AYR67_00005 PF00308 Bacterial dnaA protein AYR67_00005 PF08299 Bacterial dnaA protein helix-turn-helix AYR67_00005 PF11638 DnaA N-terminal domain AYR67_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AYR67_00010 PF02767 DNA polymerase III beta subunit, central domain AYR67_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AYR67_00015 PF02463 RecF/RecN/SMC N terminal domain AYR67_00020 PF00204 DNA gyrase B AYR67_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AYR67_00020 PF01751 Toprim domain AYR67_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_00025 PF07361 Cytochrome b562 AYR67_00030 PF09335 AYR67_00030 AYR67_00035 PF00005 ABC transporter AYR67_00035 PF12848 ABC transporter AYR67_00055 PF01521 Iron-sulphur cluster biosynthesis AYR67_00060 PF00561 alpha/beta hydrolase fold AYR67_00065 PF03702 Uncharacterised protein family (UPF0075) AYR67_00070 PF00579 tRNA synthetases class I (W and Y) AYR67_00100 PF00043 Glutathione S-transferase, C-terminal domain AYR67_00100 PF13417 Glutathione S-transferase, N-terminal domain AYR67_00110 PF00209 Sodium:neurotransmitter symporter family AYR67_00115 PF16951 AYR67_00115 AYR67_00120 PF01029 NusB family AYR67_00120 PF01189 NOL1/NOP2/sun family AYR67_00120 PF17125 AYR67_00120 AYR67_00125 PF00551 Formyl transferase AYR67_00125 PF02911 Formyl transferase, C-terminal domain AYR67_00130 PF00920 Dehydratase family AYR67_00140 PF01925 AYR67_00140 AYR67_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_00145 PF03466 LysR substrate binding domain AYR67_00150 PF00860 Permease family AYR67_00155 PF00311 Phosphoenolpyruvate carboxylase AYR67_00160 PF00440 Bacterial regulatory proteins, tetR family AYR67_00160 PF14246 AefR-like transcriptional repressor, C-terminal region AYR67_00165 PF16576 AYR67_00165 AYR67_00170 PF00873 AcrB/AcrD/AcrF family AYR67_00180 PF00226 DnaJ domain AYR67_00180 PF00684 DnaJ central domain AYR67_00180 PF01556 DnaJ C terminal domain AYR67_00190 PF01113 Dihydrodipicolinate reductase, N-terminus AYR67_00190 PF05173 Dihydrodipicolinate reductase, C-terminus AYR67_00195 PF01852 START domain AYR67_00200 PF07690 Major Facilitator Superfamily AYR67_00205 PF00248 Aldo/keto reductase family AYR67_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_00210 PF03466 LysR substrate binding domain AYR67_00220 PF00155 Aminotransferase class I and II AYR67_00220 PF00392 Bacterial regulatory proteins, gntR family AYR67_00225 PF00107 Zinc-binding dehydrogenase AYR67_00225 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_00230 PF03352 Methyladenine glycosylase AYR67_00240 PF01551 Peptidase family M23 AYR67_00245 PF00633 Helix-hairpin-helix motif AYR67_00245 PF00730 HhH-GPD superfamily base excision DNA repair protein AYR67_00245 PF14815 NUDIX domain AYR67_00250 PF01230 HIT domain AYR67_00255 PF01738 Dienelactone hydrolase family AYR67_00260 PF07043 AYR67_00260 AYR67_00265 PF03692 AYR67_00265 AYR67_00270 PF07995 Glucose / Sorbosone dehydrogenase AYR67_00275 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_00275 PF12002 MgsA AAA+ ATPase C terminal AYR67_00275 PF16193 AYR67_00275 AYR67_00280 PF01226 Formate/nitrite transporter AYR67_00290 PF01259 SAICAR synthetase AYR67_00300 PF00701 Dihydrodipicolinate synthetase family AYR67_00305 PF00857 Isochorismatase family AYR67_00310 PF01758 Sodium Bile acid symporter family AYR67_00315 PF01554 MatE AYR67_00320 PF04463 AYR67_00320 AYR67_00325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR67_00325 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AYR67_00330 PF01614 Bacterial transcriptional regulator AYR67_00330 PF09339 IclR helix-turn-helix domain AYR67_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR67_00340 PF02798 Glutathione S-transferase, N-terminal domain AYR67_00340 PF14497 Glutathione S-transferase, C-terminal domain AYR67_00345 PF01557 Fumarylacetoacetate (FAA) hydrolase family AYR67_00345 PF09298 Fumarylacetoacetase N-terminal AYR67_00350 PF00324 Amino acid permease AYR67_00355 PF08291 Peptidase M15 AYR67_00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYR67_00360 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYR67_00365 PF01757 AYR67_00365 AYR67_00370 PF00392 Bacterial regulatory proteins, gntR family AYR67_00370 PF07702 UTRA domain AYR67_00375 PF05962 HutD AYR67_00380 PF01175 Urocanase AYR67_00380 PF17391 AYR67_00380 AYR67_00380 PF17392 AYR67_00380 AYR67_00385 PF00221 Aromatic amino acid lyase AYR67_00390 PF00324 Amino acid permease AYR67_00395 PF01979 Amidohydrolase family AYR67_00400 PF00491 Arginase family AYR67_00405 PF05960 Bacterial protein of unknown function (DUF885) AYR67_00410 PF13419 Haloacid dehalogenase-like hydrolase AYR67_00415 PF01177 Asp/Glu/Hydantoin racemase AYR67_00420 PF01380 SIS domain AYR67_00420 PF13522 Glutamine amidotransferase domain AYR67_00425 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_00425 PF12804 MobA-like NTP transferase domain AYR67_00425 PF14602 Hexapeptide repeat of succinyl-transferase AYR67_00430 PF04608 Phosphatidylglycerophosphatase A AYR67_00435 PF00586 AIR synthase related protein, N-terminal domain AYR67_00435 PF02769 AIR synthase related protein, C-terminal domain AYR67_00440 PF01029 NusB family AYR67_00445 PF00885 6,7-dimethyl-8-ribityllumazine synthase AYR67_00450 PF00925 GTP cyclohydrolase II AYR67_00450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYR67_00460 PF12710 haloacid dehalogenase-like hydrolase AYR67_00460 PF13740 ACT domain AYR67_00475 PF02580 D-Tyr-tRNA(Tyr) deacylase AYR67_00480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYR67_00485 PF00581 Rhodanese-like domain AYR67_00490 PF02666 AYR67_00490 AYR67_00495 PF03583 Secretory lipase AYR67_00500 PF00512 His Kinase A (phospho-acceptor) domain AYR67_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_00500 PF11808 AYR67_00500 AYR67_00500 PF13188 PAS domain AYR67_00505 PF00072 Response regulator receiver domain AYR67_00505 PF00486 Transcriptional regulatory protein, C terminal AYR67_00515 PF00106 short chain dehydrogenase AYR67_00520 PF01554 MatE AYR67_00525 PF00155 Aminotransferase class I and II AYR67_00530 PF04286 AYR67_00530 AYR67_00540 PF06041 Bacterial protein of unknown function (DUF924) AYR67_00545 PF04262 Glutamate-cysteine ligase AYR67_00550 PF02600 Disulfide bond formation protein DsbB AYR67_00560 PF13737 AYR67_00560 AYR67_00570 PF00204 DNA gyrase B AYR67_00570 PF00986 DNA gyrase B subunit, carboxyl terminus AYR67_00570 PF01751 Toprim domain AYR67_00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_00575 PF00106 short chain dehydrogenase AYR67_00580 PF04115 Ureidoglycolate hydrolase AYR67_00585 PF03561 Allantoicase repeat AYR67_00590 PF01494 FAD binding domain AYR67_00595 PF03502 Nucleoside-specific channel-forming protein, Tsx AYR67_00600 PF00860 Permease family AYR67_00605 PF00576 HIUase/Transthyretin family AYR67_00610 PF09349 OHCU decarboxylase AYR67_00615 PF01522 Polysaccharide deacetylase AYR67_00620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AYR67_00630 PF13557 AYR67_00630 AYR67_00635 PF00085 Thioredoxin AYR67_00635 PF02683 AYR67_00635 AYR67_00635 PF11412 Disulphide bond corrector protein DsbC AYR67_00640 PF00990 GGDEF domain AYR67_00645 PF07859 alpha/beta hydrolase fold AYR67_00650 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AYR67_00655 PF03960 ArsC family AYR67_00660 PF03372 Endonuclease/Exonuclease/phosphatase family AYR67_00665 PF00156 Phosphoribosyl transferase domain AYR67_00670 PF00593 TonB dependent receptor AYR67_00670 PF07715 TonB-dependent Receptor Plug Domain AYR67_00675 PF08410 AYR67_00675 AYR67_00680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AYR67_00680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AYR67_00685 PF03033 Glycosyltransferase family 28 N-terminal domain AYR67_00685 PF04101 Glycosyltransferase family 28 C-terminal domain AYR67_00690 PF01225 Mur ligase family, catalytic domain AYR67_00690 PF02875 Mur ligase family, glutamate ligase domain AYR67_00690 PF08245 Mur ligase middle domain AYR67_00695 PF01820 D-ala D-ala ligase N-terminus AYR67_00695 PF07478 D-ala D-ala ligase C-terminus AYR67_00700 PF03799 Cell division protein FtsQ AYR67_00700 PF08478 POTRA domain, FtsQ-type AYR67_00705 PF02491 SHS2 domain inserted in FTSA AYR67_00705 PF14450 Cell division protein FtsA AYR67_00710 PF00091 Tubulin/FtsZ family, GTPase domain AYR67_00710 PF12327 FtsZ family, C-terminal domain AYR67_00715 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AYR67_00720 PF05258 AYR67_00720 AYR67_00725 PF01551 Peptidase family M23 AYR67_00730 PF00456 Transketolase, thiamine diphosphate binding domain AYR67_00735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYR67_00735 PF00364 Biotin-requiring enzyme AYR67_00735 PF02817 e3 binding domain AYR67_00745 PF01169 AYR67_00745 AYR67_00750 PF00593 TonB dependent receptor AYR67_00750 PF07715 TonB-dependent Receptor Plug Domain AYR67_00755 PF00753 Metallo-beta-lactamase superfamily AYR67_00760 PF03692 AYR67_00760 AYR67_00765 PF00478 IMP dehydrogenase / GMP reductase domain AYR67_00765 PF00571 CBS domain AYR67_00770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR67_00770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR67_00770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR67_00770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR67_00775 PF01243 Pyridoxamine 5'-phosphate oxidase AYR67_00775 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AYR67_00780 PF01368 DHH family AYR67_00780 PF02272 DHHA1 domain AYR67_00785 PF16956 AYR67_00785 AYR67_00790 PF00472 RF-1 domain AYR67_00790 PF03462 PCRF domain AYR67_00795 PF12840 Helix-turn-helix domain AYR67_00800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR67_00805 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AYR67_00810 PF04452 RNA methyltransferase AYR67_00815 PF00924 Mechanosensitive ion channel AYR67_00820 PF05656 AYR67_00820 AYR67_00825 PF00501 AMP-binding enzyme AYR67_00825 PF13193 AMP-binding enzyme C-terminal domain AYR67_00825 PF16177 AYR67_00825 AYR67_00830 PF00857 Isochorismatase family AYR67_00835 PF13412 Winged helix-turn-helix DNA-binding AYR67_00840 PF00296 Luciferase-like monooxygenase AYR67_00845 PF03358 NADPH-dependent FMN reductase AYR67_00850 PF00072 Response regulator receiver domain AYR67_00850 PF00196 Bacterial regulatory proteins, luxR family AYR67_00860 PF00072 Response regulator receiver domain AYR67_00860 PF00512 His Kinase A (phospho-acceptor) domain AYR67_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_00860 PF12860 AYR67_00860 AYR67_00865 PF04341 AYR67_00865 AYR67_00870 PF00474 Sodium:solute symporter family AYR67_00875 PF07885 Ion channel AYR67_00880 PF02028 BCCT family transporter AYR67_00885 PF16956 AYR67_00885 AYR67_00890 PF00990 GGDEF domain AYR67_00895 PF00005 ABC transporter AYR67_00900 PF00440 Bacterial regulatory proteins, tetR family AYR67_00900 PF16925 AYR67_00900 AYR67_00905 PF00107 Zinc-binding dehydrogenase AYR67_00905 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_00910 PF06993 AYR67_00910 AYR67_00915 PF06942 AYR67_00915 AYR67_00920 PF03070 TENA/THI-4/PQQC family AYR67_00925 PF04332 AYR67_00925 AYR67_00930 PF07690 Major Facilitator Superfamily AYR67_00935 PF00436 Single-strand binding protein family AYR67_00940 PF05437 AYR67_00940 AYR67_00945 PF03591 AYR67_00945 AYR67_00950 PF01381 Helix-turn-helix AYR67_00950 PF07883 Cupin domain AYR67_00955 PF00324 Amino acid permease AYR67_00960 PF00155 Aminotransferase class I and II AYR67_00960 PF00392 Bacterial regulatory proteins, gntR family AYR67_00965 PF00202 Aminotransferase class-III AYR67_00970 PF00171 Aldehyde dehydrogenase family AYR67_00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_00975 PF03466 LysR substrate binding domain AYR67_00980 PF00857 Isochorismatase family AYR67_00985 PF02678 Pirin AYR67_00985 PF05726 Pirin C-terminal cupin domain AYR67_00995 PF13489 Methyltransferase domain AYR67_01000 PF04828 Glutathione-dependent formaldehyde-activating enzyme AYR67_01010 PF07690 Major Facilitator Superfamily AYR67_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_01015 PF03466 LysR substrate binding domain AYR67_01020 PF00892 EamA-like transporter family AYR67_01035 PF00248 Aldo/keto reductase family AYR67_01040 PF12833 Helix-turn-helix domain AYR67_01045 PF00440 Bacterial regulatory proteins, tetR family AYR67_01050 PF08238 Sel1 repeat AYR67_01065 PF01638 HxlR-like helix-turn-helix AYR67_01070 PF02525 Flavodoxin-like fold AYR67_01090 PF02705 AYR67_01090 AYR67_01100 PF01223 DNA/RNA non-specific endonuclease AYR67_01105 PF01810 AYR67_01105 AYR67_01115 PF00230 Major intrinsic protein AYR67_01120 PF12625 AYR67_01120 AYR67_01120 PF12833 Helix-turn-helix domain AYR67_01130 PF00977 Histidine biosynthesis protein AYR67_01135 PF01636 Phosphotransferase enzyme family AYR67_01140 PF00313 'Cold-shock' DNA-binding domain AYR67_01140 PF06961 AYR67_01140 AYR67_01150 PF03992 Antibiotic biosynthesis monooxygenase AYR67_01155 PF00892 EamA-like transporter family AYR67_01160 PF01381 Helix-turn-helix AYR67_01160 PF07883 Cupin domain AYR67_01165 PF00977 Histidine biosynthesis protein AYR67_01170 PF01612 3'-5' exonuclease AYR67_01175 PF05656 AYR67_01175 AYR67_01180 PF00117 Glutamine amidotransferase class-I AYR67_01185 PF00475 Imidazoleglycerol-phosphate dehydratase AYR67_01190 PF12568 Acetyltransferase (GNAT) domain AYR67_01205 PF00583 Acetyltransferase (GNAT) family AYR67_01210 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AYR67_01210 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AYR67_01215 PF00512 His Kinase A (phospho-acceptor) domain AYR67_01215 PF00672 HAMP domain AYR67_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_01220 PF00072 Response regulator receiver domain AYR67_01220 PF00486 Transcriptional regulatory protein, C terminal AYR67_01225 PF00575 S1 RNA binding domain AYR67_01225 PF09371 Tex-like protein N-terminal domain AYR67_01225 PF12836 Helix-hairpin-helix motif AYR67_01225 PF16921 AYR67_01225 AYR67_01230 PF00484 Carbonic anhydrase AYR67_01230 PF00916 AYR67_01230 AYR67_01235 PF00106 short chain dehydrogenase AYR67_01240 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR67_01245 PF00005 ABC transporter AYR67_01245 PF12848 ABC transporter AYR67_01250 PF08238 Sel1 repeat AYR67_01270 PF04191 Phospholipid methyltransferase AYR67_01280 PF02321 Outer membrane efflux protein AYR67_01285 PF16576 AYR67_01285 AYR67_01290 PF00873 AcrB/AcrD/AcrF family AYR67_01295 PF01545 Cation efflux family AYR67_01325 PF00324 Amino acid permease AYR67_01340 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR67_01350 PF13531 Bacterial extracellular solute-binding protein AYR67_01355 PF01795 MraW methylase family AYR67_01360 PF04999 AYR67_01360 AYR67_01365 PF00905 Penicillin binding protein transpeptidase domain AYR67_01365 PF03717 Penicillin-binding Protein dimerisation domain AYR67_01370 PF02875 Mur ligase family, glutamate ligase domain AYR67_01370 PF08245 Mur ligase middle domain AYR67_01375 PF01225 Mur ligase family, catalytic domain AYR67_01375 PF02875 Mur ligase family, glutamate ligase domain AYR67_01375 PF08245 Mur ligase middle domain AYR67_01380 PF00953 Glycosyl transferase family 4 AYR67_01390 PF08241 Methyltransferase domain AYR67_01395 PF00905 Penicillin binding protein transpeptidase domain AYR67_01395 PF00912 Transglycosylase AYR67_01395 PF17092 AYR67_01395 AYR67_01400 PF11104 Type IV pilus assembly protein PilM; AYR67_01405 PF05137 AYR67_01405 AYR67_01410 PF04350 Pilus assembly protein, PilO AYR67_01415 PF04351 Pilus assembly protein, PilP AYR67_01420 PF00263 AYR67_01420 AYR67_01420 PF03958 Bacterial type II/III secretion system short domain AYR67_01420 PF07660 Secretin and TonB N terminus short domain AYR67_01420 PF11741 AMIN domain AYR67_01425 PF01202 Shikimate kinase AYR67_01430 PF01761 3-dehydroquinate synthase AYR67_01440 PF00310 Glutamine amidotransferases class-II AYR67_01440 PF01493 GXGXG motif AYR67_01440 PF01645 Conserved region in glutamate synthase AYR67_01440 PF04898 Glutamate synthase central domain AYR67_01445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_01445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AYR67_01450 PF10118 AYR67_01450 AYR67_01455 PF04011 LemA family AYR67_01460 PF04536 TLP18 AYR67_01465 PF04536 TLP18 AYR67_01475 PF04932 AYR67_01475 AYR67_01480 PF04932 AYR67_01480 AYR67_01480 PF11846 AYR67_01480 AYR67_01480 PF15864 AYR67_01480 AYR67_01485 PF00210 Ferritin-like domain AYR67_01490 PF04324 BFD-like [2Fe-2S] binding domain AYR67_01495 PF01042 Endoribonuclease L-PSP AYR67_01500 PF02824 TGS domain AYR67_01500 PF13328 HD domain AYR67_01505 PF01192 RNA polymerase Rpb6 AYR67_01510 PF00625 Guanylate kinase AYR67_01515 PF02401 LytB protein AYR67_01520 PF07963 Prokaryotic N-terminal methylation motif AYR67_01520 PF12019 Type II transport protein GspH AYR67_01525 PF07963 Prokaryotic N-terminal methylation motif AYR67_01530 PF07963 Prokaryotic N-terminal methylation motif AYR67_01530 PF16074 AYR67_01530 AYR67_01540 PF05567 Neisseria PilC beta-propeller domain AYR67_01540 PF13519 von Willebrand factor type A domain AYR67_01545 PF07963 Prokaryotic N-terminal methylation motif AYR67_01545 PF16732 AYR67_01545 AYR67_01550 PF07963 Prokaryotic N-terminal methylation motif AYR67_01550 PF16732 AYR67_01550 AYR67_01555 PF00886 Ribosomal protein S16 AYR67_01560 PF01782 RimM N-terminal domain AYR67_01560 PF05239 PRC-barrel domain AYR67_01565 PF01746 tRNA (Guanine-1)-methyltransferase AYR67_01570 PF01245 Ribosomal protein L19 AYR67_01575 PF00561 alpha/beta hydrolase fold AYR67_01580 PF03280 Proteobacterial lipase chaperone protein AYR67_01585 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYR67_01585 PF09157 Pseudouridine synthase II TruB, C-terminal AYR67_01585 PF16198 AYR67_01585 AYR67_01590 PF01925 AYR67_01590 AYR67_01595 PF01814 Hemerythrin HHE cation binding domain AYR67_01600 PF00892 EamA-like transporter family AYR67_01605 PF00892 EamA-like transporter family AYR67_01610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR67_01610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR67_01615 PF01565 FAD binding domain AYR67_01615 PF02913 FAD linked oxidases, C-terminal domain AYR67_01625 PF03992 Antibiotic biosynthesis monooxygenase AYR67_01630 PF02525 Flavodoxin-like fold AYR67_01640 PF07690 Major Facilitator Superfamily AYR67_01645 PF12805 AYR67_01645 AYR67_01645 PF13515 AYR67_01645 AYR67_01650 PF00080 Copper/zinc superoxide dismutase (SODC) AYR67_01655 PF01594 AYR67_01655 AYR67_01660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AYR67_01665 PF10107 AYR67_01665 AYR67_01680 PF08241 Methyltransferase domain AYR67_01690 PF00324 Amino acid permease AYR67_01695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR67_01695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYR67_01700 PF00202 Aminotransferase class-III AYR67_01705 PF04958 Arginine N-succinyltransferase beta subunit AYR67_01710 PF00171 Aldehyde dehydrogenase family AYR67_01715 PF04996 Succinylarginine dihydrolase AYR67_01720 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AYR67_01735 PF00082 Subtilase family AYR67_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_01750 PF03466 LysR substrate binding domain AYR67_01755 PF00892 EamA-like transporter family AYR67_01760 PF03795 YCII-related domain AYR67_01765 PF02092 AYR67_01765 AYR67_01765 PF05746 DALR anticodon binding domain AYR67_01770 PF02091 Glycyl-tRNA synthetase alpha subunit AYR67_01780 PF07007 Protein of unknown function (DUF1311) AYR67_01790 PF13566 AYR67_01790 AYR67_01795 PF00571 CBS domain AYR67_01795 PF04982 AYR67_01795 AYR67_01800 PF04024 AYR67_01800 AYR67_01810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_01810 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_01810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_01810 PF12418 AYR67_01810 AYR67_01810 PF12806 AYR67_01810 AYR67_01820 PF01488 Shikimate / quinate 5-dehydrogenase AYR67_01820 PF08501 Shikimate dehydrogenase substrate binding domain AYR67_01825 PF01218 Coproporphyrinogen III oxidase AYR67_01830 PF00925 GTP cyclohydrolase II AYR67_01835 PF02779 Transketolase, pyrimidine binding domain AYR67_01835 PF02780 Transketolase, C-terminal domain AYR67_01835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AYR67_01840 PF00459 Inositol monophosphatase family AYR67_01845 PF00270 DEAD/DEAH box helicase AYR67_01845 PF00271 Helicase conserved C-terminal domain AYR67_01855 PF00005 ABC transporter AYR67_01860 PF02405 AYR67_01860 AYR67_01865 PF02470 AYR67_01865 AYR67_01870 PF05494 Toluene tolerance, Ttg2 AYR67_01875 PF13466 STAS domain AYR67_01880 PF01544 CorA-like Mg2+ transporter protein AYR67_01885 PF03641 Possible lysine decarboxylase AYR67_01890 PF00293 NUDIX domain AYR67_01895 PF00156 Phosphoribosyl transferase domain AYR67_01900 PF00270 DEAD/DEAH box helicase AYR67_01900 PF00271 Helicase conserved C-terminal domain AYR67_01900 PF17191 AYR67_01900 AYR67_01905 PF13460 NADH(P)-binding AYR67_01915 PF01553 Acyltransferase AYR67_01920 PF13622 Thioesterase-like superfamily AYR67_01925 PF00375 Sodium:dicarboxylate symporter family AYR67_01930 PF10118 AYR67_01930 AYR67_01935 PF01926 50S ribosome-binding GTPase AYR67_01940 PF02082 Transcriptional regulator AYR67_01945 PF00042 Globin AYR67_01950 PF05872 AYR67_01950 AYR67_01955 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR67_01960 PF00117 Glutamine amidotransferase class-I AYR67_01965 PF00338 Ribosomal protein S10p/S20e AYR67_01970 PF00297 Ribosomal protein L3 AYR67_01975 PF00573 Ribosomal protein L4/L1 family AYR67_01980 PF00276 Ribosomal protein L23 AYR67_01985 PF00181 Ribosomal Proteins L2, RNA binding domain AYR67_01985 PF03947 Ribosomal Proteins L2, C-terminal domain AYR67_01990 PF00203 Ribosomal protein S19 AYR67_01995 PF00237 Ribosomal protein L22p/L17e AYR67_02000 PF00189 Ribosomal protein S3, C-terminal domain AYR67_02000 PF07650 KH domain AYR67_02005 PF00252 Ribosomal protein L16p/L10e AYR67_02010 PF00831 Ribosomal L29 protein AYR67_02015 PF00366 Ribosomal protein S17 AYR67_02020 PF00238 Ribosomal protein L14p/L23e AYR67_02025 PF00467 KOW motif AYR67_02025 PF17136 AYR67_02025 AYR67_02030 PF00281 Ribosomal protein L5 AYR67_02030 PF00673 ribosomal L5P family C-terminus AYR67_02035 PF00253 Ribosomal protein S14p/S29e AYR67_02040 PF00410 Ribosomal protein S8 AYR67_02045 PF00347 Ribosomal protein L6 AYR67_02050 PF00861 Ribosomal L18p/L5e family AYR67_02055 PF00333 Ribosomal protein S5, N-terminal domain AYR67_02055 PF03719 Ribosomal protein S5, C-terminal domain AYR67_02060 PF00327 Ribosomal protein L30p/L7e AYR67_02065 PF00828 Ribosomal protein L18e/L15 AYR67_02070 PF00344 SecY translocase AYR67_02075 PF00444 Ribosomal protein L36 AYR67_02080 PF00416 Ribosomal protein S13/S18 AYR67_02085 PF00411 Ribosomal protein S11 AYR67_02090 PF00163 Ribosomal protein S4/S9 N-terminal domain AYR67_02090 PF01479 S4 domain AYR67_02095 PF01000 RNA polymerase Rpb3/RpoA insert domain AYR67_02095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYR67_02095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYR67_02100 PF01196 Ribosomal protein L17 AYR67_02105 PF00743 Flavin-binding monooxygenase-like AYR67_02105 PF13450 NAD(P)-binding Rossmann-like domain AYR67_02110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_02110 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_02110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_02115 PF03937 Flavinator of succinate dehydrogenase AYR67_02130 PF01694 Rhomboid family AYR67_02135 PF06808 AYR67_02135 AYR67_02145 PF09526 AYR67_02145 AYR67_02150 PF01432 Peptidase family M3 AYR67_02155 PF00575 S1 RNA binding domain AYR67_02155 PF00773 RNB domain AYR67_02155 PF08206 Ribonuclease B OB domain AYR67_02175 PF12710 haloacid dehalogenase-like hydrolase AYR67_02190 PF00881 Nitroreductase family AYR67_02200 PF01557 Fumarylacetoacetate (FAA) hydrolase family AYR67_02205 PF02311 AraC-like ligand binding domain AYR67_02205 PF12833 Helix-turn-helix domain AYR67_02210 PF00892 EamA-like transporter family AYR67_02215 PF03631 AYR67_02215 AYR67_02220 PF03358 NADPH-dependent FMN reductase AYR67_02230 PF11306 Protein of unknown function (DUF3108) AYR67_02240 PF03544 Gram-negative bacterial TonB protein C-terminal AYR67_02245 PF02130 Uncharacterized protein family UPF0054 AYR67_02250 PF02562 PhoH-like protein AYR67_02255 PF00919 Uncharacterized protein family UPF0004 AYR67_02255 PF01938 TRAM domain AYR67_02255 PF04055 Radical SAM superfamily AYR67_02260 PF01464 Transglycosylase SLT domain AYR67_02270 PF00056 lactate/malate dehydrogenase, NAD binding domain AYR67_02270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYR67_02275 PF10982 Protein of unknown function (DUF2789) AYR67_02285 PF13640 2OG-Fe(II) oxygenase superfamily AYR67_02290 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AYR67_02295 PF01066 CDP-alcohol phosphatidyltransferase AYR67_02330 PF09413 Domain of unknown function (DUF2007) AYR67_02335 PF14066 AYR67_02335 AYR67_02340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_02340 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_02340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_02345 PF00440 Bacterial regulatory proteins, tetR family AYR67_02350 PF07287 AYR67_02350 AYR67_02355 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_02360 PF01039 Carboxyl transferase domain AYR67_02365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_02365 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_02365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_02370 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_02375 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AYR67_02375 PF00364 Biotin-requiring enzyme AYR67_02375 PF02785 Biotin carboxylase C-terminal domain AYR67_02375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR67_02385 PF04386 Stringent starvation protein B AYR67_02390 PF02798 Glutathione S-transferase, N-terminal domain AYR67_02395 PF00380 Ribosomal protein S9/S16 AYR67_02400 PF00572 Ribosomal protein L13 AYR67_02405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AYR67_02410 PF00398 Ribosomal RNA adenine dimethylase AYR67_02415 PF00149 Calcineurin-like phosphoesterase AYR67_02420 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AYR67_02425 PF04172 AYR67_02425 AYR67_02435 PF01926 50S ribosome-binding GTPase AYR67_02435 PF13167 AYR67_02435 AYR67_02435 PF16360 AYR67_02435 AYR67_02440 PF01553 Acyltransferase AYR67_02445 PF13091 PLD-like domain AYR67_02450 PF00149 Calcineurin-like phosphoesterase AYR67_02455 PF00691 OmpA family AYR67_02460 PF00990 GGDEF domain AYR67_02460 PF17152 AYR67_02460 AYR67_02465 PF13689 AYR67_02465 AYR67_02495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR67_02495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_02505 PF04273 Putative phosphatase (DUF442) AYR67_02510 PF12146 Putative lysophospholipase AYR67_02515 PF00085 Thioredoxin AYR67_02520 PF03061 Thioesterase superfamily AYR67_02525 PF14539 Domain of unknown function (DUF4442) AYR67_02530 PF04461 Protein of unknown function (DUF520) AYR67_02535 PF00581 Rhodanese-like domain AYR67_02540 PF01266 FAD dependent oxidoreductase AYR67_02540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AYR67_02550 PF03795 YCII-related domain AYR67_02555 PF04279 AYR67_02555 AYR67_02560 PF02811 PHP domain AYR67_02565 PF01062 AYR67_02565 AYR67_02570 PF04002 RadC-like JAB domain AYR67_02575 PF02441 Flavoprotein AYR67_02575 PF04127 DNA / pantothenate metabolism flavoprotein AYR67_02580 PF02355 Protein export membrane protein AYR67_02580 PF07549 SecD/SecF GG Motif AYR67_02585 PF02355 Protein export membrane protein AYR67_02585 PF07549 SecD/SecF GG Motif AYR67_02585 PF13721 SecD export protein N-terminal TM region AYR67_02590 PF02699 Preprotein translocase subunit AYR67_02595 PF01702 Queuine tRNA-ribosyltransferase AYR67_02600 PF04011 LemA family AYR67_02610 PF02547 Queuosine biosynthesis protein AYR67_02620 PF00512 His Kinase A (phospho-acceptor) domain AYR67_02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_02625 PF03710 Glutamate-ammonia ligase adenylyltransferase AYR67_02625 PF08335 GlnD PII-uridylyltransferase AYR67_02630 PF01063 Aminotransferase class IV AYR67_02635 PF06258 AYR67_02635 AYR67_02640 PF13524 Glycosyl transferases group 1 AYR67_02645 PF01522 Polysaccharide deacetylase AYR67_02650 PF00535 Glycosyl transferase family 2 AYR67_02655 PF00534 Glycosyl transferases group 1 AYR67_02655 PF13439 Glycosyltransferase Family 4 AYR67_02665 PF01755 AYR67_02665 AYR67_02680 PF11380 AYR67_02680 AYR67_02680 PF17102 AYR67_02680 AYR67_02685 PF00152 tRNA synthetases class II (D, K and N) AYR67_02685 PF01336 OB-fold nucleic acid binding domain AYR67_02685 PF02938 GAD domain AYR67_02690 PF13803 AYR67_02690 AYR67_02695 PF00593 TonB dependent receptor AYR67_02695 PF07715 TonB-dependent Receptor Plug Domain AYR67_02700 PF13091 PLD-like domain AYR67_02710 PF11776 Domain of unknown function (DUF3315) AYR67_02715 PF06146 AYR67_02715 AYR67_02720 PF00043 Glutathione S-transferase, C-terminal domain AYR67_02720 PF02798 Glutathione S-transferase, N-terminal domain AYR67_02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_02725 PF03466 LysR substrate binding domain AYR67_02730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_02730 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_02730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_02730 PF12418 AYR67_02730 AYR67_02730 PF12806 AYR67_02730 AYR67_02735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_02735 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_02735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_02735 PF12418 AYR67_02735 AYR67_02735 PF12806 AYR67_02735 AYR67_02745 PF00512 His Kinase A (phospho-acceptor) domain AYR67_02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_02750 PF00072 Response regulator receiver domain AYR67_02750 PF00486 Transcriptional regulatory protein, C terminal AYR67_02755 PF02696 AYR67_02755 AYR67_02760 PF00487 AYR67_02760 AYR67_02765 PF03724 META domain AYR67_02770 PF03009 Glycerophosphoryl diester phosphodiesterase family AYR67_02775 PF01923 Cobalamin adenosyltransferase AYR67_02780 PF00593 TonB dependent receptor AYR67_02780 PF07715 TonB-dependent Receptor Plug Domain AYR67_02785 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AYR67_02790 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_02795 PF07566 Domain of Unknown Function (DUF1543) AYR67_02800 PF10974 AYR67_02800 AYR67_02805 PF10118 AYR67_02805 AYR67_02810 PF12625 AYR67_02810 AYR67_02810 PF12833 Helix-turn-helix domain AYR67_02815 PF00290 Tryptophan synthase alpha chain AYR67_02820 PF01039 Carboxyl transferase domain AYR67_02825 PF08245 Mur ligase middle domain AYR67_02830 PF05036 Sporulation related domain AYR67_02835 PF00782 Dual specificity phosphatase, catalytic domain AYR67_02840 PF00753 Metallo-beta-lactamase superfamily AYR67_02845 PF00578 AhpC/TSA family AYR67_02845 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYR67_02850 PF01043 SecA preprotein cross-linking domain AYR67_02850 PF02810 SEC-C motif AYR67_02850 PF07516 SecA Wing and Scaffold domain AYR67_02850 PF07517 SecA DEAD-like domain AYR67_02860 PF00083 Sugar (and other) transporter AYR67_02865 PF03006 AYR67_02865 AYR67_02875 PF13673 Acetyltransferase (GNAT) domain AYR67_02880 PF01734 Patatin-like phospholipase AYR67_02890 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_02890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR67_02890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR67_02895 PF00108 Thiolase, N-terminal domain AYR67_02895 PF02803 Thiolase, C-terminal domain AYR67_02900 PF12625 AYR67_02900 AYR67_02900 PF12833 Helix-turn-helix domain AYR67_02905 PF02515 CoA-transferase family III AYR67_02910 PF04966 Carbohydrate-selective porin, OprB family AYR67_02915 PF01011 PQQ enzyme repeat AYR67_02915 PF13360 PQQ-like domain AYR67_02920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYR67_02920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYR67_02925 PF06073 AYR67_02925 AYR67_02930 PF00893 Small Multidrug Resistance protein AYR67_02935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR67_02940 PF00108 Thiolase, N-terminal domain AYR67_02940 PF02803 Thiolase, C-terminal domain AYR67_02945 PF12019 Type II transport protein GspH AYR67_02950 PF00691 OmpA family AYR67_02950 PF13505 Outer membrane protein beta-barrel domain AYR67_02960 PF01139 tRNA-splicing ligase RtcB AYR67_02965 PF00324 Amino acid permease AYR67_02970 PF05175 Methyltransferase small domain AYR67_02970 PF08468 Methyltransferase small domain N-terminal AYR67_02975 PF00860 Permease family AYR67_02980 PF00009 Elongation factor Tu GTP binding domain AYR67_02980 PF00679 Elongation factor G C-terminus AYR67_02980 PF03144 Elongation factor Tu domain 2 AYR67_02985 PF01741 Large-conductance mechanosensitive channel, MscL AYR67_02990 PF06094 AIG2-like family AYR67_02995 PF00639 PPIC-type PPIASE domain AYR67_03000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYR67_03000 PF06827 Zinc finger found in FPG and IleRS AYR67_03000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYR67_03005 PF02245 Methylpurine-DNA glycosylase (MPG) AYR67_03015 PF01609 Transposase DDE domain AYR67_03020 PF01609 Transposase DDE domain AYR67_03030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR67_03035 PF03547 AYR67_03035 AYR67_03040 PF08238 Sel1 repeat AYR67_03045 PF10411 Disulfide bond isomerase protein N-terminus AYR67_03045 PF13098 Thioredoxin-like domain AYR67_03050 PF01571 Aminomethyltransferase folate-binding domain AYR67_03055 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AYR67_03060 PF04343 AYR67_03060 AYR67_03065 PF03831 PhnA protein AYR67_03065 PF08274 PhnA Zinc-Ribbon AYR67_03070 PF07411 Domain of unknown function (DUF1508) AYR67_03075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR67_03075 PF03129 Anticodon binding domain AYR67_03075 PF04073 Aminoacyl-tRNA editing domain AYR67_03080 PF00873 AcrB/AcrD/AcrF family AYR67_03085 PF13437 HlyD family secretion protein AYR67_03085 PF13533 Biotin-lipoyl like AYR67_03095 PF00072 Response regulator receiver domain AYR67_03100 PF00072 Response regulator receiver domain AYR67_03105 PF01584 CheW-like domain AYR67_03110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AYR67_03115 PF00072 Response regulator receiver domain AYR67_03115 PF01584 CheW-like domain AYR67_03115 PF01627 Hpt domain AYR67_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_03125 PF01546 Peptidase family M20/M25/M40 AYR67_03125 PF07687 Peptidase dimerisation domain AYR67_03130 PF08085 AYR67_03130 AYR67_03135 PF08907 AYR67_03135 AYR67_03140 PF04304 AYR67_03140 AYR67_03145 PF03734 L,D-transpeptidase catalytic domain AYR67_03180 PF02698 DUF218 domain AYR67_03185 PF00175 Oxidoreductase NAD-binding domain AYR67_03185 PF00258 Flavodoxin AYR67_03185 PF03929 AYR67_03185 AYR67_03190 PF14317 AYR67_03190 AYR67_03195 PF12805 AYR67_03195 AYR67_03195 PF13515 AYR67_03195 AYR67_03200 PF07690 Major Facilitator Superfamily AYR67_03205 PF00881 Nitroreductase family AYR67_03215 PF01235 AYR67_03215 AYR67_03220 PF01734 Patatin-like phospholipase AYR67_03225 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_03230 PF05992 AYR67_03230 AYR67_03235 PF16142 AYR67_03235 AYR67_03240 PF06674 AYR67_03240 AYR67_03250 PF01965 DJ-1/PfpI family AYR67_03260 PF01609 Transposase DDE domain AYR67_03270 PF02637 GatB domain AYR67_03270 PF02934 GatB/GatE catalytic domain AYR67_03275 PF01425 Amidase AYR67_03280 PF02686 Glu-tRNAGln amidotransferase C subunit AYR67_03285 PF06723 MreB/Mbl protein AYR67_03290 PF04085 rod shape-determining protein MreC AYR67_03295 PF04093 AYR67_03295 AYR67_03300 PF02545 Maf-like protein AYR67_03305 PF00575 S1 RNA binding domain AYR67_03305 PF10150 Ribonuclease E/G family AYR67_03315 PF03007 AYR67_03315 AYR67_03315 PF06974 AYR67_03315 AYR67_03320 PF01507 Phosphoadenosine phosphosulfate reductase family AYR67_03325 PF12710 haloacid dehalogenase-like hydrolase AYR67_03330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AYR67_03335 PF02525 Flavodoxin-like fold AYR67_03340 PF12625 AYR67_03340 AYR67_03340 PF12833 Helix-turn-helix domain AYR67_03345 PF00487 AYR67_03345 AYR67_03350 PF08223 PaaX-like protein C-terminal domain AYR67_03355 PF02673 AYR67_03355 AYR67_03360 PF06719 AYR67_03360 AYR67_03360 PF12833 Helix-turn-helix domain AYR67_03365 PF00107 Zinc-binding dehydrogenase AYR67_03365 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_03370 PF01965 DJ-1/PfpI family AYR67_03380 PF00324 Amino acid permease AYR67_03385 PF04303 PrpF protein AYR67_03390 PF00348 Polyprenyl synthetase AYR67_03395 PF04237 YjbR AYR67_03400 PF01145 SPFH domain / Band 7 family AYR67_03405 PF01957 NfeD-like C-terminal, partner-binding AYR67_03410 PF01734 Patatin-like phospholipase AYR67_03415 PF01553 Acyltransferase AYR67_03420 PF13000 AYR67_03420 AYR67_03425 PF02530 AYR67_03425 AYR67_03430 PF00884 Sulfatase AYR67_03430 PF08019 AYR67_03430 AYR67_03435 PF00072 Response regulator receiver domain AYR67_03435 PF00486 Transcriptional regulatory protein, C terminal AYR67_03440 PF00512 His Kinase A (phospho-acceptor) domain AYR67_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_03445 PF01569 PAP2 superfamily AYR67_03450 PF00909 Ammonium Transporter Family AYR67_03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_03455 PF03466 LysR substrate binding domain AYR67_03460 PF03547 AYR67_03460 AYR67_03470 PF13649 Methyltransferase domain AYR67_03475 PF00133 tRNA synthetases class I (I, L, M and V) AYR67_03475 PF08264 Anticodon-binding domain of tRNA AYR67_03475 PF10458 Valyl tRNA synthetase tRNA binding arm AYR67_03485 PF00106 short chain dehydrogenase AYR67_03490 PF13577 SnoaL-like domain AYR67_03495 PF01906 Putative heavy-metal-binding AYR67_03500 PF01906 Putative heavy-metal-binding AYR67_03505 PF02321 Outer membrane efflux protein AYR67_03510 PF00873 AcrB/AcrD/AcrF family AYR67_03515 PF00529 HlyD family secretion protein AYR67_03515 PF16576 AYR67_03515 AYR67_03520 PF01569 PAP2 superfamily AYR67_03525 PF10136 AYR67_03525 AYR67_03530 PF00348 Polyprenyl synthetase AYR67_03540 PF00829 Ribosomal prokaryotic L21 protein AYR67_03545 PF01016 Ribosomal L27 protein AYR67_03550 PF03548 Outer membrane lipoprotein carrier protein LolA AYR67_03555 PF11738 Protein of unknown function (DUF3298) AYR67_03560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR67_03560 PF02403 Seryl-tRNA synthetase N-terminal domain AYR67_03565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYR67_03565 PF10414 Sirohaem synthase dimerisation region AYR67_03565 PF13241 Putative NAD(P)-binding AYR67_03570 PF00588 SpoU rRNA Methylase family AYR67_03575 PF01638 HxlR-like helix-turn-helix AYR67_03580 PF12724 Flavodoxin domain AYR67_03585 PF00324 Amino acid permease AYR67_03590 PF00465 Iron-containing alcohol dehydrogenase AYR67_03600 PF03099 Biotin/lipoate A/B protein ligase family AYR67_03605 PF04359 Protein of unknown function (DUF493) AYR67_03610 PF00140 Sigma-70 factor, region 1 AYR67_03610 PF03979 Sigma-70 factor, region 1 AYR67_03610 PF04539 Sigma-70 region 3 AYR67_03610 PF04542 Sigma-70 region 2 AYR67_03610 PF04545 Sigma-70, region 4 AYR67_03610 PF04546 Sigma-70, non-essential region AYR67_03620 PF03695 Uncharacterised protein family (UPF0149) AYR67_03630 PF00581 Rhodanese-like domain AYR67_03635 PF06945 AYR67_03635 AYR67_03640 PF00285 Citrate synthase AYR67_03645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYR67_03650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYR67_03655 PF00890 FAD binding domain AYR67_03655 PF02910 Fumarate reductase flavoprotein C-term AYR67_03660 PF13085 2Fe-2S iron-sulfur cluster binding domain AYR67_03660 PF13534 4Fe-4S dicluster domain AYR67_03665 PF00676 Dehydrogenase E1 component AYR67_03665 PF02779 Transketolase, pyrimidine binding domain AYR67_03665 PF16078 AYR67_03665 AYR67_03665 PF16870 AYR67_03665 AYR67_03670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYR67_03670 PF00364 Biotin-requiring enzyme AYR67_03670 PF02817 e3 binding domain AYR67_03675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR67_03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_03680 PF00549 CoA-ligase AYR67_03680 PF08442 ATP-grasp domain AYR67_03685 PF00549 CoA-ligase AYR67_03685 PF02629 CoA binding domain AYR67_03690 PF00579 tRNA synthetases class I (W and Y) AYR67_03695 PF05661 AYR67_03695 AYR67_03700 PF04228 AYR67_03700 AYR67_03705 PF00999 Sodium/hydrogen exchanger family AYR67_03720 PF09587 Bacterial capsule synthesis protein PGA_cap AYR67_03730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR67_03735 PF00582 Universal stress protein family AYR67_03740 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_03745 PF01272 Transcription elongation factor, GreA/GreB, C-term AYR67_03745 PF03449 Transcription elongation factor, N-terminal AYR67_03750 PF02142 MGS-like domain AYR67_03750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR67_03750 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR67_03755 PF00117 Glutamine amidotransferase class-I AYR67_03755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AYR67_03770 PF01985 CRS1 / YhbY (CRM) domain AYR67_03775 PF01728 FtsJ-like methyltransferase AYR67_03780 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_03780 PF01434 Peptidase family M41 AYR67_03780 PF06480 FtsH Extracellular AYR67_03785 PF00809 Pterin binding enzyme AYR67_03805 PF09423 PhoD-like phosphatase AYR67_03805 PF16655 AYR67_03805 AYR67_03820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYR67_03820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYR67_03825 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AYR67_03835 PF00083 Sugar (and other) transporter AYR67_03840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYR67_03840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYR67_03845 PF01266 FAD dependent oxidoreductase AYR67_03845 PF16901 AYR67_03845 AYR67_03850 PF00821 Phosphoenolpyruvate carboxykinase AYR67_03850 PF17297 AYR67_03850 AYR67_03855 PF00781 Diacylglycerol kinase catalytic domain AYR67_03860 PF00149 Calcineurin-like phosphoesterase AYR67_03865 PF12245 Bacterial Ig-like domain (group 3) AYR67_03870 PF00166 Chaperonin 10 Kd subunit AYR67_03875 PF00118 TCP-1/cpn60 chaperonin family AYR67_03880 PF01219 Prokaryotic diacylglycerol kinase AYR67_03885 PF00753 Metallo-beta-lactamase superfamily AYR67_03890 PF03009 Glycerophosphoryl diester phosphodiesterase family AYR67_03895 PF00873 AcrB/AcrD/AcrF family AYR67_03900 PF13430 AYR67_03900 AYR67_03905 PF01435 Peptidase family M48 AYR67_03910 PF01464 Transglycosylase SLT domain AYR67_03915 PF01171 PP-loop family AYR67_03920 PF02036 SCP-2 sterol transfer family AYR67_03925 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR67_03925 PF01464 Transglycosylase SLT domain AYR67_03930 PF01272 Transcription elongation factor, GreA/GreB, C-term AYR67_03930 PF03449 Transcription elongation factor, N-terminal AYR67_03940 PF14534 Domain of unknown function (DUF4440) AYR67_03945 PF00501 AMP-binding enzyme AYR67_03945 PF00550 Phosphopantetheine attachment site AYR67_03945 PF13193 AMP-binding enzyme C-terminal domain AYR67_03955 PF00440 Bacterial regulatory proteins, tetR family AYR67_03960 PF10118 AYR67_03960 AYR67_03965 PF00440 Bacterial regulatory proteins, tetR family AYR67_03970 PF00881 Nitroreductase family AYR67_03975 PF00106 short chain dehydrogenase AYR67_03980 PF00440 Bacterial regulatory proteins, tetR family AYR67_03985 PF02595 Glycerate kinase family AYR67_03990 PF00384 Molybdopterin oxidoreductase AYR67_03990 PF01568 Molydopterin dinucleotide binding domain AYR67_03995 PF02634 FdhD/NarQ family AYR67_04000 PF06803 AYR67_04000 AYR67_04005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR67_04005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR67_04005 PF11890 Domain of unknown function (DUF3410) AYR67_04010 PF00152 tRNA synthetases class II (D, K and N) AYR67_04015 PF04280 Tim44-like domain AYR67_04020 PF06745 KaiC AYR67_04020 PF13541 Subunit ChlI of Mg-chelatase AYR67_04025 PF00324 Amino acid permease AYR67_04035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AYR67_04035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AYR67_04040 PF01678 Diaminopimelate epimerase AYR67_04045 PF01810 AYR67_04045 AYR67_04050 PF00589 Phage integrase family AYR67_04050 PF02899 Phage integrase, N-terminal SAM-like domain AYR67_04055 PF01012 Electron transfer flavoprotein domain AYR67_04060 PF00766 Electron transfer flavoprotein FAD-binding domain AYR67_04060 PF01012 Electron transfer flavoprotein domain AYR67_04065 PF00521 DNA gyrase/topoisomerase IV, subunit A AYR67_04065 PF03989 DNA gyrase C-terminal domain, beta-propeller AYR67_04070 PF13231 AYR67_04070 AYR67_04075 PF04138 AYR67_04075 AYR67_04080 PF00535 Glycosyl transferase family 2 AYR67_04085 PF04794 YdjC-like protein AYR67_04090 PF12698 ABC-2 family transporter protein AYR67_04095 PF12698 ABC-2 family transporter protein AYR67_04100 PF16576 AYR67_04100 AYR67_04105 PF02321 Outer membrane efflux protein AYR67_04110 PF00266 Aminotransferase class-V AYR67_04120 PF02639 AYR67_04120 AYR67_04125 PF00892 EamA-like transporter family AYR67_04130 PF02687 AYR67_04130 AYR67_04130 PF12704 MacB-like periplasmic core domain AYR67_04135 PF00005 ABC transporter AYR67_04140 PF00753 Metallo-beta-lactamase superfamily AYR67_04140 PF03772 AYR67_04140 AYR67_04140 PF13567 AYR67_04140 AYR67_04145 PF03279 AYR67_04145 AYR67_04150 PF01343 Peptidase family S49 AYR67_04155 PF12697 Alpha/beta hydrolase family AYR67_04160 PF00551 Formyl transferase AYR67_04165 PF00586 AIR synthase related protein, N-terminal domain AYR67_04165 PF02769 AIR synthase related protein, C-terminal domain AYR67_04170 PF01594 AYR67_04170 AYR67_04175 PF00308 Bacterial dnaA protein AYR67_04190 PF11304 AYR67_04190 AYR67_04200 PF04542 Sigma-70 region 2 AYR67_04200 PF08281 Sigma-70, region 4 AYR67_04205 PF00588 SpoU rRNA Methylase family AYR67_04210 PF00316 Fructose-1-6-bisphosphatase AYR67_04220 PF00691 OmpA family AYR67_04225 PF04052 TolB amino-terminal domain AYR67_04225 PF07676 WD40-like Beta Propeller Repeat AYR67_04230 PF13103 TonB C terminal AYR67_04235 PF02472 Biopolymer transport protein ExbD/TolR AYR67_04240 PF01618 AYR67_04240 AYR67_04245 PF03061 Thioesterase superfamily AYR67_04250 PF01546 Peptidase family M20/M25/M40 AYR67_04250 PF07687 Peptidase dimerisation domain AYR67_04255 PF05491 Holliday junction DNA helicase ruvB C-terminus AYR67_04255 PF05496 Holliday junction DNA helicase ruvB N-terminus AYR67_04260 PF01330 RuvA N terminal domain AYR67_04260 PF07499 RuvA, C-terminal domain AYR67_04260 PF14520 Helix-hairpin-helix domain AYR67_04265 PF01966 HD domain AYR67_04270 PF02769 AIR synthase related protein, C-terminal domain AYR67_04270 PF13507 CobB/CobQ-like glutamine amidotransferase domain AYR67_04275 PF07690 Major Facilitator Superfamily AYR67_04290 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_04295 PF01467 Cytidylyltransferase AYR67_04300 PF00188 Cysteine-rich secretory protein family AYR67_04305 PF00578 AhpC/TSA family AYR67_04310 PF01902 ATP-binding region AYR67_04320 PF06508 Queuosine biosynthesis protein QueC AYR67_04325 PF04055 Radical SAM superfamily AYR67_04325 PF13394 4Fe-4S single cluster domain AYR67_04330 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_04330 PF14602 Hexapeptide repeat of succinyl-transferase AYR67_04330 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AYR67_04340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_04340 PF03466 LysR substrate binding domain AYR67_04345 PF00005 ABC transporter AYR67_04345 PF12857 AYR67_04345 AYR67_04350 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_04355 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_04360 PF06821 Serine hydrolase AYR67_04365 PF13531 Bacterial extracellular solute-binding protein AYR67_04370 PF01063 Aminotransferase class IV AYR67_04375 PF02618 YceG-like family AYR67_04380 PF02223 Thymidylate kinase AYR67_04385 PF03061 Thioesterase superfamily AYR67_04390 PF00890 FAD binding domain AYR67_04390 PF02910 Fumarate reductase flavoprotein C-term AYR67_04395 PF13180 PDZ domain AYR67_04395 PF13365 Trypsin-like peptidase domain AYR67_04400 PF13279 Thioesterase-like superfamily AYR67_04405 PF00009 Elongation factor Tu GTP binding domain AYR67_04405 PF00679 Elongation factor G C-terminus AYR67_04405 PF03144 Elongation factor Tu domain 2 AYR67_04405 PF06421 GTP-binding protein LepA C-terminus AYR67_04410 PF00717 Peptidase S24-like AYR67_04410 PF10502 Signal peptidase, peptidase S26 AYR67_04415 PF16137 AYR67_04415 AYR67_04420 PF00035 Double-stranded RNA binding motif AYR67_04420 PF14622 Ribonuclease-III-like AYR67_04425 PF01926 50S ribosome-binding GTPase AYR67_04425 PF07650 KH domain AYR67_04435 PF02565 Recombination protein O C terminal AYR67_04435 PF11967 Recombination protein O N terminal AYR67_04440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AYR67_04445 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AYR67_04450 PF00106 short chain dehydrogenase AYR67_04465 PF03061 Thioesterase superfamily AYR67_04470 PF04828 Glutathione-dependent formaldehyde-activating enzyme AYR67_04475 PF00155 Aminotransferase class I and II AYR67_04485 PF00990 GGDEF domain AYR67_04485 PF13188 PAS domain AYR67_04495 PF00271 Helicase conserved C-terminal domain AYR67_04495 PF02151 UvrB/uvrC motif AYR67_04495 PF04851 Type III restriction enzyme, res subunit AYR67_04495 PF12344 Ultra-violet resistance protein B AYR67_04500 PF08212 Lipocalin-like domain AYR67_04505 PF00892 EamA-like transporter family AYR67_04510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR67_04510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYR67_04525 PF01018 GTP1/OBG AYR67_04525 PF01926 50S ribosome-binding GTPase AYR67_04530 PF00696 Amino acid kinase family AYR67_04530 PF01472 PUA domain AYR67_04535 PF12710 haloacid dehalogenase-like hydrolase AYR67_04540 PF07759 AYR67_04540 AYR67_04545 PF01207 Dihydrouridine synthase (Dus) AYR67_04550 PF03060 Nitronate monooxygenase AYR67_04555 PF01988 AYR67_04555 AYR67_04565 PF02350 UDP-N-acetylglucosamine 2-epimerase AYR67_04580 PF13641 Glycosyltransferase like family 2 AYR67_04595 PF00875 DNA photolyase AYR67_04595 PF03441 FAD binding domain of DNA photolyase AYR67_04600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR67_04605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_04610 PF00768 D-alanyl-D-alanine carboxypeptidase AYR67_04615 PF05299 M61 glycyl aminopeptidase AYR67_04620 PF03971 Monomeric isocitrate dehydrogenase AYR67_04625 PF00849 RNA pseudouridylate synthase AYR67_04630 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR67_04645 PF06779 AYR67_04645 AYR67_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_04650 PF03466 LysR substrate binding domain AYR67_04655 PF00375 Sodium:dicarboxylate symporter family AYR67_04660 PF02567 Phenazine biosynthesis-like protein AYR67_04665 PF00675 Insulinase (Peptidase family M16) AYR67_04665 PF05193 Peptidase M16 inactive domain AYR67_04670 PF11342 Protein of unknown function (DUF3144) AYR67_04680 PF01928 CYTH domain AYR67_04680 PF05235 CHAD domain AYR67_04685 PF06127 AYR67_04685 AYR67_04690 PF02581 Thiamine monophosphate synthase/TENI AYR67_04695 PF00202 Aminotransferase class-III AYR67_04705 PF00849 RNA pseudouridylate synthase AYR67_04710 PF00176 SNF2 family N-terminal domain AYR67_04710 PF00271 Helicase conserved C-terminal domain AYR67_04710 PF12137 RNA polymerase recycling family C-terminal AYR67_04715 PF01594 AYR67_04715 AYR67_04720 PF00440 Bacterial regulatory proteins, tetR family AYR67_04725 PF00175 Oxidoreductase NAD-binding domain AYR67_04725 PF00970 Oxidoreductase FAD-binding domain AYR67_04730 PF00487 AYR67_04730 AYR67_04735 PF14539 Domain of unknown function (DUF4442) AYR67_04740 PF00440 Bacterial regulatory proteins, tetR family AYR67_04745 PF04402 Protein of unknown function (DUF541) AYR67_04750 PF00202 Aminotransferase class-III AYR67_04755 PF00282 Pyridoxal-dependent decarboxylase conserved domain AYR67_04760 PF00171 Aldehyde dehydrogenase family AYR67_04765 PF01037 AsnC family AYR67_04765 PF13404 AsnC-type helix-turn-helix domain AYR67_04770 PF00205 Thiamine pyrophosphate enzyme, central domain AYR67_04770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR67_04770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR67_04775 PF00324 Amino acid permease AYR67_04780 PF12849 PBP superfamily domain AYR67_04785 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_04785 PF12501 AYR67_04785 AYR67_04790 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_04790 PF11812 AYR67_04790 AYR67_04795 PF00005 ABC transporter AYR67_04800 PF01343 Peptidase family S49 AYR67_04800 PF08496 AYR67_04800 AYR67_04810 PF00872 AYR67_04810 AYR67_04815 PF09997 AYR67_04815 AYR67_04820 PF00206 Lyase AYR67_04820 PF08328 Adenylosuccinate lyase C-terminal AYR67_04825 PF04356 Protein of unknown function (DUF489) AYR67_04830 PF03054 tRNA methyl transferase AYR67_04835 PF00293 NUDIX domain AYR67_04840 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_04845 PF00768 D-alanyl-D-alanine carboxypeptidase AYR67_04845 PF07943 Penicillin-binding protein 5, C-terminal domain AYR67_04860 PF01975 Survival protein SurE AYR67_04865 PF01476 LysM domain AYR67_04865 PF01551 Peptidase family M23 AYR67_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_04870 PF03466 LysR substrate binding domain AYR67_04875 PF05362 Lon protease (S16) C-terminal proteolytic domain AYR67_04875 PF13654 AAA domain AYR67_04880 PF07690 Major Facilitator Superfamily AYR67_04885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR67_04890 PF13593 SBF-like CPA transporter family (DUF4137) AYR67_04895 PF01197 Ribosomal protein L31 AYR67_04900 PF00563 EAL domain AYR67_04910 PF04055 Radical SAM superfamily AYR67_04910 PF13394 4Fe-4S single cluster domain AYR67_04915 PF01132 Elongation factor P (EF-P) OB domain AYR67_04915 PF08207 Elongation factor P (EF-P) KOW-like domain AYR67_04915 PF09285 Elongation factor P, C-terminal AYR67_04920 PF02554 AYR67_04920 AYR67_04920 PF13722 AYR67_04920 AYR67_04925 PF04328 AYR67_04925 AYR67_04945 PF03374 AYR67_04945 AYR67_04950 PF00440 Bacterial regulatory proteins, tetR family AYR67_04955 PF07905 AYR67_04955 AYR67_04955 PF13556 PucR C-terminal helix-turn-helix domain AYR67_04960 PF01266 FAD dependent oxidoreductase AYR67_04965 PF05899 Protein of unknown function (DUF861) AYR67_04970 PF00171 Aldehyde dehydrogenase family AYR67_04975 PF00324 Amino acid permease AYR67_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_04980 PF03466 LysR substrate binding domain AYR67_04985 PF02028 BCCT family transporter AYR67_04990 PF02028 BCCT family transporter AYR67_04995 PF00355 Rieske [2Fe-2S] domain AYR67_04995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR67_05000 PF00171 Aldehyde dehydrogenase family AYR67_05005 PF00301 Rubredoxin AYR67_05005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_05010 PF01266 FAD dependent oxidoreductase AYR67_05015 PF06249 Ethanolamine utilisation protein EutQ AYR67_05025 PF01914 AYR67_05025 AYR67_05030 PF00892 EamA-like transporter family AYR67_05035 PF00892 EamA-like transporter family AYR67_05040 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AYR67_05045 PF00083 Sugar (and other) transporter AYR67_05050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AYR67_05050 PF13378 Enolase C-terminal domain-like AYR67_05055 PF00107 Zinc-binding dehydrogenase AYR67_05055 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_05060 PF00440 Bacterial regulatory proteins, tetR family AYR67_05065 PF00440 Bacterial regulatory proteins, tetR family AYR67_05070 PF00440 Bacterial regulatory proteins, tetR family AYR67_05075 PF02678 Pirin AYR67_05085 PF08348 AYR67_05085 AYR67_05085 PF13309 AYR67_05085 AYR67_05090 PF04954 Siderophore-interacting protein AYR67_05090 PF08021 Siderophore-interacting FAD-binding domain AYR67_05095 PF00501 AMP-binding enzyme AYR67_05095 PF13193 AMP-binding enzyme C-terminal domain AYR67_05100 PF00550 Phosphopantetheine attachment site AYR67_05100 PF00668 Condensation domain AYR67_05105 PF01032 FecCD transport family AYR67_05110 PF01032 FecCD transport family AYR67_05115 PF00005 ABC transporter AYR67_05120 PF01497 Periplasmic binding protein AYR67_05125 PF00593 TonB dependent receptor AYR67_05125 PF07715 TonB-dependent Receptor Plug Domain AYR67_05130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AYR67_05135 PF00668 Condensation domain AYR67_05140 PF00501 AMP-binding enzyme AYR67_05140 PF13193 AMP-binding enzyme C-terminal domain AYR67_05145 PF00550 Phosphopantetheine attachment site AYR67_05145 PF00857 Isochorismatase family AYR67_05150 PF00282 Pyridoxal-dependent decarboxylase conserved domain AYR67_05160 PF00005 ABC transporter AYR67_05160 PF00664 ABC transporter transmembrane region AYR67_05165 PF00005 ABC transporter AYR67_05165 PF00664 ABC transporter transmembrane region AYR67_05170 PF00975 Thioesterase domain AYR67_05175 PF01648 4'-phosphopantetheinyl transferase superfamily AYR67_05180 PF00425 chorismate binding enzyme AYR67_05185 PF01471 Putative peptidoglycan binding domain AYR67_05185 PF03734 L,D-transpeptidase catalytic domain AYR67_05190 PF01208 Uroporphyrinogen decarboxylase (URO-D) AYR67_05195 PF05675 AYR67_05195 AYR67_05200 PF11220 AYR67_05200 AYR67_05205 PF13387 AYR67_05205 AYR67_05210 PF00144 Beta-lactamase AYR67_05215 PF01609 Transposase DDE domain AYR67_05220 PF01609 Transposase DDE domain AYR67_05225 PF01227 GTP cyclohydrolase I AYR67_05230 PF00941 FAD binding domain in molybdopterin dehydrogenase AYR67_05230 PF01799 [2Fe-2S] binding domain AYR67_05230 PF03450 CO dehydrogenase flavoprotein C-terminal domain AYR67_05235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AYR67_05235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AYR67_05240 PF02625 XdhC and CoxI family AYR67_05240 PF13478 XdhC Rossmann domain AYR67_05245 PF01713 Smr domain AYR67_05250 PF00218 Indole-3-glycerol phosphate synthase AYR67_05255 PF00591 Glycosyl transferase family, a/b domain AYR67_05255 PF02885 Glycosyl transferase family, helical bundle domain AYR67_05260 PF00593 TonB dependent receptor AYR67_05260 PF07715 TonB-dependent Receptor Plug Domain AYR67_05265 PF01433 Peptidase family M1 AYR67_05265 PF11838 ERAP1-like C-terminal domain AYR67_05270 PF00117 Glutamine amidotransferase class-I AYR67_05275 PF00557 Metallopeptidase family M24 AYR67_05275 PF01321 Creatinase/Prolidase N-terminal domain AYR67_05275 PF16188 AYR67_05275 AYR67_05275 PF16189 AYR67_05275 AYR67_05280 PF00854 POT family AYR67_05285 PF00120 Glutamine synthetase, catalytic domain AYR67_05285 PF03951 Glutamine synthetase, beta-Grasp domain AYR67_05290 PF04345 Chorismate lyase AYR67_05295 PF01040 UbiA prenyltransferase family AYR67_05300 PF03583 Secretory lipase AYR67_05310 PF10881 AYR67_05310 AYR67_05330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYR67_05330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYR67_05335 PF01784 NIF3 (NGG1p interacting factor 3) AYR67_05340 PF13180 PDZ domain AYR67_05340 PF13365 Trypsin-like peptidase domain AYR67_05345 PF01743 Poly A polymerase head domain AYR67_05345 PF12627 Probable RNA and SrmB- binding site of polymerase A AYR67_05350 PF00390 Malic enzyme, N-terminal domain AYR67_05350 PF01515 Phosphate acetyl/butaryl transferase AYR67_05350 PF03949 Malic enzyme, NAD binding domain AYR67_05355 PF00563 EAL domain AYR67_05355 PF00989 PAS fold AYR67_05355 PF00990 GGDEF domain AYR67_05355 PF08447 PAS fold AYR67_05360 PF04452 RNA methyltransferase AYR67_05365 PF02219 Methylenetetrahydrofolate reductase AYR67_05370 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AYR67_05370 PF05221 S-adenosyl-L-homocysteine hydrolase AYR67_05375 PF03412 Peptidase C39 family AYR67_05380 PF02627 Carboxymuconolactone decarboxylase family AYR67_05385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_05385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_05385 PF09317 AYR67_05385 AYR67_05390 PF04055 Radical SAM superfamily AYR67_05390 PF16881 AYR67_05390 AYR67_05395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR67_05395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_05405 PF07690 Major Facilitator Superfamily AYR67_05410 PF07690 Major Facilitator Superfamily AYR67_05415 PF03922 OmpW family AYR67_05420 PF00557 Metallopeptidase family M24 AYR67_05425 PF00318 Ribosomal protein S2 AYR67_05430 PF00889 Elongation factor TS AYR67_05435 PF11948 AYR67_05435 AYR67_05440 PF02311 AraC-like ligand binding domain AYR67_05440 PF12833 Helix-turn-helix domain AYR67_05445 PF03591 AYR67_05445 AYR67_05450 PF05437 AYR67_05450 AYR67_05455 PF06127 AYR67_05455 AYR67_05460 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AYR67_05465 PF13406 Transglycosylase SLT domain AYR67_05470 PF01098 AYR67_05470 AYR67_05480 PF14489 QueF-like protein AYR67_05480 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AYR67_05485 PF01061 AYR67_05485 AYR67_05490 PF00005 ABC transporter AYR67_05505 PF12843 AYR67_05505 AYR67_05510 PF03583 Secretory lipase AYR67_05515 PF05117 AYR67_05515 AYR67_05515 PF06877 Regulator of ribonuclease activity B AYR67_05520 PF00464 Serine hydroxymethyltransferase AYR67_05525 PF02321 Outer membrane efflux protein AYR67_05530 PF00873 AcrB/AcrD/AcrF family AYR67_05535 PF16576 AYR67_05535 AYR67_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_05540 PF03466 LysR substrate binding domain AYR67_05545 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR67_05550 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_05555 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_05560 PF00005 ABC transporter AYR67_05565 PF00893 Small Multidrug Resistance protein AYR67_05575 PF01136 AYR67_05575 AYR67_05575 PF16325 AYR67_05575 AYR67_05580 PF00155 Aminotransferase class I and II AYR67_05580 PF00392 Bacterial regulatory proteins, gntR family AYR67_05585 PF02567 Phenazine biosynthesis-like protein AYR67_05590 PF00175 Oxidoreductase NAD-binding domain AYR67_05590 PF00970 Oxidoreductase FAD-binding domain AYR67_05595 PF01980 Uncharacterised protein family UPF0066 AYR67_05600 PF02308 AYR67_05600 AYR67_05600 PF13194 AYR67_05600 AYR67_05605 PF00437 Type II/IV secretion system protein AYR67_05605 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AYR67_05610 PF04076 Bacterial OB fold (BOF) protein AYR67_05615 PF00072 Response regulator receiver domain AYR67_05615 PF00486 Transcriptional regulatory protein, C terminal AYR67_05620 PF00512 His Kinase A (phospho-acceptor) domain AYR67_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_05625 PF10636 Hemin uptake protein hemP AYR67_05630 PF00293 NUDIX domain AYR67_05630 PF02581 Thiamine monophosphate synthase/TENI AYR67_05640 PF00905 Penicillin binding protein transpeptidase domain AYR67_05640 PF00912 Transglycosylase AYR67_05640 PF14814 Bifunctional transglycosylase second domain AYR67_05645 PF01513 ATP-NAD kinase AYR67_05650 PF07023 AYR67_05650 AYR67_05655 PF00591 Glycosyl transferase family, a/b domain AYR67_05655 PF02885 Glycosyl transferase family, helical bundle domain AYR67_05660 PF00375 Sodium:dicarboxylate symporter family AYR67_05665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_05665 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_05665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_05670 PF00756 Putative esterase AYR67_05675 PF00800 Prephenate dehydratase AYR67_05675 PF01817 Chorismate mutase type II AYR67_05675 PF01842 ACT domain AYR67_05680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR67_05680 PF02153 Prephenate dehydrogenase AYR67_05690 PF01546 Peptidase family M20/M25/M40 AYR67_05690 PF07687 Peptidase dimerisation domain AYR67_05695 PF00753 Metallo-beta-lactamase superfamily AYR67_05705 PF03883 AYR67_05705 AYR67_05715 PF05690 Thiazole biosynthesis protein ThiG AYR67_05720 PF02597 ThiS family AYR67_05725 PF04241 AYR67_05725 AYR67_05730 PF00140 Sigma-70 factor, region 1 AYR67_05730 PF04542 Sigma-70 region 2 AYR67_05730 PF04545 Sigma-70, region 4 AYR67_05735 PF01206 Sulfurtransferase TusA AYR67_05740 PF00313 'Cold-shock' DNA-binding domain AYR67_05745 PF00270 DEAD/DEAH box helicase AYR67_05745 PF00271 Helicase conserved C-terminal domain AYR67_05755 PF00881 Nitroreductase family AYR67_05760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYR67_05760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYR67_05765 PF00300 Histidine phosphatase superfamily (branch 1) AYR67_05770 PF05134 Type II secretion system (T2SS), protein L AYR67_05770 PF12693 GspL periplasmic domain AYR67_05775 PF04612 Type II secretion system (T2SS), protein M AYR67_05780 PF01180 Dihydroorotate dehydrogenase AYR67_05785 PF02674 AYR67_05785 AYR67_05790 PF00156 Phosphoribosyl transferase domain AYR67_05790 PF13522 Glutamine amidotransferase domain AYR67_05795 PF01435 Peptidase family M48 AYR67_05805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR67_05805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR67_05810 PF01435 Peptidase family M48 AYR67_05815 PF09424 Yqey-like protein AYR67_05820 PF01165 Ribosomal protein S21 AYR67_05825 PF00814 Glycoprotease family AYR67_05835 PF05673 Protein of unknown function (DUF815) AYR67_05840 PF01734 Patatin-like phospholipase AYR67_05840 PF11815 AYR67_05840 AYR67_05845 PF00069 Protein kinase domain AYR67_05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_05870 PF03466 LysR substrate binding domain AYR67_05875 PF00202 Aminotransferase class-III AYR67_05880 PF00171 Aldehyde dehydrogenase family AYR67_05885 PF00324 Amino acid permease AYR67_05890 PF09939 AYR67_05890 AYR67_05900 PF02585 GlcNAc-PI de-N-acetylase AYR67_05905 PF05401 Nodulation protein S (NodS) AYR67_05910 PF00535 Glycosyl transferase family 2 AYR67_05915 PF04076 Bacterial OB fold (BOF) protein AYR67_05920 PF04940 Sensors of blue-light using FAD AYR67_05930 PF01810 AYR67_05930 AYR67_05935 PF02311 AraC-like ligand binding domain AYR67_05935 PF12833 Helix-turn-helix domain AYR67_05940 PF00561 alpha/beta hydrolase fold AYR67_05945 PF03616 AYR67_05945 AYR67_05950 PF05673 Protein of unknown function (DUF815) AYR67_05955 PF00392 Bacterial regulatory proteins, gntR family AYR67_05955 PF07729 FCD domain AYR67_05965 PF00440 Bacterial regulatory proteins, tetR family AYR67_05970 PF05229 AYR67_05970 AYR67_05975 PF05229 AYR67_05975 AYR67_05980 PF05229 AYR67_05980 AYR67_05985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYR67_05990 PF00577 Outer membrane usher protein AYR67_05990 PF13953 PapC C-terminal domain AYR67_05995 PF05229 AYR67_05995 AYR67_06005 PF00083 Sugar (and other) transporter AYR67_06005 PF08946 Osmosensory transporter coiled coil AYR67_06015 PF00440 Bacterial regulatory proteins, tetR family AYR67_06020 PF00892 EamA-like transporter family AYR67_06025 PF00155 Aminotransferase class I and II AYR67_06030 PF02080 TrkA-C domain AYR67_06030 PF06826 AYR67_06030 AYR67_06035 PF04403 AYR67_06035 AYR67_06040 PF04403 AYR67_06040 AYR67_06045 PF02470 AYR67_06045 AYR67_06050 PF03886 Protein of unknown function (DUF330) AYR67_06060 PF13610 AYR67_06060 AYR67_06065 PF07690 Major Facilitator Superfamily AYR67_06070 PF00440 Bacterial regulatory proteins, tetR family AYR67_06070 PF16859 AYR67_06070 AYR67_06075 PF00375 Sodium:dicarboxylate symporter family AYR67_06085 PF00753 Metallo-beta-lactamase superfamily AYR67_06085 PF16123 AYR67_06085 AYR67_06090 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_06095 PF00005 ABC transporter AYR67_06095 PF09383 NIL domain AYR67_06100 PF03180 NLPA lipoprotein AYR67_06105 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AYR67_06105 PF02843 Phosphoribosylglycinamide synthetase, C domain AYR67_06105 PF02844 Phosphoribosylglycinamide synthetase, N domain AYR67_06110 PF01808 AICARFT/IMPCHase bienzyme AYR67_06110 PF02142 MGS-like domain AYR67_06115 PF02954 Bacterial regulatory protein, Fis family AYR67_06120 PF11906 AYR67_06120 AYR67_06125 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AYR67_06135 PF01134 Glucose inhibited division protein A AYR67_06135 PF13932 GidA associated domain 3 AYR67_06140 PF13280 AYR67_06140 AYR67_06145 PF14403 AYR67_06145 AYR67_06150 PF04168 AYR67_06150 AYR67_06155 PF01841 Transglutaminase-like superfamily AYR67_06155 PF08379 AYR67_06155 AYR67_06160 PF00227 Proteasome subunit AYR67_06165 PF00842 Alanine racemase, C-terminal domain AYR67_06165 PF01168 Alanine racemase, N-terminal domain AYR67_06170 PF00772 DnaB-like helicase N terminal domain AYR67_06170 PF03796 DnaB-like helicase C terminal domain AYR67_06175 PF01281 Ribosomal protein L9, N-terminal domain AYR67_06175 PF03948 Ribosomal protein L9, C-terminal domain AYR67_06180 PF01084 Ribosomal protein S18 AYR67_06185 PF01250 Ribosomal protein S6 AYR67_06190 PF01040 UbiA prenyltransferase family AYR67_06195 PF03626 AYR67_06195 AYR67_06200 PF00510 Cytochrome c oxidase subunit III AYR67_06205 PF00115 Cytochrome C and Quinol oxidase polypeptide I AYR67_06210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AYR67_06210 PF06481 COX Aromatic Rich Motif AYR67_06215 PF06271 AYR67_06215 AYR67_06215 PF14237 AYR67_06215 AYR67_06220 PF00391 PEP-utilising enzyme, mobile domain AYR67_06220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AYR67_06220 PF02896 PEP-utilising enzyme, TIM barrel domain AYR67_06225 PF03618 AYR67_06225 AYR67_06235 PF01522 Polysaccharide deacetylase AYR67_06235 PF14883 Hypothetical glycosyl hydrolase family 13 AYR67_06240 PF13641 Glycosyltransferase like family 2 AYR67_06245 PF13994 AYR67_06245 AYR67_06255 PF00296 Luciferase-like monooxygenase AYR67_06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_06270 PF03466 LysR substrate binding domain AYR67_06275 PF17124 AYR67_06275 AYR67_06280 PF00472 RF-1 domain AYR67_06280 PF03462 PCRF domain AYR67_06285 PF05175 Methyltransferase small domain AYR67_06290 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_06295 PF09084 NMT1/THI5 like AYR67_06300 PF12625 AYR67_06300 AYR67_06300 PF12833 Helix-turn-helix domain AYR67_06305 PF00106 short chain dehydrogenase AYR67_06310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_06310 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_06310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_06315 PF00501 AMP-binding enzyme AYR67_06315 PF13193 AMP-binding enzyme C-terminal domain AYR67_06320 PF01613 Flavin reductase like domain AYR67_06325 PF00899 ThiF family AYR67_06330 PF03109 AYR67_06330 AYR67_06335 PF02152 Dihydroneopterin aldolase AYR67_06340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYR67_06345 PF03814 AYR67_06345 AYR67_06350 PF00122 E1-E2 ATPase AYR67_06350 PF00702 haloacid dehalogenase-like hydrolase AYR67_06355 PF02669 AYR67_06355 AYR67_06360 PF00512 His Kinase A (phospho-acceptor) domain AYR67_06360 PF00582 Universal stress protein family AYR67_06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_06360 PF02702 Osmosensitive K+ channel His kinase sensor domain AYR67_06360 PF13493 Domain of unknown function (DUF4118) AYR67_06365 PF00072 Response regulator receiver domain AYR67_06365 PF00486 Transcriptional regulatory protein, C terminal AYR67_06370 PF00120 Glutamine synthetase, catalytic domain AYR67_06375 PF10973 AYR67_06375 AYR67_06380 PF03232 AYR67_06380 AYR67_06385 PF07690 Major Facilitator Superfamily AYR67_06390 PF01103 Surface antigen AYR67_06390 PF07244 Surface antigen variable number repeat AYR67_06390 PF17243 AYR67_06390 AYR67_06395 PF04357 AYR67_06395 AYR67_06405 PF00330 Aconitase family (aconitate hydratase) AYR67_06405 PF06434 Aconitate hydratase 2 N-terminus AYR67_06405 PF11791 Aconitate B N-terminal domain AYR67_06415 PF00520 Ion transport protein AYR67_06420 PF07690 Major Facilitator Superfamily AYR67_06430 PF10670 AYR67_06430 AYR67_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_06435 PF03466 LysR substrate binding domain AYR67_06440 PF04284 AYR67_06440 AYR67_06450 PF00849 RNA pseudouridylate synthase AYR67_06450 PF01479 S4 domain AYR67_06455 PF00583 Acetyltransferase (GNAT) family AYR67_06460 PF04221 RelB antitoxin AYR67_06465 PF00849 RNA pseudouridylate synthase AYR67_06470 PF02367 Uncharacterised P-loop hydrolase UPF0079 AYR67_06475 PF01119 DNA mismatch repair protein, C-terminal domain AYR67_06475 PF08676 MutL C terminal dimerisation domain AYR67_06475 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_06480 PF01715 IPP transferase AYR67_06485 PF17209 AYR67_06485 AYR67_06490 PF00892 EamA-like transporter family AYR67_06495 PF00881 Nitroreductase family AYR67_06505 PF00149 Calcineurin-like phosphoesterase AYR67_06510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYR67_06515 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR67_06515 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AYR67_06520 PF00117 Glutamine amidotransferase class-I AYR67_06525 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AYR67_06530 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AYR67_06535 PF13520 Amino acid permease AYR67_06540 PF00171 Aldehyde dehydrogenase family AYR67_06550 PF12146 Putative lysophospholipase AYR67_06555 PF00465 Iron-containing alcohol dehydrogenase AYR67_06560 PF05970 AYR67_06560 AYR67_06560 PF14493 AYR67_06560 AYR67_06565 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AYR67_06570 PF06445 GyrI-like small molecule binding domain AYR67_06570 PF12833 Helix-turn-helix domain AYR67_06575 PF02110 Hydroxyethylthiazole kinase family AYR67_06590 PF01433 Peptidase family M1 AYR67_06590 PF11940 Domain of unknown function (DUF3458) AYR67_06590 PF17432 AYR67_06590 AYR67_06595 PF13417 Glutathione S-transferase, N-terminal domain AYR67_06595 PF14497 Glutathione S-transferase, C-terminal domain AYR67_06605 PF01609 Transposase DDE domain AYR67_06610 PF01609 Transposase DDE domain AYR67_06620 PF00106 short chain dehydrogenase AYR67_06625 PF01817 Chorismate mutase type II AYR67_06630 PF01037 AsnC family AYR67_06630 PF13412 Winged helix-turn-helix DNA-binding AYR67_06640 PF00440 Bacterial regulatory proteins, tetR family AYR67_06645 PF00593 TonB dependent receptor AYR67_06645 PF07715 TonB-dependent Receptor Plug Domain AYR67_06650 PF00924 Mechanosensitive ion channel AYR67_06675 PF13527 Acetyltransferase (GNAT) domain AYR67_06680 PF01609 Transposase DDE domain AYR67_06685 PF01609 Transposase DDE domain AYR67_06690 PF00593 TonB dependent receptor AYR67_06690 PF07715 TonB-dependent Receptor Plug Domain AYR67_06695 PF03922 OmpW family AYR67_06710 PF00005 ABC transporter AYR67_06715 PF00582 Universal stress protein family AYR67_06730 PF06271 AYR67_06730 AYR67_06735 PF00122 E1-E2 ATPase AYR67_06735 PF00690 Cation transporter/ATPase, N-terminus AYR67_06735 PF00702 haloacid dehalogenase-like hydrolase AYR67_06740 PF02308 AYR67_06740 AYR67_06745 PF03594 AYR67_06745 AYR67_06750 PF01037 AsnC family AYR67_06750 PF13412 Winged helix-turn-helix DNA-binding AYR67_06755 PF01810 AYR67_06755 AYR67_06760 PF00923 Transaldolase AYR67_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_06765 PF03466 LysR substrate binding domain AYR67_06770 PF05232 AYR67_06770 AYR67_06775 PF00108 Thiolase, N-terminal domain AYR67_06775 PF02803 Thiolase, C-terminal domain AYR67_06780 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_06785 PF01575 MaoC like domain AYR67_06790 PF00144 Beta-lactamase AYR67_06795 PF00440 Bacterial regulatory proteins, tetR family AYR67_06800 PF07690 Major Facilitator Superfamily AYR67_06805 PF12169 DNA polymerase III subunits gamma and tau domain III AYR67_06805 PF13177 DNA polymerase III, delta subunit AYR67_06810 PF04185 Phosphoesterase family AYR67_06810 PF05506 AYR67_06810 AYR67_06815 PF13279 Thioesterase-like superfamily AYR67_06820 PF00465 Iron-containing alcohol dehydrogenase AYR67_06825 PF10282 Lactonase, 7-bladed beta-propeller AYR67_06830 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYR67_06835 PF01565 FAD binding domain AYR67_06835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AYR67_06840 PF02698 DUF218 domain AYR67_06845 PF12146 Putative lysophospholipase AYR67_06850 PF01645 Conserved region in glutamate synthase AYR67_06855 PF03929 AYR67_06855 AYR67_06860 PF00440 Bacterial regulatory proteins, tetR family AYR67_06865 PF14518 Iron-containing redox enzyme AYR67_06870 PF00589 Phage integrase family AYR67_06870 PF13356 Domain of unknown function (DUF4102) AYR67_06905 PF13479 AYR67_06905 AYR67_06935 PF00717 Peptidase S24-like AYR67_06935 PF01381 Helix-turn-helix AYR67_06940 PF14549 DNA-binding transcriptional regulator Cro AYR67_06955 PF01555 DNA methylase AYR67_06960 PF07120 AYR67_06960 AYR67_06985 PF04480 Protein of unknown function (DUF559) AYR67_07005 PF05866 Endodeoxyribonuclease RusA AYR67_07010 PF12844 Helix-turn-helix domain AYR67_07035 PF07007 Protein of unknown function (DUF1311) AYR67_07045 PF13737 AYR67_07045 AYR67_07100 PF01258 Prokaryotic dksA/traR C4-type zinc finger AYR67_07115 PF12571 AYR67_07115 AYR67_07170 PF10547 AYR67_07170 AYR67_07180 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AYR67_07185 PF05016 Plasmid stabilisation system protein AYR67_07205 PF02018 Carbohydrate binding domain AYR67_07205 PF09327 AYR67_07205 AYR67_07205 PF15711 AYR67_07205 AYR67_07250 PF06114 Domain of unknown function (DUF955) AYR67_07260 PF10547 AYR67_07260 AYR67_07285 PF16082 AYR67_07285 AYR67_07330 PF03869 Arc-like DNA binding domain AYR67_07335 PF02498 AYR67_07335 AYR67_07340 PF05838 Glycosyl hydrolase 108 AYR67_07340 PF09374 Predicted Peptidoglycan domain AYR67_07360 PF00665 Integrase core domain AYR67_07365 PF01527 Transposase AYR67_07370 PF12832 MFS_1 like family AYR67_07380 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AYR67_07380 PF02785 Biotin carboxylase C-terminal domain AYR67_07380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR67_07385 PF00364 Biotin-requiring enzyme AYR67_07390 PF01220 Dehydroquinase class II AYR67_07395 PF00817 impB/mucB/samB family AYR67_07395 PF11799 impB/mucB/samB family C-terminal domain AYR67_07395 PF13438 AYR67_07395 AYR67_07400 PF13379 NMT1-like family AYR67_07405 PF00072 Response regulator receiver domain AYR67_07405 PF03861 ANTAR domain AYR67_07415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYR67_07415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYR67_07415 PF04324 BFD-like [2Fe-2S] binding domain AYR67_07415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_07420 PF13806 Rieske-like [2Fe-2S] domain AYR67_07425 PF00384 Molybdopterin oxidoreductase AYR67_07425 PF01568 Molydopterin dinucleotide binding domain AYR67_07425 PF04324 BFD-like [2Fe-2S] binding domain AYR67_07425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYR67_07430 PF12804 MobA-like NTP transferase domain AYR67_07435 PF00384 Molybdopterin oxidoreductase AYR67_07435 PF01568 Molydopterin dinucleotide binding domain AYR67_07435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYR67_07440 PF04055 Radical SAM superfamily AYR67_07440 PF06463 Molybdenum Cofactor Synthesis C AYR67_07440 PF13353 4Fe-4S single cluster domain AYR67_07445 PF02597 ThiS family AYR67_07450 PF02391 MoaE protein AYR67_07455 PF00994 Probable molybdopterin binding domain AYR67_07455 PF01967 MoaC family AYR67_07460 PF00994 Probable molybdopterin binding domain AYR67_07460 PF03453 MoeA N-terminal region (domain I and II) AYR67_07460 PF03454 MoeA C-terminal region (domain IV) AYR67_07465 PF01638 HxlR-like helix-turn-helix AYR67_07470 PF00155 Aminotransferase class I and II AYR67_07470 PF00392 Bacterial regulatory proteins, gntR family AYR67_07475 PF00892 EamA-like transporter family AYR67_07480 PF04358 DsrC like protein AYR67_07495 PF02635 DsrE/DsrF-like family AYR67_07500 PF01370 NAD dependent epimerase/dehydratase family AYR67_07505 PF00206 Lyase AYR67_07505 PF10415 Fumarase C C-terminus AYR67_07515 PF01636 Phosphotransferase enzyme family AYR67_07520 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AYR67_07530 PF04986 AYR67_07530 AYR67_07530 PF14319 AYR67_07530 AYR67_07540 PF00440 Bacterial regulatory proteins, tetR family AYR67_07540 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AYR67_07585 PF01609 Transposase DDE domain AYR67_07590 PF01609 Transposase DDE domain AYR67_07595 PF00916 AYR67_07595 AYR67_07595 PF01740 STAS domain AYR67_07600 PF00582 Universal stress protein family AYR67_07620 PF06527 AYR67_07620 AYR67_07625 PF05621 AYR67_07625 AYR67_07630 PF00665 Integrase core domain AYR67_07630 PF09299 Mu transposase, C-terminal AYR67_07635 PF08721 TnsA endonuclease C terminal AYR67_07635 PF08722 TnsA endonuclease N terminal AYR67_07655 PF01266 FAD dependent oxidoreductase AYR67_07665 PF02542 YgbB family AYR67_07675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYR67_07675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYR67_07680 PF00440 Bacterial regulatory proteins, tetR family AYR67_07685 PF00072 Response regulator receiver domain AYR67_07685 PF00158 Sigma-54 interaction domain AYR67_07685 PF02954 Bacterial regulatory protein, Fis family AYR67_07690 PF00512 His Kinase A (phospho-acceptor) domain AYR67_07690 PF00989 PAS fold AYR67_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_07695 PF00919 Uncharacterized protein family UPF0004 AYR67_07695 PF04055 Radical SAM superfamily AYR67_07700 PF00696 Amino acid kinase family AYR67_07705 PF01765 Ribosome recycling factor AYR67_07710 PF01255 Putative undecaprenyl diphosphate synthase AYR67_07715 PF01148 Cytidylyltransferase family AYR67_07720 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AYR67_07720 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AYR67_07720 PF13288 DXP reductoisomerase C-terminal domain AYR67_07725 PF02163 Peptidase family M50 AYR67_07725 PF13180 PDZ domain AYR67_07730 PF01103 Surface antigen AYR67_07730 PF07244 Surface antigen variable number repeat AYR67_07735 PF03938 Outer membrane protein (OmpH-like) AYR67_07740 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_07740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AYR67_07740 PF14602 Hexapeptide repeat of succinyl-transferase AYR67_07745 PF07977 FabA-like domain AYR67_07750 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_07750 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AYR67_07755 PF13174 Tetratricopeptide repeat AYR67_07755 PF16331 AYR67_07755 AYR67_07765 PF02631 RecX family AYR67_07770 PF00154 recA bacterial DNA recombination protein AYR67_07775 PF01479 S4 domain AYR67_07780 PF13419 Haloacid dehalogenase-like hydrolase AYR67_07785 PF05666 AYR67_07785 AYR67_07800 PF13302 Acetyltransferase (GNAT) domain AYR67_07805 PF01037 AsnC family AYR67_07805 PF13412 Winged helix-turn-helix DNA-binding AYR67_07810 PF00266 Aminotransferase class-V AYR67_07815 PF00324 Amino acid permease AYR67_07820 PF07859 alpha/beta hydrolase fold AYR67_07825 PF00082 Subtilase family AYR67_07825 PF05922 Peptidase inhibitor I9 AYR67_07830 PF00916 AYR67_07830 AYR67_07830 PF01740 STAS domain AYR67_07835 PF02586 Uncharacterised ACR, COG2135 AYR67_07840 PF07995 Glucose / Sorbosone dehydrogenase AYR67_07845 PF00582 Universal stress protein family AYR67_07850 PF00563 EAL domain AYR67_07850 PF00990 GGDEF domain AYR67_07850 PF08447 PAS fold AYR67_07850 PF08448 PAS fold AYR67_07860 PF01047 MarR family AYR67_07870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR67_07870 PF02378 Phosphotransferase system, EIIC AYR67_07875 PF00294 pfkB family carbohydrate kinase AYR67_07880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR67_07880 PF00381 PTS HPr component phosphorylation site AYR67_07880 PF00391 PEP-utilising enzyme, mobile domain AYR67_07880 PF02896 PEP-utilising enzyme, TIM barrel domain AYR67_07880 PF05524 PEP-utilising enzyme, N-terminal AYR67_07885 PF12146 Putative lysophospholipase AYR67_07900 PF03928 Domain of unknown function (DUF336) AYR67_07905 PF05525 AYR67_07905 AYR67_07910 PF00557 Metallopeptidase family M24 AYR67_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_07915 PF03466 LysR substrate binding domain AYR67_07925 PF00462 Glutaredoxin AYR67_07930 PF00202 Aminotransferase class-III AYR67_07935 PF00571 CBS domain AYR67_07940 PF11042 AYR67_07940 AYR67_07960 PF00448 SRP54-type protein, GTPase domain AYR67_07960 PF02881 SRP54-type protein, helical bundle domain AYR67_07965 PF00881 Nitroreductase family AYR67_07970 PF09829 AYR67_07970 AYR67_07975 PF00583 Acetyltransferase (GNAT) family AYR67_07980 PF09600 AYR67_07980 AYR67_07985 PF08173 AYR67_07985 AYR67_07990 PF02322 AYR67_07990 AYR67_07995 PF01654 AYR67_07995 AYR67_08005 PF07290 AYR67_08005 AYR67_08010 PF00355 Rieske [2Fe-2S] domain AYR67_08015 PF00294 pfkB family carbohydrate kinase AYR67_08020 PF00593 TonB dependent receptor AYR67_08020 PF07715 TonB-dependent Receptor Plug Domain AYR67_08025 PF00675 Insulinase (Peptidase family M16) AYR67_08025 PF05193 Peptidase M16 inactive domain AYR67_08025 PF08367 Peptidase M16C associated AYR67_08030 PF02253 Phospholipase A1 AYR67_08035 PF02386 Cation transport protein AYR67_08040 PF02254 TrkA-N domain AYR67_08045 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_08045 PF00585 C-terminal regulatory domain of Threonine dehydratase AYR67_08050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AYR67_08055 PF01863 Protein of unknown function DUF45 AYR67_08065 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR67_08065 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYR67_08075 PF02617 ATP-dependent Clp protease adaptor protein ClpS AYR67_08080 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_08080 PF02861 Clp amino terminal domain AYR67_08080 PF07724 AAA domain (Cdc48 subfamily) AYR67_08080 PF10431 C-terminal, D2-small domain, of ClpB protein AYR67_08085 PF02694 AYR67_08085 AYR67_08090 PF00793 DAHP synthetase I family AYR67_08095 PF12697 Alpha/beta hydrolase family AYR67_08100 PF03551 Transcriptional regulator PadR-like family AYR67_08100 PF10400 Virulence activator alpha C-term AYR67_08105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR67_08105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_08110 PF12680 SnoaL-like domain AYR67_08115 PF13472 GDSL-like Lipase/Acylhydrolase family AYR67_08120 PF12146 Putative lysophospholipase AYR67_08125 PF10118 AYR67_08125 AYR67_08135 PF00117 Glutamine amidotransferase class-I AYR67_08135 PF06418 CTP synthase N-terminus AYR67_08140 PF00793 DAHP synthetase I family AYR67_08145 PF00113 Enolase, C-terminal TIM barrel domain AYR67_08145 PF03952 Enolase, N-terminal domain AYR67_08150 PF04239 Protein of unknown function (DUF421) AYR67_08155 PF04977 Septum formation initiator AYR67_08160 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AYR67_08165 PF01144 Coenzyme A transferase AYR67_08170 PF01144 Coenzyme A transferase AYR67_08175 PF00108 Thiolase, N-terminal domain AYR67_08175 PF02803 Thiolase, C-terminal domain AYR67_08180 PF00206 Lyase AYR67_08180 PF10397 Adenylosuccinate lyase C-terminus AYR67_08185 PF00561 alpha/beta hydrolase fold AYR67_08190 PF07690 Major Facilitator Superfamily AYR67_08195 PF02627 Carboxymuconolactone decarboxylase family AYR67_08200 PF00775 Dioxygenase AYR67_08200 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AYR67_08205 PF00775 Dioxygenase AYR67_08210 PF01487 Type I 3-dehydroquinase AYR67_08215 PF13229 Right handed beta helix region AYR67_08220 PF04966 Carbohydrate-selective porin, OprB family AYR67_08225 PF01011 PQQ enzyme repeat AYR67_08235 PF04143 AYR67_08235 AYR67_08240 PF04143 AYR67_08240 AYR67_08245 PF00753 Metallo-beta-lactamase superfamily AYR67_08250 PF01614 Bacterial transcriptional regulator AYR67_08250 PF09339 IclR helix-turn-helix domain AYR67_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_08255 PF03466 LysR substrate binding domain AYR67_08260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_08260 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_08260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_08265 PF01636 Phosphotransferase enzyme family AYR67_08270 PF00300 Histidine phosphatase superfamily (branch 1) AYR67_08275 PF00106 short chain dehydrogenase AYR67_08280 PF03573 outer membrane porin, OprD family AYR67_08285 PF07690 Major Facilitator Superfamily AYR67_08290 PF01047 MarR family AYR67_08295 PF01425 Amidase AYR67_08300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_08300 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR67_08310 PF13577 SnoaL-like domain AYR67_08315 PF00355 Rieske [2Fe-2S] domain AYR67_08315 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR67_08320 PF00866 Ring hydroxylating beta subunit AYR67_08325 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_08330 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR67_08330 PF00175 Oxidoreductase NAD-binding domain AYR67_08330 PF00970 Oxidoreductase FAD-binding domain AYR67_08335 PF01613 Flavin reductase like domain AYR67_08340 PF12833 Helix-turn-helix domain AYR67_08340 PF14525 AYR67_08340 AYR67_08345 PF01179 Copper amine oxidase, enzyme domain AYR67_08345 PF02727 Copper amine oxidase, N2 domain AYR67_08345 PF02728 Copper amine oxidase, N3 domain AYR67_08345 PF07833 Copper amine oxidase N-terminal domain AYR67_08355 PF00171 Aldehyde dehydrogenase family AYR67_08360 PF01804 Penicillin amidase AYR67_08365 PF00561 alpha/beta hydrolase fold AYR67_08370 PF00108 Thiolase, N-terminal domain AYR67_08370 PF02803 Thiolase, C-terminal domain AYR67_08375 PF01144 Coenzyme A transferase AYR67_08380 PF01144 Coenzyme A transferase AYR67_08385 PF00775 Dioxygenase AYR67_08385 PF04444 Catechol dioxygenase N terminus AYR67_08390 PF02426 Muconolactone delta-isomerase AYR67_08395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AYR67_08395 PF13378 Enolase C-terminal domain-like AYR67_08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_08400 PF03466 LysR substrate binding domain AYR67_08405 PF09694 AYR67_08405 AYR67_08410 PF00392 Bacterial regulatory proteins, gntR family AYR67_08410 PF07729 FCD domain AYR67_08415 PF00920 Dehydratase family AYR67_08420 PF07690 Major Facilitator Superfamily AYR67_08430 PF00171 Aldehyde dehydrogenase family AYR67_08435 PF01636 Phosphotransferase enzyme family AYR67_08445 PF00300 Histidine phosphatase superfamily (branch 1) AYR67_08450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_08450 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_08450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_08455 PF00106 short chain dehydrogenase AYR67_08460 PF00158 Sigma-54 interaction domain AYR67_08460 PF02954 Bacterial regulatory protein, Fis family AYR67_08460 PF06506 Propionate catabolism activator AYR67_08465 PF00501 AMP-binding enzyme AYR67_08465 PF13193 AMP-binding enzyme C-terminal domain AYR67_08470 PF04341 AYR67_08470 AYR67_08475 PF00474 Sodium:solute symporter family AYR67_08480 PF00107 Zinc-binding dehydrogenase AYR67_08480 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_08485 PF00171 Aldehyde dehydrogenase family AYR67_08490 PF06314 Acetoacetate decarboxylase (ADC) AYR67_08495 PF00561 alpha/beta hydrolase fold AYR67_08500 PF00199 Catalase AYR67_08500 PF06628 Catalase-related immune-responsive AYR67_08515 PF01965 DJ-1/PfpI family AYR67_08520 PF07859 alpha/beta hydrolase fold AYR67_08525 PF01047 MarR family AYR67_08530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR67_08535 PF03435 Saccharopine dehydrogenase AYR67_08540 PF01872 RibD C-terminal domain AYR67_08545 PF13411 MerR HTH family regulatory protein AYR67_08550 PF01965 DJ-1/PfpI family AYR67_08555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_08560 PF02082 Transcriptional regulator AYR67_08565 PF12706 Beta-lactamase superfamily domain AYR67_08570 PF00440 Bacterial regulatory proteins, tetR family AYR67_08575 PF03992 Antibiotic biosynthesis monooxygenase AYR67_08580 PF00857 Isochorismatase family AYR67_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_08585 PF03466 LysR substrate binding domain AYR67_08590 PF07995 Glucose / Sorbosone dehydrogenase AYR67_08595 PF00999 Sodium/hydrogen exchanger family AYR67_08595 PF02254 TrkA-N domain AYR67_08605 PF01546 Peptidase family M20/M25/M40 AYR67_08605 PF07687 Peptidase dimerisation domain AYR67_08610 PF00440 Bacterial regulatory proteins, tetR family AYR67_08615 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AYR67_08615 PF08479 POTRA domain, ShlB-type AYR67_08615 PF17287 AYR67_08615 AYR67_08620 PF04829 AYR67_08620 AYR67_08620 PF04830 AYR67_08620 AYR67_08620 PF05860 haemagglutination activity domain AYR67_08620 PF13018 AYR67_08620 AYR67_08635 PF07690 Major Facilitator Superfamily AYR67_08640 PF04909 Amidohydrolase AYR67_08645 PF07158 AYR67_08645 AYR67_08650 PF00392 Bacterial regulatory proteins, gntR family AYR67_08650 PF07702 UTRA domain AYR67_08655 PF08450 SMP-30/Gluconolaconase/LRE-like region AYR67_08665 PF07690 Major Facilitator Superfamily AYR67_08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_08670 PF03466 LysR substrate binding domain AYR67_08675 PF04657 AYR67_08675 AYR67_08680 PF04657 AYR67_08680 AYR67_08685 PF01614 Bacterial transcriptional regulator AYR67_08685 PF09339 IclR helix-turn-helix domain AYR67_08690 PF07690 Major Facilitator Superfamily AYR67_08695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR67_08695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR67_08700 PF03737 Demethylmenaquinone methyltransferase AYR67_08710 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AYR67_08715 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AYR67_08720 PF13437 HlyD family secretion protein AYR67_08720 PF13533 Biotin-lipoyl like AYR67_08725 PF07690 Major Facilitator Superfamily AYR67_08730 PF00440 Bacterial regulatory proteins, tetR family AYR67_08730 PF14246 AefR-like transcriptional repressor, C-terminal region AYR67_08735 PF00171 Aldehyde dehydrogenase family AYR67_08740 PF00920 Dehydratase family AYR67_08745 PF01557 Fumarylacetoacetate (FAA) hydrolase family AYR67_08750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_08750 PF03466 LysR substrate binding domain AYR67_08755 PF01370 NAD dependent epimerase/dehydratase family AYR67_08760 PF07690 Major Facilitator Superfamily AYR67_08765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR67_08765 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR67_08770 PF06719 AYR67_08770 AYR67_08770 PF12833 Helix-turn-helix domain AYR67_08775 PF07883 Cupin domain AYR67_08780 PF02627 Carboxymuconolactone decarboxylase family AYR67_08785 PF00107 Zinc-binding dehydrogenase AYR67_08785 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_08790 PF01497 Periplasmic binding protein AYR67_08795 PF01032 FecCD transport family AYR67_08800 PF00005 ABC transporter AYR67_08805 PF00583 Acetyltransferase (GNAT) family AYR67_08810 PF02311 AraC-like ligand binding domain AYR67_08810 PF12833 Helix-turn-helix domain AYR67_08815 PF01925 AYR67_08815 AYR67_08820 PF00156 Phosphoribosyl transferase domain AYR67_08825 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYR67_08830 PF00293 NUDIX domain AYR67_08835 PF02219 Methylenetetrahydrofolate reductase AYR67_08835 PF12225 AYR67_08835 AYR67_08895 PF00196 Bacterial regulatory proteins, luxR family AYR67_08900 PF01425 Amidase AYR67_08905 PF13437 HlyD family secretion protein AYR67_08905 PF13533 Biotin-lipoyl like AYR67_08910 PF07690 Major Facilitator Superfamily AYR67_08920 PF03321 GH3 auxin-responsive promoter AYR67_08925 PF02321 Outer membrane efflux protein AYR67_08935 PF01975 Survival protein SurE AYR67_08945 PF13328 HD domain AYR67_08950 PF01381 Helix-turn-helix AYR67_08955 PF00440 Bacterial regulatory proteins, tetR family AYR67_08965 PF03374 AYR67_08965 AYR67_08975 PF05488 PAAR motif AYR67_08985 PF00106 short chain dehydrogenase AYR67_08990 PF00106 short chain dehydrogenase AYR67_08995 PF12146 Putative lysophospholipase AYR67_09000 PF12625 AYR67_09000 AYR67_09000 PF12833 Helix-turn-helix domain AYR67_09010 PF00512 His Kinase A (phospho-acceptor) domain AYR67_09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_09015 PF00072 Response regulator receiver domain AYR67_09015 PF00486 Transcriptional regulatory protein, C terminal AYR67_09020 PF16576 AYR67_09020 AYR67_09025 PF00873 AcrB/AcrD/AcrF family AYR67_09030 PF02321 Outer membrane efflux protein AYR67_09035 PF12146 Putative lysophospholipase AYR67_09040 PF13738 Pyridine nucleotide-disulphide oxidoreductase AYR67_09045 PF01593 Flavin containing amine oxidoreductase AYR67_09050 PF03435 Saccharopine dehydrogenase AYR67_09055 PF00440 Bacterial regulatory proteins, tetR family AYR67_09060 PF01266 FAD dependent oxidoreductase AYR67_09080 PF16970 AYR67_09080 AYR67_09085 PF01609 Transposase DDE domain AYR67_09090 PF01609 Transposase DDE domain AYR67_09095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYR67_09095 PF02753 Pili assembly chaperone PapD, C-terminal domain AYR67_09100 PF00577 Outer membrane usher protein AYR67_09100 PF13953 PapC C-terminal domain AYR67_09100 PF13954 PapC N-terminal domain AYR67_09105 PF00419 Fimbrial protein AYR67_09110 PF16223 AYR67_09110 AYR67_09115 PF00107 Zinc-binding dehydrogenase AYR67_09115 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_09125 PF00199 Catalase AYR67_09140 PF13091 PLD-like domain AYR67_09160 PF01244 Membrane dipeptidase (Peptidase family M19) AYR67_09165 PF04055 Radical SAM superfamily AYR67_09165 PF13186 Iron-sulfur cluster-binding domain AYR67_09165 PF13353 4Fe-4S single cluster domain AYR67_09170 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AYR67_09175 PF03070 TENA/THI-4/PQQC family AYR67_09180 PF12706 Beta-lactamase superfamily domain AYR67_09185 PF02503 Polyphosphate kinase middle domain AYR67_09185 PF13089 Polyphosphate kinase N-terminal domain AYR67_09185 PF13090 Polyphosphate kinase C-terminal domain AYR67_09190 PF00149 Calcineurin-like phosphoesterase AYR67_09190 PF02872 5'-nucleotidase, C-terminal domain AYR67_09195 PF01475 Ferric uptake regulator family AYR67_09200 PF00857 Isochorismatase family AYR67_09205 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_09210 PF00005 ABC transporter AYR67_09215 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_09220 PF13531 Bacterial extracellular solute-binding protein AYR67_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_09230 PF00355 Rieske [2Fe-2S] domain AYR67_09230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR67_09235 PF00866 Ring hydroxylating beta subunit AYR67_09240 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR67_09240 PF00175 Oxidoreductase NAD-binding domain AYR67_09240 PF00970 Oxidoreductase FAD-binding domain AYR67_09245 PF12833 Helix-turn-helix domain AYR67_09245 PF14525 AYR67_09245 AYR67_09250 PF13557 AYR67_09250 AYR67_09255 PF01613 Flavin reductase like domain AYR67_09265 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_09270 PF01738 Dienelactone hydrolase family AYR67_09280 PF12833 Helix-turn-helix domain AYR67_09280 PF14525 AYR67_09280 AYR67_09285 PF01609 Transposase DDE domain AYR67_09290 PF01609 Transposase DDE domain AYR67_09295 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_09300 PF02447 AYR67_09300 AYR67_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_09310 PF03466 LysR substrate binding domain AYR67_09315 PF01144 Coenzyme A transferase AYR67_09320 PF01144 Coenzyme A transferase AYR67_09325 PF02667 AYR67_09325 AYR67_09330 PF00108 Thiolase, N-terminal domain AYR67_09330 PF02803 Thiolase, C-terminal domain AYR67_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_09335 PF03466 LysR substrate binding domain AYR67_09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_09340 PF03466 LysR substrate binding domain AYR67_09355 PF00206 Lyase AYR67_09355 PF10415 Fumarase C C-terminus AYR67_09360 PF00593 TonB dependent receptor AYR67_09360 PF07715 TonB-dependent Receptor Plug Domain AYR67_09365 PF00083 Sugar (and other) transporter AYR67_09365 PF07690 Major Facilitator Superfamily AYR67_09370 PF06155 Protein of unknown function (DUF971) AYR67_09375 PF13646 HEAT repeats AYR67_09380 PF00005 ABC transporter AYR67_09385 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_09390 PF13379 NMT1-like family AYR67_09395 PF12838 4Fe-4S dicluster domain AYR67_09400 PF00890 FAD binding domain AYR67_09400 PF02910 Fumarate reductase flavoprotein C-term AYR67_09405 PF00392 Bacterial regulatory proteins, gntR family AYR67_09405 PF07702 UTRA domain AYR67_09410 PF02417 AYR67_09410 AYR67_09415 PF02525 Flavodoxin-like fold AYR67_09420 PF01638 HxlR-like helix-turn-helix AYR67_09425 PF12833 Helix-turn-helix domain AYR67_09430 PF00892 EamA-like transporter family AYR67_09435 PF00742 Homoserine dehydrogenase AYR67_09435 PF03447 Homoserine dehydrogenase, NAD binding domain AYR67_09440 PF01925 AYR67_09440 AYR67_09445 PF04273 Putative phosphatase (DUF442) AYR67_09445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_09450 PF00753 Metallo-beta-lactamase superfamily AYR67_09455 PF00158 Sigma-54 interaction domain AYR67_09455 PF02954 Bacterial regulatory protein, Fis family AYR67_09460 PF01062 AYR67_09460 AYR67_09465 PF00107 Zinc-binding dehydrogenase AYR67_09465 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_09470 PF00106 short chain dehydrogenase AYR67_09475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR67_09475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_09480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYR67_09480 PF00364 Biotin-requiring enzyme AYR67_09480 PF02817 e3 binding domain AYR67_09485 PF02779 Transketolase, pyrimidine binding domain AYR67_09485 PF02780 Transketolase, C-terminal domain AYR67_09490 PF00676 Dehydrogenase E1 component AYR67_09495 PF04055 Radical SAM superfamily AYR67_09505 PF14518 Iron-containing redox enzyme AYR67_09510 PF00990 GGDEF domain AYR67_09515 PF01264 Chorismate synthase AYR67_09520 PF05175 Methyltransferase small domain AYR67_09525 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_09530 PF05762 VWA domain containing CoxE-like protein AYR67_09535 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_09545 PF05166 YcgL domain AYR67_09565 PF00570 HRDC domain AYR67_09565 PF01612 3'-5' exonuclease AYR67_09570 PF02132 RecR protein AYR67_09570 PF13662 Toprim domain AYR67_09575 PF02575 YbaB/EbfC DNA-binding family AYR67_09585 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR67_09590 PF00561 alpha/beta hydrolase fold AYR67_09595 PF08241 Methyltransferase domain AYR67_09600 PF13103 TonB C terminal AYR67_09615 PF04828 Glutathione-dependent formaldehyde-activating enzyme AYR67_09620 PF13308 YARHG domain AYR67_09625 PF01230 HIT domain AYR67_09630 PF13609 Gram-negative porin AYR67_09635 PF01609 Transposase DDE domain AYR67_09640 PF01609 Transposase DDE domain AYR67_09645 PF06078 Bacterial protein of unknown function (DUF937) AYR67_09655 PF10977 AYR67_09655 AYR67_09660 PF12698 ABC-2 family transporter protein AYR67_09665 PF12698 ABC-2 family transporter protein AYR67_09670 PF00005 ABC transporter AYR67_09675 PF13437 HlyD family secretion protein AYR67_09675 PF13533 Biotin-lipoyl like AYR67_09680 PF00440 Bacterial regulatory proteins, tetR family AYR67_09680 PF09209 Domain of unknown function (DUF1956) AYR67_09685 PF02684 AYR67_09685 AYR67_09690 PF00593 TonB dependent receptor AYR67_09690 PF07715 TonB-dependent Receptor Plug Domain AYR67_09700 PF03929 AYR67_09700 AYR67_09710 PF01925 AYR67_09710 AYR67_09715 PF00793 DAHP synthetase I family AYR67_09720 PF02654 AYR67_09720 AYR67_09725 PF00328 Histidine phosphatase superfamily (branch 2) AYR67_09730 PF00300 Histidine phosphatase superfamily (branch 1) AYR67_09735 PF02277 Phosphoribosyltransferase AYR67_09740 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AYR67_09745 PF13563 2'-5' RNA ligase superfamily AYR67_09750 PF08125 Mannitol dehydrogenase C-terminal domain AYR67_09750 PF13419 Haloacid dehalogenase-like hydrolase AYR67_09755 PF13523 Acetyltransferase (GNAT) domain AYR67_09765 PF03929 AYR67_09765 AYR67_09775 PF00593 TonB dependent receptor AYR67_09775 PF07715 TonB-dependent Receptor Plug Domain AYR67_09780 PF03737 Demethylmenaquinone methyltransferase AYR67_09785 PF11575 AYR67_09785 AYR67_09790 PF04183 IucA / IucC family AYR67_09790 PF06276 Ferric iron reductase FhuF-like transporter AYR67_09795 PF04183 IucA / IucC family AYR67_09795 PF06276 Ferric iron reductase FhuF-like transporter AYR67_09800 PF07690 Major Facilitator Superfamily AYR67_09805 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AYR67_09810 PF04183 IucA / IucC family AYR67_09810 PF06276 Ferric iron reductase FhuF-like transporter AYR67_09815 PF04073 Aminoacyl-tRNA editing domain AYR67_09825 PF03109 AYR67_09825 AYR67_09830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_09830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_09835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_09835 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_09840 PF00487 AYR67_09840 AYR67_09845 PF12833 Helix-turn-helix domain AYR67_09845 PF12852 Cupin AYR67_09850 PF13616 PPIC-type PPIASE domain AYR67_09850 PF13624 SurA N-terminal domain AYR67_09855 PF00216 Bacterial DNA-binding protein AYR67_09860 PF05597 AYR67_09860 AYR67_09870 PF02082 Transcriptional regulator AYR67_09875 PF00266 Aminotransferase class-V AYR67_09880 PF01592 NifU-like N terminal domain AYR67_09885 PF01521 Iron-sulphur cluster biosynthesis AYR67_09890 PF00226 DnaJ domain AYR67_09890 PF07743 HSCB C-terminal oligomerisation domain AYR67_09895 PF00012 Hsp70 protein AYR67_09900 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR67_09905 PF00211 Adenylate and Guanylate cyclase catalytic domain AYR67_09910 PF01230 HIT domain AYR67_09915 PF00270 DEAD/DEAH box helicase AYR67_09915 PF00271 Helicase conserved C-terminal domain AYR67_09915 PF02559 CarD-like/TRCF domain AYR67_09915 PF03461 TRCF domain AYR67_09925 PF04261 Dyp-type peroxidase family AYR67_09930 PF13417 Glutathione S-transferase, N-terminal domain AYR67_09935 PF03737 Demethylmenaquinone methyltransferase AYR67_09940 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR67_09945 PF01649 Ribosomal protein S20 AYR67_09950 PF00300 Histidine phosphatase superfamily (branch 1) AYR67_09955 PF00459 Inositol monophosphatase family AYR67_09965 PF02586 Uncharacterised ACR, COG2135 AYR67_09970 PF00005 ABC transporter AYR67_09970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYR67_09975 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_09975 PF12911 AYR67_09975 AYR67_09980 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_09985 PF01432 Peptidase family M3 AYR67_09990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYR67_09995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYR67_10000 PF00593 TonB dependent receptor AYR67_10000 PF07715 TonB-dependent Receptor Plug Domain AYR67_10005 PF03544 Gram-negative bacterial TonB protein C-terminal AYR67_10010 PF01618 AYR67_10010 AYR67_10015 PF02472 Biopolymer transport protein ExbD/TolR AYR67_10020 PF02472 Biopolymer transport protein ExbD/TolR AYR67_10025 PF00583 Acetyltransferase (GNAT) family AYR67_10030 PF01274 Malate synthase AYR67_10035 PF03969 AFG1-like ATPase AYR67_10040 PF12625 AYR67_10040 AYR67_10040 PF12833 Helix-turn-helix domain AYR67_10045 PF00743 Flavin-binding monooxygenase-like AYR67_10050 PF03956 AYR67_10050 AYR67_10055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AYR67_10060 PF06305 AYR67_10060 AYR67_10065 PF00216 Bacterial DNA-binding protein AYR67_10070 PF00575 S1 RNA binding domain AYR67_10075 PF02224 Cytidylate kinase AYR67_10080 PF10604 Polyketide cyclase / dehydrase and lipid transport AYR67_10085 PF14437 AYR67_10085 AYR67_10090 PF16113 AYR67_10090 AYR67_10095 PF03167 Uracil DNA glycosylase superfamily AYR67_10100 PF01242 6-pyruvoyl tetrahydropterin synthase AYR67_10105 PF03934 Type II secretion system (T2SS), protein K AYR67_10110 PF07963 Prokaryotic N-terminal methylation motif AYR67_10110 PF11612 Type II secretion system (T2SS), protein J AYR67_10115 PF02501 Type II secretion system (T2SS), protein I AYR67_10115 PF07963 Prokaryotic N-terminal methylation motif AYR67_10120 PF07963 Prokaryotic N-terminal methylation motif AYR67_10125 PF00440 Bacterial regulatory proteins, tetR family AYR67_10130 PF01026 TatD related DNase AYR67_10135 PF07238 PilZ domain AYR67_10140 PF13177 DNA polymerase III, delta subunit AYR67_10145 PF02348 Cytidylyltransferase AYR67_10150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AYR67_10155 PF00005 ABC transporter AYR67_10155 PF00664 ABC transporter transmembrane region AYR67_10160 PF02472 Biopolymer transport protein ExbD/TolR AYR67_10165 PF01618 AYR67_10165 AYR67_10170 PF02195 ParB-like nuclease domain AYR67_10175 PF13614 AAA domain AYR67_10180 PF02527 rRNA small subunit methyltransferase G AYR67_10185 PF00483 Nucleotidyl transferase AYR67_10190 PF01636 Phosphotransferase enzyme family AYR67_10195 PF03968 OstA-like protein AYR67_10195 PF04453 Organic solvent tolerance protein AYR67_10200 PF00639 PPIC-type PPIASE domain AYR67_10200 PF09312 SurA N-terminal domain AYR67_10200 PF13616 PPIC-type PPIASE domain AYR67_10205 PF01116 Fructose-bisphosphate aldolase class-II AYR67_10215 PF00162 Phosphoglycerate kinase AYR67_10220 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) AYR67_10225 PF02545 Maf-like protein AYR67_10230 PF08007 Cupin superfamily protein AYR67_10235 PF00440 Bacterial regulatory proteins, tetR family AYR67_10240 PF01022 Bacterial regulatory protein, arsR family AYR67_10245 PF00375 Sodium:dicarboxylate symporter family AYR67_10250 PF06912 AYR67_10250 AYR67_10255 PF09831 AYR67_10255 AYR67_10260 PF00005 ABC transporter AYR67_10260 PF00664 ABC transporter transmembrane region AYR67_10265 PF01575 MaoC like domain AYR67_10270 PF12625 AYR67_10270 AYR67_10270 PF12833 Helix-turn-helix domain AYR67_10275 PF01597 Glycine cleavage H-protein AYR67_10280 PF02146 Sir2 family AYR67_10285 PF00474 Sodium:solute symporter family AYR67_10290 PF01037 AsnC family AYR67_10290 PF13404 AsnC-type helix-turn-helix domain AYR67_10295 PF00171 Aldehyde dehydrogenase family AYR67_10295 PF01619 Proline dehydrogenase AYR67_10295 PF14850 DNA-binding domain of Proline dehydrogenase AYR67_10300 PF04229 GrpB protein AYR67_10305 PF05958 tRNA (Uracil-5-)-methyltransferase AYR67_10315 PF09992 Predicted periplasmic protein (DUF2233) AYR67_10320 PF04970 Lecithin retinol acyltransferase AYR67_10325 PF04264 YceI-like domain AYR67_10330 PF02566 OsmC-like protein AYR67_10335 PF00456 Transketolase, thiamine diphosphate binding domain AYR67_10335 PF02779 Transketolase, pyrimidine binding domain AYR67_10335 PF02780 Transketolase, C-terminal domain AYR67_10340 PF00438 S-adenosylmethionine synthetase, N-terminal domain AYR67_10340 PF02772 S-adenosylmethionine synthetase, central domain AYR67_10340 PF02773 S-adenosylmethionine synthetase, C-terminal domain AYR67_10355 PF04186 AYR67_10355 AYR67_10360 PF00905 Penicillin binding protein transpeptidase domain AYR67_10365 PF13420 Acetyltransferase (GNAT) domain AYR67_10370 PF01381 Helix-turn-helix AYR67_10375 PF02075 Crossover junction endodeoxyribonuclease RuvC AYR67_10380 PF01256 Carbohydrate kinase AYR67_10380 PF03853 YjeF-related protein N-terminus AYR67_10385 PF08331 AYR67_10385 AYR67_10385 PF13484 AYR67_10385 AYR67_10390 PF04055 Radical SAM superfamily AYR67_10390 PF06968 Biotin and Thiamin Synthesis associated domain AYR67_10405 PF16970 AYR67_10405 AYR67_10410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYR67_10410 PF02753 Pili assembly chaperone PapD, C-terminal domain AYR67_10415 PF00577 Outer membrane usher protein AYR67_10415 PF13953 PapC C-terminal domain AYR67_10415 PF13954 PapC N-terminal domain AYR67_10420 PF00419 Fimbrial protein AYR67_10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10430 PF03466 LysR substrate binding domain AYR67_10435 PF00892 EamA-like transporter family AYR67_10445 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYR67_10450 PF05232 AYR67_10450 AYR67_10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10455 PF03466 LysR substrate binding domain AYR67_10460 PF00589 Phage integrase family AYR67_10460 PF13356 Domain of unknown function (DUF4102) AYR67_10475 PF00440 Bacterial regulatory proteins, tetR family AYR67_10480 PF01553 Acyltransferase AYR67_10485 PF01709 Transcriptional regulator AYR67_10490 PF01037 AsnC family AYR67_10490 PF13412 Winged helix-turn-helix DNA-binding AYR67_10500 PF00005 ABC transporter AYR67_10505 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_10510 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_10515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR67_10520 PF13417 Glutathione S-transferase, N-terminal domain AYR67_10520 PF14497 Glutathione S-transferase, C-terminal domain AYR67_10525 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_10525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_10525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR67_10530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_10530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR67_10535 PF00296 Luciferase-like monooxygenase AYR67_10540 PF03180 NLPA lipoprotein AYR67_10545 PF03180 NLPA lipoprotein AYR67_10550 PF00005 ABC transporter AYR67_10550 PF09383 NIL domain AYR67_10555 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_10560 PF01926 50S ribosome-binding GTPase AYR67_10560 PF06071 Protein of unknown function (DUF933) AYR67_10565 PF06127 AYR67_10565 AYR67_10570 PF00027 Cyclic nucleotide-binding domain AYR67_10570 PF13545 Crp-like helix-turn-helix domain AYR67_10585 PF03591 AYR67_10585 AYR67_10590 PF05437 AYR67_10590 AYR67_10595 PF14552 Tautomerase enzyme AYR67_10600 PF02222 ATP-grasp domain AYR67_10605 PF01909 Nucleotidyltransferase domain AYR67_10605 PF01966 HD domain AYR67_10605 PF08335 GlnD PII-uridylyltransferase AYR67_10610 PF00155 Aminotransferase class I and II AYR67_10615 PF01810 AYR67_10615 AYR67_10620 PF02311 AraC-like ligand binding domain AYR67_10620 PF12833 Helix-turn-helix domain AYR67_10625 PF00255 Glutathione peroxidase AYR67_10630 PF01641 SelR domain AYR67_10635 PF00155 Aminotransferase class I and II AYR67_10640 PF00375 Sodium:dicarboxylate symporter family AYR67_10645 PF00710 Asparaginase AYR67_10650 PF02811 PHP domain AYR67_10650 PF07733 Bacterial DNA polymerase III alpha subunit AYR67_10650 PF14579 Helix-hairpin-helix motif AYR67_10655 PF00588 SpoU rRNA Methylase family AYR67_10660 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_10660 PF06426 Serine acetyltransferase, N-terminal AYR67_10675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_10675 PF13192 Thioredoxin domain AYR67_10680 PF02417 AYR67_10680 AYR67_10685 PF02417 AYR67_10685 AYR67_10690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10690 PF03466 LysR substrate binding domain AYR67_10695 PF01758 Sodium Bile acid symporter family AYR67_10700 PF01022 Bacterial regulatory protein, arsR family AYR67_10705 PF03960 ArsC family AYR67_10710 PF07235 AYR67_10710 AYR67_10715 PF07969 Amidohydrolase family AYR67_10720 PF00857 Isochorismatase family AYR67_10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10725 PF03466 LysR substrate binding domain AYR67_10730 PF00392 Bacterial regulatory proteins, gntR family AYR67_10730 PF07729 FCD domain AYR67_10735 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYR67_10740 PF01177 Asp/Glu/Hydantoin racemase AYR67_10745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AYR67_10750 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_10755 PF00005 ABC transporter AYR67_10760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AYR67_10770 PF00083 Sugar (and other) transporter AYR67_10775 PF00296 Luciferase-like monooxygenase AYR67_10780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR67_10790 PF01654 AYR67_10790 AYR67_10795 PF02322 AYR67_10795 AYR67_10805 PF00155 Aminotransferase class I and II AYR67_10805 PF00392 Bacterial regulatory proteins, gntR family AYR67_10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10810 PF03466 LysR substrate binding domain AYR67_10815 PF03818 AYR67_10815 AYR67_10820 PF03817 AYR67_10820 AYR67_10825 PF00698 Acyl transferase domain AYR67_10830 PF10620 AYR67_10830 AYR67_10835 PF06833 Malonate decarboxylase gamma subunit (MdcE) AYR67_10840 PF01039 Carboxyl transferase domain AYR67_10845 PF06857 AYR67_10845 AYR67_10850 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AYR67_10855 PF16957 AYR67_10855 AYR67_10860 PF07690 Major Facilitator Superfamily AYR67_10865 PF13302 Acetyltransferase (GNAT) domain AYR67_10870 PF04299 Putative FMN-binding domain AYR67_10875 PF00155 Aminotransferase class I and II AYR67_10875 PF00392 Bacterial regulatory proteins, gntR family AYR67_10880 PF04172 AYR67_10880 AYR67_10885 PF03788 AYR67_10885 AYR67_10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10890 PF03466 LysR substrate binding domain AYR67_10895 PF13417 Glutathione S-transferase, N-terminal domain AYR67_10895 PF14834 Glutathione S-transferase, C-terminal domain AYR67_10900 PF00043 Glutathione S-transferase, C-terminal domain AYR67_10900 PF02798 Glutathione S-transferase, N-terminal domain AYR67_10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10905 PF03466 LysR substrate binding domain AYR67_10910 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_10915 PF00581 Rhodanese-like domain AYR67_10920 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_10920 PF06426 Serine acetyltransferase, N-terminal AYR67_10930 PF00266 Aminotransferase class-V AYR67_10935 PF01810 AYR67_10935 AYR67_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_10940 PF03466 LysR substrate binding domain AYR67_10945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR67_10950 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR67_10955 PF00005 ABC transporter AYR67_10960 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_10965 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_10970 PF14542 GCN5-related N-acetyl-transferase AYR67_10975 PF00072 Response regulator receiver domain AYR67_10975 PF00196 Bacterial regulatory proteins, luxR family AYR67_10980 PF00072 Response regulator receiver domain AYR67_10980 PF00512 His Kinase A (phospho-acceptor) domain AYR67_10980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_10990 PF01037 AsnC family AYR67_10990 PF13412 Winged helix-turn-helix DNA-binding AYR67_10995 PF01810 AYR67_10995 AYR67_11000 PF00717 Peptidase S24-like AYR67_11010 PF10685 AYR67_11010 AYR67_11020 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_11025 PF00199 Catalase AYR67_11025 PF06628 Catalase-related immune-responsive AYR67_11030 PF14518 Iron-containing redox enzyme AYR67_11035 PF02464 Competence-damaged protein AYR67_11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_11070 PF03466 LysR substrate binding domain AYR67_11075 PF13472 GDSL-like Lipase/Acylhydrolase family AYR67_11085 PF13649 Methyltransferase domain AYR67_11090 PF00501 AMP-binding enzyme AYR67_11090 PF13193 AMP-binding enzyme C-terminal domain AYR67_11095 PF00440 Bacterial regulatory proteins, tetR family AYR67_11100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_11100 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_11100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_11105 PF01039 Carboxyl transferase domain AYR67_11110 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_11115 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AYR67_11115 PF00364 Biotin-requiring enzyme AYR67_11115 PF02785 Biotin carboxylase C-terminal domain AYR67_11115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR67_11120 PF00682 HMGL-like AYR67_11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_11125 PF03466 LysR substrate binding domain AYR67_11130 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AYR67_11135 PF13622 Thioesterase-like superfamily AYR67_11140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_11140 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_11140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_11140 PF12418 AYR67_11140 AYR67_11140 PF12806 AYR67_11140 AYR67_11145 PF03061 Thioesterase superfamily AYR67_11150 PF07690 Major Facilitator Superfamily AYR67_11160 PF01144 Coenzyme A transferase AYR67_11165 PF01144 Coenzyme A transferase AYR67_11170 PF07690 Major Facilitator Superfamily AYR67_11175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_11175 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_11175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_11180 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_11185 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_11190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR67_11190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR67_11195 PF00108 Thiolase, N-terminal domain AYR67_11195 PF02803 Thiolase, C-terminal domain AYR67_11200 PF01614 Bacterial transcriptional regulator AYR67_11200 PF09339 IclR helix-turn-helix domain AYR67_11205 PF07690 Major Facilitator Superfamily AYR67_11210 PF03060 Nitronate monooxygenase AYR67_11215 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_11220 PF01614 Bacterial transcriptional regulator AYR67_11220 PF09339 IclR helix-turn-helix domain AYR67_11225 PF02515 CoA-transferase family III AYR67_11230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_11230 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_11230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_11235 PF07690 Major Facilitator Superfamily AYR67_11240 PF13419 Haloacid dehalogenase-like hydrolase AYR67_11245 PF00266 Aminotransferase class-V AYR67_11250 PF01266 FAD dependent oxidoreductase AYR67_11255 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_11260 PF00005 ABC transporter AYR67_11265 PF13343 Bacterial extracellular solute-binding protein AYR67_11270 PF00392 Bacterial regulatory proteins, gntR family AYR67_11270 PF07702 UTRA domain AYR67_11275 PF01494 FAD binding domain AYR67_11280 PF01614 Bacterial transcriptional regulator AYR67_11280 PF09339 IclR helix-turn-helix domain AYR67_11285 PF02525 Flavodoxin-like fold AYR67_11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_11290 PF03466 LysR substrate binding domain AYR67_11295 PF02627 Carboxymuconolactone decarboxylase family AYR67_11300 PF00171 Aldehyde dehydrogenase family AYR67_11310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYR67_11315 PF00171 Aldehyde dehydrogenase family AYR67_11320 PF00296 Luciferase-like monooxygenase AYR67_11325 PF01613 Flavin reductase like domain AYR67_11330 PF12697 Alpha/beta hydrolase family AYR67_11335 PF06684 Amino acid synthesis AYR67_11340 PF00392 Bacterial regulatory proteins, gntR family AYR67_11340 PF07729 FCD domain AYR67_11345 PF07045 Protein of unknown function (DUF1330) AYR67_11350 PF01292 Prokaryotic cytochrome b561 AYR67_11355 PF00199 Catalase AYR67_11365 PF00440 Bacterial regulatory proteins, tetR family AYR67_11375 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AYR67_11390 PF03061 Thioesterase superfamily AYR67_11395 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_11400 PF07848 PaaX-like protein AYR67_11400 PF08223 PaaX-like protein C-terminal domain AYR67_11405 PF00501 AMP-binding enzyme AYR67_11405 PF14535 AMP-binding enzyme C-terminal domain AYR67_11410 PF00108 Thiolase, N-terminal domain AYR67_11410 PF02803 Thiolase, C-terminal domain AYR67_11415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR67_11415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR67_11420 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_11425 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_11430 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR67_11430 PF00175 Oxidoreductase NAD-binding domain AYR67_11430 PF00970 Oxidoreductase FAD-binding domain AYR67_11435 PF01883 Domain of unknown function DUF59 AYR67_11440 PF05138 Phenylacetic acid catabolic protein AYR67_11445 PF06243 Phenylacetic acid degradation B AYR67_11450 PF05138 Phenylacetic acid catabolic protein AYR67_11455 PF00171 Aldehyde dehydrogenase family AYR67_11455 PF01575 MaoC like domain AYR67_11460 PF03313 AYR67_11460 AYR67_11460 PF03315 Serine dehydratase beta chain AYR67_11465 PF13520 Amino acid permease AYR67_11470 PF00171 Aldehyde dehydrogenase family AYR67_11475 PF00083 Sugar (and other) transporter AYR67_11480 PF08448 PAS fold AYR67_11480 PF12833 Helix-turn-helix domain AYR67_11485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_11490 PF13510 2Fe-2S iron-sulfur cluster binding domain AYR67_11495 PF01266 FAD dependent oxidoreductase AYR67_11500 PF05544 Proline racemase AYR67_11505 PF00392 Bacterial regulatory proteins, gntR family AYR67_11505 PF07729 FCD domain AYR67_11510 PF00892 EamA-like transporter family AYR67_11515 PF00701 Dihydrodipicolinate synthetase family AYR67_11520 PF03891 AYR67_11520 AYR67_11520 PF11720 Peptidase inhibitor I78 family AYR67_11525 PF00376 MerR family regulatory protein AYR67_11525 PF09278 MerR, DNA binding AYR67_11530 PF01609 Transposase DDE domain AYR67_11535 PF01609 Transposase DDE domain AYR67_11545 PF02677 AYR67_11545 AYR67_11550 PF00583 Acetyltransferase (GNAT) family AYR67_11555 PF06224 AYR67_11555 AYR67_11560 PF07690 Major Facilitator Superfamily AYR67_11565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYR67_11570 PF12796 Ankyrin repeats (3 copies) AYR67_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_11575 PF03466 LysR substrate binding domain AYR67_11580 PF13539 D-alanyl-D-alanine carboxypeptidase AYR67_11590 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AYR67_11595 PF05936 AYR67_11595 AYR67_11600 PF06812 AYR67_11600 AYR67_11605 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_11605 PF07724 AAA domain (Cdc48 subfamily) AYR67_11605 PF10431 C-terminal, D2-small domain, of ClpB protein AYR67_11610 PF13737 AYR67_11610 AYR67_11615 PF05488 PAAR motif AYR67_11620 PF00691 OmpA family AYR67_11625 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AYR67_11630 PF06744 AYR67_11630 AYR67_11630 PF06761 AYR67_11630 AYR67_11630 PF14331 AYR67_11630 AYR67_11640 PF06996 AYR67_11640 AYR67_11645 PF05947 AYR67_11645 AYR67_11650 PF04965 Gene 25-like lysozyme AYR67_11655 PF05638 Protein of unknown function (DUF796) AYR67_11660 PF05943 AYR67_11660 AYR67_11665 PF05591 AYR67_11665 AYR67_11680 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_11685 PF00005 ABC transporter AYR67_11690 PF09084 NMT1/THI5 like AYR67_11695 PF01425 Amidase AYR67_11700 PF08753 NikR C terminal nickel binding domain AYR67_11715 PF01638 HxlR-like helix-turn-helix AYR67_11720 PF02525 Flavodoxin-like fold AYR67_11725 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AYR67_11725 PF00364 Biotin-requiring enzyme AYR67_11725 PF02626 Allophanate hydrolase subunit 2 AYR67_11725 PF02682 Allophanate hydrolase subunit 1 AYR67_11725 PF02785 Biotin carboxylase C-terminal domain AYR67_11725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR67_11730 PF09347 Domain of unknown function (DUF1989) AYR67_11735 PF09347 Domain of unknown function (DUF1989) AYR67_11740 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_11740 PF13823 Alcohol dehydrogenase GroES-associated AYR67_11745 PF10604 Polyketide cyclase / dehydrase and lipid transport AYR67_11750 PF00440 Bacterial regulatory proteins, tetR family AYR67_11770 PF08238 Sel1 repeat AYR67_11775 PF00654 Voltage gated chloride channel AYR67_11780 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AYR67_11780 PF00364 Biotin-requiring enzyme AYR67_11780 PF02785 Biotin carboxylase C-terminal domain AYR67_11780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR67_11785 PF02626 Allophanate hydrolase subunit 2 AYR67_11785 PF02682 Allophanate hydrolase subunit 1 AYR67_11790 PF07286 Protein of unknown function (DUF1445) AYR67_11795 PF03746 LamB/YcsF family AYR67_11800 PF01566 AYR67_11800 AYR67_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_11805 PF03466 LysR substrate binding domain AYR67_11820 PF03527 AYR67_11820 AYR67_11820 PF05593 AYR67_11820 AYR67_11820 PF15636 AYR67_11820 AYR67_11825 PF05954 Phage late control gene D protein (GPD) AYR67_11825 PF10106 AYR67_11825 AYR67_11825 PF13296 AYR67_11825 AYR67_11830 PF13354 Beta-lactamase enzyme family AYR67_11835 PF13419 Haloacid dehalogenase-like hydrolase AYR67_11840 PF00583 Acetyltransferase (GNAT) family AYR67_11850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR67_11850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR67_11855 PF08856 AYR67_11855 AYR67_11860 PF07739 TipAS antibiotic-recognition domain AYR67_11860 PF13411 MerR HTH family regulatory protein AYR67_11865 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AYR67_11870 PF07690 Major Facilitator Superfamily AYR67_11875 PF00440 Bacterial regulatory proteins, tetR family AYR67_11880 PF03279 AYR67_11880 AYR67_11885 PF00563 EAL domain AYR67_11890 PF00892 EamA-like transporter family AYR67_11895 PF01037 AsnC family AYR67_11895 PF13404 AsnC-type helix-turn-helix domain AYR67_11900 PF00488 MutS domain V AYR67_11900 PF01624 MutS domain I AYR67_11900 PF05188 MutS domain II AYR67_11900 PF05190 MutS family domain IV AYR67_11900 PF05192 MutS domain III AYR67_11905 PF13673 Acetyltransferase (GNAT) domain AYR67_11910 PF00037 4Fe-4S binding domain AYR67_11910 PF11953 Domain of unknown function (DUF3470) AYR67_11915 PF08291 Peptidase M15 AYR67_11920 PF01596 O-methyltransferase AYR67_11925 PF00582 Universal stress protein family AYR67_11930 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_11930 PF14602 Hexapeptide repeat of succinyl-transferase AYR67_11935 PF01205 Uncharacterized protein family UPF0029 AYR67_11935 PF09186 Domain of unknown function (DUF1949) AYR67_11940 PF13437 HlyD family secretion protein AYR67_11940 PF13533 Biotin-lipoyl like AYR67_11945 PF00005 ABC transporter AYR67_11945 PF00664 ABC transporter transmembrane region AYR67_11950 PF02321 Outer membrane efflux protein AYR67_11955 PF00005 ABC transporter AYR67_11955 PF12399 Branched-chain amino acid ATP-binding cassette transporter AYR67_11960 PF03968 OstA-like protein AYR67_11965 PF06835 Lipopolysaccharide-assembly, LptC-related AYR67_11970 PF08282 haloacid dehalogenase-like hydrolase AYR67_11975 PF00571 CBS domain AYR67_11975 PF01380 SIS domain AYR67_11980 PF01406 tRNA synthetases class I (C) catalytic domain AYR67_11980 PF09190 DALR domain AYR67_11995 PF13628 AYR67_11995 AYR67_12010 PF01638 HxlR-like helix-turn-helix AYR67_12015 PF07690 Major Facilitator Superfamily AYR67_12020 PF04233 AYR67_12020 AYR67_12035 PF03807 NADP oxidoreductase coenzyme F420-dependent AYR67_12035 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYR67_12045 PF00313 'Cold-shock' DNA-binding domain AYR67_12050 PF01810 AYR67_12050 AYR67_12055 PF05838 Glycosyl hydrolase 108 AYR67_12055 PF09374 Predicted Peptidoglycan domain AYR67_12070 PF00717 Peptidase S24-like AYR67_12070 PF01381 Helix-turn-helix AYR67_12085 PF02601 AYR67_12085 AYR67_12085 PF13742 AYR67_12085 AYR67_12090 PF02609 Exonuclease VII small subunit AYR67_12100 PF01810 AYR67_12100 AYR67_12110 PF03860 Domain of Unknown Function (DUF326) AYR67_12115 PF04828 Glutathione-dependent formaldehyde-activating enzyme AYR67_12120 PF00376 MerR family regulatory protein AYR67_12120 PF09278 MerR, DNA binding AYR67_12125 PF00122 E1-E2 ATPase AYR67_12125 PF00403 Heavy-metal-associated domain AYR67_12125 PF00702 haloacid dehalogenase-like hydrolase AYR67_12130 PF00403 Heavy-metal-associated domain AYR67_12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_12135 PF03466 LysR substrate binding domain AYR67_12140 PF00355 Rieske [2Fe-2S] domain AYR67_12140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR67_12145 PF00866 Ring hydroxylating beta subunit AYR67_12150 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR67_12150 PF00175 Oxidoreductase NAD-binding domain AYR67_12150 PF00970 Oxidoreductase FAD-binding domain AYR67_12155 PF00106 short chain dehydrogenase AYR67_12160 PF03594 AYR67_12160 AYR67_12165 PF07690 Major Facilitator Superfamily AYR67_12170 PF03573 outer membrane porin, OprD family AYR67_12175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AYR67_12175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYR67_12180 PF00270 DEAD/DEAH box helicase AYR67_12180 PF00271 Helicase conserved C-terminal domain AYR67_12180 PF04408 Helicase associated domain (HA2) AYR67_12180 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AYR67_12180 PF11898 AYR67_12180 AYR67_12185 PF00578 AhpC/TSA family AYR67_12185 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYR67_12190 PF13619 AYR67_12190 AYR67_12195 PF01596 O-methyltransferase AYR67_12200 PF07866 Protein of unknown function (DUF1653) AYR67_12205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_12205 PF13192 Thioredoxin domain AYR67_12215 PF00043 Glutathione S-transferase, C-terminal domain AYR67_12215 PF02798 Glutathione S-transferase, N-terminal domain AYR67_12220 PF00932 Lamin Tail Domain AYR67_12225 PF02390 Putative methyltransferase AYR67_12230 PF00043 Glutathione S-transferase, C-terminal domain AYR67_12230 PF02798 Glutathione S-transferase, N-terminal domain AYR67_12235 PF03807 NADP oxidoreductase coenzyme F420-dependent AYR67_12235 PF10728 Domain of unknown function (DUF2520) AYR67_12240 PF00691 OmpA family AYR67_12250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYR67_12250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYR67_12260 PF01170 Putative RNA methylase family UPF0020 AYR67_12260 PF02926 THUMP domain AYR67_12260 PF10672 S-adenosylmethionine-dependent methyltransferase AYR67_12270 PF02464 Competence-damaged protein AYR67_12275 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_12275 PF02861 Clp amino terminal domain AYR67_12275 PF07724 AAA domain (Cdc48 subfamily) AYR67_12275 PF10431 C-terminal, D2-small domain, of ClpB protein AYR67_12280 PF01551 Peptidase family M23 AYR67_12285 PF00583 Acetyltransferase (GNAT) family AYR67_12290 PF02566 OsmC-like protein AYR67_12295 PF00027 Cyclic nucleotide-binding domain AYR67_12295 PF00325 Bacterial regulatory proteins, crp family AYR67_12300 PF01609 Transposase DDE domain AYR67_12305 PF01609 Transposase DDE domain AYR67_12310 PF00248 Aldo/keto reductase family AYR67_12315 PF01435 Peptidase family M48 AYR67_12325 PF00709 Adenylosuccinate synthetase AYR67_12330 PF13393 Histidyl-tRNA synthetase AYR67_12335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR67_12335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYR67_12340 PF01411 tRNA synthetases class II (A) AYR67_12340 PF02272 DHHA1 domain AYR67_12340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYR67_12345 PF00696 Amino acid kinase family AYR67_12345 PF01842 ACT domain AYR67_12345 PF13840 ACT domain AYR67_12350 PF02599 Global regulator protein family AYR67_12355 PF01351 Ribonuclease HII AYR67_12365 PF01292 Prokaryotic cytochrome b561 AYR67_12370 PF00962 Adenosine/AMP deaminase AYR67_12375 PF00860 Permease family AYR67_12385 PF13738 Pyridine nucleotide-disulphide oxidoreductase AYR67_12390 PF00106 short chain dehydrogenase AYR67_12395 PF10118 AYR67_12395 AYR67_12400 PF02678 Pirin AYR67_12405 PF00440 Bacterial regulatory proteins, tetR family AYR67_12410 PF13610 AYR67_12410 AYR67_12415 PF01636 Phosphotransferase enzyme family AYR67_12425 PF13610 AYR67_12425 AYR67_12430 PF00239 Resolvase, N terminal domain AYR67_12435 PF01526 AYR67_12435 AYR67_12435 PF13700 AYR67_12435 AYR67_12440 PF13610 AYR67_12440 AYR67_12445 PF13354 Beta-lactamase enzyme family AYR67_12450 PF00239 Resolvase, N terminal domain AYR67_12450 PF02796 Helix-turn-helix domain of resolvase AYR67_12455 PF13610 AYR67_12455 AYR67_12470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR67_12470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_12475 PF00764 Arginosuccinate synthase AYR67_12480 PF00990 GGDEF domain AYR67_12485 PF01979 Amidohydrolase family AYR67_12490 PF00929 Exonuclease AYR67_12500 PF00593 TonB dependent receptor AYR67_12500 PF07715 TonB-dependent Receptor Plug Domain AYR67_12505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR67_12510 PF00005 ABC transporter AYR67_12510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYR67_12515 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_12520 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_12525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYR67_12530 PF01464 Transglycosylase SLT domain AYR67_12530 PF01476 LysM domain AYR67_12535 PF00075 RNase H AYR67_12535 PF00929 Exonuclease AYR67_12545 PF00293 NUDIX domain AYR67_12545 PF09297 NADH pyrophosphatase zinc ribbon domain AYR67_12550 PF07859 alpha/beta hydrolase fold AYR67_12555 PF04972 BON domain AYR67_12560 PF02021 Uncharacterised protein family UPF0102 AYR67_12565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYR67_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_12575 PF03466 LysR substrate binding domain AYR67_12580 PF01810 AYR67_12580 AYR67_12585 PF01545 Cation efflux family AYR67_12590 PF13411 MerR HTH family regulatory protein AYR67_12600 PF01494 FAD binding domain AYR67_12605 PF01494 FAD binding domain AYR67_12610 PF00557 Metallopeptidase family M24 AYR67_12610 PF05195 Aminopeptidase P, N-terminal domain AYR67_12615 PF03695 Uncharacterised protein family (UPF0149) AYR67_12625 PF05164 Cell division protein ZapA AYR67_12635 PF00589 Phage integrase family AYR67_12635 PF13356 Domain of unknown function (DUF4102) AYR67_12650 PF00959 Phage lysozyme AYR67_12655 PF16082 AYR67_12655 AYR67_12680 PF08875 AYR67_12680 AYR67_12705 PF16459 AYR67_12705 AYR67_12710 PF16460 AYR67_12710 AYR67_12715 PF11367 Protein of unknown function (DUF3168) AYR67_12720 PF04883 AYR67_12720 AYR67_12725 PF05521 Phage head-tail joining protein AYR67_12730 PF05135 Phage gp6-like head-tail connector protein AYR67_12735 PF05065 Phage capsid family AYR67_12740 PF04586 AYR67_12740 AYR67_12745 PF04860 Phage portal protein AYR67_12750 PF03354 AYR67_12750 AYR67_12760 PF03592 Terminase small subunit AYR67_12835 PF00772 DnaB-like helicase N terminal domain AYR67_12835 PF03796 DnaB-like helicase C terminal domain AYR67_12840 PF07120 AYR67_12840 AYR67_12855 PF00717 Peptidase S24-like AYR67_12855 PF01381 Helix-turn-helix AYR67_12900 PF00589 Phage integrase family AYR67_12900 PF13356 Domain of unknown function (DUF4102) AYR67_12910 PF00884 Sulfatase AYR67_12910 PF08019 AYR67_12910 AYR67_12915 PF00593 TonB dependent receptor AYR67_12915 PF07715 TonB-dependent Receptor Plug Domain AYR67_12920 PF05838 Glycosyl hydrolase 108 AYR67_12920 PF09374 Predicted Peptidoglycan domain AYR67_12940 PF08875 AYR67_12940 AYR67_12955 PF06120 AYR67_12955 AYR67_12970 PF12844 Helix-turn-helix domain AYR67_12975 PF14076 AYR67_12975 AYR67_13000 PF08239 Bacterial SH3 domain AYR67_13010 PF13554 Bacteriophage related domain of unknown function AYR67_13045 PF12949 HeH/LEM domain AYR67_13060 PF13876 AYR67_13060 AYR67_13070 PF04233 AYR67_13070 AYR67_13075 PF13264 AYR67_13075 AYR67_13080 PF03237 Terminase-like family AYR67_13080 PF17289 AYR67_13080 AYR67_13085 PF10045 AYR67_13085 AYR67_13140 PF04480 Protein of unknown function (DUF559) AYR67_13160 PF04492 AYR67_13160 AYR67_13185 PF00717 Peptidase S24-like AYR67_13185 PF01381 Helix-turn-helix AYR67_13230 PF13479 AYR67_13230 AYR67_13270 PF01812 5-formyltetrahydrofolate cyclo-ligase family AYR67_13275 PF00691 OmpA family AYR67_13275 PF04355 SmpA / OmlA family AYR67_13280 PF03895 YadA-like C-terminal region AYR67_13280 PF05658 Head domain of trimeric autotransporter adhesin AYR67_13280 PF05662 Coiled stalk of trimeric autotransporter adhesin AYR67_13280 PF13018 AYR67_13280 AYR67_13285 PF00004 ATPase family associated with various cellular activities (AAA) AYR67_13285 PF02190 ATP-dependent protease La (LON) domain AYR67_13285 PF05362 Lon protease (S16) C-terminal proteolytic domain AYR67_13290 PF02590 Predicted SPOUT methyltransferase AYR67_13295 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AYR67_13300 PF03724 META domain AYR67_13300 PF14302 AYR67_13300 AYR67_13305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR67_13305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYR67_13310 PF04060 Putative Fe-S cluster AYR67_13310 PF14697 4Fe-4S dicluster domain AYR67_13315 PF00633 Helix-hairpin-helix motif AYR67_13315 PF00730 HhH-GPD superfamily base excision DNA repair protein AYR67_13315 PF10576 Iron-sulfur binding domain of endonuclease III AYR67_13320 PF00406 Adenylate kinase AYR67_13320 PF05191 Adenylate kinase, active site lid AYR67_13335 PF00905 Penicillin binding protein transpeptidase domain AYR67_13335 PF03717 Penicillin-binding Protein dimerisation domain AYR67_13340 PF03602 Conserved hypothetical protein 95 AYR67_13345 PF04955 AYR67_13345 AYR67_13350 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYR67_13355 PF01730 UreF AYR67_13360 PF02814 UreE urease accessory protein, N-terminal domain AYR67_13360 PF05194 UreE urease accessory protein, C-terminal domain AYR67_13365 PF00449 Urease alpha-subunit, N-terminal domain AYR67_13365 PF01979 Amidohydrolase family AYR67_13370 PF00699 Urease beta subunit AYR67_13375 PF00547 Urease, gamma subunit AYR67_13380 PF01774 UreD urease accessory protein AYR67_13390 PF04170 NlpE N-terminal domain AYR67_13395 PF00463 Isocitrate lyase family AYR67_13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_13400 PF03466 LysR substrate binding domain AYR67_13405 PF00571 CBS domain AYR67_13405 PF01595 AYR67_13405 AYR67_13405 PF03471 Transporter associated domain AYR67_13415 PF03600 Citrate transporter AYR67_13425 PF09998 AYR67_13425 AYR67_13430 PF00009 Elongation factor Tu GTP binding domain AYR67_13435 PF01507 Phosphoadenosine phosphosulfate reductase family AYR67_13440 PF01609 Transposase DDE domain AYR67_13445 PF01609 Transposase DDE domain AYR67_13450 PF14052 Capsule assembly protein Wzi AYR67_13455 PF00152 tRNA synthetases class II (D, K and N) AYR67_13455 PF01336 OB-fold nucleic acid binding domain AYR67_13460 PF05728 Uncharacterised protein family (UPF0227) AYR67_13465 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AYR67_13470 PF00301 Rubredoxin AYR67_13475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_13480 PF00561 alpha/beta hydrolase fold AYR67_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_13485 PF03466 LysR substrate binding domain AYR67_13490 PF05036 Sporulation related domain AYR67_13495 PF02503 Polyphosphate kinase middle domain AYR67_13495 PF13089 Polyphosphate kinase N-terminal domain AYR67_13495 PF13090 Polyphosphate kinase C-terminal domain AYR67_13500 PF00912 Transglycosylase AYR67_13505 PF01694 Rhomboid family AYR67_13510 PF02687 AYR67_13510 AYR67_13515 PF00005 ABC transporter AYR67_13520 PF13472 GDSL-like Lipase/Acylhydrolase family AYR67_13525 PF00484 Carbonic anhydrase AYR67_13530 PF12697 Alpha/beta hydrolase family AYR67_13540 PF00593 TonB dependent receptor AYR67_13540 PF07715 TonB-dependent Receptor Plug Domain AYR67_13545 PF01106 NifU-like domain AYR67_13545 PF01521 Iron-sulphur cluster biosynthesis AYR67_13550 PF01694 Rhomboid family AYR67_13555 PF00884 Sulfatase AYR67_13560 PF03781 Sulfatase-modifying factor enzyme 1 AYR67_13575 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_13580 PF01384 AYR67_13580 AYR67_13590 PF04245 AYR67_13590 AYR67_13600 PF00436 Single-strand binding protein family AYR67_13605 PF06048 AYR67_13605 AYR67_13625 PF02498 AYR67_13625 AYR67_13630 PF14090 AYR67_13630 AYR67_13645 PF00589 Phage integrase family AYR67_13645 PF13356 Domain of unknown function (DUF4102) AYR67_13655 PF01019 Gamma-glutamyltranspeptidase AYR67_13660 PF07690 Major Facilitator Superfamily AYR67_13665 PF00529 HlyD family secretion protein AYR67_13665 PF16576 AYR67_13665 AYR67_13670 PF03061 Thioesterase superfamily AYR67_13675 PF00490 Delta-aminolevulinic acid dehydratase AYR67_13680 PF01266 FAD dependent oxidoreductase AYR67_13685 PF01370 NAD dependent epimerase/dehydratase family AYR67_13685 PF08338 Domain of unknown function (DUF1731) AYR67_13700 PF02566 OsmC-like protein AYR67_13705 PF00149 Calcineurin-like phosphoesterase AYR67_13705 PF12320 Type 5 capsule protein repressor C-terminal domain AYR67_13710 PF13476 AAA domain AYR67_13710 PF13558 Putative exonuclease SbcCD, C subunit AYR67_13715 PF01168 Alanine racemase, N-terminal domain AYR67_13720 PF00437 Type II/IV secretion system protein AYR67_13725 PF00437 Type II/IV secretion system protein AYR67_13730 PF01475 Ferric uptake regulator family AYR67_13735 PF04355 SmpA / OmlA family AYR67_13740 PF03658 RnfH family Ubiquitin AYR67_13755 PF01814 Hemerythrin HHE cation binding domain AYR67_13760 PF13230 Glutamine amidotransferases class-II AYR67_13765 PF13444 Acetyltransferase (GNAT) domain AYR67_13770 PF00696 Amino acid kinase family AYR67_13775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR67_13775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR67_13775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR67_13780 PF00692 dUTPase AYR67_13785 PF00580 UvrD/REP helicase N-terminal domain AYR67_13785 PF13361 UvrD-like helicase C-terminal domain AYR67_13790 PF00691 OmpA family AYR67_13795 PF01553 Acyltransferase AYR67_13805 PF03775 Septum formation inhibitor MinC, C-terminal domain AYR67_13810 PF13614 AAA domain AYR67_13815 PF03776 Septum formation topological specificity factor MinE AYR67_13830 PF01810 AYR67_13830 AYR67_13835 PF01580 FtsK/SpoIIIE family AYR67_13835 PF09397 Ftsk gamma domain AYR67_13835 PF13491 AYR67_13835 AYR67_13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR67_13845 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AYR67_13850 PF04376 AYR67_13850 AYR67_13850 PF04377 AYR67_13850 AYR67_13855 PF00583 Acetyltransferase (GNAT) family AYR67_13860 PF10118 AYR67_13860 AYR67_13865 PF10118 AYR67_13865 AYR67_13870 PF00009 Elongation factor Tu GTP binding domain AYR67_13870 PF03143 Elongation factor Tu C-terminal domain AYR67_13870 PF03144 Elongation factor Tu domain 2 AYR67_13875 PF00009 Elongation factor Tu GTP binding domain AYR67_13875 PF00679 Elongation factor G C-terminus AYR67_13875 PF03144 Elongation factor Tu domain 2 AYR67_13875 PF03764 Elongation factor G, domain IV AYR67_13875 PF14492 Elongation Factor G, domain II AYR67_13880 PF00177 Ribosomal protein S7p/S5e AYR67_13885 PF00164 Ribosomal protein S12/S23 AYR67_13890 PF12787 AYR67_13890 AYR67_13895 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR67_13895 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR67_13900 PF03653 AYR67_13900 AYR67_13905 PF02678 Pirin AYR67_13905 PF05726 Pirin C-terminal cupin domain AYR67_13915 PF00795 Carbon-nitrogen hydrolase AYR67_13915 PF02540 NAD synthase AYR67_13930 PF00111 2Fe-2S iron-sulfur cluster binding domain AYR67_13930 PF00175 Oxidoreductase NAD-binding domain AYR67_13930 PF00970 Oxidoreductase FAD-binding domain AYR67_13935 PF00171 Aldehyde dehydrogenase family AYR67_13940 PF00355 Rieske [2Fe-2S] domain AYR67_13940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYR67_13945 PF07859 alpha/beta hydrolase fold AYR67_13950 PF02028 BCCT family transporter AYR67_13955 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR67_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_13960 PF03466 LysR substrate binding domain AYR67_13965 PF07396 Phosphate-selective porin O and P AYR67_13980 PF00037 4Fe-4S binding domain AYR67_13985 PF01467 Cytidylyltransferase AYR67_13990 PF01668 SmpB protein AYR67_13995 PF03358 NADPH-dependent FMN reductase AYR67_14000 PF02578 Multi-copper polyphenol oxidoreductase laccase AYR67_14005 PF00849 RNA pseudouridylate synthase AYR67_14005 PF01479 S4 domain AYR67_14010 PF13525 Outer membrane lipoprotein AYR67_14015 PF01807 CHC2 zinc finger AYR67_14015 PF08275 DNA primase catalytic core, N-terminal domain AYR67_14015 PF10410 DnaB-helicase binding domain of primase AYR67_14015 PF13662 Toprim domain AYR67_14020 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AYR67_14020 PF01488 Shikimate / quinate 5-dehydrogenase AYR67_14020 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AYR67_14025 PF13181 Tetratricopeptide repeat AYR67_14025 PF14559 Tetratricopeptide repeat AYR67_14030 PF03550 Outer membrane lipoprotein LolB AYR67_14035 PF00288 GHMP kinases N terminal domain AYR67_14035 PF08544 GHMP kinases C terminal AYR67_14060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYR67_14060 PF14572 Phosphoribosyl synthetase-associated domain AYR67_14065 PF01386 Ribosomal L25p family AYR67_14070 PF01195 Peptidyl-tRNA hydrolase AYR67_14075 PF02261 Aspartate decarboxylase AYR67_14080 PF14345 AYR67_14080 AYR67_14085 PF09925 AYR67_14085 AYR67_14085 PF14351 AYR67_14085 AYR67_14090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYR67_14095 PF13419 Haloacid dehalogenase-like hydrolase AYR67_14100 PF08543 Phosphomethylpyrimidine kinase AYR67_14105 PF01476 LysM domain AYR67_14105 PF04972 BON domain AYR67_14110 PF00550 Phosphopantetheine attachment site AYR67_14115 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_14120 PF00698 Acyl transferase domain AYR67_14125 PF01783 Ribosomal L32p protein family AYR67_14130 PF02620 AYR67_14130 AYR67_14135 PF04315 AYR67_14135 AYR67_14140 PF01300 Telomere recombination AYR67_14145 PF02616 ScpA/B protein AYR67_14150 PF04079 Putative transcriptional regulators (Ypuh-like) AYR67_14155 PF00849 RNA pseudouridylate synthase AYR67_14155 PF01479 S4 domain AYR67_14160 PF13500 AAA domain AYR67_14165 PF13489 Methyltransferase domain AYR67_14170 PF00155 Aminotransferase class I and II AYR67_14175 PF00202 Aminotransferase class-III AYR67_14185 PF02358 Trehalose-phosphatase AYR67_14190 PF00982 Glycosyltransferase family 20 AYR67_14195 PF07690 Major Facilitator Superfamily AYR67_14200 PF00210 Ferritin-like domain AYR67_14205 PF00533 BRCA1 C Terminus (BRCT) domain AYR67_14205 PF01653 NAD-dependent DNA ligase adenylation domain AYR67_14205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AYR67_14205 PF03120 NAD-dependent DNA ligase OB-fold domain AYR67_14205 PF12826 Helix-hairpin-helix motif AYR67_14205 PF14520 Helix-hairpin-helix domain AYR67_14210 PF04354 ZipA, C-terminal FtsZ-binding domain AYR67_14215 PF02463 RecF/RecN/SMC N terminal domain AYR67_14220 PF00392 Bacterial regulatory proteins, gntR family AYR67_14220 PF07729 FCD domain AYR67_14225 PF01925 AYR67_14225 AYR67_14230 PF03099 Biotin/lipoate A/B protein ligase family AYR67_14235 PF03309 Type III pantothenate kinase AYR67_14240 PF00448 SRP54-type protein, GTPase domain AYR67_14240 PF02881 SRP54-type protein, helical bundle domain AYR67_14240 PF02978 Signal peptide binding domain AYR67_14245 PF01578 AYR67_14245 AYR67_14250 PF01207 Dihydrouridine synthase (Dus) AYR67_14280 PF00692 dUTPase AYR67_14285 PF01810 AYR67_14285 AYR67_14290 PF09835 AYR67_14290 AYR67_14295 PF01048 Phosphorylase superfamily AYR67_14300 PF10609 ParA/MinD ATPase like AYR67_14310 PF01588 Putative tRNA binding domain AYR67_14310 PF08264 Anticodon-binding domain of tRNA AYR67_14310 PF09334 tRNA synthetases class I (M) AYR67_14320 PF01810 AYR67_14320 AYR67_14325 PF00440 Bacterial regulatory proteins, tetR family AYR67_14330 PF07690 Major Facilitator Superfamily AYR67_14335 PF13437 HlyD family secretion protein AYR67_14335 PF13533 Biotin-lipoyl like AYR67_14340 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_14345 PF03486 HI0933-like protein AYR67_14355 PF05552 Conserved TM helix AYR67_14370 PF00175 Oxidoreductase NAD-binding domain AYR67_14370 PF00970 Oxidoreductase FAD-binding domain AYR67_14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_14375 PF03466 LysR substrate binding domain AYR67_14380 PF00313 'Cold-shock' DNA-binding domain AYR67_14385 PF14681 Uracil phosphoribosyltransferase AYR67_14390 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AYR67_14395 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AYR67_14400 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AYR67_14400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYR67_14405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYR67_14410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AYR67_14415 PF12838 4Fe-4S dicluster domain AYR67_14420 PF00146 NADH dehydrogenase AYR67_14425 PF00384 Molybdopterin oxidoreductase AYR67_14425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYR67_14425 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYR67_14425 PF13510 2Fe-2S iron-sulfur cluster binding domain AYR67_14430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AYR67_14430 PF10531 SLBB domain AYR67_14430 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AYR67_14435 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AYR67_14440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AYR67_14440 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AYR67_14445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AYR67_14450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AYR67_14455 PF00990 GGDEF domain AYR67_14465 PF00512 His Kinase A (phospho-acceptor) domain AYR67_14465 PF00672 HAMP domain AYR67_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_14470 PF00072 Response regulator receiver domain AYR67_14470 PF00486 Transcriptional regulatory protein, C terminal AYR67_14480 PF00317 Ribonucleotide reductase, all-alpha domain AYR67_14480 PF02867 Ribonucleotide reductase, barrel domain AYR67_14480 PF03477 ATP cone domain AYR67_14490 PF00268 Ribonucleotide reductase, small chain AYR67_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_14500 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_14510 PF01507 Phosphoadenosine phosphosulfate reductase family AYR67_14520 PF13182 AYR67_14520 AYR67_14530 PF08722 TnsA endonuclease N terminal AYR67_14535 PF00665 Integrase core domain AYR67_14535 PF09299 Mu transposase, C-terminal AYR67_14540 PF05621 AYR67_14540 AYR67_14545 PF06527 AYR67_14545 AYR67_14570 PF01011 PQQ enzyme repeat AYR67_14570 PF13360 PQQ-like domain AYR67_14590 PF02567 Phenazine biosynthesis-like protein AYR67_14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_14595 PF03466 LysR substrate binding domain AYR67_14605 PF04471 Restriction endonuclease AYR67_14605 PF13401 AAA domain AYR67_14610 PF00440 Bacterial regulatory proteins, tetR family AYR67_14615 PF01613 Flavin reductase like domain AYR67_14620 PF01717 Cobalamin-independent synthase, Catalytic domain AYR67_14625 PF08908 AYR67_14625 AYR67_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_14630 PF03466 LysR substrate binding domain AYR67_14635 PF01810 AYR67_14635 AYR67_14645 PF01609 Transposase DDE domain AYR67_14650 PF01609 Transposase DDE domain AYR67_14655 PF12625 AYR67_14655 AYR67_14655 PF12833 Helix-turn-helix domain AYR67_14660 PF01546 Peptidase family M20/M25/M40 AYR67_14660 PF07687 Peptidase dimerisation domain AYR67_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_14670 PF03466 LysR substrate binding domain AYR67_14675 PF07690 Major Facilitator Superfamily AYR67_14680 PF13531 Bacterial extracellular solute-binding protein AYR67_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_14685 PF03466 LysR substrate binding domain AYR67_14690 PF00890 FAD binding domain AYR67_14700 PF02515 CoA-transferase family III AYR67_14705 PF07690 Major Facilitator Superfamily AYR67_14710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_14710 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_14710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_14715 PF03466 LysR substrate binding domain AYR67_14720 PF00107 Zinc-binding dehydrogenase AYR67_14720 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_14725 PF00962 Adenosine/AMP deaminase AYR67_14750 PF02445 Quinolinate synthetase A protein AYR67_14755 PF01960 ArgJ family AYR67_14760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR67_14760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYR67_14765 PF00893 Small Multidrug Resistance protein AYR67_14770 PF01545 Cation efflux family AYR67_14775 PF05275 AYR67_14775 AYR67_14780 PF00394 Multicopper oxidase AYR67_14780 PF07731 Multicopper oxidase AYR67_14780 PF07732 Multicopper oxidase AYR67_14790 PF08282 haloacid dehalogenase-like hydrolase AYR67_14795 PF00834 Ribulose-phosphate 3 epimerase family AYR67_14800 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) AYR67_14805 PF00756 Putative esterase AYR67_14810 PF01650 Peptidase C13 family AYR67_14815 PF04445 Putative SAM-dependent methyltransferase AYR67_14820 PF00814 Glycoprotease family AYR67_14825 PF00132 Bacterial transferase hexapeptide (six repeats) AYR67_14830 PF00293 NUDIX domain AYR67_14835 PF00293 NUDIX domain AYR67_14835 PF14803 Nudix N-terminal AYR67_14850 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AYR67_14860 PF03412 Peptidase C39 family AYR67_14875 PF00425 chorismate binding enzyme AYR67_14875 PF04715 Anthranilate synthase component I, N terminal region AYR67_14880 PF00155 Aminotransferase class I and II AYR67_14885 PF00815 Histidinol dehydrogenase AYR67_14890 PF01634 ATP phosphoribosyltransferase AYR67_14895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR67_14900 PF01722 BolA-like protein AYR67_14905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AYR67_14910 PF00309 AYR67_14910 AYR67_14910 PF04552 Sigma-54, DNA binding domain AYR67_14910 PF04963 Sigma-54 factor, core binding domain AYR67_14940 PF04333 AYR67_14940 AYR67_14945 PF07228 Stage II sporulation protein E (SpoIIE) AYR67_14950 PF01740 STAS domain AYR67_14955 PF00795 Carbon-nitrogen hydrolase AYR67_14960 PF16309 AYR67_14960 AYR67_14965 PF01047 MarR family AYR67_14970 PF02566 OsmC-like protein AYR67_14975 PF00437 Type II/IV secretion system protein AYR67_14985 PF00924 Mechanosensitive ion channel AYR67_14990 PF10101 AYR67_14990 AYR67_14995 PF01609 Transposase DDE domain AYR67_15000 PF01609 Transposase DDE domain AYR67_15010 PF00476 DNA polymerase family A AYR67_15010 PF01367 5'-3' exonuclease, C-terminal SAM fold AYR67_15010 PF01612 3'-5' exonuclease AYR67_15010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYR67_15015 PF02325 AYR67_15015 AYR67_15020 PF03807 NADP oxidoreductase coenzyme F420-dependent AYR67_15020 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYR67_15025 PF01171 PP-loop family AYR67_15025 PF09179 TilS substrate binding domain AYR67_15025 PF11734 TilS substrate C-terminal domain AYR67_15030 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AYR67_15035 PF01966 HD domain AYR67_15035 PF02541 Ppx/GppA phosphatase family AYR67_15040 PF00085 Thioredoxin AYR67_15045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR67_15045 PF07497 Rho termination factor, RNA-binding domain AYR67_15045 PF07498 Rho termination factor, N-terminal domain AYR67_15055 PF00216 Bacterial DNA-binding protein AYR67_15060 PF01588 Putative tRNA binding domain AYR67_15060 PF03147 Ferredoxin-fold anticodon binding domain AYR67_15060 PF03483 B3/4 domain AYR67_15060 PF03484 tRNA synthetase B5 domain AYR67_15065 PF01409 tRNA synthetases class II core domain (F) AYR67_15065 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYR67_15075 PF00583 Acetyltransferase (GNAT) family AYR67_15080 PF08719 Domain of unknown function (DUF1768) AYR67_15085 PF00453 Ribosomal protein L20 AYR67_15090 PF01632 Ribosomal protein L35 AYR67_15095 PF05977 Transmembrane secretion effector AYR67_15100 PF09335 AYR67_15100 AYR67_15105 PF00043 Glutathione S-transferase, C-terminal domain AYR67_15105 PF02798 Glutathione S-transferase, N-terminal domain AYR67_15110 PF00707 Translation initiation factor IF-3, C-terminal domain AYR67_15110 PF05198 Translation initiation factor IF-3, N-terminal domain AYR67_15115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR67_15115 PF02824 TGS domain AYR67_15115 PF03129 Anticodon binding domain AYR67_15115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYR67_15120 PF00501 AMP-binding enzyme AYR67_15120 PF13193 AMP-binding enzyme C-terminal domain AYR67_15125 PF04751 Protein of unknown function (DUF615) AYR67_15130 PF00381 PTS HPr component phosphorylation site AYR67_15135 PF03668 AYR67_15135 AYR67_15140 PF02569 Pantoate-beta-alanine ligase AYR67_15145 PF02548 Ketopantoate hydroxymethyltransferase AYR67_15150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYR67_15155 PF01743 Poly A polymerase head domain AYR67_15155 PF12626 Polymerase A arginine-rich C-terminus AYR67_15155 PF12627 Probable RNA and SrmB- binding site of polymerase A AYR67_15160 PF12836 Helix-hairpin-helix motif AYR67_15165 PF03819 MazG nucleotide pyrophosphohydrolase domain AYR67_15170 PF00106 short chain dehydrogenase AYR67_15175 PF02824 TGS domain AYR67_15175 PF04607 Region found in RelA / SpoT proteins AYR67_15175 PF13291 ACT domain AYR67_15175 PF13328 HD domain AYR67_15180 PF05958 tRNA (Uracil-5-)-methyltransferase AYR67_15185 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AYR67_15190 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_15195 PF00072 Response regulator receiver domain AYR67_15195 PF00512 His Kinase A (phospho-acceptor) domain AYR67_15195 PF01627 Hpt domain AYR67_15195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_15200 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_15205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR67_15205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR67_15210 PF01261 Xylose isomerase-like TIM barrel AYR67_15215 PF02410 Oligomerisation domain AYR67_15220 PF00106 short chain dehydrogenase AYR67_15225 PF02233 NAD(P) transhydrogenase beta subunit AYR67_15230 PF12769 Domain of unknown function (DUF3814) AYR67_15235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AYR67_15235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AYR67_15240 PF00892 EamA-like transporter family AYR67_15245 PF01042 Endoribonuclease L-PSP AYR67_15250 PF07690 Major Facilitator Superfamily AYR67_15255 PF01207 Dihydrouridine synthase (Dus) AYR67_15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_15265 PF03466 LysR substrate binding domain AYR67_15270 PF00899 ThiF family AYR67_15275 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AYR67_15280 PF00330 Aconitase family (aconitate hydratase) AYR67_15280 PF00694 Aconitase C-terminal domain AYR67_15285 PF01026 TatD related DNase AYR67_15290 PF11738 Protein of unknown function (DUF3298) AYR67_15300 PF00009 Elongation factor Tu GTP binding domain AYR67_15300 PF16658 AYR67_15300 AYR67_15310 PF00440 Bacterial regulatory proteins, tetR family AYR67_15315 PF00440 Bacterial regulatory proteins, tetR family AYR67_15320 PF00563 EAL domain AYR67_15320 PF00990 GGDEF domain AYR67_15325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AYR67_15325 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AYR67_15330 PF10369 Small subunit of acetolactate synthase AYR67_15330 PF13710 ACT domain AYR67_15335 PF00205 Thiamine pyrophosphate enzyme, central domain AYR67_15335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR67_15335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR67_15340 PF13511 AYR67_15340 AYR67_15345 PF00133 tRNA synthetases class I (I, L, M and V) AYR67_15345 PF08264 Anticodon-binding domain of tRNA AYR67_15345 PF09334 tRNA synthetases class I (M) AYR67_15345 PF13603 Leucyl-tRNA synthetase, Domain 2 AYR67_15355 PF06144 DNA polymerase III, delta subunit AYR67_15360 PF16576 AYR67_15360 AYR67_15365 PF00005 ABC transporter AYR67_15365 PF02687 AYR67_15365 AYR67_15365 PF12704 MacB-like periplasmic core domain AYR67_15370 PF02321 Outer membrane efflux protein AYR67_15375 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_15380 PF12811 AYR67_15380 AYR67_15385 PF00929 Exonuclease AYR67_15390 PF03193 Protein of unknown function, DUF258 AYR67_15395 PF00581 Rhodanese-like domain AYR67_15400 PF00462 Glutaredoxin AYR67_15405 PF02556 Preprotein translocase subunit SecB AYR67_15410 PF01648 4'-phosphopantetheinyl transferase superfamily AYR67_15420 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR67_15420 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR67_15425 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_15435 PF00109 Beta-ketoacyl synthase, N-terminal domain AYR67_15435 PF02801 Beta-ketoacyl synthase, C-terminal domain AYR67_15440 PF11659 AYR67_15440 AYR67_15445 PF01494 FAD binding domain AYR67_15455 PF03548 Outer membrane lipoprotein carrier protein LolA AYR67_15460 PF13279 Thioesterase-like superfamily AYR67_15465 PF00221 Aromatic amino acid lyase AYR67_15470 PF03279 AYR67_15470 AYR67_15475 PF00535 Glycosyl transferase family 2 AYR67_15480 PF00501 AMP-binding enzyme AYR67_15480 PF13193 AMP-binding enzyme C-terminal domain AYR67_15485 PF04279 AYR67_15485 AYR67_15490 PF00550 Phosphopantetheine attachment site AYR67_15495 PF00550 Phosphopantetheine attachment site AYR67_15500 PF01553 Acyltransferase AYR67_15505 PF13723 AYR67_15505 AYR67_15510 PF01926 50S ribosome-binding GTPase AYR67_15510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYR67_15515 PF13360 PQQ-like domain AYR67_15520 PF09976 Tetratricopeptide repeat AYR67_15525 PF03129 Anticodon binding domain AYR67_15525 PF13393 Histidyl-tRNA synthetase AYR67_15530 PF04551 GcpE protein AYR67_15535 PF13413 Helix-turn-helix domain AYR67_15535 PF13464 AYR67_15535 AYR67_15540 PF13432 Tetratricopeptide repeat AYR67_15545 PF04055 Radical SAM superfamily AYR67_15550 PF00334 Nucleoside diphosphate kinase AYR67_15555 PF04384 Iron-sulphur cluster assembly AYR67_15560 PF01569 PAP2 superfamily AYR67_15565 PF00534 Glycosyl transferases group 1 AYR67_15565 PF13439 Glycosyltransferase Family 4 AYR67_15570 PF00595 PDZ domain (Also known as DHR or GLGF) AYR67_15570 PF03572 Peptidase family S41 AYR67_15570 PF11818 AYR67_15570 AYR67_15575 PF00933 Glycosyl hydrolase family 3 N terminal domain AYR67_15580 PF04072 Leucine carboxyl methyltransferase AYR67_15585 PF00561 alpha/beta hydrolase fold AYR67_15590 PF00171 Aldehyde dehydrogenase family AYR67_15595 PF00171 Aldehyde dehydrogenase family AYR67_15600 PF01202 Shikimate kinase AYR67_15605 PF02447 AYR67_15605 AYR67_15610 PF01081 KDPG and KHG aldolase AYR67_15615 PF00920 Dehydratase family AYR67_15620 PF01609 Transposase DDE domain AYR67_15625 PF01609 Transposase DDE domain AYR67_15630 PF00871 Acetokinase family AYR67_15635 PF01515 Phosphate acetyl/butaryl transferase AYR67_15635 PF07085 DRTGG domain AYR67_15635 PF13500 AAA domain AYR67_15640 PF05681 AYR67_15640 AYR67_15640 PF05683 Fumarase C-terminus AYR67_15645 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AYR67_15650 PF11008 AYR67_15650 AYR67_15655 PF06689 ClpX C4-type zinc finger AYR67_15655 PF07724 AAA domain (Cdc48 subfamily) AYR67_15655 PF10431 C-terminal, D2-small domain, of ClpB protein AYR67_15660 PF00574 Clp protease AYR67_15665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR67_15665 PF05697 Bacterial trigger factor protein (TF) AYR67_15665 PF05698 Bacterial trigger factor protein (TF) C-terminus AYR67_15675 PF13640 2OG-Fe(II) oxygenase superfamily AYR67_15680 PF00682 HMGL-like AYR67_15680 PF08502 LeuA allosteric (dimerisation) domain AYR67_15685 PF00561 alpha/beta hydrolase fold AYR67_15690 PF07021 Methionine biosynthesis protein MetW AYR67_15695 PF08238 Sel1 repeat AYR67_15700 PF01725 Ham1 family AYR67_15710 PF02416 mttA/Hcf106 family AYR67_15715 PF02416 mttA/Hcf106 family AYR67_15720 PF00902 Sec-independent protein translocase protein (TatC) AYR67_15725 PF05787 Bacterial protein of unknown function (DUF839) AYR67_15730 PF05787 Bacterial protein of unknown function (DUF839) AYR67_15735 PF05742 AYR67_15735 AYR67_15740 PF01790 AYR67_15740 AYR67_15755 PF00303 Thymidylate synthase AYR67_15760 PF00186 Dihydrofolate reductase AYR67_15765 PF13387 AYR67_15765 AYR67_15770 PF01625 Peptide methionine sulfoxide reductase AYR67_15775 PF02472 Biopolymer transport protein ExbD/TolR AYR67_15780 PF01618 AYR67_15780 AYR67_15785 PF03544 Gram-negative bacterial TonB protein C-terminal AYR67_15790 PF00551 Formyl transferase AYR67_15790 PF01842 ACT domain AYR67_15795 PF00440 Bacterial regulatory proteins, tetR family AYR67_15795 PF13972 Bacterial transcriptional repressor AYR67_15800 PF00171 Aldehyde dehydrogenase family AYR67_15805 PF00830 Ribosomal L28 family AYR67_15810 PF00471 Ribosomal protein L33 AYR67_15815 PF00999 Sodium/hydrogen exchanger family AYR67_15815 PF02254 TrkA-N domain AYR67_15835 PF00076 RNA recognition motif AYR67_15840 PF00580 UvrD/REP helicase N-terminal domain AYR67_15840 PF13361 UvrD-like helicase C-terminal domain AYR67_15845 PF03729 AYR67_15845 AYR67_15855 PF01131 DNA topoisomerase AYR67_15855 PF01396 AYR67_15855 AYR67_15855 PF01751 Toprim domain AYR67_15855 PF08272 Topoisomerase I zinc-ribbon-like AYR67_15865 PF01638 HxlR-like helix-turn-helix AYR67_15870 PF08240 Alcohol dehydrogenase GroES-like domain AYR67_15870 PF13602 Zinc-binding dehydrogenase AYR67_15875 PF04102 SlyX AYR67_15880 PF00005 ABC transporter AYR67_15880 PF12848 ABC transporter AYR67_15880 PF16326 AYR67_15880 AYR67_15885 PF01810 AYR67_15885 AYR67_15890 PF03279 AYR67_15890 AYR67_15895 PF00534 Glycosyl transferases group 1 AYR67_15895 PF13439 Glycosyltransferase Family 4 AYR67_15900 PF00375 Sodium:dicarboxylate symporter family AYR67_15905 PF03372 Endonuclease/Exonuclease/phosphatase family AYR67_15910 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR67_15910 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYR67_15925 PF00710 Asparaginase AYR67_15930 PF01416 tRNA pseudouridine synthase AYR67_15935 PF12625 AYR67_15935 AYR67_15935 PF12833 Helix-turn-helix domain AYR67_15940 PF01176 Translation initiation factor 1A / IF-1 AYR67_15945 PF07007 Protein of unknown function (DUF1311) AYR67_15955 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR67_15965 PF00694 Aconitase C-terminal domain AYR67_15970 PF00330 Aconitase family (aconitate hydratase) AYR67_15975 PF09834 AYR67_15975 AYR67_15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_15980 PF03466 LysR substrate binding domain AYR67_15995 PF12710 haloacid dehalogenase-like hydrolase AYR67_16000 PF00293 NUDIX domain AYR67_16005 PF00391 PEP-utilising enzyme, mobile domain AYR67_16005 PF02896 PEP-utilising enzyme, TIM barrel domain AYR67_16005 PF05524 PEP-utilising enzyme, N-terminal AYR67_16005 PF13185 GAF domain AYR67_16010 PF00141 Peroxidase AYR67_16015 PF12706 Beta-lactamase superfamily domain AYR67_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_16020 PF03466 LysR substrate binding domain AYR67_16025 PF07077 AYR67_16025 AYR67_16030 PF02798 Glutathione S-transferase, N-terminal domain AYR67_16030 PF14497 Glutathione S-transferase, C-terminal domain AYR67_16035 PF08279 HTH domain AYR67_16035 PF13280 AYR67_16035 AYR67_16040 PF13419 Haloacid dehalogenase-like hydrolase AYR67_16045 PF00849 RNA pseudouridylate synthase AYR67_16045 PF01479 S4 domain AYR67_16050 PF00575 S1 RNA binding domain AYR67_16050 PF10150 Ribonuclease E/G family AYR67_16055 PF00501 AMP-binding enzyme AYR67_16055 PF13193 AMP-binding enzyme C-terminal domain AYR67_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_16070 PF03466 LysR substrate binding domain AYR67_16075 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_16080 PF04055 Radical SAM superfamily AYR67_16080 PF06969 HemN C-terminal domain AYR67_16085 PF04657 AYR67_16085 AYR67_16090 PF01554 MatE AYR67_16095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR67_16100 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_16100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_16100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYR67_16105 PF03109 AYR67_16105 AYR67_16110 PF01197 Ribosomal protein L31 AYR67_16115 PF08888 HopJ type III effector protein AYR67_16120 PF02537 AYR67_16120 AYR67_16125 PF04828 Glutathione-dependent formaldehyde-activating enzyme AYR67_16130 PF03486 HI0933-like protein AYR67_16135 PF02390 Putative methyltransferase AYR67_16140 PF03884 Domain of unknown function (DUF329) AYR67_16145 PF00753 Metallo-beta-lactamase superfamily AYR67_16150 PF00762 Ferrochelatase AYR67_16155 PF13271 AYR67_16155 AYR67_16160 PF01177 Asp/Glu/Hydantoin racemase AYR67_16165 PF06938 Protein of unknown function (DUF1285) AYR67_16170 PF01946 Thi4 family AYR67_16170 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AYR67_16175 PF01206 Sulfurtransferase TusA AYR67_16180 PF00571 CBS domain AYR67_16180 PF03471 Transporter associated domain AYR67_16185 PF00795 Carbon-nitrogen hydrolase AYR67_16190 PF01588 Putative tRNA binding domain AYR67_16200 PF07963 Prokaryotic N-terminal methylation motif AYR67_16200 PF08334 Type II secretion system (T2SS), protein G AYR67_16205 PF00482 Type II secretion system (T2SS), protein F AYR67_16210 PF00271 Helicase conserved C-terminal domain AYR67_16210 PF04851 Type III restriction enzyme, res subunit AYR67_16215 PF00999 Sodium/hydrogen exchanger family AYR67_16215 PF02254 TrkA-N domain AYR67_16220 PF01430 Hsp33 protein AYR67_16225 PF01810 AYR67_16225 AYR67_16230 PF00226 DnaJ domain AYR67_16230 PF01556 DnaJ C terminal domain AYR67_16235 PF13591 MerR HTH family regulatory protein AYR67_16240 PF01544 CorA-like Mg2+ transporter protein AYR67_16245 PF00013 KH domain AYR67_16245 PF00575 S1 RNA binding domain AYR67_16245 PF01138 3' exoribonuclease family, domain 1 AYR67_16245 PF03725 3' exoribonuclease family, domain 2 AYR67_16245 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AYR67_16250 PF00312 Ribosomal protein S15 AYR67_16255 PF00144 Beta-lactamase AYR67_16260 PF13538 UvrD-like helicase C-terminal domain AYR67_16260 PF13604 AAA domain AYR67_16265 PF00580 UvrD/REP helicase N-terminal domain AYR67_16265 PF12705 PD-(D/E)XK nuclease superfamily AYR67_16265 PF13361 UvrD-like helicase C-terminal domain AYR67_16270 PF04257 Exodeoxyribonuclease V, gamma subunit AYR67_16280 PF03976 Polyphosphate kinase 2 (PPK2) AYR67_16290 PF01209 ubiE/COQ5 methyltransferase family AYR67_16300 PF03109 AYR67_16300 AYR67_16305 PF01494 FAD binding domain AYR67_16310 PF01502 Phosphoribosyl-AMP cyclohydrolase AYR67_16310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AYR67_16315 PF13245 Part of AAA domain AYR67_16315 PF13361 UvrD-like helicase C-terminal domain AYR67_16320 PF13476 AAA domain AYR67_16325 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AYR67_16325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYR67_16325 PF04039 AYR67_16325 AYR67_16325 PF13244 AYR67_16325 AYR67_16330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYR67_16335 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AYR67_16340 PF01899 AYR67_16340 AYR67_16345 PF04066 AYR67_16345 AYR67_16350 PF03334 AYR67_16350 AYR67_16355 PF02033 Ribosome-binding factor A AYR67_16360 PF00009 Elongation factor Tu GTP binding domain AYR67_16360 PF04760 Translation initiation factor IF-2, N-terminal region AYR67_16360 PF08364 AYR67_16360 AYR67_16360 PF11987 Translation-initiation factor 2 AYR67_16365 PF08529 NusA N-terminal domain AYR67_16365 PF13184 NusA-like KH domain AYR67_16365 PF14520 Helix-hairpin-helix domain AYR67_16370 PF02576 Uncharacterised BCR, YhbC family COG0779 AYR67_16370 PF17384 AYR67_16370 AYR67_16390 PF03840 Preprotein translocase SecG subunit AYR67_16395 PF00121 Triosephosphate isomerase AYR67_16400 PF00437 Type II/IV secretion system protein AYR67_16400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AYR67_16405 PF00482 Type II secretion system (T2SS), protein F AYR67_16410 PF01478 Type IV leader peptidase family AYR67_16410 PF06750 AYR67_16410 AYR67_16415 PF01121 Dephospho-CoA kinase AYR67_16420 PF00892 EamA-like transporter family AYR67_16425 PF00588 SpoU rRNA Methylase family AYR67_16425 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYR67_16430 PF06865 Protein of unknown function (DUF1255) AYR67_16440 PF02463 RecF/RecN/SMC N terminal domain AYR67_16445 PF02622 Uncharacterized ACR, COG1678 AYR67_16450 PF03652 Uncharacterised protein family (UPF0081) AYR67_16455 PF13437 HlyD family secretion protein AYR67_16455 PF13533 Biotin-lipoyl like AYR67_16460 PF07869 AYR67_16460 AYR67_16465 PF04632 AYR67_16465 AYR67_16470 PF01614 Bacterial transcriptional regulator AYR67_16475 PF13532 2OG-Fe(II) oxygenase superfamily AYR67_16480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR67_16480 PF12833 Helix-turn-helix domain AYR67_16485 PF01066 CDP-alcohol phosphatidyltransferase AYR67_16490 PF13622 Thioesterase-like superfamily AYR67_16495 PF01541 GIY-YIG catalytic domain AYR67_16495 PF02151 UvrB/uvrC motif AYR67_16495 PF08459 UvrC Helix-hairpin-helix N-terminal AYR67_16495 PF14520 Helix-hairpin-helix domain AYR67_16510 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AYR67_16515 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_16515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYR67_16515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYR67_16520 PF00108 Thiolase, N-terminal domain AYR67_16520 PF02803 Thiolase, C-terminal domain AYR67_16535 PF06821 Serine hydrolase AYR67_16540 PF13411 MerR HTH family regulatory protein AYR67_16550 PF01323 DSBA-like thioredoxin domain AYR67_16565 PF00183 Hsp90 protein AYR67_16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_16570 PF07007 Protein of unknown function (DUF1311) AYR67_16575 PF03922 OmpW family AYR67_16580 PF03553 AYR67_16580 AYR67_16580 PF13726 AYR67_16580 AYR67_16585 PF00561 alpha/beta hydrolase fold AYR67_16590 PF14539 Domain of unknown function (DUF4442) AYR67_16595 PF13441 AYR67_16595 AYR67_16605 PF00623 RNA polymerase Rpb1, domain 2 AYR67_16605 PF04983 RNA polymerase Rpb1, domain 3 AYR67_16605 PF04997 RNA polymerase Rpb1, domain 1 AYR67_16605 PF04998 RNA polymerase Rpb1, domain 5 AYR67_16605 PF05000 RNA polymerase Rpb1, domain 4 AYR67_16610 PF00562 RNA polymerase Rpb2, domain 6 AYR67_16610 PF04560 RNA polymerase Rpb2, domain 7 AYR67_16610 PF04561 RNA polymerase Rpb2, domain 2 AYR67_16610 PF04563 RNA polymerase beta subunit AYR67_16610 PF04565 RNA polymerase Rpb2, domain 3 AYR67_16610 PF10385 RNA polymerase beta subunit external 1 domain AYR67_16615 PF00542 Ribosomal protein L7/L12 C-terminal domain AYR67_16615 PF16320 AYR67_16615 AYR67_16620 PF00466 Ribosomal protein L10 AYR67_16625 PF00687 Ribosomal protein L1p/L10e family AYR67_16630 PF00298 Ribosomal protein L11, RNA binding domain AYR67_16630 PF03946 Ribosomal protein L11, N-terminal domain AYR67_16635 PF02357 Transcription termination factor nusG AYR67_16640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AYR67_16650 PF00009 Elongation factor Tu GTP binding domain AYR67_16650 PF03143 Elongation factor Tu C-terminal domain AYR67_16650 PF03144 Elongation factor Tu domain 2 AYR67_16675 PF00425 chorismate binding enzyme AYR67_16675 PF04715 Anthranilate synthase component I, N terminal region AYR67_16680 PF13419 Haloacid dehalogenase-like hydrolase AYR67_16685 PF00498 FHA domain AYR67_16690 PF00263 AYR67_16690 AYR67_16690 PF03958 Bacterial type II/III secretion system short domain AYR67_16695 PF11356 Type IV pilus biogenesis AYR67_16700 PF01203 AYR67_16700 AYR67_16705 PF00816 H-NS histone family AYR67_16710 PF13279 Thioesterase-like superfamily AYR67_16725 PF02602 Uroporphyrinogen-III synthase HemD AYR67_16730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AYR67_16730 PF03900 Porphobilinogen deaminase, C-terminal domain AYR67_16735 PF00072 Response regulator receiver domain AYR67_16735 PF04397 LytTr DNA-binding domain AYR67_16740 PF06580 AYR67_16740 AYR67_16745 PF00206 Lyase AYR67_16745 PF14698 Argininosuccinate lyase C-terminal AYR67_16750 PF04362 Bacterial Fe(2+) trafficking AYR67_16755 PF01895 PhoU domain AYR67_16760 PF02321 Outer membrane efflux protein AYR67_16765 PF00892 EamA-like transporter family AYR67_16770 PF00440 Bacterial regulatory proteins, tetR family AYR67_16780 PF01964 ThiC family AYR67_16780 PF13667 ThiC-associated domain AYR67_16785 PF00293 NUDIX domain AYR67_16790 PF00149 Calcineurin-like phosphoesterase AYR67_16795 PF01258 Prokaryotic dksA/traR C4-type zinc finger AYR67_16800 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR67_16805 PF01098 AYR67_16805 AYR67_16810 PF02875 Mur ligase family, glutamate ligase domain AYR67_16810 PF08245 Mur ligase middle domain AYR67_16820 PF02421 Ferrous iron transport protein B AYR67_16820 PF07664 AYR67_16820 AYR67_16820 PF07670 Nucleoside recognition AYR67_16825 PF04023 FeoA domain AYR67_16830 PF00589 Phage integrase family AYR67_16830 PF02899 Phage integrase, N-terminal SAM-like domain AYR67_16835 PF10411 Disulfide bond isomerase protein N-terminus AYR67_16835 PF13098 Thioredoxin-like domain AYR67_16840 PF00742 Homoserine dehydrogenase AYR67_16840 PF01842 ACT domain AYR67_16840 PF03447 Homoserine dehydrogenase, NAD binding domain AYR67_16845 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_16850 PF00768 D-alanyl-D-alanine carboxypeptidase AYR67_16855 PF00072 Response regulator receiver domain AYR67_16855 PF00196 Bacterial regulatory proteins, luxR family AYR67_16860 PF00512 His Kinase A (phospho-acceptor) domain AYR67_16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR67_16865 PF00072 Response regulator receiver domain AYR67_16865 PF00158 Sigma-54 interaction domain AYR67_16865 PF02954 Bacterial regulatory protein, Fis family AYR67_16870 PF03572 Peptidase family S41 AYR67_16875 PF01676 Metalloenzyme superfamily AYR67_16875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AYR67_16880 PF03739 AYR67_16880 AYR67_16885 PF03739 AYR67_16885 AYR67_16890 PF00883 Cytosol aminopeptidase family, catalytic domain AYR67_16890 PF02789 Cytosol aminopeptidase family, N-terminal domain AYR67_16895 PF04364 DNA polymerase III chi subunit, HolC AYR67_16910 PF00677 Lumazine binding domain AYR67_16915 PF02086 D12 class N6 adenine-specific DNA methyltransferase AYR67_16920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYR67_16920 PF01872 RibD C-terminal domain AYR67_16925 PF03477 ATP cone domain AYR67_16930 PF00909 Ammonium Transporter Family AYR67_16935 PF00543 Nitrogen regulatory protein P-II AYR67_16940 PF04380 AYR67_16940 AYR67_16955 PF01636 Phosphotransferase enzyme family AYR67_16960 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AYR67_16970 PF04986 AYR67_16970 AYR67_16970 PF14319 AYR67_16970 AYR67_16980 PF00440 Bacterial regulatory proteins, tetR family AYR67_16980 PF02909 Tetracyclin repressor, C-terminal all-alpha domain AYR67_16985 PF07690 Major Facilitator Superfamily AYR67_16995 PF01609 Transposase DDE domain AYR67_17000 PF01609 Transposase DDE domain AYR67_17005 PF00905 Penicillin binding protein transpeptidase domain AYR67_17025 PF01609 Transposase DDE domain AYR67_17030 PF01609 Transposase DDE domain AYR67_17035 PF00916 AYR67_17035 AYR67_17035 PF01740 STAS domain AYR67_17040 PF00582 Universal stress protein family AYR67_17060 PF06527 AYR67_17060 AYR67_17065 PF05621 AYR67_17065 AYR67_17070 PF00665 Integrase core domain AYR67_17070 PF09299 Mu transposase, C-terminal AYR67_17075 PF08721 TnsA endonuclease C terminal AYR67_17075 PF08722 TnsA endonuclease N terminal AYR67_17080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR67_17085 PF00809 Pterin binding enzyme AYR67_17090 PF01609 Transposase DDE domain AYR67_17095 PF01609 Transposase DDE domain AYR67_17105 PF00665 Integrase core domain AYR67_17105 PF09299 Mu transposase, C-terminal AYR67_17110 PF08721 TnsA endonuclease C terminal AYR67_17110 PF08722 TnsA endonuclease N terminal AYR67_17130 PF00589 Phage integrase family AYR67_17130 PF02899 Phage integrase, N-terminal SAM-like domain AYR67_17140 PF06414 Zeta toxin AYR67_17160 PF01609 Transposase DDE domain AYR67_17165 PF01609 Transposase DDE domain AYR67_17170 PF00905 Penicillin binding protein transpeptidase domain AYR67_17190 PF01609 Transposase DDE domain AYR67_17195 PF01609 Transposase DDE domain AYR67_17200 PF00916 AYR67_17200 AYR67_17200 PF01740 STAS domain AYR67_17205 PF00582 Universal stress protein family AYR67_17220 PF05621 AYR67_17220 AYR67_17225 PF00665 Integrase core domain AYR67_17225 PF09299 Mu transposase, C-terminal AYR67_17230 PF08721 TnsA endonuclease C terminal AYR67_17230 PF08722 TnsA endonuclease N terminal AYR67_17245 PF00596 Class II Aldolase and Adducin N-terminal domain AYR67_17250 PF00701 Dihydrodipicolinate synthetase family AYR67_17255 PF09694 AYR67_17255 AYR67_17260 PF03573 outer membrane porin, OprD family AYR67_17265 PF00719 Inorganic pyrophosphatase AYR67_17270 PF01124 MAPEG family AYR67_17280 PF00501 AMP-binding enzyme AYR67_17280 PF13193 AMP-binding enzyme C-terminal domain AYR67_17285 PF00521 DNA gyrase/topoisomerase IV, subunit A AYR67_17285 PF03989 DNA gyrase C-terminal domain, beta-propeller AYR67_17290 PF00083 Sugar (and other) transporter AYR67_17295 PF03458 AYR67_17295 AYR67_17300 PF02810 SEC-C motif AYR67_17305 PF00571 CBS domain AYR67_17305 PF03471 Transporter associated domain AYR67_17305 PF03741 AYR67_17305 AYR67_17310 PF03641 Possible lysine decarboxylase AYR67_17315 PF07690 Major Facilitator Superfamily AYR67_17320 PF01183 Glycosyl hydrolases family 25 AYR67_17325 PF00817 impB/mucB/samB family AYR67_17325 PF11798 IMS family HHH motif AYR67_17325 PF11799 impB/mucB/samB family C-terminal domain AYR67_17330 PF01042 Endoribonuclease L-PSP AYR67_17335 PF10881 AYR67_17335 AYR67_17340 PF04055 Radical SAM superfamily AYR67_17340 PF08497 AYR67_17340 AYR67_17340 PF11842 AYR67_17340 AYR67_17345 PF13449 Esterase-like activity of phytase AYR67_17350 PF13411 MerR HTH family regulatory protein AYR67_17355 PF11158 AYR67_17355 AYR67_17360 PF03358 NADPH-dependent FMN reductase AYR67_17365 PF01464 Transglycosylase SLT domain AYR67_17370 PF00291 Pyridoxal-phosphate dependent enzyme AYR67_17375 PF13527 Acetyltransferase (GNAT) domain AYR67_17405 PF00440 Bacterial regulatory proteins, tetR family AYR67_17410 PF09995 AYR67_17410 AYR67_17420 PF00593 TonB dependent receptor AYR67_17420 PF07715 TonB-dependent Receptor Plug Domain AYR67_17425 PF11162 AYR67_17425 AYR67_17430 PF01327 Polypeptide deformylase AYR67_17435 PF01476 LysM domain AYR67_17440 PF02481 DNA recombination-mediator protein A AYR67_17445 PF01300 Telomere recombination AYR67_17450 PF00892 EamA-like transporter family AYR67_17455 PF00440 Bacterial regulatory proteins, tetR family AYR67_17460 PF07690 Major Facilitator Superfamily AYR67_17465 PF12833 Helix-turn-helix domain AYR67_17470 PF00255 Glutathione peroxidase AYR67_17480 PF11008 AYR67_17480 AYR67_17485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AYR67_17490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR67_17490 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYR67_17495 PF00231 ATP synthase AYR67_17500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR67_17500 PF00306 ATP synthase alpha/beta chain, C terminal domain AYR67_17500 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYR67_17505 PF00213 ATP synthase delta (OSCP) subunit AYR67_17510 PF00430 ATP synthase B/B' CF(0) AYR67_17515 PF00137 ATP synthase subunit C AYR67_17520 PF00119 ATP synthase A chain AYR67_17525 PF03899 AYR67_17525 AYR67_17530 PF01297 Periplasmic solute binding protein family AYR67_17535 PF01475 Ferric uptake regulator family AYR67_17540 PF00005 ABC transporter AYR67_17545 PF00950 AYR67_17545 AYR67_17550 PF01810 AYR67_17550 AYR67_17555 PF04261 Dyp-type peroxidase family AYR67_17560 PF00390 Malic enzyme, N-terminal domain AYR67_17560 PF03949 Malic enzyme, NAD binding domain AYR67_17565 PF13737 AYR67_17565 AYR67_17570 PF00750 tRNA synthetases class I (R) AYR67_17570 PF03485 Arginyl tRNA synthetase N terminal domain AYR67_17570 PF05746 DALR anticodon binding domain AYR67_17575 PF05036 Sporulation related domain AYR67_17580 PF02798 Glutathione S-transferase, N-terminal domain AYR67_17580 PF14497 Glutathione S-transferase, C-terminal domain AYR67_17585 PF02566 OsmC-like protein AYR67_17590 PF02678 Pirin AYR67_17590 PF05726 Pirin C-terminal cupin domain AYR67_17595 PF12977 Domain of Unknown Function with PDB structure (DUF3861) AYR67_17600 PF03551 Transcriptional regulator PadR-like family AYR67_17605 PF01909 Nucleotidyltransferase domain AYR67_17605 PF13427 AYR67_17605 AYR67_17610 PF00117 Glutamine amidotransferase class-I AYR67_17610 PF00958 GMP synthase C terminal domain AYR67_17610 PF02540 NAD synthase AYR67_17615 PF04286 AYR67_17615 AYR67_17620 PF07681 AYR67_17620 AYR67_17625 PF09335 AYR67_17625 AYR67_17630 PF01810 AYR67_17630 AYR67_17640 PF13614 AAA domain AYR67_17645 PF04247 AYR67_17645 AYR67_17650 PF01722 BolA-like protein AYR67_17665 PF13737 AYR67_17665 AYR67_17670 PF16245 AYR67_17670 AYR67_17675 PF00765 Autoinducer synthetase AYR67_17680 PF07690 Major Facilitator Superfamily AYR67_17685 PF16113 AYR67_17685 AYR67_17690 PF00378 Enoyl-CoA hydratase/isomerase family AYR67_17695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYR67_17695 PF02770 Acyl-CoA dehydrogenase, middle domain AYR67_17695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYR67_17700 PF00501 AMP-binding enzyme AYR67_17700 PF13193 AMP-binding enzyme C-terminal domain AYR67_17705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR67_17705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR67_17710 PF00171 Aldehyde dehydrogenase family AYR67_17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_17715 PF03466 LysR substrate binding domain AYR67_17720 PF00324 Amino acid permease AYR67_17725 PF00324 Amino acid permease AYR67_17730 PF01042 Endoribonuclease L-PSP AYR67_17735 PF00842 Alanine racemase, C-terminal domain AYR67_17735 PF01168 Alanine racemase, N-terminal domain AYR67_17740 PF01266 FAD dependent oxidoreductase AYR67_17745 PF01037 AsnC family AYR67_17745 PF13412 Winged helix-turn-helix DNA-binding AYR67_17750 PF07786 AYR67_17750 AYR67_17755 PF00593 TonB dependent receptor AYR67_17755 PF07715 TonB-dependent Receptor Plug Domain AYR67_17760 PF12680 SnoaL-like domain AYR67_17765 PF06877 Regulator of ribonuclease activity B AYR67_17770 PF00849 RNA pseudouridylate synthase AYR67_17785 PF13737 AYR67_17785 AYR67_17795 PF01541 GIY-YIG catalytic domain AYR67_17800 PF13548 AYR67_17800 AYR67_17810 PF00330 Aconitase family (aconitate hydratase) AYR67_17810 PF00694 Aconitase C-terminal domain AYR67_17815 PF00285 Citrate synthase AYR67_17820 PF13714 Phosphoenolpyruvate phosphomutase AYR67_17825 PF00392 Bacterial regulatory proteins, gntR family AYR67_17825 PF07729 FCD domain AYR67_17830 PF00155 Aminotransferase class I and II AYR67_17835 PF01565 FAD binding domain AYR67_17835 PF09330 D-lactate dehydrogenase, membrane binding AYR67_17840 PF01070 FMN-dependent dehydrogenase AYR67_17845 PF00392 Bacterial regulatory proteins, gntR family AYR67_17845 PF07729 FCD domain AYR67_17850 PF02652 AYR67_17850 AYR67_17855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR67_17855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR67_17855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR67_17855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR67_17860 PF16363 AYR67_17860 AYR67_17865 PF00342 Phosphoglucose isomerase AYR67_17870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYR67_17870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYR67_17875 PF00483 Nucleotidyl transferase AYR67_17880 PF02397 AYR67_17880 AYR67_17885 PF00953 Glycosyl transferase family 4 AYR67_17895 PF00534 Glycosyl transferases group 1 AYR67_17900 PF02350 UDP-N-acetylglucosamine 2-epimerase AYR67_17905 PF01370 NAD dependent epimerase/dehydratase family AYR67_17910 PF02719 Polysaccharide biosynthesis protein AYR67_17910 PF08485 Polysaccharide biosynthesis protein C-terminal AYR67_17915 PF14667 Polysaccharide biosynthesis C-terminal domain AYR67_17930 PF13561 Enoyl-(Acyl carrier protein) reductase AYR67_17935 PF02348 Cytidylyltransferase AYR67_17940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYR67_17940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AYR67_17945 PF00483 Nucleotidyl transferase AYR67_17945 PF00571 CBS domain AYR67_17955 PF03102 NeuB family AYR67_17955 PF08666 SAF domain AYR67_17960 PF02350 UDP-N-acetylglucosamine 2-epimerase AYR67_17965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AYR67_17970 PF02719 Polysaccharide biosynthesis protein AYR67_17975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYR67_17975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYR67_17975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYR67_17980 PF02563 Polysaccharide biosynthesis/export protein AYR67_17985 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYR67_17990 PF02706 Chain length determinant protein AYR67_17990 PF13614 AAA domain AYR67_17990 PF13807 AYR67_17990 AYR67_17995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR67_17995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AYR67_18000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR67_18000 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AYR67_18005 PF03023 AYR67_18005 AYR67_18010 PF01510 N-acetylmuramoyl-L-alanine amidase AYR67_18015 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AYR67_18015 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AYR67_18030 PF01138 3' exoribonuclease family, domain 1 AYR67_18030 PF03725 3' exoribonuclease family, domain 2 AYR67_18035 PF00487 AYR67_18035 AYR67_18040 PF00175 Oxidoreductase NAD-binding domain AYR67_18040 PF00970 Oxidoreductase FAD-binding domain AYR67_18045 PF00440 Bacterial regulatory proteins, tetR family AYR67_18050 PF00440 Bacterial regulatory proteins, tetR family AYR67_18055 PF01323 DSBA-like thioredoxin domain AYR67_18060 PF13489 Methyltransferase domain AYR67_18065 PF13419 Haloacid dehalogenase-like hydrolase AYR67_18070 PF00106 short chain dehydrogenase AYR67_18075 PF11776 Domain of unknown function (DUF3315) AYR67_18080 PF11776 Domain of unknown function (DUF3315) AYR67_18085 PF00583 Acetyltransferase (GNAT) family AYR67_18085 PF00696 Amino acid kinase family AYR67_18090 PF09084 NMT1/THI5 like AYR67_18095 PF13379 NMT1-like family AYR67_18100 PF00296 Luciferase-like monooxygenase AYR67_18105 PF00528 Binding-protein-dependent transport system inner membrane component AYR67_18110 PF00005 ABC transporter AYR67_18115 PF00440 Bacterial regulatory proteins, tetR family AYR67_18115 PF08362 YcdC-like protein, C-terminal region AYR67_18120 PF01048 Phosphorylase superfamily AYR67_18125 PF03595 Voltage-dependent anion channel AYR67_18130 PF01687 Riboflavin kinase AYR67_18130 PF06574 FAD synthetase AYR67_18135 PF00133 tRNA synthetases class I (I, L, M and V) AYR67_18135 PF06827 Zinc finger found in FPG and IleRS AYR67_18135 PF08264 Anticodon-binding domain of tRNA AYR67_18140 PF01252 AYR67_18140 AYR67_18145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR67_18150 PF03358 NADPH-dependent FMN reductase AYR67_18155 PF12796 Ankyrin repeats (3 copies) AYR67_18185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYR67_18190 PF07859 alpha/beta hydrolase fold AYR67_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR67_18215 PF03466 LysR substrate binding domain AYR67_18220 PF01025 GrpE AYR67_18225 PF00012 Hsp70 protein AYR67_18230 PF00413 Matrixin AYR67_18245 PF01471 Putative peptidoglycan binding domain AYR67_18245 PF13406 Transglycosylase SLT domain AYR67_18250 PF02222 ATP-grasp domain AYR67_18255 PF00731 AIR carboxylase AYR67_18265 PF04342 AYR67_18265 AYR67_18270 PF01225 Mur ligase family, catalytic domain AYR67_18270 PF02875 Mur ligase family, glutamate ligase domain AYR67_18270 PF08245 Mur ligase middle domain AYR67_18275 PF06772 AYR67_18275 AYR67_18280 PF00872 AYR67_18280 AYR67_18285 PF01569 PAP2 superfamily AYR67_18290 PF03741 AYR67_18290 AYR67_18300 PF03738 Glutathionylspermidine synthase preATP-grasp AYR67_18305 PF00355 Rieske [2Fe-2S] domain AYR67_18310 PF01979 Amidohydrolase family AYR67_18320 PF00156 Phosphoribosyl transferase domain AYR67_18325 PF04226 AYR67_18325 AYR67_18330 PF10411 Disulfide bond isomerase protein N-terminus AYR67_18330 PF13098 Thioredoxin-like domain AYR67_18335 PF01545 Cation efflux family AYR67_18340 PF02583 Metal-sensitive transcriptional repressor AYR67_18345 PF01926 50S ribosome-binding GTPase AYR67_18345 PF10396 GTP-binding protein TrmE N-terminus AYR67_18345 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AYR67_18350 PF02096 60Kd inner membrane protein AYR67_18350 PF14849 YidC periplasmic domain AYR67_18355 PF01809 AYR67_18355 AYR67_18360 PF00825 Ribonuclease P AYR67_18365 PF00468 Ribosomal protein L34