AYR67_00005 SM00382 ATPases associated with a variety of cellular activities AYR67_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AYR67_00010 SM00480 DNA polymerase III beta subunit AYR67_00020 SM00387 Histidine kinase-like ATPases AYR67_00020 SM00433 TopoisomeraseII AYR67_00035 SM00382 ATPases associated with a variety of cellular activities AYR67_00180 SM00271 DnaJ molecular chaperone homology domain AYR67_00220 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_00225 SM00829 Enoylreductase AYR67_00245 SM00478 endonuclease III AYR67_00245 SM00525 AYR67_00245 AYR67_00275 SM00382 ATPases associated with a variety of cellular activities AYR67_00300 SM01130 AYR67_00300 AYR67_00330 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_00360 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYR67_00370 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_00370 SM00866 AYR67_00370 AYR67_00485 SM00450 Rhodanese Homology Domain AYR67_00500 SM00387 Histidine kinase-like ATPases AYR67_00500 SM00388 His Kinase A (phosphoacceptor) domain AYR67_00505 SM00448 cheY-homologous receiver domain AYR67_00505 SM00862 Transcriptional regulatory protein, C terminal AYR67_00570 SM00387 Histidine kinase-like ATPases AYR67_00570 SM00433 TopoisomeraseII AYR67_00640 SM00267 diguanylate cyclase AYR67_00705 SM00842 Cell division protein FtsA AYR67_00710 SM00864 Tubulin/FtsZ family, GTPase domain AYR67_00710 SM00865 Tubulin/FtsZ family, C-terminal domain AYR67_00755 SM00849 Metallo-beta-lactamase superfamily AYR67_00765 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR67_00765 SM01240 AYR67_00765 AYR67_00790 SM00937 AYR67_00790 AYR67_00795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR67_00835 SM00344 helix_turn_helix ASNC type AYR67_00850 SM00421 helix_turn_helix, Lux Regulon AYR67_00850 SM00448 cheY-homologous receiver domain AYR67_00860 SM00387 Histidine kinase-like ATPases AYR67_00860 SM00388 His Kinase A (phosphoacceptor) domain AYR67_00860 SM00448 cheY-homologous receiver domain AYR67_00890 SM00267 diguanylate cyclase AYR67_00905 SM00829 Enoylreductase AYR67_00950 SM00530 Helix-turn-helix XRE-family like proteins AYR67_00960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_01040 SM00342 helix_turn_helix, arabinose operon control protein AYR67_01050 SM00671 Sel1-like repeats. AYR67_01100 SM00477 DNA/RNA non-specific endonuclease AYR67_01100 SM00892 DNA/RNA non-specific endonuclease AYR67_01120 SM00342 helix_turn_helix, arabinose operon control protein AYR67_01140 SM00357 Cold shock protein domain AYR67_01160 SM00530 Helix-turn-helix XRE-family like proteins AYR67_01170 SM00474 3'-5' exonuclease AYR67_01215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR67_01215 SM00387 Histidine kinase-like ATPases AYR67_01215 SM00388 His Kinase A (phosphoacceptor) domain AYR67_01220 SM00448 cheY-homologous receiver domain AYR67_01220 SM00862 Transcriptional regulatory protein, C terminal AYR67_01225 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_01225 SM00732 Likely ribonuclease with RNase H fold. AYR67_01230 SM00947 Carbonic anhydrase AYR67_01245 SM00382 ATPases associated with a variety of cellular activities AYR67_01250 SM00671 Sel1-like repeats. AYR67_01400 SM00842 Cell division protein FtsA AYR67_01420 SM00965 Secretin and TonB N terminus short domain AYR67_01500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR67_01500 SM00954 Region found in RelA / SpoT proteins AYR67_01505 SM01409 AYR67_01505 AYR67_01510 SM00072 Guanylate kinase homologues. AYR67_01695 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR67_01795 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR67_01835 SM00861 Transketolase, pyrimidine binding domain AYR67_01845 SM00487 DEAD-like helicases superfamily AYR67_01845 SM00490 helicase superfamily c-terminal domain AYR67_01855 SM00382 ATPases associated with a variety of cellular activities AYR67_01900 SM00487 DEAD-like helicases superfamily AYR67_01900 SM00490 helicase superfamily c-terminal domain AYR67_01915 SM00563 Phosphate acyltransferases AYR67_01965 SM01403 AYR67_01965 AYR67_01985 SM01382 AYR67_01985 AYR67_01985 SM01383 AYR67_01985 AYR67_02000 SM00322 K homology RNA-binding domain AYR67_02020 SM01374 AYR67_02020 AYR67_02025 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYR67_02090 SM00363 S4 RNA-binding domain AYR67_02090 SM01390 AYR67_02090 AYR67_02095 SM00662 RNA polymerases D AYR67_02155 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_02155 SM00955 AYR67_02155 AYR67_02205 SM00342 helix_turn_helix, arabinose operon control protein AYR67_02255 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_02285 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AYR67_02375 SM00878 Biotin carboxylase C-terminal domain AYR67_02410 SM00650 Ribosomal RNA adenine dimethylases AYR67_02440 SM00563 Phosphate acyltransferases AYR67_02445 SM00155 Phospholipase D. Active site motifs. AYR67_02460 SM00267 diguanylate cyclase AYR67_02535 SM00450 Rhodanese Homology Domain AYR67_02560 SM00481 DNA polymerase alpha chain like domain AYR67_02590 SM01323 AYR67_02590 AYR67_02620 SM00387 Histidine kinase-like ATPases AYR67_02620 SM00388 His Kinase A (phosphoacceptor) domain AYR67_02745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR67_02745 SM00387 Histidine kinase-like ATPases AYR67_02745 SM00388 His Kinase A (phosphoacceptor) domain AYR67_02750 SM00448 cheY-homologous receiver domain AYR67_02750 SM00862 Transcriptional regulatory protein, C terminal AYR67_02810 SM00342 helix_turn_helix, arabinose operon control protein AYR67_02840 SM00849 Metallo-beta-lactamase superfamily AYR67_02850 SM00957 SecA DEAD-like domain AYR67_02850 SM00958 SecA preprotein cross-linking domain AYR67_02900 SM00342 helix_turn_helix, arabinose operon control protein AYR67_02915 SM00564 beta-propeller repeat AYR67_02980 SM00838 Elongation factor G C-terminus AYR67_03000 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AYR67_03000 SM01232 AYR67_03000 AYR67_03040 SM00671 Sel1-like repeats. AYR67_03095 SM00448 cheY-homologous receiver domain AYR67_03100 SM00448 cheY-homologous receiver domain AYR67_03105 SM00260 Two component signalling adaptor domain AYR67_03110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AYR67_03115 SM00073 Histidine Phosphotransfer domain AYR67_03115 SM00260 Two component signalling adaptor domain AYR67_03115 SM00387 Histidine kinase-like ATPases AYR67_03115 SM00448 cheY-homologous receiver domain AYR67_03115 SM01231 AYR67_03115 AYR67_03270 SM00845 GatB domain AYR67_03305 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_03340 SM00342 helix_turn_helix, arabinose operon control protein AYR67_03360 SM00342 helix_turn_helix, arabinose operon control protein AYR67_03365 SM00829 Enoylreductase AYR67_03400 SM00244 prohibitin homologues AYR67_03415 SM00563 Phosphate acyltransferases AYR67_03435 SM00448 cheY-homologous receiver domain AYR67_03435 SM00862 Transcriptional regulatory protein, C terminal AYR67_03440 SM00387 Histidine kinase-like ATPases AYR67_03440 SM00388 His Kinase A (phosphoacceptor) domain AYR67_03485 SM00822 AYR67_03485 AYR67_03520 SM00014 Acid phosphatase homologues AYR67_03630 SM00450 Rhodanese Homology Domain AYR67_03665 SM00861 Transketolase, pyrimidine binding domain AYR67_03685 SM00881 CoA binding domain AYR67_03720 SM00854 Bacterial capsule synthesis protein PGA_cap AYR67_03750 SM00851 MGS-like domain AYR67_03750 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR67_03755 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AYR67_03770 SM01103 AYR67_03770 AYR67_03780 SM00382 ATPases associated with a variety of cellular activities AYR67_03855 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYR67_03870 SM00883 Chaperonin 10 Kd subunit AYR67_03885 SM00849 Metallo-beta-lactamase superfamily AYR67_04015 SM00978 AYR67_04015 AYR67_04020 SM00382 ATPases associated with a variety of cellular activities AYR67_04055 SM00893 Electron transfer flavoprotein domain AYR67_04060 SM00893 Electron transfer flavoprotein domain AYR67_04065 SM00434 DNA Topoisomerase IV AYR67_04135 SM00382 ATPases associated with a variety of cellular activities AYR67_04140 SM00849 Metallo-beta-lactamase superfamily AYR67_04255 SM00382 ATPases associated with a variety of cellular activities AYR67_04260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYR67_04265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR67_04270 SM01211 AYR67_04270 AYR67_04345 SM00382 ATPases associated with a variety of cellular activities AYR67_04395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR67_04405 SM00838 Elongation factor G C-terminus AYR67_04420 SM00358 Double-stranded RNA binding motif AYR67_04420 SM00535 Ribonuclease III family AYR67_04485 SM00267 diguanylate cyclase AYR67_04495 SM00487 DEAD-like helicases superfamily AYR67_04495 SM00490 helicase superfamily c-terminal domain AYR67_04510 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR67_04530 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AYR67_04630 SM01329 AYR67_04630 AYR67_04680 SM00880 AYR67_04680 AYR67_04680 SM01118 AYR67_04680 AYR67_04710 SM00487 DEAD-like helicases superfamily AYR67_04710 SM00490 helicase superfamily c-terminal domain AYR67_04765 SM00344 helix_turn_helix ASNC type AYR67_04795 SM00382 ATPases associated with a variety of cellular activities AYR67_04845 SM00936 Penicillin-binding protein 5, C-terminal domain AYR67_04865 SM00257 Lysin motif AYR67_04900 SM00052 Putative diguanylate phosphodiesterase AYR67_04915 SM00841 Elongation factor P, C-terminal AYR67_04915 SM01185 AYR67_04915 AYR67_05050 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AYR67_05055 SM00829 Enoylreductase AYR67_05115 SM00382 ATPases associated with a variety of cellular activities AYR67_05160 SM00382 ATPases associated with a variety of cellular activities AYR67_05165 SM00382 ATPases associated with a variety of cellular activities AYR67_05230 SM01092 CO dehydrogenase flavoprotein C-terminal domain AYR67_05235 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AYR67_05245 SM00463 Small MutS-related domain AYR67_05285 SM01230 AYR67_05285 AYR67_05340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR67_05350 SM00919 Malic enzyme, NAD binding domain AYR67_05350 SM01274 AYR67_05350 AYR67_05355 SM00052 Putative diguanylate phosphodiesterase AYR67_05355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AYR67_05355 SM00091 PAS domain AYR67_05355 SM00267 diguanylate cyclase AYR67_05370 SM00996 S-adenosyl-L-homocysteine hydrolase AYR67_05370 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AYR67_05390 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_05440 SM00342 helix_turn_helix, arabinose operon control protein AYR67_05490 SM00382 ATPases associated with a variety of cellular activities AYR67_05505 SM00479 AYR67_05505 AYR67_05545 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_05560 SM00382 ATPases associated with a variety of cellular activities AYR67_05580 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_05605 SM00382 ATPases associated with a variety of cellular activities AYR67_05615 SM00448 cheY-homologous receiver domain AYR67_05615 SM00862 Transcriptional regulatory protein, C terminal AYR67_05620 SM00387 Histidine kinase-like ATPases AYR67_05620 SM00388 His Kinase A (phosphoacceptor) domain AYR67_05675 SM00830 Chorismate mutase type II AYR67_05740 SM00357 Cold shock protein domain AYR67_05745 SM00487 DEAD-like helicases superfamily AYR67_05745 SM00490 helicase superfamily c-terminal domain AYR67_05765 SM00855 Phosphoglycerate mutase family AYR67_05845 SM00220 Serine/Threonine protein kinases, catalytic domain AYR67_05920 SM01034 Sensors of blue-light using FAD AYR67_05935 SM00342 helix_turn_helix, arabinose operon control protein AYR67_05955 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_05955 SM00895 AYR67_05955 AYR67_05970 SM00972 Spore Coat Protein U domain AYR67_05995 SM00972 Spore Coat Protein U domain AYR67_06085 SM00849 Metallo-beta-lactamase superfamily AYR67_06095 SM00382 ATPases associated with a variety of cellular activities AYR67_06095 SM00930 AYR67_06095 AYR67_06105 SM01209 AYR67_06105 AYR67_06105 SM01210 AYR67_06105 AYR67_06110 SM00798 AICARFT/IMPCHase bienzyme AYR67_06110 SM00851 MGS-like domain AYR67_06135 SM01228 AYR67_06135 AYR67_06155 SM00460 Transglutaminase/protease-like homologues AYR67_06165 SM01005 Alanine racemase, C-terminal domain AYR67_06280 SM00937 AYR67_06280 AYR67_06295 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_06300 SM00342 helix_turn_helix, arabinose operon control protein AYR67_06305 SM00822 AYR67_06305 AYR67_06320 SM00903 Flavin reductase like domain AYR67_06335 SM00905 Dihydroneopterin aldolase AYR67_06360 SM00387 Histidine kinase-like ATPases AYR67_06360 SM00388 His Kinase A (phosphoacceptor) domain AYR67_06365 SM00448 cheY-homologous receiver domain AYR67_06365 SM00862 Transcriptional regulatory protein, C terminal AYR67_06370 SM01230 AYR67_06370 AYR67_06450 SM00363 S4 RNA-binding domain AYR67_06475 SM00853 MutL C terminal dimerisation domain AYR67_06475 SM01340 AYR67_06475 AYR67_06545 SM00862 Transcriptional regulatory protein, C terminal AYR67_06560 SM00382 ATPases associated with a variety of cellular activities AYR67_06570 SM00342 helix_turn_helix, arabinose operon control protein AYR67_06570 SM00871 Bacterial transcription activator, effector binding domain AYR67_06625 SM00830 Chorismate mutase type II AYR67_06630 SM00344 helix_turn_helix ASNC type AYR67_06710 SM00382 ATPases associated with a variety of cellular activities AYR67_06735 SM00831 Cation transporter/ATPase, N-terminus AYR67_06750 SM00344 helix_turn_helix ASNC type AYR67_06780 SM00822 AYR67_06780 AYR67_06805 SM00382 ATPases associated with a variety of cellular activities AYR67_06830 SM00226 Low molecular weight phosphatase family AYR67_06865 SM01236 AYR67_06865 AYR67_06935 SM00530 Helix-turn-helix XRE-family like proteins AYR67_07010 SM00530 Helix-turn-helix XRE-family like proteins AYR67_07335 SM01040 BRO family, N-terminal domain AYR67_07380 SM00878 Biotin carboxylase C-terminal domain AYR67_07405 SM00448 cheY-homologous receiver domain AYR67_07405 SM01012 AYR67_07405 AYR67_07425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYR67_07435 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYR67_07440 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_07455 SM00852 Probable molybdopterin binding domain AYR67_07460 SM00852 Probable molybdopterin binding domain AYR67_07470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_07625 SM00382 ATPases associated with a variety of cellular activities AYR67_07685 SM00382 ATPases associated with a variety of cellular activities AYR67_07685 SM00448 cheY-homologous receiver domain AYR67_07690 SM00091 PAS domain AYR67_07690 SM00387 Histidine kinase-like ATPases AYR67_07690 SM00388 His Kinase A (phosphoacceptor) domain AYR67_07695 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_07725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR67_07735 SM00935 Outer membrane protein (OmpH-like) AYR67_07770 SM00382 ATPases associated with a variety of cellular activities AYR67_07775 SM00363 S4 RNA-binding domain AYR67_07805 SM00344 helix_turn_helix ASNC type AYR67_07850 SM00052 Putative diguanylate phosphodiesterase AYR67_07850 SM00091 PAS domain AYR67_07850 SM00267 diguanylate cyclase AYR67_07860 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR67_07935 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR67_07960 SM00382 ATPases associated with a variety of cellular activities AYR67_07960 SM00962 SRP54-type protein, GTPase domain AYR67_07960 SM00963 SRP54-type protein, helical bundle domain AYR67_08025 SM01264 AYR67_08025 AYR67_08065 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYR67_08080 SM00382 ATPases associated with a variety of cellular activities AYR67_08080 SM01086 C-terminal, D2-small domain, of ClpB protein AYR67_08145 SM01192 AYR67_08145 AYR67_08145 SM01193 AYR67_08145 AYR67_08165 SM00882 Coenzyme A transferase AYR67_08170 SM00882 Coenzyme A transferase AYR67_08180 SM00998 Adenylosuccinate lyase C-terminus AYR67_08215 SM00710 Parallel beta-helix repeats AYR67_08225 SM00564 beta-propeller repeat AYR67_08245 SM00849 Metallo-beta-lactamase superfamily AYR67_08250 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_08270 SM00855 Phosphoglycerate mutase family AYR67_08290 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR67_08335 SM00903 Flavin reductase like domain AYR67_08340 SM00342 helix_turn_helix, arabinose operon control protein AYR67_08375 SM00882 Coenzyme A transferase AYR67_08380 SM00882 Coenzyme A transferase AYR67_08395 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AYR67_08410 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_08410 SM00895 AYR67_08410 AYR67_08445 SM00855 Phosphoglycerate mutase family AYR67_08460 SM00091 PAS domain AYR67_08460 SM00382 ATPases associated with a variety of cellular activities AYR67_08480 SM00829 Enoylreductase AYR67_08500 SM01060 AYR67_08500 AYR67_08525 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR67_08545 SM00422 helix_turn_helix, mercury resistance AYR67_08620 SM00912 haemagglutination activity domain AYR67_08650 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_08650 SM00866 AYR67_08650 AYR67_08685 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_08770 SM00342 helix_turn_helix, arabinose operon control protein AYR67_08785 SM00829 Enoylreductase AYR67_08800 SM00382 ATPases associated with a variety of cellular activities AYR67_08810 SM00342 helix_turn_helix, arabinose operon control protein AYR67_08820 SM01400 AYR67_08820 AYR67_08895 SM00421 helix_turn_helix, Lux Regulon AYR67_08950 SM00530 Helix-turn-helix XRE-family like proteins AYR67_08985 SM00822 AYR67_08985 AYR67_08990 SM00822 AYR67_08990 AYR67_09000 SM00342 helix_turn_helix, arabinose operon control protein AYR67_09010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR67_09010 SM00387 Histidine kinase-like ATPases AYR67_09010 SM00388 His Kinase A (phosphoacceptor) domain AYR67_09015 SM00448 cheY-homologous receiver domain AYR67_09015 SM00862 Transcriptional regulatory protein, C terminal AYR67_09115 SM00829 Enoylreductase AYR67_09140 SM00155 Phospholipase D. Active site motifs. AYR67_09165 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_09210 SM00382 ATPases associated with a variety of cellular activities AYR67_09245 SM00342 helix_turn_helix, arabinose operon control protein AYR67_09255 SM00903 Flavin reductase like domain AYR67_09280 SM00342 helix_turn_helix, arabinose operon control protein AYR67_09315 SM00882 Coenzyme A transferase AYR67_09320 SM00882 Coenzyme A transferase AYR67_09375 SM00567 E-Z type HEAT repeats AYR67_09380 SM00382 ATPases associated with a variety of cellular activities AYR67_09405 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_09405 SM00866 AYR67_09405 AYR67_09425 SM00342 helix_turn_helix, arabinose operon control protein AYR67_09450 SM00849 Metallo-beta-lactamase superfamily AYR67_09455 SM00382 ATPases associated with a variety of cellular activities AYR67_09465 SM00829 Enoylreductase AYR67_09485 SM00861 Transketolase, pyrimidine binding domain AYR67_09495 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_09510 SM00267 diguanylate cyclase AYR67_09535 SM00382 ATPases associated with a variety of cellular activities AYR67_09565 SM00341 Helicase and RNase D C-terminal AYR67_09565 SM00474 3'-5' exonuclease AYR67_09570 SM00493 AYR67_09570 AYR67_09620 SM01324 AYR67_09620 AYR67_09670 SM00382 ATPases associated with a variety of cellular activities AYR67_09730 SM00855 Phosphoglycerate mutase family AYR67_09755 SM01006 Siderophore biosynthesis protein domain AYR67_09845 SM00342 helix_turn_helix, arabinose operon control protein AYR67_09855 SM00411 bacterial (prokaryotic) histone like domain AYR67_09890 SM00271 DnaJ molecular chaperone homology domain AYR67_09905 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AYR67_09915 SM00487 DEAD-like helicases superfamily AYR67_09915 SM00490 helicase superfamily c-terminal domain AYR67_09915 SM00982 AYR67_09915 AYR67_09915 SM01058 CarD-like/TRCF domain AYR67_09970 SM00382 ATPases associated with a variety of cellular activities AYR67_10040 SM00342 helix_turn_helix, arabinose operon control protein AYR67_10055 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYR67_10065 SM00411 bacterial (prokaryotic) histone like domain AYR67_10070 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_10095 SM00986 Uracil DNA glycosylase superfamily AYR67_10095 SM00987 UreE urease accessory protein, C-terminal domain AYR67_10155 SM00382 ATPases associated with a variety of cellular activities AYR67_10170 SM00470 ParB-like nuclease domain AYR67_10230 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AYR67_10240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR67_10260 SM00382 ATPases associated with a variety of cellular activities AYR67_10270 SM00342 helix_turn_helix, arabinose operon control protein AYR67_10290 SM00344 helix_turn_helix ASNC type AYR67_10325 SM00867 YceI-like domain AYR67_10335 SM00861 Transketolase, pyrimidine binding domain AYR67_10370 SM00530 Helix-turn-helix XRE-family like proteins AYR67_10390 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_10390 SM00876 Biotin and Thiamin Synthesis associated domain AYR67_10470 SM01236 AYR67_10470 AYR67_10480 SM00563 Phosphate acyltransferases AYR67_10490 SM00344 helix_turn_helix ASNC type AYR67_10500 SM00382 ATPases associated with a variety of cellular activities AYR67_10515 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_10550 SM00382 ATPases associated with a variety of cellular activities AYR67_10550 SM00930 AYR67_10550 AYR67_10570 SM00100 Cyclic nucleotide-monophosphate binding domain AYR67_10570 SM00419 helix_turn_helix, cAMP Regulatory protein AYR67_10605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR67_10620 SM00342 helix_turn_helix, arabinose operon control protein AYR67_10645 SM00870 AYR67_10645 AYR67_10650 SM00481 DNA polymerase alpha chain like domain AYR67_10700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR67_10730 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_10730 SM00895 AYR67_10730 AYR67_10755 SM00382 ATPases associated with a variety of cellular activities AYR67_10760 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_10805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_10825 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AYR67_10875 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_10910 SM00822 AYR67_10910 AYR67_10915 SM00450 Rhodanese Homology Domain AYR67_10945 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_10950 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_10955 SM00382 ATPases associated with a variety of cellular activities AYR67_10975 SM00421 helix_turn_helix, Lux Regulon AYR67_10975 SM00448 cheY-homologous receiver domain AYR67_10980 SM00387 Histidine kinase-like ATPases AYR67_10980 SM00388 His Kinase A (phosphoacceptor) domain AYR67_10980 SM00448 cheY-homologous receiver domain AYR67_10990 SM00344 helix_turn_helix ASNC type AYR67_11010 SM00384 DNA binding domain with preference for A/T rich regions AYR67_11025 SM01060 AYR67_11025 AYR67_11030 SM01236 AYR67_11030 AYR67_11115 SM00878 Biotin carboxylase C-terminal domain AYR67_11160 SM00882 Coenzyme A transferase AYR67_11165 SM00882 Coenzyme A transferase AYR67_11200 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_11220 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_11260 SM00382 ATPases associated with a variety of cellular activities AYR67_11270 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_11270 SM00866 AYR67_11270 AYR67_11280 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_11325 SM00903 Flavin reductase like domain AYR67_11340 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_11340 SM00895 AYR67_11340 AYR67_11355 SM01060 AYR67_11355 AYR67_11480 SM00342 helix_turn_helix, arabinose operon control protein AYR67_11505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_11505 SM00895 AYR67_11505 AYR67_11515 SM01130 AYR67_11515 AYR67_11525 SM00422 helix_turn_helix, mercury resistance AYR67_11570 SM00248 ankyrin repeats AYR67_11605 SM00382 ATPases associated with a variety of cellular activities AYR67_11605 SM01086 C-terminal, D2-small domain, of ClpB protein AYR67_11685 SM00382 ATPases associated with a variety of cellular activities AYR67_11725 SM00796 Allophanate hydrolase subunit 1 AYR67_11725 SM00797 Allophanate hydrolase subunit 2 AYR67_11725 SM00878 Biotin carboxylase C-terminal domain AYR67_11740 SM00829 Enoylreductase AYR67_11770 SM00671 Sel1-like repeats. AYR67_11780 SM00878 Biotin carboxylase C-terminal domain AYR67_11785 SM00796 Allophanate hydrolase subunit 1 AYR67_11785 SM00797 Allophanate hydrolase subunit 2 AYR67_11860 SM00422 helix_turn_helix, mercury resistance AYR67_11885 SM00052 Putative diguanylate phosphodiesterase AYR67_11895 SM00344 helix_turn_helix ASNC type AYR67_11900 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYR67_11900 SM00534 ATPase domain of DNA mismatch repair MUTS family AYR67_11945 SM00382 ATPases associated with a variety of cellular activities AYR67_11955 SM00382 ATPases associated with a variety of cellular activities AYR67_11975 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR67_11980 SM00840 AYR67_11980 AYR67_12045 SM00357 Cold shock protein domain AYR67_12070 SM00530 Helix-turn-helix XRE-family like proteins AYR67_12120 SM00422 helix_turn_helix, mercury resistance AYR67_12180 SM00382 ATPases associated with a variety of cellular activities AYR67_12180 SM00487 DEAD-like helicases superfamily AYR67_12180 SM00490 helicase superfamily c-terminal domain AYR67_12180 SM00847 Helicase associated domain (HA2) Add an annotation AYR67_12260 SM00981 AYR67_12260 AYR67_12275 SM00382 ATPases associated with a variety of cellular activities AYR67_12275 SM01086 C-terminal, D2-small domain, of ClpB protein AYR67_12295 SM00100 Cyclic nucleotide-monophosphate binding domain AYR67_12295 SM00419 helix_turn_helix, cAMP Regulatory protein AYR67_12325 SM00788 Adenylosuccinate synthetase AYR67_12335 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR67_12340 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYR67_12430 SM00857 Resolvase, N terminal domain AYR67_12450 SM00857 Resolvase, N terminal domain AYR67_12480 SM00267 diguanylate cyclase AYR67_12490 SM00479 AYR67_12490 AYR67_12510 SM00382 ATPases associated with a variety of cellular activities AYR67_12530 SM00257 Lysin motif AYR67_12535 SM00479 AYR67_12535 AYR67_12590 SM00422 helix_turn_helix, mercury resistance AYR67_12610 SM01011 Aminopeptidase P, N-terminal domain AYR67_12855 SM00530 Helix-turn-helix XRE-family like proteins AYR67_12970 SM00530 Helix-turn-helix XRE-family like proteins AYR67_13000 SM00287 Bacterial SH3 domain homologues AYR67_13185 SM00530 Helix-turn-helix XRE-family like proteins AYR67_13285 SM00382 ATPases associated with a variety of cellular activities AYR67_13285 SM00464 Found in ATP-dependent protease La (LON) AYR67_13305 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR67_13315 SM00478 endonuclease III AYR67_13360 SM00988 UreE urease accessory protein, N-terminal domain AYR67_13405 SM01091 Transporter associated domain AYR67_13515 SM00382 ATPases associated with a variety of cellular activities AYR67_13525 SM00947 Carbonic anhydrase AYR67_13625 SM01040 BRO family, N-terminal domain AYR67_13675 SM01004 Delta-aminolevulinic acid dehydratase AYR67_13720 SM00382 ATPases associated with a variety of cellular activities AYR67_13795 SM00563 Phosphate acyltransferases AYR67_13835 SM00843 AYR67_13835 AYR67_13875 SM00838 Elongation factor G C-terminus AYR67_13875 SM00889 Elongation factor G, domain IV AYR67_13895 SM00825 Beta-ketoacyl synthase AYR67_13955 SM01329 AYR67_13955 AYR67_14005 SM00363 S4 RNA-binding domain AYR67_14015 SM00400 zinc finger AYR67_14015 SM00493 AYR67_14015 AYR67_14025 SM00028 Tetratricopeptide repeats AYR67_14060 SM01400 AYR67_14060 AYR67_14105 SM00257 Lysin motif AYR67_14115 SM00822 AYR67_14115 AYR67_14120 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AYR67_14155 SM00363 S4 RNA-binding domain AYR67_14205 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYR67_14205 SM00292 breast cancer carboxy-terminal domain AYR67_14205 SM00532 Ligase N family AYR67_14210 SM00771 ZipA, C-terminal domain (FtsZ-binding) AYR67_14220 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_14240 SM00382 ATPases associated with a variety of cellular activities AYR67_14240 SM00962 SRP54-type protein, GTPase domain AYR67_14240 SM00963 SRP54-type protein, helical bundle domain AYR67_14380 SM00357 Cold shock protein domain AYR67_14425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYR67_14425 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYR67_14430 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AYR67_14455 SM00267 diguanylate cyclase AYR67_14465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR67_14465 SM00387 Histidine kinase-like ATPases AYR67_14465 SM00388 His Kinase A (phosphoacceptor) domain AYR67_14470 SM00448 cheY-homologous receiver domain AYR67_14470 SM00862 Transcriptional regulatory protein, C terminal AYR67_14500 SM00387 Histidine kinase-like ATPases AYR67_14570 SM00564 beta-propeller repeat AYR67_14615 SM00903 Flavin reductase like domain AYR67_14655 SM00342 helix_turn_helix, arabinose operon control protein AYR67_14945 SM00331 Sigma factor PP2C-like phosphatases AYR67_14965 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR67_14975 SM00382 ATPases associated with a variety of cellular activities AYR67_15010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYR67_15010 SM00474 3'-5' exonuclease AYR67_15010 SM00475 5'-3' exonuclease AYR67_15010 SM00482 DNA polymerase A domain AYR67_15025 SM00977 TilS substrate C-terminal domain AYR67_15045 SM00357 Cold shock protein domain AYR67_15045 SM00382 ATPases associated with a variety of cellular activities AYR67_15045 SM00959 Rho termination factor, N-terminal domain AYR67_15055 SM00411 bacterial (prokaryotic) histone like domain AYR67_15060 SM00873 B3/4 domain AYR67_15060 SM00874 tRNA synthetase B5 domain AYR67_15060 SM00896 Ferredoxin-fold anticodon binding domain AYR67_15115 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYR67_15160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYR67_15175 SM00954 Region found in RelA / SpoT proteins AYR67_15195 SM00073 Histidine Phosphotransfer domain AYR67_15195 SM00387 Histidine kinase-like ATPases AYR67_15195 SM00388 His Kinase A (phosphoacceptor) domain AYR67_15195 SM00448 cheY-homologous receiver domain AYR67_15235 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYR67_15235 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYR67_15305 SM01236 AYR67_15305 AYR67_15320 SM00052 Putative diguanylate phosphodiesterase AYR67_15320 SM00267 diguanylate cyclase AYR67_15365 SM00382 ATPases associated with a variety of cellular activities AYR67_15385 SM00479 AYR67_15385 AYR67_15395 SM00450 Rhodanese Homology Domain AYR67_15420 SM00825 Beta-ketoacyl synthase AYR67_15425 SM00822 AYR67_15425 AYR67_15435 SM00825 Beta-ketoacyl synthase AYR67_15500 SM00563 Phosphate acyltransferases AYR67_15515 SM00564 beta-propeller repeat AYR67_15540 SM00028 Tetratricopeptide repeats AYR67_15550 SM00562 AYR67_15550 AYR67_15560 SM00014 Acid phosphatase homologues AYR67_15570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR67_15570 SM00245 tail specific protease AYR67_15655 SM00382 ATPases associated with a variety of cellular activities AYR67_15655 SM00994 ClpX C4-type zinc finger AYR67_15655 SM01086 C-terminal, D2-small domain, of ClpB protein AYR67_15675 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AYR67_15680 SM00917 LeuA allosteric (dimerisation) domain AYR67_15695 SM00671 Sel1-like repeats. AYR67_15835 SM00360 RNA recognition motif AYR67_15855 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYR67_15855 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYR67_15855 SM00493 AYR67_15855 AYR67_15870 SM00829 Enoylreductase AYR67_15880 SM00382 ATPases associated with a variety of cellular activities AYR67_15910 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYR67_15925 SM00870 AYR67_15925 AYR67_15935 SM00342 helix_turn_helix, arabinose operon control protein AYR67_15940 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_15955 SM01329 AYR67_15955 AYR67_16005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYR67_16045 SM00363 S4 RNA-binding domain AYR67_16050 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_16080 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_16145 SM00849 Metallo-beta-lactamase superfamily AYR67_16180 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR67_16180 SM01091 Transporter associated domain AYR67_16210 SM00487 DEAD-like helicases superfamily AYR67_16210 SM00490 helicase superfamily c-terminal domain AYR67_16230 SM00271 DnaJ molecular chaperone homology domain AYR67_16245 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_16245 SM00322 K homology RNA-binding domain AYR67_16250 SM01387 AYR67_16250 AYR67_16260 SM00382 ATPases associated with a variety of cellular activities AYR67_16365 SM00316 Ribosomal protein S1-like RNA-binding domain AYR67_16425 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYR67_16450 SM00732 Likely ribonuclease with RNase H fold. AYR67_16470 SM00346 helix_turn_helix isocitrate lyase regulation AYR67_16480 SM00342 helix_turn_helix, arabinose operon control protein AYR67_16495 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYR67_16495 SM00465 GIY-YIG type nucleases (URI domain) AYR67_16540 SM00422 helix_turn_helix, mercury resistance AYR67_16565 SM00387 Histidine kinase-like ATPases AYR67_16605 SM00663 RNA polymerase I subunit A N-terminus AYR67_16630 SM00649 Ribosomal protein L11/L12 AYR67_16635 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AYR67_16635 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYR67_16685 SM00240 Forkhead associated domain AYR67_16695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR67_16705 SM00528 Domain in histone-like proteins of HNS family AYR67_16735 SM00448 cheY-homologous receiver domain AYR67_16735 SM00850 LytTr DNA-binding domain AYR67_16825 SM00899 AYR67_16825 AYR67_16855 SM00421 helix_turn_helix, Lux Regulon AYR67_16855 SM00448 cheY-homologous receiver domain AYR67_16860 SM00387 Histidine kinase-like ATPases AYR67_16860 SM00388 His Kinase A (phosphoacceptor) domain AYR67_16865 SM00382 ATPases associated with a variety of cellular activities AYR67_16865 SM00448 cheY-homologous receiver domain AYR67_16870 SM00245 tail specific protease AYR67_16935 SM00938 Nitrogen regulatory protein P-II AYR67_17065 SM00382 ATPases associated with a variety of cellular activities AYR67_17220 SM00382 ATPases associated with a variety of cellular activities AYR67_17245 SM01007 Class II Aldolase and Adducin N-terminal domain AYR67_17250 SM01130 AYR67_17250 AYR67_17285 SM00434 DNA Topoisomerase IV AYR67_17305 SM01091 Transporter associated domain AYR67_17320 SM00641 Glycosyl hydrolases family 25 AYR67_17340 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR67_17350 SM00422 helix_turn_helix, mercury resistance AYR67_17465 SM00342 helix_turn_helix, arabinose operon control protein AYR67_17490 SM00382 ATPases associated with a variety of cellular activities AYR67_17540 SM00382 ATPases associated with a variety of cellular activities AYR67_17560 SM00919 Malic enzyme, NAD binding domain AYR67_17560 SM01274 AYR67_17560 AYR67_17570 SM00836 DALR anticodon binding domain AYR67_17570 SM01016 Arginyl tRNA synthetase N terminal dom AYR67_17735 SM01005 Alanine racemase, C-terminal domain AYR67_17745 SM00344 helix_turn_helix ASNC type AYR67_17825 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_17825 SM00895 AYR67_17825 AYR67_17845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR67_17845 SM00895 AYR67_17845 AYR67_17870 SM00984 UDP binding domain AYR67_17945 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR67_17975 SM00984 UDP binding domain AYR67_17985 SM00226 Low molecular weight phosphatase family AYR67_18010 SM00644 AYR67_18010 AYR67_18090 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_18095 SM00062 Bacterial periplasmic substrate-binding proteins AYR67_18110 SM00382 ATPases associated with a variety of cellular activities AYR67_18130 SM00904 Riboflavin kinase AYR67_18155 SM00248 ankyrin repeats AYR67_18210 SM00849 Metallo-beta-lactamase superfamily AYR67_18230 SM00235 Zinc-dependent metalloprotease AYR67_18255 SM01001 AIR carboxylase AYR67_18285 SM00014 Acid phosphatase homologues AYR67_18355 SM01234 AYR67_18355