 PF13098 Thioredoxin-like domain AYR70_03100 PF10411 Disulfide bond isomerase protein N-terminus AYR70_03105 PF01571 Aminomethyltransferase folate-binding domain AYR70_03115 PF04343 Protein of unknown function, DUF488 AYR70_03120 PF08274 PhnA Zinc-Ribbon AYR70_03120 PF03831 PhnA domain AYR70_03125 PF07411 Domain of unknown function (DUF1508) AYR70_03130 PF03129 Anticodon binding domain AYR70_03130 PF04073 Aminoacyl-tRNA editing domain AYR70_03130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR70_03135 PF00873 AcrB/AcrD/AcrF family AYR70_03150 PF00072 Response regulator receiver domain AYR70_03155 PF00072 Response regulator receiver domain AYR70_03160 PF01584 CheW-like domain AYR70_03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AYR70_03165 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AYR70_03170 PF01584 CheW-like domain AYR70_03170 PF01627 Hpt domain AYR70_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_03170 PF00072 Response regulator receiver domain AYR70_03180 PF01546 Peptidase family M20/M25/M40 AYR70_03180 PF07687 Peptidase dimerisation domain AYR70_03185 PF08085 Entericidin EcnA/B family AYR70_03195 PF04304 Protein of unknown function (DUF454) AYR70_03200 PF03734 L,D-transpeptidase catalytic domain AYR70_03200 PF17969 L,D-transpeptidase C-terminal domain AYR70_03240 PF00258 Flavodoxin AYR70_03240 PF00667 FAD binding domain AYR70_03240 PF00175 Oxidoreductase NAD-binding domain AYR70_03250 PF12805 FUSC-like inner membrane protein yccS AYR70_03255 PF07690 Major Facilitator Superfamily AYR70_03260 PF00881 Nitroreductase family AYR70_03270 PF01235 Sodium:alanine symporter family AYR70_03275 PF01734 Patatin-like phospholipase AYR70_03280 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_03280 PF13291 ACT domain AYR70_03285 PF05992 SbmA/BacA-like family AYR70_03315 PF02637 GatB domain AYR70_03315 PF02934 GatB/GatE catalytic domain AYR70_03320 PF01425 Amidase AYR70_03325 PF02686 Glu-tRNAGln amidotransferase C subunit AYR70_03335 PF04085 rod shape-determining protein MreC AYR70_03340 PF04093 rod shape-determining protein MreD AYR70_03345 PF02545 Maf-like protein AYR70_03350 PF00575 S1 RNA binding domain AYR70_03350 PF10150 Ribonuclease E/G family AYR70_03360 PF06974 Protein of unknown function (DUF1298) AYR70_03360 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AYR70_03365 PF01507 Phosphoadenosine phosphosulfate reductase family AYR70_03380 PF02525 Flavodoxin-like fold AYR70_03400 PF02673 Bacitracin resistance protein BacA AYR70_03405 PF06719 AraC-type transcriptional regulator N-terminus AYR70_03405 PF12833 Helix-turn-helix domain AYR70_03410 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR70_03410 PF16197 Ketoacyl-synthetase C-terminal extension AYR70_03410 PF09277 Erythronolide synthase, docking AYR70_03410 PF08990 Erythronolide synthase docking AYR70_03410 PF00550 Phosphopantetheine attachment site AYR70_03410 PF08659 KR domain AYR70_03410 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_03410 PF00698 Acyl transferase domain AYR70_03410 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR70_03410 PF14765 Polyketide synthase dehydratase AYR70_03415 PF01965 DJ-1/PfpI family AYR70_03425 PF00324 Amino acid permease AYR70_03430 PF04303 PrpF protein AYR70_03435 PF00348 Polyprenyl synthetase AYR70_03440 PF04237 YjbR AYR70_03445 PF01145 SPFH domain / Band 7 family AYR70_03455 PF01734 Patatin-like phospholipase AYR70_03475 PF00884 Sulfatase AYR70_03475 PF08019 Phosphoethanolamine transferase EptA/EptB AYR70_03480 PF00072 Response regulator receiver domain AYR70_03480 PF00486 Transcriptional regulatory protein, C terminal AYR70_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_03485 PF08521 Two-component sensor kinase N-terminal AYR70_03485 PF00512 His Kinase A (phospho-acceptor) domain AYR70_03495 PF00909 Ammonium Transporter Family AYR70_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_03500 PF03466 LysR substrate binding domain AYR70_03520 PF10458 Valyl tRNA synthetase tRNA binding arm AYR70_03520 PF00133 tRNA synthetases class I (I, L, M and V) AYR70_03520 PF08264 Anticodon-binding domain of tRNA AYR70_03540 PF01906 Putative heavy-metal-binding AYR70_03545 PF01906 Putative heavy-metal-binding AYR70_03550 PF02321 Outer membrane efflux protein AYR70_03555 PF00873 AcrB/AcrD/AcrF family AYR70_03560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_03560 PF00529 HlyD membrane-fusion protein of T1SS AYR70_03565 PF01569 PAP2 superfamily AYR70_03575 PF00348 Polyprenyl synthetase AYR70_03585 PF00829 Ribosomal prokaryotic L21 protein AYR70_03590 PF01016 Ribosomal L27 protein AYR70_03595 PF03548 Outer membrane lipoprotein carrier protein LolA AYR70_03605 PF02403 Seryl-tRNA synthetase N-terminal domain AYR70_03605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR70_03610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYR70_03610 PF14824 Sirohaem biosynthesis protein central AYR70_03610 PF10414 Sirohaem synthase dimerisation region AYR70_03615 PF00588 SpoU rRNA Methylase family AYR70_03620 PF01638 HxlR-like helix-turn-helix AYR70_03625 PF03358 NADPH-dependent FMN reductase AYR70_03630 PF13520 Amino acid permease AYR70_03635 PF00465 Iron-containing alcohol dehydrogenase AYR70_03645 PF03099 Biotin/lipoate A/B protein ligase family AYR70_03650 PF04359 Protein of unknown function (DUF493) AYR70_03655 PF03979 Sigma-70 factor, region 1.1 AYR70_03655 PF04545 Sigma-70, region 4 AYR70_03655 PF04546 Sigma-70, non-essential region AYR70_03655 PF04539 Sigma-70 region 3 AYR70_03655 PF04542 Sigma-70 region 2 AYR70_03655 PF00140 Sigma-70 factor, region 1.2 AYR70_03685 PF00285 Citrate synthase, C-terminal domain AYR70_03690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYR70_03695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYR70_03700 PF00890 FAD binding domain AYR70_03700 PF02910 Fumarate reductase flavoprotein C-term AYR70_03705 PF13085 2Fe-2S iron-sulfur cluster binding domain AYR70_03710 PF16078 2-oxoglutarate dehydrogenase N-terminus AYR70_03710 PF00676 Dehydrogenase E1 component AYR70_03710 PF16870 2-oxoglutarate dehydrogenase C-terminal AYR70_03710 PF02779 Transketolase, pyrimidine binding domain AYR70_03715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYR70_03715 PF02817 e3 binding domain AYR70_03715 PF00364 Biotin-requiring enzyme AYR70_03720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_03720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR70_03725 PF08442 ATP-grasp domain AYR70_03725 PF00549 CoA-ligase AYR70_03730 PF00549 CoA-ligase AYR70_03730 PF02629 CoA binding domain AYR70_03735 PF00579 tRNA synthetases class I (W and Y) AYR70_03740 PF05661 Protein of unknown function (DUF808) AYR70_03745 PF04228 Putative neutral zinc metallopeptidase AYR70_03750 PF00999 Sodium/hydrogen exchanger family AYR70_03770 PF09587 Bacterial capsule synthesis protein PGA_cap AYR70_03780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR70_03785 PF00582 Universal stress protein family AYR70_03790 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_03795 PF01272 Transcription elongation factor, GreA/GreB, C-term AYR70_03795 PF03449 Transcription elongation factor, N-terminal AYR70_03800 PF02142 MGS-like domain AYR70_03800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR70_03800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR70_03805 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AYR70_03805 PF00117 Glutamine amidotransferase class-I AYR70_03820 PF01985 CRS1 / YhbY (CRM) domain AYR70_03825 PF01728 FtsJ-like methyltransferase AYR70_03830 PF06480 FtsH Extracellular AYR70_03830 PF17862 AAA+ lid domain AYR70_03830 PF01434 Peptidase family M41 AYR70_03830 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_03835 PF00809 Pterin binding enzyme AYR70_03855 PF09423 PhoD-like phosphatase AYR70_03855 PF16655 PhoD-like phosphatase, N-terminal domain AYR70_03870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYR70_03870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYR70_03885 PF00083 Sugar (and other) transporter AYR70_03890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYR70_03890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYR70_03895 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AYR70_03895 PF01266 FAD dependent oxidoreductase AYR70_03900 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AYR70_03900 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AYR70_03905 PF00781 Diacylglycerol kinase catalytic domain AYR70_03910 PF00149 Calcineurin-like phosphoesterase AYR70_03920 PF00166 Chaperonin 10 Kd subunit AYR70_03925 PF00118 TCP-1/cpn60 chaperonin family AYR70_03930 PF01219 Prokaryotic diacylglycerol kinase AYR70_03935 PF00753 Metallo-beta-lactamase superfamily AYR70_03940 PF03009 Glycerophosphoryl diester phosphodiesterase family AYR70_03945 PF00873 AcrB/AcrD/AcrF family AYR70_03955 PF01435 Peptidase family M48 AYR70_03960 PF01464 Transglycosylase SLT domain AYR70_03965 PF01171 PP-loop family AYR70_03975 PF01464 Transglycosylase SLT domain AYR70_03975 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR70_03980 PF01272 Transcription elongation factor, GreA/GreB, C-term AYR70_03980 PF03449 Transcription elongation factor, N-terminal AYR70_03995 PF00975 Thioesterase domain AYR70_03995 PF00501 AMP-binding enzyme AYR70_03995 PF00668 Condensation domain AYR70_03995 PF13193 AMP-binding enzyme C-terminal domain AYR70_03995 PF00550 Phosphopantetheine attachment site AYR70_04020 PF00881 Nitroreductase family AYR70_04035 PF02595 Glycerate kinase family AYR70_04040 PF00384 Molybdopterin oxidoreductase AYR70_04045 PF02634 FdhD/NarQ family AYR70_04050 PF06803 Protein of unknown function (DUF1232) AYR70_04055 PF11890 Domain of unknown function (DUF3410) AYR70_04055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR70_04055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR70_04060 PF00152 tRNA synthetases class II (D, K and N) AYR70_04070 PF18073 Rubredoxin metal binding domain AYR70_04075 PF00324 Amino acid permease AYR70_04085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AYR70_04085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AYR70_04090 PF01678 Diaminopimelate epimerase AYR70_04095 PF01810 LysE type translocator AYR70_04100 PF00589 Phage integrase family AYR70_04100 PF02899 Phage integrase, N-terminal SAM-like domain AYR70_04105 PF01012 Electron transfer flavoprotein domain AYR70_04110 PF00766 Electron transfer flavoprotein FAD-binding domain AYR70_04110 PF01012 Electron transfer flavoprotein domain AYR70_04115 PF03989 DNA gyrase C-terminal domain, beta-propeller AYR70_04115 PF00521 DNA gyrase/topoisomerase IV, subunit A AYR70_04130 PF00535 Glycosyl transferase family 2 AYR70_04150 PF13533 Biotin-lipoyl like AYR70_04160 PF00266 Aminotransferase class-V AYR70_04170 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AYR70_04180 PF02687 FtsX-like permease family AYR70_04180 PF12704 MacB-like periplasmic core domain AYR70_04185 PF00005 ABC transporter AYR70_04190 PF13567 Domain of unknown function (DUF4131) AYR70_04190 PF00753 Metallo-beta-lactamase superfamily AYR70_04190 PF03772 Competence protein AYR70_04200 PF01343 Peptidase family S49 AYR70_04200 PF06965 Na+/H+ antiporter 1 AYR70_04205 PF12697 Alpha/beta hydrolase family AYR70_04210 PF00551 Formyl transferase AYR70_04215 PF00586 AIR synthase related protein, N-terminal domain AYR70_04215 PF02769 AIR synthase related protein, C-terminal domain AYR70_04220 PF01594 AI-2E family transporter AYR70_04225 PF08299 Bacterial dnaA protein helix-turn-helix AYR70_04225 PF11638 DnaA N-terminal domain AYR70_04225 PF00308 Bacterial dnaA protein AYR70_04255 PF00588 SpoU rRNA Methylase family AYR70_04255 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYR70_04260 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AYR70_04270 PF00691 OmpA family AYR70_04275 PF07676 WD40-like Beta Propeller Repeat AYR70_04275 PF04052 TolB amino-terminal domain AYR70_04285 PF02472 Biopolymer transport protein ExbD/TolR AYR70_04290 PF01618 MotA/TolQ/ExbB proton channel family AYR70_04295 PF03061 Thioesterase superfamily AYR70_04300 PF07687 Peptidase dimerisation domain AYR70_04300 PF01546 Peptidase family M20/M25/M40 AYR70_04305 PF05491 RuvB C-terminal winged helix domain AYR70_04305 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYR70_04305 PF17864 RuvB AAA lid domain AYR70_04310 PF07499 RuvA, C-terminal domain AYR70_04310 PF01330 RuvA N terminal domain AYR70_04315 PF01966 HD domain AYR70_04320 PF02769 AIR synthase related protein, C-terminal domain AYR70_04320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AYR70_04320 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AYR70_04325 PF07690 Major Facilitator Superfamily AYR70_04335 PF01784 NIF3 (NGG1p interacting factor 3) AYR70_04340 PF00378 Enoyl-CoA hydratase/isomerase AYR70_04345 PF00293 NUDIX domain AYR70_04345 PF01467 Cytidylyltransferase-like AYR70_04355 PF00578 AhpC/TSA family AYR70_04370 PF06508 Queuosine biosynthesis protein QueC AYR70_04380 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_04380 PF14602 Hexapeptide repeat of succinyl-transferase AYR70_04380 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AYR70_04390 PF03466 LysR substrate binding domain AYR70_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_04395 PF12857 TOBE-like domain AYR70_04395 PF00005 ABC transporter AYR70_04400 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_04405 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_04420 PF01063 Amino-transferase class IV AYR70_04425 PF02618 YceG-like family AYR70_04430 PF02223 Thymidylate kinase AYR70_04440 PF00890 FAD binding domain AYR70_04440 PF02910 Fumarate reductase flavoprotein C-term AYR70_04445 PF13180 PDZ domain AYR70_04455 PF06421 GTP-binding protein LepA C-terminus AYR70_04455 PF03144 Elongation factor Tu domain 2 AYR70_04455 PF00009 Elongation factor Tu GTP binding domain AYR70_04455 PF00679 Elongation factor G C-terminus AYR70_04460 PF10502 Signal peptidase, peptidase S26 AYR70_04470 PF00035 Double-stranded RNA binding motif AYR70_04470 PF14622 Ribonuclease-III-like AYR70_04475 PF01926 50S ribosome-binding GTPase AYR70_04475 PF07650 KH domain AYR70_04485 PF11967 Recombination protein O N terminal AYR70_04485 PF02565 Recombination protein O C terminal AYR70_04490 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AYR70_04495 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AYR70_04500 PF00106 short chain dehydrogenase AYR70_04535 PF00990 Diguanylate cyclase, GGDEF domain AYR70_04535 PF17151 Periplasmic sensor domain AYR70_04545 PF17757 UvrB interaction domain AYR70_04545 PF12344 Ultra-violet resistance protein B AYR70_04545 PF00271 Helicase conserved C-terminal domain AYR70_04545 PF04851 Type III restriction enzyme, res subunit AYR70_04545 PF02151 UvrB/uvrC motif AYR70_04555 PF00892 EamA-like transporter family AYR70_04560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYR70_04560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR70_04575 PF01018 GTP1/OBG AYR70_04575 PF01926 50S ribosome-binding GTPase AYR70_04580 PF01472 PUA domain AYR70_04580 PF00696 Amino acid kinase family AYR70_04590 PF07759 Protein of unknown function (DUF1615) AYR70_04595 PF01207 Dihydrouridine synthase (Dus) AYR70_04600 PF03060 Nitronate monooxygenase AYR70_04615 PF02350 UDP-N-acetylglucosamine 2-epimerase AYR70_04645 PF03441 FAD binding domain of DNA photolyase AYR70_04645 PF00875 DNA photolyase AYR70_04650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR70_04655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_04660 PF07943 Penicillin-binding protein 5, C-terminal domain AYR70_04660 PF00768 D-alanyl-D-alanine carboxypeptidase AYR70_04670 PF03971 Monomeric isocitrate dehydrogenase AYR70_04675 PF00849 RNA pseudouridylate synthase AYR70_04680 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR70_04695 PF06779 Uncharacterised MFS-type transporter YbfB AYR70_04700 PF03466 LysR substrate binding domain AYR70_04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_04710 PF02567 Phenazine biosynthesis-like protein AYR70_04715 PF00675 Insulinase (Peptidase family M16) AYR70_04715 PF05193 Peptidase M16 inactive domain AYR70_04740 PF02581 Thiamine monophosphate synthase AYR70_04745 PF00202 Aminotransferase class-III AYR70_04755 PF00849 RNA pseudouridylate synthase AYR70_04760 PF00176 SNF2 family N-terminal domain AYR70_04760 PF12137 RNA polymerase recycling family C-terminal AYR70_04760 PF00271 Helicase conserved C-terminal domain AYR70_04760 PF18339 RapA N-terminal Tudor like domain 1 AYR70_04760 PF18337 RapA N-terminal Tudor like domain AYR70_04770 PF00440 Bacterial regulatory proteins, tetR family AYR70_04775 PF00175 Oxidoreductase NAD-binding domain AYR70_04775 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_04775 PF00970 Oxidoreductase FAD-binding domain AYR70_04780 PF00487 Fatty acid desaturase AYR70_04790 PF17754 MftR C-terminal domain AYR70_04790 PF00440 Bacterial regulatory proteins, tetR family AYR70_04800 PF00202 Aminotransferase class-III AYR70_04805 PF00282 Pyridoxal-dependent decarboxylase conserved domain AYR70_04810 PF00171 Aldehyde dehydrogenase family AYR70_04815 PF01037 Lrp/AsnC ligand binding domain AYR70_04820 PF00205 Thiamine pyrophosphate enzyme, central domain AYR70_04820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR70_04820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR70_04825 PF00324 Amino acid permease AYR70_04830 PF12849 PBP superfamily domain AYR70_04835 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_04840 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_04845 PF00005 ABC transporter AYR70_04850 PF08496 Peptidase family S49 N-terminal AYR70_04850 PF01343 Peptidase family S49 AYR70_04865 PF08328 Adenylosuccinate lyase C-terminal AYR70_04865 PF00206 Lyase AYR70_04870 PF04356 Protein of unknown function (DUF489) AYR70_04880 PF13344 Haloacid dehalogenase-like hydrolase AYR70_04880 PF00293 NUDIX domain AYR70_04885 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_04890 PF07943 Penicillin-binding protein 5, C-terminal domain AYR70_04890 PF00768 D-alanyl-D-alanine carboxypeptidase AYR70_04905 PF01975 Survival protein SurE AYR70_04910 PF01476 LysM domain AYR70_04910 PF01551 Peptidase family M23 AYR70_04915 PF03466 LysR substrate binding domain AYR70_04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_04920 PF05362 Lon protease (S16) C-terminal proteolytic domain AYR70_04920 PF13654 AAA domain AYR70_04925 PF07690 Major Facilitator Superfamily AYR70_04930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR70_04935 PF13593 SBF-like CPA transporter family (DUF4137) AYR70_04940 PF01197 Ribosomal protein L31 AYR70_04955 PF04055 Radical SAM superfamily AYR70_04960 PF08207 Elongation factor P (EF-P) KOW-like domain AYR70_04960 PF09285 Elongation factor P, C-terminal AYR70_04960 PF01132 Elongation factor P (EF-P) OB domain AYR70_04965 PF02554 Carbon starvation protein CstA AYR70_04965 PF13722 5TM C-terminal transporter carbon starvation CstA AYR70_04970 PF04328 Selenoprotein, putative AYR70_05000 PF17853 GGDEF-like domain AYR70_05000 PF06018 CodY GAF-like domain AYR70_05000 PF13556 PucR C-terminal helix-turn-helix domain AYR70_05015 PF00171 Aldehyde dehydrogenase family AYR70_05020 PF00324 Amino acid permease AYR70_05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_05025 PF03466 LysR substrate binding domain AYR70_05030 PF02028 BCCT, betaine/carnitine/choline family transporter AYR70_05035 PF02028 BCCT, betaine/carnitine/choline family transporter AYR70_05040 PF00355 Rieske [2Fe-2S] domain AYR70_05040 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR70_05050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_05050 PF18113 Rubredoxin binding C-terminal domain AYR70_05055 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AYR70_05055 PF01266 FAD dependent oxidoreductase AYR70_05075 PF00892 EamA-like transporter family AYR70_05085 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AYR70_05090 PF00083 Sugar (and other) transporter AYR70_05095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AYR70_05095 PF13378 Enolase C-terminal domain-like AYR70_05100 PF00698 Acyl transferase domain AYR70_05100 PF00550 Phosphopantetheine attachment site AYR70_05100 PF16197 Ketoacyl-synthetase C-terminal extension AYR70_05100 PF09277 Erythronolide synthase, docking AYR70_05100 PF08990 Erythronolide synthase docking AYR70_05100 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_05100 PF08659 KR domain AYR70_05100 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR70_05100 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR70_05100 PF14765 Polyketide synthase dehydratase AYR70_05105 PF00440 Bacterial regulatory proteins, tetR family AYR70_05120 PF02678 Pirin AYR70_05120 PF17954 Quercetinase C-terminal cupin domain AYR70_05130 PF08348 YheO-like PAS domain AYR70_05130 PF13309 HTH domain AYR70_05140 PF00550 Phosphopantetheine attachment site AYR70_05140 PF00668 Condensation domain AYR70_05140 PF13193 AMP-binding enzyme C-terminal domain AYR70_05140 PF00501 AMP-binding enzyme AYR70_05145 PF13193 AMP-binding enzyme C-terminal domain AYR70_05145 PF00975 Thioesterase domain AYR70_05145 PF00501 AMP-binding enzyme AYR70_05145 PF00550 Phosphopantetheine attachment site AYR70_05145 PF00668 Condensation domain AYR70_05150 PF01032 FecCD transport family AYR70_05155 PF01032 FecCD transport family AYR70_05160 PF00005 ABC transporter AYR70_05165 PF01497 Periplasmic binding protein AYR70_05170 PF00593 TonB dependent receptor AYR70_05170 PF07715 TonB-dependent Receptor Plug Domain AYR70_05175 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AYR70_05180 PF00550 Phosphopantetheine attachment site AYR70_05180 PF00501 AMP-binding enzyme AYR70_05180 PF00668 Condensation domain AYR70_05185 PF13193 AMP-binding enzyme C-terminal domain AYR70_05185 PF00501 AMP-binding enzyme AYR70_05190 PF00857 Isochorismatase family AYR70_05190 PF00550 Phosphopantetheine attachment site AYR70_05195 PF00282 Pyridoxal-dependent decarboxylase conserved domain AYR70_05205 PF00664 ABC transporter transmembrane region AYR70_05205 PF00005 ABC transporter AYR70_05210 PF00005 ABC transporter AYR70_05210 PF00664 ABC transporter transmembrane region AYR70_05215 PF00975 Thioesterase domain AYR70_05225 PF00425 chorismate binding enzyme AYR70_05235 PF01208 Uroporphyrinogen decarboxylase (URO-D) AYR70_05240 PF05675 Protein of unknown function (DUF817) AYR70_05255 PF00144 Beta-lactamase AYR70_05275 PF01799 [2Fe-2S] binding domain AYR70_05275 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_05280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AYR70_05280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AYR70_05295 PF00218 Indole-3-glycerol phosphate synthase AYR70_05300 PF02885 Glycosyl transferase family, helical bundle domain AYR70_05300 PF00591 Glycosyl transferase family, a/b domain AYR70_05305 PF07715 TonB-dependent Receptor Plug Domain AYR70_05305 PF00593 TonB dependent receptor AYR70_05310 PF01433 Peptidase family M1 domain AYR70_05310 PF11838 ERAP1-like C-terminal domain AYR70_05315 PF00117 Glutamine amidotransferase class-I AYR70_05325 PF00854 POT family AYR70_05335 PF04345 Chorismate lyase AYR70_05340 PF01040 UbiA prenyltransferase family AYR70_05375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYR70_05375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYR70_05380 PF01784 NIF3 (NGG1p interacting factor 3) AYR70_05385 PF13180 PDZ domain AYR70_05390 PF12627 Probable RNA and SrmB- binding site of polymerase A AYR70_05390 PF01743 Poly A polymerase head domain AYR70_05395 PF01515 Phosphate acetyl/butaryl transferase AYR70_05395 PF03949 Malic enzyme, NAD binding domain AYR70_05395 PF00390 Malic enzyme, N-terminal domain AYR70_05400 PF03707 Bacterial signalling protein N terminal repeat AYR70_05400 PF00990 Diguanylate cyclase, GGDEF domain AYR70_05400 PF00563 EAL domain AYR70_05405 PF04452 RNA methyltransferase AYR70_05410 PF02219 Methylenetetrahydrofolate reductase AYR70_05415 PF05221 S-adenosyl-L-homocysteine hydrolase AYR70_05415 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AYR70_05430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_05430 PF09317 Domain of unknown function (DUF1974) AYR70_05430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_05435 PF04055 Radical SAM superfamily AYR70_05440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR70_05440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_05455 PF07690 Major Facilitator Superfamily AYR70_05465 PF00557 Metallopeptidase family M24 AYR70_05470 PF00318 Ribosomal protein S2 AYR70_05475 PF00889 Elongation factor TS AYR70_05485 PF12833 Helix-turn-helix domain AYR70_05505 PF05036 Sporulation related domain AYR70_05505 PF03330 Lytic transglycolase AYR70_05510 PF13406 Transglycosylase SLT domain AYR70_05515 PF01098 Cell cycle protein AYR70_05525 PF14489 QueF-like protein AYR70_05525 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AYR70_05530 PF01061 ABC-2 type transporter AYR70_05535 PF00005 ABC transporter AYR70_05565 PF00464 Serine hydroxymethyltransferase AYR70_05570 PF02321 Outer membrane efflux protein AYR70_05575 PF00873 AcrB/AcrD/AcrF family AYR70_05580 PF13533 Biotin-lipoyl like AYR70_05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_05585 PF03466 LysR substrate binding domain AYR70_05590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR70_05595 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_05600 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_05605 PF00005 ABC transporter AYR70_05610 PF00893 Small Multidrug Resistance protein AYR70_05615 PF00037 4Fe-4S binding domain AYR70_05625 PF00155 Aminotransferase class I and II AYR70_05625 PF00392 Bacterial regulatory proteins, gntR family AYR70_05630 PF02567 Phenazine biosynthesis-like protein AYR70_05635 PF00970 Oxidoreductase FAD-binding domain AYR70_05635 PF00175 Oxidoreductase NAD-binding domain AYR70_05640 PF01980 tRNA-methyltransferase O AYR70_05640 PF18389 TrmO C-terminal domain AYR70_05650 PF00437 Type II/IV secretion system protein AYR70_05660 PF00072 Response regulator receiver domain AYR70_05660 PF00486 Transcriptional regulatory protein, C terminal AYR70_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_05665 PF08521 Two-component sensor kinase N-terminal AYR70_05665 PF00512 His Kinase A (phospho-acceptor) domain AYR70_05675 PF00293 NUDIX domain AYR70_05685 PF14814 Bifunctional transglycosylase second domain AYR70_05685 PF00905 Penicillin binding protein transpeptidase domain AYR70_05685 PF00912 Transglycosylase AYR70_05690 PF01513 ATP-NAD kinase AYR70_05695 PF07023 Protein of unknown function (DUF1315) AYR70_05700 PF00591 Glycosyl transferase family, a/b domain AYR70_05700 PF02885 Glycosyl transferase family, helical bundle domain AYR70_05705 PF00375 Sodium:dicarboxylate symporter family AYR70_05710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_05710 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_05710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_05715 PF00756 Putative esterase AYR70_05720 PF01817 Chorismate mutase type II AYR70_05720 PF01842 ACT domain AYR70_05720 PF00800 Prephenate dehydratase AYR70_05725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR70_05735 PF07687 Peptidase dimerisation domain AYR70_05735 PF01546 Peptidase family M20/M25/M40 AYR70_05740 PF12706 Beta-lactamase superfamily domain AYR70_05750 PF03883 Peroxide stress protein YaaA AYR70_05760 PF05690 Thiazole biosynthesis protein ThiG AYR70_05770 PF04241 Protein of unknown function (DUF423) AYR70_05775 PF00140 Sigma-70 factor, region 1.2 AYR70_05775 PF04542 Sigma-70 region 2 AYR70_05775 PF04545 Sigma-70, region 4 AYR70_05785 PF00313 'Cold-shock' DNA-binding domain AYR70_05790 PF00270 DEAD/DEAH box helicase AYR70_05790 PF00271 Helicase conserved C-terminal domain AYR70_05800 PF00881 Nitroreductase family AYR70_05805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYR70_05805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYR70_05825 PF01180 Dihydroorotate dehydrogenase AYR70_05830 PF02674 Colicin V production protein AYR70_05835 PF00156 Phosphoribosyl transferase domain AYR70_05850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR70_05850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR70_05855 PF01435 Peptidase family M48 AYR70_05860 PF09424 Yqey-like protein AYR70_05865 PF01165 Ribosomal protein S21 AYR70_05870 PF00814 Glycoprotease family AYR70_05890 PF00069 Protein kinase domain AYR70_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_05915 PF03466 LysR substrate binding domain AYR70_05920 PF00202 Aminotransferase class-III AYR70_05925 PF00171 Aldehyde dehydrogenase family AYR70_05930 PF00324 Amino acid permease AYR70_05960 PF04076 Bacterial OB fold (BOF) protein AYR70_05985 PF00561 alpha/beta hydrolase fold AYR70_05990 PF03616 Sodium/glutamate symporter AYR70_06000 PF07729 FCD domain AYR70_06000 PF00392 Bacterial regulatory proteins, gntR family AYR70_06050 PF08946 Osmosensory transporter coiled coil AYR70_06050 PF00083 Sugar (and other) transporter AYR70_06070 PF00155 Aminotransferase class I and II AYR70_06075 PF02080 TrkA-C domain AYR70_06075 PF06826 Predicted Permease Membrane Region AYR70_06085 PF04403 Paraquat-inducible protein A AYR70_06090 PF02470 MlaD protein AYR70_06100 PF01177 Asp/Glu/Hydantoin racemase AYR70_06105 PF00892 EamA-like transporter family AYR70_06110 PF07995 Glucose / Sorbosone dehydrogenase AYR70_06120 PF13610 DDE domain AYR70_06125 PF01636 Phosphotransferase enzyme family AYR70_06130 PF13610 DDE domain AYR70_06150 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_06155 PF01909 Nucleotidyltransferase domain AYR70_06155 PF13427 Domain of unknown function (DUF4111) AYR70_06160 PF00893 Small Multidrug Resistance protein AYR70_06165 PF00809 Pterin binding enzyme AYR70_06180 PF07091 Ribosomal RNA methyltransferase (FmrO) AYR70_06200 PF01636 Phosphotransferase enzyme family AYR70_06210 PF03050 Transposase IS66 family AYR70_06210 PF13817 IS66 C-terminal element AYR70_06210 PF13005 zinc-finger binding domain of transposase IS66 AYR70_06210 PF13007 Transposase C of IS166 homeodomain AYR70_06230 PF01051 Initiator Replication protein AYR70_06235 PF13610 DDE domain AYR70_06250 PF00375 Sodium:dicarboxylate symporter family AYR70_06260 PF16123 Hydroxyacylglutathione hydrolase C-terminus AYR70_06260 PF00753 Metallo-beta-lactamase superfamily AYR70_06265 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_06270 PF00005 ABC transporter AYR70_06270 PF09383 NIL domain AYR70_06275 PF03180 NLPA lipoprotein AYR70_06280 PF02843 Phosphoribosylglycinamide synthetase, C domain AYR70_06280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AYR70_06280 PF02844 Phosphoribosylglycinamide synthetase, N domain AYR70_06285 PF02142 MGS-like domain AYR70_06285 PF01808 AICARFT/IMPCHase bienzyme AYR70_06290 PF02954 Bacterial regulatory protein, Fis family AYR70_06310 PF01134 Glucose inhibited division protein A AYR70_06310 PF13932 GidA associated domain AYR70_06320 PF14403 Circularly permuted ATP-grasp type 2 AYR70_06330 PF01841 Transglutaminase-like superfamily AYR70_06330 PF08379 Bacterial transglutaminase-like N-terminal region AYR70_06340 PF00842 Alanine racemase, C-terminal domain AYR70_06340 PF01168 Alanine racemase, N-terminal domain AYR70_06345 PF00772 DnaB-like helicase N terminal domain AYR70_06345 PF03796 DnaB-like helicase C terminal domain AYR70_06350 PF01281 Ribosomal protein L9, N-terminal domain AYR70_06350 PF03948 Ribosomal protein L9, C-terminal domain AYR70_06355 PF01084 Ribosomal protein S18 AYR70_06360 PF01250 Ribosomal protein S6 AYR70_06365 PF01040 UbiA prenyltransferase family AYR70_06370 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AYR70_06375 PF00510 Cytochrome c oxidase subunit III AYR70_06380 PF00115 Cytochrome C and Quinol oxidase polypeptide I AYR70_06385 PF06481 COX Aromatic Rich Motif AYR70_06385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AYR70_06395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AYR70_06395 PF02896 PEP-utilising enzyme, TIM barrel domain AYR70_06395 PF00391 PEP-utilising enzyme, mobile domain AYR70_06400 PF03618 Kinase/pyrophosphorylase AYR70_06410 PF01522 Polysaccharide deacetylase AYR70_06410 PF14883 Hypothetical glycosyl hydrolase family 13 AYR70_06415 PF00535 Glycosyl transferase family 2 AYR70_06420 PF13994 PgaD-like protein AYR70_06430 PF00296 Luciferase-like monooxygenase AYR70_06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_06445 PF03466 LysR substrate binding domain AYR70_06455 PF00472 RF-1 domain AYR70_06455 PF03462 PCRF domain AYR70_06460 PF17827 PrmC N-terminal domain AYR70_06460 PF13847 Methyltransferase domain AYR70_06465 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_06470 PF09084 NMT1/THI5 like AYR70_06475 PF12833 Helix-turn-helix domain AYR70_06480 PF00106 short chain dehydrogenase AYR70_06485 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_06485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_06485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_06490 PF00501 AMP-binding enzyme AYR70_06490 PF13193 AMP-binding enzyme C-terminal domain AYR70_06495 PF01613 Flavin reductase like domain AYR70_06500 PF00899 ThiF family AYR70_06505 PF03109 ABC1 family AYR70_06520 PF03814 Potassium-transporting ATPase A subunit AYR70_06530 PF02669 K+-transporting ATPase, c chain AYR70_06535 PF02702 Osmosensitive K+ channel His kinase sensor domain AYR70_06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_06535 PF00512 His Kinase A (phospho-acceptor) domain AYR70_06535 PF13493 Domain of unknown function (DUF4118) AYR70_06540 PF00486 Transcriptional regulatory protein, C terminal AYR70_06540 PF00072 Response regulator receiver domain AYR70_06545 PF00120 Glutamine synthetase, catalytic domain AYR70_06555 PF03232 Ubiquinone biosynthesis protein COQ7 AYR70_06560 PF07690 Major Facilitator Superfamily AYR70_06565 PF01103 Surface antigen AYR70_06565 PF07244 Surface antigen variable number repeat AYR70_06565 PF17243 POTRA domain TamA domain 1 AYR70_06580 PF06434 Aconitate hydratase 2 N-terminus AYR70_06580 PF00330 Aconitase family (aconitate hydratase) AYR70_06580 PF11791 Aconitate B N-terminal domain AYR70_06590 PF00520 Ion transport protein AYR70_06590 PF00027 Cyclic nucleotide-binding domain AYR70_06595 PF07690 Major Facilitator Superfamily AYR70_06610 PF03466 LysR substrate binding domain AYR70_06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_06615 PF04284 Protein of unknown function (DUF441) AYR70_06625 PF00849 RNA pseudouridylate synthase AYR70_06625 PF01479 S4 domain AYR70_06640 PF00849 RNA pseudouridylate synthase AYR70_06640 PF01479 S4 domain AYR70_06645 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AYR70_06650 PF08676 MutL C terminal dimerisation domain AYR70_06650 PF01119 DNA mismatch repair protein, C-terminal domain AYR70_06660 PF17209 Hfq protein AYR70_06670 PF00881 Nitroreductase family AYR70_06680 PF00149 Calcineurin-like phosphoesterase AYR70_06685 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYR70_06690 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR70_06690 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AYR70_06695 PF02540 NAD synthase AYR70_06695 PF00958 GMP synthase C terminal domain AYR70_06695 PF00117 Glutamine amidotransferase class-I AYR70_06700 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AYR70_06705 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AYR70_06710 PF13520 Amino acid permease AYR70_06715 PF00171 Aldehyde dehydrogenase family AYR70_06730 PF00465 Iron-containing alcohol dehydrogenase AYR70_06735 PF05970 PIF1-like helicase AYR70_06735 PF14493 Helix-turn-helix domain AYR70_06745 PF06445 GyrI-like small molecule binding domain AYR70_06750 PF02110 Hydroxyethylthiazole kinase family AYR70_06765 PF01433 Peptidase family M1 domain AYR70_06765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AYR70_06765 PF11940 Domain of unknown function (DUF3458) Ig-like fold AYR70_06775 PF00106 short chain dehydrogenase AYR70_06785 PF01817 Chorismate mutase type II AYR70_06790 PF01037 Lrp/AsnC ligand binding domain AYR70_06800 PF00440 Bacterial regulatory proteins, tetR family AYR70_06805 PF00593 TonB dependent receptor AYR70_06805 PF07715 TonB-dependent Receptor Plug Domain AYR70_06810 PF00924 Mechanosensitive ion channel AYR70_06850 PF07715 TonB-dependent Receptor Plug Domain AYR70_06850 PF00593 TonB dependent receptor AYR70_06870 PF00005 ABC transporter AYR70_06870 PF12848 ABC transporter AYR70_06875 PF00582 Universal stress protein family AYR70_06895 PF00690 Cation transporter/ATPase, N-terminus AYR70_06895 PF00689 Cation transporting ATPase, C-terminus AYR70_06900 PF02308 MgtC family AYR70_06905 PF03594 Benzoate membrane transport protein AYR70_06910 PF01037 Lrp/AsnC ligand binding domain AYR70_06915 PF01810 LysE type translocator AYR70_06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_06925 PF03466 LysR substrate binding domain AYR70_06935 PF02803 Thiolase, C-terminal domain AYR70_06935 PF00108 Thiolase, N-terminal domain AYR70_06960 PF07690 Major Facilitator Superfamily AYR70_06965 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AYR70_06965 PF12169 DNA polymerase III subunits gamma and tau domain III AYR70_06965 PF12170 DNA polymerase III tau subunit V interacting with alpha AYR70_06970 PF04185 Phosphoesterase family AYR70_06970 PF05506 Domain of unknown function (DUF756) AYR70_06975 PF03061 Thioesterase superfamily AYR70_06980 PF00465 Iron-containing alcohol dehydrogenase AYR70_06990 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYR70_06995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AYR70_06995 PF01565 FAD binding domain AYR70_07010 PF01645 Conserved region in glutamate synthase AYR70_07120 PF01555 DNA methylase AYR70_07310 PF00872 Transposase, Mutator family AYR70_07400 PF13276 HTH-like domain AYR70_07400 PF00665 Integrase core domain AYR70_07400 PF13333 Integrase core domain AYR70_07410 PF12832 MFS_1 like family AYR70_07420 PF02785 Biotin carboxylase C-terminal domain AYR70_07420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR70_07420 PF00289 Biotin carboxylase, N-terminal domain AYR70_07425 PF00364 Biotin-requiring enzyme AYR70_07430 PF01220 Dehydroquinase class II AYR70_07435 PF11799 impB/mucB/samB family C-terminal domain AYR70_07435 PF13438 Domain of unknown function (DUF4113) AYR70_07435 PF00817 impB/mucB/samB family AYR70_07440 PF00005 ABC transporter AYR70_07445 PF00486 Transcriptional regulatory protein, C terminal AYR70_07445 PF00072 Response regulator receiver domain AYR70_07455 PF04324 BFD-like [2Fe-2S] binding domain AYR70_07455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYR70_07455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYR70_07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_07455 PF13806 Rieske-like [2Fe-2S] domain AYR70_07455 PF18267 Rubredoxin NAD+ reductase C-terminal domain AYR70_07460 PF04324 BFD-like [2Fe-2S] binding domain AYR70_07460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYR70_07460 PF18267 Rubredoxin NAD+ reductase C-terminal domain AYR70_07460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYR70_07460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_07465 PF00384 Molybdopterin oxidoreductase AYR70_07465 PF01568 Molydopterin dinucleotide binding domain AYR70_07465 PF04324 BFD-like [2Fe-2S] binding domain AYR70_07465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYR70_07470 PF12804 MobA-like NTP transferase domain AYR70_07475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYR70_07475 PF01568 Molydopterin dinucleotide binding domain AYR70_07475 PF00384 Molybdopterin oxidoreductase AYR70_07480 PF06463 Molybdenum Cofactor Synthesis C AYR70_07480 PF04055 Radical SAM superfamily AYR70_07490 PF02391 MoaE protein AYR70_07495 PF00994 Probable molybdopterin binding domain AYR70_07495 PF01967 MoaC family AYR70_07500 PF00994 Probable molybdopterin binding domain AYR70_07500 PF03454 MoeA C-terminal region (domain IV) AYR70_07500 PF03453 MoeA N-terminal region (domain I and II) AYR70_07505 PF01638 HxlR-like helix-turn-helix AYR70_07510 PF00392 Bacterial regulatory proteins, gntR family AYR70_07510 PF00155 Aminotransferase class I and II AYR70_07515 PF00892 EamA-like transporter family AYR70_07535 PF02635 DsrE/DsrF-like family AYR70_07540 PF16363 GDP-mannose 4,6 dehydratase AYR70_07545 PF00206 Lyase AYR70_07545 PF10415 Fumarase C C-terminus AYR70_07565 PF01266 FAD dependent oxidoreductase AYR70_07575 PF02542 YgbB family AYR70_07585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYR70_07585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYR70_07590 PF00440 Bacterial regulatory proteins, tetR family AYR70_07595 PF00158 Sigma-54 interaction domain AYR70_07595 PF02954 Bacterial regulatory protein, Fis family AYR70_07595 PF00072 Response regulator receiver domain AYR70_07600 PF00989 PAS fold AYR70_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_07600 PF00512 His Kinase A (phospho-acceptor) domain AYR70_07605 PF00919 Uncharacterized protein family UPF0004 AYR70_07605 PF18693 TRAM domain AYR70_07605 PF04055 Radical SAM superfamily AYR70_07610 PF00696 Amino acid kinase family AYR70_07615 PF01765 Ribosome recycling factor AYR70_07620 PF01255 Putative undecaprenyl diphosphate synthase AYR70_07630 PF13288 DXP reductoisomerase C-terminal domain AYR70_07630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AYR70_07630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AYR70_07635 PF13180 PDZ domain AYR70_07635 PF02163 Peptidase family M50 AYR70_07635 PF17820 PDZ domain AYR70_07640 PF01103 Surface antigen AYR70_07640 PF07244 Surface antigen variable number repeat AYR70_07650 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AYR70_07650 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_07655 PF07977 FabA-like domain AYR70_07660 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AYR70_07660 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_07675 PF02631 RecX family AYR70_07680 PF00154 recA bacterial DNA recombination protein AYR70_07685 PF01479 S4 domain AYR70_07690 PF13419 Haloacid dehalogenase-like hydrolase AYR70_07715 PF01037 Lrp/AsnC ligand binding domain AYR70_07720 PF00266 Aminotransferase class-V AYR70_07725 PF00324 Amino acid permease AYR70_07735 PF05922 Peptidase inhibitor I9 AYR70_07735 PF00082 Subtilase family AYR70_07740 PF00916 Sulfate permease family AYR70_07740 PF01740 STAS domain AYR70_07745 PF02586 SOS response associated peptidase (SRAP) AYR70_07750 PF07995 Glucose / Sorbosone dehydrogenase AYR70_07760 PF03707 Bacterial signalling protein N terminal repeat AYR70_07760 PF00990 Diguanylate cyclase, GGDEF domain AYR70_07760 PF00563 EAL domain AYR70_07780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR70_07780 PF02378 Phosphotransferase system, EIIC AYR70_07785 PF00294 pfkB family carbohydrate kinase AYR70_07790 PF05524 PEP-utilising enzyme, N-terminal AYR70_07790 PF00391 PEP-utilising enzyme, mobile domain AYR70_07790 PF02896 PEP-utilising enzyme, TIM barrel domain AYR70_07790 PF00381 PTS HPr component phosphorylation site AYR70_07790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR70_07815 PF05525 Branched-chain amino acid transport protein AYR70_07820 PF00557 Metallopeptidase family M24 AYR70_07825 PF03466 LysR substrate binding domain AYR70_07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_07835 PF00462 Glutaredoxin AYR70_07840 PF00202 Aminotransferase class-III AYR70_07845 PF00571 CBS domain AYR70_07845 PF00478 IMP dehydrogenase / GMP reductase domain AYR70_07870 PF02881 SRP54-type protein, helical bundle domain AYR70_07870 PF00448 SRP54-type protein, GTPase domain AYR70_07880 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AYR70_07895 PF08173 Membrane bound YbgT-like protein AYR70_07900 PF02322 Cytochrome bd terminal oxidase subunit II AYR70_07905 PF01654 Cytochrome bd terminal oxidase subunit I AYR70_07915 PF07290 Protein of unknown function (DUF1449) AYR70_07925 PF00294 pfkB family carbohydrate kinase AYR70_07930 PF00593 TonB dependent receptor AYR70_07930 PF07715 TonB-dependent Receptor Plug Domain AYR70_07935 PF05193 Peptidase M16 inactive domain AYR70_07935 PF00675 Insulinase (Peptidase family M16) AYR70_07935 PF08367 Peptidase M16C associated AYR70_07940 PF02253 Phospholipase A1 AYR70_07945 PF02386 Cation transport protein AYR70_07950 PF02080 TrkA-C domain AYR70_07950 PF02254 TrkA-N domain AYR70_07955 PF00585 C-terminal regulatory domain of Threonine dehydratase AYR70_07955 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_07960 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AYR70_07975 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR70_07975 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYR70_07985 PF02617 ATP-dependent Clp protease adaptor protein ClpS AYR70_07990 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_07990 PF02861 Clp amino terminal domain, pathogenicity island component AYR70_07990 PF10431 C-terminal, D2-small domain, of ClpB protein AYR70_07990 PF07724 AAA domain (Cdc48 subfamily) AYR70_07990 PF17871 AAA lid domain AYR70_07995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AYR70_08000 PF00793 DAHP synthetase I family AYR70_08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_08015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR70_08045 PF00117 Glutamine amidotransferase class-I AYR70_08045 PF06418 CTP synthase N-terminus AYR70_08050 PF00793 DAHP synthetase I family AYR70_08055 PF03952 Enolase, N-terminal domain AYR70_08055 PF00113 Enolase, C-terminal TIM barrel domain AYR70_08060 PF04239 Protein of unknown function (DUF421) AYR70_08065 PF04977 Septum formation initiator AYR70_08070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AYR70_08075 PF01144 Coenzyme A transferase AYR70_08080 PF01144 Coenzyme A transferase AYR70_08085 PF02803 Thiolase, C-terminal domain AYR70_08085 PF00108 Thiolase, N-terminal domain AYR70_08090 PF10397 Adenylosuccinate lyase C-terminus AYR70_08090 PF00206 Lyase AYR70_08095 PF00561 alpha/beta hydrolase fold AYR70_08100 PF07690 Major Facilitator Superfamily AYR70_08105 PF02627 Carboxymuconolactone decarboxylase family AYR70_08110 PF00775 Dioxygenase AYR70_08110 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AYR70_08115 PF00775 Dioxygenase AYR70_08120 PF01487 Type I 3-dehydroquinase AYR70_08125 PF05048 Periplasmic copper-binding protein (NosD) AYR70_08130 PF04966 Carbohydrate-selective porin, OprB family AYR70_08135 PF13360 PQQ-like domain AYR70_08135 PF01011 PQQ enzyme repeat AYR70_08145 PF04143 Sulphur transport AYR70_08155 PF00753 Metallo-beta-lactamase superfamily AYR70_08160 PF09339 IclR helix-turn-helix domain AYR70_08160 PF01614 Bacterial transcriptional regulator AYR70_08165 PF03466 LysR substrate binding domain AYR70_08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_08170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_08170 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_08170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_08185 PF00106 short chain dehydrogenase AYR70_08195 PF07690 Major Facilitator Superfamily AYR70_08205 PF01425 Amidase AYR70_08210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR70_08225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR70_08225 PF00355 Rieske [2Fe-2S] domain AYR70_08240 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_08240 PF00175 Oxidoreductase NAD-binding domain AYR70_08245 PF01613 Flavin reductase like domain AYR70_08250 PF12833 Helix-turn-helix domain AYR70_08250 PF02311 AraC-like ligand binding domain AYR70_08255 PF02728 Copper amine oxidase, N3 domain AYR70_08255 PF02727 Copper amine oxidase, N2 domain AYR70_08255 PF07833 Copper amine oxidase N-terminal domain AYR70_08255 PF01179 Copper amine oxidase, enzyme domain AYR70_08265 PF00171 Aldehyde dehydrogenase family AYR70_08270 PF01804 Penicillin amidase AYR70_08275 PF12146 Serine aminopeptidase, S33 AYR70_08280 PF02803 Thiolase, C-terminal domain AYR70_08280 PF00108 Thiolase, N-terminal domain AYR70_08285 PF01144 Coenzyme A transferase AYR70_08290 PF01144 Coenzyme A transferase AYR70_08295 PF00775 Dioxygenase AYR70_08295 PF04444 Catechol dioxygenase N terminus AYR70_08300 PF02426 Muconolactone delta-isomerase AYR70_08305 PF13378 Enolase C-terminal domain-like AYR70_08305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AYR70_08310 PF03466 LysR substrate binding domain AYR70_08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_08320 PF07729 FCD domain AYR70_08320 PF00392 Bacterial regulatory proteins, gntR family AYR70_08325 PF00920 Dehydratase family AYR70_08330 PF07690 Major Facilitator Superfamily AYR70_08340 PF00171 Aldehyde dehydrogenase family AYR70_08360 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_08360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_08360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_08370 PF00158 Sigma-54 interaction domain AYR70_08370 PF02954 Bacterial regulatory protein, Fis family AYR70_08370 PF06506 Propionate catabolism activator AYR70_08375 PF13193 AMP-binding enzyme C-terminal domain AYR70_08375 PF00501 AMP-binding enzyme AYR70_08380 PF04341 Protein of unknown function, DUF485 AYR70_08385 PF00474 Sodium:solute symporter family AYR70_08390 PF00107 Zinc-binding dehydrogenase AYR70_08390 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_08395 PF00171 Aldehyde dehydrogenase family AYR70_08405 PF00561 alpha/beta hydrolase fold AYR70_08410 PF06628 Catalase-related immune-responsive AYR70_08410 PF00199 Catalase AYR70_08430 PF07859 alpha/beta hydrolase fold AYR70_08435 PF01047 MarR family AYR70_08440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR70_08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_08445 PF00106 short chain dehydrogenase AYR70_08450 PF01872 RibD C-terminal domain AYR70_08455 PF09278 MerR, DNA binding AYR70_08455 PF00376 MerR family regulatory protein AYR70_08465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_08475 PF12706 Beta-lactamase superfamily domain AYR70_08480 PF00440 Bacterial regulatory proteins, tetR family AYR70_08480 PF08359 YsiA-like protein, C-terminal region AYR70_08490 PF00857 Isochorismatase family AYR70_08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_08495 PF03466 LysR substrate binding domain AYR70_08500 PF07995 Glucose / Sorbosone dehydrogenase AYR70_08505 PF00999 Sodium/hydrogen exchanger family AYR70_08505 PF02254 TrkA-N domain AYR70_08515 PF01546 Peptidase family M20/M25/M40 AYR70_08515 PF07687 Peptidase dimerisation domain AYR70_08525 PF17287 POTRA domain AYR70_08525 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AYR70_08525 PF08479 POTRA domain, ShlB-type AYR70_08530 PF05860 haemagglutination activity domain AYR70_08530 PF13018 Extended Signal Peptide of Type V secretion system AYR70_08530 PF13332 Hemagglutinin repeat AYR70_08530 PF04829 Pre-toxin domain with VENN motif AYR70_08545 PF07690 Major Facilitator Superfamily AYR70_08550 PF04909 Amidohydrolase AYR70_08565 PF08450 SMP-30/Gluconolactonase/LRE-like region AYR70_08575 PF03466 LysR substrate binding domain AYR70_08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_08595 PF07690 Major Facilitator Superfamily AYR70_08600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR70_08600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR70_08600 PF01842 ACT domain AYR70_08605 PF03737 Aldolase/RraA AYR70_08625 PF00529 HlyD membrane-fusion protein of T1SS AYR70_08625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_08640 PF00171 Aldehyde dehydrogenase family AYR70_08645 PF00920 Dehydratase family AYR70_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_08655 PF03466 LysR substrate binding domain AYR70_08660 PF01370 NAD dependent epimerase/dehydratase family AYR70_08665 PF07690 Major Facilitator Superfamily AYR70_08670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR70_08670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR70_08675 PF12833 Helix-turn-helix domain AYR70_08675 PF06719 AraC-type transcriptional regulator N-terminus AYR70_08690 PF00107 Zinc-binding dehydrogenase AYR70_08690 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_08705 PF00005 ABC transporter AYR70_08725 PF14572 Phosphoribosyl synthetase-associated domain AYR70_08725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYR70_08730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYR70_08800 PF00196 Bacterial regulatory proteins, luxR family AYR70_08805 PF01425 Amidase AYR70_08815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_08815 PF00529 HlyD membrane-fusion protein of T1SS AYR70_08820 PF00873 AcrB/AcrD/AcrF family AYR70_08825 PF02321 Outer membrane efflux protein AYR70_08830 PF12146 Serine aminopeptidase, S33 AYR70_08835 PF00743 Flavin-binding monooxygenase-like AYR70_08840 PF01593 Flavin containing amine oxidoreductase AYR70_08855 PF01266 FAD dependent oxidoreductase AYR70_08875 PF16970 Type-1 fimbrial protein, A AYR70_08890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYR70_08890 PF02753 Pili assembly chaperone PapD, C-terminal domain AYR70_08895 PF13954 PapC N-terminal domain AYR70_08895 PF13953 PapC C-terminal domain AYR70_08895 PF00577 Outer membrane usher protein AYR70_08900 PF00419 Fimbrial protein AYR70_08910 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_08910 PF00107 Zinc-binding dehydrogenase AYR70_08920 PF00199 Catalase AYR70_08935 PF13091 PLD-like domain AYR70_08955 PF01244 Membrane dipeptidase (Peptidase family M19) AYR70_08960 PF04055 Radical SAM superfamily AYR70_08960 PF13186 Iron-sulfur cluster-binding domain AYR70_08965 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AYR70_08970 PF03070 TENA/THI-4/PQQC family AYR70_08975 PF12706 Beta-lactamase superfamily domain AYR70_08980 PF17941 Polyphosphate kinase C-terminal domain 1 AYR70_08980 PF13089 Polyphosphate kinase N-terminal domain AYR70_08980 PF13090 Polyphosphate kinase C-terminal domain 2 AYR70_08980 PF02503 Polyphosphate kinase middle domain AYR70_08985 PF00149 Calcineurin-like phosphoesterase AYR70_08995 PF00857 Isochorismatase family AYR70_08995 PF00550 Phosphopantetheine attachment site AYR70_09000 PF00106 short chain dehydrogenase AYR70_09005 PF00005 ABC transporter AYR70_09005 PF03459 TOBE domain AYR70_09010 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_09020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_09020 PF03459 TOBE domain AYR70_09025 PF00355 Rieske [2Fe-2S] domain AYR70_09025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR70_09030 PF00866 Ring hydroxylating beta subunit AYR70_09035 PF00175 Oxidoreductase NAD-binding domain AYR70_09035 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_09035 PF00970 Oxidoreductase FAD-binding domain AYR70_09040 PF12833 Helix-turn-helix domain AYR70_09040 PF14525 AraC-binding-like domain AYR70_09050 PF01613 Flavin reductase like domain AYR70_09065 PF01738 Dienelactone hydrolase family AYR70_09070 PF07690 Major Facilitator Superfamily AYR70_09075 PF06719 AraC-type transcriptional regulator N-terminus AYR70_09075 PF12833 Helix-turn-helix domain AYR70_09105 PF03466 LysR substrate binding domain AYR70_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_09110 PF01144 Coenzyme A transferase AYR70_09115 PF01144 Coenzyme A transferase AYR70_09120 PF02667 Short chain fatty acid transporter AYR70_09125 PF00108 Thiolase, N-terminal domain AYR70_09125 PF02803 Thiolase, C-terminal domain AYR70_09130 PF03466 LysR substrate binding domain AYR70_09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_09135 PF03466 LysR substrate binding domain AYR70_09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_09150 PF10415 Fumarase C C-terminus AYR70_09150 PF00206 Lyase AYR70_09155 PF07715 TonB-dependent Receptor Plug Domain AYR70_09155 PF00593 TonB dependent receptor AYR70_09160 PF00083 Sugar (and other) transporter AYR70_09175 PF00005 ABC transporter AYR70_09180 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_09185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AYR70_09210 PF02525 Flavodoxin-like fold AYR70_09215 PF01638 HxlR-like helix-turn-helix AYR70_09220 PF12833 Helix-turn-helix domain AYR70_09220 PF06445 GyrI-like small molecule binding domain AYR70_09235 PF01925 Sulfite exporter TauE/SafE AYR70_09240 PF04273 Putative phosphatase (DUF442) AYR70_09240 PF00753 Metallo-beta-lactamase superfamily AYR70_09245 PF04273 Putative phosphatase (DUF442) AYR70_09245 PF00753 Metallo-beta-lactamase superfamily AYR70_09250 PF00072 Response regulator receiver domain AYR70_09250 PF02954 Bacterial regulatory protein, Fis family AYR70_09250 PF00158 Sigma-54 interaction domain AYR70_09255 PF01062 Bestrophin, RFP-TM, chloride channel AYR70_09260 PF00107 Zinc-binding dehydrogenase AYR70_09260 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_09265 PF00106 short chain dehydrogenase AYR70_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_09270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR70_09275 PF02817 e3 binding domain AYR70_09275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYR70_09275 PF00364 Biotin-requiring enzyme AYR70_09280 PF02779 Transketolase, pyrimidine binding domain AYR70_09280 PF02780 Transketolase, C-terminal domain AYR70_09285 PF00676 Dehydrogenase E1 component AYR70_09290 PF04055 Radical SAM superfamily AYR70_09305 PF08448 PAS fold AYR70_09305 PF00990 Diguanylate cyclase, GGDEF domain AYR70_09310 PF01264 Chorismate synthase AYR70_09315 PF05175 Methyltransferase small domain AYR70_09320 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_09330 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_09330 PF17862 AAA+ lid domain AYR70_09330 PF01434 Peptidase family M41 AYR70_09340 PF05166 YcgL domain AYR70_09360 PF01612 3'-5' exonuclease AYR70_09360 PF00570 HRDC domain AYR70_09365 PF02132 RecR protein AYR70_09365 PF13662 Toprim domain AYR70_09370 PF02575 YbaB/EbfC DNA-binding family AYR70_09380 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR70_09385 PF00561 alpha/beta hydrolase fold AYR70_09390 PF08241 Methyltransferase domain AYR70_09420 PF01230 HIT domain AYR70_09455 PF00005 ABC transporter AYR70_09460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_09470 PF02684 Lipid-A-disaccharide synthetase AYR70_09475 PF00593 TonB dependent receptor AYR70_09475 PF07715 TonB-dependent Receptor Plug Domain AYR70_09490 PF00872 Transposase, Mutator family AYR70_09500 PF01925 Sulfite exporter TauE/SafE AYR70_09505 PF00793 DAHP synthetase I family AYR70_09510 PF02654 Cobalamin-5-phosphate synthase AYR70_09525 PF02277 Phosphoribosyltransferase AYR70_09530 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AYR70_09540 PF13419 Haloacid dehalogenase-like hydrolase AYR70_09565 PF00593 TonB dependent receptor AYR70_09565 PF07715 TonB-dependent Receptor Plug Domain AYR70_09580 PF06276 Ferric iron reductase FhuF-like transporter AYR70_09580 PF04183 IucA / IucC family AYR70_09585 PF04183 IucA / IucC family AYR70_09585 PF06276 Ferric iron reductase FhuF-like transporter AYR70_09590 PF07690 Major Facilitator Superfamily AYR70_09595 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AYR70_09600 PF06276 Ferric iron reductase FhuF-like transporter AYR70_09600 PF04183 IucA / IucC family AYR70_09605 PF04073 Aminoacyl-tRNA editing domain AYR70_09615 PF03109 ABC1 family AYR70_09620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_09620 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_09620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_09625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_09625 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_09630 PF00487 Fatty acid desaturase AYR70_09635 PF12852 Cupin AYR70_09635 PF12833 Helix-turn-helix domain AYR70_09640 PF00639 PPIC-type PPIASE domain AYR70_09640 PF09312 SurA N-terminal domain AYR70_09645 PF00216 Bacterial DNA-binding protein AYR70_09660 PF02082 Transcriptional regulator AYR70_09665 PF00266 Aminotransferase class-V AYR70_09670 PF01592 NifU-like N terminal domain AYR70_09675 PF01521 Iron-sulphur cluster biosynthesis AYR70_09680 PF00226 DnaJ domain AYR70_09680 PF07743 HSCB C-terminal oligomerisation domain AYR70_09685 PF00012 Hsp70 protein AYR70_09690 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_09695 PF00211 Adenylate and Guanylate cyclase catalytic domain AYR70_09705 PF00271 Helicase conserved C-terminal domain AYR70_09705 PF03461 TRCF domain AYR70_09705 PF17757 UvrB interaction domain AYR70_09705 PF02559 CarD-like/TRCF domain AYR70_09705 PF00270 DEAD/DEAH box helicase AYR70_09725 PF03737 Aldolase/RraA AYR70_09730 PF13460 NAD(P)H-binding AYR70_09735 PF01649 Ribosomal protein S20 AYR70_09745 PF00459 Inositol monophosphatase family AYR70_09770 PF00005 ABC transporter AYR70_09770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYR70_09775 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_09780 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_09785 PF01432 Peptidase family M3 AYR70_09800 PF07715 TonB-dependent Receptor Plug Domain AYR70_09800 PF00593 TonB dependent receptor AYR70_09810 PF01618 MotA/TolQ/ExbB proton channel family AYR70_09815 PF02472 Biopolymer transport protein ExbD/TolR AYR70_09820 PF02472 Biopolymer transport protein ExbD/TolR AYR70_09830 PF01274 Malate synthase AYR70_09835 PF03969 AFG1-like ATPase AYR70_09845 PF00743 Flavin-binding monooxygenase-like AYR70_09855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AYR70_09865 PF00216 Bacterial DNA-binding protein AYR70_09870 PF00575 S1 RNA binding domain AYR70_09875 PF02224 Cytidylate kinase AYR70_09885 PF14437 MafB19-like deaminase AYR70_09895 PF03167 Uracil DNA glycosylase superfamily AYR70_09905 PF03934 Type II secretion system (T2SS), protein K AYR70_09910 PF07963 Prokaryotic N-terminal methylation motif AYR70_09910 PF11612 Type II secretion system (T2SS), protein J AYR70_09915 PF02501 Type II secretion system (T2SS), protein I AYR70_09915 PF07963 Prokaryotic N-terminal methylation motif AYR70_09930 PF01026 TatD related DNase AYR70_09940 PF09115 DNA polymerase III, delta subunit, C terminal AYR70_09945 PF02348 Cytidylyltransferase AYR70_09950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AYR70_09955 PF00005 ABC transporter AYR70_09955 PF00664 ABC transporter transmembrane region AYR70_09965 PF01618 MotA/TolQ/ExbB proton channel family AYR70_09970 PF02195 ParB-like nuclease domain AYR70_09970 PF17762 HTH domain found in ParB protein AYR70_09975 PF13614 AAA domain AYR70_09980 PF02527 rRNA small subunit methyltransferase G AYR70_09985 PF00483 Nucleotidyl transferase AYR70_09990 PF01636 Phosphotransferase enzyme family AYR70_09995 PF04453 LPS transport system D AYR70_09995 PF03968 OstA-like protein AYR70_10000 PF00639 PPIC-type PPIASE domain AYR70_10000 PF09312 SurA N-terminal domain AYR70_10005 PF01116 Fructose-bisphosphate aldolase class-II AYR70_10015 PF00162 Phosphoglycerate kinase AYR70_10025 PF02545 Maf-like protein AYR70_10030 PF08007 Cupin superfamily protein AYR70_10045 PF00375 Sodium:dicarboxylate symporter family AYR70_10050 PF06912 Protein of unknown function (DUF1275) AYR70_10055 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AYR70_10060 PF00664 ABC transporter transmembrane region AYR70_10060 PF00005 ABC transporter AYR70_10070 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYR70_10070 PF12833 Helix-turn-helix domain AYR70_10075 PF01597 Glycine cleavage H-protein AYR70_10080 PF02146 Sir2 family AYR70_10085 PF00474 Sodium:solute symporter family AYR70_10090 PF01037 Lrp/AsnC ligand binding domain AYR70_10095 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AYR70_10095 PF01619 Proline dehydrogenase AYR70_10095 PF00171 Aldehyde dehydrogenase family AYR70_10095 PF14850 DNA-binding domain of Proline dehydrogenase AYR70_10100 PF04229 GrpB protein AYR70_10105 PF05958 tRNA (Uracil-5-)-methyltransferase AYR70_10115 PF09992 Phosphodiester glycosidase AYR70_10125 PF04264 YceI-like domain AYR70_10135 PF02780 Transketolase, C-terminal domain AYR70_10135 PF00456 Transketolase, thiamine diphosphate binding domain AYR70_10135 PF02779 Transketolase, pyrimidine binding domain AYR70_10140 PF02773 S-adenosylmethionine synthetase, C-terminal domain AYR70_10140 PF00438 S-adenosylmethionine synthetase, N-terminal domain AYR70_10140 PF02772 S-adenosylmethionine synthetase, central domain AYR70_10160 PF00905 Penicillin binding protein transpeptidase domain AYR70_10175 PF02075 Crossover junction endodeoxyribonuclease RuvC AYR70_10180 PF03853 YjeF-related protein N-terminus AYR70_10180 PF01256 Carbohydrate kinase AYR70_10185 PF08331 Domain of unknown function (DUF1730) AYR70_10190 PF06968 Biotin and Thiamin Synthesis associated domain AYR70_10190 PF04055 Radical SAM superfamily AYR70_10205 PF16970 Type-1 fimbrial protein, A AYR70_10210 PF02753 Pili assembly chaperone PapD, C-terminal domain AYR70_10210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYR70_10215 PF00577 Outer membrane usher protein AYR70_10215 PF13953 PapC C-terminal domain AYR70_10215 PF13954 PapC N-terminal domain AYR70_10235 PF00892 EamA-like transporter family AYR70_10245 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYR70_10255 PF03466 LysR substrate binding domain AYR70_10255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10275 PF00440 Bacterial regulatory proteins, tetR family AYR70_10285 PF01709 Transcriptional regulator AYR70_10290 PF01037 Lrp/AsnC ligand binding domain AYR70_10300 PF00005 ABC transporter AYR70_10305 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_10310 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_10325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR70_10325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_10335 PF00296 Luciferase-like monooxygenase AYR70_10340 PF03180 NLPA lipoprotein AYR70_10345 PF03180 NLPA lipoprotein AYR70_10350 PF00005 ABC transporter AYR70_10350 PF09383 NIL domain AYR70_10355 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_10360 PF06071 Protein of unknown function (DUF933) AYR70_10360 PF01926 50S ribosome-binding GTPase AYR70_10385 PF03591 AzlC protein AYR70_10390 PF05437 Branched-chain amino acid transport protein (AzlD) AYR70_10400 PF02222 ATP-grasp domain AYR70_10405 PF01909 Nucleotidyltransferase domain AYR70_10405 PF01966 HD domain AYR70_10405 PF08335 GlnD PII-uridylyltransferase AYR70_10410 PF00155 Aminotransferase class I and II AYR70_10420 PF12833 Helix-turn-helix domain AYR70_10420 PF12852 Cupin AYR70_10425 PF00255 Glutathione peroxidase AYR70_10430 PF01641 SelR domain AYR70_10435 PF00155 Aminotransferase class I and II AYR70_10440 PF00375 Sodium:dicarboxylate symporter family AYR70_10445 PF00710 Asparaginase, N-terminal AYR70_10445 PF17763 Glutaminase/Asparaginase C-terminal domain AYR70_10450 PF02811 PHP domain AYR70_10450 PF14579 Helix-hairpin-helix motif AYR70_10450 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYR70_10450 PF01336 OB-fold nucleic acid binding domain AYR70_10450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYR70_10455 PF00588 SpoU rRNA Methylase family AYR70_10460 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_10475 PF13192 Thioredoxin domain AYR70_10475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_10490 PF03466 LysR substrate binding domain AYR70_10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10495 PF01758 Sodium Bile acid symporter family AYR70_10500 PF01022 Bacterial regulatory protein, arsR family AYR70_10515 PF03960 ArsC family AYR70_10525 PF13382 Adenine deaminase C-terminal domain AYR70_10525 PF01979 Amidohydrolase family AYR70_10535 PF03466 LysR substrate binding domain AYR70_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10545 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYR70_10550 PF01177 Asp/Glu/Hydantoin racemase AYR70_10555 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AYR70_10560 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_10565 PF00005 ABC transporter AYR70_10570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AYR70_10580 PF00083 Sugar (and other) transporter AYR70_10585 PF00296 Luciferase-like monooxygenase AYR70_10590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_10590 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_10590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR70_10600 PF01654 Cytochrome bd terminal oxidase subunit I AYR70_10605 PF02322 Cytochrome bd terminal oxidase subunit II AYR70_10615 PF00155 Aminotransferase class I and II AYR70_10615 PF00392 Bacterial regulatory proteins, gntR family AYR70_10620 PF03466 LysR substrate binding domain AYR70_10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10635 PF00698 Acyl transferase domain AYR70_10640 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AYR70_10650 PF01039 Carboxyl transferase domain AYR70_10655 PF06857 Malonate decarboxylase delta subunit (MdcD) AYR70_10660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AYR70_10665 PF16957 Malonate decarboxylase, alpha subunit, transporter AYR70_10670 PF07690 Major Facilitator Superfamily AYR70_10685 PF00155 Aminotransferase class I and II AYR70_10685 PF00392 Bacterial regulatory proteins, gntR family AYR70_10690 PF04172 LrgB-like family AYR70_10695 PF03788 LrgA family AYR70_10700 PF03466 LysR substrate binding domain AYR70_10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10705 PF14834 Glutathione S-transferase, C-terminal domain AYR70_10705 PF02798 Glutathione S-transferase, N-terminal domain AYR70_10710 PF02798 Glutathione S-transferase, N-terminal domain AYR70_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10715 PF03466 LysR substrate binding domain AYR70_10725 PF00581 Rhodanese-like domain AYR70_10730 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_10740 PF00266 Aminotransferase class-V AYR70_10745 PF01810 LysE type translocator AYR70_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10750 PF03466 LysR substrate binding domain AYR70_10755 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR70_10760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR70_10765 PF00005 ABC transporter AYR70_10770 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_10775 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_10785 PF00072 Response regulator receiver domain AYR70_10790 PF00072 Response regulator receiver domain AYR70_10790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_10790 PF09308 LuxQ, periplasmic AYR70_10790 PF00512 His Kinase A (phospho-acceptor) domain AYR70_10800 PF01037 Lrp/AsnC ligand binding domain AYR70_10800 PF13404 AsnC-type helix-turn-helix domain AYR70_10810 PF00717 Peptidase S24-like AYR70_10835 PF06628 Catalase-related immune-responsive AYR70_10835 PF18011 C-terminal domain found in long catalases AYR70_10835 PF00199 Catalase AYR70_10845 PF02464 Competence-damaged protein AYR70_10845 PF18146 Damage-inducible protein CinA KH domain AYR70_10845 PF00994 Probable molybdopterin binding domain AYR70_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10880 PF03466 LysR substrate binding domain AYR70_10900 PF13193 AMP-binding enzyme C-terminal domain AYR70_10900 PF00501 AMP-binding enzyme AYR70_10905 PF00440 Bacterial regulatory proteins, tetR family AYR70_10910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_10910 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_10910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_10915 PF01039 Carboxyl transferase domain AYR70_10920 PF00378 Enoyl-CoA hydratase/isomerase AYR70_10925 PF00289 Biotin carboxylase, N-terminal domain AYR70_10925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR70_10925 PF00364 Biotin-requiring enzyme AYR70_10925 PF02785 Biotin carboxylase C-terminal domain AYR70_10930 PF00682 HMGL-like AYR70_10935 PF03466 LysR substrate binding domain AYR70_10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_10950 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_10950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_10950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_10950 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYR70_10960 PF07690 Major Facilitator Superfamily AYR70_10970 PF01144 Coenzyme A transferase AYR70_10975 PF01144 Coenzyme A transferase AYR70_10980 PF07690 Major Facilitator Superfamily AYR70_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_10985 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_10990 PF00378 Enoyl-CoA hydratase/isomerase AYR70_11000 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AYR70_11000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR70_11000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR70_11005 PF00108 Thiolase, N-terminal domain AYR70_11005 PF02803 Thiolase, C-terminal domain AYR70_11010 PF09339 IclR helix-turn-helix domain AYR70_11015 PF07690 Major Facilitator Superfamily AYR70_11020 PF03060 Nitronate monooxygenase AYR70_11025 PF00378 Enoyl-CoA hydratase/isomerase AYR70_11030 PF09339 IclR helix-turn-helix domain AYR70_11035 PF02515 CoA-transferase family III AYR70_11040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_11040 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_11040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_11045 PF07690 Major Facilitator Superfamily AYR70_11050 PF13419 Haloacid dehalogenase-like hydrolase AYR70_11055 PF00266 Aminotransferase class-V AYR70_11060 PF01266 FAD dependent oxidoreductase AYR70_11065 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_11070 PF00005 ABC transporter AYR70_11070 PF08402 TOBE domain AYR70_11080 PF00392 Bacterial regulatory proteins, gntR family AYR70_11080 PF07702 UTRA domain AYR70_11085 PF01494 FAD binding domain AYR70_11090 PF01614 Bacterial transcriptional regulator AYR70_11090 PF09339 IclR helix-turn-helix domain AYR70_11095 PF02525 Flavodoxin-like fold AYR70_11100 PF03466 LysR substrate binding domain AYR70_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_11105 PF02627 Carboxymuconolactone decarboxylase family AYR70_11110 PF00171 Aldehyde dehydrogenase family AYR70_11120 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYR70_11125 PF00171 Aldehyde dehydrogenase family AYR70_11130 PF00296 Luciferase-like monooxygenase AYR70_11135 PF01613 Flavin reductase like domain AYR70_11140 PF12697 Alpha/beta hydrolase family AYR70_11160 PF01292 Prokaryotic cytochrome b561 AYR70_11165 PF00199 Catalase AYR70_11200 PF03061 Thioesterase superfamily AYR70_11205 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_11210 PF07848 PaaX-like protein AYR70_11210 PF08223 PaaX-like protein C-terminal domain AYR70_11215 PF14535 AMP-binding enzyme C-terminal domain AYR70_11215 PF00501 AMP-binding enzyme AYR70_11220 PF00108 Thiolase, N-terminal domain AYR70_11220 PF02803 Thiolase, C-terminal domain AYR70_11225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR70_11225 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AYR70_11225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR70_11230 PF00378 Enoyl-CoA hydratase/isomerase AYR70_11235 PF00378 Enoyl-CoA hydratase/isomerase AYR70_11240 PF00175 Oxidoreductase NAD-binding domain AYR70_11240 PF00970 Oxidoreductase FAD-binding domain AYR70_11240 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_11245 PF01883 Iron-sulfur cluster assembly protein AYR70_11250 PF05138 Phenylacetic acid catabolic protein AYR70_11255 PF06243 Phenylacetic acid degradation B AYR70_11260 PF05138 Phenylacetic acid catabolic protein AYR70_11265 PF01575 MaoC like domain AYR70_11265 PF00171 Aldehyde dehydrogenase family AYR70_11270 PF03313 Serine dehydratase alpha chain AYR70_11270 PF03315 Serine dehydratase beta chain AYR70_11275 PF13520 Amino acid permease AYR70_11280 PF00171 Aldehyde dehydrogenase family AYR70_11285 PF00083 Sugar (and other) transporter AYR70_11295 PF04324 BFD-like [2Fe-2S] binding domain AYR70_11295 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_11305 PF01266 FAD dependent oxidoreductase AYR70_11310 PF05544 Proline racemase AYR70_11315 PF00392 Bacterial regulatory proteins, gntR family AYR70_11325 PF00701 Dihydrodipicolinate synthetase family AYR70_11335 PF00376 MerR family regulatory protein AYR70_11335 PF09278 MerR, DNA binding AYR70_11355 PF02677 Epoxyqueuosine reductase QueH AYR70_11370 PF07690 Major Facilitator Superfamily AYR70_11375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYR70_11385 PF03466 LysR substrate binding domain AYR70_11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_11415 PF07724 AAA domain (Cdc48 subfamily) AYR70_11415 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_11415 PF17871 AAA lid domain AYR70_11415 PF10431 C-terminal, D2-small domain, of ClpB protein AYR70_11425 PF01389 OmpA-like transmembrane domain AYR70_11425 PF00691 OmpA family AYR70_11490 PF00005 ABC transporter AYR70_11495 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR70_11500 PF01425 Amidase AYR70_11505 PF08753 NikR C terminal nickel binding domain AYR70_11505 PF01402 Ribbon-helix-helix protein, copG family AYR70_11520 PF01638 HxlR-like helix-turn-helix AYR70_11525 PF02525 Flavodoxin-like fold AYR70_11530 PF02785 Biotin carboxylase C-terminal domain AYR70_11530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR70_11530 PF00289 Biotin carboxylase, N-terminal domain AYR70_11545 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_11545 PF00107 Zinc-binding dehydrogenase AYR70_11545 PF13823 Alcohol dehydrogenase GroES-associated AYR70_11555 PF00440 Bacterial regulatory proteins, tetR family AYR70_11580 PF00654 Voltage gated chloride channel AYR70_11585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR70_11585 PF00364 Biotin-requiring enzyme AYR70_11585 PF00289 Biotin carboxylase, N-terminal domain AYR70_11585 PF02785 Biotin carboxylase C-terminal domain AYR70_11595 PF07286 Protein of unknown function (DUF1445) AYR70_11600 PF03746 LamB/YcsF family AYR70_11605 PF01566 Natural resistance-associated macrophage protein AYR70_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_11610 PF03466 LysR substrate binding domain AYR70_11625 PF14220 Domain of unknown function (DUF4329) AYR70_11625 PF03527 RHS protein AYR70_11625 PF05593 RHS Repeat AYR70_11630 PF04717 Type VI secretion system, phage-baseplate injector AYR70_11630 PF16671 Actin cross-linking domain AYR70_11640 PF13419 Haloacid dehalogenase-like hydrolase AYR70_11655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR70_11655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR70_11675 PF07690 Major Facilitator Superfamily AYR70_11685 PF03279 Bacterial lipid A biosynthesis acyltransferase AYR70_11690 PF03707 Bacterial signalling protein N terminal repeat AYR70_11690 PF00990 Diguanylate cyclase, GGDEF domain AYR70_11690 PF00563 EAL domain AYR70_11695 PF00892 EamA-like transporter family AYR70_11700 PF01037 Lrp/AsnC ligand binding domain AYR70_11705 PF05190 MutS family domain IV AYR70_11705 PF01624 MutS domain I AYR70_11705 PF05188 MutS domain II AYR70_11705 PF05192 MutS domain III AYR70_11705 PF00488 MutS domain V AYR70_11715 PF11953 Domain of unknown function (DUF3470) AYR70_11715 PF00037 4Fe-4S binding domain AYR70_11725 PF01596 O-methyltransferase AYR70_11735 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_11740 PF01205 Uncharacterized protein family UPF0029 AYR70_11750 PF03412 Peptidase C39 family AYR70_11750 PF00005 ABC transporter AYR70_11750 PF00664 ABC transporter transmembrane region AYR70_11755 PF02321 Outer membrane efflux protein AYR70_11760 PF12399 Branched-chain amino acid ATP-binding cassette transporter AYR70_11760 PF00005 ABC transporter AYR70_11765 PF03968 OstA-like protein AYR70_11780 PF00571 CBS domain AYR70_11780 PF01380 SIS domain AYR70_11785 PF09190 DALR domain AYR70_11785 PF01406 tRNA synthetases class I (C) catalytic domain AYR70_11815 PF01638 HxlR-like helix-turn-helix AYR70_11820 PF07690 Major Facilitator Superfamily AYR70_11840 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYR70_11840 PF03807 NADP oxidoreductase coenzyme F420-dependent AYR70_11850 PF00313 'Cold-shock' DNA-binding domain AYR70_11855 PF01810 LysE type translocator AYR70_11890 PF02601 Exonuclease VII, large subunit AYR70_11890 PF13742 OB-fold nucleic acid binding domain AYR70_11925 PF00376 MerR family regulatory protein AYR70_11925 PF09278 MerR, DNA binding AYR70_11930 PF00403 Heavy-metal-associated domain AYR70_11935 PF00403 Heavy-metal-associated domain AYR70_11940 PF03466 LysR substrate binding domain AYR70_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_11945 PF00355 Rieske [2Fe-2S] domain AYR70_11945 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR70_11950 PF00866 Ring hydroxylating beta subunit AYR70_11955 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_11955 PF00175 Oxidoreductase NAD-binding domain AYR70_11955 PF00970 Oxidoreductase FAD-binding domain AYR70_11960 PF00106 short chain dehydrogenase AYR70_11965 PF03594 Benzoate membrane transport protein AYR70_11970 PF07690 Major Facilitator Superfamily AYR70_11980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AYR70_11980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYR70_11985 PF00270 DEAD/DEAH box helicase AYR70_11985 PF11898 Domain of unknown function (DUF3418) AYR70_11985 PF04408 Helicase associated domain (HA2) AYR70_11985 PF00271 Helicase conserved C-terminal domain AYR70_11985 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AYR70_11990 PF00578 AhpC/TSA family AYR70_11990 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYR70_12010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_12010 PF13192 Thioredoxin domain AYR70_12020 PF02798 Glutathione S-transferase, N-terminal domain AYR70_12020 PF00043 Glutathione S-transferase, C-terminal domain AYR70_12030 PF02390 Putative methyltransferase AYR70_12035 PF00043 Glutathione S-transferase, C-terminal domain AYR70_12035 PF13417 Glutathione S-transferase, N-terminal domain AYR70_12045 PF00691 OmpA family AYR70_12045 PF13488 Glycine zipper AYR70_12050 PF01979 Amidohydrolase family AYR70_12055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYR70_12055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYR70_12065 PF02926 THUMP domain AYR70_12065 PF01170 Putative RNA methylase family UPF0020 AYR70_12065 PF10672 S-adenosylmethionine-dependent methyltransferase AYR70_12080 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_12080 PF10431 C-terminal, D2-small domain, of ClpB protein AYR70_12080 PF02861 Clp amino terminal domain, pathogenicity island component AYR70_12080 PF17871 AAA lid domain AYR70_12080 PF07724 AAA domain (Cdc48 subfamily) AYR70_12095 PF02566 OsmC-like protein AYR70_12100 PF00027 Cyclic nucleotide-binding domain AYR70_12100 PF13545 Crp-like helix-turn-helix domain AYR70_12115 PF00248 Aldo/keto reductase family AYR70_12130 PF00709 Adenylosuccinate synthetase AYR70_12135 PF13393 Histidyl-tRNA synthetase AYR70_12140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYR70_12140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR70_12145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYR70_12145 PF01411 tRNA synthetases class II (A) AYR70_12145 PF02272 DHHA1 domain AYR70_12150 PF13840 ACT domain AYR70_12150 PF00696 Amino acid kinase family AYR70_12150 PF01842 ACT domain AYR70_12155 PF02599 Global regulator protein family AYR70_12160 PF01351 Ribonuclease HII AYR70_12170 PF01292 Prokaryotic cytochrome b561 AYR70_12175 PF00962 Adenosine/AMP deaminase AYR70_12180 PF00860 Permease family AYR70_12190 PF00743 Flavin-binding monooxygenase-like AYR70_12195 PF00106 short chain dehydrogenase AYR70_12205 PF17954 Quercetinase C-terminal cupin domain AYR70_12205 PF02678 Pirin AYR70_12210 PF00440 Bacterial regulatory proteins, tetR family AYR70_12210 PF17932 Tetracyclin repressor-like, C-terminal domain AYR70_12220 PF00106 short chain dehydrogenase AYR70_12230 PF13610 DDE domain AYR70_12245 PF00563 EAL domain AYR70_12245 PF11809 Domain of unknown function (DUF3330) AYR70_12260 PF00583 Acetyltransferase (GNAT) family AYR70_12280 PF01909 Nucleotidyltransferase domain AYR70_12280 PF13427 Domain of unknown function (DUF4111) AYR70_12285 PF00893 Small Multidrug Resistance protein AYR70_12290 PF00809 Pterin binding enzyme AYR70_12310 PF01636 Phosphotransferase enzyme family AYR70_12320 PF13610 DDE domain AYR70_12325 PF00239 Resolvase, N terminal domain AYR70_12325 PF02796 Helix-turn-helix domain of resolvase AYR70_12330 PF13700 Domain of unknown function (DUF4158) AYR70_12330 PF01526 Tn3 transposase DDE domain AYR70_12335 PF13610 DDE domain AYR70_12345 PF00239 Resolvase, N terminal domain AYR70_12345 PF02796 Helix-turn-helix domain of resolvase AYR70_12350 PF13610 DDE domain AYR70_12355 PF00324 Amino acid permease AYR70_12360 PF04958 Arginine N-succinyltransferase beta subunit AYR70_12365 PF00202 Aminotransferase class-III AYR70_12375 PF00171 Aldehyde dehydrogenase family AYR70_12385 PF00392 Bacterial regulatory proteins, gntR family AYR70_12385 PF07729 FCD domain AYR70_12395 PF00324 Amino acid permease AYR70_12400 PF01266 FAD dependent oxidoreductase AYR70_12405 PF00324 Amino acid permease AYR70_12450 PF05593 RHS Repeat AYR70_12450 PF03527 RHS protein AYR70_12455 PF04717 Type VI secretion system, phage-baseplate injector AYR70_12455 PF16671 Actin cross-linking domain AYR70_12470 PF03180 NLPA lipoprotein AYR70_12475 PF05987 Bacterial protein of unknown function (DUF898) AYR70_12490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR70_12490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_12495 PF00764 Arginosuccinate synthase AYR70_12500 PF01590 GAF domain AYR70_12500 PF00563 EAL domain AYR70_12500 PF00360 Phytochrome region AYR70_12500 PF00990 Diguanylate cyclase, GGDEF domain AYR70_12505 PF01979 Amidohydrolase family AYR70_12510 PF00929 Exonuclease AYR70_12520 PF00593 TonB dependent receptor AYR70_12520 PF07715 TonB-dependent Receptor Plug Domain AYR70_12525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR70_12525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_12530 PF00005 ABC transporter AYR70_12530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYR70_12535 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_12535 PF12911 N-terminal TM domain of oligopeptide transport permease C AYR70_12540 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_12545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYR70_12550 PF01476 LysM domain AYR70_12550 PF01464 Transglycosylase SLT domain AYR70_12550 PF01464 Transglycosylase SLT domain AYR70_12550 PF01476 LysM domain AYR70_12555 PF00929 Exonuclease AYR70_12565 PF00293 NUDIX domain AYR70_12565 PF09297 NADH pyrophosphatase zinc ribbon domain AYR70_12575 PF04972 BON domain AYR70_12580 PF02021 Uncharacterised protein family UPF0102 AYR70_12585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYR70_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_12595 PF03466 LysR substrate binding domain AYR70_12600 PF01810 LysE type translocator AYR70_12610 PF13411 MerR HTH family regulatory protein AYR70_12620 PF01494 FAD binding domain AYR70_12625 PF01494 FAD binding domain AYR70_12630 PF00557 Metallopeptidase family M24 AYR70_12630 PF05195 Aminopeptidase P, N-terminal domain AYR70_12665 PF08019 Phosphoethanolamine transferase EptA/EptB AYR70_12665 PF00884 Sulfatase AYR70_12710 PF01476 LysM domain AYR70_12710 PF01551 Peptidase family M23 AYR70_12710 PF08525 Opacity-associated protein A N-terminal motif AYR70_13025 PF01812 5-formyltetrahydrofolate cyclo-ligase family AYR70_13035 PF05662 Coiled stalk of trimeric autotransporter adhesin AYR70_13035 PF05658 Head domain of trimeric autotransporter adhesin AYR70_13035 PF03895 YadA-like membrane anchor domain AYR70_13035 PF13018 Extended Signal Peptide of Type V secretion system AYR70_13040 PF02190 ATP-dependent protease La (LON) substrate-binding domain AYR70_13040 PF00004 ATPase family associated with various cellular activities (AAA) AYR70_13040 PF05362 Lon protease (S16) C-terminal proteolytic domain AYR70_13045 PF02590 Predicted SPOUT methyltransferase AYR70_13050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AYR70_13060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYR70_13060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR70_13065 PF04060 Putative Fe-S cluster AYR70_13070 PF00730 HhH-GPD superfamily base excision DNA repair protein AYR70_13070 PF00633 Helix-hairpin-helix motif AYR70_13070 PF10576 Iron-sulfur binding domain of endonuclease III AYR70_13075 PF05191 Adenylate kinase, active site lid AYR70_13090 PF00905 Penicillin binding protein transpeptidase domain AYR70_13090 PF03717 Penicillin-binding Protein dimerisation domain AYR70_13105 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYR70_13110 PF01730 UreF AYR70_13115 PF02814 UreE urease accessory protein, N-terminal domain AYR70_13115 PF05194 UreE urease accessory protein, C-terminal domain AYR70_13125 PF00699 Urease beta subunit AYR70_13130 PF00547 Urease, gamma subunit AYR70_13135 PF01774 UreD urease accessory protein AYR70_13150 PF00463 Isocitrate lyase family AYR70_13155 PF03466 LysR substrate binding domain AYR70_13155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_13160 PF03471 Transporter associated domain AYR70_13160 PF00571 CBS domain AYR70_13160 PF01595 Cyclin M transmembrane N-terminal domain AYR70_13170 PF03600 Citrate transporter AYR70_13185 PF00009 Elongation factor Tu GTP binding domain AYR70_13190 PF01507 Phosphoadenosine phosphosulfate reductase family AYR70_13195 PF14052 Capsule assembly protein Wzi AYR70_13200 PF00152 tRNA synthetases class II (D, K and N) AYR70_13200 PF01336 OB-fold nucleic acid binding domain AYR70_13215 PF00301 Rubredoxin AYR70_13220 PF18113 Rubredoxin binding C-terminal domain AYR70_13220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_13225 PF00561 alpha/beta hydrolase fold AYR70_13230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_13230 PF03466 LysR substrate binding domain AYR70_13240 PF13090 Polyphosphate kinase C-terminal domain 2 AYR70_13240 PF13089 Polyphosphate kinase N-terminal domain AYR70_13240 PF17941 Polyphosphate kinase C-terminal domain 1 AYR70_13240 PF02503 Polyphosphate kinase middle domain AYR70_13245 PF00912 Transglycosylase AYR70_13250 PF01694 Rhomboid family AYR70_13260 PF00005 ABC transporter AYR70_13265 PF13472 GDSL-like Lipase/Acylhydrolase family AYR70_13270 PF00484 Carbonic anhydrase AYR70_13275 PF00561 alpha/beta hydrolase fold AYR70_13285 PF00593 TonB dependent receptor AYR70_13285 PF07715 TonB-dependent Receptor Plug Domain AYR70_13290 PF01106 NifU-like domain AYR70_13290 PF01521 Iron-sulphur cluster biosynthesis AYR70_13300 PF00884 Sulfatase AYR70_13305 PF03781 Sulfatase-modifying factor enzyme 1 AYR70_13320 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_13325 PF01384 Phosphate transporter family AYR70_13330 PF02310 B12 binding domain AYR70_13330 PF02574 Homocysteine S-methyltransferase AYR70_13330 PF00809 Pterin binding enzyme AYR70_13330 PF02965 Vitamin B12 dependent methionine synthase, activation domain AYR70_13330 PF02607 B12 binding domain AYR70_13335 PF02780 Transketolase, C-terminal domain AYR70_13335 PF02779 Transketolase, pyrimidine binding domain AYR70_13340 PF00456 Transketolase, thiamine diphosphate binding domain AYR70_13345 PF07690 Major Facilitator Superfamily AYR70_13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_13355 PF03466 LysR substrate binding domain AYR70_13365 PF01263 Aldose 1-epimerase AYR70_13370 PF07690 Major Facilitator Superfamily AYR70_13375 PF12833 Helix-turn-helix domain AYR70_13375 PF02311 AraC-like ligand binding domain AYR70_13380 PF04960 Glutaminase AYR70_13385 PF01327 Polypeptide deformylase AYR70_13390 PF07690 Major Facilitator Superfamily AYR70_13400 PF00205 Thiamine pyrophosphate enzyme, central domain AYR70_13400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR70_13400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR70_13405 PF00171 Aldehyde dehydrogenase family AYR70_13410 PF03447 Homoserine dehydrogenase, NAD binding domain AYR70_13410 PF01958 Domain of unknown function DUF108 AYR70_13420 PF12697 Alpha/beta hydrolase family AYR70_13430 PF07690 Major Facilitator Superfamily AYR70_13435 PF14759 Reductase C-terminal AYR70_13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_13440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR70_13450 PF00355 Rieske [2Fe-2S] domain AYR70_13460 PF00355 Rieske [2Fe-2S] domain AYR70_13465 PF09339 IclR helix-turn-helix domain AYR70_13465 PF01614 Bacterial transcriptional regulator AYR70_13480 PF00378 Enoyl-CoA hydratase/isomerase AYR70_13490 PF00535 Glycosyl transferase family 2 AYR70_13495 PF14883 Hypothetical glycosyl hydrolase family 13 AYR70_13495 PF01522 Polysaccharide deacetylase AYR70_13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR70_13505 PF07152 YaeQ protein AYR70_13510 PF00375 Sodium:dicarboxylate symporter family AYR70_13515 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYR70_13515 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYR70_13525 PF03061 Thioesterase superfamily AYR70_13535 PF02028 BCCT, betaine/carnitine/choline family transporter AYR70_13540 PF02028 BCCT, betaine/carnitine/choline family transporter AYR70_13545 PF13977 BetI-type transcriptional repressor, C-terminal AYR70_13545 PF00440 Bacterial regulatory proteins, tetR family AYR70_13550 PF00171 Aldehyde dehydrogenase family AYR70_13555 PF05199 GMC oxidoreductase AYR70_13555 PF00732 GMC oxidoreductase AYR70_13560 PF06039 Malate:quinone oxidoreductase (Mqo) AYR70_13570 PF02574 Homocysteine S-methyltransferase AYR70_13575 PF13520 Amino acid permease AYR70_13600 PF00701 Dihydrodipicolinate synthetase family AYR70_13605 PF00083 Sugar (and other) transporter AYR70_13680 PF10544 T5orf172 domain AYR70_13685 PF13614 AAA domain AYR70_13705 PF00905 Penicillin binding protein transpeptidase domain AYR70_13730 PF10544 T5orf172 domain AYR70_13735 PF13614 AAA domain AYR70_13755 PF00905 Penicillin binding protein transpeptidase domain AYR70_13835 PF02768 DNA polymerase III beta subunit, C-terminal domain AYR70_13835 PF02767 DNA polymerase III beta subunit, central domain AYR70_13835 PF00712 DNA polymerase III beta subunit, N-terminal domain AYR70_13875 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AYR70_14060 PF00872 Transposase, Mutator family AYR70_14095 PF01695 IstB-like ATP binding protein AYR70_14105 PF01555 DNA methylase AYR70_14130 PF01555 DNA methylase AYR70_14135 PF00145 C-5 cytosine-specific DNA methylase AYR70_14205 PF00929 Exonuclease AYR70_14235 PF07690 Major Facilitator Superfamily AYR70_14240 PF13533 Biotin-lipoyl like AYR70_14245 PF03061 Thioesterase superfamily AYR70_14250 PF00490 Delta-aminolevulinic acid dehydratase AYR70_14255 PF01266 FAD dependent oxidoreductase AYR70_14260 PF08338 Domain of unknown function (DUF1731) AYR70_14260 PF01370 NAD dependent epimerase/dehydratase family AYR70_14280 PF12320 Type 5 capsule protein repressor C-terminal domain AYR70_14280 PF00149 Calcineurin-like phosphoesterase AYR70_14290 PF01168 Alanine racemase, N-terminal domain AYR70_14295 PF00437 Type II/IV secretion system protein AYR70_14300 PF00437 Type II/IV secretion system protein AYR70_14305 PF01475 Ferric uptake regulator family AYR70_14310 PF04355 SmpA / OmlA family AYR70_14315 PF03658 RnfH family Ubiquitin AYR70_14330 PF01814 Hemerythrin HHE cation binding domain AYR70_14335 PF13230 Glutamine amidotransferases class-II AYR70_14345 PF00696 Amino acid kinase family AYR70_14350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR70_14350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR70_14350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR70_14350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR70_14355 PF00692 dUTPase AYR70_14360 PF00580 UvrD/REP helicase N-terminal domain AYR70_14360 PF13361 UvrD-like helicase C-terminal domain AYR70_14365 PF13488 Glycine zipper AYR70_14365 PF00691 OmpA family AYR70_14370 PF01553 Acyltransferase AYR70_14380 PF03775 Septum formation inhibitor MinC, C-terminal domain AYR70_14385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AYR70_14390 PF03776 Septum formation topological specificity factor MinE AYR70_14410 PF01810 LysE type translocator AYR70_14415 PF17854 FtsK alpha domain AYR70_14415 PF01580 FtsK/SpoIIIE family AYR70_14415 PF09397 Ftsk gamma domain AYR70_14415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AYR70_14420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR70_14425 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AYR70_14430 PF04377 Arginine-tRNA-protein transferase, C terminus AYR70_14430 PF04376 Arginine-tRNA-protein transferase, N terminus AYR70_14435 PF00583 Acetyltransferase (GNAT) family AYR70_14450 PF03143 Elongation factor Tu C-terminal domain AYR70_14450 PF03144 Elongation factor Tu domain 2 AYR70_14450 PF00009 Elongation factor Tu GTP binding domain AYR70_14455 PF03764 Elongation factor G, domain IV AYR70_14455 PF14492 Elongation Factor G, domain II AYR70_14455 PF00679 Elongation factor G C-terminus AYR70_14455 PF03144 Elongation factor Tu domain 2 AYR70_14455 PF00009 Elongation factor Tu GTP binding domain AYR70_14460 PF00177 Ribosomal protein S7p/S5e AYR70_14465 PF00164 Ribosomal protein S12/S23 AYR70_14475 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR70_14475 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR70_14485 PF02678 Pirin AYR70_14485 PF05726 Pirin C-terminal cupin domain AYR70_14495 PF00795 Carbon-nitrogen hydrolase AYR70_14495 PF02540 NAD synthase AYR70_14510 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR70_14510 PF00175 Oxidoreductase NAD-binding domain AYR70_14510 PF00970 Oxidoreductase FAD-binding domain AYR70_14515 PF00171 Aldehyde dehydrogenase family AYR70_14520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR70_14520 PF00355 Rieske [2Fe-2S] domain AYR70_14525 PF07859 alpha/beta hydrolase fold AYR70_14530 PF02028 BCCT, betaine/carnitine/choline family transporter AYR70_14535 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR70_14540 PF03466 LysR substrate binding domain AYR70_14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_14560 PF00037 4Fe-4S binding domain AYR70_14565 PF01467 Cytidylyltransferase-like AYR70_14570 PF01668 SmpB protein AYR70_14575 PF03358 NADPH-dependent FMN reductase AYR70_14585 PF01479 S4 domain AYR70_14585 PF00849 RNA pseudouridylate synthase AYR70_14590 PF13525 Outer membrane lipoprotein AYR70_14595 PF01807 CHC2 zinc finger AYR70_14595 PF10410 DnaB-helicase binding domain of primase AYR70_14595 PF08275 DNA primase catalytic core, N-terminal domain AYR70_14595 PF08278 DNA primase DnaG DnaB-binding AYR70_14600 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AYR70_14600 PF01488 Shikimate / quinate 5-dehydrogenase AYR70_14600 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AYR70_14610 PF03550 Outer membrane lipoprotein LolB AYR70_14615 PF00288 GHMP kinases N terminal domain AYR70_14615 PF08544 GHMP kinases C terminal AYR70_14640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYR70_14640 PF14572 Phosphoribosyl synthetase-associated domain AYR70_14645 PF01386 Ribosomal L25p family AYR70_14650 PF01195 Peptidyl-tRNA hydrolase AYR70_14655 PF02261 Aspartate decarboxylase AYR70_14670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYR70_14680 PF08543 Phosphomethylpyrimidine kinase AYR70_14680 PF02581 Thiamine monophosphate synthase AYR70_14680 PF03070 TENA/THI-4/PQQC family AYR70_14685 PF04972 BON domain AYR70_14685 PF01476 LysM domain AYR70_14690 PF00550 Phosphopantetheine attachment site AYR70_14700 PF00698 Acyl transferase domain AYR70_14705 PF01783 Ribosomal L32p protein family AYR70_14710 PF02620 Large ribosomal RNA subunit accumulation protein YceD AYR70_14715 PF04315 Elongation factor P hydroxylase AYR70_14720 PF01300 Telomere recombination AYR70_14725 PF02616 Segregation and condensation protein ScpA AYR70_14730 PF04079 Segregation and condensation complex subunit ScpB AYR70_14735 PF01479 S4 domain AYR70_14735 PF00849 RNA pseudouridylate synthase AYR70_14750 PF00155 Aminotransferase class I and II AYR70_14755 PF00202 Aminotransferase class-III AYR70_14755 PF06968 Biotin and Thiamin Synthesis associated domain AYR70_14755 PF04055 Radical SAM superfamily AYR70_14760 PF08241 Methyltransferase domain AYR70_14760 PF12697 Alpha/beta hydrolase family AYR70_14765 PF02358 Trehalose-phosphatase AYR70_14770 PF00982 Glycosyltransferase family 20 AYR70_14775 PF07690 Major Facilitator Superfamily AYR70_14780 PF00210 Ferritin-like domain AYR70_14785 PF12826 Helix-hairpin-helix motif AYR70_14785 PF00533 BRCA1 C Terminus (BRCT) domain AYR70_14785 PF01653 NAD-dependent DNA ligase adenylation domain AYR70_14785 PF03120 NAD-dependent DNA ligase OB-fold domain AYR70_14785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AYR70_14795 PF02463 RecF/RecN/SMC N terminal domain AYR70_14795 PF06470 SMC proteins Flexible Hinge Domain AYR70_14805 PF01925 Sulfite exporter TauE/SafE AYR70_14815 PF03309 Type III pantothenate kinase AYR70_14820 PF02978 Signal peptide binding domain AYR70_14820 PF00448 SRP54-type protein, GTPase domain AYR70_14820 PF02881 SRP54-type protein, helical bundle domain AYR70_14830 PF01207 Dihydrouridine synthase (Dus) AYR70_14860 PF00692 dUTPase AYR70_14875 PF01048 Phosphorylase superfamily AYR70_14880 PF10609 NUBPL iron-transfer P-loop NTPase AYR70_14890 PF09334 tRNA synthetases class I (M) AYR70_14890 PF01588 Putative tRNA binding domain AYR70_14915 PF13533 Biotin-lipoyl like AYR70_14920 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_14935 PF05552 Conserved TM helix AYR70_14950 PF00175 Oxidoreductase NAD-binding domain AYR70_14950 PF00970 Oxidoreductase FAD-binding domain AYR70_14955 PF03466 LysR substrate binding domain AYR70_14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_14960 PF00313 'Cold-shock' DNA-binding domain AYR70_14970 PF00361 Proton-conducting membrane transporter AYR70_14975 PF00361 Proton-conducting membrane transporter AYR70_14980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYR70_14980 PF00361 Proton-conducting membrane transporter AYR70_14985 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYR70_14990 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AYR70_14995 PF12838 4Fe-4S dicluster domain AYR70_15000 PF00146 NADH dehydrogenase AYR70_15005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYR70_15005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYR70_15005 PF00384 Molybdopterin oxidoreductase AYR70_15010 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AYR70_15010 PF10531 SLBB domain AYR70_15010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AYR70_15020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AYR70_15020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AYR70_15025 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AYR70_15030 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AYR70_15035 PF17151 Periplasmic sensor domain AYR70_15035 PF00990 Diguanylate cyclase, GGDEF domain AYR70_15045 PF00512 His Kinase A (phospho-acceptor) domain AYR70_15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_15045 PF00672 HAMP domain AYR70_15050 PF00486 Transcriptional regulatory protein, C terminal AYR70_15050 PF00072 Response regulator receiver domain AYR70_15060 PF03477 ATP cone domain AYR70_15060 PF02867 Ribonucleotide reductase, barrel domain AYR70_15060 PF00317 Ribonucleotide reductase, all-alpha domain AYR70_15070 PF00268 Ribonucleotide reductase, small chain AYR70_15080 PF13755 Sensor N-terminal transmembrane domain AYR70_15080 PF13756 Stimulus-sensing domain AYR70_15080 PF00672 HAMP domain AYR70_15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_15080 PF00512 His Kinase A (phospho-acceptor) domain AYR70_15150 PF01011 PQQ enzyme repeat AYR70_15150 PF13360 PQQ-like domain AYR70_15170 PF02567 Phenazine biosynthesis-like protein AYR70_15195 PF01613 Flavin reductase like domain AYR70_15200 PF08267 Cobalamin-independent synthase, N-terminal domain AYR70_15200 PF01717 Cobalamin-independent synthase, Catalytic domain AYR70_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_15210 PF03466 LysR substrate binding domain AYR70_15215 PF01810 LysE type translocator AYR70_15225 PF12833 Helix-turn-helix domain AYR70_15225 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYR70_15230 PF01546 Peptidase family M20/M25/M40 AYR70_15230 PF07687 Peptidase dimerisation domain AYR70_15240 PF03466 LysR substrate binding domain AYR70_15240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_15245 PF07690 Major Facilitator Superfamily AYR70_15255 PF03466 LysR substrate binding domain AYR70_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_15260 PF14537 Cytochrome c3 AYR70_15260 PF00890 FAD binding domain AYR70_15270 PF02515 CoA-transferase family III AYR70_15275 PF07690 Major Facilitator Superfamily AYR70_15280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_15280 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_15280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_15285 PF03466 LysR substrate binding domain AYR70_15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_15290 PF00107 Zinc-binding dehydrogenase AYR70_15290 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_15295 PF00962 Adenosine/AMP deaminase AYR70_15320 PF02445 Quinolinate synthetase A protein AYR70_15325 PF01960 ArgJ family AYR70_15330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR70_15330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYR70_15335 PF00893 Small Multidrug Resistance protein AYR70_15345 PF05275 Copper resistance protein B precursor (CopB) AYR70_15350 PF00394 Multicopper oxidase AYR70_15350 PF07732 Multicopper oxidase AYR70_15350 PF07731 Multicopper oxidase AYR70_15365 PF00834 Ribulose-phosphate 3 epimerase family AYR70_15375 PF00756 Putative esterase AYR70_15385 PF04445 Putative SAM-dependent methyltransferase AYR70_15390 PF00814 Glycoprotease family AYR70_15395 PF00132 Bacterial transferase hexapeptide (six repeats) AYR70_15400 PF00293 NUDIX domain AYR70_15445 PF00425 chorismate binding enzyme AYR70_15445 PF04715 Anthranilate synthase component I, N terminal region AYR70_15450 PF00155 Aminotransferase class I and II AYR70_15455 PF00815 Histidinol dehydrogenase AYR70_15460 PF01634 ATP phosphoribosyltransferase AYR70_15465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR70_15470 PF01722 BolA-like protein AYR70_15475 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AYR70_15480 PF04552 Sigma-54, DNA binding domain AYR70_15480 PF00309 Sigma-54 factor, Activator interacting domain (AID) AYR70_15480 PF04963 Sigma-54 factor, core binding domain AYR70_15525 PF00795 Carbon-nitrogen hydrolase AYR70_15535 PF01047 MarR family AYR70_15540 PF02566 OsmC-like protein AYR70_15545 PF00437 Type II/IV secretion system protein AYR70_15565 PF00476 DNA polymerase family A AYR70_15565 PF01612 3'-5' exonuclease AYR70_15565 PF01367 5'-3' exonuclease, C-terminal SAM fold AYR70_15565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYR70_15570 PF02325 YGGT family AYR70_15575 PF03807 NADP oxidoreductase coenzyme F420-dependent AYR70_15575 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYR70_15580 PF01171 PP-loop family AYR70_15580 PF11734 TilS substrate C-terminal domain AYR70_15580 PF09179 TilS substrate binding domain AYR70_15585 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AYR70_15590 PF02541 Ppx/GppA phosphatase family AYR70_15595 PF00085 Thioredoxin AYR70_15600 PF07498 Rho termination factor, N-terminal domain AYR70_15600 PF07497 Rho termination factor, RNA-binding domain AYR70_15600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR70_15610 PF00216 Bacterial DNA-binding protein AYR70_15615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AYR70_15615 PF01588 Putative tRNA binding domain AYR70_15615 PF03147 Ferredoxin-fold anticodon binding domain AYR70_15615 PF03483 B3/4 domain AYR70_15615 PF03484 tRNA synthetase B5 domain AYR70_15620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYR70_15620 PF01409 tRNA synthetases class II core domain (F) AYR70_15640 PF00453 Ribosomal protein L20 AYR70_15645 PF01632 Ribosomal protein L35 AYR70_15650 PF07690 Major Facilitator Superfamily AYR70_15655 PF09335 SNARE associated Golgi protein AYR70_15660 PF02798 Glutathione S-transferase, N-terminal domain AYR70_15660 PF00043 Glutathione S-transferase, C-terminal domain AYR70_15665 PF05198 Translation initiation factor IF-3, N-terminal domain AYR70_15665 PF00707 Translation initiation factor IF-3, C-terminal domain AYR70_15670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYR70_15670 PF02824 TGS domain AYR70_15670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR70_15670 PF03129 Anticodon binding domain AYR70_15675 PF00501 AMP-binding enzyme AYR70_15675 PF13193 AMP-binding enzyme C-terminal domain AYR70_15680 PF04751 Protein of unknown function (DUF615) AYR70_15685 PF00381 PTS HPr component phosphorylation site AYR70_15690 PF03668 P-loop ATPase protein family AYR70_15695 PF02569 Pantoate-beta-alanine ligase AYR70_15700 PF02548 Ketopantoate hydroxymethyltransferase AYR70_15705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYR70_15710 PF01743 Poly A polymerase head domain AYR70_15710 PF12627 Probable RNA and SrmB- binding site of polymerase A AYR70_15710 PF12626 Polymerase A arginine-rich C-terminus AYR70_15720 PF03819 MazG nucleotide pyrophosphohydrolase domain AYR70_15730 PF02824 TGS domain AYR70_15730 PF13291 ACT domain AYR70_15730 PF04607 Region found in RelA / SpoT proteins AYR70_15735 PF05958 tRNA (Uracil-5-)-methyltransferase AYR70_15745 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_15750 PF00072 Response regulator receiver domain AYR70_15750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AYR70_15750 PF00672 HAMP domain AYR70_15750 PF00512 His Kinase A (phospho-acceptor) domain AYR70_15750 PF01627 Hpt domain AYR70_15750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_15755 PF00378 Enoyl-CoA hydratase/isomerase AYR70_15760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR70_15760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR70_15765 PF01261 Xylose isomerase-like TIM barrel AYR70_15775 PF00106 short chain dehydrogenase AYR70_15780 PF02233 NAD(P) transhydrogenase beta subunit AYR70_15785 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AYR70_15790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AYR70_15790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AYR70_15795 PF00892 EamA-like transporter family AYR70_15805 PF07690 Major Facilitator Superfamily AYR70_15810 PF01207 Dihydrouridine synthase (Dus) AYR70_15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_15820 PF03466 LysR substrate binding domain AYR70_15825 PF00899 ThiF family AYR70_15835 PF00694 Aconitase C-terminal domain AYR70_15835 PF00330 Aconitase family (aconitate hydratase) AYR70_15840 PF01026 TatD related DNase AYR70_15855 PF00009 Elongation factor Tu GTP binding domain AYR70_15855 PF03144 Elongation factor Tu domain 2 AYR70_15855 PF16658 Class II release factor RF3, C-terminal domain AYR70_15875 PF03707 Bacterial signalling protein N terminal repeat AYR70_15875 PF00990 Diguanylate cyclase, GGDEF domain AYR70_15875 PF00563 EAL domain AYR70_15880 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AYR70_15880 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AYR70_15885 PF10369 Small subunit of acetolactate synthase AYR70_15890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR70_15890 PF00205 Thiamine pyrophosphate enzyme, central domain AYR70_15890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR70_15900 PF08264 Anticodon-binding domain of tRNA AYR70_15900 PF00133 tRNA synthetases class I (I, L, M and V) AYR70_15900 PF09334 tRNA synthetases class I (M) AYR70_15900 PF13603 Leucyl-tRNA synthetase, Domain 2 AYR70_15915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYR70_15920 PF12704 MacB-like periplasmic core domain AYR70_15920 PF02687 FtsX-like permease family AYR70_15920 PF00005 ABC transporter AYR70_15925 PF02321 Outer membrane efflux protein AYR70_15940 PF00929 Exonuclease AYR70_15945 PF03193 RsgA GTPase AYR70_15955 PF00462 Glutaredoxin AYR70_15960 PF02556 Preprotein translocase subunit SecB AYR70_15975 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR70_15975 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR70_15990 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR70_15990 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR70_16000 PF04820 Tryptophan halogenase AYR70_16020 PF00221 Aromatic amino acid lyase AYR70_16035 PF00501 AMP-binding enzyme AYR70_16035 PF13193 AMP-binding enzyme C-terminal domain AYR70_16045 PF00550 Phosphopantetheine attachment site AYR70_16050 PF00550 Phosphopantetheine attachment site AYR70_16065 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYR70_16065 PF01926 50S ribosome-binding GTPase AYR70_16070 PF13360 PQQ-like domain AYR70_16080 PF13393 Histidyl-tRNA synthetase AYR70_16080 PF03129 Anticodon binding domain AYR70_16085 PF04551 GcpE protein AYR70_16090 PF13464 Domain of unknown function (DUF4115) AYR70_16100 PF04055 Radical SAM superfamily AYR70_16105 PF00334 Nucleoside diphosphate kinase AYR70_16110 PF04384 Iron-sulphur cluster assembly AYR70_16115 PF01569 PAP2 superfamily AYR70_16120 PF13439 Glycosyltransferase Family 4 AYR70_16120 PF00534 Glycosyl transferases group 1 AYR70_16125 PF11818 C-terminal domain of tail specific protease (DUF3340) AYR70_16125 PF00595 PDZ domain AYR70_16125 PF03572 Peptidase family S41 AYR70_16125 PF17804 Tail specific protease N-terminal domain AYR70_16130 PF00933 Glycosyl hydrolase family 3 N terminal domain AYR70_16140 PF00561 alpha/beta hydrolase fold AYR70_16145 PF00171 Aldehyde dehydrogenase family AYR70_16150 PF00171 Aldehyde dehydrogenase family AYR70_16155 PF01202 Shikimate kinase AYR70_16160 PF02447 GntP family permease AYR70_16165 PF01081 KDPG and KHG aldolase AYR70_16170 PF00920 Dehydratase family AYR70_16175 PF00871 Acetokinase family AYR70_16180 PF07085 DRTGG domain AYR70_16180 PF01515 Phosphate acetyl/butaryl transferase AYR70_16185 PF05683 Fumarase C-terminus AYR70_16185 PF05681 Fumarate hydratase (Fumerase) AYR70_16200 PF07724 AAA domain (Cdc48 subfamily) AYR70_16200 PF10431 C-terminal, D2-small domain, of ClpB protein AYR70_16200 PF06689 ClpX C4-type zinc finger AYR70_16205 PF00574 Clp protease AYR70_16210 PF05698 Bacterial trigger factor protein (TF) C-terminus AYR70_16210 PF05697 Bacterial trigger factor protein (TF) AYR70_16210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR70_16215 PF00593 TonB dependent receptor AYR70_16215 PF07715 TonB-dependent Receptor Plug Domain AYR70_16220 PF13640 2OG-Fe(II) oxygenase superfamily AYR70_16220 PF18331 PKHD-type hydroxylase C-terminal domain AYR70_16225 PF08502 LeuA allosteric (dimerisation) domain AYR70_16225 PF00682 HMGL-like AYR70_16230 PF00561 alpha/beta hydrolase fold AYR70_16235 PF07021 Methionine biosynthesis protein MetW AYR70_16235 PF00561 alpha/beta hydrolase fold AYR70_16245 PF01725 Ham1 family AYR70_16255 PF02416 mttA/Hcf106 family AYR70_16260 PF02416 mttA/Hcf106 family AYR70_16265 PF00902 Sec-independent protein translocase protein (TatC) AYR70_16285 PF01790 Prolipoprotein diacylglyceryl transferase AYR70_16300 PF00303 Thymidylate synthase AYR70_16305 PF00186 Dihydrofolate reductase AYR70_16315 PF01625 Peptide methionine sulfoxide reductase AYR70_16325 PF01618 MotA/TolQ/ExbB proton channel family AYR70_16335 PF00551 Formyl transferase AYR70_16335 PF01842 ACT domain AYR70_16345 PF00171 Aldehyde dehydrogenase family AYR70_16350 PF00830 Ribosomal L28 family AYR70_16355 PF00471 Ribosomal protein L33 AYR70_16360 PF00999 Sodium/hydrogen exchanger family AYR70_16360 PF02254 TrkA-N domain AYR70_16380 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AYR70_16385 PF00580 UvrD/REP helicase N-terminal domain AYR70_16385 PF13361 UvrD-like helicase C-terminal domain AYR70_16400 PF08272 Topoisomerase I zinc-ribbon-like AYR70_16400 PF01131 DNA topoisomerase AYR70_16400 PF01396 Topoisomerase DNA binding C4 zinc finger AYR70_16400 PF01751 Toprim domain AYR70_16410 PF01638 HxlR-like helix-turn-helix AYR70_16415 PF00107 Zinc-binding dehydrogenase AYR70_16415 PF08240 Alcohol dehydrogenase GroES-like domain AYR70_16430 PF01810 LysE type translocator AYR70_16435 PF03279 Bacterial lipid A biosynthesis acyltransferase AYR70_16445 PF00375 Sodium:dicarboxylate symporter family AYR70_16455 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYR70_16455 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR70_16475 PF01416 tRNA pseudouridine synthase AYR70_16485 PF01176 Translation initiation factor 1A / IF-1 AYR70_16500 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR70_16510 PF00694 Aconitase C-terminal domain AYR70_16515 PF00330 Aconitase family (aconitate hydratase) AYR70_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_16525 PF03466 LysR substrate binding domain AYR70_16545 PF00293 NUDIX domain AYR70_16550 PF02896 PEP-utilising enzyme, TIM barrel domain AYR70_16550 PF01590 GAF domain AYR70_16550 PF05524 PEP-utilising enzyme, N-terminal AYR70_16550 PF00391 PEP-utilising enzyme, mobile domain AYR70_16555 PF00141 Peroxidase AYR70_16560 PF12706 Beta-lactamase superfamily domain AYR70_16565 PF03466 LysR substrate binding domain AYR70_16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_16575 PF02798 Glutathione S-transferase, N-terminal domain AYR70_16580 PF08279 HTH domain AYR70_16580 PF13280 WYL domain AYR70_16585 PF13419 Haloacid dehalogenase-like hydrolase AYR70_16590 PF01479 S4 domain AYR70_16590 PF00849 RNA pseudouridylate synthase AYR70_16595 PF10150 Ribonuclease E/G family AYR70_16595 PF00575 S1 RNA binding domain AYR70_16595 PF12111 Polyribonucleotide phosphorylase C terminal AYR70_16600 PF13193 AMP-binding enzyme C-terminal domain AYR70_16600 PF00501 AMP-binding enzyme AYR70_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_16615 PF03466 LysR substrate binding domain AYR70_16620 PF00106 short chain dehydrogenase AYR70_16625 PF04055 Radical SAM superfamily AYR70_16625 PF06969 HemN C-terminal domain AYR70_16635 PF01554 MatE AYR70_16640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_16640 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_16640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR70_16645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_16645 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR70_16650 PF03109 ABC1 family AYR70_16655 PF01197 Ribosomal protein L31 AYR70_16665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AYR70_16685 PF03884 DNA gyrase inhibitor YacG AYR70_16690 PF00753 Metallo-beta-lactamase superfamily AYR70_16695 PF00762 Ferrochelatase AYR70_16705 PF01177 Asp/Glu/Hydantoin racemase AYR70_16720 PF01206 Sulfurtransferase TusA AYR70_16725 PF00571 CBS domain AYR70_16725 PF03471 Transporter associated domain AYR70_16730 PF00795 Carbon-nitrogen hydrolase AYR70_16735 PF01588 Putative tRNA binding domain AYR70_16745 PF08334 Type II secretion system (T2SS), protein G AYR70_16745 PF07963 Prokaryotic N-terminal methylation motif AYR70_16750 PF00482 Type II secretion system (T2SS), protein F AYR70_16755 PF00270 DEAD/DEAH box helicase AYR70_16755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AYR70_16755 PF17764 3′ DNA-binding domain (3′BD) AYR70_16755 PF18074 Primosomal protein N C-terminal domain AYR70_16755 PF00271 Helicase conserved C-terminal domain AYR70_16760 PF00999 Sodium/hydrogen exchanger family AYR70_16760 PF02254 TrkA-N domain AYR70_16765 PF01430 Hsp33 protein AYR70_16775 PF01556 DnaJ C terminal domain AYR70_16775 PF00226 DnaJ domain AYR70_16785 PF01544 CorA-like Mg2+ transporter protein AYR70_16790 PF01138 3' exoribonuclease family, domain 1 AYR70_16790 PF00575 S1 RNA binding domain AYR70_16790 PF00013 KH domain AYR70_16790 PF03725 3' exoribonuclease family, domain 2 AYR70_16790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AYR70_16795 PF00312 Ribosomal protein S15 AYR70_16805 PF13538 UvrD-like helicase C-terminal domain AYR70_16810 PF12705 PD-(D/E)XK nuclease superfamily AYR70_16810 PF00580 UvrD/REP helicase N-terminal domain AYR70_16810 PF13361 UvrD-like helicase C-terminal domain AYR70_16815 PF17946 RecC C-terminal domain AYR70_16825 PF03976 Polyphosphate kinase 2 (PPK2) AYR70_16835 PF01209 ubiE/COQ5 methyltransferase family AYR70_16845 PF03109 ABC1 family AYR70_16850 PF01494 FAD binding domain AYR70_16855 PF01502 Phosphoribosyl-AMP cyclohydrolase AYR70_16870 PF00361 Proton-conducting membrane transporter AYR70_16870 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AYR70_16870 PF13244 Domain of unknown function (DUF4040) AYR70_16870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYR70_16875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYR70_16880 PF00361 Proton-conducting membrane transporter AYR70_16890 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AYR70_16900 PF02033 Ribosome-binding factor A AYR70_16905 PF08364 Bacterial translation initiation factor IF-2 associated region AYR70_16905 PF11987 Translation-initiation factor 2 AYR70_16905 PF00009 Elongation factor Tu GTP binding domain AYR70_16905 PF04760 Translation initiation factor IF-2, N-terminal region AYR70_16910 PF08529 NusA N-terminal domain AYR70_16910 PF00575 S1 RNA binding domain AYR70_16910 PF13184 NusA-like KH domain AYR70_16915 PF02576 RimP N-terminal domain AYR70_16915 PF17384 RimP C-terminal SH3 domain AYR70_16935 PF03840 Preprotein translocase SecG subunit AYR70_16940 PF00121 Triosephosphate isomerase AYR70_16945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AYR70_16945 PF00437 Type II/IV secretion system protein AYR70_16950 PF00482 Type II secretion system (T2SS), protein F AYR70_16955 PF06750 Bacterial Peptidase A24 N-terminal domain AYR70_16955 PF01478 Type IV leader peptidase family AYR70_16960 PF01121 Dephospho-CoA kinase AYR70_16970 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYR70_16970 PF00588 SpoU rRNA Methylase family AYR70_16975 PF06865 Pyrimidine/purine nucleoside phosphorylase AYR70_16985 PF02463 RecF/RecN/SMC N terminal domain AYR70_16990 PF02622 Uncharacterized ACR, COG1678 AYR70_16995 PF03652 Holliday junction resolvase AYR70_17000 PF13533 Biotin-lipoyl like AYR70_17025 PF12833 Helix-turn-helix domain AYR70_17025 PF02805 Metal binding domain of Ada AYR70_17025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYR70_17025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR70_17030 PF01066 CDP-alcohol phosphatidyltransferase AYR70_17040 PF08459 UvrC Helix-hairpin-helix N-terminal AYR70_17040 PF01541 GIY-YIG catalytic domain AYR70_17040 PF02151 UvrB/uvrC motif AYR70_17060 PF00378 Enoyl-CoA hydratase/isomerase AYR70_17060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR70_17060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR70_17065 PF02803 Thiolase, C-terminal domain AYR70_17065 PF00108 Thiolase, N-terminal domain AYR70_17085 PF00376 MerR family regulatory protein AYR70_17085 PF09278 MerR, DNA binding AYR70_17095 PF01323 DSBA-like thioredoxin domain AYR70_17110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_17110 PF00183 Hsp90 protein AYR70_17125 PF13726 Na+-H+ antiporter family AYR70_17125 PF03553 Na+/H+ antiporter family AYR70_17130 PF00561 alpha/beta hydrolase fold AYR70_17150 PF04998 RNA polymerase Rpb1, domain 5 AYR70_17150 PF05000 RNA polymerase Rpb1, domain 4 AYR70_17150 PF04983 RNA polymerase Rpb1, domain 3 AYR70_17150 PF00623 RNA polymerase Rpb1, domain 2 AYR70_17150 PF04997 RNA polymerase Rpb1, domain 1 AYR70_17155 PF04563 RNA polymerase beta subunit AYR70_17155 PF00562 RNA polymerase Rpb2, domain 6 AYR70_17155 PF10385 RNA polymerase beta subunit external 1 domain AYR70_17155 PF04565 RNA polymerase Rpb2, domain 3 AYR70_17155 PF04561 RNA polymerase Rpb2, domain 2 AYR70_17155 PF04560 RNA polymerase Rpb2, domain 7 AYR70_17160 PF00542 Ribosomal protein L7/L12 C-terminal domain AYR70_17160 PF16320 Ribosomal protein L7/L12 dimerisation domain AYR70_17165 PF00466 Ribosomal protein L10 AYR70_17170 PF00687 Ribosomal protein L1p/L10e family AYR70_17175 PF00298 Ribosomal protein L11, RNA binding domain AYR70_17175 PF03946 Ribosomal protein L11, N-terminal domain AYR70_17180 PF02357 Transcription termination factor nusG AYR70_17180 PF00467 KOW motif AYR70_17185 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AYR70_17195 PF03143 Elongation factor Tu C-terminal domain AYR70_17195 PF03144 Elongation factor Tu domain 2 AYR70_17195 PF00009 Elongation factor Tu GTP binding domain AYR70_17220 PF00425 chorismate binding enzyme AYR70_17220 PF04715 Anthranilate synthase component I, N terminal region AYR70_17225 PF13419 Haloacid dehalogenase-like hydrolase AYR70_17230 PF00498 FHA domain AYR70_17230 PF12401 Protein of unknown function (DUF2662) AYR70_17235 PF03958 Bacterial type II/III secretion system short domain AYR70_17235 PF00263 Bacterial type II and III secretion system protein AYR70_17250 PF00816 H-NS histone family AYR70_17275 PF03900 Porphobilinogen deaminase, C-terminal domain AYR70_17275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AYR70_17280 PF00072 Response regulator receiver domain AYR70_17280 PF04397 LytTr DNA-binding domain AYR70_17285 PF07694 5TMR of 5TMR-LYT AYR70_17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_17285 PF06580 Histidine kinase AYR70_17290 PF14698 Argininosuccinate lyase C-terminal AYR70_17290 PF00206 Lyase AYR70_17295 PF04362 Bacterial Fe(2+) trafficking AYR70_17300 PF01895 PhoU domain AYR70_17305 PF02321 Outer membrane efflux protein AYR70_17310 PF00892 EamA-like transporter family AYR70_17325 PF13667 ThiC-associated domain AYR70_17325 PF01964 Radical SAM ThiC family AYR70_17330 PF00293 NUDIX domain AYR70_17335 PF00149 Calcineurin-like phosphoesterase AYR70_17340 PF01258 Prokaryotic dksA/traR C4-type zinc finger AYR70_17345 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR70_17350 PF01098 Cell cycle protein AYR70_17355 PF08245 Mur ligase middle domain AYR70_17355 PF02875 Mur ligase family, glutamate ligase domain AYR70_17365 PF07664 Ferrous iron transport protein B C terminus AYR70_17365 PF07670 Nucleoside recognition AYR70_17365 PF02421 Ferrous iron transport protein B AYR70_17375 PF02899 Phage integrase, N-terminal SAM-like domain AYR70_17375 PF00589 Phage integrase family AYR70_17380 PF10411 Disulfide bond isomerase protein N-terminus AYR70_17380 PF13098 Thioredoxin-like domain AYR70_17385 PF00742 Homoserine dehydrogenase AYR70_17385 PF03447 Homoserine dehydrogenase, NAD binding domain AYR70_17385 PF01842 ACT domain AYR70_17390 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_17395 PF00768 D-alanyl-D-alanine carboxypeptidase AYR70_17400 PF00196 Bacterial regulatory proteins, luxR family AYR70_17400 PF00072 Response regulator receiver domain AYR70_17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR70_17405 PF00512 His Kinase A (phospho-acceptor) domain AYR70_17410 PF02954 Bacterial regulatory protein, Fis family AYR70_17410 PF00072 Response regulator receiver domain AYR70_17410 PF00158 Sigma-54 interaction domain AYR70_17415 PF03572 Peptidase family S41 AYR70_17415 PF00595 PDZ domain AYR70_17420 PF01676 Metalloenzyme superfamily AYR70_17420 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AYR70_17425 PF03739 Lipopolysaccharide export system permease LptF/LptG AYR70_17435 PF00883 Cytosol aminopeptidase family, catalytic domain AYR70_17435 PF02789 Cytosol aminopeptidase family, N-terminal domain AYR70_17455 PF00677 Lumazine binding domain AYR70_17465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYR70_17465 PF01872 RibD C-terminal domain AYR70_17470 PF03477 ATP cone domain AYR70_17475 PF00909 Ammonium Transporter Family AYR70_17480 PF00543 Nitrogen regulatory protein P-II AYR70_17490 PF01078 Magnesium chelatase, subunit ChlI AYR70_17490 PF13335 Magnesium chelatase, subunit ChlI C-terminal AYR70_17495 PF00392 Bacterial regulatory proteins, gntR family AYR70_17495 PF00155 Aminotransferase class I and II AYR70_17500 PF00596 Class II Aldolase and Adducin N-terminal domain AYR70_17505 PF00701 Dihydrodipicolinate synthetase family AYR70_17515 PF03573 outer membrane porin, OprD family AYR70_17520 PF00719 Inorganic pyrophosphatase AYR70_17535 PF13193 AMP-binding enzyme C-terminal domain AYR70_17535 PF00501 AMP-binding enzyme AYR70_17540 PF03989 DNA gyrase C-terminal domain, beta-propeller AYR70_17540 PF00521 DNA gyrase/topoisomerase IV, subunit A AYR70_17545 PF07690 Major Facilitator Superfamily AYR70_17550 PF03458 UPF0126 domain AYR70_17555 PF02810 SEC-C motif AYR70_17560 PF03471 Transporter associated domain AYR70_17560 PF03741 Integral membrane protein TerC family AYR70_17565 PF03641 Possible lysine decarboxylase AYR70_17570 PF07690 Major Facilitator Superfamily AYR70_17580 PF00817 impB/mucB/samB family AYR70_17580 PF11799 impB/mucB/samB family C-terminal domain AYR70_17580 PF11798 IMS family HHH motif AYR70_17595 PF08497 Radical SAM N-terminal AYR70_17595 PF11842 Domain of unknown function (DUF3362) AYR70_17595 PF04055 Radical SAM superfamily AYR70_17615 PF03358 NADPH-dependent FMN reductase AYR70_17625 PF00291 Pyridoxal-phosphate dependent enzyme AYR70_17660 PF00440 Bacterial regulatory proteins, tetR family AYR70_17685 PF01327 Polypeptide deformylase AYR70_17695 PF02481 DNA recombination-mediator protein A AYR70_17695 PF17782 DprA winged helix domain AYR70_17700 PF01300 Telomere recombination AYR70_17705 PF00892 EamA-like transporter family AYR70_17710 PF00440 Bacterial regulatory proteins, tetR family AYR70_17715 PF07690 Major Facilitator Superfamily AYR70_17725 PF00255 Glutathione peroxidase AYR70_17735 PF11008 Protein of unknown function (DUF2846) AYR70_17740 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AYR70_17745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR70_17745 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYR70_17750 PF00231 ATP synthase AYR70_17755 PF00306 ATP synthase alpha/beta chain, C terminal domain AYR70_17755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR70_17755 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYR70_17760 PF00213 ATP synthase delta (OSCP) subunit AYR70_17765 PF00430 ATP synthase B/B' CF(0) AYR70_17770 PF00137 ATP synthase subunit C AYR70_17775 PF00119 ATP synthase A chain AYR70_17795 PF00005 ABC transporter AYR70_17800 PF00950 ABC 3 transport family AYR70_17805 PF01810 LysE type translocator AYR70_17810 PF04261 Dyp-type peroxidase family AYR70_17820 PF03949 Malic enzyme, NAD binding domain AYR70_17820 PF00390 Malic enzyme, N-terminal domain AYR70_17825 PF03485 Arginyl tRNA synthetase N terminal domain AYR70_17825 PF00750 tRNA synthetases class I (R) AYR70_17825 PF05746 DALR anticodon binding domain AYR70_17845 PF02678 Pirin AYR70_17845 PF05726 Pirin C-terminal cupin domain AYR70_17855 PF03551 Transcriptional regulator PadR-like family AYR70_17860 PF13427 Domain of unknown function (DUF4111) AYR70_17860 PF01909 Nucleotidyltransferase domain AYR70_17865 PF00958 GMP synthase C terminal domain AYR70_17865 PF00117 Glutamine amidotransferase class-I AYR70_17865 PF02540 NAD synthase AYR70_17870 PF04286 Protein of unknown function (DUF445) AYR70_17880 PF09335 SNARE associated Golgi protein AYR70_17895 PF13614 AAA domain AYR70_17905 PF01722 BolA-like protein AYR70_17925 PF00378 Enoyl-CoA hydratase/isomerase AYR70_17930 PF00378 Enoyl-CoA hydratase/isomerase AYR70_17935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR70_17935 PF02770 Acyl-CoA dehydrogenase, middle domain AYR70_17935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR70_17940 PF00501 AMP-binding enzyme AYR70_17940 PF13193 AMP-binding enzyme C-terminal domain AYR70_17945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR70_17945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR70_17950 PF00171 Aldehyde dehydrogenase family AYR70_17960 PF00324 Amino acid permease AYR70_17965 PF00324 Amino acid permease AYR70_17970 PF01042 Endoribonuclease L-PSP AYR70_17975 PF01168 Alanine racemase, N-terminal domain AYR70_17975 PF00842 Alanine racemase, C-terminal domain AYR70_17980 PF01266 FAD dependent oxidoreductase AYR70_17985 PF01037 Lrp/AsnC ligand binding domain AYR70_17995 PF07715 TonB-dependent Receptor Plug Domain AYR70_17995 PF00593 TonB dependent receptor AYR70_18010 PF00849 RNA pseudouridylate synthase AYR70_18075 PF00694 Aconitase C-terminal domain AYR70_18075 PF00330 Aconitase family (aconitate hydratase) AYR70_18080 PF00285 Citrate synthase, C-terminal domain AYR70_18090 PF00392 Bacterial regulatory proteins, gntR family AYR70_18090 PF07729 FCD domain AYR70_18095 PF00155 Aminotransferase class I and II AYR70_18100 PF01565 FAD binding domain AYR70_18100 PF09330 D-lactate dehydrogenase, membrane binding AYR70_18105 PF01070 FMN-dependent dehydrogenase AYR70_18110 PF00392 Bacterial regulatory proteins, gntR family AYR70_18110 PF07729 FCD domain AYR70_18115 PF02652 L-lactate permease AYR70_18120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR70_18120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR70_18120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR70_18120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR70_18130 PF16363 GDP-mannose 4,6 dehydratase AYR70_18135 PF00342 Phosphoglucose isomerase AYR70_18140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYR70_18140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYR70_18140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYR70_18145 PF00483 Nucleotidyl transferase AYR70_18150 PF02397 Bacterial sugar transferase AYR70_18155 PF00535 Glycosyl transferase family 2 AYR70_18165 PF05159 Capsule polysaccharide biosynthesis protein AYR70_18175 PF08666 SAF domain AYR70_18175 PF03102 NeuB family AYR70_18190 PF02348 Cytidylyltransferase AYR70_18195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AYR70_18200 PF02719 Polysaccharide biosynthesis protein AYR70_18205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYR70_18205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYR70_18205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYR70_18210 PF02563 Polysaccharide biosynthesis/export protein AYR70_18210 PF10531 SLBB domain AYR70_18210 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AYR70_18215 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYR70_18220 PF13614 AAA domain AYR70_18220 PF13807 G-rich domain on putative tyrosine kinase AYR70_18220 PF02706 Chain length determinant protein AYR70_18225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AYR70_18225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR70_18230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR70_18230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AYR70_18235 PF03023 Lipid II flippase MurJ AYR70_18240 PF01510 N-acetylmuramoyl-L-alanine amidase AYR70_18245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AYR70_18245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AYR70_18255 PF04185 Phosphoesterase family AYR70_18255 PF05506 Domain of unknown function (DUF756) AYR70_18260 PF01138 3' exoribonuclease family, domain 1 AYR70_18260 PF03725 3' exoribonuclease family, domain 2 AYR70_18265 PF00487 Fatty acid desaturase AYR70_18270 PF00175 Oxidoreductase NAD-binding domain AYR70_18275 PF00440 Bacterial regulatory proteins, tetR family AYR70_18280 PF00440 Bacterial regulatory proteins, tetR family AYR70_18280 PF08360 QacR-like protein, C-terminal region AYR70_18285 PF01323 DSBA-like thioredoxin domain AYR70_18295 PF13419 Haloacid dehalogenase-like hydrolase AYR70_18300 PF00106 short chain dehydrogenase AYR70_18315 PF00696 Amino acid kinase family AYR70_18315 PF00583 Acetyltransferase (GNAT) family AYR70_18320 PF09084 NMT1/THI5 like AYR70_18325 PF09084 NMT1/THI5 like AYR70_18330 PF00296 Luciferase-like monooxygenase AYR70_18335 PF00528 Binding-protein-dependent transport system inner membrane component AYR70_18340 PF00005 ABC transporter AYR70_18345 PF08362 YcdC-like protein, C-terminal region AYR70_18345 PF00440 Bacterial regulatory proteins, tetR family AYR70_18350 PF01048 Phosphorylase superfamily AYR70_18360 PF01687 Riboflavin kinase AYR70_18360 PF06574 FAD synthetase AYR70_18365 PF06827 Zinc finger found in FPG and IleRS AYR70_18365 PF00133 tRNA synthetases class I (I, L, M and V) AYR70_18365 PF08264 Anticodon-binding domain of tRNA AYR70_18370 PF01252 Signal peptidase (SPase) II AYR70_18375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR70_18415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYR70_18420 PF07859 alpha/beta hydrolase fold AYR70_18440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR70_18440 PF03466 LysR substrate binding domain AYR70_18445 PF01025 GrpE AYR70_18450 PF00012 Hsp70 protein AYR70_18470 PF13406 Transglycosylase SLT domain AYR70_18475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AYR70_18475 PF02222 ATP-grasp domain AYR70_18480 PF00731 AIR carboxylase AYR70_18490 PF08245 Mur ligase middle domain AYR70_18490 PF02875 Mur ligase family, glutamate ligase domain AYR70_18490 PF01225 Mur ligase family, catalytic domain AYR70_18500 PF01569 PAP2 superfamily AYR70_18505 PF03741 Integral membrane protein TerC family AYR70_18515 PF03738 Glutathionylspermidine synthase preATP-grasp AYR70_18520 PF00355 Rieske [2Fe-2S] domain AYR70_18525 PF01979 Amidohydrolase family AYR70_18535 PF00156 Phosphoribosyl transferase domain AYR70_18545 PF13098 Thioredoxin-like domain AYR70_18545 PF10411 Disulfide bond isomerase protein N-terminus AYR70_18550 PF16916 Dimerisation domain of Zinc Transporter AYR70_18550 PF01545 Cation efflux family AYR70_18555 PF02583 Metal-sensitive transcriptional repressor AYR70_18560 PF10396 GTP-binding protein TrmE N-terminus AYR70_18560 PF12631 MnmE helical domain AYR70_18560 PF01926 50S ribosome-binding GTPase AYR70_18565 PF02096 60Kd inner membrane protein AYR70_18565 PF14849 YidC periplasmic domain AYR70_18570 PF01809 Putative membrane protein insertion efficiency factor AYR70_18575 PF00825 Ribonuclease P AYR70_18580 PF00468 Ribosomal protein L34