locus-tag class description GOD87_00010 PF00487 Fatty acid desaturase GOD87_00015 PF01138 3' exoribonuclease family, domain 1 GOD87_00015 PF03725 3' exoribonuclease family, domain 2 GOD87_00025 PF04185 Phosphoesterase family GOD87_00025 PF05506 Domain of unknown function (DUF756) GOD87_00035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GOD87_00035 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GOD87_00040 PF01510 N-acetylmuramoyl-L-alanine amidase GOD87_00045 PF03023 Lipid II flippase MurJ GOD87_00050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOD87_00050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GOD87_00055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOD87_00055 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GOD87_00060 PF13807 G-rich domain on putative tyrosine kinase GOD87_00060 PF02706 Chain length determinant protein GOD87_00060 PF13614 AAA domain GOD87_00065 PF01451 Low molecular weight phosphotyrosine protein phosphatase GOD87_00070 PF10531 SLBB domain GOD87_00070 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GOD87_00070 PF02563 Polysaccharide biosynthesis/export protein GOD87_00075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GOD87_00075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GOD87_00075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GOD87_00080 PF02719 Polysaccharide biosynthesis protein GOD87_00085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GOD87_00090 PF02348 Cytidylyltransferase GOD87_00105 PF03102 NeuB family GOD87_00105 PF08666 SAF domain GOD87_00135 PF00535 Glycosyl transferase family 2 GOD87_00140 PF02397 Bacterial sugar transferase GOD87_00145 PF00483 Nucleotidyl transferase GOD87_00150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GOD87_00150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GOD87_00150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GOD87_00155 PF00342 Phosphoglucose isomerase GOD87_00160 PF16363 GDP-mannose 4,6 dehydratase GOD87_00170 PF13340 Putative transposase of IS4/5 family (DUF4096) GOD87_00190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GOD87_00190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GOD87_00190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GOD87_00190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GOD87_00195 PF02652 L-lactate permease GOD87_00200 PF07729 FCD domain GOD87_00200 PF00392 Bacterial regulatory proteins, gntR family GOD87_00205 PF01070 FMN-dependent dehydrogenase GOD87_00210 PF09330 D-lactate dehydrogenase, membrane binding GOD87_00210 PF01565 FAD binding domain GOD87_00215 PF00155 Aminotransferase class I and II GOD87_00225 PF00392 Bacterial regulatory proteins, gntR family GOD87_00225 PF07729 FCD domain GOD87_00235 PF00285 Citrate synthase, C-terminal domain GOD87_00240 PF00694 Aconitase C-terminal domain GOD87_00240 PF00330 Aconitase family (aconitate hydratase) GOD87_00260 PF00293 NUDIX domain GOD87_00280 PF00109 Beta-ketoacyl synthase, N-terminal domain GOD87_00280 PF02801 Beta-ketoacyl synthase, C-terminal domain GOD87_00295 PF00849 RNA pseudouridylate synthase GOD87_00310 PF00593 TonB dependent receptor GOD87_00310 PF07715 TonB-dependent Receptor Plug Domain GOD87_00320 PF01037 Lrp/AsnC ligand binding domain GOD87_00325 PF01266 FAD dependent oxidoreductase GOD87_00330 PF01168 Alanine racemase, N-terminal domain GOD87_00330 PF00842 Alanine racemase, C-terminal domain GOD87_00335 PF01042 Endoribonuclease L-PSP GOD87_00340 PF00324 Amino acid permease GOD87_00345 PF00324 Amino acid permease GOD87_00355 PF00171 Aldehyde dehydrogenase family GOD87_00360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOD87_00360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOD87_00365 PF00501 AMP-binding enzyme GOD87_00365 PF13193 AMP-binding enzyme C-terminal domain GOD87_00370 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_00370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_00370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_00375 PF00378 Enoyl-CoA hydratase/isomerase GOD87_00380 PF00378 Enoyl-CoA hydratase/isomerase GOD87_00385 PF07690 Major Facilitator Superfamily GOD87_00385 PF00083 Sugar (and other) transporter GOD87_00390 PF00765 Autoinducer synthase GOD87_00400 PF00196 Bacterial regulatory proteins, luxR family GOD87_00400 PF03472 Autoinducer binding domain GOD87_00405 PF00501 AMP-binding enzyme GOD87_00410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_00410 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_00410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_00415 PF00550 Phosphopantetheine attachment site GOD87_00415 PF00109 Beta-ketoacyl synthase, N-terminal domain GOD87_00415 PF02801 Beta-ketoacyl synthase, C-terminal domain GOD87_00415 PF14765 Polyketide synthase dehydratase GOD87_00415 PF08659 KR domain GOD87_00415 PF16197 Ketoacyl-synthetase C-terminal extension GOD87_00420 PF13193 AMP-binding enzyme C-terminal domain GOD87_00420 PF00975 Thioesterase domain GOD87_00420 PF00501 AMP-binding enzyme GOD87_00420 PF00550 Phosphopantetheine attachment site GOD87_00420 PF00668 Condensation domain GOD87_00435 PF16363 GDP-mannose 4,6 dehydratase GOD87_00440 PF01648 4'-phosphopantetheinyl transferase superfamily GOD87_00455 PF01722 BolA-like protein GOD87_00465 PF13614 AAA domain GOD87_00480 PF09335 SNARE associated Golgi protein GOD87_00485 PF07681 DoxX GOD87_00490 PF04286 Protein of unknown function (DUF445) GOD87_00495 PF00117 Glutamine amidotransferase class-I GOD87_00495 PF00958 GMP synthase C terminal domain GOD87_00495 PF02540 NAD synthase GOD87_00500 PF01909 Nucleotidyltransferase domain GOD87_00500 PF13427 Domain of unknown function (DUF4111) GOD87_00505 PF03551 Transcriptional regulator PadR-like family GOD87_00515 PF02678 Pirin GOD87_00515 PF05726 Pirin C-terminal cupin domain GOD87_00535 PF00750 tRNA synthetases class I (R) GOD87_00535 PF03485 Arginyl tRNA synthetase N terminal domain GOD87_00535 PF05746 DALR anticodon binding domain GOD87_00540 PF00390 Malic enzyme, N-terminal domain GOD87_00540 PF03949 Malic enzyme, NAD binding domain GOD87_00550 PF04261 Dyp-type peroxidase family GOD87_00555 PF01810 LysE type translocator GOD87_00560 PF00950 ABC 3 transport family GOD87_00565 PF00005 ABC transporter GOD87_00585 PF00119 ATP synthase A chain GOD87_00590 PF00137 ATP synthase subunit C GOD87_00595 PF00430 ATP synthase B/B' CF(0) GOD87_00600 PF00213 ATP synthase delta (OSCP) subunit GOD87_00605 PF00306 ATP synthase alpha/beta chain, C terminal domain GOD87_00605 PF02874 ATP synthase alpha/beta family, beta-barrel domain GOD87_00605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOD87_00610 PF00231 ATP synthase GOD87_00615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOD87_00615 PF02874 ATP synthase alpha/beta family, beta-barrel domain GOD87_00620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GOD87_00625 PF11008 Protein of unknown function (DUF2846) GOD87_00635 PF00255 Glutathione peroxidase GOD87_00645 PF07690 Major Facilitator Superfamily GOD87_00650 PF00440 Bacterial regulatory proteins, tetR family GOD87_00655 PF00892 EamA-like transporter family GOD87_00660 PF01300 Telomere recombination GOD87_00665 PF02481 DNA recombination-mediator protein A GOD87_00665 PF17782 DprA winged helix domain GOD87_00675 PF01327 Polypeptide deformylase GOD87_00700 PF00440 Bacterial regulatory proteins, tetR family GOD87_00735 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_00745 PF03358 NADPH-dependent FMN reductase GOD87_00765 PF04055 Radical SAM superfamily GOD87_00765 PF08497 Radical SAM N-terminal GOD87_00765 PF11842 Domain of unknown function (DUF3362) GOD87_00780 PF11798 IMS family HHH motif GOD87_00780 PF11799 impB/mucB/samB family C-terminal domain GOD87_00780 PF00817 impB/mucB/samB family GOD87_00790 PF07690 Major Facilitator Superfamily GOD87_00795 PF03641 Possible lysine decarboxylase GOD87_00800 PF03471 Transporter associated domain GOD87_00800 PF03741 Integral membrane protein TerC family GOD87_00805 PF02810 SEC-C motif GOD87_00810 PF03458 UPF0126 domain GOD87_00815 PF07690 Major Facilitator Superfamily GOD87_00820 PF00521 DNA gyrase/topoisomerase IV, subunit A GOD87_00820 PF03989 DNA gyrase C-terminal domain, beta-propeller GOD87_00825 PF13193 AMP-binding enzyme C-terminal domain GOD87_00825 PF00501 AMP-binding enzyme GOD87_00840 PF00719 Inorganic pyrophosphatase GOD87_00845 PF03573 outer membrane porin, OprD family GOD87_00855 PF00701 Dihydrodipicolinate synthetase family GOD87_00865 PF00392 Bacterial regulatory proteins, gntR family GOD87_00865 PF00155 Aminotransferase class I and II GOD87_00870 PF13335 Magnesium chelatase, subunit ChlI C-terminal GOD87_00870 PF01078 Magnesium chelatase, subunit ChlI GOD87_00880 PF00543 Nitrogen regulatory protein P-II GOD87_00885 PF00909 Ammonium Transporter Family GOD87_00890 PF03477 ATP cone domain GOD87_00895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GOD87_00895 PF01872 RibD C-terminal domain GOD87_00905 PF00677 Lumazine binding domain GOD87_00925 PF02789 Cytosol aminopeptidase family, N-terminal domain GOD87_00925 PF00883 Cytosol aminopeptidase family, catalytic domain GOD87_00935 PF03739 Lipopolysaccharide export system permease LptF/LptG GOD87_00940 PF01676 Metalloenzyme superfamily GOD87_00940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GOD87_00945 PF00595 PDZ domain GOD87_00945 PF03572 Peptidase family S41 GOD87_00950 PF02954 Bacterial regulatory protein, Fis family GOD87_00950 PF00072 Response regulator receiver domain GOD87_00950 PF00158 Sigma-54 interaction domain GOD87_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_00955 PF00512 His Kinase A (phospho-acceptor) domain GOD87_00960 PF00196 Bacterial regulatory proteins, luxR family GOD87_00960 PF00072 Response regulator receiver domain GOD87_00965 PF00768 D-alanyl-D-alanine carboxypeptidase GOD87_00970 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_00975 PF01842 ACT domain GOD87_00975 PF00742 Homoserine dehydrogenase GOD87_00975 PF03447 Homoserine dehydrogenase, NAD binding domain GOD87_00980 PF13098 Thioredoxin-like domain GOD87_00980 PF10411 Disulfide bond isomerase protein N-terminus GOD87_00985 PF00589 Phage integrase family GOD87_00985 PF02899 Phage integrase, N-terminal SAM-like domain GOD87_00995 PF02421 Ferrous iron transport protein B GOD87_00995 PF07664 Ferrous iron transport protein B C terminus GOD87_00995 PF07670 Nucleoside recognition GOD87_01005 PF08245 Mur ligase middle domain GOD87_01005 PF02875 Mur ligase family, glutamate ligase domain GOD87_01010 PF01098 Cell cycle protein GOD87_01015 PF00749 tRNA synthetases class I (E and Q), catalytic domain GOD87_01020 PF01258 Prokaryotic dksA/traR C4-type zinc finger GOD87_01025 PF00149 Calcineurin-like phosphoesterase GOD87_01030 PF00293 NUDIX domain GOD87_01035 PF13667 ThiC-associated domain GOD87_01035 PF01964 Radical SAM ThiC family GOD87_01050 PF00892 EamA-like transporter family GOD87_01055 PF02321 Outer membrane efflux protein GOD87_01060 PF01895 PhoU domain GOD87_01065 PF04362 Bacterial Fe(2+) trafficking GOD87_01070 PF00206 Lyase GOD87_01070 PF14698 Argininosuccinate lyase C-terminal GOD87_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_01075 PF06580 Histidine kinase GOD87_01075 PF07694 5TMR of 5TMR-LYT GOD87_01080 PF00072 Response regulator receiver domain GOD87_01080 PF04397 LytTr DNA-binding domain GOD87_01085 PF03900 Porphobilinogen deaminase, C-terminal domain GOD87_01085 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GOD87_01110 PF00816 H-NS histone family GOD87_01125 PF00263 Bacterial type II and III secretion system protein GOD87_01125 PF03958 Bacterial type II/III secretion system short domain GOD87_01130 PF00498 FHA domain GOD87_01130 PF12401 Protein of unknown function (DUF2662) GOD87_01135 PF13419 Haloacid dehalogenase-like hydrolase GOD87_01140 PF00425 chorismate binding enzyme GOD87_01140 PF04715 Anthranilate synthase component I, N terminal region GOD87_01165 PF03143 Elongation factor Tu C-terminal domain GOD87_01165 PF00009 Elongation factor Tu GTP binding domain GOD87_01165 PF03144 Elongation factor Tu domain 2 GOD87_01175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GOD87_01180 PF00467 KOW motif GOD87_01180 PF02357 Transcription termination factor nusG GOD87_01185 PF03946 Ribosomal protein L11, N-terminal domain GOD87_01185 PF00298 Ribosomal protein L11, RNA binding domain GOD87_01190 PF00687 Ribosomal protein L1p/L10e family GOD87_01195 PF00466 Ribosomal protein L10 GOD87_01200 PF00542 Ribosomal protein L7/L12 C-terminal domain GOD87_01200 PF16320 Ribosomal protein L7/L12 dimerisation domain GOD87_01205 PF00562 RNA polymerase Rpb2, domain 6 GOD87_01205 PF10385 RNA polymerase beta subunit external 1 domain GOD87_01205 PF04565 RNA polymerase Rpb2, domain 3 GOD87_01205 PF04561 RNA polymerase Rpb2, domain 2 GOD87_01205 PF04560 RNA polymerase Rpb2, domain 7 GOD87_01205 PF04563 RNA polymerase beta subunit GOD87_01210 PF05000 RNA polymerase Rpb1, domain 4 GOD87_01210 PF04998 RNA polymerase Rpb1, domain 5 GOD87_01210 PF04997 RNA polymerase Rpb1, domain 1 GOD87_01210 PF00623 RNA polymerase Rpb1, domain 2 GOD87_01210 PF04983 RNA polymerase Rpb1, domain 3 GOD87_01235 PF13726 Na+-H+ antiporter family GOD87_01235 PF03553 Na+/H+ antiporter family GOD87_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_01250 PF00183 Hsp90 protein GOD87_01265 PF01323 DSBA-like thioredoxin domain GOD87_01275 PF09278 MerR, DNA binding GOD87_01275 PF00376 MerR family regulatory protein GOD87_01290 PF00108 Thiolase, N-terminal domain GOD87_01290 PF02803 Thiolase, C-terminal domain GOD87_01295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOD87_01295 PF00378 Enoyl-CoA hydratase/isomerase GOD87_01295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOD87_01310 PF02151 UvrB/uvrC motif GOD87_01310 PF08459 UvrC Helix-hairpin-helix N-terminal GOD87_01310 PF01541 GIY-YIG catalytic domain GOD87_01320 PF01066 CDP-alcohol phosphatidyltransferase GOD87_01325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GOD87_01325 PF12833 Helix-turn-helix domain GOD87_01325 PF02805 Metal binding domain of Ada GOD87_01325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GOD87_01350 PF13533 Biotin-lipoyl like GOD87_01355 PF03652 Holliday junction resolvase GOD87_01360 PF02622 Uncharacterized ACR, COG1678 GOD87_01365 PF02463 RecF/RecN/SMC N terminal domain GOD87_01375 PF06865 Pyrimidine/purine nucleoside phosphorylase GOD87_01380 PF08032 RNA 2'-O ribose methyltransferase substrate binding GOD87_01380 PF00588 SpoU rRNA Methylase family GOD87_01390 PF01121 Dephospho-CoA kinase GOD87_01395 PF06750 Bacterial Peptidase A24 N-terminal domain GOD87_01395 PF01478 Type IV leader peptidase family GOD87_01400 PF00482 Type II secretion system (T2SS), protein F GOD87_01405 PF00437 Type II/IV secretion system protein GOD87_01405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GOD87_01410 PF00121 Triosephosphate isomerase GOD87_01415 PF03840 Preprotein translocase SecG subunit GOD87_01435 PF02576 RimP N-terminal domain GOD87_01435 PF17384 RimP C-terminal SH3 domain GOD87_01440 PF13184 NusA-like KH domain GOD87_01440 PF00575 S1 RNA binding domain GOD87_01440 PF08529 NusA N-terminal domain GOD87_01445 PF11987 Translation-initiation factor 2 GOD87_01445 PF04760 Translation initiation factor IF-2, N-terminal region GOD87_01445 PF00009 Elongation factor Tu GTP binding domain GOD87_01445 PF08364 Bacterial translation initiation factor IF-2 associated region GOD87_01450 PF02033 Ribosome-binding factor A GOD87_01460 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GOD87_01470 PF00361 Proton-conducting membrane transporter GOD87_01475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GOD87_01480 PF13244 Domain of unknown function (DUF4040) GOD87_01480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GOD87_01480 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GOD87_01480 PF00361 Proton-conducting membrane transporter GOD87_01495 PF01502 Phosphoribosyl-AMP cyclohydrolase GOD87_01500 PF01494 FAD binding domain GOD87_01505 PF03109 ABC1 family GOD87_01515 PF01209 ubiE/COQ5 methyltransferase family GOD87_01525 PF03976 Polyphosphate kinase 2 (PPK2) GOD87_01535 PF17946 RecC C-terminal domain GOD87_01540 PF12705 PD-(D/E)XK nuclease superfamily GOD87_01540 PF13361 UvrD-like helicase C-terminal domain GOD87_01540 PF00580 UvrD/REP helicase N-terminal domain GOD87_01545 PF13538 UvrD-like helicase C-terminal domain GOD87_01555 PF00312 Ribosomal protein S15 GOD87_01560 PF00575 S1 RNA binding domain GOD87_01560 PF00013 KH domain GOD87_01560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GOD87_01560 PF01138 3' exoribonuclease family, domain 1 GOD87_01560 PF03725 3' exoribonuclease family, domain 2 GOD87_01565 PF01544 CorA-like Mg2+ transporter protein GOD87_01575 PF00226 DnaJ domain GOD87_01575 PF01556 DnaJ C terminal domain GOD87_01585 PF01430 Hsp33 protein GOD87_01590 PF00999 Sodium/hydrogen exchanger family GOD87_01590 PF02254 TrkA-N domain GOD87_01595 PF17764 3′ DNA-binding domain (3′BD) GOD87_01595 PF18074 Primosomal protein N C-terminal domain GOD87_01595 PF00270 DEAD/DEAH box helicase GOD87_01595 PF00271 Helicase conserved C-terminal domain GOD87_01595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GOD87_01600 PF00482 Type II secretion system (T2SS), protein F GOD87_01605 PF08334 Type II secretion system (T2SS), protein G GOD87_01605 PF07963 Prokaryotic N-terminal methylation motif GOD87_01615 PF01588 Putative tRNA binding domain GOD87_01620 PF00795 Carbon-nitrogen hydrolase GOD87_01625 PF00571 CBS domain GOD87_01625 PF03471 Transporter associated domain GOD87_01630 PF01206 Sulfurtransferase TusA GOD87_01650 PF01177 Asp/Glu/Hydantoin racemase GOD87_01660 PF00762 Ferrochelatase GOD87_01665 PF00753 Metallo-beta-lactamase superfamily GOD87_01670 PF03884 DNA gyrase inhibitor YacG GOD87_01690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GOD87_01705 PF01197 Ribosomal protein L31 GOD87_01710 PF03109 ABC1 family GOD87_01715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_01715 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOD87_01720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOD87_01720 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_01720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_01725 PF01554 MatE GOD87_01735 PF06969 HemN C-terminal domain GOD87_01735 PF04055 Radical SAM superfamily GOD87_01740 PF00106 short chain dehydrogenase GOD87_01745 PF03466 LysR substrate binding domain GOD87_01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_01760 PF13193 AMP-binding enzyme C-terminal domain GOD87_01760 PF00501 AMP-binding enzyme GOD87_01765 PF12111 Polyribonucleotide phosphorylase C terminal GOD87_01765 PF10150 Ribonuclease E/G family GOD87_01765 PF00575 S1 RNA binding domain GOD87_01770 PF00849 RNA pseudouridylate synthase GOD87_01770 PF01479 S4 domain GOD87_01775 PF13419 Haloacid dehalogenase-like hydrolase GOD87_01780 PF08279 HTH domain GOD87_01780 PF13280 WYL domain GOD87_01785 PF02798 Glutathione S-transferase, N-terminal domain GOD87_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_01795 PF03466 LysR substrate binding domain GOD87_01800 PF12706 Beta-lactamase superfamily domain GOD87_01805 PF00141 Peroxidase GOD87_01810 PF01590 GAF domain GOD87_01810 PF05524 PEP-utilising enzyme, N-terminal GOD87_01810 PF00391 PEP-utilising enzyme, mobile domain GOD87_01810 PF02896 PEP-utilising enzyme, TIM barrel domain GOD87_01815 PF00293 NUDIX domain GOD87_01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_01835 PF03466 LysR substrate binding domain GOD87_01845 PF00330 Aconitase family (aconitate hydratase) GOD87_01850 PF00694 Aconitase C-terminal domain GOD87_01860 PF00180 Isocitrate/isopropylmalate dehydrogenase GOD87_01875 PF01176 Translation initiation factor 1A / IF-1 GOD87_01885 PF01416 tRNA pseudouridine synthase GOD87_01905 PF01118 Semialdehyde dehydrogenase, NAD binding domain GOD87_01905 PF02774 Semialdehyde dehydrogenase, dimerisation domain GOD87_01915 PF00375 Sodium:dicarboxylate symporter family GOD87_01925 PF03279 Bacterial lipid A biosynthesis acyltransferase GOD87_01930 PF01810 LysE type translocator GOD87_01945 PF00107 Zinc-binding dehydrogenase GOD87_01945 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_01950 PF01638 HxlR-like helix-turn-helix GOD87_01960 PF08272 Topoisomerase I zinc-ribbon-like GOD87_01960 PF01751 Toprim domain GOD87_01960 PF01131 DNA topoisomerase GOD87_01960 PF01396 Topoisomerase DNA binding C4 zinc finger GOD87_01975 PF00580 UvrD/REP helicase N-terminal domain GOD87_01975 PF13361 UvrD-like helicase C-terminal domain GOD87_01980 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GOD87_02000 PF02254 TrkA-N domain GOD87_02000 PF00999 Sodium/hydrogen exchanger family GOD87_02005 PF00471 Ribosomal protein L33 GOD87_02010 PF00830 Ribosomal L28 family GOD87_02015 PF00171 Aldehyde dehydrogenase family GOD87_02025 PF00551 Formyl transferase GOD87_02025 PF01842 ACT domain GOD87_02035 PF01618 MotA/TolQ/ExbB proton channel family GOD87_02045 PF01625 Peptide methionine sulfoxide reductase GOD87_02055 PF00186 Dihydrofolate reductase GOD87_02060 PF00303 Thymidylate synthase GOD87_02075 PF01790 Prolipoprotein diacylglyceryl transferase GOD87_02095 PF00902 Sec-independent protein translocase protein (TatC) GOD87_02100 PF02416 mttA/Hcf106 family GOD87_02105 PF02416 mttA/Hcf106 family GOD87_02115 PF01725 Ham1 family GOD87_02125 PF00561 alpha/beta hydrolase fold GOD87_02125 PF07021 Methionine biosynthesis protein MetW GOD87_02130 PF00561 alpha/beta hydrolase fold GOD87_02135 PF00682 HMGL-like GOD87_02135 PF08502 LeuA allosteric (dimerisation) domain GOD87_02140 PF18331 PKHD-type hydroxylase C-terminal domain GOD87_02140 PF13640 2OG-Fe(II) oxygenase superfamily GOD87_02145 PF07715 TonB-dependent Receptor Plug Domain GOD87_02145 PF00593 TonB dependent receptor GOD87_02150 PF05697 Bacterial trigger factor protein (TF) GOD87_02150 PF05698 Bacterial trigger factor protein (TF) C-terminus GOD87_02150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOD87_02155 PF00574 Clp protease GOD87_02160 PF06689 ClpX C4-type zinc finger GOD87_02160 PF10431 C-terminal, D2-small domain, of ClpB protein GOD87_02160 PF07724 AAA domain (Cdc48 subfamily) GOD87_02175 PF05681 Fumarate hydratase (Fumerase) GOD87_02175 PF05683 Fumarase C-terminus GOD87_02180 PF07085 DRTGG domain GOD87_02180 PF01515 Phosphate acetyl/butaryl transferase GOD87_02185 PF00871 Acetokinase family GOD87_02190 PF00920 Dehydratase family GOD87_02195 PF01081 KDPG and KHG aldolase GOD87_02200 PF02447 GntP family permease GOD87_02205 PF01202 Shikimate kinase GOD87_02210 PF00171 Aldehyde dehydrogenase family GOD87_02215 PF00171 Aldehyde dehydrogenase family GOD87_02220 PF00561 alpha/beta hydrolase fold GOD87_02230 PF00933 Glycosyl hydrolase family 3 N terminal domain GOD87_02235 PF00595 PDZ domain GOD87_02235 PF11818 C-terminal domain of tail specific protease (DUF3340) GOD87_02235 PF17804 Tail specific protease N-terminal domain GOD87_02235 PF03572 Peptidase family S41 GOD87_02240 PF13439 Glycosyltransferase Family 4 GOD87_02240 PF00534 Glycosyl transferases group 1 GOD87_02245 PF01569 PAP2 superfamily GOD87_02250 PF04384 Iron-sulphur cluster assembly GOD87_02255 PF00334 Nucleoside diphosphate kinase GOD87_02260 PF04055 Radical SAM superfamily GOD87_02270 PF13464 Domain of unknown function (DUF4115) GOD87_02275 PF04551 GcpE protein GOD87_02280 PF03129 Anticodon binding domain GOD87_02280 PF13393 Histidyl-tRNA synthetase GOD87_02290 PF13360 PQQ-like domain GOD87_02295 PF01926 50S ribosome-binding GTPase GOD87_02295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GOD87_02305 PF02556 Preprotein translocase subunit SecB GOD87_02310 PF00462 Glutaredoxin GOD87_02320 PF03193 RsgA GTPase GOD87_02325 PF00929 Exonuclease GOD87_02340 PF02321 Outer membrane efflux protein GOD87_02345 PF12704 MacB-like periplasmic core domain GOD87_02345 PF00005 ABC transporter GOD87_02345 PF02687 FtsX-like permease family GOD87_02350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_02365 PF08264 Anticodon-binding domain of tRNA GOD87_02365 PF09334 tRNA synthetases class I (M) GOD87_02365 PF13603 Leucyl-tRNA synthetase, Domain 2 GOD87_02365 PF00133 tRNA synthetases class I (I, L, M and V) GOD87_02375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOD87_02375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOD87_02375 PF00205 Thiamine pyrophosphate enzyme, central domain GOD87_02380 PF10369 Small subunit of acetolactate synthase GOD87_02385 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GOD87_02385 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GOD87_02390 PF00990 Diguanylate cyclase, GGDEF domain GOD87_02390 PF03707 Bacterial signalling protein N terminal repeat GOD87_02390 PF00563 EAL domain GOD87_02410 PF03144 Elongation factor Tu domain 2 GOD87_02410 PF16658 Class II release factor RF3, C-terminal domain GOD87_02410 PF00009 Elongation factor Tu GTP binding domain GOD87_02425 PF01026 TatD related DNase GOD87_02430 PF00330 Aconitase family (aconitate hydratase) GOD87_02430 PF00694 Aconitase C-terminal domain GOD87_02435 PF00899 ThiF family GOD87_02445 PF03466 LysR substrate binding domain GOD87_02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_02455 PF01207 Dihydrouridine synthase (Dus) GOD87_02460 PF00589 Phage integrase family GOD87_02535 PF04945 YHS domain GOD87_02540 PF00512 His Kinase A (phospho-acceptor) domain GOD87_02540 PF00672 HAMP domain GOD87_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_02545 PF00072 Response regulator receiver domain GOD87_02545 PF00486 Transcriptional regulatory protein, C terminal GOD87_02555 PF07732 Multicopper oxidase GOD87_02555 PF07731 Multicopper oxidase GOD87_02555 PF00394 Multicopper oxidase GOD87_02575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_02580 PF00873 AcrB/AcrD/AcrF family GOD87_02590 PF07670 Nucleoside recognition GOD87_02590 PF02421 Ferrous iron transport protein B GOD87_02590 PF07664 Ferrous iron transport protein B C terminus GOD87_02605 PF13411 MerR HTH family regulatory protein GOD87_02610 PF03960 ArsC family GOD87_02615 PF01022 Bacterial regulatory protein, arsR family GOD87_02625 PF01758 Sodium Bile acid symporter family GOD87_02630 PF03358 NADPH-dependent FMN reductase GOD87_02635 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_02665 PF07690 Major Facilitator Superfamily GOD87_02675 PF00892 EamA-like transporter family GOD87_02680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GOD87_02680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GOD87_02685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GOD87_02690 PF02233 NAD(P) transhydrogenase beta subunit GOD87_02695 PF00106 short chain dehydrogenase GOD87_02705 PF01261 Xylose isomerase-like TIM barrel GOD87_02710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOD87_02710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOD87_02715 PF00378 Enoyl-CoA hydratase/isomerase GOD87_02720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GOD87_02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_02720 PF01627 Hpt domain GOD87_02720 PF00072 Response regulator receiver domain GOD87_02720 PF00512 His Kinase A (phospho-acceptor) domain GOD87_02720 PF00672 HAMP domain GOD87_02725 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_02735 PF05958 tRNA (Uracil-5-)-methyltransferase GOD87_02740 PF02824 TGS domain GOD87_02740 PF13291 ACT domain GOD87_02740 PF04607 Region found in RelA / SpoT proteins GOD87_02750 PF03819 MazG nucleotide pyrophosphohydrolase domain GOD87_02760 PF12626 Polymerase A arginine-rich C-terminus GOD87_02760 PF12627 Probable RNA and SrmB- binding site of polymerase A GOD87_02760 PF01743 Poly A polymerase head domain GOD87_02765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GOD87_02770 PF02548 Ketopantoate hydroxymethyltransferase GOD87_02775 PF02569 Pantoate-beta-alanine ligase GOD87_02780 PF03668 P-loop ATPase protein family GOD87_02785 PF00381 PTS HPr component phosphorylation site GOD87_02790 PF04751 Protein of unknown function (DUF615) GOD87_02795 PF00501 AMP-binding enzyme GOD87_02795 PF13193 AMP-binding enzyme C-terminal domain GOD87_02800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GOD87_02800 PF03129 Anticodon binding domain GOD87_02800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GOD87_02800 PF02824 TGS domain GOD87_02805 PF00707 Translation initiation factor IF-3, C-terminal domain GOD87_02805 PF05198 Translation initiation factor IF-3, N-terminal domain GOD87_02810 PF02798 Glutathione S-transferase, N-terminal domain GOD87_02810 PF00043 Glutathione S-transferase, C-terminal domain GOD87_02815 PF09335 SNARE associated Golgi protein GOD87_02820 PF07690 Major Facilitator Superfamily GOD87_02825 PF01632 Ribosomal protein L35 GOD87_02830 PF00453 Ribosomal protein L20 GOD87_02850 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GOD87_02850 PF01409 tRNA synthetases class II core domain (F) GOD87_02855 PF01588 Putative tRNA binding domain GOD87_02855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GOD87_02855 PF03147 Ferredoxin-fold anticodon binding domain GOD87_02855 PF03483 B3/4 domain GOD87_02855 PF03484 tRNA synthetase B5 domain GOD87_02860 PF00216 Bacterial DNA-binding protein GOD87_02875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOD87_02875 PF07498 Rho termination factor, N-terminal domain GOD87_02875 PF07497 Rho termination factor, RNA-binding domain GOD87_02880 PF00085 Thioredoxin GOD87_02885 PF02541 Ppx/GppA phosphatase family GOD87_02890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GOD87_02895 PF01171 PP-loop family GOD87_02895 PF09179 TilS substrate binding domain GOD87_02895 PF11734 TilS substrate C-terminal domain GOD87_02900 PF14748 Pyrroline-5-carboxylate reductase dimerisation GOD87_02900 PF03807 NADP oxidoreductase coenzyme F420-dependent GOD87_02905 PF02325 YGGT family GOD87_02910 PF01612 3'-5' exonuclease GOD87_02910 PF00476 DNA polymerase family A GOD87_02910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GOD87_02910 PF01367 5'-3' exonuclease, C-terminal SAM fold GOD87_02930 PF00437 Type II/IV secretion system protein GOD87_02935 PF02566 OsmC-like protein GOD87_02940 PF01047 MarR family GOD87_02950 PF00795 Carbon-nitrogen hydrolase GOD87_02995 PF00309 Sigma-54 factor, Activator interacting domain (AID) GOD87_02995 PF04552 Sigma-54, DNA binding domain GOD87_02995 PF04963 Sigma-54 factor, core binding domain GOD87_03000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GOD87_03005 PF01722 BolA-like protein GOD87_03010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GOD87_03015 PF01634 ATP phosphoribosyltransferase GOD87_03020 PF00815 Histidinol dehydrogenase GOD87_03025 PF00155 Aminotransferase class I and II GOD87_03030 PF00425 chorismate binding enzyme GOD87_03030 PF04715 Anthranilate synthase component I, N terminal region GOD87_03070 PF00293 NUDIX domain GOD87_03075 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_03080 PF00814 Glycoprotease family GOD87_03085 PF04445 Putative SAM-dependent methyltransferase GOD87_03095 PF00756 Putative esterase GOD87_03105 PF00834 Ribulose-phosphate 3 epimerase family GOD87_03120 PF00394 Multicopper oxidase GOD87_03120 PF07732 Multicopper oxidase GOD87_03120 PF07731 Multicopper oxidase GOD87_03135 PF00893 Small Multidrug Resistance protein GOD87_03140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GOD87_03140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GOD87_03145 PF01960 ArgJ family GOD87_03150 PF02445 Quinolinate synthetase A protein GOD87_03175 PF00962 Adenosine/AMP deaminase GOD87_03180 PF00107 Zinc-binding dehydrogenase GOD87_03180 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_03185 PF03466 LysR substrate binding domain GOD87_03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_03190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_03190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_03190 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_03195 PF07690 Major Facilitator Superfamily GOD87_03200 PF02515 CoA-transferase family III GOD87_03210 PF00890 FAD binding domain GOD87_03210 PF14537 Cytochrome c3 GOD87_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_03215 PF03466 LysR substrate binding domain GOD87_03225 PF07690 Major Facilitator Superfamily GOD87_03230 PF03466 LysR substrate binding domain GOD87_03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_03270 PF01717 Cobalamin-independent synthase, Catalytic domain GOD87_03270 PF08267 Cobalamin-independent synthase, N-terminal domain GOD87_03275 PF01613 Flavin reductase like domain GOD87_03315 PF17074 Darcynin, domain of unknown function GOD87_03330 PF00268 Ribonucleotide reductase, small chain GOD87_03340 PF00317 Ribonucleotide reductase, all-alpha domain GOD87_03340 PF02867 Ribonucleotide reductase, barrel domain GOD87_03340 PF03477 ATP cone domain GOD87_03350 PF00486 Transcriptional regulatory protein, C terminal GOD87_03350 PF00072 Response regulator receiver domain GOD87_03355 PF00512 His Kinase A (phospho-acceptor) domain GOD87_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_03355 PF00672 HAMP domain GOD87_03365 PF00990 Diguanylate cyclase, GGDEF domain GOD87_03365 PF17151 Periplasmic sensor domain GOD87_03370 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GOD87_03375 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GOD87_03380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GOD87_03380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GOD87_03390 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GOD87_03390 PF10531 SLBB domain GOD87_03390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GOD87_03395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GOD87_03395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOD87_03395 PF00384 Molybdopterin oxidoreductase GOD87_03400 PF00146 NADH dehydrogenase GOD87_03405 PF12838 4Fe-4S dicluster domain GOD87_03410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GOD87_03415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GOD87_03420 PF00361 Proton-conducting membrane transporter GOD87_03420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GOD87_03425 PF00361 Proton-conducting membrane transporter GOD87_03430 PF00361 Proton-conducting membrane transporter GOD87_03440 PF00313 'Cold-shock' DNA-binding domain GOD87_03445 PF03466 LysR substrate binding domain GOD87_03445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_03450 PF00175 Oxidoreductase NAD-binding domain GOD87_03450 PF00970 Oxidoreductase FAD-binding domain GOD87_03465 PF05552 Conserved TM helix GOD87_03480 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_03485 PF13533 Biotin-lipoyl like GOD87_03510 PF09334 tRNA synthetases class I (M) GOD87_03510 PF01588 Putative tRNA binding domain GOD87_03520 PF10609 NUBPL iron-transfer P-loop NTPase GOD87_03525 PF01048 Phosphorylase superfamily GOD87_03540 PF00692 dUTPase GOD87_03570 PF01207 Dihydrouridine synthase (Dus) GOD87_03580 PF00448 SRP54-type protein, GTPase domain GOD87_03580 PF02881 SRP54-type protein, helical bundle domain GOD87_03580 PF02978 Signal peptide binding domain GOD87_03585 PF03309 Type III pantothenate kinase GOD87_03595 PF01925 Sulfite exporter TauE/SafE GOD87_03605 PF06470 SMC proteins Flexible Hinge Domain GOD87_03605 PF02463 RecF/RecN/SMC N terminal domain GOD87_03615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GOD87_03615 PF01653 NAD-dependent DNA ligase adenylation domain GOD87_03615 PF12826 Helix-hairpin-helix motif GOD87_03615 PF03120 NAD-dependent DNA ligase OB-fold domain GOD87_03615 PF00533 BRCA1 C Terminus (BRCT) domain GOD87_03620 PF00210 Ferritin-like domain GOD87_03625 PF07690 Major Facilitator Superfamily GOD87_03630 PF00982 Glycosyltransferase family 20 GOD87_03635 PF02358 Trehalose-phosphatase GOD87_03640 PF08241 Methyltransferase domain GOD87_03640 PF12697 Alpha/beta hydrolase family GOD87_03645 PF04055 Radical SAM superfamily GOD87_03645 PF06968 Biotin and Thiamin Synthesis associated domain GOD87_03645 PF00202 Aminotransferase class-III GOD87_03650 PF00155 Aminotransferase class I and II GOD87_03665 PF00849 RNA pseudouridylate synthase GOD87_03665 PF01479 S4 domain GOD87_03670 PF04079 Segregation and condensation complex subunit ScpB GOD87_03675 PF02616 Segregation and condensation protein ScpA GOD87_03680 PF01300 Telomere recombination GOD87_03685 PF04315 Elongation factor P hydroxylase GOD87_03690 PF02620 Large ribosomal RNA subunit accumulation protein YceD GOD87_03695 PF01783 Ribosomal L32p protein family GOD87_03700 PF00698 Acyl transferase domain GOD87_03710 PF00550 Phosphopantetheine attachment site GOD87_03715 PF01476 LysM domain GOD87_03715 PF04972 BON domain GOD87_03720 PF08543 Phosphomethylpyrimidine kinase GOD87_03720 PF03070 TENA/THI-4/PQQC family GOD87_03720 PF02581 Thiamine monophosphate synthase GOD87_03730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GOD87_03745 PF02261 Aspartate decarboxylase GOD87_03750 PF01195 Peptidyl-tRNA hydrolase GOD87_03755 PF01386 Ribosomal L25p family GOD87_03760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GOD87_03760 PF14572 Phosphoribosyl synthetase-associated domain GOD87_03785 PF00288 GHMP kinases N terminal domain GOD87_03785 PF08544 GHMP kinases C terminal GOD87_03790 PF03550 Outer membrane lipoprotein LolB GOD87_03800 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GOD87_03800 PF01488 Shikimate / quinate 5-dehydrogenase GOD87_03800 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GOD87_03805 PF01807 CHC2 zinc finger GOD87_03805 PF10410 DnaB-helicase binding domain of primase GOD87_03805 PF08278 DNA primase DnaG DnaB-binding GOD87_03805 PF08275 DNA primase catalytic core, N-terminal domain GOD87_03810 PF13525 Outer membrane lipoprotein GOD87_03815 PF00849 RNA pseudouridylate synthase GOD87_03815 PF01479 S4 domain GOD87_03825 PF03358 NADPH-dependent FMN reductase GOD87_03830 PF01668 SmpB protein GOD87_03835 PF01467 Cytidylyltransferase-like GOD87_03840 PF00037 4Fe-4S binding domain GOD87_03865 PF00180 Isocitrate/isopropylmalate dehydrogenase GOD87_03870 PF02028 BCCT, betaine/carnitine/choline family transporter GOD87_03875 PF07859 alpha/beta hydrolase fold GOD87_03880 PF00355 Rieske [2Fe-2S] domain GOD87_03880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOD87_03885 PF00171 Aldehyde dehydrogenase family GOD87_03890 PF00970 Oxidoreductase FAD-binding domain GOD87_03890 PF00175 Oxidoreductase NAD-binding domain GOD87_03890 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_03905 PF00795 Carbon-nitrogen hydrolase GOD87_03905 PF02540 NAD synthase GOD87_03915 PF02678 Pirin GOD87_03915 PF05726 Pirin C-terminal cupin domain GOD87_03925 PF00109 Beta-ketoacyl synthase, N-terminal domain GOD87_03925 PF02801 Beta-ketoacyl synthase, C-terminal domain GOD87_03935 PF00164 Ribosomal protein S12/S23 GOD87_03940 PF00177 Ribosomal protein S7p/S5e GOD87_03945 PF03144 Elongation factor Tu domain 2 GOD87_03945 PF00009 Elongation factor Tu GTP binding domain GOD87_03945 PF14492 Elongation Factor G, domain II GOD87_03945 PF03764 Elongation factor G, domain IV GOD87_03945 PF00679 Elongation factor G C-terminus GOD87_03950 PF03144 Elongation factor Tu domain 2 GOD87_03950 PF03143 Elongation factor Tu C-terminal domain GOD87_03950 PF00009 Elongation factor Tu GTP binding domain GOD87_03965 PF00583 Acetyltransferase (GNAT) family GOD87_03970 PF04376 Arginine-tRNA-protein transferase, N terminus GOD87_03970 PF04377 Arginine-tRNA-protein transferase, C terminus GOD87_03975 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GOD87_03980 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_03985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GOD87_03985 PF17854 FtsK alpha domain GOD87_03985 PF09397 Ftsk gamma domain GOD87_03985 PF01580 FtsK/SpoIIIE family GOD87_03990 PF01810 LysE type translocator GOD87_04005 PF03776 Septum formation topological specificity factor MinE GOD87_04010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GOD87_04015 PF03775 Septum formation inhibitor MinC, C-terminal domain GOD87_04025 PF01553 Acyltransferase GOD87_04030 PF00691 OmpA family GOD87_04030 PF13488 Glycine zipper GOD87_04035 PF00580 UvrD/REP helicase N-terminal domain GOD87_04035 PF13361 UvrD-like helicase C-terminal domain GOD87_04040 PF00692 dUTPase GOD87_04045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GOD87_04045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GOD87_04045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GOD87_04045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GOD87_04050 PF00696 Amino acid kinase family GOD87_04060 PF13230 Glutamine amidotransferases class-II GOD87_04065 PF01814 Hemerythrin HHE cation binding domain GOD87_04075 PF03658 RnfH family Ubiquitin GOD87_04080 PF04355 SmpA / OmlA family GOD87_04085 PF01475 Ferric uptake regulator family GOD87_04090 PF00437 Type II/IV secretion system protein GOD87_04095 PF00437 Type II/IV secretion system protein GOD87_04100 PF01168 Alanine racemase, N-terminal domain GOD87_04110 PF12320 Type 5 capsule protein repressor C-terminal domain GOD87_04110 PF00149 Calcineurin-like phosphoesterase GOD87_04130 PF08338 Domain of unknown function (DUF1731) GOD87_04130 PF01370 NAD dependent epimerase/dehydratase family GOD87_04135 PF01266 FAD dependent oxidoreductase GOD87_04140 PF00490 Delta-aminolevulinic acid dehydratase GOD87_04145 PF03061 Thioesterase superfamily GOD87_04150 PF13533 Biotin-lipoyl like GOD87_04155 PF07690 Major Facilitator Superfamily GOD87_04170 PF01867 CRISPR associated protein Cas1 GOD87_04180 PF09615 CRISPR-associated protein (Cas_Csy3) GOD87_04200 PF18019 HD domain GOD87_04205 PF13737 Transposase DDE domain GOD87_04215 PF13520 Amino acid permease GOD87_04220 PF02574 Homocysteine S-methyltransferase GOD87_04230 PF06039 Malate:quinone oxidoreductase (Mqo) GOD87_04235 PF00732 GMC oxidoreductase GOD87_04235 PF05199 GMC oxidoreductase GOD87_04240 PF00171 Aldehyde dehydrogenase family GOD87_04245 PF13977 BetI-type transcriptional repressor, C-terminal GOD87_04245 PF00440 Bacterial regulatory proteins, tetR family GOD87_04250 PF02028 BCCT, betaine/carnitine/choline family transporter GOD87_04255 PF02028 BCCT, betaine/carnitine/choline family transporter GOD87_04265 PF03061 Thioesterase superfamily GOD87_04275 PF02492 CobW/HypB/UreG, nucleotide-binding domain GOD87_04275 PF07683 Cobalamin synthesis protein cobW C-terminal domain GOD87_04280 PF00375 Sodium:dicarboxylate symporter family GOD87_04285 PF07152 YaeQ protein GOD87_04290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOD87_04295 PF01522 Polysaccharide deacetylase GOD87_04295 PF14883 Hypothetical glycosyl hydrolase family 13 GOD87_04300 PF00535 Glycosyl transferase family 2 GOD87_04310 PF00378 Enoyl-CoA hydratase/isomerase GOD87_04325 PF09339 IclR helix-turn-helix domain GOD87_04325 PF01614 Bacterial transcriptional regulator GOD87_04330 PF00355 Rieske [2Fe-2S] domain GOD87_04340 PF00355 Rieske [2Fe-2S] domain GOD87_04350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOD87_04355 PF14759 Reductase C-terminal GOD87_04355 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_04360 PF07690 Major Facilitator Superfamily GOD87_04370 PF12697 Alpha/beta hydrolase family GOD87_04380 PF01958 Domain of unknown function DUF108 GOD87_04380 PF03447 Homoserine dehydrogenase, NAD binding domain GOD87_04385 PF00171 Aldehyde dehydrogenase family GOD87_04390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOD87_04390 PF00205 Thiamine pyrophosphate enzyme, central domain GOD87_04390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOD87_04400 PF07690 Major Facilitator Superfamily GOD87_04405 PF01327 Polypeptide deformylase GOD87_04410 PF04960 Glutaminase GOD87_04415 PF12833 Helix-turn-helix domain GOD87_04415 PF02311 AraC-like ligand binding domain GOD87_04420 PF07690 Major Facilitator Superfamily GOD87_04425 PF01263 Aldose 1-epimerase GOD87_04435 PF03466 LysR substrate binding domain GOD87_04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_04445 PF07690 Major Facilitator Superfamily GOD87_04450 PF00456 Transketolase, thiamine diphosphate binding domain GOD87_04455 PF02780 Transketolase, C-terminal domain GOD87_04455 PF02779 Transketolase, pyrimidine binding domain GOD87_04460 PF02574 Homocysteine S-methyltransferase GOD87_04460 PF00809 Pterin binding enzyme GOD87_04460 PF02310 B12 binding domain GOD87_04460 PF02965 Vitamin B12 dependent methionine synthase, activation domain GOD87_04460 PF02607 B12 binding domain GOD87_04465 PF01384 Phosphate transporter family GOD87_04470 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_04485 PF03781 Sulfatase-modifying factor enzyme 1 GOD87_04490 PF00884 Sulfatase GOD87_04500 PF01106 NifU-like domain GOD87_04500 PF01521 Iron-sulphur cluster biosynthesis GOD87_04505 PF07715 TonB-dependent Receptor Plug Domain GOD87_04505 PF00593 TonB dependent receptor GOD87_04515 PF00561 alpha/beta hydrolase fold GOD87_04520 PF00484 Carbonic anhydrase GOD87_04525 PF13472 GDSL-like Lipase/Acylhydrolase family GOD87_04530 PF00005 ABC transporter GOD87_04540 PF01694 Rhomboid family GOD87_04545 PF00912 Transglycosylase GOD87_04550 PF13090 Polyphosphate kinase C-terminal domain 2 GOD87_04550 PF17941 Polyphosphate kinase C-terminal domain 1 GOD87_04550 PF02503 Polyphosphate kinase middle domain GOD87_04550 PF13089 Polyphosphate kinase N-terminal domain GOD87_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_04565 PF03466 LysR substrate binding domain GOD87_04570 PF00561 alpha/beta hydrolase fold GOD87_04575 PF18113 Rubredoxin binding C-terminal domain GOD87_04575 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_04580 PF00301 Rubredoxin GOD87_04595 PF00152 tRNA synthetases class II (D, K and N) GOD87_04595 PF01336 OB-fold nucleic acid binding domain GOD87_04600 PF14052 Capsule assembly protein Wzi GOD87_04610 PF01507 Phosphoadenosine phosphosulfate reductase family GOD87_04615 PF00009 Elongation factor Tu GTP binding domain GOD87_04630 PF03600 Citrate transporter GOD87_04635 PF01595 Cyclin M transmembrane N-terminal domain GOD87_04635 PF03471 Transporter associated domain GOD87_04635 PF00571 CBS domain GOD87_04640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_04640 PF03466 LysR substrate binding domain GOD87_04645 PF00463 Isocitrate lyase family GOD87_04660 PF01774 UreD urease accessory protein GOD87_04665 PF00547 Urease, gamma subunit GOD87_04670 PF00699 Urease beta subunit GOD87_04675 PF01979 Amidohydrolase family GOD87_04675 PF00449 Urease alpha-subunit, N-terminal domain GOD87_04680 PF02814 UreE urease accessory protein, N-terminal domain GOD87_04680 PF05194 UreE urease accessory protein, C-terminal domain GOD87_04685 PF01730 UreF GOD87_04690 PF02492 CobW/HypB/UreG, nucleotide-binding domain GOD87_04705 PF03717 Penicillin-binding Protein dimerisation domain GOD87_04705 PF00905 Penicillin binding protein transpeptidase domain GOD87_04720 PF05191 Adenylate kinase, active site lid GOD87_04730 PF10576 Iron-sulfur binding domain of endonuclease III GOD87_04730 PF00633 Helix-hairpin-helix motif GOD87_04730 PF00730 HhH-GPD superfamily base excision DNA repair protein GOD87_04735 PF04060 Putative Fe-S cluster GOD87_04740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GOD87_04740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GOD87_04750 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GOD87_04755 PF02590 Predicted SPOUT methyltransferase GOD87_04760 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_04760 PF02190 ATP-dependent protease La (LON) substrate-binding domain GOD87_04760 PF05362 Lon protease (S16) C-terminal proteolytic domain GOD87_04765 PF05662 Coiled stalk of trimeric autotransporter adhesin GOD87_04765 PF05658 Head domain of trimeric autotransporter adhesin GOD87_04765 PF13018 Extended Signal Peptide of Type V secretion system GOD87_04765 PF03895 YadA-like membrane anchor domain GOD87_04775 PF01812 5-formyltetrahydrofolate cyclo-ligase family GOD87_04815 PF05195 Aminopeptidase P, N-terminal domain GOD87_04815 PF00557 Metallopeptidase family M24 GOD87_04820 PF01494 FAD binding domain GOD87_04825 PF01494 FAD binding domain GOD87_04835 PF13411 MerR HTH family regulatory protein GOD87_04845 PF01810 LysE type translocator GOD87_04850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_04850 PF03466 LysR substrate binding domain GOD87_04860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GOD87_04865 PF02021 Uncharacterised protein family UPF0102 GOD87_04870 PF04972 BON domain GOD87_04880 PF09297 NADH pyrophosphatase zinc ribbon domain GOD87_04880 PF00293 NUDIX domain GOD87_04890 PF00929 Exonuclease GOD87_04895 PF01464 Transglycosylase SLT domain GOD87_04895 PF01476 LysM domain GOD87_04895 PF01464 Transglycosylase SLT domain GOD87_04895 PF01476 LysM domain GOD87_04900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOD87_04905 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_04910 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_04910 PF12911 N-terminal TM domain of oligopeptide transport permease C GOD87_04915 PF00005 ABC transporter GOD87_04915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOD87_04920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_04925 PF07715 TonB-dependent Receptor Plug Domain GOD87_04925 PF00593 TonB dependent receptor GOD87_04935 PF00929 Exonuclease GOD87_04940 PF01979 Amidohydrolase family GOD87_04945 PF00563 EAL domain GOD87_04945 PF01590 GAF domain GOD87_04945 PF00990 Diguanylate cyclase, GGDEF domain GOD87_04945 PF00360 Phytochrome region GOD87_04950 PF00764 Arginosuccinate synthase GOD87_04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_04955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_04965 PF00589 Phage integrase family GOD87_04965 PF13356 Arm DNA-binding domain GOD87_05045 PF00529 HlyD membrane-fusion protein of T1SS GOD87_05045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_05050 PF00873 AcrB/AcrD/AcrF family GOD87_05070 PF07690 Major Facilitator Superfamily GOD87_05085 PF01545 Cation efflux family GOD87_05085 PF16916 Dimerisation domain of Zinc Transporter GOD87_05095 PF00753 Metallo-beta-lactamase superfamily GOD87_05095 PF14864 Alkyl sulfatase C-terminal GOD87_05095 PF14863 Alkyl sulfatase dimerisation GOD87_05105 PF02417 Chromate transporter GOD87_05110 PF09828 Chromate resistance exported protein GOD87_05130 PF05987 Bacterial protein of unknown function (DUF898) GOD87_05135 PF03180 NLPA lipoprotein GOD87_05150 PF03783 Curli production assembly/transport component CsgG GOD87_05160 PF05643 Putative bacterial lipoprotein (DUF799) GOD87_05170 PF00324 Amino acid permease GOD87_05175 PF01266 FAD dependent oxidoreductase GOD87_05180 PF00324 Amino acid permease GOD87_05190 PF07729 FCD domain GOD87_05190 PF00392 Bacterial regulatory proteins, gntR family GOD87_05200 PF00171 Aldehyde dehydrogenase family GOD87_05210 PF00202 Aminotransferase class-III GOD87_05215 PF04958 Arginine N-succinyltransferase beta subunit GOD87_05220 PF00324 Amino acid permease GOD87_05235 PF00171 Aldehyde dehydrogenase family GOD87_05240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOD87_05240 PF12833 Helix-turn-helix domain GOD87_05245 PF00892 EamA-like transporter family GOD87_05250 PF08666 SAF domain GOD87_05250 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GOD87_05255 PF07690 Major Facilitator Superfamily GOD87_05260 PF13378 Enolase C-terminal domain-like GOD87_05265 PF00701 Dihydrodipicolinate synthetase family GOD87_05270 PF00171 Aldehyde dehydrogenase family GOD87_05275 PF00392 Bacterial regulatory proteins, gntR family GOD87_05275 PF07729 FCD domain GOD87_05280 PF07519 Tannase and feruloyl esterase GOD87_05300 PF13340 Putative transposase of IS4/5 family (DUF4096) GOD87_05310 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_05310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_05310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_05320 PF00171 Aldehyde dehydrogenase family GOD87_05325 PF00378 Enoyl-CoA hydratase/isomerase GOD87_05330 PF07690 Major Facilitator Superfamily GOD87_05345 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_05345 PF00175 Oxidoreductase NAD-binding domain GOD87_05350 PF00355 Rieske [2Fe-2S] domain GOD87_05360 PF03781 Sulfatase-modifying factor enzyme 1 GOD87_05365 PF00884 Sulfatase GOD87_05370 PF07690 Major Facilitator Superfamily GOD87_05375 PF03573 outer membrane porin, OprD family GOD87_05380 PF05199 GMC oxidoreductase GOD87_05385 PF07859 alpha/beta hydrolase fold GOD87_05390 PF00106 short chain dehydrogenase GOD87_05395 PF00743 Flavin-binding monooxygenase-like GOD87_05400 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOD87_05400 PF12833 Helix-turn-helix domain GOD87_05405 PF04072 Leucine carboxyl methyltransferase GOD87_05410 PF00743 Flavin-binding monooxygenase-like GOD87_05415 PF00106 short chain dehydrogenase GOD87_05425 PF17932 Tetracyclin repressor-like, C-terminal domain GOD87_05425 PF00440 Bacterial regulatory proteins, tetR family GOD87_05430 PF17954 Quercetinase C-terminal cupin domain GOD87_05430 PF02678 Pirin GOD87_05440 PF00106 short chain dehydrogenase GOD87_05445 PF00743 Flavin-binding monooxygenase-like GOD87_05455 PF00860 Permease family GOD87_05460 PF00962 Adenosine/AMP deaminase GOD87_05465 PF01292 Prokaryotic cytochrome b561 GOD87_05475 PF01351 Ribonuclease HII GOD87_05480 PF02599 Global regulator protein family GOD87_05485 PF00696 Amino acid kinase family GOD87_05485 PF13840 ACT domain GOD87_05485 PF01842 ACT domain GOD87_05575 PF01695 IstB-like ATP binding protein GOD87_05775 PF01551 Peptidase family M23 GOD87_05775 PF10145 Phage-related minor tail protein GOD87_05775 PF01464 Transglycosylase SLT domain GOD87_05825 PF08019 Phosphoethanolamine transferase EptA/EptB GOD87_05825 PF00884 Sulfatase GOD87_05830 PF00589 Phage integrase family GOD87_05830 PF13356 Arm DNA-binding domain GOD87_05835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GOD87_05835 PF01411 tRNA synthetases class II (A) GOD87_05835 PF02272 DHHA1 domain GOD87_05840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GOD87_05840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GOD87_05845 PF13393 Histidyl-tRNA synthetase GOD87_05850 PF00709 Adenylosuccinate synthetase GOD87_05865 PF00248 Aldo/keto reductase family GOD87_05870 PF00027 Cyclic nucleotide-binding domain GOD87_05870 PF13545 Crp-like helix-turn-helix domain GOD87_05875 PF02566 OsmC-like protein GOD87_05890 PF02861 Clp amino terminal domain, pathogenicity island component GOD87_05890 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_05890 PF10431 C-terminal, D2-small domain, of ClpB protein GOD87_05890 PF07724 AAA domain (Cdc48 subfamily) GOD87_05890 PF17871 AAA lid domain GOD87_05905 PF10672 S-adenosylmethionine-dependent methyltransferase GOD87_05905 PF02926 THUMP domain GOD87_05905 PF01170 Putative RNA methylase family UPF0020 GOD87_05915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GOD87_05915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GOD87_05920 PF01979 Amidohydrolase family GOD87_05925 PF13488 Glycine zipper GOD87_05925 PF00691 OmpA family GOD87_05935 PF00043 Glutathione S-transferase, C-terminal domain GOD87_05935 PF13417 Glutathione S-transferase, N-terminal domain GOD87_05940 PF02390 Putative methyltransferase GOD87_05950 PF00043 Glutathione S-transferase, C-terminal domain GOD87_05950 PF02798 Glutathione S-transferase, N-terminal domain GOD87_05960 PF13192 Thioredoxin domain GOD87_05960 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_05980 PF10417 C-terminal domain of 1-Cys peroxiredoxin GOD87_05980 PF00578 AhpC/TSA family GOD87_05985 PF00270 DEAD/DEAH box helicase GOD87_05985 PF11898 Domain of unknown function (DUF3418) GOD87_05985 PF04408 Helicase associated domain (HA2) GOD87_05985 PF00271 Helicase conserved C-terminal domain GOD87_05985 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GOD87_05990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GOD87_05990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GOD87_06000 PF07690 Major Facilitator Superfamily GOD87_06005 PF03594 Benzoate membrane transport protein GOD87_06010 PF00106 short chain dehydrogenase GOD87_06015 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_06015 PF00970 Oxidoreductase FAD-binding domain GOD87_06015 PF00175 Oxidoreductase NAD-binding domain GOD87_06020 PF00866 Ring hydroxylating beta subunit GOD87_06025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOD87_06025 PF00355 Rieske [2Fe-2S] domain GOD87_06030 PF03466 LysR substrate binding domain GOD87_06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_06040 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_06040 PF00175 Oxidoreductase NAD-binding domain GOD87_06040 PF00970 Oxidoreductase FAD-binding domain GOD87_06050 PF02332 Methane/Phenol/Toluene Hydroxylase GOD87_06050 PF04945 YHS domain GOD87_06055 PF02406 MmoB/DmpM family GOD87_06060 PF02332 Methane/Phenol/Toluene Hydroxylase GOD87_06065 PF06099 Phenol hydroxylase subunit GOD87_06070 PF00158 Sigma-54 interaction domain GOD87_06070 PF02830 V4R domain GOD87_06070 PF06505 Activator of aromatic catabolism GOD87_06070 PF02954 Bacterial regulatory protein, Fis family GOD87_06075 PF00403 Heavy-metal-associated domain GOD87_06080 PF00403 Heavy-metal-associated domain GOD87_06085 PF09278 MerR, DNA binding GOD87_06085 PF00376 MerR family regulatory protein GOD87_06120 PF02601 Exonuclease VII, large subunit GOD87_06120 PF13742 OB-fold nucleic acid binding domain GOD87_06150 PF01810 LysE type translocator GOD87_06155 PF00313 'Cold-shock' DNA-binding domain GOD87_06165 PF14748 Pyrroline-5-carboxylate reductase dimerisation GOD87_06165 PF03807 NADP oxidoreductase coenzyme F420-dependent GOD87_06190 PF07690 Major Facilitator Superfamily GOD87_06195 PF01638 HxlR-like helix-turn-helix GOD87_06225 PF01406 tRNA synthetases class I (C) catalytic domain GOD87_06225 PF09190 DALR domain GOD87_06230 PF01380 SIS domain GOD87_06230 PF00571 CBS domain GOD87_06245 PF03968 OstA-like protein GOD87_06250 PF00005 ABC transporter GOD87_06250 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOD87_06260 PF02321 Outer membrane efflux protein GOD87_06265 PF03412 Peptidase C39 family GOD87_06265 PF00005 ABC transporter GOD87_06265 PF00664 ABC transporter transmembrane region GOD87_06275 PF01205 Uncharacterized protein family UPF0029 GOD87_06280 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_06290 PF01596 O-methyltransferase GOD87_06300 PF11953 Domain of unknown function (DUF3470) GOD87_06300 PF00037 4Fe-4S binding domain GOD87_06310 PF05188 MutS domain II GOD87_06310 PF05192 MutS domain III GOD87_06310 PF05190 MutS family domain IV GOD87_06310 PF00488 MutS domain V GOD87_06310 PF01624 MutS domain I GOD87_06315 PF01037 Lrp/AsnC ligand binding domain GOD87_06320 PF00892 EamA-like transporter family GOD87_06325 PF03707 Bacterial signalling protein N terminal repeat GOD87_06325 PF00563 EAL domain GOD87_06325 PF00990 Diguanylate cyclase, GGDEF domain GOD87_06330 PF03279 Bacterial lipid A biosynthesis acyltransferase GOD87_06335 PF01544 CorA-like Mg2+ transporter protein GOD87_06350 PF07690 Major Facilitator Superfamily GOD87_06355 PF01177 Asp/Glu/Hydantoin racemase GOD87_06360 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_06365 PF00005 ABC transporter GOD87_06370 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_06375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GOD87_06395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOD87_06395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOD87_06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_06425 PF03466 LysR substrate binding domain GOD87_06430 PF01566 Natural resistance-associated macrophage protein GOD87_06435 PF03746 LamB/YcsF family GOD87_06440 PF07286 Protein of unknown function (DUF1445) GOD87_06450 PF00364 Biotin-requiring enzyme GOD87_06450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOD87_06450 PF02785 Biotin carboxylase C-terminal domain GOD87_06450 PF00289 Biotin carboxylase, N-terminal domain GOD87_06455 PF00654 Voltage gated chloride channel GOD87_06465 PF00440 Bacterial regulatory proteins, tetR family GOD87_06475 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_06475 PF13823 Alcohol dehydrogenase GroES-associated GOD87_06475 PF00107 Zinc-binding dehydrogenase GOD87_06490 PF02785 Biotin carboxylase C-terminal domain GOD87_06490 PF00289 Biotin carboxylase, N-terminal domain GOD87_06490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOD87_06495 PF02525 Flavodoxin-like fold GOD87_06500 PF01638 HxlR-like helix-turn-helix GOD87_06515 PF08753 NikR C terminal nickel binding domain GOD87_06515 PF01402 Ribbon-helix-helix protein, copG family GOD87_06520 PF01425 Amidase GOD87_06525 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOD87_06530 PF00005 ABC transporter GOD87_06595 PF02677 Epoxyqueuosine reductase QueH GOD87_06605 PF00376 MerR family regulatory protein GOD87_06605 PF09278 MerR, DNA binding GOD87_06615 PF00701 Dihydrodipicolinate synthetase family GOD87_06625 PF00392 Bacterial regulatory proteins, gntR family GOD87_06630 PF05544 Proline racemase GOD87_06635 PF01266 FAD dependent oxidoreductase GOD87_06645 PF04324 BFD-like [2Fe-2S] binding domain GOD87_06645 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_06655 PF00083 Sugar (and other) transporter GOD87_06660 PF00171 Aldehyde dehydrogenase family GOD87_06665 PF13520 Amino acid permease GOD87_06670 PF03315 Serine dehydratase beta chain GOD87_06670 PF03313 Serine dehydratase alpha chain GOD87_06675 PF01575 MaoC like domain GOD87_06675 PF00171 Aldehyde dehydrogenase family GOD87_06680 PF05138 Phenylacetic acid catabolic protein GOD87_06685 PF06243 Phenylacetic acid degradation B GOD87_06690 PF05138 Phenylacetic acid catabolic protein GOD87_06695 PF01883 Iron-sulfur cluster assembly protein GOD87_06700 PF00175 Oxidoreductase NAD-binding domain GOD87_06700 PF00970 Oxidoreductase FAD-binding domain GOD87_06700 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_06705 PF00378 Enoyl-CoA hydratase/isomerase GOD87_06710 PF00378 Enoyl-CoA hydratase/isomerase GOD87_06715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOD87_06715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOD87_06715 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GOD87_06720 PF00108 Thiolase, N-terminal domain GOD87_06720 PF02803 Thiolase, C-terminal domain GOD87_06725 PF00501 AMP-binding enzyme GOD87_06725 PF14535 AMP-binding enzyme C-terminal domain GOD87_06730 PF07848 PaaX-like protein GOD87_06730 PF08223 PaaX-like protein C-terminal domain GOD87_06735 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_06740 PF03061 Thioesterase superfamily GOD87_06750 PF12344 Ultra-violet resistance protein B GOD87_06750 PF02151 UvrB/uvrC motif GOD87_06750 PF04851 Type III restriction enzyme, res subunit GOD87_06750 PF00271 Helicase conserved C-terminal domain GOD87_06750 PF17757 UvrB interaction domain GOD87_06760 PF01638 HxlR-like helix-turn-helix GOD87_06765 PF00199 Catalase GOD87_06770 PF01292 Prokaryotic cytochrome b561 GOD87_06790 PF12697 Alpha/beta hydrolase family GOD87_06795 PF01613 Flavin reductase like domain GOD87_06800 PF00296 Luciferase-like monooxygenase GOD87_06805 PF00171 Aldehyde dehydrogenase family GOD87_06815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GOD87_06825 PF00171 Aldehyde dehydrogenase family GOD87_06830 PF02627 Carboxymuconolactone decarboxylase family GOD87_06835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_06835 PF03466 LysR substrate binding domain GOD87_06840 PF02525 Flavodoxin-like fold GOD87_06845 PF09339 IclR helix-turn-helix domain GOD87_06845 PF01614 Bacterial transcriptional regulator GOD87_06850 PF01494 FAD binding domain GOD87_06855 PF00392 Bacterial regulatory proteins, gntR family GOD87_06855 PF07702 UTRA domain GOD87_06865 PF08402 TOBE domain GOD87_06865 PF00005 ABC transporter GOD87_06870 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_06875 PF01266 FAD dependent oxidoreductase GOD87_06880 PF00266 Aminotransferase class-V GOD87_06885 PF13419 Haloacid dehalogenase-like hydrolase GOD87_06890 PF07690 Major Facilitator Superfamily GOD87_06895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_06895 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_06895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_06900 PF02515 CoA-transferase family III GOD87_06905 PF09339 IclR helix-turn-helix domain GOD87_06910 PF00378 Enoyl-CoA hydratase/isomerase GOD87_06915 PF03060 Nitronate monooxygenase GOD87_06925 PF07690 Major Facilitator Superfamily GOD87_06930 PF09339 IclR helix-turn-helix domain GOD87_06935 PF02803 Thiolase, C-terminal domain GOD87_06935 PF00108 Thiolase, N-terminal domain GOD87_06940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOD87_06940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOD87_06940 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GOD87_06950 PF00378 Enoyl-CoA hydratase/isomerase GOD87_06955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_06955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_06955 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_06960 PF07690 Major Facilitator Superfamily GOD87_06965 PF01144 Coenzyme A transferase GOD87_06970 PF01144 Coenzyme A transferase GOD87_06980 PF07690 Major Facilitator Superfamily GOD87_07005 PF03466 LysR substrate binding domain GOD87_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07010 PF00682 HMGL-like GOD87_07015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOD87_07015 PF00364 Biotin-requiring enzyme GOD87_07015 PF00289 Biotin carboxylase, N-terminal domain GOD87_07015 PF02785 Biotin carboxylase C-terminal domain GOD87_07020 PF00378 Enoyl-CoA hydratase/isomerase GOD87_07025 PF01039 Carboxyl transferase domain GOD87_07030 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_07030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_07030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_07035 PF00440 Bacterial regulatory proteins, tetR family GOD87_07040 PF00501 AMP-binding enzyme GOD87_07040 PF13193 AMP-binding enzyme C-terminal domain GOD87_07060 PF03466 LysR substrate binding domain GOD87_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07090 PF02464 Competence-damaged protein GOD87_07090 PF18146 Damage-inducible protein CinA KH domain GOD87_07090 PF00994 Probable molybdopterin binding domain GOD87_07100 PF06628 Catalase-related immune-responsive GOD87_07100 PF00199 Catalase GOD87_07100 PF18011 C-terminal domain found in long catalases GOD87_07125 PF00717 Peptidase S24-like GOD87_07135 PF13404 AsnC-type helix-turn-helix domain GOD87_07135 PF01037 Lrp/AsnC ligand binding domain GOD87_07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_07145 PF00072 Response regulator receiver domain GOD87_07145 PF00512 His Kinase A (phospho-acceptor) domain GOD87_07145 PF09308 LuxQ, periplasmic GOD87_07150 PF00072 Response regulator receiver domain GOD87_07165 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_07170 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_07175 PF00005 ABC transporter GOD87_07180 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOD87_07185 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOD87_07195 PF03466 LysR substrate binding domain GOD87_07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07200 PF01810 LysE type translocator GOD87_07205 PF00266 Aminotransferase class-V GOD87_07215 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_07220 PF00581 Rhodanese-like domain GOD87_07230 PF03466 LysR substrate binding domain GOD87_07230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07235 PF02798 Glutathione S-transferase, N-terminal domain GOD87_07240 PF02798 Glutathione S-transferase, N-terminal domain GOD87_07240 PF14834 Glutathione S-transferase, C-terminal domain GOD87_07245 PF03466 LysR substrate binding domain GOD87_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07250 PF03788 LrgA family GOD87_07255 PF04172 LrgB-like family GOD87_07260 PF00155 Aminotransferase class I and II GOD87_07260 PF00392 Bacterial regulatory proteins, gntR family GOD87_07275 PF07690 Major Facilitator Superfamily GOD87_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07285 PF03466 LysR substrate binding domain GOD87_07290 PF16957 Malonate decarboxylase, alpha subunit, transporter GOD87_07295 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GOD87_07300 PF06857 Malonate decarboxylase delta subunit (MdcD) GOD87_07305 PF01039 Carboxyl transferase domain GOD87_07315 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG GOD87_07320 PF00698 Acyl transferase domain GOD87_07335 PF03466 LysR substrate binding domain GOD87_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07340 PF00155 Aminotransferase class I and II GOD87_07340 PF00392 Bacterial regulatory proteins, gntR family GOD87_07350 PF02322 Cytochrome bd terminal oxidase subunit II GOD87_07355 PF01654 Cytochrome bd terminal oxidase subunit I GOD87_07365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_07365 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_07365 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOD87_07370 PF00296 Luciferase-like monooxygenase GOD87_07375 PF00083 Sugar (and other) transporter GOD87_07385 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GOD87_07390 PF00005 ABC transporter GOD87_07395 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_07400 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GOD87_07405 PF01177 Asp/Glu/Hydantoin racemase GOD87_07410 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GOD87_07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07420 PF03466 LysR substrate binding domain GOD87_07430 PF13382 Adenine deaminase C-terminal domain GOD87_07430 PF01979 Amidohydrolase family GOD87_07440 PF03960 ArsC family GOD87_07445 PF01022 Bacterial regulatory protein, arsR family GOD87_07450 PF01758 Sodium Bile acid symporter family GOD87_07455 PF03466 LysR substrate binding domain GOD87_07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07470 PF13192 Thioredoxin domain GOD87_07470 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_07485 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_07490 PF00588 SpoU rRNA Methylase family GOD87_07495 PF14579 Helix-hairpin-helix motif GOD87_07495 PF07733 Bacterial DNA polymerase III alpha NTPase domain GOD87_07495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GOD87_07495 PF02811 PHP domain GOD87_07495 PF01336 OB-fold nucleic acid binding domain GOD87_07500 PF17763 Glutaminase/Asparaginase C-terminal domain GOD87_07500 PF00710 Asparaginase, N-terminal GOD87_07505 PF00375 Sodium:dicarboxylate symporter family GOD87_07510 PF00155 Aminotransferase class I and II GOD87_07515 PF01641 SelR domain GOD87_07520 PF00255 Glutathione peroxidase GOD87_07525 PF12852 Cupin GOD87_07525 PF12833 Helix-turn-helix domain GOD87_07535 PF00155 Aminotransferase class I and II GOD87_07540 PF08335 GlnD PII-uridylyltransferase GOD87_07540 PF01966 HD domain GOD87_07540 PF01909 Nucleotidyltransferase domain GOD87_07545 PF02222 ATP-grasp domain GOD87_07555 PF05437 Branched-chain amino acid transport protein (AzlD) GOD87_07560 PF03591 AzlC protein GOD87_07585 PF06071 Protein of unknown function (DUF933) GOD87_07585 PF01926 50S ribosome-binding GTPase GOD87_07590 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_07595 PF09383 NIL domain GOD87_07595 PF00005 ABC transporter GOD87_07600 PF03180 NLPA lipoprotein GOD87_07605 PF03180 NLPA lipoprotein GOD87_07610 PF00296 Luciferase-like monooxygenase GOD87_07620 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOD87_07620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_07635 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_07640 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_07645 PF00005 ABC transporter GOD87_07675 PF01709 Transcriptional regulator GOD87_07685 PF00440 Bacterial regulatory proteins, tetR family GOD87_07705 PF03466 LysR substrate binding domain GOD87_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_07715 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GOD87_07725 PF00892 EamA-like transporter family GOD87_07740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOD87_07740 PF12833 Helix-turn-helix domain GOD87_07750 PF00577 Outer membrane usher protein GOD87_07750 PF13954 PapC N-terminal domain GOD87_07750 PF13953 PapC C-terminal domain GOD87_07755 PF02753 Pili assembly chaperone PapD, C-terminal domain GOD87_07755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GOD87_07760 PF16970 Type-1 fimbrial protein, A GOD87_07775 PF06968 Biotin and Thiamin Synthesis associated domain GOD87_07775 PF04055 Radical SAM superfamily GOD87_07780 PF08331 Domain of unknown function (DUF1730) GOD87_07785 PF01256 Carbohydrate kinase GOD87_07785 PF03853 YjeF-related protein N-terminus GOD87_07790 PF02075 Crossover junction endodeoxyribonuclease RuvC GOD87_07805 PF00905 Penicillin binding protein transpeptidase domain GOD87_07825 PF00438 S-adenosylmethionine synthetase, N-terminal domain GOD87_07825 PF02772 S-adenosylmethionine synthetase, central domain GOD87_07825 PF02773 S-adenosylmethionine synthetase, C-terminal domain GOD87_07830 PF02779 Transketolase, pyrimidine binding domain GOD87_07830 PF00456 Transketolase, thiamine diphosphate binding domain GOD87_07830 PF02780 Transketolase, C-terminal domain GOD87_07840 PF04264 YceI-like domain GOD87_07850 PF09992 Phosphodiester glycosidase GOD87_07860 PF05958 tRNA (Uracil-5-)-methyltransferase GOD87_07865 PF04229 GrpB protein GOD87_07870 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GOD87_07870 PF14850 DNA-binding domain of Proline dehydrogenase GOD87_07870 PF01619 Proline dehydrogenase GOD87_07870 PF00171 Aldehyde dehydrogenase family GOD87_07875 PF01037 Lrp/AsnC ligand binding domain GOD87_07880 PF00474 Sodium:solute symporter family GOD87_07885 PF02146 Sir2 family GOD87_07890 PF01597 Glycine cleavage H-protein GOD87_07895 PF12833 Helix-turn-helix domain GOD87_07895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOD87_07905 PF00664 ABC transporter transmembrane region GOD87_07905 PF00005 ABC transporter GOD87_07910 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GOD87_07915 PF06912 Protein of unknown function (DUF1275) GOD87_07920 PF00375 Sodium:dicarboxylate symporter family GOD87_07935 PF08007 Cupin superfamily protein GOD87_07940 PF02545 Maf-like protein GOD87_07950 PF00162 Phosphoglycerate kinase GOD87_07960 PF01116 Fructose-bisphosphate aldolase class-II GOD87_07965 PF00639 PPIC-type PPIASE domain GOD87_07965 PF09312 SurA N-terminal domain GOD87_07970 PF03968 OstA-like protein GOD87_07970 PF04453 LPS transport system D GOD87_07975 PF01636 Phosphotransferase enzyme family GOD87_07980 PF00483 Nucleotidyl transferase GOD87_07985 PF02527 rRNA small subunit methyltransferase G GOD87_07990 PF13614 AAA domain GOD87_07995 PF17762 HTH domain found in ParB protein GOD87_07995 PF02195 ParB-like nuclease domain GOD87_08000 PF01618 MotA/TolQ/ExbB proton channel family GOD87_08010 PF00005 ABC transporter GOD87_08010 PF00664 ABC transporter transmembrane region GOD87_08015 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GOD87_08020 PF02348 Cytidylyltransferase GOD87_08025 PF09115 DNA polymerase III, delta subunit, C terminal GOD87_08035 PF01026 TatD related DNase GOD87_08050 PF02501 Type II secretion system (T2SS), protein I GOD87_08050 PF07963 Prokaryotic N-terminal methylation motif GOD87_08055 PF11612 Type II secretion system (T2SS), protein J GOD87_08055 PF07963 Prokaryotic N-terminal methylation motif GOD87_08060 PF03934 Type II secretion system (T2SS), protein K GOD87_08070 PF03167 Uracil DNA glycosylase superfamily GOD87_08080 PF14437 MafB19-like deaminase GOD87_08090 PF02224 Cytidylate kinase GOD87_08095 PF00575 S1 RNA binding domain GOD87_08100 PF00216 Bacterial DNA-binding protein GOD87_08110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GOD87_08120 PF00743 Flavin-binding monooxygenase-like GOD87_08130 PF03969 AFG1-like ATPase GOD87_08135 PF01274 Malate synthase GOD87_08145 PF02472 Biopolymer transport protein ExbD/TolR GOD87_08150 PF02472 Biopolymer transport protein ExbD/TolR GOD87_08155 PF01618 MotA/TolQ/ExbB proton channel family GOD87_08165 PF00593 TonB dependent receptor GOD87_08165 PF07715 TonB-dependent Receptor Plug Domain GOD87_08175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOD87_08185 PF01432 Peptidase family M3 GOD87_08190 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_08195 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_08200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOD87_08200 PF00005 ABC transporter GOD87_08215 PF00459 Inositol monophosphatase family GOD87_08225 PF01649 Ribosomal protein S20 GOD87_08230 PF13460 NAD(P)H-binding GOD87_08235 PF03737 Aldolase/RraA GOD87_08255 PF00271 Helicase conserved C-terminal domain GOD87_08255 PF03461 TRCF domain GOD87_08255 PF17757 UvrB interaction domain GOD87_08255 PF00270 DEAD/DEAH box helicase GOD87_08255 PF02559 CarD-like/TRCF domain GOD87_08265 PF00211 Adenylate and Guanylate cyclase catalytic domain GOD87_08270 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_08275 PF00012 Hsp70 protein GOD87_08280 PF07743 HSCB C-terminal oligomerisation domain GOD87_08280 PF00226 DnaJ domain GOD87_08285 PF01521 Iron-sulphur cluster biosynthesis GOD87_08290 PF01592 NifU-like N terminal domain GOD87_08295 PF00266 Aminotransferase class-V GOD87_08300 PF02082 Transcriptional regulator GOD87_08315 PF00216 Bacterial DNA-binding protein GOD87_08320 PF09312 SurA N-terminal domain GOD87_08320 PF00639 PPIC-type PPIASE domain GOD87_08325 PF12852 Cupin GOD87_08325 PF12833 Helix-turn-helix domain GOD87_08330 PF00487 Fatty acid desaturase GOD87_08335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_08335 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_08335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_08340 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_08340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_08340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_08345 PF03109 ABC1 family GOD87_08355 PF04073 Aminoacyl-tRNA editing domain GOD87_08360 PF04183 IucA / IucC family GOD87_08360 PF06276 Ferric iron reductase FhuF-like transporter GOD87_08365 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GOD87_08370 PF07690 Major Facilitator Superfamily GOD87_08375 PF04183 IucA / IucC family GOD87_08375 PF06276 Ferric iron reductase FhuF-like transporter GOD87_08380 PF04183 IucA / IucC family GOD87_08380 PF06276 Ferric iron reductase FhuF-like transporter GOD87_08390 PF03737 Aldolase/RraA GOD87_08395 PF07715 TonB-dependent Receptor Plug Domain GOD87_08395 PF00593 TonB dependent receptor GOD87_08430 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GOD87_08435 PF02277 Phosphoribosyltransferase GOD87_08440 PF00300 Histidine phosphatase superfamily (branch 1) GOD87_08450 PF02654 Cobalamin-5-phosphate synthase GOD87_08455 PF00793 DAHP synthetase I family GOD87_08460 PF01925 Sulfite exporter TauE/SafE GOD87_08480 PF07715 TonB-dependent Receptor Plug Domain GOD87_08480 PF00593 TonB dependent receptor GOD87_08485 PF02684 Lipid-A-disaccharide synthetase GOD87_08495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_08500 PF00005 ABC transporter GOD87_08535 PF01230 HIT domain GOD87_08565 PF08241 Methyltransferase domain GOD87_08570 PF00561 alpha/beta hydrolase fold GOD87_08575 PF01053 Cys/Met metabolism PLP-dependent enzyme GOD87_08585 PF02575 YbaB/EbfC DNA-binding family GOD87_08590 PF13662 Toprim domain GOD87_08590 PF02132 RecR protein GOD87_08595 PF00570 HRDC domain GOD87_08595 PF01612 3'-5' exonuclease GOD87_08615 PF05166 YcgL domain GOD87_08625 PF17862 AAA+ lid domain GOD87_08625 PF01434 Peptidase family M41 GOD87_08625 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_08635 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_08640 PF05175 Methyltransferase small domain GOD87_08645 PF01264 Chorismate synthase GOD87_08650 PF08448 PAS fold GOD87_08650 PF00990 Diguanylate cyclase, GGDEF domain GOD87_08665 PF04055 Radical SAM superfamily GOD87_08670 PF00676 Dehydrogenase E1 component GOD87_08675 PF02780 Transketolase, C-terminal domain GOD87_08675 PF02779 Transketolase, pyrimidine binding domain GOD87_08680 PF00364 Biotin-requiring enzyme GOD87_08680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GOD87_08680 PF02817 e3 binding domain GOD87_08685 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_08685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOD87_08690 PF00106 short chain dehydrogenase GOD87_08695 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_08695 PF00107 Zinc-binding dehydrogenase GOD87_08700 PF01062 Bestrophin, RFP-TM, chloride channel GOD87_08705 PF00072 Response regulator receiver domain GOD87_08705 PF02954 Bacterial regulatory protein, Fis family GOD87_08705 PF00158 Sigma-54 interaction domain GOD87_08710 PF04273 Putative phosphatase (DUF442) GOD87_08710 PF00753 Metallo-beta-lactamase superfamily GOD87_08715 PF04273 Putative phosphatase (DUF442) GOD87_08715 PF00753 Metallo-beta-lactamase superfamily GOD87_08720 PF01925 Sulfite exporter TauE/SafE GOD87_08735 PF12833 Helix-turn-helix domain GOD87_08735 PF06445 GyrI-like small molecule binding domain GOD87_08740 PF01638 HxlR-like helix-turn-helix GOD87_08745 PF02525 Flavodoxin-like fold GOD87_08770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GOD87_08775 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_08780 PF00005 ABC transporter GOD87_08795 PF00083 Sugar (and other) transporter GOD87_08800 PF07715 TonB-dependent Receptor Plug Domain GOD87_08800 PF00593 TonB dependent receptor GOD87_08805 PF00206 Lyase GOD87_08805 PF10415 Fumarase C C-terminus GOD87_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_08820 PF03466 LysR substrate binding domain GOD87_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_08825 PF03466 LysR substrate binding domain GOD87_08830 PF02803 Thiolase, C-terminal domain GOD87_08830 PF00108 Thiolase, N-terminal domain GOD87_08835 PF02667 Short chain fatty acid transporter GOD87_08840 PF01144 Coenzyme A transferase GOD87_08845 PF01144 Coenzyme A transferase GOD87_08850 PF03466 LysR substrate binding domain GOD87_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_08870 PF00440 Bacterial regulatory proteins, tetR family GOD87_08890 PF06719 AraC-type transcriptional regulator N-terminus GOD87_08890 PF12833 Helix-turn-helix domain GOD87_08895 PF07690 Major Facilitator Superfamily GOD87_08900 PF01738 Dienelactone hydrolase family GOD87_08915 PF01613 Flavin reductase like domain GOD87_08925 PF14525 AraC-binding-like domain GOD87_08925 PF12833 Helix-turn-helix domain GOD87_08930 PF00970 Oxidoreductase FAD-binding domain GOD87_08930 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_08930 PF00175 Oxidoreductase NAD-binding domain GOD87_08935 PF00866 Ring hydroxylating beta subunit GOD87_08940 PF00355 Rieske [2Fe-2S] domain GOD87_08940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOD87_08945 PF03459 TOBE domain GOD87_08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_08955 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_08960 PF03459 TOBE domain GOD87_08960 PF00005 ABC transporter GOD87_08965 PF00106 short chain dehydrogenase GOD87_08970 PF00857 Isochorismatase family GOD87_08970 PF00550 Phosphopantetheine attachment site GOD87_08980 PF00149 Calcineurin-like phosphoesterase GOD87_08985 PF13089 Polyphosphate kinase N-terminal domain GOD87_08985 PF17941 Polyphosphate kinase C-terminal domain 1 GOD87_08985 PF13090 Polyphosphate kinase C-terminal domain 2 GOD87_08985 PF02503 Polyphosphate kinase middle domain GOD87_08990 PF08042 PqqA family GOD87_08995 PF12706 Beta-lactamase superfamily domain GOD87_09000 PF03070 TENA/THI-4/PQQC family GOD87_09005 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GOD87_09010 PF13186 Iron-sulfur cluster-binding domain GOD87_09010 PF04055 Radical SAM superfamily GOD87_09015 PF01244 Membrane dipeptidase (Peptidase family M19) GOD87_09035 PF13091 PLD-like domain GOD87_09050 PF00199 Catalase GOD87_09060 PF00107 Zinc-binding dehydrogenase GOD87_09060 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_09075 PF13953 PapC C-terminal domain GOD87_09075 PF13954 PapC N-terminal domain GOD87_09075 PF00577 Outer membrane usher protein GOD87_09080 PF02753 Pili assembly chaperone PapD, C-terminal domain GOD87_09080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GOD87_09085 PF16970 Type-1 fimbrial protein, A GOD87_09095 PF17755 UvrA DNA-binding domain GOD87_09095 PF17760 UvrA interaction domain GOD87_09095 PF00005 ABC transporter GOD87_09100 PF00873 AcrB/AcrD/AcrF family GOD87_09105 PF00529 HlyD membrane-fusion protein of T1SS GOD87_09105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_09110 PF00486 Transcriptional regulatory protein, C terminal GOD87_09110 PF00072 Response regulator receiver domain GOD87_09115 PF16527 Two-component sensor protein CpxA, periplasmic domain GOD87_09115 PF00672 HAMP domain GOD87_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_09115 PF00512 His Kinase A (phospho-acceptor) domain GOD87_09125 PF02311 AraC-like ligand binding domain GOD87_09125 PF12833 Helix-turn-helix domain GOD87_09130 PF12146 Serine aminopeptidase, S33 GOD87_09145 PF02515 CoA-transferase family III GOD87_09150 PF00682 HMGL-like GOD87_09155 PF03600 Citrate transporter GOD87_09160 PF01614 Bacterial transcriptional regulator GOD87_09160 PF09339 IclR helix-turn-helix domain GOD87_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_09165 PF03466 LysR substrate binding domain GOD87_09170 PF03573 outer membrane porin, OprD family GOD87_09175 PF07690 Major Facilitator Superfamily GOD87_09175 PF00083 Sugar (and other) transporter GOD87_09205 PF02689 Helicase GOD87_09205 PF05970 PIF1-like helicase GOD87_09225 PF02824 TGS domain GOD87_09225 PF13291 ACT domain GOD87_09225 PF04607 Region found in RelA / SpoT proteins GOD87_09235 PF01975 Survival protein SurE GOD87_09260 PF07690 Major Facilitator Superfamily GOD87_09265 PF13533 Biotin-lipoyl like GOD87_09280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GOD87_09285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GOD87_09285 PF14572 Phosphoribosyl synthetase-associated domain GOD87_09305 PF00005 ABC transporter GOD87_09320 PF00107 Zinc-binding dehydrogenase GOD87_09320 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_09325 PF06719 AraC-type transcriptional regulator N-terminus GOD87_09325 PF12833 Helix-turn-helix domain GOD87_09330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOD87_09330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOD87_09335 PF07690 Major Facilitator Superfamily GOD87_09340 PF01370 NAD dependent epimerase/dehydratase family GOD87_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_09345 PF03466 LysR substrate binding domain GOD87_09355 PF00920 Dehydratase family GOD87_09360 PF00171 Aldehyde dehydrogenase family GOD87_09375 PF00529 HlyD membrane-fusion protein of T1SS GOD87_09375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_09400 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GOD87_09400 PF17287 POTRA domain GOD87_09400 PF08479 POTRA domain, ShlB-type GOD87_09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_09420 PF03466 LysR substrate binding domain GOD87_09430 PF08450 SMP-30/Gluconolactonase/LRE-like region GOD87_09445 PF04909 Amidohydrolase GOD87_09450 PF07690 Major Facilitator Superfamily GOD87_09480 PF13193 AMP-binding enzyme C-terminal domain GOD87_09480 PF00501 AMP-binding enzyme GOD87_09490 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_09490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_09490 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOD87_09490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_09495 PF01575 MaoC like domain GOD87_09500 PF00106 short chain dehydrogenase GOD87_09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_09515 PF03466 LysR substrate binding domain GOD87_09520 PF00440 Bacterial regulatory proteins, tetR family GOD87_09520 PF08359 YsiA-like protein, C-terminal region GOD87_09525 PF12706 Beta-lactamase superfamily domain GOD87_09535 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_09545 PF13411 MerR HTH family regulatory protein GOD87_09560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_09560 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_09565 PF00561 alpha/beta hydrolase fold GOD87_09575 PF00171 Aldehyde dehydrogenase family GOD87_09585 PF07690 Major Facilitator Superfamily GOD87_09590 PF00920 Dehydratase family GOD87_09595 PF07729 FCD domain GOD87_09595 PF00392 Bacterial regulatory proteins, gntR family GOD87_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_09605 PF03466 LysR substrate binding domain GOD87_09610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GOD87_09610 PF13378 Enolase C-terminal domain-like GOD87_09615 PF02426 Muconolactone delta-isomerase GOD87_09620 PF04444 Catechol dioxygenase N terminus GOD87_09620 PF00775 Dioxygenase GOD87_09625 PF01144 Coenzyme A transferase GOD87_09630 PF01144 Coenzyme A transferase GOD87_09635 PF00108 Thiolase, N-terminal domain GOD87_09635 PF02803 Thiolase, C-terminal domain GOD87_09640 PF12146 Serine aminopeptidase, S33 GOD87_09645 PF01804 Penicillin amidase GOD87_09650 PF00171 Aldehyde dehydrogenase family GOD87_09660 PF02728 Copper amine oxidase, N3 domain GOD87_09660 PF07833 Copper amine oxidase N-terminal domain GOD87_09660 PF02727 Copper amine oxidase, N2 domain GOD87_09660 PF01179 Copper amine oxidase, enzyme domain GOD87_09665 PF02311 AraC-like ligand binding domain GOD87_09665 PF12833 Helix-turn-helix domain GOD87_09670 PF01613 Flavin reductase like domain GOD87_09675 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_09675 PF00175 Oxidoreductase NAD-binding domain GOD87_09690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOD87_09690 PF00355 Rieske [2Fe-2S] domain GOD87_09705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOD87_09710 PF01425 Amidase GOD87_09720 PF07690 Major Facilitator Superfamily GOD87_09730 PF00106 short chain dehydrogenase GOD87_09745 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_09745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_09745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_09750 PF03466 LysR substrate binding domain GOD87_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_09755 PF01614 Bacterial transcriptional regulator GOD87_09755 PF09339 IclR helix-turn-helix domain GOD87_09760 PF00753 Metallo-beta-lactamase superfamily GOD87_09770 PF04143 Sulphur transport GOD87_09780 PF01011 PQQ enzyme repeat GOD87_09780 PF13360 PQQ-like domain GOD87_09785 PF04966 Carbohydrate-selective porin, OprB family GOD87_09790 PF05048 Periplasmic copper-binding protein (NosD) GOD87_09795 PF01487 Type I 3-dehydroquinase GOD87_09800 PF00775 Dioxygenase GOD87_09805 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal GOD87_09805 PF00775 Dioxygenase GOD87_09810 PF02627 Carboxymuconolactone decarboxylase family GOD87_09815 PF07690 Major Facilitator Superfamily GOD87_09820 PF00561 alpha/beta hydrolase fold GOD87_09825 PF00206 Lyase GOD87_09825 PF10397 Adenylosuccinate lyase C-terminus GOD87_09830 PF00108 Thiolase, N-terminal domain GOD87_09830 PF02803 Thiolase, C-terminal domain GOD87_09835 PF01144 Coenzyme A transferase GOD87_09840 PF01144 Coenzyme A transferase GOD87_09845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GOD87_09850 PF04977 Septum formation initiator GOD87_09855 PF04239 Protein of unknown function (DUF421) GOD87_09860 PF00113 Enolase, C-terminal TIM barrel domain GOD87_09860 PF03952 Enolase, N-terminal domain GOD87_09865 PF00793 DAHP synthetase I family GOD87_09870 PF06418 CTP synthase N-terminus GOD87_09870 PF00117 Glutamine amidotransferase class-I GOD87_09900 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_09900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_09915 PF00793 DAHP synthetase I family GOD87_09920 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GOD87_09925 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_09925 PF07724 AAA domain (Cdc48 subfamily) GOD87_09925 PF17871 AAA lid domain GOD87_09925 PF02861 Clp amino terminal domain, pathogenicity island component GOD87_09925 PF10431 C-terminal, D2-small domain, of ClpB protein GOD87_09930 PF02617 ATP-dependent Clp protease adaptor protein ClpS GOD87_09940 PF02774 Semialdehyde dehydrogenase, dimerisation domain GOD87_09940 PF01118 Semialdehyde dehydrogenase, NAD binding domain GOD87_09955 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GOD87_09960 PF00585 C-terminal regulatory domain of Threonine dehydratase GOD87_09960 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_09965 PF02254 TrkA-N domain GOD87_09965 PF02080 TrkA-C domain GOD87_09970 PF02386 Cation transport protein GOD87_09975 PF02253 Phospholipase A1 GOD87_09980 PF05193 Peptidase M16 inactive domain GOD87_09980 PF08367 Peptidase M16C associated GOD87_09980 PF00675 Insulinase (Peptidase family M16) GOD87_09985 PF00593 TonB dependent receptor GOD87_09985 PF07715 TonB-dependent Receptor Plug Domain GOD87_09990 PF00294 pfkB family carbohydrate kinase GOD87_10000 PF07290 Protein of unknown function (DUF1449) GOD87_10010 PF01654 Cytochrome bd terminal oxidase subunit I GOD87_10015 PF02322 Cytochrome bd terminal oxidase subunit II GOD87_10020 PF08173 Membrane bound YbgT-like protein GOD87_10035 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GOD87_10045 PF00448 SRP54-type protein, GTPase domain GOD87_10045 PF02881 SRP54-type protein, helical bundle domain GOD87_10070 PF00478 IMP dehydrogenase / GMP reductase domain GOD87_10070 PF00571 CBS domain GOD87_10075 PF00202 Aminotransferase class-III GOD87_10080 PF00462 Glutaredoxin GOD87_10090 PF03466 LysR substrate binding domain GOD87_10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_10095 PF00557 Metallopeptidase family M24 GOD87_10100 PF05525 Branched-chain amino acid transport protein GOD87_10125 PF02896 PEP-utilising enzyme, TIM barrel domain GOD87_10125 PF00381 PTS HPr component phosphorylation site GOD87_10125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GOD87_10125 PF00391 PEP-utilising enzyme, mobile domain GOD87_10125 PF05524 PEP-utilising enzyme, N-terminal GOD87_10130 PF00294 pfkB family carbohydrate kinase GOD87_10135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GOD87_10135 PF02378 Phosphotransferase system, EIIC GOD87_10155 PF00990 Diguanylate cyclase, GGDEF domain GOD87_10155 PF00563 EAL domain GOD87_10155 PF03707 Bacterial signalling protein N terminal repeat GOD87_10165 PF07995 Glucose / Sorbosone dehydrogenase GOD87_10170 PF02586 SOS response associated peptidase (SRAP) GOD87_10175 PF01740 STAS domain GOD87_10175 PF00916 Sulfate permease family GOD87_10180 PF05922 Peptidase inhibitor I9 GOD87_10180 PF00082 Subtilase family GOD87_10185 PF13737 Transposase DDE domain GOD87_10195 PF00324 Amino acid permease GOD87_10200 PF00266 Aminotransferase class-V GOD87_10205 PF01037 Lrp/AsnC ligand binding domain GOD87_10230 PF13419 Haloacid dehalogenase-like hydrolase GOD87_10235 PF01479 S4 domain GOD87_10240 PF00154 recA bacterial DNA recombination protein GOD87_10245 PF02631 RecX family GOD87_10260 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_10260 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GOD87_10265 PF07977 FabA-like domain GOD87_10270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GOD87_10270 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_10280 PF01103 Surface antigen GOD87_10280 PF07244 Surface antigen variable number repeat GOD87_10285 PF17820 PDZ domain GOD87_10285 PF13180 PDZ domain GOD87_10285 PF02163 Peptidase family M50 GOD87_10290 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GOD87_10290 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GOD87_10290 PF13288 DXP reductoisomerase C-terminal domain GOD87_10300 PF01255 Putative undecaprenyl diphosphate synthase GOD87_10305 PF01765 Ribosome recycling factor GOD87_10310 PF00696 Amino acid kinase family GOD87_10315 PF04055 Radical SAM superfamily GOD87_10315 PF18693 TRAM domain GOD87_10315 PF00919 Uncharacterized protein family UPF0004 GOD87_10325 PF00989 PAS fold GOD87_10325 PF00512 His Kinase A (phospho-acceptor) domain GOD87_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_10330 PF00072 Response regulator receiver domain GOD87_10330 PF00158 Sigma-54 interaction domain GOD87_10330 PF02954 Bacterial regulatory protein, Fis family GOD87_10335 PF00440 Bacterial regulatory proteins, tetR family GOD87_10340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GOD87_10340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GOD87_10350 PF02542 YgbB family GOD87_10360 PF01266 FAD dependent oxidoreductase GOD87_10380 PF10415 Fumarase C C-terminus GOD87_10380 PF00206 Lyase GOD87_10385 PF16363 GDP-mannose 4,6 dehydratase GOD87_10390 PF02635 DsrE/DsrF-like family GOD87_10410 PF00892 EamA-like transporter family GOD87_10415 PF00392 Bacterial regulatory proteins, gntR family GOD87_10415 PF00155 Aminotransferase class I and II GOD87_10420 PF01638 HxlR-like helix-turn-helix GOD87_10425 PF00994 Probable molybdopterin binding domain GOD87_10425 PF03454 MoeA C-terminal region (domain IV) GOD87_10425 PF03453 MoeA N-terminal region (domain I and II) GOD87_10430 PF00994 Probable molybdopterin binding domain GOD87_10430 PF01967 MoaC family GOD87_10435 PF02391 MoaE protein GOD87_10445 PF04055 Radical SAM superfamily GOD87_10445 PF06463 Molybdenum Cofactor Synthesis C GOD87_10450 PF01568 Molydopterin dinucleotide binding domain GOD87_10450 PF00384 Molybdopterin oxidoreductase GOD87_10450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOD87_10455 PF12804 MobA-like NTP transferase domain GOD87_10460 PF01568 Molydopterin dinucleotide binding domain GOD87_10460 PF04324 BFD-like [2Fe-2S] binding domain GOD87_10460 PF00384 Molybdopterin oxidoreductase GOD87_10460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOD87_10465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GOD87_10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_10465 PF04324 BFD-like [2Fe-2S] binding domain GOD87_10465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GOD87_10465 PF18267 Rubredoxin NAD+ reductase C-terminal domain GOD87_10470 PF18267 Rubredoxin NAD+ reductase C-terminal domain GOD87_10470 PF13806 Rieske-like [2Fe-2S] domain GOD87_10470 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_10470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GOD87_10470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GOD87_10470 PF04324 BFD-like [2Fe-2S] binding domain GOD87_10480 PF00072 Response regulator receiver domain GOD87_10480 PF00486 Transcriptional regulatory protein, C terminal GOD87_10485 PF00005 ABC transporter GOD87_10495 PF00817 impB/mucB/samB family GOD87_10495 PF11799 impB/mucB/samB family C-terminal domain GOD87_10495 PF13438 Domain of unknown function (DUF4113) GOD87_10500 PF01220 Dehydroquinase class II GOD87_10505 PF00364 Biotin-requiring enzyme GOD87_10510 PF02785 Biotin carboxylase C-terminal domain GOD87_10510 PF00289 Biotin carboxylase, N-terminal domain GOD87_10510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOD87_10520 PF12832 MFS_1 like family GOD87_10540 PF01645 Conserved region in glutamate synthase GOD87_10555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GOD87_10555 PF01565 FAD binding domain GOD87_10560 PF01451 Low molecular weight phosphotyrosine protein phosphatase GOD87_10570 PF00465 Iron-containing alcohol dehydrogenase GOD87_10575 PF03061 Thioesterase superfamily GOD87_10580 PF04185 Phosphoesterase family GOD87_10580 PF05506 Domain of unknown function (DUF756) GOD87_10585 PF12170 DNA polymerase III tau subunit V interacting with alpha GOD87_10585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GOD87_10585 PF12169 DNA polymerase III subunits gamma and tau domain III GOD87_10590 PF07690 Major Facilitator Superfamily GOD87_10615 PF02803 Thiolase, C-terminal domain GOD87_10615 PF00108 Thiolase, N-terminal domain GOD87_10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_10625 PF03466 LysR substrate binding domain GOD87_10635 PF01810 LysE type translocator GOD87_10640 PF01037 Lrp/AsnC ligand binding domain GOD87_10645 PF03594 Benzoate membrane transport protein GOD87_10650 PF02308 MgtC family GOD87_10655 PF00689 Cation transporting ATPase, C-terminus GOD87_10655 PF00690 Cation transporter/ATPase, N-terminus GOD87_10670 PF00582 Universal stress protein family GOD87_10675 PF00005 ABC transporter GOD87_10675 PF12848 ABC transporter GOD87_10695 PF07715 TonB-dependent Receptor Plug Domain GOD87_10695 PF00593 TonB dependent receptor GOD87_10725 PF00924 Mechanosensitive ion channel GOD87_10730 PF07715 TonB-dependent Receptor Plug Domain GOD87_10730 PF00593 TonB dependent receptor GOD87_10735 PF00440 Bacterial regulatory proteins, tetR family GOD87_10745 PF01037 Lrp/AsnC ligand binding domain GOD87_10750 PF01817 Chorismate mutase type II GOD87_10790 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GOD87_10790 PF11940 Domain of unknown function (DUF3458) Ig-like fold GOD87_10790 PF01433 Peptidase family M1 domain GOD87_10805 PF02110 Hydroxyethylthiazole kinase family GOD87_10815 PF14493 Helix-turn-helix domain GOD87_10815 PF05970 PIF1-like helicase GOD87_10820 PF00465 Iron-containing alcohol dehydrogenase GOD87_10835 PF00171 Aldehyde dehydrogenase family GOD87_10840 PF13520 Amino acid permease GOD87_10845 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GOD87_10850 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GOD87_10855 PF00117 Glutamine amidotransferase class-I GOD87_10855 PF00958 GMP synthase C terminal domain GOD87_10855 PF02540 NAD synthase GOD87_10860 PF00749 tRNA synthetases class I (E and Q), catalytic domain GOD87_10860 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GOD87_10865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GOD87_10870 PF00149 Calcineurin-like phosphoesterase GOD87_10880 PF00881 Nitroreductase family GOD87_10890 PF17209 Hfq protein GOD87_10900 PF08676 MutL C terminal dimerisation domain GOD87_10900 PF01119 DNA mismatch repair protein, C-terminal domain GOD87_10905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GOD87_10910 PF00849 RNA pseudouridylate synthase GOD87_10910 PF01479 S4 domain GOD87_10925 PF01479 S4 domain GOD87_10925 PF00849 RNA pseudouridylate synthase GOD87_10935 PF04284 Protein of unknown function (DUF441) GOD87_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_10940 PF03466 LysR substrate binding domain GOD87_10955 PF07690 Major Facilitator Superfamily GOD87_10960 PF00027 Cyclic nucleotide-binding domain GOD87_10960 PF00520 Ion transport protein GOD87_10970 PF11791 Aconitate B N-terminal domain GOD87_10970 PF06434 Aconitate hydratase 2 N-terminus GOD87_10970 PF00330 Aconitase family (aconitate hydratase) GOD87_10985 PF17243 POTRA domain TamA domain 1 GOD87_10985 PF07244 Surface antigen variable number repeat GOD87_10985 PF01103 Surface antigen GOD87_10990 PF07690 Major Facilitator Superfamily GOD87_10995 PF03232 Ubiquinone biosynthesis protein COQ7 GOD87_11005 PF00120 Glutamine synthetase, catalytic domain GOD87_11010 PF00486 Transcriptional regulatory protein, C terminal GOD87_11010 PF00072 Response regulator receiver domain GOD87_11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_11015 PF13493 Domain of unknown function (DUF4118) GOD87_11015 PF00512 His Kinase A (phospho-acceptor) domain GOD87_11015 PF02702 Osmosensitive K+ channel His kinase sensor domain GOD87_11020 PF02669 K+-transporting ATPase, c chain GOD87_11030 PF03814 Potassium-transporting ATPase A subunit GOD87_11045 PF03109 ABC1 family GOD87_11050 PF00899 ThiF family GOD87_11055 PF01613 Flavin reductase like domain GOD87_11060 PF13193 AMP-binding enzyme C-terminal domain GOD87_11060 PF00501 AMP-binding enzyme GOD87_11065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_11065 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_11065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_11070 PF00106 short chain dehydrogenase GOD87_11075 PF12833 Helix-turn-helix domain GOD87_11080 PF13847 Methyltransferase domain GOD87_11080 PF17827 PrmC N-terminal domain GOD87_11085 PF00472 RF-1 domain GOD87_11085 PF03462 PCRF domain GOD87_11095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_11095 PF03466 LysR substrate binding domain GOD87_11110 PF00296 Luciferase-like monooxygenase GOD87_11120 PF13994 PgaD-like protein GOD87_11125 PF00535 Glycosyl transferase family 2 GOD87_11130 PF14883 Hypothetical glycosyl hydrolase family 13 GOD87_11130 PF01522 Polysaccharide deacetylase GOD87_11140 PF03618 Kinase/pyrophosphorylase GOD87_11145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GOD87_11145 PF02896 PEP-utilising enzyme, TIM barrel domain GOD87_11145 PF00391 PEP-utilising enzyme, mobile domain GOD87_11155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GOD87_11155 PF06481 COX Aromatic Rich Motif GOD87_11160 PF00115 Cytochrome C and Quinol oxidase polypeptide I GOD87_11165 PF00510 Cytochrome c oxidase subunit III GOD87_11170 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GOD87_11175 PF01040 UbiA prenyltransferase family GOD87_11180 PF01250 Ribosomal protein S6 GOD87_11185 PF01084 Ribosomal protein S18 GOD87_11190 PF01281 Ribosomal protein L9, N-terminal domain GOD87_11190 PF03948 Ribosomal protein L9, C-terminal domain GOD87_11195 PF03796 DnaB-like helicase C terminal domain GOD87_11195 PF00772 DnaB-like helicase N terminal domain GOD87_11200 PF00842 Alanine racemase, C-terminal domain GOD87_11200 PF01168 Alanine racemase, N-terminal domain GOD87_11210 PF01841 Transglutaminase-like superfamily GOD87_11210 PF08379 Bacterial transglutaminase-like N-terminal region GOD87_11220 PF14403 Circularly permuted ATP-grasp type 2 GOD87_11230 PF01134 Glucose inhibited division protein A GOD87_11230 PF13932 GidA associated domain GOD87_11250 PF02954 Bacterial regulatory protein, Fis family GOD87_11255 PF02142 MGS-like domain GOD87_11255 PF01808 AICARFT/IMPCHase bienzyme GOD87_11260 PF02843 Phosphoribosylglycinamide synthetase, C domain GOD87_11260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GOD87_11260 PF02844 Phosphoribosylglycinamide synthetase, N domain GOD87_11265 PF03180 NLPA lipoprotein GOD87_11270 PF09383 NIL domain GOD87_11270 PF00005 ABC transporter GOD87_11275 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_11280 PF16123 Hydroxyacylglutathione hydrolase C-terminus GOD87_11280 PF00753 Metallo-beta-lactamase superfamily GOD87_11290 PF00375 Sodium:dicarboxylate symporter family GOD87_11310 PF07995 Glucose / Sorbosone dehydrogenase GOD87_11315 PF00892 EamA-like transporter family GOD87_11320 PF01177 Asp/Glu/Hydantoin racemase GOD87_11330 PF02470 MlaD protein GOD87_11335 PF04403 Paraquat-inducible protein A GOD87_11405 PF00392 Bacterial regulatory proteins, gntR family GOD87_11405 PF07729 FCD domain GOD87_11415 PF03616 Sodium/glutamate symporter GOD87_11420 PF00561 alpha/beta hydrolase fold GOD87_11445 PF04076 Bacterial OB fold (BOF) protein GOD87_11475 PF00324 Amino acid permease GOD87_11480 PF00171 Aldehyde dehydrogenase family GOD87_11485 PF00202 Aminotransferase class-III GOD87_11490 PF03466 LysR substrate binding domain GOD87_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_11515 PF00069 Protein kinase domain GOD87_11535 PF00814 Glycoprotease family GOD87_11540 PF01165 Ribosomal protein S21 GOD87_11545 PF09424 Yqey-like protein GOD87_11550 PF01435 Peptidase family M48 GOD87_11555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOD87_11555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOD87_11570 PF00156 Phosphoribosyl transferase domain GOD87_11575 PF02674 Colicin V production protein GOD87_11580 PF01180 Dihydroorotate dehydrogenase GOD87_11600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GOD87_11600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GOD87_11605 PF00881 Nitroreductase family GOD87_11615 PF00271 Helicase conserved C-terminal domain GOD87_11615 PF00270 DEAD/DEAH box helicase GOD87_11620 PF00313 'Cold-shock' DNA-binding domain GOD87_11630 PF00140 Sigma-70 factor, region 1.2 GOD87_11630 PF04545 Sigma-70, region 4 GOD87_11630 PF04542 Sigma-70 region 2 GOD87_11635 PF04241 Protein of unknown function (DUF423) GOD87_11645 PF05690 Thiazole biosynthesis protein ThiG GOD87_11650 PF03883 Peroxide stress protein YaaA GOD87_11660 PF00753 Metallo-beta-lactamase superfamily GOD87_11665 PF01546 Peptidase family M20/M25/M40 GOD87_11665 PF07687 Peptidase dimerisation domain GOD87_11675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GOD87_11680 PF01817 Chorismate mutase type II GOD87_11680 PF01842 ACT domain GOD87_11680 PF00800 Prephenate dehydratase GOD87_11685 PF00756 Putative esterase GOD87_11690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_11690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_11690 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_11695 PF00375 Sodium:dicarboxylate symporter family GOD87_11700 PF02885 Glycosyl transferase family, helical bundle domain GOD87_11700 PF00591 Glycosyl transferase family, a/b domain GOD87_11705 PF07023 Protein of unknown function (DUF1315) GOD87_11710 PF01513 ATP-NAD kinase GOD87_11715 PF00905 Penicillin binding protein transpeptidase domain GOD87_11715 PF00912 Transglycosylase GOD87_11715 PF14814 Bifunctional transglycosylase second domain GOD87_11725 PF00293 NUDIX domain GOD87_11735 PF00512 His Kinase A (phospho-acceptor) domain GOD87_11735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_11735 PF08521 Two-component sensor kinase N-terminal GOD87_11740 PF00072 Response regulator receiver domain GOD87_11740 PF00486 Transcriptional regulatory protein, C terminal GOD87_11750 PF00437 Type II/IV secretion system protein GOD87_11760 PF18389 TrmO C-terminal domain GOD87_11760 PF01980 tRNA-methyltransferase O GOD87_11765 PF00175 Oxidoreductase NAD-binding domain GOD87_11765 PF00970 Oxidoreductase FAD-binding domain GOD87_11770 PF02567 Phenazine biosynthesis-like protein GOD87_11775 PF00155 Aminotransferase class I and II GOD87_11775 PF00392 Bacterial regulatory proteins, gntR family GOD87_11785 PF00037 4Fe-4S binding domain GOD87_11790 PF00893 Small Multidrug Resistance protein GOD87_11795 PF00005 ABC transporter GOD87_11800 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_11805 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_11810 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOD87_11815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_11815 PF03466 LysR substrate binding domain GOD87_11820 PF13533 Biotin-lipoyl like GOD87_11825 PF00873 AcrB/AcrD/AcrF family GOD87_11830 PF02321 Outer membrane efflux protein GOD87_11835 PF00464 Serine hydroxymethyltransferase GOD87_11865 PF00005 ABC transporter GOD87_11870 PF01061 ABC-2 type transporter GOD87_11875 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GOD87_11875 PF14489 QueF-like protein GOD87_11885 PF01098 Cell cycle protein GOD87_11890 PF13406 Transglycosylase SLT domain GOD87_11895 PF03330 Lytic transglycolase GOD87_11895 PF05036 Sporulation related domain GOD87_11915 PF12833 Helix-turn-helix domain GOD87_11925 PF00889 Elongation factor TS GOD87_11930 PF00318 Ribosomal protein S2 GOD87_11935 PF00557 Metallopeptidase family M24 GOD87_11945 PF07690 Major Facilitator Superfamily GOD87_11955 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_11955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOD87_11960 PF04055 Radical SAM superfamily GOD87_11965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_11965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_11965 PF09317 Domain of unknown function (DUF1974) GOD87_11980 PF05221 S-adenosyl-L-homocysteine hydrolase GOD87_11980 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GOD87_11985 PF02219 Methylenetetrahydrofolate reductase GOD87_11990 PF04452 RNA methyltransferase GOD87_11995 PF03707 Bacterial signalling protein N terminal repeat GOD87_11995 PF00990 Diguanylate cyclase, GGDEF domain GOD87_11995 PF00563 EAL domain GOD87_12000 PF01515 Phosphate acetyl/butaryl transferase GOD87_12000 PF03949 Malic enzyme, NAD binding domain GOD87_12000 PF00390 Malic enzyme, N-terminal domain GOD87_12005 PF12627 Probable RNA and SrmB- binding site of polymerase A GOD87_12005 PF01743 Poly A polymerase head domain GOD87_12010 PF13180 PDZ domain GOD87_12015 PF01784 NIF3 (NGG1p interacting factor 3) GOD87_12020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GOD87_12020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GOD87_12055 PF01040 UbiA prenyltransferase family GOD87_12060 PF04345 Chorismate lyase GOD87_12070 PF00854 POT family GOD87_12080 PF00117 Glutamine amidotransferase class-I GOD87_12085 PF11838 ERAP1-like C-terminal domain GOD87_12085 PF01433 Peptidase family M1 domain GOD87_12090 PF07715 TonB-dependent Receptor Plug Domain GOD87_12090 PF00593 TonB dependent receptor GOD87_12095 PF00591 Glycosyl transferase family, a/b domain GOD87_12095 PF02885 Glycosyl transferase family, helical bundle domain GOD87_12100 PF00218 Indole-3-glycerol phosphate synthase GOD87_12115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GOD87_12115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOD87_12120 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_12120 PF01799 [2Fe-2S] binding domain GOD87_12130 PF00144 Beta-lactamase GOD87_12145 PF05675 Protein of unknown function (DUF817) GOD87_12150 PF01208 Uroporphyrinogen decarboxylase (URO-D) GOD87_12160 PF00425 chorismate binding enzyme GOD87_12170 PF00975 Thioesterase domain GOD87_12175 PF00664 ABC transporter transmembrane region GOD87_12175 PF00005 ABC transporter GOD87_12180 PF00664 ABC transporter transmembrane region GOD87_12180 PF00005 ABC transporter GOD87_12190 PF00282 Pyridoxal-dependent decarboxylase conserved domain GOD87_12195 PF00857 Isochorismatase family GOD87_12195 PF00550 Phosphopantetheine attachment site GOD87_12200 PF00501 AMP-binding enzyme GOD87_12200 PF13193 AMP-binding enzyme C-terminal domain GOD87_12205 PF00550 Phosphopantetheine attachment site GOD87_12205 PF00501 AMP-binding enzyme GOD87_12205 PF00668 Condensation domain GOD87_12210 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GOD87_12215 PF00593 TonB dependent receptor GOD87_12215 PF07715 TonB-dependent Receptor Plug Domain GOD87_12220 PF01497 Periplasmic binding protein GOD87_12225 PF00005 ABC transporter GOD87_12230 PF01032 FecCD transport family GOD87_12235 PF01032 FecCD transport family GOD87_12240 PF13193 AMP-binding enzyme C-terminal domain GOD87_12240 PF00550 Phosphopantetheine attachment site GOD87_12240 PF00668 Condensation domain GOD87_12240 PF00975 Thioesterase domain GOD87_12240 PF00501 AMP-binding enzyme GOD87_12245 PF00668 Condensation domain GOD87_12245 PF13193 AMP-binding enzyme C-terminal domain GOD87_12245 PF00550 Phosphopantetheine attachment site GOD87_12245 PF00501 AMP-binding enzyme GOD87_12255 PF08348 YheO-like PAS domain GOD87_12255 PF13309 HTH domain GOD87_12260 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_12265 PF02678 Pirin GOD87_12265 PF17954 Quercetinase C-terminal cupin domain GOD87_12280 PF00440 Bacterial regulatory proteins, tetR family GOD87_12285 PF02801 Beta-ketoacyl synthase, C-terminal domain GOD87_12285 PF08659 KR domain GOD87_12285 PF00550 Phosphopantetheine attachment site GOD87_12285 PF14765 Polyketide synthase dehydratase GOD87_12285 PF16197 Ketoacyl-synthetase C-terminal extension GOD87_12285 PF09277 Erythronolide synthase, docking GOD87_12285 PF00109 Beta-ketoacyl synthase, N-terminal domain GOD87_12285 PF08990 Erythronolide synthase docking GOD87_12285 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_12285 PF00698 Acyl transferase domain GOD87_12290 PF13378 Enolase C-terminal domain-like GOD87_12290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GOD87_12295 PF00083 Sugar (and other) transporter GOD87_12300 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GOD87_12310 PF00892 EamA-like transporter family GOD87_12330 PF01266 FAD dependent oxidoreductase GOD87_12330 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GOD87_12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_12335 PF18113 Rubredoxin binding C-terminal domain GOD87_12345 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOD87_12345 PF00355 Rieske [2Fe-2S] domain GOD87_12350 PF02028 BCCT, betaine/carnitine/choline family transporter GOD87_12355 PF00083 Sugar (and other) transporter GOD87_12360 PF00557 Metallopeptidase family M24 GOD87_12365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_12370 PF03466 LysR substrate binding domain GOD87_12375 PF12833 Helix-turn-helix domain GOD87_12375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOD87_12380 PF01370 NAD dependent epimerase/dehydratase family GOD87_12390 PF00561 alpha/beta hydrolase fold GOD87_12395 PF00743 Flavin-binding monooxygenase-like GOD87_12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_12405 PF03466 LysR substrate binding domain GOD87_12410 PF00857 Isochorismatase family GOD87_12450 PF04328 Selenoprotein, putative GOD87_12455 PF13722 5TM C-terminal transporter carbon starvation CstA GOD87_12455 PF02554 Carbon starvation protein CstA GOD87_12460 PF08207 Elongation factor P (EF-P) KOW-like domain GOD87_12460 PF09285 Elongation factor P, C-terminal GOD87_12460 PF01132 Elongation factor P (EF-P) OB domain GOD87_12465 PF04055 Radical SAM superfamily GOD87_12475 PF12792 CSS motif domain associated with EAL GOD87_12475 PF00563 EAL domain GOD87_12480 PF01197 Ribosomal protein L31 GOD87_12485 PF13593 SBF-like CPA transporter family (DUF4137) GOD87_12490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOD87_12495 PF07690 Major Facilitator Superfamily GOD87_12500 PF13654 AAA domain GOD87_12500 PF05362 Lon protease (S16) C-terminal proteolytic domain GOD87_12505 PF03466 LysR substrate binding domain GOD87_12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_12510 PF01476 LysM domain GOD87_12510 PF01551 Peptidase family M23 GOD87_12515 PF01975 Survival protein SurE GOD87_12530 PF07943 Penicillin-binding protein 5, C-terminal domain GOD87_12530 PF00768 D-alanyl-D-alanine carboxypeptidase GOD87_12535 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_12540 PF00293 NUDIX domain GOD87_12540 PF13344 Haloacid dehalogenase-like hydrolase GOD87_12550 PF04356 Protein of unknown function (DUF489) GOD87_12555 PF00206 Lyase GOD87_12555 PF08328 Adenylosuccinate lyase C-terminal GOD87_12570 PF01343 Peptidase family S49 GOD87_12570 PF08496 Peptidase family S49 N-terminal GOD87_12575 PF00005 ABC transporter GOD87_12580 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_12585 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_12590 PF12849 PBP superfamily domain GOD87_12595 PF00324 Amino acid permease GOD87_12600 PF00205 Thiamine pyrophosphate enzyme, central domain GOD87_12600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOD87_12600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOD87_12605 PF01037 Lrp/AsnC ligand binding domain GOD87_12610 PF00171 Aldehyde dehydrogenase family GOD87_12615 PF00282 Pyridoxal-dependent decarboxylase conserved domain GOD87_12620 PF00202 Aminotransferase class-III GOD87_12625 PF13340 Putative transposase of IS4/5 family (DUF4096) GOD87_12635 PF00440 Bacterial regulatory proteins, tetR family GOD87_12635 PF17754 MftR C-terminal domain GOD87_12645 PF00487 Fatty acid desaturase GOD87_12650 PF00175 Oxidoreductase NAD-binding domain GOD87_12650 PF00111 2Fe-2S iron-sulfur cluster binding domain GOD87_12650 PF00970 Oxidoreductase FAD-binding domain GOD87_12655 PF00440 Bacterial regulatory proteins, tetR family GOD87_12665 PF00271 Helicase conserved C-terminal domain GOD87_12665 PF18337 RapA N-terminal Tudor like domain GOD87_12665 PF00176 SNF2 family N-terminal domain GOD87_12665 PF18339 RapA N-terminal Tudor like domain 1 GOD87_12665 PF12137 RNA polymerase recycling family C-terminal GOD87_12670 PF00849 RNA pseudouridylate synthase GOD87_12680 PF00202 Aminotransferase class-III GOD87_12685 PF02581 Thiamine monophosphate synthase GOD87_12710 PF00675 Insulinase (Peptidase family M16) GOD87_12710 PF05193 Peptidase M16 inactive domain GOD87_12715 PF02567 Phenazine biosynthesis-like protein GOD87_12725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_12725 PF03466 LysR substrate binding domain GOD87_12730 PF06779 Uncharacterised MFS-type transporter YbfB GOD87_12750 PF00180 Isocitrate/isopropylmalate dehydrogenase GOD87_12755 PF00849 RNA pseudouridylate synthase GOD87_12760 PF03971 Monomeric isocitrate dehydrogenase GOD87_12770 PF07943 Penicillin-binding protein 5, C-terminal domain GOD87_12770 PF00768 D-alanyl-D-alanine carboxypeptidase GOD87_12775 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_12780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOD87_12785 PF00875 DNA photolyase GOD87_12785 PF03441 FAD binding domain of DNA photolyase GOD87_12815 PF02350 UDP-N-acetylglucosamine 2-epimerase GOD87_12830 PF03060 Nitronate monooxygenase GOD87_12835 PF01207 Dihydrouridine synthase (Dus) GOD87_12840 PF07759 Protein of unknown function (DUF1615) GOD87_12850 PF00696 Amino acid kinase family GOD87_12850 PF01472 PUA domain GOD87_12855 PF01018 GTP1/OBG GOD87_12855 PF01926 50S ribosome-binding GTPase GOD87_12870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GOD87_12870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GOD87_12875 PF00892 EamA-like transporter family GOD87_12885 PF04851 Type III restriction enzyme, res subunit GOD87_12885 PF02151 UvrB/uvrC motif GOD87_12885 PF00271 Helicase conserved C-terminal domain GOD87_12885 PF12344 Ultra-violet resistance protein B GOD87_12885 PF17757 UvrB interaction domain GOD87_12895 PF17151 Periplasmic sensor domain GOD87_12895 PF00990 Diguanylate cyclase, GGDEF domain GOD87_12935 PF00106 short chain dehydrogenase GOD87_12940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GOD87_12945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GOD87_12950 PF11967 Recombination protein O N terminal GOD87_12950 PF02565 Recombination protein O C terminal GOD87_12960 PF07650 KH domain GOD87_12960 PF01926 50S ribosome-binding GTPase GOD87_12965 PF14622 Ribonuclease-III-like GOD87_12965 PF00035 Double-stranded RNA binding motif GOD87_12975 PF10502 Signal peptidase, peptidase S26 GOD87_12980 PF03144 Elongation factor Tu domain 2 GOD87_12980 PF00009 Elongation factor Tu GTP binding domain GOD87_12980 PF00679 Elongation factor G C-terminus GOD87_12980 PF06421 GTP-binding protein LepA C-terminus GOD87_12990 PF13180 PDZ domain GOD87_12995 PF00890 FAD binding domain GOD87_12995 PF02910 Fumarate reductase flavoprotein C-term GOD87_13005 PF02223 Thymidylate kinase GOD87_13010 PF02618 YceG-like family GOD87_13015 PF01063 Amino-transferase class IV GOD87_13030 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_13035 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_13040 PF12857 TOBE-like domain GOD87_13040 PF00005 ABC transporter GOD87_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_13045 PF03466 LysR substrate binding domain GOD87_13055 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GOD87_13055 PF14602 Hexapeptide repeat of succinyl-transferase GOD87_13055 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_13065 PF06508 Queuosine biosynthesis protein QueC GOD87_13080 PF00578 AhpC/TSA family GOD87_13090 PF01467 Cytidylyltransferase-like GOD87_13090 PF00293 NUDIX domain GOD87_13095 PF00378 Enoyl-CoA hydratase/isomerase GOD87_13100 PF01784 NIF3 (NGG1p interacting factor 3) GOD87_13105 PF07690 Major Facilitator Superfamily GOD87_13110 PF02769 AIR synthase related protein, C-terminal domain GOD87_13110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GOD87_13110 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GOD87_13115 PF01966 HD domain GOD87_13120 PF01330 RuvA N terminal domain GOD87_13120 PF07499 RuvA, C-terminal domain GOD87_13125 PF05496 Holliday junction DNA helicase RuvB P-loop domain GOD87_13125 PF17864 RuvB AAA lid domain GOD87_13125 PF05491 RuvB C-terminal winged helix domain GOD87_13130 PF07687 Peptidase dimerisation domain GOD87_13130 PF01546 Peptidase family M20/M25/M40 GOD87_13135 PF03061 Thioesterase superfamily GOD87_13140 PF01618 MotA/TolQ/ExbB proton channel family GOD87_13145 PF02472 Biopolymer transport protein ExbD/TolR GOD87_13155 PF04052 TolB amino-terminal domain GOD87_13155 PF07676 WD40-like Beta Propeller Repeat GOD87_13160 PF00691 OmpA family GOD87_13170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GOD87_13175 PF00588 SpoU rRNA Methylase family GOD87_13175 PF08032 RNA 2'-O ribose methyltransferase substrate binding GOD87_13205 PF00308 Bacterial dnaA protein GOD87_13205 PF08299 Bacterial dnaA protein helix-turn-helix GOD87_13205 PF11638 DnaA N-terminal domain GOD87_13210 PF01594 AI-2E family transporter GOD87_13215 PF02769 AIR synthase related protein, C-terminal domain GOD87_13215 PF00586 AIR synthase related protein, N-terminal domain GOD87_13220 PF00551 Formyl transferase GOD87_13225 PF12697 Alpha/beta hydrolase family GOD87_13230 PF06965 Na+/H+ antiporter 1 GOD87_13230 PF01343 Peptidase family S49 GOD87_13240 PF13567 Domain of unknown function (DUF4131) GOD87_13240 PF03772 Competence protein GOD87_13240 PF00753 Metallo-beta-lactamase superfamily GOD87_13245 PF00005 ABC transporter GOD87_13250 PF12704 MacB-like periplasmic core domain GOD87_13250 PF02687 FtsX-like permease family GOD87_13260 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GOD87_13270 PF00266 Aminotransferase class-V GOD87_13280 PF13533 Biotin-lipoyl like GOD87_13300 PF00535 Glycosyl transferase family 2 GOD87_13320 PF00521 DNA gyrase/topoisomerase IV, subunit A GOD87_13320 PF03989 DNA gyrase C-terminal domain, beta-propeller GOD87_13325 PF01012 Electron transfer flavoprotein domain GOD87_13325 PF00766 Electron transfer flavoprotein FAD-binding domain GOD87_13330 PF01012 Electron transfer flavoprotein domain GOD87_13335 PF00589 Phage integrase family GOD87_13335 PF02899 Phage integrase, N-terminal SAM-like domain GOD87_13340 PF01810 LysE type translocator GOD87_13345 PF00561 alpha/beta hydrolase fold GOD87_13350 PF01678 Diaminopimelate epimerase GOD87_13355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GOD87_13355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GOD87_13365 PF00324 Amino acid permease GOD87_13370 PF18073 Rubredoxin metal binding domain GOD87_13380 PF00152 tRNA synthetases class II (D, K and N) GOD87_13385 PF11890 Domain of unknown function (DUF3410) GOD87_13385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOD87_13385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOD87_13390 PF06803 Protein of unknown function (DUF1232) GOD87_13395 PF02634 FdhD/NarQ family GOD87_13400 PF00384 Molybdopterin oxidoreductase GOD87_13405 PF02595 Glycerate kinase family GOD87_13420 PF00881 Nitroreductase family GOD87_13455 PF09857 Putative toxin of bacterial toxin-antitoxin pair GOD87_13465 PF00501 AMP-binding enzyme GOD87_13465 PF00668 Condensation domain GOD87_13465 PF13193 AMP-binding enzyme C-terminal domain GOD87_13465 PF00550 Phosphopantetheine attachment site GOD87_13465 PF00975 Thioesterase domain GOD87_13480 PF03449 Transcription elongation factor, N-terminal GOD87_13480 PF01272 Transcription elongation factor, GreA/GreB, C-term GOD87_13485 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOD87_13485 PF01464 Transglycosylase SLT domain GOD87_13495 PF01171 PP-loop family GOD87_13500 PF01464 Transglycosylase SLT domain GOD87_13505 PF01435 Peptidase family M48 GOD87_13515 PF00873 AcrB/AcrD/AcrF family GOD87_13520 PF03009 Glycerophosphoryl diester phosphodiesterase family GOD87_13525 PF00753 Metallo-beta-lactamase superfamily GOD87_13530 PF01219 Prokaryotic diacylglycerol kinase GOD87_13535 PF00118 TCP-1/cpn60 chaperonin family GOD87_13540 PF00166 Chaperonin 10 Kd subunit GOD87_13550 PF00149 Calcineurin-like phosphoesterase GOD87_13555 PF00781 Diacylglycerol kinase catalytic domain GOD87_13560 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain GOD87_13560 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain GOD87_13565 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GOD87_13565 PF01266 FAD dependent oxidoreductase GOD87_13570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GOD87_13570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GOD87_13575 PF00083 Sugar (and other) transporter GOD87_13590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GOD87_13590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GOD87_13605 PF09423 PhoD-like phosphatase GOD87_13605 PF16655 PhoD-like phosphatase, N-terminal domain GOD87_13625 PF00809 Pterin binding enzyme GOD87_13630 PF17862 AAA+ lid domain GOD87_13630 PF06480 FtsH Extracellular GOD87_13630 PF01434 Peptidase family M41 GOD87_13630 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_13635 PF01728 FtsJ-like methyltransferase GOD87_13640 PF01985 CRS1 / YhbY (CRM) domain GOD87_13655 PF00117 Glutamine amidotransferase class-I GOD87_13655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GOD87_13660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOD87_13660 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GOD87_13660 PF02142 MGS-like domain GOD87_13665 PF01272 Transcription elongation factor, GreA/GreB, C-term GOD87_13665 PF03449 Transcription elongation factor, N-terminal GOD87_13670 PF00440 Bacterial regulatory proteins, tetR family GOD87_13675 PF01042 Endoribonuclease L-PSP GOD87_13680 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_13685 PF00582 Universal stress protein family GOD87_13690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GOD87_13700 PF09587 Bacterial capsule synthesis protein PGA_cap GOD87_13730 PF00999 Sodium/hydrogen exchanger family GOD87_13735 PF04228 Putative neutral zinc metallopeptidase GOD87_13740 PF05661 Protein of unknown function (DUF808) GOD87_13745 PF00579 tRNA synthetases class I (W and Y) GOD87_13750 PF00549 CoA-ligase GOD87_13750 PF02629 CoA binding domain GOD87_13755 PF08442 ATP-grasp domain GOD87_13755 PF00549 CoA-ligase GOD87_13760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOD87_13760 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_13765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GOD87_13765 PF00364 Biotin-requiring enzyme GOD87_13765 PF02817 e3 binding domain GOD87_13770 PF16078 2-oxoglutarate dehydrogenase N-terminus GOD87_13770 PF16870 2-oxoglutarate dehydrogenase C-terminal GOD87_13770 PF02779 Transketolase, pyrimidine binding domain GOD87_13770 PF00676 Dehydrogenase E1 component GOD87_13785 PF13085 2Fe-2S iron-sulfur cluster binding domain GOD87_13790 PF00890 FAD binding domain GOD87_13790 PF02910 Fumarate reductase flavoprotein C-term GOD87_13795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GOD87_13800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GOD87_13805 PF00285 Citrate synthase, C-terminal domain GOD87_13840 PF04546 Sigma-70, non-essential region GOD87_13840 PF04542 Sigma-70 region 2 GOD87_13840 PF04539 Sigma-70 region 3 GOD87_13840 PF03979 Sigma-70 factor, region 1.1 GOD87_13840 PF04545 Sigma-70, region 4 GOD87_13840 PF00140 Sigma-70 factor, region 1.2 GOD87_13845 PF04359 Protein of unknown function (DUF493) GOD87_13850 PF03099 Biotin/lipoate A/B protein ligase family GOD87_13860 PF00465 Iron-containing alcohol dehydrogenase GOD87_13865 PF13520 Amino acid permease GOD87_13870 PF03358 NADPH-dependent FMN reductase GOD87_13880 PF00588 SpoU rRNA Methylase family GOD87_13885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GOD87_13885 PF14824 Sirohaem biosynthesis protein central GOD87_13885 PF10414 Sirohaem synthase dimerisation region GOD87_13890 PF02403 Seryl-tRNA synthetase N-terminal domain GOD87_13890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GOD87_13900 PF03548 Outer membrane lipoprotein carrier protein LolA GOD87_13905 PF01016 Ribosomal L27 protein GOD87_13910 PF00829 Ribosomal prokaryotic L21 protein GOD87_13920 PF00348 Polyprenyl synthetase GOD87_13930 PF01569 PAP2 superfamily GOD87_13935 PF00529 HlyD membrane-fusion protein of T1SS GOD87_13935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_13940 PF00873 AcrB/AcrD/AcrF family GOD87_13945 PF02321 Outer membrane efflux protein GOD87_13950 PF01906 Putative heavy-metal-binding GOD87_13955 PF01906 Putative heavy-metal-binding GOD87_13975 PF10458 Valyl tRNA synthetase tRNA binding arm GOD87_13975 PF08264 Anticodon-binding domain of tRNA GOD87_13975 PF00133 tRNA synthetases class I (I, L, M and V) GOD87_13995 PF03466 LysR substrate binding domain GOD87_13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_14000 PF00909 Ammonium Transporter Family GOD87_14010 PF00512 His Kinase A (phospho-acceptor) domain GOD87_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_14010 PF08521 Two-component sensor kinase N-terminal GOD87_14015 PF00072 Response regulator receiver domain GOD87_14015 PF00486 Transcriptional regulatory protein, C terminal GOD87_14020 PF08019 Phosphoethanolamine transferase EptA/EptB GOD87_14020 PF00884 Sulfatase GOD87_14040 PF01734 Patatin-like phospholipase GOD87_14050 PF01145 SPFH domain / Band 7 family GOD87_14055 PF04237 YjbR GOD87_14060 PF00348 Polyprenyl synthetase GOD87_14065 PF04303 PrpF protein GOD87_14070 PF00324 Amino acid permease GOD87_14080 PF00589 Phage integrase family GOD87_14080 PF13356 Arm DNA-binding domain GOD87_14110 PF00772 DnaB-like helicase N terminal domain GOD87_14110 PF03796 DnaB-like helicase C terminal domain GOD87_14160 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_14170 PF01965 DJ-1/PfpI family GOD87_14175 PF08659 KR domain GOD87_14175 PF02801 Beta-ketoacyl synthase, C-terminal domain GOD87_14175 PF00109 Beta-ketoacyl synthase, N-terminal domain GOD87_14175 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_14175 PF09277 Erythronolide synthase, docking GOD87_14175 PF08990 Erythronolide synthase docking GOD87_14175 PF00550 Phosphopantetheine attachment site GOD87_14175 PF16197 Ketoacyl-synthetase C-terminal extension GOD87_14175 PF14765 Polyketide synthase dehydratase GOD87_14175 PF00698 Acyl transferase domain GOD87_14180 PF12833 Helix-turn-helix domain GOD87_14180 PF06719 AraC-type transcriptional regulator N-terminus GOD87_14185 PF02673 Bacitracin resistance protein BacA GOD87_14205 PF02525 Flavodoxin-like fold GOD87_14220 PF01507 Phosphoadenosine phosphosulfate reductase family GOD87_14225 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain GOD87_14225 PF06974 Protein of unknown function (DUF1298) GOD87_14235 PF10150 Ribonuclease E/G family GOD87_14235 PF00575 S1 RNA binding domain GOD87_14240 PF02545 Maf-like protein GOD87_14245 PF04093 rod shape-determining protein MreD GOD87_14250 PF04085 rod shape-determining protein MreC GOD87_14260 PF02686 Glu-tRNAGln amidotransferase C subunit GOD87_14265 PF01425 Amidase GOD87_14270 PF02637 GatB domain GOD87_14270 PF02934 GatB/GatE catalytic domain GOD87_14300 PF05992 SbmA/BacA-like family GOD87_14305 PF13291 ACT domain GOD87_14305 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_14310 PF01734 Patatin-like phospholipase GOD87_14315 PF01235 Sodium:alanine symporter family GOD87_14330 PF00881 Nitroreductase family GOD87_14335 PF07690 Major Facilitator Superfamily GOD87_14340 PF12805 FUSC-like inner membrane protein yccS GOD87_14350 PF00258 Flavodoxin GOD87_14350 PF00667 FAD binding domain GOD87_14350 PF00175 Oxidoreductase NAD-binding domain GOD87_14390 PF17969 L,D-transpeptidase C-terminal domain GOD87_14390 PF03734 L,D-transpeptidase catalytic domain GOD87_14395 PF04304 Protein of unknown function (DUF454) GOD87_14405 PF08085 Entericidin EcnA/B family GOD87_14410 PF07687 Peptidase dimerisation domain GOD87_14410 PF01546 Peptidase family M20/M25/M40 GOD87_14420 PF00072 Response regulator receiver domain GOD87_14420 PF01584 CheW-like domain GOD87_14420 PF01627 Hpt domain GOD87_14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_14425 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GOD87_14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOD87_14430 PF01584 CheW-like domain GOD87_14435 PF00072 Response regulator receiver domain GOD87_14440 PF00072 Response regulator receiver domain GOD87_14455 PF00873 AcrB/AcrD/AcrF family GOD87_14460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GOD87_14460 PF03129 Anticodon binding domain GOD87_14460 PF04073 Aminoacyl-tRNA editing domain GOD87_14465 PF07411 Domain of unknown function (DUF1508) GOD87_14470 PF03831 PhnA domain GOD87_14470 PF08274 PhnA Zinc-Ribbon GOD87_14475 PF04343 Protein of unknown function, DUF488 GOD87_14485 PF01571 Aminomethyltransferase folate-binding domain GOD87_14490 PF13098 Thioredoxin-like domain GOD87_14490 PF10411 Disulfide bond isomerase protein N-terminus GOD87_14500 PF03547 Membrane transport protein GOD87_14505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_14510 PF07715 TonB-dependent Receptor Plug Domain GOD87_14510 PF00593 TonB dependent receptor GOD87_14515 PF02245 Methylpurine-DNA glycosylase (MPG) GOD87_14520 PF06827 Zinc finger found in FPG and IleRS GOD87_14520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GOD87_14520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GOD87_14535 PF01741 Large-conductance mechanosensitive channel, MscL GOD87_14545 PF00860 Permease family GOD87_14550 PF08468 Methyltransferase small domain N-terminal GOD87_14550 PF05175 Methyltransferase small domain GOD87_14555 PF00324 Amino acid permease GOD87_14560 PF01139 tRNA-splicing ligase RtcB GOD87_14565 PF00691 OmpA family GOD87_14565 PF13505 Outer membrane protein beta-barrel domain GOD87_14575 PF02803 Thiolase, C-terminal domain GOD87_14575 PF00108 Thiolase, N-terminal domain GOD87_14585 PF00893 Small Multidrug Resistance protein GOD87_14595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GOD87_14595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GOD87_14600 PF01011 PQQ enzyme repeat GOD87_14605 PF04966 Carbohydrate-selective porin, OprB family GOD87_14610 PF02515 CoA-transferase family III GOD87_14615 PF12833 Helix-turn-helix domain GOD87_14615 PF02311 AraC-like ligand binding domain GOD87_14620 PF00108 Thiolase, N-terminal domain GOD87_14620 PF02803 Thiolase, C-terminal domain GOD87_14625 PF00378 Enoyl-CoA hydratase/isomerase GOD87_14625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOD87_14625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOD87_14650 PF03006 Haemolysin-III related GOD87_14655 PF07690 Major Facilitator Superfamily GOD87_14655 PF00083 Sugar (and other) transporter GOD87_14665 PF02810 SEC-C motif GOD87_14665 PF07517 SecA DEAD-like domain GOD87_14665 PF01043 SecA preprotein cross-linking domain GOD87_14665 PF07516 SecA Wing and Scaffold domain GOD87_14670 PF00578 AhpC/TSA family GOD87_14670 PF10417 C-terminal domain of 1-Cys peroxiredoxin GOD87_14675 PF00753 Metallo-beta-lactamase superfamily GOD87_14690 PF08245 Mur ligase middle domain GOD87_14690 PF02875 Mur ligase family, glutamate ligase domain GOD87_14695 PF01039 Carboxyl transferase domain GOD87_14700 PF00290 Tryptophan synthase alpha chain GOD87_14725 PF00291 Pyridoxal-phosphate dependent enzyme GOD87_14730 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GOD87_14735 PF07715 TonB-dependent Receptor Plug Domain GOD87_14735 PF00593 TonB dependent receptor GOD87_14740 PF01923 Cobalamin adenosyltransferase GOD87_14760 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GOD87_14765 PF00072 Response regulator receiver domain GOD87_14765 PF00486 Transcriptional regulatory protein, C terminal GOD87_14770 PF00672 HAMP domain GOD87_14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_14770 PF00512 His Kinase A (phospho-acceptor) domain GOD87_14780 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_14780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_14780 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOD87_14780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_14785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_14785 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_14785 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOD87_14785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_14790 PF06146 Phosphate-starvation-inducible E GOD87_14810 PF07715 TonB-dependent Receptor Plug Domain GOD87_14810 PF00593 TonB dependent receptor GOD87_14820 PF00152 tRNA synthetases class II (D, K and N) GOD87_14820 PF02938 GAD domain GOD87_14820 PF01336 OB-fold nucleic acid binding domain GOD87_14835 PF00535 Glycosyl transferase family 2 GOD87_14840 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GOD87_14845 PF00483 Nucleotidyl transferase GOD87_14850 PF04321 RmlD substrate binding domain GOD87_14855 PF16363 GDP-mannose 4,6 dehydratase GOD87_14865 PF13439 Glycosyltransferase Family 4 GOD87_14865 PF00534 Glycosyl transferases group 1 GOD87_14870 PF01522 Polysaccharide deacetylase GOD87_14880 PF01063 Amino-transferase class IV GOD87_14885 PF03710 Glutamate-ammonia ligase adenylyltransferase GOD87_14885 PF08335 GlnD PII-uridylyltransferase GOD87_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_14890 PF00512 His Kinase A (phospho-acceptor) domain GOD87_14890 PF07689 KaiB domain GOD87_14900 PF02547 Queuosine biosynthesis protein GOD87_14925 PF01702 Queuine tRNA-ribosyltransferase GOD87_14930 PF02699 Preprotein translocase subunit GOD87_14935 PF02355 Protein export membrane protein GOD87_14935 PF07549 SecD/SecF GG Motif GOD87_14935 PF13721 SecD export protein N-terminal TM region GOD87_14940 PF02355 Protein export membrane protein GOD87_14940 PF07549 SecD/SecF GG Motif GOD87_14945 PF04127 DNA / pantothenate metabolism flavoprotein GOD87_14945 PF02441 Flavoprotein GOD87_14950 PF04002 RadC-like JAB domain GOD87_14955 PF01062 Bestrophin, RFP-TM, chloride channel GOD87_14960 PF02811 PHP domain GOD87_14965 PF04279 Intracellular septation protein A GOD87_14970 PF03795 YCII-related domain GOD87_14980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GOD87_14980 PF01266 FAD dependent oxidoreductase GOD87_14990 PF04461 Protein of unknown function (DUF520) GOD87_15000 PF03061 Thioesterase superfamily GOD87_15005 PF00085 Thioredoxin GOD87_15010 PF00561 alpha/beta hydrolase fold GOD87_15015 PF04273 Putative phosphatase (DUF442) GOD87_15015 PF00753 Metallo-beta-lactamase superfamily GOD87_15025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOD87_15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_15060 PF17152 Periplasmic sensor domain GOD87_15060 PF00990 Diguanylate cyclase, GGDEF domain GOD87_15065 PF00691 OmpA family GOD87_15065 PF01389 OmpA-like transmembrane domain GOD87_15070 PF10518 TAT (twin-arginine translocation) pathway signal sequence GOD87_15070 PF00149 Calcineurin-like phosphoesterase GOD87_15075 PF13091 PLD-like domain GOD87_15085 PF01926 50S ribosome-binding GTPase GOD87_15085 PF13167 GTP-binding GTPase N-terminal GOD87_15085 PF16360 GTP-binding GTPase Middle Region GOD87_15105 PF00149 Calcineurin-like phosphoesterase GOD87_15110 PF00398 Ribosomal RNA adenine dimethylase GOD87_15115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GOD87_15120 PF00572 Ribosomal protein L13 GOD87_15125 PF00380 Ribosomal protein S9/S16 GOD87_15130 PF00043 Glutathione S-transferase, C-terminal domain GOD87_15130 PF13417 Glutathione S-transferase, N-terminal domain GOD87_15135 PF04386 Stringent starvation protein B GOD87_15145 PF00289 Biotin carboxylase, N-terminal domain GOD87_15145 PF00364 Biotin-requiring enzyme GOD87_15145 PF02785 Biotin carboxylase C-terminal domain GOD87_15145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOD87_15155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_15155 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_15155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_15160 PF01039 Carboxyl transferase domain GOD87_15175 PF17932 Tetracyclin repressor-like, C-terminal domain GOD87_15175 PF00440 Bacterial regulatory proteins, tetR family GOD87_15180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_15180 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_15180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_15225 PF01066 CDP-alcohol phosphatidyltransferase GOD87_15230 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GOD87_15250 PF00056 lactate/malate dehydrogenase, NAD binding domain GOD87_15250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GOD87_15260 PF10145 Phage-related minor tail protein GOD87_15260 PF01464 Transglycosylase SLT domain GOD87_15260 PF01551 Peptidase family M23 GOD87_15265 PF01938 TRAM domain GOD87_15265 PF00919 Uncharacterized protein family UPF0004 GOD87_15265 PF04055 Radical SAM superfamily GOD87_15270 PF02562 PhoH-like protein GOD87_15275 PF02130 Uncharacterized protein family UPF0054 GOD87_15300 PF03358 NADPH-dependent FMN reductase GOD87_15305 PF03631 Virulence factor BrkB GOD87_15310 PF00892 EamA-like transporter family GOD87_15315 PF12833 Helix-turn-helix domain GOD87_15320 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOD87_15365 PF17876 Cold shock domain GOD87_15365 PF00575 S1 RNA binding domain GOD87_15365 PF00773 RNB domain GOD87_15365 PF08461 Ribonuclease R winged-helix domain GOD87_15365 PF08206 Ribonuclease B OB domain GOD87_15370 PF01432 Peptidase family M3 GOD87_15375 PF09526 Probable metal-binding protein (DUF2387) GOD87_15405 PF03937 Flavinator of succinate dehydrogenase GOD87_15410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_15410 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_15410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_15415 PF00743 Flavin-binding monooxygenase-like GOD87_15420 PF01196 Ribosomal protein L17 GOD87_15425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GOD87_15425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GOD87_15425 PF01000 RNA polymerase Rpb3/RpoA insert domain GOD87_15430 PF01479 S4 domain GOD87_15430 PF00163 Ribosomal protein S4/S9 N-terminal domain GOD87_15435 PF00411 Ribosomal protein S11 GOD87_15440 PF00416 Ribosomal protein S13/S18 GOD87_15445 PF00444 Ribosomal protein L36 GOD87_15450 PF00344 SecY translocase GOD87_15455 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GOD87_15460 PF00327 Ribosomal protein L30p/L7e GOD87_15465 PF03719 Ribosomal protein S5, C-terminal domain GOD87_15465 PF00333 Ribosomal protein S5, N-terminal domain GOD87_15470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GOD87_15475 PF00347 Ribosomal protein L6 GOD87_15480 PF00410 Ribosomal protein S8 GOD87_15485 PF00253 Ribosomal protein S14p/S29e GOD87_15490 PF00673 ribosomal L5P family C-terminus GOD87_15490 PF00281 Ribosomal protein L5 GOD87_15495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GOD87_15495 PF00467 KOW motif GOD87_15500 PF00238 Ribosomal protein L14p/L23e GOD87_15505 PF00366 Ribosomal protein S17 GOD87_15510 PF00831 Ribosomal L29 protein GOD87_15515 PF00252 Ribosomal protein L16p/L10e GOD87_15520 PF00189 Ribosomal protein S3, C-terminal domain GOD87_15520 PF07650 KH domain GOD87_15525 PF00237 Ribosomal protein L22p/L17e GOD87_15530 PF00203 Ribosomal protein S19 GOD87_15535 PF00181 Ribosomal Proteins L2, RNA binding domain GOD87_15535 PF03947 Ribosomal Proteins L2, C-terminal domain GOD87_15540 PF00276 Ribosomal protein L23 GOD87_15545 PF00573 Ribosomal protein L4/L1 family GOD87_15550 PF00297 Ribosomal protein L3 GOD87_15555 PF00338 Ribosomal protein S10p/S20e GOD87_15560 PF00117 Glutamine amidotransferase class-I GOD87_15565 PF01053 Cys/Met metabolism PLP-dependent enzyme GOD87_15570 PF05872 Bacterial protein of unknown function (DUF853) GOD87_15575 PF00042 Globin GOD87_15575 PF00175 Oxidoreductase NAD-binding domain GOD87_15575 PF00970 Oxidoreductase FAD-binding domain GOD87_15580 PF02082 Transcriptional regulator GOD87_15585 PF01926 50S ribosome-binding GTPase GOD87_15595 PF00375 Sodium:dicarboxylate symporter family GOD87_15605 PF01553 Acyltransferase GOD87_15620 PF00270 DEAD/DEAH box helicase GOD87_15620 PF00271 Helicase conserved C-terminal domain GOD87_15620 PF17191 RecG wedge domain GOD87_15625 PF00156 Phosphoribosyl transferase domain GOD87_15630 PF00293 NUDIX domain GOD87_15635 PF03641 Possible lysine decarboxylase GOD87_15640 PF01544 CorA-like Mg2+ transporter protein GOD87_15650 PF05494 MlaC protein GOD87_15660 PF02405 Permease MlaE GOD87_15665 PF00005 ABC transporter GOD87_15675 PF00271 Helicase conserved C-terminal domain GOD87_15675 PF12343 Cold shock protein DEAD box A GOD87_15675 PF03880 DbpA RNA binding domain GOD87_15675 PF00270 DEAD/DEAH box helicase GOD87_15680 PF00459 Inositol monophosphatase family GOD87_15685 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GOD87_15685 PF02779 Transketolase, pyrimidine binding domain GOD87_15685 PF02780 Transketolase, C-terminal domain GOD87_15690 PF00925 GTP cyclohydrolase II GOD87_15695 PF01218 Coproporphyrinogen III oxidase GOD87_15700 PF08501 Shikimate dehydrogenase substrate binding domain GOD87_15700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GOD87_15700 PF01488 Shikimate / quinate 5-dehydrogenase GOD87_15710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOD87_15710 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOD87_15710 PF02770 Acyl-CoA dehydrogenase, middle domain GOD87_15710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOD87_15720 PF04024 PspC domain GOD87_15725 PF00571 CBS domain GOD87_15740 PF07690 Major Facilitator Superfamily GOD87_15745 PF02091 Glycyl-tRNA synthetase alpha subunit GOD87_15750 PF05746 DALR anticodon binding domain GOD87_15750 PF02092 Glycyl-tRNA synthetase beta subunit GOD87_15765 PF00892 EamA-like transporter family GOD87_15770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_15770 PF03466 LysR substrate binding domain GOD87_15800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GOD87_15805 PF04996 Succinylarginine dihydrolase GOD87_15810 PF00171 Aldehyde dehydrogenase family GOD87_15815 PF04958 Arginine N-succinyltransferase beta subunit GOD87_15820 PF00202 Aminotransferase class-III GOD87_15825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GOD87_15825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GOD87_15830 PF00324 Amino acid permease GOD87_15860 PF13614 AAA domain GOD87_15865 PF01594 AI-2E family transporter GOD87_15870 PF00080 Copper/zinc superoxide dismutase (SODC) GOD87_15875 PF12805 FUSC-like inner membrane protein yccS GOD87_15880 PF07690 Major Facilitator Superfamily GOD87_15890 PF02525 Flavodoxin-like fold GOD87_15895 PF03992 Antibiotic biosynthesis monooxygenase GOD87_15905 PF02913 FAD linked oxidases, C-terminal domain GOD87_15905 PF01565 FAD binding domain GOD87_15910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOD87_15910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOD87_15915 PF00892 EamA-like transporter family GOD87_15920 PF00892 EamA-like transporter family GOD87_15930 PF01925 Sulfite exporter TauE/SafE GOD87_15935 PF09157 Pseudouridine synthase II TruB, C-terminal GOD87_15935 PF16198 tRNA pseudouridylate synthase B C-terminal domain GOD87_15935 PF01509 TruB family pseudouridylate synthase (N terminal domain) GOD87_15940 PF03280 Proteobacterial lipase chaperone protein GOD87_15945 PF00561 alpha/beta hydrolase fold GOD87_15950 PF01245 Ribosomal protein L19 GOD87_15955 PF01746 tRNA (Guanine-1)-methyltransferase GOD87_15960 PF01782 RimM N-terminal domain GOD87_15960 PF05239 PRC-barrel domain GOD87_15965 PF00886 Ribosomal protein S16 GOD87_16005 PF02401 LytB protein GOD87_16010 PF00625 Guanylate kinase GOD87_16015 PF01192 RNA polymerase Rpb6 GOD87_16025 PF02824 TGS domain GOD87_16025 PF13291 ACT domain GOD87_16025 PF04607 Region found in RelA / SpoT proteins GOD87_16030 PF01042 Endoribonuclease L-PSP GOD87_16035 PF04324 BFD-like [2Fe-2S] binding domain GOD87_16040 PF00210 Ferritin-like domain GOD87_16045 PF04932 O-Antigen ligase GOD87_16045 PF11846 Virulence factor membrane-bound polymerase, C-terminal GOD87_16045 PF15864 Protein glycosylation ligase GOD87_16050 PF00114 Pilin (bacterial filament) GOD87_16050 PF07963 Prokaryotic N-terminal methylation motif GOD87_16060 PF04536 TPM domain GOD87_16065 PF04011 LemA family GOD87_16075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GOD87_16075 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOD87_16080 PF01493 GXGXG motif GOD87_16080 PF01645 Conserved region in glutamate synthase GOD87_16080 PF04898 Glutamate synthase central domain GOD87_16080 PF00310 Glutamine amidotransferases class-II GOD87_16090 PF01761 3-dehydroquinate synthase GOD87_16095 PF01202 Shikimate kinase GOD87_16100 PF00263 Bacterial type II and III secretion system protein GOD87_16100 PF03958 Bacterial type II/III secretion system short domain GOD87_16100 PF11741 AMIN domain GOD87_16100 PF07660 Secretin and TonB N terminus short domain GOD87_16125 PF17092 Penicillin-binding protein OB-like domain GOD87_16125 PF00912 Transglycosylase GOD87_16125 PF00905 Penicillin binding protein transpeptidase domain GOD87_16130 PF13847 Methyltransferase domain GOD87_16140 PF00953 Glycosyl transferase family 4 GOD87_16145 PF08245 Mur ligase middle domain GOD87_16145 PF02875 Mur ligase family, glutamate ligase domain GOD87_16145 PF01225 Mur ligase family, catalytic domain GOD87_16150 PF02875 Mur ligase family, glutamate ligase domain GOD87_16150 PF08245 Mur ligase middle domain GOD87_16150 PF01225 Mur ligase family, catalytic domain GOD87_16155 PF00905 Penicillin binding protein transpeptidase domain GOD87_16155 PF03717 Penicillin-binding Protein dimerisation domain GOD87_16165 PF01795 MraW methylase family GOD87_16180 PF00749 tRNA synthetases class I (E and Q), catalytic domain GOD87_16195 PF00324 Amino acid permease GOD87_16225 PF01545 Cation efflux family GOD87_16230 PF00873 AcrB/AcrD/AcrF family GOD87_16235 PF00529 HlyD membrane-fusion protein of T1SS GOD87_16235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_16255 PF04191 Phospholipid methyltransferase GOD87_16280 PF12848 ABC transporter GOD87_16280 PF00005 ABC transporter GOD87_16285 PF01053 Cys/Met metabolism PLP-dependent enzyme GOD87_16290 PF00106 short chain dehydrogenase GOD87_16295 PF01740 STAS domain GOD87_16295 PF00916 Sulfate permease family GOD87_16300 PF17674 HHH domain GOD87_16300 PF09371 Tex-like protein N-terminal domain GOD87_16300 PF16921 Tex protein YqgF-like domain GOD87_16300 PF00575 S1 RNA binding domain GOD87_16305 PF00072 Response regulator receiver domain GOD87_16305 PF00486 Transcriptional regulatory protein, C terminal GOD87_16310 PF00512 His Kinase A (phospho-acceptor) domain GOD87_16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_16310 PF00672 HAMP domain GOD87_16320 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GOD87_16320 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GOD87_16325 PF00583 Acetyltransferase (GNAT) family GOD87_16345 PF00475 Imidazoleglycerol-phosphate dehydratase GOD87_16350 PF00117 Glutamine amidotransferase class-I GOD87_16365 PF00977 Histidine biosynthesis protein GOD87_16390 PF01636 Phosphotransferase enzyme family GOD87_16395 PF00977 Histidine biosynthesis protein GOD87_16410 PF00230 Major intrinsic protein GOD87_16435 PF02705 K+ potassium transporter GOD87_16455 PF02525 Flavodoxin-like fold GOD87_16460 PF01638 HxlR-like helix-turn-helix GOD87_16480 PF12833 Helix-turn-helix domain GOD87_16480 PF02311 AraC-like ligand binding domain GOD87_16485 PF00248 Aldo/keto reductase family GOD87_16505 PF03466 LysR substrate binding domain GOD87_16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_16510 PF07690 Major Facilitator Superfamily GOD87_16530 PF01593 Flavin containing amine oxidoreductase GOD87_16535 PF05726 Pirin C-terminal cupin domain GOD87_16535 PF02678 Pirin GOD87_16540 PF00857 Isochorismatase family GOD87_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_16550 PF00171 Aldehyde dehydrogenase family GOD87_16555 PF00202 Aminotransferase class-III GOD87_16560 PF00155 Aminotransferase class I and II GOD87_16560 PF00392 Bacterial regulatory proteins, gntR family GOD87_16565 PF00324 Amino acid permease GOD87_16575 PF03591 AzlC protein GOD87_16585 PF00436 Single-strand binding protein family GOD87_16590 PF07690 Major Facilitator Superfamily GOD87_16600 PF02581 Thiamine monophosphate synthase GOD87_16600 PF08543 Phosphomethylpyrimidine kinase GOD87_16600 PF03070 TENA/THI-4/PQQC family GOD87_16605 PF06942 GlpM protein GOD87_16615 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_16615 PF00107 Zinc-binding dehydrogenase GOD87_16620 PF00440 Bacterial regulatory proteins, tetR family GOD87_16620 PF16925 Tetracyclin repressor-like, C-terminal domain GOD87_16625 PF00005 ABC transporter GOD87_16625 PF17760 UvrA interaction domain GOD87_16625 PF17755 UvrA DNA-binding domain GOD87_16635 PF17158 Membrane-associated sensor, integral membrane domain GOD87_16635 PF00990 Diguanylate cyclase, GGDEF domain GOD87_16645 PF02028 BCCT, betaine/carnitine/choline family transporter GOD87_16655 PF00474 Sodium:solute symporter family GOD87_16660 PF04341 Protein of unknown function, DUF485 GOD87_16665 PF00072 Response regulator receiver domain GOD87_16665 PF01627 Hpt domain GOD87_16665 PF00512 His Kinase A (phospho-acceptor) domain GOD87_16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_16665 PF00672 HAMP domain GOD87_16675 PF00196 Bacterial regulatory proteins, luxR family GOD87_16675 PF00072 Response regulator receiver domain GOD87_16680 PF03358 NADPH-dependent FMN reductase GOD87_16685 PF00296 Luciferase-like monooxygenase GOD87_16690 PF01037 Lrp/AsnC ligand binding domain GOD87_16695 PF00857 Isochorismatase family GOD87_16700 PF16177 Acetyl-coenzyme A synthetase N-terminus GOD87_16700 PF00501 AMP-binding enzyme GOD87_16700 PF13193 AMP-binding enzyme C-terminal domain GOD87_16710 PF00924 Mechanosensitive ion channel GOD87_16715 PF04452 RNA methyltransferase GOD87_16720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GOD87_16725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOD87_16745 PF02272 DHHA1 domain GOD87_16745 PF01368 DHH family GOD87_16745 PF17768 RecJ OB domain GOD87_16750 PF01243 Pyridoxamine 5'-phosphate oxidase GOD87_16750 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GOD87_16755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GOD87_16755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GOD87_16755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GOD87_16755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GOD87_16760 PF00571 CBS domain GOD87_16760 PF00478 IMP dehydrogenase / GMP reductase domain GOD87_16765 PF03692 Putative zinc- or iron-chelating domain GOD87_16770 PF00258 Flavodoxin GOD87_16770 PF01613 Flavin reductase like domain GOD87_16775 PF00593 TonB dependent receptor GOD87_16775 PF07715 TonB-dependent Receptor Plug Domain GOD87_16780 PF01169 Uncharacterized protein family UPF0016 GOD87_16790 PF00364 Biotin-requiring enzyme GOD87_16790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GOD87_16790 PF02817 e3 binding domain GOD87_16795 PF00456 Transketolase, thiamine diphosphate binding domain GOD87_16795 PF17831 Pyruvate dehydrogenase E1 component middle domain GOD87_16800 PF01551 Peptidase family M23 GOD87_16810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GOD87_16815 PF12327 FtsZ family, C-terminal domain GOD87_16815 PF00091 Tubulin/FtsZ family, GTPase domain GOD87_16820 PF02491 SHS2 domain inserted in FTSA GOD87_16825 PF08478 POTRA domain, FtsQ-type GOD87_16825 PF03799 Cell division protein FtsQ GOD87_16830 PF01820 D-ala D-ala ligase N-terminus GOD87_16830 PF07478 D-ala D-ala ligase C-terminus GOD87_16835 PF01225 Mur ligase family, catalytic domain GOD87_16835 PF02875 Mur ligase family, glutamate ligase domain GOD87_16835 PF08245 Mur ligase middle domain GOD87_16840 PF04101 Glycosyltransferase family 28 C-terminal domain GOD87_16840 PF03033 Glycosyltransferase family 28 N-terminal domain GOD87_16845 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GOD87_16845 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GOD87_16855 PF00593 TonB dependent receptor GOD87_16855 PF07715 TonB-dependent Receptor Plug Domain GOD87_16860 PF00156 Phosphoribosyl transferase domain GOD87_16865 PF03372 Endonuclease/Exonuclease/phosphatase family GOD87_16870 PF03960 ArsC family GOD87_16880 PF07859 alpha/beta hydrolase fold GOD87_16885 PF07694 5TMR of 5TMR-LYT GOD87_16885 PF00990 Diguanylate cyclase, GGDEF domain GOD87_16890 PF02683 Cytochrome C biogenesis protein transmembrane region GOD87_16890 PF11412 Disulphide bond corrector protein DsbC GOD87_16920 PF00576 HIUase/Transthyretin family GOD87_16925 PF00860 Permease family GOD87_16935 PF01494 FAD binding domain GOD87_16940 PF03561 Allantoicase repeat GOD87_16945 PF04115 Ureidoglycolate lyase GOD87_16950 PF00106 short chain dehydrogenase GOD87_16955 PF01751 Toprim domain GOD87_16955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_16955 PF00986 DNA gyrase B subunit, carboxyl terminus GOD87_16955 PF00204 DNA gyrase B GOD87_16960 PF05728 Uncharacterised protein family (UPF0227) GOD87_16975 PF03373 Octapeptide repeat GOD87_16975 PF01476 LysM domain GOD87_16975 PF04650 YSIRK type signal peptide GOD87_16975 PF02216 B domain GOD87_16975 PF00746 LPXTG cell wall anchor motif GOD87_16985 PF04717 Type VI secretion system, phage-baseplate injector GOD87_16990 PF02600 Disulfide bond formation protein DsbB GOD87_16995 PF04262 Glutamate-cysteine ligase GOD87_17010 PF04286 Protein of unknown function (DUF445) GOD87_17015 PF00155 Aminotransferase class I and II GOD87_17020 PF01554 MatE GOD87_17025 PF00106 short chain dehydrogenase GOD87_17035 PF00072 Response regulator receiver domain GOD87_17035 PF00486 Transcriptional regulatory protein, C terminal GOD87_17040 PF11808 Phosphate regulon sensor protein PhoR GOD87_17040 PF00989 PAS fold GOD87_17040 PF00512 His Kinase A (phospho-acceptor) domain GOD87_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_17055 PF03069 Acetamidase/Formamidase family GOD87_17060 PF02666 Phosphatidylserine decarboxylase GOD87_17065 PF00581 Rhodanese-like domain GOD87_17070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GOD87_17070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GOD87_17075 PF02580 D-Tyr-tRNA(Tyr) deacylase GOD87_17100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GOD87_17100 PF00925 GTP cyclohydrolase II GOD87_17105 PF00885 6,7-dimethyl-8-ribityllumazine synthase GOD87_17110 PF01029 NusB family GOD87_17115 PF00586 AIR synthase related protein, N-terminal domain GOD87_17115 PF02769 AIR synthase related protein, C-terminal domain GOD87_17120 PF04608 Phosphatidylglycerophosphatase A GOD87_17125 PF12804 MobA-like NTP transferase domain GOD87_17125 PF14602 Hexapeptide repeat of succinyl-transferase GOD87_17125 PF00132 Bacterial transferase hexapeptide (six repeats) GOD87_17130 PF01380 SIS domain GOD87_17135 PF01177 Asp/Glu/Hydantoin racemase GOD87_17140 PF13419 Haloacid dehalogenase-like hydrolase GOD87_17150 PF00491 Arginase family GOD87_17155 PF01979 Amidohydrolase family GOD87_17160 PF00324 Amino acid permease GOD87_17165 PF00221 Aromatic amino acid lyase GOD87_17170 PF17391 Urocanase N-terminal domain GOD87_17170 PF17392 Urocanase C-terminal domain GOD87_17170 PF01175 Urocanase Rossmann-like domain GOD87_17175 PF05962 HutD GOD87_17180 PF00392 Bacterial regulatory proteins, gntR family GOD87_17180 PF07702 UTRA domain GOD87_17190 PF07683 Cobalamin synthesis protein cobW C-terminal domain GOD87_17190 PF02492 CobW/HypB/UreG, nucleotide-binding domain GOD87_17200 PF00324 Amino acid permease GOD87_17210 PF14497 Glutathione S-transferase, C-terminal domain GOD87_17210 PF02798 Glutathione S-transferase, N-terminal domain GOD87_17215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOD87_17225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOD87_17230 PF04463 Protein of unknown function (DUF523) GOD87_17235 PF01554 MatE GOD87_17240 PF01758 Sodium Bile acid symporter family GOD87_17245 PF00857 Isochorismatase family GOD87_17250 PF00701 Dihydrodipicolinate synthetase family GOD87_17260 PF01259 SAICAR synthetase GOD87_17270 PF01226 Formate/nitrite transporter GOD87_17275 PF12002 MgsA AAA+ ATPase C terminal GOD87_17275 PF00004 ATPase family associated with various cellular activities (AAA) GOD87_17275 PF16193 AAA C-terminal domain GOD87_17280 PF07995 Glucose / Sorbosone dehydrogenase GOD87_17285 PF03692 Putative zinc- or iron-chelating domain GOD87_17290 PF07043 Protein of unknown function (DUF1328) GOD87_17295 PF02230 Phospholipase/Carboxylesterase GOD87_17305 PF10576 Iron-sulfur binding domain of endonuclease III GOD87_17305 PF00633 Helix-hairpin-helix motif GOD87_17305 PF14815 NUDIX domain GOD87_17305 PF00730 HhH-GPD superfamily base excision DNA repair protein GOD87_17320 PF03352 Methyladenine glycosylase GOD87_17325 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_17325 PF00107 Zinc-binding dehydrogenase GOD87_17330 PF00392 Bacterial regulatory proteins, gntR family GOD87_17330 PF00155 Aminotransferase class I and II GOD87_17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_17345 PF03466 LysR substrate binding domain GOD87_17350 PF00248 Aldo/keto reductase family GOD87_17355 PF07690 Major Facilitator Superfamily GOD87_17365 PF05173 Dihydrodipicolinate reductase, C-terminus GOD87_17365 PF01113 Dihydrodipicolinate reductase, N-terminus GOD87_17375 PF00684 DnaJ central domain GOD87_17375 PF01556 DnaJ C terminal domain GOD87_17375 PF00226 DnaJ domain GOD87_17385 PF00873 AcrB/AcrD/AcrF family GOD87_17390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOD87_17395 PF08361 MAATS-type transcriptional repressor, C-terminal region GOD87_17395 PF00440 Bacterial regulatory proteins, tetR family GOD87_17400 PF00311 Phosphoenolpyruvate carboxylase GOD87_17405 PF00860 Permease family GOD87_17410 PF03466 LysR substrate binding domain GOD87_17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOD87_17425 PF00920 Dehydratase family GOD87_17430 PF00551 Formyl transferase GOD87_17430 PF02911 Formyl transferase, C-terminal domain GOD87_17435 PF01029 NusB family GOD87_17435 PF01189 16S rRNA methyltransferase RsmB/F GOD87_17445 PF00209 Sodium:neurotransmitter symporter family GOD87_17455 PF02798 Glutathione S-transferase, N-terminal domain GOD87_17455 PF00043 Glutathione S-transferase, C-terminal domain GOD87_17485 PF00579 tRNA synthetases class I (W and Y) GOD87_17490 PF03702 Anhydro-N-acetylmuramic acid kinase GOD87_17495 PF00561 alpha/beta hydrolase fold GOD87_17500 PF01521 Iron-sulphur cluster biosynthesis GOD87_17520 PF12848 ABC transporter GOD87_17520 PF00005 ABC transporter GOD87_17525 PF09335 SNARE associated Golgi protein GOD87_17535 PF01751 Toprim domain GOD87_17535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOD87_17535 PF00986 DNA gyrase B subunit, carboxyl terminus GOD87_17535 PF00204 DNA gyrase B GOD87_17535 PF18053 DNA gyrase B subunit insert domain GOD87_17540 PF02463 RecF/RecN/SMC N terminal domain GOD87_17545 PF00712 DNA polymerase III beta subunit, N-terminal domain GOD87_17545 PF02767 DNA polymerase III beta subunit, central domain GOD87_17545 PF02768 DNA polymerase III beta subunit, C-terminal domain GOD87_17550 PF11638 DnaA N-terminal domain GOD87_17550 PF08299 Bacterial dnaA protein helix-turn-helix GOD87_17550 PF00308 Bacterial dnaA protein GOD87_17555 PF00468 Ribosomal protein L34 GOD87_17560 PF00825 Ribonuclease P GOD87_17565 PF01809 Putative membrane protein insertion efficiency factor GOD87_17570 PF02096 60Kd inner membrane protein GOD87_17570 PF14849 YidC periplasmic domain GOD87_17575 PF12631 MnmE helical domain GOD87_17575 PF01926 50S ribosome-binding GTPase GOD87_17575 PF10396 GTP-binding protein TrmE N-terminus GOD87_17580 PF02583 Metal-sensitive transcriptional repressor GOD87_17585 PF01545 Cation efflux family GOD87_17585 PF16916 Dimerisation domain of Zinc Transporter GOD87_17590 PF10411 Disulfide bond isomerase protein N-terminus GOD87_17590 PF13098 Thioredoxin-like domain GOD87_17600 PF00156 Phosphoribosyl transferase domain GOD87_17605 PF01979 Amidohydrolase family GOD87_17610 PF00355 Rieske [2Fe-2S] domain GOD87_17615 PF03738 Glutathionylspermidine synthase preATP-grasp GOD87_17625 PF03741 Integral membrane protein TerC family GOD87_17630 PF01569 PAP2 superfamily GOD87_17640 PF01225 Mur ligase family, catalytic domain GOD87_17640 PF02875 Mur ligase family, glutamate ligase domain GOD87_17640 PF08245 Mur ligase middle domain GOD87_17650 PF00731 AIR carboxylase GOD87_17655 PF02222 ATP-grasp domain GOD87_17655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GOD87_17660 PF13406 Transglycosylase SLT domain GOD87_17680 PF00012 Hsp70 protein GOD87_17685 PF01025 GrpE GOD87_17710 PF07859 alpha/beta hydrolase fold GOD87_17715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GOD87_17755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOD87_17760 PF01252 Signal peptidase (SPase) II GOD87_17765 PF08264 Anticodon-binding domain of tRNA GOD87_17765 PF00133 tRNA synthetases class I (I, L, M and V) GOD87_17765 PF06827 Zinc finger found in FPG and IleRS GOD87_17770 PF06574 FAD synthetase GOD87_17770 PF01687 Riboflavin kinase GOD87_17780 PF01048 Phosphorylase superfamily GOD87_17785 PF08362 YcdC-like protein, C-terminal region GOD87_17785 PF00440 Bacterial regulatory proteins, tetR family GOD87_17790 PF00005 ABC transporter GOD87_17795 PF00528 Binding-protein-dependent transport system inner membrane component GOD87_17800 PF00296 Luciferase-like monooxygenase GOD87_17805 PF09084 NMT1/THI5 like GOD87_17810 PF09084 NMT1/THI5 like GOD87_17815 PF00696 Amino acid kinase family GOD87_17815 PF00583 Acetyltransferase (GNAT) family GOD87_17830 PF00106 short chain dehydrogenase GOD87_17835 PF13419 Haloacid dehalogenase-like hydrolase GOD87_17845 PF01323 DSBA-like thioredoxin domain GOD87_17850 PF08360 QacR-like protein, C-terminal region GOD87_17850 PF00440 Bacterial regulatory proteins, tetR family GOD87_17855 PF00440 Bacterial regulatory proteins, tetR family GOD87_17860 PF00268 Ribonucleotide reductase, small chain GOD87_17900 PF00929 Exonuclease GOD87_17960 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOD87_17960 PF12833 Helix-turn-helix domain GOD87_17965 PF13438 Domain of unknown function (DUF4113) GOD87_17965 PF00817 impB/mucB/samB family GOD87_17965 PF11799 impB/mucB/samB family C-terminal domain GOD87_17970 PF00717 Peptidase S24-like GOD87_18020 PF00756 Putative esterase GOD87_18025 PF00107 Zinc-binding dehydrogenase GOD87_18025 PF08240 Alcohol dehydrogenase GroES-like domain GOD87_18030 PF02583 Metal-sensitive transcriptional repressor GOD87_18055 PF01476 LysM domain GOD87_18055 PF04650 YSIRK type signal peptide GOD87_18055 PF03373 Octapeptide repeat GOD87_18055 PF00746 LPXTG cell wall anchor motif GOD87_18055 PF02216 B domain GOD87_18070 PF00271 Helicase conserved C-terminal domain GOD87_18070 PF17191 RecG wedge domain GOD87_18070 PF00270 DEAD/DEAH box helicase GOD87_18090 PF00005 ABC transporter GOD87_18090 PF09383 NIL domain GOD87_18270 PF10410 DnaB-helicase binding domain of primase GOD87_18270 PF08275 DNA primase catalytic core, N-terminal domain GOD87_18270 PF01807 CHC2 zinc finger GOD87_18305 PF00625 Guanylate kinase GOD87_18320 PF07015 VirC1 protein GOD87_18330 PF02899 Phage integrase, N-terminal SAM-like domain GOD87_18330 PF00589 Phage integrase family GOD87_18365 PF07733 Bacterial DNA polymerase III alpha NTPase domain GOD87_18365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GOD87_18365 PF14579 Helix-hairpin-helix motif GOD87_18365 PF02811 PHP domain GOD87_18380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GOD87_18380 PF01367 5'-3' exonuclease, C-terminal SAM fold GOD87_18380 PF01612 3'-5' exonuclease GOD87_18380 PF00476 DNA polymerase family A GOD87_18385 PF00154 recA bacterial DNA recombination protein GOD87_18410 PF06470 SMC proteins Flexible Hinge Domain GOD87_18410 PF02463 RecF/RecN/SMC N terminal domain GOD87_18430 PF02867 Ribonucleotide reductase, barrel domain GOD87_18430 PF00317 Ribonucleotide reductase, all-alpha domain GOD87_18430 PF03477 ATP cone domain