locus-tag class description A4U85_00005 PF00308 Bacterial dnaA protein A4U85_00005 PF08299 Bacterial dnaA protein helix-turn-helix A4U85_00005 PF11638 DnaA N-terminal domain A4U85_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain A4U85_00010 PF02767 DNA polymerase III beta subunit, central domain A4U85_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain A4U85_00015 PF02463 RecF/RecN/SMC N terminal domain A4U85_00020 PF00986 DNA gyrase B subunit, carboxyl terminus A4U85_00020 PF18053 DNA gyrase B subunit insert domain A4U85_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_00020 PF01751 Toprim domain A4U85_00020 PF00204 DNA gyrase B A4U85_00030 PF09335 SNARE associated Golgi protein A4U85_00035 PF12848 ABC transporter A4U85_00035 PF00005 ABC transporter A4U85_00055 PF01521 Iron-sulphur cluster biosynthesis A4U85_00060 PF00561 alpha/beta hydrolase fold A4U85_00065 PF03702 Anhydro-N-acetylmuramic acid kinase A4U85_00070 PF00579 tRNA synthetases class I (W and Y) A4U85_00105 PF00043 Glutathione S-transferase, C-terminal domain A4U85_00105 PF02798 Glutathione S-transferase, N-terminal domain A4U85_00115 PF00209 Sodium:neurotransmitter symporter family A4U85_00125 PF01029 NusB family A4U85_00125 PF01189 16S rRNA methyltransferase RsmB/F A4U85_00130 PF02911 Formyl transferase, C-terminal domain A4U85_00130 PF00551 Formyl transferase A4U85_00135 PF00920 Dehydratase family A4U85_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_00150 PF03466 LysR substrate binding domain A4U85_00155 PF00860 Permease family A4U85_00160 PF00311 Phosphoenolpyruvate carboxylase A4U85_00165 PF00440 Bacterial regulatory proteins, tetR family A4U85_00165 PF08361 MAATS-type transcriptional repressor, C-terminal region A4U85_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_00175 PF00873 AcrB/AcrD/AcrF family A4U85_00185 PF01556 DnaJ C terminal domain A4U85_00185 PF00226 DnaJ domain A4U85_00185 PF00684 DnaJ central domain A4U85_00195 PF05173 Dihydrodipicolinate reductase, C-terminus A4U85_00195 PF01113 Dihydrodipicolinate reductase, N-terminus A4U85_00205 PF07690 Major Facilitator Superfamily A4U85_00210 PF00248 Aldo/keto reductase family A4U85_00215 PF03466 LysR substrate binding domain A4U85_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_00225 PF00155 Aminotransferase class I and II A4U85_00225 PF00392 Bacterial regulatory proteins, gntR family A4U85_00230 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_00230 PF00107 Zinc-binding dehydrogenase A4U85_00235 PF03352 Methyladenine glycosylase A4U85_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein A4U85_00250 PF10576 Iron-sulfur binding domain of endonuclease III A4U85_00250 PF00633 Helix-hairpin-helix motif A4U85_00250 PF14815 NUDIX domain A4U85_00265 PF07043 Protein of unknown function (DUF1328) A4U85_00270 PF03692 Putative zinc- or iron-chelating domain A4U85_00275 PF07995 Glucose / Sorbosone dehydrogenase A4U85_00280 PF00004 ATPase family associated with various cellular activities (AAA) A4U85_00280 PF16193 AAA C-terminal domain A4U85_00280 PF12002 MgsA AAA+ ATPase C terminal A4U85_00285 PF01226 Formate/nitrite transporter A4U85_00295 PF01259 SAICAR synthetase A4U85_00305 PF00701 Dihydrodipicolinate synthetase family A4U85_00310 PF00857 Isochorismatase family A4U85_00315 PF01758 Sodium Bile acid symporter family A4U85_00325 PF04463 Protein of unknown function (DUF523) A4U85_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U85_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U85_00345 PF14497 Glutathione S-transferase, C-terminal domain A4U85_00345 PF02798 Glutathione S-transferase, N-terminal domain A4U85_00355 PF00324 Amino acid permease A4U85_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4U85_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain A4U85_00375 PF00392 Bacterial regulatory proteins, gntR family A4U85_00375 PF07702 UTRA domain A4U85_00380 PF05962 HutD A4U85_00385 PF01175 Urocanase Rossmann-like domain A4U85_00385 PF17392 Urocanase C-terminal domain A4U85_00385 PF17391 Urocanase N-terminal domain A4U85_00390 PF00221 Aromatic amino acid lyase A4U85_00395 PF00324 Amino acid permease A4U85_00400 PF01979 Amidohydrolase family A4U85_00405 PF00491 Arginase family A4U85_00415 PF13419 Haloacid dehalogenase-like hydrolase A4U85_00420 PF01177 Asp/Glu/Hydantoin racemase A4U85_00425 PF01380 SIS domain A4U85_00430 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_00430 PF14602 Hexapeptide repeat of succinyl-transferase A4U85_00430 PF12804 MobA-like NTP transferase domain A4U85_00435 PF04608 Phosphatidylglycerophosphatase A A4U85_00440 PF00586 AIR synthase related protein, N-terminal domain A4U85_00440 PF02769 AIR synthase related protein, C-terminal domain A4U85_00445 PF01029 NusB family A4U85_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase A4U85_00455 PF00925 GTP cyclohydrolase II A4U85_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A4U85_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase A4U85_00485 PF06628 Catalase-related immune-responsive A4U85_00485 PF00199 Catalase A4U85_00495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A4U85_00495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A4U85_00500 PF00581 Rhodanese-like domain A4U85_00505 PF02666 Phosphatidylserine decarboxylase A4U85_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_00515 PF00512 His Kinase A (phospho-acceptor) domain A4U85_00515 PF00989 PAS fold A4U85_00515 PF11808 Phosphate regulon sensor protein PhoR A4U85_00520 PF00072 Response regulator receiver domain A4U85_00520 PF00486 Transcriptional regulatory protein, C terminal A4U85_00530 PF00106 short chain dehydrogenase A4U85_00535 PF01554 MatE A4U85_00540 PF00155 Aminotransferase class I and II A4U85_00545 PF04286 Protein of unknown function (DUF445) A4U85_00560 PF04262 Glutamate-cysteine ligase A4U85_00565 PF02600 Disulfide bond formation protein DsbB A4U85_00570 PF04717 Type VI secretion system, phage-baseplate injector A4U85_00580 PF00182 Chitinase class I A4U85_00595 PF05728 Uncharacterised protein family (UPF0227) A4U85_00600 PF00204 DNA gyrase B A4U85_00600 PF01751 Toprim domain A4U85_00600 PF00986 DNA gyrase B subunit, carboxyl terminus A4U85_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_00605 PF00106 short chain dehydrogenase A4U85_00610 PF04115 Ureidoglycolate lyase A4U85_00615 PF03561 Allantoicase repeat A4U85_00620 PF01494 FAD binding domain A4U85_00630 PF00860 Permease family A4U85_00635 PF00576 HIUase/Transthyretin family A4U85_00665 PF02683 Cytochrome C biogenesis protein transmembrane region A4U85_00665 PF11412 Disulphide bond corrector protein DsbC A4U85_00670 PF07694 5TMR of 5TMR-LYT A4U85_00670 PF00990 Diguanylate cyclase, GGDEF domain A4U85_00675 PF07859 alpha/beta hydrolase fold A4U85_00685 PF03960 ArsC family A4U85_00690 PF03372 Endonuclease/Exonuclease/phosphatase family A4U85_00695 PF00156 Phosphoribosyl transferase domain A4U85_00700 PF07715 TonB-dependent Receptor Plug Domain A4U85_00700 PF00593 TonB dependent receptor A4U85_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A4U85_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A4U85_00715 PF04101 Glycosyltransferase family 28 C-terminal domain A4U85_00715 PF03033 Glycosyltransferase family 28 N-terminal domain A4U85_00720 PF01225 Mur ligase family, catalytic domain A4U85_00720 PF02875 Mur ligase family, glutamate ligase domain A4U85_00720 PF08245 Mur ligase middle domain A4U85_00725 PF01820 D-ala D-ala ligase N-terminus A4U85_00725 PF07478 D-ala D-ala ligase C-terminus A4U85_00730 PF08478 POTRA domain, FtsQ-type A4U85_00730 PF03799 Cell division protein FtsQ A4U85_00735 PF02491 SHS2 domain inserted in FTSA A4U85_00740 PF00091 Tubulin/FtsZ family, GTPase domain A4U85_00740 PF12327 FtsZ family, C-terminal domain A4U85_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A4U85_00755 PF01551 Peptidase family M23 A4U85_00760 PF00456 Transketolase, thiamine diphosphate binding domain A4U85_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain A4U85_00765 PF02817 e3 binding domain A4U85_00765 PF00364 Biotin-requiring enzyme A4U85_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4U85_00775 PF01169 Uncharacterized protein family UPF0016 A4U85_00780 PF07715 TonB-dependent Receptor Plug Domain A4U85_00780 PF00593 TonB dependent receptor A4U85_00785 PF01613 Flavin reductase like domain A4U85_00785 PF00258 Flavodoxin A4U85_00790 PF03692 Putative zinc- or iron-chelating domain A4U85_00795 PF00571 CBS domain A4U85_00795 PF00478 IMP dehydrogenase / GMP reductase domain A4U85_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U85_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U85_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U85_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U85_00805 PF01243 Pyridoxamine 5'-phosphate oxidase A4U85_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A4U85_00810 PF01368 DHH family A4U85_00810 PF02272 DHHA1 domain A4U85_00810 PF17768 RecJ OB domain A4U85_00820 PF00472 RF-1 domain A4U85_00820 PF03462 PCRF domain A4U85_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U85_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A4U85_00840 PF04452 RNA methyltransferase A4U85_00845 PF00924 Mechanosensitive ion channel A4U85_00855 PF00501 AMP-binding enzyme A4U85_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus A4U85_00855 PF13193 AMP-binding enzyme C-terminal domain A4U85_00860 PF00857 Isochorismatase family A4U85_00865 PF01037 Lrp/AsnC ligand binding domain A4U85_00870 PF00296 Luciferase-like monooxygenase A4U85_00875 PF03358 NADPH-dependent FMN reductase A4U85_00880 PF00072 Response regulator receiver domain A4U85_00880 PF00196 Bacterial regulatory proteins, luxR family A4U85_00890 PF00672 HAMP domain A4U85_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_00890 PF01627 Hpt domain A4U85_00890 PF00072 Response regulator receiver domain A4U85_00890 PF00512 His Kinase A (phospho-acceptor) domain A4U85_00895 PF04341 Protein of unknown function, DUF485 A4U85_00900 PF00474 Sodium:solute symporter family A4U85_00910 PF02028 BCCT, betaine/carnitine/choline family transporter A4U85_00920 PF00990 Diguanylate cyclase, GGDEF domain A4U85_00920 PF17158 Membrane-associated sensor, integral membrane domain A4U85_00925 PF17760 UvrA interaction domain A4U85_00925 PF17755 UvrA DNA-binding domain A4U85_00925 PF00005 ABC transporter A4U85_00930 PF16925 Tetracyclin repressor-like, C-terminal domain A4U85_00930 PF00440 Bacterial regulatory proteins, tetR family A4U85_00935 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_00935 PF00107 Zinc-binding dehydrogenase A4U85_00945 PF06942 GlpM protein A4U85_00950 PF02581 Thiamine monophosphate synthase A4U85_00950 PF03070 TENA/THI-4/PQQC family A4U85_00950 PF08543 Phosphomethylpyrimidine kinase A4U85_00960 PF07690 Major Facilitator Superfamily A4U85_00965 PF00436 Single-strand binding protein family A4U85_01010 PF03591 AzlC protein A4U85_01020 PF00324 Amino acid permease A4U85_01025 PF00155 Aminotransferase class I and II A4U85_01025 PF00392 Bacterial regulatory proteins, gntR family A4U85_01030 PF00202 Aminotransferase class-III A4U85_01035 PF00171 Aldehyde dehydrogenase family A4U85_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_01045 PF00857 Isochorismatase family A4U85_01050 PF02678 Pirin A4U85_01050 PF05726 Pirin C-terminal cupin domain A4U85_01055 PF01593 Flavin containing amine oxidoreductase A4U85_01075 PF07690 Major Facilitator Superfamily A4U85_01080 PF03466 LysR substrate binding domain A4U85_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_01100 PF00248 Aldo/keto reductase family A4U85_01105 PF12833 Helix-turn-helix domain A4U85_01105 PF02311 AraC-like ligand binding domain A4U85_01130 PF01638 HxlR-like helix-turn-helix A4U85_01135 PF02525 Flavodoxin-like fold A4U85_01160 PF02705 K+ potassium transporter A4U85_01185 PF00230 Major intrinsic protein A4U85_01200 PF00977 Histidine biosynthesis protein A4U85_01205 PF01636 Phosphotransferase enzyme family A4U85_01230 PF00977 Histidine biosynthesis protein A4U85_01245 PF00117 Glutamine amidotransferase class-I A4U85_01250 PF00475 Imidazoleglycerol-phosphate dehydratase A4U85_01270 PF00583 Acetyltransferase (GNAT) family A4U85_01275 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A4U85_01275 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A4U85_01280 PF00512 His Kinase A (phospho-acceptor) domain A4U85_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_01280 PF00672 HAMP domain A4U85_01285 PF00072 Response regulator receiver domain A4U85_01285 PF00486 Transcriptional regulatory protein, C terminal A4U85_01290 PF17674 HHH domain A4U85_01290 PF00575 S1 RNA binding domain A4U85_01290 PF09371 Tex-like protein N-terminal domain A4U85_01290 PF16921 Tex protein YqgF-like domain A4U85_01295 PF01740 STAS domain A4U85_01295 PF00916 Sulfate permease family A4U85_01300 PF00106 short chain dehydrogenase A4U85_01305 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U85_01310 PF12848 ABC transporter A4U85_01310 PF00005 ABC transporter A4U85_01335 PF00529 HlyD membrane-fusion protein of T1SS A4U85_01335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_01340 PF00873 AcrB/AcrD/AcrF family A4U85_01345 PF01545 Cation efflux family A4U85_01375 PF00324 Amino acid permease A4U85_01390 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4U85_01405 PF01795 MraW methylase family A4U85_01415 PF00905 Penicillin binding protein transpeptidase domain A4U85_01415 PF03717 Penicillin-binding Protein dimerisation domain A4U85_01420 PF01225 Mur ligase family, catalytic domain A4U85_01420 PF08245 Mur ligase middle domain A4U85_01420 PF02875 Mur ligase family, glutamate ligase domain A4U85_01425 PF01225 Mur ligase family, catalytic domain A4U85_01425 PF02875 Mur ligase family, glutamate ligase domain A4U85_01425 PF08245 Mur ligase middle domain A4U85_01430 PF00953 Glycosyl transferase family 4 A4U85_01440 PF13847 Methyltransferase domain A4U85_01445 PF00905 Penicillin binding protein transpeptidase domain A4U85_01445 PF00912 Transglycosylase A4U85_01445 PF17092 Penicillin-binding protein OB-like domain A4U85_01470 PF11741 AMIN domain A4U85_01470 PF00263 Bacterial type II and III secretion system protein A4U85_01470 PF03958 Bacterial type II/III secretion system short domain A4U85_01470 PF07660 Secretin and TonB N terminus short domain A4U85_01475 PF01202 Shikimate kinase A4U85_01480 PF01761 3-dehydroquinate synthase A4U85_01490 PF01493 GXGXG motif A4U85_01490 PF00310 Glutamine amidotransferases class-II A4U85_01490 PF04898 Glutamate synthase central domain A4U85_01490 PF01645 Conserved region in glutamate synthase A4U85_01495 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_01495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A4U85_01505 PF04011 LemA family A4U85_01510 PF04536 TPM domain A4U85_01520 PF00114 Pilin (bacterial filament) A4U85_01520 PF07963 Prokaryotic N-terminal methylation motif A4U85_01530 PF15864 Protein glycosylation ligase A4U85_01530 PF04932 O-Antigen ligase A4U85_01530 PF11846 Virulence factor membrane-bound polymerase, C-terminal A4U85_01535 PF00210 Ferritin-like domain A4U85_01540 PF04324 BFD-like [2Fe-2S] binding domain A4U85_01545 PF01042 Endoribonuclease L-PSP A4U85_01550 PF02824 TGS domain A4U85_01550 PF04607 Region found in RelA / SpoT proteins A4U85_01550 PF13291 ACT domain A4U85_01555 PF01192 RNA polymerase Rpb6 A4U85_01560 PF00625 Guanylate kinase A4U85_01565 PF02401 LytB protein A4U85_01605 PF00886 Ribosomal protein S16 A4U85_01610 PF01782 RimM N-terminal domain A4U85_01610 PF05239 PRC-barrel domain A4U85_01615 PF01746 tRNA (Guanine-1)-methyltransferase A4U85_01620 PF01245 Ribosomal protein L19 A4U85_01625 PF00561 alpha/beta hydrolase fold A4U85_01630 PF03280 Proteobacterial lipase chaperone protein A4U85_01635 PF01509 TruB family pseudouridylate synthase (N terminal domain) A4U85_01635 PF16198 tRNA pseudouridylate synthase B C-terminal domain A4U85_01635 PF09157 Pseudouridine synthase II TruB, C-terminal A4U85_01640 PF01925 Sulfite exporter TauE/SafE A4U85_01650 PF00892 EamA-like transporter family A4U85_01655 PF00892 EamA-like transporter family A4U85_01660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U85_01660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U85_01665 PF01565 FAD binding domain A4U85_01665 PF02913 FAD linked oxidases, C-terminal domain A4U85_01675 PF03992 Antibiotic biosynthesis monooxygenase A4U85_01680 PF02525 Flavodoxin-like fold A4U85_01690 PF07690 Major Facilitator Superfamily A4U85_01695 PF12805 FUSC-like inner membrane protein yccS A4U85_01700 PF00080 Copper/zinc superoxide dismutase (SODC) A4U85_01705 PF01594 AI-2E family transporter A4U85_01710 PF13614 AAA domain A4U85_01730 PF08241 Methyltransferase domain A4U85_01740 PF00324 Amino acid permease A4U85_01745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A4U85_01745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4U85_01750 PF00202 Aminotransferase class-III A4U85_01755 PF04958 Arginine N-succinyltransferase beta subunit A4U85_01760 PF00171 Aldehyde dehydrogenase family A4U85_01765 PF04996 Succinylarginine dihydrolase A4U85_01770 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A4U85_01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_01800 PF03466 LysR substrate binding domain A4U85_01805 PF00892 EamA-like transporter family A4U85_01815 PF02092 Glycyl-tRNA synthetase beta subunit A4U85_01815 PF05746 DALR anticodon binding domain A4U85_01820 PF02091 Glycyl-tRNA synthetase alpha subunit A4U85_01825 PF07690 Major Facilitator Superfamily A4U85_01840 PF00571 CBS domain A4U85_01845 PF04024 PspC domain A4U85_01855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_01855 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_01855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_01855 PF12806 Acetyl-CoA dehydrogenase C-terminal like A4U85_01865 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A4U85_01865 PF08501 Shikimate dehydrogenase substrate binding domain A4U85_01865 PF01488 Shikimate / quinate 5-dehydrogenase A4U85_01870 PF01218 Coproporphyrinogen III oxidase A4U85_01875 PF00925 GTP cyclohydrolase II A4U85_01880 PF02780 Transketolase, C-terminal domain A4U85_01880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A4U85_01880 PF02779 Transketolase, pyrimidine binding domain A4U85_01885 PF00459 Inositol monophosphatase family A4U85_01890 PF00270 DEAD/DEAH box helicase A4U85_01890 PF03880 DbpA RNA binding domain A4U85_01890 PF00271 Helicase conserved C-terminal domain A4U85_01890 PF12343 Cold shock protein DEAD box A A4U85_01900 PF00005 ABC transporter A4U85_01905 PF02405 Permease MlaE A4U85_01915 PF05494 MlaC protein A4U85_01925 PF01544 CorA-like Mg2+ transporter protein A4U85_01930 PF03641 Possible lysine decarboxylase A4U85_01935 PF00293 NUDIX domain A4U85_01940 PF00156 Phosphoribosyl transferase domain A4U85_01945 PF17191 RecG wedge domain A4U85_01945 PF00271 Helicase conserved C-terminal domain A4U85_01945 PF00270 DEAD/DEAH box helicase A4U85_01960 PF01553 Acyltransferase A4U85_01970 PF00375 Sodium:dicarboxylate symporter family A4U85_01980 PF01926 50S ribosome-binding GTPase A4U85_01985 PF02082 Transcriptional regulator A4U85_01990 PF00175 Oxidoreductase NAD-binding domain A4U85_01990 PF00042 Globin A4U85_01990 PF00970 Oxidoreductase FAD-binding domain A4U85_01995 PF05872 Bacterial protein of unknown function (DUF853) A4U85_02000 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U85_02005 PF00117 Glutamine amidotransferase class-I A4U85_02010 PF00338 Ribosomal protein S10p/S20e A4U85_02015 PF00297 Ribosomal protein L3 A4U85_02020 PF00573 Ribosomal protein L4/L1 family A4U85_02025 PF00276 Ribosomal protein L23 A4U85_02030 PF00181 Ribosomal Proteins L2, RNA binding domain A4U85_02030 PF03947 Ribosomal Proteins L2, C-terminal domain A4U85_02035 PF00203 Ribosomal protein S19 A4U85_02040 PF00237 Ribosomal protein L22p/L17e A4U85_02045 PF07650 KH domain A4U85_02045 PF00189 Ribosomal protein S3, C-terminal domain A4U85_02050 PF00252 Ribosomal protein L16p/L10e A4U85_02055 PF00831 Ribosomal L29 protein A4U85_02060 PF00366 Ribosomal protein S17 A4U85_02065 PF00238 Ribosomal protein L14p/L23e A4U85_02070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A4U85_02070 PF00467 KOW motif A4U85_02075 PF00673 ribosomal L5P family C-terminus A4U85_02075 PF00281 Ribosomal protein L5 A4U85_02080 PF00253 Ribosomal protein S14p/S29e A4U85_02085 PF00410 Ribosomal protein S8 A4U85_02090 PF00347 Ribosomal protein L6 A4U85_02095 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A4U85_02100 PF00333 Ribosomal protein S5, N-terminal domain A4U85_02100 PF03719 Ribosomal protein S5, C-terminal domain A4U85_02105 PF00327 Ribosomal protein L30p/L7e A4U85_02110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A4U85_02115 PF00344 SecY translocase A4U85_02120 PF00444 Ribosomal protein L36 A4U85_02125 PF00416 Ribosomal protein S13/S18 A4U85_02130 PF00411 Ribosomal protein S11 A4U85_02135 PF01479 S4 domain A4U85_02135 PF00163 Ribosomal protein S4/S9 N-terminal domain A4U85_02140 PF01000 RNA polymerase Rpb3/RpoA insert domain A4U85_02140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A4U85_02140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A4U85_02145 PF01196 Ribosomal protein L17 A4U85_02150 PF00743 Flavin-binding monooxygenase-like A4U85_02155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_02155 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_02155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_02160 PF03937 Flavinator of succinate dehydrogenase A4U85_02190 PF09526 Probable metal-binding protein (DUF2387) A4U85_02195 PF01432 Peptidase family M3 A4U85_02200 PF17876 Cold shock domain A4U85_02200 PF00575 S1 RNA binding domain A4U85_02200 PF00773 RNB domain A4U85_02200 PF08206 Ribonuclease B OB domain A4U85_02200 PF08461 Ribonuclease R winged-helix domain A4U85_02245 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4U85_02250 PF12833 Helix-turn-helix domain A4U85_02255 PF00892 EamA-like transporter family A4U85_02260 PF03631 Virulence factor BrkB A4U85_02265 PF03358 NADPH-dependent FMN reductase A4U85_02290 PF02130 Uncharacterized protein family UPF0054 A4U85_02295 PF02562 PhoH-like protein A4U85_02300 PF04055 Radical SAM superfamily A4U85_02300 PF01938 TRAM domain A4U85_02300 PF00919 Uncharacterized protein family UPF0004 A4U85_02305 PF01464 Transglycosylase SLT domain A4U85_02305 PF01551 Peptidase family M23 A4U85_02305 PF10145 Phage-related minor tail protein A4U85_02315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A4U85_02315 PF00056 lactate/malate dehydrogenase, NAD binding domain A4U85_02335 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A4U85_02340 PF01066 CDP-alcohol phosphatidyltransferase A4U85_02385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_02385 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_02385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_02390 PF17932 Tetracyclin repressor-like, C-terminal domain A4U85_02390 PF00440 Bacterial regulatory proteins, tetR family A4U85_02405 PF01039 Carboxyl transferase domain A4U85_02410 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_02415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U85_02415 PF00378 Enoyl-CoA hydratase/isomerase A4U85_02415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U85_02420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U85_02420 PF02785 Biotin carboxylase C-terminal domain A4U85_02420 PF00364 Biotin-requiring enzyme A4U85_02420 PF00289 Biotin carboxylase, N-terminal domain A4U85_02430 PF04386 Stringent starvation protein B A4U85_02435 PF13417 Glutathione S-transferase, N-terminal domain A4U85_02435 PF00043 Glutathione S-transferase, C-terminal domain A4U85_02440 PF00380 Ribosomal protein S9/S16 A4U85_02445 PF00572 Ribosomal protein L13 A4U85_02450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A4U85_02455 PF00398 Ribosomal RNA adenine dimethylase A4U85_02460 PF00149 Calcineurin-like phosphoesterase A4U85_02480 PF01926 50S ribosome-binding GTPase A4U85_02480 PF16360 GTP-binding GTPase Middle Region A4U85_02480 PF13167 GTP-binding GTPase N-terminal A4U85_02490 PF13091 PLD-like domain A4U85_02495 PF10518 TAT (twin-arginine translocation) pathway signal sequence A4U85_02495 PF00149 Calcineurin-like phosphoesterase A4U85_02500 PF00691 OmpA family A4U85_02500 PF01389 OmpA-like transmembrane domain A4U85_02505 PF17152 Periplasmic sensor domain A4U85_02505 PF00990 Diguanylate cyclase, GGDEF domain A4U85_02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_02540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U85_02550 PF04273 Putative phosphatase (DUF442) A4U85_02550 PF00753 Metallo-beta-lactamase superfamily A4U85_02555 PF00561 alpha/beta hydrolase fold A4U85_02560 PF00085 Thioredoxin A4U85_02565 PF03061 Thioesterase superfamily A4U85_02575 PF04461 Protein of unknown function (DUF520) A4U85_02585 PF01266 FAD dependent oxidoreductase A4U85_02585 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A4U85_02595 PF03795 YCII-related domain A4U85_02600 PF04279 Intracellular septation protein A A4U85_02605 PF02811 PHP domain A4U85_02610 PF01062 Bestrophin, RFP-TM, chloride channel A4U85_02615 PF04002 RadC-like JAB domain A4U85_02620 PF02441 Flavoprotein A4U85_02620 PF04127 DNA / pantothenate metabolism flavoprotein A4U85_02625 PF02355 Protein export membrane protein A4U85_02625 PF07549 SecD/SecF GG Motif A4U85_02630 PF02355 Protein export membrane protein A4U85_02630 PF13721 SecD export protein N-terminal TM region A4U85_02630 PF07549 SecD/SecF GG Motif A4U85_02635 PF02699 Preprotein translocase subunit A4U85_02640 PF01702 Queuine tRNA-ribosyltransferase A4U85_02660 PF02547 Queuosine biosynthesis protein A4U85_02670 PF00512 His Kinase A (phospho-acceptor) domain A4U85_02670 PF07689 KaiB domain A4U85_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_02675 PF08335 GlnD PII-uridylyltransferase A4U85_02675 PF03710 Glutamate-ammonia ligase adenylyltransferase A4U85_02680 PF01063 Amino-transferase class IV A4U85_02695 PF01522 Polysaccharide deacetylase A4U85_02700 PF00535 Glycosyl transferase family 2 A4U85_02705 PF13439 Glycosyltransferase Family 4 A4U85_02705 PF00534 Glycosyl transferases group 1 A4U85_02730 PF11380 Stealth protein CR2, conserved region 2 A4U85_02730 PF17101 Stealth protein CR1, conserved region 1 A4U85_02730 PF17102 Stealth protein CR3, conserved region 3 A4U85_02735 PF01336 OB-fold nucleic acid binding domain A4U85_02735 PF02938 GAD domain A4U85_02735 PF00152 tRNA synthetases class II (D, K and N) A4U85_02745 PF07715 TonB-dependent Receptor Plug Domain A4U85_02745 PF00593 TonB dependent receptor A4U85_02765 PF06146 Phosphate-starvation-inducible E A4U85_02770 PF02798 Glutathione S-transferase, N-terminal domain A4U85_02770 PF00043 Glutathione S-transferase, C-terminal domain A4U85_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_02775 PF03466 LysR substrate binding domain A4U85_02780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_02780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_02780 PF12806 Acetyl-CoA dehydrogenase C-terminal like A4U85_02780 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_02785 PF12806 Acetyl-CoA dehydrogenase C-terminal like A4U85_02785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_02785 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_02785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_02795 PF00512 His Kinase A (phospho-acceptor) domain A4U85_02795 PF00672 HAMP domain A4U85_02800 PF00486 Transcriptional regulatory protein, C terminal A4U85_02800 PF00072 Response regulator receiver domain A4U85_02805 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A4U85_02825 PF01923 Cobalamin adenosyltransferase A4U85_02830 PF07715 TonB-dependent Receptor Plug Domain A4U85_02830 PF00593 TonB dependent receptor A4U85_02835 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A4U85_02840 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_02865 PF00290 Tryptophan synthase alpha chain A4U85_02870 PF01039 Carboxyl transferase domain A4U85_02875 PF08245 Mur ligase middle domain A4U85_02875 PF02875 Mur ligase family, glutamate ligase domain A4U85_02890 PF00753 Metallo-beta-lactamase superfamily A4U85_02895 PF10417 C-terminal domain of 1-Cys peroxiredoxin A4U85_02895 PF00578 AhpC/TSA family A4U85_02900 PF07516 SecA Wing and Scaffold domain A4U85_02900 PF02810 SEC-C motif A4U85_02900 PF01043 SecA preprotein cross-linking domain A4U85_02900 PF07517 SecA DEAD-like domain A4U85_02910 PF07690 Major Facilitator Superfamily A4U85_02910 PF00083 Sugar (and other) transporter A4U85_02915 PF03006 Haemolysin-III related A4U85_02940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U85_02940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U85_02940 PF00378 Enoyl-CoA hydratase/isomerase A4U85_02945 PF02803 Thiolase, C-terminal domain A4U85_02945 PF00108 Thiolase, N-terminal domain A4U85_02950 PF12833 Helix-turn-helix domain A4U85_02950 PF02311 AraC-like ligand binding domain A4U85_02955 PF02515 CoA-transferase family III A4U85_02960 PF04966 Carbohydrate-selective porin, OprB family A4U85_02965 PF01011 PQQ enzyme repeat A4U85_02970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A4U85_02970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A4U85_02980 PF00893 Small Multidrug Resistance protein A4U85_02990 PF00108 Thiolase, N-terminal domain A4U85_02990 PF02803 Thiolase, C-terminal domain A4U85_03000 PF00691 OmpA family A4U85_03000 PF13505 Outer membrane protein beta-barrel domain A4U85_03010 PF01139 tRNA-splicing ligase RtcB A4U85_03015 PF00324 Amino acid permease A4U85_03020 PF05175 Methyltransferase small domain A4U85_03020 PF08468 Methyltransferase small domain N-terminal A4U85_03025 PF00860 Permease family A4U85_03035 PF01741 Large-conductance mechanosensitive channel, MscL A4U85_03050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A4U85_03050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A4U85_03050 PF06827 Zinc finger found in FPG and IleRS A4U85_03055 PF02245 Methylpurine-DNA glycosylase (MPG) A4U85_03060 PF00593 TonB dependent receptor A4U85_03060 PF07715 TonB-dependent Receptor Plug Domain A4U85_03065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U85_03080 PF10411 Disulfide bond isomerase protein N-terminus A4U85_03080 PF13098 Thioredoxin-like domain A4U85_03085 PF01571 Aminomethyltransferase folate-binding domain A4U85_03095 PF04343 Protein of unknown function, DUF488 A4U85_03100 PF08274 PhnA Zinc-Ribbon A4U85_03100 PF03831 PhnA domain A4U85_03105 PF07411 Domain of unknown function (DUF1508) A4U85_03110 PF04073 Aminoacyl-tRNA editing domain A4U85_03110 PF03129 Anticodon binding domain A4U85_03110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4U85_03115 PF00873 AcrB/AcrD/AcrF family A4U85_03130 PF00072 Response regulator receiver domain A4U85_03135 PF00072 Response regulator receiver domain A4U85_03140 PF01584 CheW-like domain A4U85_03145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A4U85_03145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A4U85_03150 PF00072 Response regulator receiver domain A4U85_03150 PF01627 Hpt domain A4U85_03150 PF01584 CheW-like domain A4U85_03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_03160 PF01546 Peptidase family M20/M25/M40 A4U85_03160 PF07687 Peptidase dimerisation domain A4U85_03165 PF08085 Entericidin EcnA/B family A4U85_03175 PF04304 Protein of unknown function (DUF454) A4U85_03180 PF03734 L,D-transpeptidase catalytic domain A4U85_03180 PF17969 L,D-transpeptidase C-terminal domain A4U85_03220 PF00175 Oxidoreductase NAD-binding domain A4U85_03220 PF00258 Flavodoxin A4U85_03220 PF00667 FAD binding domain A4U85_03230 PF12805 FUSC-like inner membrane protein yccS A4U85_03235 PF07690 Major Facilitator Superfamily A4U85_03240 PF00881 Nitroreductase family A4U85_03250 PF01235 Sodium:alanine symporter family A4U85_03255 PF01734 Patatin-like phospholipase A4U85_03260 PF13291 ACT domain A4U85_03260 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_03265 PF05992 SbmA/BacA-like family A4U85_03290 PF02934 GatB/GatE catalytic domain A4U85_03290 PF02637 GatB domain A4U85_03295 PF01425 Amidase A4U85_03300 PF02686 Glu-tRNAGln amidotransferase C subunit A4U85_03310 PF04085 rod shape-determining protein MreC A4U85_03315 PF04093 rod shape-determining protein MreD A4U85_03320 PF02545 Maf-like protein A4U85_03325 PF10150 Ribonuclease E/G family A4U85_03325 PF00575 S1 RNA binding domain A4U85_03335 PF06974 Protein of unknown function (DUF1298) A4U85_03335 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain A4U85_03340 PF01507 Phosphoadenosine phosphosulfate reductase family A4U85_03355 PF02525 Flavodoxin-like fold A4U85_03375 PF02673 Bacitracin resistance protein BacA A4U85_03380 PF06719 AraC-type transcriptional regulator N-terminus A4U85_03380 PF12833 Helix-turn-helix domain A4U85_03385 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U85_03385 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U85_03385 PF14765 Polyketide synthase dehydratase A4U85_03385 PF09277 Erythronolide synthase, docking A4U85_03385 PF00550 Phosphopantetheine attachment site A4U85_03385 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_03385 PF08659 KR domain A4U85_03385 PF00698 Acyl transferase domain A4U85_03385 PF08990 Erythronolide synthase docking A4U85_03385 PF16197 Ketoacyl-synthetase C-terminal extension A4U85_03390 PF01965 DJ-1/PfpI family A4U85_03400 PF00324 Amino acid permease A4U85_03405 PF04303 PrpF protein A4U85_03410 PF00348 Polyprenyl synthetase A4U85_03415 PF04237 YjbR A4U85_03420 PF01145 SPFH domain / Band 7 family A4U85_03430 PF01734 Patatin-like phospholipase A4U85_03450 PF08019 Phosphoethanolamine transferase EptA/EptB A4U85_03450 PF00884 Sulfatase A4U85_03455 PF00486 Transcriptional regulatory protein, C terminal A4U85_03455 PF00072 Response regulator receiver domain A4U85_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_03460 PF08521 Two-component sensor kinase N-terminal A4U85_03460 PF00512 His Kinase A (phospho-acceptor) domain A4U85_03470 PF00909 Ammonium Transporter Family A4U85_03475 PF03466 LysR substrate binding domain A4U85_03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_03495 PF08264 Anticodon-binding domain of tRNA A4U85_03495 PF10458 Valyl tRNA synthetase tRNA binding arm A4U85_03495 PF00133 tRNA synthetases class I (I, L, M and V) A4U85_03515 PF01906 Putative heavy-metal-binding A4U85_03520 PF01906 Putative heavy-metal-binding A4U85_03525 PF02321 Outer membrane efflux protein A4U85_03530 PF00873 AcrB/AcrD/AcrF family A4U85_03535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_03535 PF00529 HlyD membrane-fusion protein of T1SS A4U85_03540 PF01569 PAP2 superfamily A4U85_03550 PF00348 Polyprenyl synthetase A4U85_03560 PF00829 Ribosomal prokaryotic L21 protein A4U85_03565 PF01016 Ribosomal L27 protein A4U85_03570 PF03548 Outer membrane lipoprotein carrier protein LolA A4U85_03580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4U85_03580 PF02403 Seryl-tRNA synthetase N-terminal domain A4U85_03585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A4U85_03585 PF10414 Sirohaem synthase dimerisation region A4U85_03585 PF14824 Sirohaem biosynthesis protein central A4U85_03590 PF00588 SpoU rRNA Methylase family A4U85_03600 PF03358 NADPH-dependent FMN reductase A4U85_03605 PF13520 Amino acid permease A4U85_03610 PF00465 Iron-containing alcohol dehydrogenase A4U85_03620 PF03099 Biotin/lipoate A/B protein ligase family A4U85_03625 PF04359 Protein of unknown function (DUF493) A4U85_03630 PF04545 Sigma-70, region 4 A4U85_03630 PF04539 Sigma-70 region 3 A4U85_03630 PF04542 Sigma-70 region 2 A4U85_03630 PF03979 Sigma-70 factor, region 1.1 A4U85_03630 PF04546 Sigma-70, non-essential region A4U85_03630 PF00140 Sigma-70 factor, region 1.2 A4U85_03655 PF00285 Citrate synthase, C-terminal domain A4U85_03660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A4U85_03665 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A4U85_03670 PF00890 FAD binding domain A4U85_03670 PF02910 Fumarate reductase flavoprotein C-term A4U85_03675 PF13085 2Fe-2S iron-sulfur cluster binding domain A4U85_03680 PF16870 2-oxoglutarate dehydrogenase C-terminal A4U85_03680 PF00676 Dehydrogenase E1 component A4U85_03680 PF16078 2-oxoglutarate dehydrogenase N-terminus A4U85_03680 PF02779 Transketolase, pyrimidine binding domain A4U85_03685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4U85_03685 PF00364 Biotin-requiring enzyme A4U85_03685 PF02817 e3 binding domain A4U85_03690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U85_03690 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_03695 PF08442 ATP-grasp domain A4U85_03695 PF00549 CoA-ligase A4U85_03700 PF02629 CoA binding domain A4U85_03700 PF00549 CoA-ligase A4U85_03705 PF00579 tRNA synthetases class I (W and Y) A4U85_03710 PF05661 Protein of unknown function (DUF808) A4U85_03715 PF04228 Putative neutral zinc metallopeptidase A4U85_03720 PF00999 Sodium/hydrogen exchanger family A4U85_03735 PF09587 Bacterial capsule synthesis protein PGA_cap A4U85_03745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4U85_03750 PF00582 Universal stress protein family A4U85_03755 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_03760 PF03449 Transcription elongation factor, N-terminal A4U85_03760 PF01272 Transcription elongation factor, GreA/GreB, C-term A4U85_03765 PF02142 MGS-like domain A4U85_03765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U85_03765 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4U85_03770 PF00117 Glutamine amidotransferase class-I A4U85_03770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A4U85_03785 PF01985 CRS1 / YhbY (CRM) domain A4U85_03790 PF01728 FtsJ-like methyltransferase A4U85_03795 PF06480 FtsH Extracellular A4U85_03795 PF17862 AAA+ lid domain A4U85_03795 PF01434 Peptidase family M41 A4U85_03795 PF00004 ATPase family associated with various cellular activities (AAA) A4U85_03800 PF00809 Pterin binding enzyme A4U85_03820 PF09423 PhoD-like phosphatase A4U85_03820 PF16655 PhoD-like phosphatase, N-terminal domain A4U85_03835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A4U85_03835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A4U85_03850 PF00083 Sugar (and other) transporter A4U85_03855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4U85_03855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4U85_03860 PF01266 FAD dependent oxidoreductase A4U85_03860 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A4U85_03865 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain A4U85_03865 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain A4U85_03870 PF00781 Diacylglycerol kinase catalytic domain A4U85_03875 PF00149 Calcineurin-like phosphoesterase A4U85_03885 PF00166 Chaperonin 10 Kd subunit A4U85_03890 PF00118 TCP-1/cpn60 chaperonin family A4U85_03895 PF01219 Prokaryotic diacylglycerol kinase A4U85_03900 PF00753 Metallo-beta-lactamase superfamily A4U85_03905 PF03009 Glycerophosphoryl diester phosphodiesterase family A4U85_03910 PF00873 AcrB/AcrD/AcrF family A4U85_03920 PF01435 Peptidase family M48 A4U85_03925 PF01464 Transglycosylase SLT domain A4U85_03930 PF01171 PP-loop family A4U85_03940 PF01464 Transglycosylase SLT domain A4U85_03940 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U85_03945 PF01272 Transcription elongation factor, GreA/GreB, C-term A4U85_03945 PF03449 Transcription elongation factor, N-terminal A4U85_03960 PF00501 AMP-binding enzyme A4U85_03960 PF13193 AMP-binding enzyme C-terminal domain A4U85_03960 PF00975 Thioesterase domain A4U85_03960 PF00668 Condensation domain A4U85_03960 PF00550 Phosphopantetheine attachment site A4U85_03990 PF00881 Nitroreductase family A4U85_04005 PF02595 Glycerate kinase family A4U85_04010 PF00384 Molybdopterin oxidoreductase A4U85_04015 PF02634 FdhD/NarQ family A4U85_04020 PF06803 Protein of unknown function (DUF1232) A4U85_04025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U85_04025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U85_04025 PF11890 Domain of unknown function (DUF3410) A4U85_04030 PF00152 tRNA synthetases class II (D, K and N) A4U85_04040 PF18073 Rubredoxin metal binding domain A4U85_04045 PF00324 Amino acid permease A4U85_04055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A4U85_04055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A4U85_04060 PF01678 Diaminopimelate epimerase A4U85_04065 PF03747 ADP-ribosylglycohydrolase A4U85_04070 PF00561 alpha/beta hydrolase fold A4U85_04075 PF01810 LysE type translocator A4U85_04080 PF00589 Phage integrase family A4U85_04080 PF02899 Phage integrase, N-terminal SAM-like domain A4U85_04085 PF01012 Electron transfer flavoprotein domain A4U85_04090 PF01012 Electron transfer flavoprotein domain A4U85_04090 PF00766 Electron transfer flavoprotein FAD-binding domain A4U85_04095 PF03989 DNA gyrase C-terminal domain, beta-propeller A4U85_04095 PF00521 DNA gyrase/topoisomerase IV, subunit A A4U85_04110 PF00535 Glycosyl transferase family 2 A4U85_04130 PF13533 Biotin-lipoyl like A4U85_04140 PF00266 Aminotransferase class-V A4U85_04150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A4U85_04160 PF12704 MacB-like periplasmic core domain A4U85_04160 PF02687 FtsX-like permease family A4U85_04165 PF00005 ABC transporter A4U85_04170 PF03772 Competence protein A4U85_04170 PF13567 Domain of unknown function (DUF4131) A4U85_04170 PF00753 Metallo-beta-lactamase superfamily A4U85_04180 PF06965 Na+/H+ antiporter 1 A4U85_04180 PF01343 Peptidase family S49 A4U85_04185 PF12697 Alpha/beta hydrolase family A4U85_04190 PF00551 Formyl transferase A4U85_04195 PF00586 AIR synthase related protein, N-terminal domain A4U85_04195 PF02769 AIR synthase related protein, C-terminal domain A4U85_04200 PF01594 AI-2E family transporter A4U85_04205 PF00308 Bacterial dnaA protein A4U85_04205 PF08299 Bacterial dnaA protein helix-turn-helix A4U85_04205 PF11638 DnaA N-terminal domain A4U85_04235 PF00588 SpoU rRNA Methylase family A4U85_04235 PF08032 RNA 2'-O ribose methyltransferase substrate binding A4U85_04240 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A4U85_04250 PF00691 OmpA family A4U85_04255 PF07676 WD40-like Beta Propeller Repeat A4U85_04255 PF04052 TolB amino-terminal domain A4U85_04265 PF02472 Biopolymer transport protein ExbD/TolR A4U85_04270 PF01618 MotA/TolQ/ExbB proton channel family A4U85_04275 PF03061 Thioesterase superfamily A4U85_04280 PF01546 Peptidase family M20/M25/M40 A4U85_04280 PF07687 Peptidase dimerisation domain A4U85_04285 PF05496 Holliday junction DNA helicase RuvB P-loop domain A4U85_04285 PF05491 RuvB C-terminal winged helix domain A4U85_04285 PF17864 RuvB AAA lid domain A4U85_04290 PF01330 RuvA N terminal domain A4U85_04290 PF07499 RuvA, C-terminal domain A4U85_04295 PF01966 HD domain A4U85_04300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A4U85_04300 PF02769 AIR synthase related protein, C-terminal domain A4U85_04300 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A4U85_04305 PF07690 Major Facilitator Superfamily A4U85_04315 PF01784 NIF3 (NGG1p interacting factor 3) A4U85_04320 PF00378 Enoyl-CoA hydratase/isomerase A4U85_04325 PF01467 Cytidylyltransferase-like A4U85_04325 PF00293 NUDIX domain A4U85_04335 PF00578 AhpC/TSA family A4U85_04350 PF06508 Queuosine biosynthesis protein QueC A4U85_04360 PF14602 Hexapeptide repeat of succinyl-transferase A4U85_04360 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_04360 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A4U85_04370 PF03466 LysR substrate binding domain A4U85_04370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_04375 PF12857 TOBE-like domain A4U85_04375 PF00005 ABC transporter A4U85_04380 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_04385 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_04400 PF01063 Amino-transferase class IV A4U85_04405 PF02618 YceG-like family A4U85_04410 PF02223 Thymidylate kinase A4U85_04420 PF00890 FAD binding domain A4U85_04420 PF02910 Fumarate reductase flavoprotein C-term A4U85_04425 PF13180 PDZ domain A4U85_04435 PF00009 Elongation factor Tu GTP binding domain A4U85_04435 PF03144 Elongation factor Tu domain 2 A4U85_04435 PF06421 GTP-binding protein LepA C-terminus A4U85_04435 PF00679 Elongation factor G C-terminus A4U85_04440 PF10502 Signal peptidase, peptidase S26 A4U85_04450 PF00035 Double-stranded RNA binding motif A4U85_04450 PF14622 Ribonuclease-III-like A4U85_04455 PF07650 KH domain A4U85_04455 PF01926 50S ribosome-binding GTPase A4U85_04465 PF11967 Recombination protein O N terminal A4U85_04465 PF02565 Recombination protein O C terminal A4U85_04470 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A4U85_04475 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A4U85_04480 PF00106 short chain dehydrogenase A4U85_04505 PF00012 Hsp70 protein A4U85_04525 PF00990 Diguanylate cyclase, GGDEF domain A4U85_04525 PF17151 Periplasmic sensor domain A4U85_04535 PF17757 UvrB interaction domain A4U85_04535 PF12344 Ultra-violet resistance protein B A4U85_04535 PF02151 UvrB/uvrC motif A4U85_04535 PF04851 Type III restriction enzyme, res subunit A4U85_04535 PF00271 Helicase conserved C-terminal domain A4U85_04545 PF00892 EamA-like transporter family A4U85_04550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U85_04550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A4U85_04565 PF01018 GTP1/OBG A4U85_04565 PF01926 50S ribosome-binding GTPase A4U85_04570 PF01472 PUA domain A4U85_04570 PF00696 Amino acid kinase family A4U85_04580 PF07759 Protein of unknown function (DUF1615) A4U85_04585 PF01207 Dihydrouridine synthase (Dus) A4U85_04590 PF03060 Nitronate monooxygenase A4U85_04605 PF02350 UDP-N-acetylglucosamine 2-epimerase A4U85_04635 PF03441 FAD binding domain of DNA photolyase A4U85_04635 PF00875 DNA photolyase A4U85_04640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U85_04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_04650 PF00768 D-alanyl-D-alanine carboxypeptidase A4U85_04650 PF07943 Penicillin-binding protein 5, C-terminal domain A4U85_04660 PF03971 Monomeric isocitrate dehydrogenase A4U85_04665 PF00849 RNA pseudouridylate synthase A4U85_04670 PF00180 Isocitrate/isopropylmalate dehydrogenase A4U85_04685 PF06779 Uncharacterised MFS-type transporter YbfB A4U85_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_04690 PF03466 LysR substrate binding domain A4U85_04700 PF02567 Phenazine biosynthesis-like protein A4U85_04705 PF00675 Insulinase (Peptidase family M16) A4U85_04705 PF05193 Peptidase M16 inactive domain A4U85_04730 PF02581 Thiamine monophosphate synthase A4U85_04735 PF00202 Aminotransferase class-III A4U85_04745 PF00849 RNA pseudouridylate synthase A4U85_04750 PF12137 RNA polymerase recycling family C-terminal A4U85_04750 PF18337 RapA N-terminal Tudor like domain A4U85_04750 PF00271 Helicase conserved C-terminal domain A4U85_04750 PF00176 SNF2 family N-terminal domain A4U85_04750 PF18339 RapA N-terminal Tudor like domain 1 A4U85_04760 PF00440 Bacterial regulatory proteins, tetR family A4U85_04765 PF00970 Oxidoreductase FAD-binding domain A4U85_04765 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_04765 PF00175 Oxidoreductase NAD-binding domain A4U85_04770 PF00487 Fatty acid desaturase A4U85_04775 PF02525 Flavodoxin-like fold A4U85_04790 PF00202 Aminotransferase class-III A4U85_04795 PF00282 Pyridoxal-dependent decarboxylase conserved domain A4U85_04800 PF00171 Aldehyde dehydrogenase family A4U85_04805 PF01037 Lrp/AsnC ligand binding domain A4U85_04810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U85_04810 PF00205 Thiamine pyrophosphate enzyme, central domain A4U85_04810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U85_04815 PF00324 Amino acid permease A4U85_04820 PF12849 PBP superfamily domain A4U85_04825 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_04830 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_04835 PF00005 ABC transporter A4U85_04840 PF08496 Peptidase family S49 N-terminal A4U85_04840 PF01343 Peptidase family S49 A4U85_04855 PF00206 Lyase A4U85_04855 PF08328 Adenylosuccinate lyase C-terminal A4U85_04860 PF04356 Protein of unknown function (DUF489) A4U85_04870 PF00293 NUDIX domain A4U85_04870 PF13344 Haloacid dehalogenase-like hydrolase A4U85_04875 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_04880 PF07943 Penicillin-binding protein 5, C-terminal domain A4U85_04880 PF00768 D-alanyl-D-alanine carboxypeptidase A4U85_04895 PF01975 Survival protein SurE A4U85_04900 PF01551 Peptidase family M23 A4U85_04900 PF01476 LysM domain A4U85_04905 PF03466 LysR substrate binding domain A4U85_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_04910 PF13654 AAA domain A4U85_04910 PF05362 Lon protease (S16) C-terminal proteolytic domain A4U85_04915 PF07690 Major Facilitator Superfamily A4U85_04920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U85_04925 PF13593 SBF-like CPA transporter family (DUF4137) A4U85_04930 PF01197 Ribosomal protein L31 A4U85_04935 PF00563 EAL domain A4U85_04935 PF12792 CSS motif domain associated with EAL A4U85_04945 PF04055 Radical SAM superfamily A4U85_04950 PF01132 Elongation factor P (EF-P) OB domain A4U85_04950 PF08207 Elongation factor P (EF-P) KOW-like domain A4U85_04950 PF09285 Elongation factor P, C-terminal A4U85_04955 PF13722 5TM C-terminal transporter carbon starvation CstA A4U85_04955 PF02554 Carbon starvation protein CstA A4U85_04960 PF04328 Selenoprotein, putative A4U85_04990 PF02678 Pirin A4U85_04990 PF17954 Quercetinase C-terminal cupin domain A4U85_04995 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_05000 PF08348 YheO-like PAS domain A4U85_05000 PF13309 HTH domain A4U85_05010 PF13193 AMP-binding enzyme C-terminal domain A4U85_05010 PF00501 AMP-binding enzyme A4U85_05010 PF00550 Phosphopantetheine attachment site A4U85_05010 PF00668 Condensation domain A4U85_05015 PF00550 Phosphopantetheine attachment site A4U85_05015 PF00668 Condensation domain A4U85_05015 PF00501 AMP-binding enzyme A4U85_05015 PF13193 AMP-binding enzyme C-terminal domain A4U85_05015 PF00975 Thioesterase domain A4U85_05020 PF01032 FecCD transport family A4U85_05025 PF01032 FecCD transport family A4U85_05030 PF00005 ABC transporter A4U85_05035 PF01497 Periplasmic binding protein A4U85_05040 PF07715 TonB-dependent Receptor Plug Domain A4U85_05040 PF00593 TonB dependent receptor A4U85_05045 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) A4U85_05050 PF00550 Phosphopantetheine attachment site A4U85_05050 PF00501 AMP-binding enzyme A4U85_05050 PF00668 Condensation domain A4U85_05055 PF13193 AMP-binding enzyme C-terminal domain A4U85_05055 PF00501 AMP-binding enzyme A4U85_05060 PF00857 Isochorismatase family A4U85_05060 PF00550 Phosphopantetheine attachment site A4U85_05065 PF00282 Pyridoxal-dependent decarboxylase conserved domain A4U85_05075 PF00005 ABC transporter A4U85_05075 PF00664 ABC transporter transmembrane region A4U85_05080 PF00005 ABC transporter A4U85_05080 PF00664 ABC transporter transmembrane region A4U85_05085 PF00975 Thioesterase domain A4U85_05095 PF00425 chorismate binding enzyme A4U85_05105 PF01208 Uroporphyrinogen decarboxylase (URO-D) A4U85_05110 PF05675 Protein of unknown function (DUF817) A4U85_05125 PF00144 Beta-lactamase A4U85_05135 PF01799 [2Fe-2S] binding domain A4U85_05135 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_05140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A4U85_05140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A4U85_05155 PF00218 Indole-3-glycerol phosphate synthase A4U85_05160 PF02885 Glycosyl transferase family, helical bundle domain A4U85_05160 PF00591 Glycosyl transferase family, a/b domain A4U85_05165 PF07715 TonB-dependent Receptor Plug Domain A4U85_05165 PF00593 TonB dependent receptor A4U85_05170 PF01433 Peptidase family M1 domain A4U85_05170 PF11838 ERAP1-like C-terminal domain A4U85_05175 PF00117 Glutamine amidotransferase class-I A4U85_05185 PF00854 POT family A4U85_05195 PF04345 Chorismate lyase A4U85_05200 PF01040 UbiA prenyltransferase family A4U85_05235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A4U85_05235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A4U85_05240 PF01784 NIF3 (NGG1p interacting factor 3) A4U85_05245 PF13180 PDZ domain A4U85_05250 PF12627 Probable RNA and SrmB- binding site of polymerase A A4U85_05250 PF01743 Poly A polymerase head domain A4U85_05255 PF01515 Phosphate acetyl/butaryl transferase A4U85_05255 PF00390 Malic enzyme, N-terminal domain A4U85_05255 PF03949 Malic enzyme, NAD binding domain A4U85_05260 PF00563 EAL domain A4U85_05260 PF03707 Bacterial signalling protein N terminal repeat A4U85_05260 PF00990 Diguanylate cyclase, GGDEF domain A4U85_05265 PF04452 RNA methyltransferase A4U85_05270 PF02219 Methylenetetrahydrofolate reductase A4U85_05275 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A4U85_05275 PF05221 S-adenosyl-L-homocysteine hydrolase A4U85_05290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_05290 PF09317 Domain of unknown function (DUF1974) A4U85_05290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_05295 PF04055 Radical SAM superfamily A4U85_05300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U85_05300 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_05315 PF07690 Major Facilitator Superfamily A4U85_05325 PF00557 Metallopeptidase family M24 A4U85_05330 PF00318 Ribosomal protein S2 A4U85_05335 PF00889 Elongation factor TS A4U85_05345 PF12833 Helix-turn-helix domain A4U85_05365 PF05036 Sporulation related domain A4U85_05365 PF03330 Lytic transglycolase A4U85_05370 PF13406 Transglycosylase SLT domain A4U85_05375 PF01098 Cell cycle protein A4U85_05385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A4U85_05385 PF14489 QueF-like protein A4U85_05390 PF01061 ABC-2 type transporter A4U85_05395 PF00005 ABC transporter A4U85_05400 PF00589 Phage integrase family A4U85_05405 PF10548 P22AR C-terminal domain A4U85_05405 PF02498 BRO family, N-terminal domain A4U85_05435 PF12684 PDDEXK-like domain of unknown function (DUF3799) A4U85_05435 PF06630 Enterobacterial exodeoxyribonuclease VIII A4U85_05510 PF03796 DnaB-like helicase C terminal domain A4U85_05510 PF00772 DnaB-like helicase N terminal domain A4U85_05510 PF14528 LAGLIDADG-like domain A4U85_05780 PF00464 Serine hydroxymethyltransferase A4U85_05785 PF02321 Outer membrane efflux protein A4U85_05790 PF00873 AcrB/AcrD/AcrF family A4U85_05795 PF13533 Biotin-lipoyl like A4U85_05800 PF03466 LysR substrate binding domain A4U85_05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_05805 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U85_05810 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_05815 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_05820 PF00005 ABC transporter A4U85_05825 PF00893 Small Multidrug Resistance protein A4U85_05830 PF00037 4Fe-4S binding domain A4U85_05840 PF00392 Bacterial regulatory proteins, gntR family A4U85_05840 PF00155 Aminotransferase class I and II A4U85_05845 PF02567 Phenazine biosynthesis-like protein A4U85_05850 PF00175 Oxidoreductase NAD-binding domain A4U85_05850 PF00970 Oxidoreductase FAD-binding domain A4U85_05855 PF01980 tRNA-methyltransferase O A4U85_05855 PF18389 TrmO C-terminal domain A4U85_05865 PF00437 Type II/IV secretion system protein A4U85_05870 PF04076 Bacterial OB fold (BOF) protein A4U85_05875 PF00486 Transcriptional regulatory protein, C terminal A4U85_05875 PF00072 Response regulator receiver domain A4U85_05880 PF00512 His Kinase A (phospho-acceptor) domain A4U85_05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_05880 PF08521 Two-component sensor kinase N-terminal A4U85_05890 PF00293 NUDIX domain A4U85_05900 PF00912 Transglycosylase A4U85_05900 PF14814 Bifunctional transglycosylase second domain A4U85_05900 PF00905 Penicillin binding protein transpeptidase domain A4U85_05905 PF01513 ATP-NAD kinase A4U85_05910 PF07023 Protein of unknown function (DUF1315) A4U85_05915 PF00591 Glycosyl transferase family, a/b domain A4U85_05915 PF02885 Glycosyl transferase family, helical bundle domain A4U85_05920 PF00375 Sodium:dicarboxylate symporter family A4U85_05925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_05925 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_05925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_05930 PF00756 Putative esterase A4U85_05935 PF01842 ACT domain A4U85_05935 PF00800 Prephenate dehydratase A4U85_05935 PF01817 Chorismate mutase type II A4U85_05940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A4U85_05950 PF01546 Peptidase family M20/M25/M40 A4U85_05950 PF07687 Peptidase dimerisation domain A4U85_05955 PF00753 Metallo-beta-lactamase superfamily A4U85_05965 PF03883 Peroxide stress protein YaaA A4U85_05975 PF05690 Thiazole biosynthesis protein ThiG A4U85_05985 PF04241 Protein of unknown function (DUF423) A4U85_05990 PF04542 Sigma-70 region 2 A4U85_05990 PF00140 Sigma-70 factor, region 1.2 A4U85_05990 PF04545 Sigma-70, region 4 A4U85_06000 PF00313 'Cold-shock' DNA-binding domain A4U85_06005 PF00271 Helicase conserved C-terminal domain A4U85_06005 PF00270 DEAD/DEAH box helicase A4U85_06015 PF00881 Nitroreductase family A4U85_06020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A4U85_06020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A4U85_06040 PF01180 Dihydroorotate dehydrogenase A4U85_06045 PF02674 Colicin V production protein A4U85_06050 PF00156 Phosphoribosyl transferase domain A4U85_06065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4U85_06065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4U85_06070 PF01435 Peptidase family M48 A4U85_06075 PF09424 Yqey-like protein A4U85_06080 PF01165 Ribosomal protein S21 A4U85_06085 PF00814 Glycoprotease family A4U85_06105 PF00069 Protein kinase domain A4U85_06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_06130 PF03466 LysR substrate binding domain A4U85_06135 PF00202 Aminotransferase class-III A4U85_06140 PF00171 Aldehyde dehydrogenase family A4U85_06145 PF00324 Amino acid permease A4U85_06175 PF04076 Bacterial OB fold (BOF) protein A4U85_06200 PF00561 alpha/beta hydrolase fold A4U85_06205 PF03616 Sodium/glutamate symporter A4U85_06215 PF07729 FCD domain A4U85_06215 PF00392 Bacterial regulatory proteins, gntR family A4U85_06270 PF00083 Sugar (and other) transporter A4U85_06270 PF08946 Osmosensory transporter coiled coil A4U85_06275 PF00293 NUDIX domain A4U85_06305 PF04403 Paraquat-inducible protein A A4U85_06310 PF02470 MlaD protein A4U85_06320 PF00576 HIUase/Transthyretin family A4U85_06330 PF00486 Transcriptional regulatory protein, C terminal A4U85_06330 PF00072 Response regulator receiver domain A4U85_06335 PF00672 HAMP domain A4U85_06335 PF00512 His Kinase A (phospho-acceptor) domain A4U85_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_06375 PF00512 His Kinase A (phospho-acceptor) domain A4U85_06375 PF08521 Two-component sensor kinase N-terminal A4U85_06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_06380 PF00072 Response regulator receiver domain A4U85_06380 PF00486 Transcriptional regulatory protein, C terminal A4U85_06400 PF01177 Asp/Glu/Hydantoin racemase A4U85_06405 PF00892 EamA-like transporter family A4U85_06410 PF07995 Glucose / Sorbosone dehydrogenase A4U85_06430 PF00375 Sodium:dicarboxylate symporter family A4U85_06440 PF00753 Metallo-beta-lactamase superfamily A4U85_06440 PF16123 Hydroxyacylglutathione hydrolase C-terminus A4U85_06445 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_06450 PF09383 NIL domain A4U85_06450 PF00005 ABC transporter A4U85_06455 PF03180 NLPA lipoprotein A4U85_06460 PF02844 Phosphoribosylglycinamide synthetase, N domain A4U85_06460 PF02843 Phosphoribosylglycinamide synthetase, C domain A4U85_06460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A4U85_06465 PF01808 AICARFT/IMPCHase bienzyme A4U85_06465 PF02142 MGS-like domain A4U85_06470 PF02954 Bacterial regulatory protein, Fis family A4U85_06490 PF01134 Glucose inhibited division protein A A4U85_06490 PF13932 GidA associated domain A4U85_06500 PF14403 Circularly permuted ATP-grasp type 2 A4U85_06510 PF01841 Transglutaminase-like superfamily A4U85_06510 PF08379 Bacterial transglutaminase-like N-terminal region A4U85_06520 PF00842 Alanine racemase, C-terminal domain A4U85_06520 PF01168 Alanine racemase, N-terminal domain A4U85_06525 PF00772 DnaB-like helicase N terminal domain A4U85_06525 PF03796 DnaB-like helicase C terminal domain A4U85_06530 PF01281 Ribosomal protein L9, N-terminal domain A4U85_06530 PF03948 Ribosomal protein L9, C-terminal domain A4U85_06535 PF01084 Ribosomal protein S18 A4U85_06540 PF01250 Ribosomal protein S6 A4U85_06545 PF01040 UbiA prenyltransferase family A4U85_06550 PF03626 Prokaryotic Cytochrome C oxidase subunit IV A4U85_06555 PF00510 Cytochrome c oxidase subunit III A4U85_06560 PF00115 Cytochrome C and Quinol oxidase polypeptide I A4U85_06565 PF06481 COX Aromatic Rich Motif A4U85_06565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A4U85_06575 PF00391 PEP-utilising enzyme, mobile domain A4U85_06575 PF02896 PEP-utilising enzyme, TIM barrel domain A4U85_06575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A4U85_06580 PF03618 Kinase/pyrophosphorylase A4U85_06590 PF01522 Polysaccharide deacetylase A4U85_06590 PF14883 Hypothetical glycosyl hydrolase family 13 A4U85_06595 PF00535 Glycosyl transferase family 2 A4U85_06600 PF13994 PgaD-like protein A4U85_06610 PF00296 Luciferase-like monooxygenase A4U85_06630 PF03466 LysR substrate binding domain A4U85_06630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_06640 PF03462 PCRF domain A4U85_06640 PF00472 RF-1 domain A4U85_06645 PF13847 Methyltransferase domain A4U85_06645 PF17827 PrmC N-terminal domain A4U85_06650 PF12833 Helix-turn-helix domain A4U85_06655 PF00106 short chain dehydrogenase A4U85_06665 PF13193 AMP-binding enzyme C-terminal domain A4U85_06665 PF00501 AMP-binding enzyme A4U85_06670 PF01613 Flavin reductase like domain A4U85_06675 PF00899 ThiF family A4U85_06680 PF03109 ABC1 family A4U85_06695 PF03814 Potassium-transporting ATPase A subunit A4U85_06705 PF02669 K+-transporting ATPase, c chain A4U85_06710 PF00512 His Kinase A (phospho-acceptor) domain A4U85_06710 PF02702 Osmosensitive K+ channel His kinase sensor domain A4U85_06710 PF13493 Domain of unknown function (DUF4118) A4U85_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_06715 PF00072 Response regulator receiver domain A4U85_06715 PF00486 Transcriptional regulatory protein, C terminal A4U85_06720 PF00120 Glutamine synthetase, catalytic domain A4U85_06730 PF03232 Ubiquinone biosynthesis protein COQ7 A4U85_06735 PF07690 Major Facilitator Superfamily A4U85_06740 PF07244 Surface antigen variable number repeat A4U85_06740 PF01103 Surface antigen A4U85_06740 PF17243 POTRA domain TamA domain 1 A4U85_06755 PF06434 Aconitate hydratase 2 N-terminus A4U85_06755 PF00330 Aconitase family (aconitate hydratase) A4U85_06755 PF11791 Aconitate B N-terminal domain A4U85_06765 PF00027 Cyclic nucleotide-binding domain A4U85_06765 PF00520 Ion transport protein A4U85_06770 PF07690 Major Facilitator Superfamily A4U85_06785 PF03466 LysR substrate binding domain A4U85_06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_06790 PF04284 Protein of unknown function (DUF441) A4U85_06800 PF01479 S4 domain A4U85_06800 PF00849 RNA pseudouridylate synthase A4U85_06815 PF01479 S4 domain A4U85_06815 PF00849 RNA pseudouridylate synthase A4U85_06820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A4U85_06825 PF08676 MutL C terminal dimerisation domain A4U85_06825 PF01119 DNA mismatch repair protein, C-terminal domain A4U85_06835 PF17209 Hfq protein A4U85_06845 PF00881 Nitroreductase family A4U85_06855 PF00149 Calcineurin-like phosphoesterase A4U85_06860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A4U85_06865 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A4U85_06865 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4U85_06870 PF00117 Glutamine amidotransferase class-I A4U85_06870 PF00958 GMP synthase C terminal domain A4U85_06870 PF02540 NAD synthase A4U85_06875 PF05985 Ethanolamine ammonia-lyase light chain (EutC) A4U85_06880 PF06751 Ethanolamine ammonia lyase large subunit (EutB) A4U85_06885 PF13520 Amino acid permease A4U85_06890 PF00171 Aldehyde dehydrogenase family A4U85_06905 PF00465 Iron-containing alcohol dehydrogenase A4U85_06910 PF05970 PIF1-like helicase A4U85_06910 PF14493 Helix-turn-helix domain A4U85_06920 PF02110 Hydroxyethylthiazole kinase family A4U85_06935 PF11940 Domain of unknown function (DUF3458) Ig-like fold A4U85_06935 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A4U85_06935 PF01433 Peptidase family M1 domain A4U85_06950 PF13953 PapC C-terminal domain A4U85_06950 PF13954 PapC N-terminal domain A4U85_06950 PF00577 Outer membrane usher protein A4U85_06975 PF01817 Chorismate mutase type II A4U85_06980 PF01037 Lrp/AsnC ligand binding domain A4U85_06990 PF00440 Bacterial regulatory proteins, tetR family A4U85_06995 PF07715 TonB-dependent Receptor Plug Domain A4U85_06995 PF00593 TonB dependent receptor A4U85_07000 PF00924 Mechanosensitive ion channel A4U85_07030 PF00593 TonB dependent receptor A4U85_07030 PF07715 TonB-dependent Receptor Plug Domain A4U85_07050 PF00005 ABC transporter A4U85_07050 PF12848 ABC transporter A4U85_07055 PF00582 Universal stress protein family A4U85_07075 PF00689 Cation transporting ATPase, C-terminus A4U85_07075 PF00690 Cation transporter/ATPase, N-terminus A4U85_07080 PF02308 MgtC family A4U85_07085 PF03594 Benzoate membrane transport protein A4U85_07090 PF01037 Lrp/AsnC ligand binding domain A4U85_07095 PF01810 LysE type translocator A4U85_07105 PF03466 LysR substrate binding domain A4U85_07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_07115 PF00108 Thiolase, N-terminal domain A4U85_07115 PF02803 Thiolase, C-terminal domain A4U85_07140 PF07690 Major Facilitator Superfamily A4U85_07145 PF12169 DNA polymerase III subunits gamma and tau domain III A4U85_07145 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A4U85_07145 PF12170 DNA polymerase III tau subunit V interacting with alpha A4U85_07150 PF04185 Phosphoesterase family A4U85_07150 PF05506 Domain of unknown function (DUF756) A4U85_07155 PF03061 Thioesterase superfamily A4U85_07160 PF00465 Iron-containing alcohol dehydrogenase A4U85_07170 PF01451 Low molecular weight phosphotyrosine protein phosphatase A4U85_07175 PF01565 FAD binding domain A4U85_07175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A4U85_07190 PF01645 Conserved region in glutamate synthase A4U85_07210 PF12832 MFS_1 like family A4U85_07220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U85_07220 PF00289 Biotin carboxylase, N-terminal domain A4U85_07220 PF02785 Biotin carboxylase C-terminal domain A4U85_07225 PF00364 Biotin-requiring enzyme A4U85_07230 PF01220 Dehydroquinase class II A4U85_07235 PF13438 Domain of unknown function (DUF4113) A4U85_07235 PF00817 impB/mucB/samB family A4U85_07235 PF11799 impB/mucB/samB family C-terminal domain A4U85_07240 PF00005 ABC transporter A4U85_07245 PF00072 Response regulator receiver domain A4U85_07245 PF00486 Transcriptional regulatory protein, C terminal A4U85_07255 PF18267 Rubredoxin NAD+ reductase C-terminal domain A4U85_07255 PF13806 Rieske-like [2Fe-2S] domain A4U85_07255 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_07255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A4U85_07255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A4U85_07255 PF04324 BFD-like [2Fe-2S] binding domain A4U85_07260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A4U85_07260 PF04324 BFD-like [2Fe-2S] binding domain A4U85_07260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A4U85_07260 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_07260 PF18267 Rubredoxin NAD+ reductase C-terminal domain A4U85_07265 PF04324 BFD-like [2Fe-2S] binding domain A4U85_07265 PF00384 Molybdopterin oxidoreductase A4U85_07265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A4U85_07265 PF01568 Molydopterin dinucleotide binding domain A4U85_07270 PF12804 MobA-like NTP transferase domain A4U85_07280 PF06463 Molybdenum Cofactor Synthesis C A4U85_07280 PF04055 Radical SAM superfamily A4U85_07290 PF02391 MoaE protein A4U85_07295 PF00994 Probable molybdopterin binding domain A4U85_07295 PF01967 MoaC family A4U85_07300 PF03454 MoeA C-terminal region (domain IV) A4U85_07300 PF03453 MoeA N-terminal region (domain I and II) A4U85_07300 PF00994 Probable molybdopterin binding domain A4U85_07305 PF01638 HxlR-like helix-turn-helix A4U85_07310 PF00155 Aminotransferase class I and II A4U85_07310 PF00392 Bacterial regulatory proteins, gntR family A4U85_07315 PF00892 EamA-like transporter family A4U85_07335 PF02635 DsrE/DsrF-like family A4U85_07340 PF16363 GDP-mannose 4,6 dehydratase A4U85_07345 PF00206 Lyase A4U85_07345 PF10415 Fumarase C C-terminus A4U85_07365 PF01266 FAD dependent oxidoreductase A4U85_07375 PF02542 YgbB family A4U85_07385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A4U85_07385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A4U85_07390 PF00440 Bacterial regulatory proteins, tetR family A4U85_07395 PF00158 Sigma-54 interaction domain A4U85_07395 PF00072 Response regulator receiver domain A4U85_07395 PF02954 Bacterial regulatory protein, Fis family A4U85_07400 PF00989 PAS fold A4U85_07400 PF00512 His Kinase A (phospho-acceptor) domain A4U85_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_07405 PF18693 TRAM domain A4U85_07405 PF04055 Radical SAM superfamily A4U85_07405 PF00919 Uncharacterized protein family UPF0004 A4U85_07410 PF00696 Amino acid kinase family A4U85_07415 PF01765 Ribosome recycling factor A4U85_07420 PF01255 Putative undecaprenyl diphosphate synthase A4U85_07430 PF13288 DXP reductoisomerase C-terminal domain A4U85_07430 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A4U85_07430 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A4U85_07435 PF17820 PDZ domain A4U85_07435 PF13180 PDZ domain A4U85_07435 PF02163 Peptidase family M50 A4U85_07440 PF07244 Surface antigen variable number repeat A4U85_07440 PF01103 Surface antigen A4U85_07450 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A4U85_07450 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_07455 PF07977 FabA-like domain A4U85_07460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A4U85_07460 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_07475 PF02631 RecX family A4U85_07480 PF00154 recA bacterial DNA recombination protein A4U85_07485 PF01479 S4 domain A4U85_07490 PF13419 Haloacid dehalogenase-like hydrolase A4U85_07515 PF01037 Lrp/AsnC ligand binding domain A4U85_07520 PF00266 Aminotransferase class-V A4U85_07525 PF00324 Amino acid permease A4U85_07535 PF05922 Peptidase inhibitor I9 A4U85_07535 PF00082 Subtilase family A4U85_07540 PF00916 Sulfate permease family A4U85_07540 PF01740 STAS domain A4U85_07545 PF02586 SOS response associated peptidase (SRAP) A4U85_07550 PF07995 Glucose / Sorbosone dehydrogenase A4U85_07560 PF00563 EAL domain A4U85_07560 PF00990 Diguanylate cyclase, GGDEF domain A4U85_07560 PF03707 Bacterial signalling protein N terminal repeat A4U85_07580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A4U85_07580 PF02378 Phosphotransferase system, EIIC A4U85_07585 PF00294 pfkB family carbohydrate kinase A4U85_07590 PF05524 PEP-utilising enzyme, N-terminal A4U85_07590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A4U85_07590 PF00381 PTS HPr component phosphorylation site A4U85_07590 PF02896 PEP-utilising enzyme, TIM barrel domain A4U85_07590 PF00391 PEP-utilising enzyme, mobile domain A4U85_07615 PF05525 Branched-chain amino acid transport protein A4U85_07620 PF00557 Metallopeptidase family M24 A4U85_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_07625 PF03466 LysR substrate binding domain A4U85_07635 PF00462 Glutaredoxin A4U85_07640 PF00202 Aminotransferase class-III A4U85_07645 PF00478 IMP dehydrogenase / GMP reductase domain A4U85_07645 PF00571 CBS domain A4U85_07670 PF00448 SRP54-type protein, GTPase domain A4U85_07670 PF02881 SRP54-type protein, helical bundle domain A4U85_07680 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A4U85_07690 PF08173 Membrane bound YbgT-like protein A4U85_07695 PF02322 Cytochrome bd terminal oxidase subunit II A4U85_07700 PF01654 Cytochrome bd terminal oxidase subunit I A4U85_07710 PF07290 Protein of unknown function (DUF1449) A4U85_07720 PF00294 pfkB family carbohydrate kinase A4U85_07725 PF07715 TonB-dependent Receptor Plug Domain A4U85_07725 PF00593 TonB dependent receptor A4U85_07730 PF08367 Peptidase M16C associated A4U85_07730 PF05193 Peptidase M16 inactive domain A4U85_07730 PF00675 Insulinase (Peptidase family M16) A4U85_07735 PF02253 Phospholipase A1 A4U85_07740 PF02386 Cation transport protein A4U85_07745 PF02254 TrkA-N domain A4U85_07745 PF02080 TrkA-C domain A4U85_07750 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_07750 PF00585 C-terminal regulatory domain of Threonine dehydratase A4U85_07755 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A4U85_07770 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4U85_07770 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4U85_07780 PF02617 ATP-dependent Clp protease adaptor protein ClpS A4U85_07785 PF00004 ATPase family associated with various cellular activities (AAA) A4U85_07785 PF07724 AAA domain (Cdc48 subfamily) A4U85_07785 PF17871 AAA lid domain A4U85_07785 PF02861 Clp amino terminal domain, pathogenicity island component A4U85_07785 PF10431 C-terminal, D2-small domain, of ClpB protein A4U85_07790 PF02694 Uncharacterised BCR, YnfA/UPF0060 family A4U85_07795 PF00793 DAHP synthetase I family A4U85_07810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U85_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_07840 PF00117 Glutamine amidotransferase class-I A4U85_07840 PF06418 CTP synthase N-terminus A4U85_07845 PF00793 DAHP synthetase I family A4U85_07850 PF03952 Enolase, N-terminal domain A4U85_07850 PF00113 Enolase, C-terminal TIM barrel domain A4U85_07855 PF04239 Protein of unknown function (DUF421) A4U85_07860 PF04977 Septum formation initiator A4U85_07865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A4U85_07870 PF01144 Coenzyme A transferase A4U85_07875 PF01144 Coenzyme A transferase A4U85_07880 PF00108 Thiolase, N-terminal domain A4U85_07880 PF02803 Thiolase, C-terminal domain A4U85_07885 PF10397 Adenylosuccinate lyase C-terminus A4U85_07885 PF00206 Lyase A4U85_07890 PF00561 alpha/beta hydrolase fold A4U85_07895 PF07690 Major Facilitator Superfamily A4U85_07900 PF02627 Carboxymuconolactone decarboxylase family A4U85_07905 PF00775 Dioxygenase A4U85_07905 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal A4U85_07910 PF00775 Dioxygenase A4U85_07915 PF01487 Type I 3-dehydroquinase A4U85_07920 PF05048 Periplasmic copper-binding protein (NosD) A4U85_07925 PF04966 Carbohydrate-selective porin, OprB family A4U85_07930 PF01011 PQQ enzyme repeat A4U85_07930 PF13360 PQQ-like domain A4U85_07940 PF04143 Sulphur transport A4U85_07950 PF00753 Metallo-beta-lactamase superfamily A4U85_07955 PF09339 IclR helix-turn-helix domain A4U85_07955 PF01614 Bacterial transcriptional regulator A4U85_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_07960 PF03466 LysR substrate binding domain A4U85_07965 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_07965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_07980 PF00106 short chain dehydrogenase A4U85_07990 PF07690 Major Facilitator Superfamily A4U85_08000 PF01425 Amidase A4U85_08005 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A4U85_08020 PF00355 Rieske [2Fe-2S] domain A4U85_08020 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A4U85_08035 PF00175 Oxidoreductase NAD-binding domain A4U85_08035 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_08040 PF01613 Flavin reductase like domain A4U85_08045 PF02311 AraC-like ligand binding domain A4U85_08045 PF12833 Helix-turn-helix domain A4U85_08050 PF07833 Copper amine oxidase N-terminal domain A4U85_08050 PF02728 Copper amine oxidase, N3 domain A4U85_08050 PF02727 Copper amine oxidase, N2 domain A4U85_08050 PF01179 Copper amine oxidase, enzyme domain A4U85_08060 PF00171 Aldehyde dehydrogenase family A4U85_08070 PF12146 Serine aminopeptidase, S33 A4U85_08075 PF00108 Thiolase, N-terminal domain A4U85_08075 PF02803 Thiolase, C-terminal domain A4U85_08080 PF01144 Coenzyme A transferase A4U85_08085 PF01144 Coenzyme A transferase A4U85_08090 PF04444 Catechol dioxygenase N terminus A4U85_08090 PF00775 Dioxygenase A4U85_08095 PF02426 Muconolactone delta-isomerase A4U85_08100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A4U85_08100 PF13378 Enolase C-terminal domain-like A4U85_08105 PF03466 LysR substrate binding domain A4U85_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08115 PF07729 FCD domain A4U85_08115 PF00392 Bacterial regulatory proteins, gntR family A4U85_08120 PF00920 Dehydratase family A4U85_08125 PF07690 Major Facilitator Superfamily A4U85_08135 PF00171 Aldehyde dehydrogenase family A4U85_08145 PF00561 alpha/beta hydrolase fold A4U85_08150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U85_08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_08165 PF13411 MerR HTH family regulatory protein A4U85_08175 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_08185 PF12706 Beta-lactamase superfamily domain A4U85_08190 PF00440 Bacterial regulatory proteins, tetR family A4U85_08190 PF08359 YsiA-like protein, C-terminal region A4U85_08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08195 PF03466 LysR substrate binding domain A4U85_08210 PF00106 short chain dehydrogenase A4U85_08215 PF01575 MaoC like domain A4U85_08220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_08220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_08220 PF12806 Acetyl-CoA dehydrogenase C-terminal like A4U85_08220 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_08230 PF13193 AMP-binding enzyme C-terminal domain A4U85_08230 PF00501 AMP-binding enzyme A4U85_08245 PF17287 POTRA domain A4U85_08245 PF08479 POTRA domain, ShlB-type A4U85_08245 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB A4U85_08250 PF13332 Hemagglutinin repeat A4U85_08250 PF13018 Extended Signal Peptide of Type V secretion system A4U85_08250 PF04829 Pre-toxin domain with VENN motif A4U85_08250 PF05860 haemagglutination activity domain A4U85_08270 PF07690 Major Facilitator Superfamily A4U85_08275 PF04909 Amidohydrolase A4U85_08290 PF08450 SMP-30/Gluconolactonase/LRE-like region A4U85_08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08300 PF03466 LysR substrate binding domain A4U85_08315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_08315 PF00529 HlyD membrane-fusion protein of T1SS A4U85_08330 PF00171 Aldehyde dehydrogenase family A4U85_08335 PF00920 Dehydratase family A4U85_08345 PF03466 LysR substrate binding domain A4U85_08345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08350 PF01370 NAD dependent epimerase/dehydratase family A4U85_08355 PF07690 Major Facilitator Superfamily A4U85_08360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A4U85_08360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A4U85_08365 PF12833 Helix-turn-helix domain A4U85_08365 PF06719 AraC-type transcriptional regulator N-terminus A4U85_08380 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_08380 PF00107 Zinc-binding dehydrogenase A4U85_08395 PF00005 ABC transporter A4U85_08415 PF14572 Phosphoribosyl synthetase-associated domain A4U85_08415 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A4U85_08420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A4U85_08460 PF07728 AAA domain (dynein-related subfamily) A4U85_08465 PF01381 Helix-turn-helix A4U85_08465 PF00145 C-5 cytosine-specific DNA methylase A4U85_08470 PF03852 DNA mismatch endonuclease Vsr A4U85_08495 PF01425 Amidase A4U85_08500 PF13533 Biotin-lipoyl like A4U85_08505 PF07690 Major Facilitator Superfamily A4U85_08530 PF01975 Survival protein SurE A4U85_08540 PF13291 ACT domain A4U85_08540 PF02824 TGS domain A4U85_08540 PF04607 Region found in RelA / SpoT proteins A4U85_08565 PF13673 Acetyltransferase (GNAT) domain A4U85_08575 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family A4U85_08600 PF12146 Serine aminopeptidase, S33 A4U85_08605 PF02311 AraC-like ligand binding domain A4U85_08605 PF12833 Helix-turn-helix domain A4U85_08615 PF16527 Two-component sensor protein CpxA, periplasmic domain A4U85_08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_08615 PF00512 His Kinase A (phospho-acceptor) domain A4U85_08615 PF00672 HAMP domain A4U85_08620 PF00072 Response regulator receiver domain A4U85_08620 PF00486 Transcriptional regulatory protein, C terminal A4U85_08625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_08625 PF00529 HlyD membrane-fusion protein of T1SS A4U85_08630 PF00873 AcrB/AcrD/AcrF family A4U85_08635 PF17760 UvrA interaction domain A4U85_08635 PF17755 UvrA DNA-binding domain A4U85_08635 PF00005 ABC transporter A4U85_08650 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U85_08650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U85_08655 PF00577 Outer membrane usher protein A4U85_08655 PF13954 PapC N-terminal domain A4U85_08655 PF13953 PapC C-terminal domain A4U85_08670 PF00107 Zinc-binding dehydrogenase A4U85_08670 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_08680 PF00199 Catalase A4U85_08695 PF13091 PLD-like domain A4U85_08715 PF01244 Membrane dipeptidase (Peptidase family M19) A4U85_08720 PF13186 Iron-sulfur cluster-binding domain A4U85_08720 PF04055 Radical SAM superfamily A4U85_08725 PF05402 Coenzyme PQQ synthesis protein D (PqqD) A4U85_08730 PF03070 TENA/THI-4/PQQC family A4U85_08735 PF12706 Beta-lactamase superfamily domain A4U85_08740 PF02503 Polyphosphate kinase middle domain A4U85_08740 PF13090 Polyphosphate kinase C-terminal domain 2 A4U85_08740 PF13089 Polyphosphate kinase N-terminal domain A4U85_08740 PF17941 Polyphosphate kinase C-terminal domain 1 A4U85_08745 PF00149 Calcineurin-like phosphoesterase A4U85_08755 PF00857 Isochorismatase family A4U85_08755 PF00550 Phosphopantetheine attachment site A4U85_08760 PF00106 short chain dehydrogenase A4U85_08765 PF00005 ABC transporter A4U85_08765 PF03459 TOBE domain A4U85_08770 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_08780 PF03459 TOBE domain A4U85_08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A4U85_08785 PF00355 Rieske [2Fe-2S] domain A4U85_08790 PF00866 Ring hydroxylating beta subunit A4U85_08795 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_08795 PF00175 Oxidoreductase NAD-binding domain A4U85_08795 PF00970 Oxidoreductase FAD-binding domain A4U85_08800 PF14525 AraC-binding-like domain A4U85_08800 PF12833 Helix-turn-helix domain A4U85_08810 PF01613 Flavin reductase like domain A4U85_08825 PF01738 Dienelactone hydrolase family A4U85_08830 PF07690 Major Facilitator Superfamily A4U85_08835 PF12833 Helix-turn-helix domain A4U85_08835 PF06719 AraC-type transcriptional regulator N-terminus A4U85_08855 PF00440 Bacterial regulatory proteins, tetR family A4U85_08875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08875 PF03466 LysR substrate binding domain A4U85_08880 PF01144 Coenzyme A transferase A4U85_08885 PF01144 Coenzyme A transferase A4U85_08890 PF02667 Short chain fatty acid transporter A4U85_08895 PF00108 Thiolase, N-terminal domain A4U85_08895 PF02803 Thiolase, C-terminal domain A4U85_08900 PF03466 LysR substrate binding domain A4U85_08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08905 PF03466 LysR substrate binding domain A4U85_08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_08920 PF00206 Lyase A4U85_08920 PF10415 Fumarase C C-terminus A4U85_08925 PF00593 TonB dependent receptor A4U85_08925 PF07715 TonB-dependent Receptor Plug Domain A4U85_08930 PF00083 Sugar (and other) transporter A4U85_08945 PF00005 ABC transporter A4U85_08950 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_08955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A4U85_08980 PF02525 Flavodoxin-like fold A4U85_08985 PF01638 HxlR-like helix-turn-helix A4U85_08990 PF06445 GyrI-like small molecule binding domain A4U85_08990 PF12833 Helix-turn-helix domain A4U85_09005 PF01925 Sulfite exporter TauE/SafE A4U85_09010 PF00753 Metallo-beta-lactamase superfamily A4U85_09010 PF04273 Putative phosphatase (DUF442) A4U85_09015 PF04273 Putative phosphatase (DUF442) A4U85_09015 PF00753 Metallo-beta-lactamase superfamily A4U85_09020 PF02954 Bacterial regulatory protein, Fis family A4U85_09020 PF00072 Response regulator receiver domain A4U85_09020 PF00158 Sigma-54 interaction domain A4U85_09025 PF01062 Bestrophin, RFP-TM, chloride channel A4U85_09030 PF00107 Zinc-binding dehydrogenase A4U85_09030 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_09035 PF00106 short chain dehydrogenase A4U85_09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_09040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U85_09045 PF02817 e3 binding domain A4U85_09045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4U85_09045 PF00364 Biotin-requiring enzyme A4U85_09050 PF02780 Transketolase, C-terminal domain A4U85_09050 PF02779 Transketolase, pyrimidine binding domain A4U85_09055 PF00676 Dehydrogenase E1 component A4U85_09060 PF04055 Radical SAM superfamily A4U85_09075 PF08448 PAS fold A4U85_09075 PF00990 Diguanylate cyclase, GGDEF domain A4U85_09080 PF01264 Chorismate synthase A4U85_09085 PF05175 Methyltransferase small domain A4U85_09095 PF13662 Toprim domain A4U85_09095 PF02132 RecR protein A4U85_09100 PF02575 YbaB/EbfC DNA-binding family A4U85_09110 PF01053 Cys/Met metabolism PLP-dependent enzyme A4U85_09115 PF00561 alpha/beta hydrolase fold A4U85_09120 PF08241 Methyltransferase domain A4U85_09150 PF01230 HIT domain A4U85_09185 PF00005 ABC transporter A4U85_09190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_09200 PF02684 Lipid-A-disaccharide synthetase A4U85_09205 PF07715 TonB-dependent Receptor Plug Domain A4U85_09205 PF00593 TonB dependent receptor A4U85_09225 PF01925 Sulfite exporter TauE/SafE A4U85_09230 PF00793 DAHP synthetase I family A4U85_09235 PF02654 Cobalamin-5-phosphate synthase A4U85_09245 PF00300 Histidine phosphatase superfamily (branch 1) A4U85_09250 PF02277 Phosphoribosyltransferase A4U85_09255 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A4U85_09265 PF13419 Haloacid dehalogenase-like hydrolase A4U85_09290 PF07715 TonB-dependent Receptor Plug Domain A4U85_09290 PF00593 TonB dependent receptor A4U85_09295 PF03737 Aldolase/RraA A4U85_09305 PF06276 Ferric iron reductase FhuF-like transporter A4U85_09305 PF04183 IucA / IucC family A4U85_09310 PF04183 IucA / IucC family A4U85_09310 PF06276 Ferric iron reductase FhuF-like transporter A4U85_09315 PF07690 Major Facilitator Superfamily A4U85_09320 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) A4U85_09325 PF04183 IucA / IucC family A4U85_09325 PF06276 Ferric iron reductase FhuF-like transporter A4U85_09330 PF04073 Aminoacyl-tRNA editing domain A4U85_09340 PF03109 ABC1 family A4U85_09345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_09345 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_09345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_09350 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_09350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_09350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_09355 PF00487 Fatty acid desaturase A4U85_09360 PF12833 Helix-turn-helix domain A4U85_09360 PF12852 Cupin A4U85_09365 PF00639 PPIC-type PPIASE domain A4U85_09365 PF09312 SurA N-terminal domain A4U85_09370 PF00216 Bacterial DNA-binding protein A4U85_09385 PF02082 Transcriptional regulator A4U85_09390 PF00266 Aminotransferase class-V A4U85_09395 PF01592 NifU-like N terminal domain A4U85_09400 PF01521 Iron-sulphur cluster biosynthesis A4U85_09405 PF00226 DnaJ domain A4U85_09405 PF07743 HSCB C-terminal oligomerisation domain A4U85_09410 PF00012 Hsp70 protein A4U85_09415 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_09420 PF00211 Adenylate and Guanylate cyclase catalytic domain A4U85_09430 PF03461 TRCF domain A4U85_09430 PF00271 Helicase conserved C-terminal domain A4U85_09430 PF00270 DEAD/DEAH box helicase A4U85_09430 PF02559 CarD-like/TRCF domain A4U85_09430 PF17757 UvrB interaction domain A4U85_09450 PF03737 Aldolase/RraA A4U85_09455 PF13460 NAD(P)H-binding A4U85_09460 PF01649 Ribosomal protein S20 A4U85_09470 PF00459 Inositol monophosphatase family A4U85_09485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U85_09485 PF00005 ABC transporter A4U85_09490 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_09495 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_09500 PF01432 Peptidase family M3 A4U85_09515 PF00593 TonB dependent receptor A4U85_09515 PF07715 TonB-dependent Receptor Plug Domain A4U85_09525 PF01618 MotA/TolQ/ExbB proton channel family A4U85_09530 PF02472 Biopolymer transport protein ExbD/TolR A4U85_09535 PF02472 Biopolymer transport protein ExbD/TolR A4U85_09545 PF01274 Malate synthase A4U85_09550 PF03969 AFG1-like ATPase A4U85_09560 PF00743 Flavin-binding monooxygenase-like A4U85_09570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A4U85_09580 PF00216 Bacterial DNA-binding protein A4U85_09585 PF00575 S1 RNA binding domain A4U85_09590 PF02224 Cytidylate kinase A4U85_09600 PF14437 MafB19-like deaminase A4U85_09610 PF03167 Uracil DNA glycosylase superfamily A4U85_09620 PF03934 Type II secretion system (T2SS), protein K A4U85_09625 PF11612 Type II secretion system (T2SS), protein J A4U85_09625 PF07963 Prokaryotic N-terminal methylation motif A4U85_09630 PF02501 Type II secretion system (T2SS), protein I A4U85_09630 PF07963 Prokaryotic N-terminal methylation motif A4U85_09645 PF01026 TatD related DNase A4U85_09655 PF09115 DNA polymerase III, delta subunit, C terminal A4U85_09660 PF02348 Cytidylyltransferase A4U85_09665 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A4U85_09670 PF00005 ABC transporter A4U85_09670 PF00664 ABC transporter transmembrane region A4U85_09680 PF01618 MotA/TolQ/ExbB proton channel family A4U85_09685 PF17762 HTH domain found in ParB protein A4U85_09685 PF02195 ParB-like nuclease domain A4U85_09690 PF13614 AAA domain A4U85_09695 PF02527 rRNA small subunit methyltransferase G A4U85_09700 PF00483 Nucleotidyl transferase A4U85_09705 PF01636 Phosphotransferase enzyme family A4U85_09710 PF03968 OstA-like protein A4U85_09710 PF04453 LPS transport system D A4U85_09715 PF09312 SurA N-terminal domain A4U85_09715 PF00639 PPIC-type PPIASE domain A4U85_09720 PF01116 Fructose-bisphosphate aldolase class-II A4U85_09730 PF00162 Phosphoglycerate kinase A4U85_09740 PF02545 Maf-like protein A4U85_09745 PF08007 Cupin superfamily protein A4U85_09760 PF00375 Sodium:dicarboxylate symporter family A4U85_09765 PF06912 Protein of unknown function (DUF1275) A4U85_09770 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) A4U85_09775 PF00664 ABC transporter transmembrane region A4U85_09775 PF00005 ABC transporter A4U85_09785 PF12833 Helix-turn-helix domain A4U85_09785 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A4U85_09790 PF01597 Glycine cleavage H-protein A4U85_09795 PF02146 Sir2 family A4U85_09800 PF00474 Sodium:solute symporter family A4U85_09805 PF01037 Lrp/AsnC ligand binding domain A4U85_09810 PF14850 DNA-binding domain of Proline dehydrogenase A4U85_09810 PF01619 Proline dehydrogenase A4U85_09810 PF00171 Aldehyde dehydrogenase family A4U85_09810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A4U85_09815 PF04229 GrpB protein A4U85_09820 PF05958 tRNA (Uracil-5-)-methyltransferase A4U85_09830 PF09992 Phosphodiester glycosidase A4U85_09840 PF04264 YceI-like domain A4U85_09850 PF02779 Transketolase, pyrimidine binding domain A4U85_09850 PF02780 Transketolase, C-terminal domain A4U85_09850 PF00456 Transketolase, thiamine diphosphate binding domain A4U85_09855 PF02773 S-adenosylmethionine synthetase, C-terminal domain A4U85_09855 PF00438 S-adenosylmethionine synthetase, N-terminal domain A4U85_09855 PF02772 S-adenosylmethionine synthetase, central domain A4U85_09875 PF00905 Penicillin binding protein transpeptidase domain A4U85_09890 PF02075 Crossover junction endodeoxyribonuclease RuvC A4U85_09895 PF01256 Carbohydrate kinase A4U85_09895 PF03853 YjeF-related protein N-terminus A4U85_09900 PF08331 Domain of unknown function (DUF1730) A4U85_09905 PF04055 Radical SAM superfamily A4U85_09905 PF06968 Biotin and Thiamin Synthesis associated domain A4U85_09920 PF16970 Type-1 fimbrial protein, A A4U85_09925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain A4U85_09925 PF02753 Pili assembly chaperone PapD, C-terminal domain A4U85_09930 PF00577 Outer membrane usher protein A4U85_09930 PF13953 PapC C-terminal domain A4U85_09930 PF13954 PapC N-terminal domain A4U85_09950 PF00892 EamA-like transporter family A4U85_09960 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A4U85_09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_09970 PF03466 LysR substrate binding domain A4U85_10000 PF10544 T5orf172 domain A4U85_10030 PF00665 Integrase core domain A4U85_10035 PF01695 IstB-like ATP binding protein A4U85_10045 PF00440 Bacterial regulatory proteins, tetR family A4U85_10055 PF01709 Transcriptional regulator A4U85_10060 PF01037 Lrp/AsnC ligand binding domain A4U85_10070 PF00005 ABC transporter A4U85_10075 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10080 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_10095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A4U85_10105 PF00296 Luciferase-like monooxygenase A4U85_10110 PF03180 NLPA lipoprotein A4U85_10115 PF03180 NLPA lipoprotein A4U85_10120 PF00005 ABC transporter A4U85_10120 PF09383 NIL domain A4U85_10125 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10130 PF01926 50S ribosome-binding GTPase A4U85_10130 PF06071 Protein of unknown function (DUF933) A4U85_10155 PF03591 AzlC protein A4U85_10160 PF05437 Branched-chain amino acid transport protein (AzlD) A4U85_10170 PF02222 ATP-grasp domain A4U85_10175 PF01966 HD domain A4U85_10175 PF01909 Nucleotidyltransferase domain A4U85_10175 PF08335 GlnD PII-uridylyltransferase A4U85_10180 PF00155 Aminotransferase class I and II A4U85_10190 PF12852 Cupin A4U85_10190 PF12833 Helix-turn-helix domain A4U85_10195 PF00255 Glutathione peroxidase A4U85_10200 PF01641 SelR domain A4U85_10205 PF00155 Aminotransferase class I and II A4U85_10210 PF00375 Sodium:dicarboxylate symporter family A4U85_10215 PF00710 Asparaginase, N-terminal A4U85_10215 PF17763 Glutaminase/Asparaginase C-terminal domain A4U85_10220 PF02811 PHP domain A4U85_10220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A4U85_10220 PF07733 Bacterial DNA polymerase III alpha NTPase domain A4U85_10220 PF01336 OB-fold nucleic acid binding domain A4U85_10220 PF14579 Helix-hairpin-helix motif A4U85_10225 PF00588 SpoU rRNA Methylase family A4U85_10230 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_10245 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_10245 PF13192 Thioredoxin domain A4U85_10260 PF03466 LysR substrate binding domain A4U85_10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10265 PF01758 Sodium Bile acid symporter family A4U85_10270 PF01022 Bacterial regulatory protein, arsR family A4U85_10275 PF03960 ArsC family A4U85_10285 PF13382 Adenine deaminase C-terminal domain A4U85_10285 PF01979 Amidohydrolase family A4U85_10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10295 PF03466 LysR substrate binding domain A4U85_10305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A4U85_10310 PF01177 Asp/Glu/Hydantoin racemase A4U85_10315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family A4U85_10320 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10325 PF00005 ABC transporter A4U85_10330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A4U85_10340 PF00083 Sugar (and other) transporter A4U85_10345 PF00296 Luciferase-like monooxygenase A4U85_10360 PF01654 Cytochrome bd terminal oxidase subunit I A4U85_10365 PF02322 Cytochrome bd terminal oxidase subunit II A4U85_10375 PF00155 Aminotransferase class I and II A4U85_10375 PF00392 Bacterial regulatory proteins, gntR family A4U85_10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10380 PF03466 LysR substrate binding domain A4U85_10395 PF00698 Acyl transferase domain A4U85_10400 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG A4U85_10410 PF01039 Carboxyl transferase domain A4U85_10415 PF06857 Malonate decarboxylase delta subunit (MdcD) A4U85_10420 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A4U85_10425 PF16957 Malonate decarboxylase, alpha subunit, transporter A4U85_10430 PF03466 LysR substrate binding domain A4U85_10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10440 PF07690 Major Facilitator Superfamily A4U85_10455 PF00155 Aminotransferase class I and II A4U85_10455 PF00392 Bacterial regulatory proteins, gntR family A4U85_10460 PF04172 LrgB-like family A4U85_10465 PF03788 LrgA family A4U85_10470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10470 PF03466 LysR substrate binding domain A4U85_10475 PF14834 Glutathione S-transferase, C-terminal domain A4U85_10475 PF02798 Glutathione S-transferase, N-terminal domain A4U85_10480 PF02798 Glutathione S-transferase, N-terminal domain A4U85_10485 PF03466 LysR substrate binding domain A4U85_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10495 PF00581 Rhodanese-like domain A4U85_10500 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_10510 PF00266 Aminotransferase class-V A4U85_10515 PF01810 LysE type translocator A4U85_10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10520 PF03466 LysR substrate binding domain A4U85_10525 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U85_10530 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U85_10535 PF00005 ABC transporter A4U85_10540 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10545 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10555 PF00072 Response regulator receiver domain A4U85_10560 PF00512 His Kinase A (phospho-acceptor) domain A4U85_10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_10560 PF00072 Response regulator receiver domain A4U85_10560 PF09308 LuxQ, periplasmic A4U85_10570 PF01037 Lrp/AsnC ligand binding domain A4U85_10570 PF13404 AsnC-type helix-turn-helix domain A4U85_10580 PF00717 Peptidase S24-like A4U85_10605 PF18011 C-terminal domain found in long catalases A4U85_10605 PF06628 Catalase-related immune-responsive A4U85_10605 PF00199 Catalase A4U85_10615 PF00994 Probable molybdopterin binding domain A4U85_10615 PF18146 Damage-inducible protein CinA KH domain A4U85_10615 PF02464 Competence-damaged protein A4U85_10650 PF03466 LysR substrate binding domain A4U85_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10670 PF13193 AMP-binding enzyme C-terminal domain A4U85_10670 PF00501 AMP-binding enzyme A4U85_10675 PF00440 Bacterial regulatory proteins, tetR family A4U85_10680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_10680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_10680 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_10685 PF01039 Carboxyl transferase domain A4U85_10690 PF00378 Enoyl-CoA hydratase/isomerase A4U85_10695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U85_10695 PF02785 Biotin carboxylase C-terminal domain A4U85_10695 PF00364 Biotin-requiring enzyme A4U85_10695 PF00289 Biotin carboxylase, N-terminal domain A4U85_10700 PF00682 HMGL-like A4U85_10705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10705 PF03466 LysR substrate binding domain A4U85_10720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_10720 PF12806 Acetyl-CoA dehydrogenase C-terminal like A4U85_10720 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_10720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_10730 PF07690 Major Facilitator Superfamily A4U85_10740 PF01144 Coenzyme A transferase A4U85_10745 PF01144 Coenzyme A transferase A4U85_10750 PF07690 Major Facilitator Superfamily A4U85_10755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_10755 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_10755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_10760 PF00378 Enoyl-CoA hydratase/isomerase A4U85_10770 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain A4U85_10770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U85_10770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U85_10775 PF02803 Thiolase, C-terminal domain A4U85_10775 PF00108 Thiolase, N-terminal domain A4U85_10780 PF09339 IclR helix-turn-helix domain A4U85_10785 PF07690 Major Facilitator Superfamily A4U85_10790 PF03060 Nitronate monooxygenase A4U85_10795 PF00378 Enoyl-CoA hydratase/isomerase A4U85_10800 PF09339 IclR helix-turn-helix domain A4U85_10805 PF02515 CoA-transferase family III A4U85_10810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_10810 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_10810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_10815 PF07690 Major Facilitator Superfamily A4U85_10820 PF13419 Haloacid dehalogenase-like hydrolase A4U85_10825 PF00266 Aminotransferase class-V A4U85_10830 PF01266 FAD dependent oxidoreductase A4U85_10835 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_10840 PF08402 TOBE domain A4U85_10840 PF00005 ABC transporter A4U85_10850 PF00392 Bacterial regulatory proteins, gntR family A4U85_10850 PF07702 UTRA domain A4U85_10855 PF01494 FAD binding domain A4U85_10860 PF09339 IclR helix-turn-helix domain A4U85_10860 PF01614 Bacterial transcriptional regulator A4U85_10865 PF02525 Flavodoxin-like fold A4U85_10870 PF03466 LysR substrate binding domain A4U85_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_10875 PF02627 Carboxymuconolactone decarboxylase family A4U85_10880 PF00171 Aldehyde dehydrogenase family A4U85_10890 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A4U85_10895 PF00171 Aldehyde dehydrogenase family A4U85_10900 PF00296 Luciferase-like monooxygenase A4U85_10905 PF01613 Flavin reductase like domain A4U85_10910 PF12697 Alpha/beta hydrolase family A4U85_10930 PF01292 Prokaryotic cytochrome b561 A4U85_10935 PF00199 Catalase A4U85_10940 PF07690 Major Facilitator Superfamily A4U85_10945 PF00682 HMGL-like A4U85_10950 PF02515 CoA-transferase family III A4U85_10965 PF06719 AraC-type transcriptional regulator N-terminus A4U85_10965 PF12833 Helix-turn-helix domain A4U85_11005 PF03061 Thioesterase superfamily A4U85_11010 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_11015 PF08223 PaaX-like protein C-terminal domain A4U85_11015 PF07848 PaaX-like protein A4U85_11020 PF14535 AMP-binding enzyme C-terminal domain A4U85_11020 PF00501 AMP-binding enzyme A4U85_11025 PF00108 Thiolase, N-terminal domain A4U85_11025 PF02803 Thiolase, C-terminal domain A4U85_11030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U85_11030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U85_11030 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain A4U85_11035 PF00378 Enoyl-CoA hydratase/isomerase A4U85_11040 PF00378 Enoyl-CoA hydratase/isomerase A4U85_11045 PF00970 Oxidoreductase FAD-binding domain A4U85_11045 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_11045 PF00175 Oxidoreductase NAD-binding domain A4U85_11050 PF01883 Iron-sulfur cluster assembly protein A4U85_11055 PF05138 Phenylacetic acid catabolic protein A4U85_11060 PF06243 Phenylacetic acid degradation B A4U85_11065 PF05138 Phenylacetic acid catabolic protein A4U85_11070 PF00171 Aldehyde dehydrogenase family A4U85_11070 PF01575 MaoC like domain A4U85_11075 PF03315 Serine dehydratase beta chain A4U85_11075 PF03313 Serine dehydratase alpha chain A4U85_11080 PF13520 Amino acid permease A4U85_11085 PF00171 Aldehyde dehydrogenase family A4U85_11090 PF00083 Sugar (and other) transporter A4U85_11100 PF04324 BFD-like [2Fe-2S] binding domain A4U85_11100 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_11110 PF01266 FAD dependent oxidoreductase A4U85_11110 PF01266 FAD dependent oxidoreductase A4U85_11115 PF05544 Proline racemase A4U85_11120 PF00392 Bacterial regulatory proteins, gntR family A4U85_11130 PF00701 Dihydrodipicolinate synthetase family A4U85_11155 PF02677 Epoxyqueuosine reductase QueH A4U85_11170 PF07690 Major Facilitator Superfamily A4U85_11175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A4U85_11185 PF03466 LysR substrate binding domain A4U85_11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_11215 PF00004 ATPase family associated with various cellular activities (AAA) A4U85_11215 PF07724 AAA domain (Cdc48 subfamily) A4U85_11215 PF17871 AAA lid domain A4U85_11215 PF10431 C-terminal, D2-small domain, of ClpB protein A4U85_11225 PF01389 OmpA-like transmembrane domain A4U85_11225 PF00691 OmpA family A4U85_11295 PF00005 ABC transporter A4U85_11300 PF00497 Bacterial extracellular solute-binding proteins, family 3 A4U85_11305 PF01425 Amidase A4U85_11310 PF01402 Ribbon-helix-helix protein, copG family A4U85_11310 PF08753 NikR C terminal nickel binding domain A4U85_11325 PF01638 HxlR-like helix-turn-helix A4U85_11330 PF02525 Flavodoxin-like fold A4U85_11335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U85_11335 PF00289 Biotin carboxylase, N-terminal domain A4U85_11335 PF02785 Biotin carboxylase C-terminal domain A4U85_11350 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_11350 PF13823 Alcohol dehydrogenase GroES-associated A4U85_11350 PF00107 Zinc-binding dehydrogenase A4U85_11360 PF00440 Bacterial regulatory proteins, tetR family A4U85_11375 PF13332 Hemagglutinin repeat A4U85_11375 PF05860 haemagglutination activity domain A4U85_11375 PF13018 Extended Signal Peptide of Type V secretion system A4U85_11375 PF04829 Pre-toxin domain with VENN motif A4U85_11380 PF17287 POTRA domain A4U85_11380 PF08479 POTRA domain, ShlB-type A4U85_11380 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB A4U85_11385 PF00654 Voltage gated chloride channel A4U85_11390 PF02785 Biotin carboxylase C-terminal domain A4U85_11390 PF00289 Biotin carboxylase, N-terminal domain A4U85_11390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4U85_11390 PF00364 Biotin-requiring enzyme A4U85_11400 PF07286 Protein of unknown function (DUF1445) A4U85_11405 PF03746 LamB/YcsF family A4U85_11410 PF01566 Natural resistance-associated macrophage protein A4U85_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_11415 PF03466 LysR substrate binding domain A4U85_11430 PF13419 Haloacid dehalogenase-like hydrolase A4U85_11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U85_11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U85_11465 PF07690 Major Facilitator Superfamily A4U85_11475 PF03279 Bacterial lipid A biosynthesis acyltransferase A4U85_11480 PF00563 EAL domain A4U85_11480 PF03707 Bacterial signalling protein N terminal repeat A4U85_11480 PF00990 Diguanylate cyclase, GGDEF domain A4U85_11485 PF00892 EamA-like transporter family A4U85_11490 PF01037 Lrp/AsnC ligand binding domain A4U85_11495 PF00488 MutS domain V A4U85_11495 PF05192 MutS domain III A4U85_11495 PF01624 MutS domain I A4U85_11495 PF05188 MutS domain II A4U85_11495 PF05190 MutS family domain IV A4U85_11505 PF00037 4Fe-4S binding domain A4U85_11505 PF11953 Domain of unknown function (DUF3470) A4U85_11515 PF01596 O-methyltransferase A4U85_11525 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_11530 PF01205 Uncharacterized protein family UPF0029 A4U85_11540 PF03412 Peptidase C39 family A4U85_11540 PF00005 ABC transporter A4U85_11540 PF00664 ABC transporter transmembrane region A4U85_11590 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4U85_11590 PF00005 ABC transporter A4U85_11595 PF03968 OstA-like protein A4U85_11610 PF00571 CBS domain A4U85_11610 PF01380 SIS domain A4U85_11615 PF09190 DALR domain A4U85_11615 PF01406 tRNA synthetases class I (C) catalytic domain A4U85_11625 PF00589 Phage integrase family A4U85_11815 PF09588 YqaJ-like viral recombinase domain A4U85_11825 PF13361 UvrD-like helicase C-terminal domain A4U85_11825 PF00580 UvrD/REP helicase N-terminal domain A4U85_11830 PF02954 Bacterial regulatory protein, Fis family A4U85_11905 PF01638 HxlR-like helix-turn-helix A4U85_11910 PF07690 Major Facilitator Superfamily A4U85_11930 PF03807 NADP oxidoreductase coenzyme F420-dependent A4U85_11930 PF14748 Pyrroline-5-carboxylate reductase dimerisation A4U85_11940 PF00313 'Cold-shock' DNA-binding domain A4U85_11945 PF01810 LysE type translocator A4U85_11980 PF13742 OB-fold nucleic acid binding domain A4U85_11980 PF02601 Exonuclease VII, large subunit A4U85_12015 PF00376 MerR family regulatory protein A4U85_12015 PF09278 MerR, DNA binding A4U85_12020 PF00403 Heavy-metal-associated domain A4U85_12025 PF00403 Heavy-metal-associated domain A4U85_12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_12030 PF03466 LysR substrate binding domain A4U85_12035 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A4U85_12035 PF00355 Rieske [2Fe-2S] domain A4U85_12040 PF00866 Ring hydroxylating beta subunit A4U85_12045 PF00175 Oxidoreductase NAD-binding domain A4U85_12045 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_12045 PF00970 Oxidoreductase FAD-binding domain A4U85_12050 PF00106 short chain dehydrogenase A4U85_12055 PF03594 Benzoate membrane transport protein A4U85_12060 PF07690 Major Facilitator Superfamily A4U85_12070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A4U85_12070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A4U85_12075 PF00271 Helicase conserved C-terminal domain A4U85_12075 PF00270 DEAD/DEAH box helicase A4U85_12075 PF11898 Domain of unknown function (DUF3418) A4U85_12075 PF04408 Helicase associated domain (HA2) A4U85_12075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A4U85_12080 PF10417 C-terminal domain of 1-Cys peroxiredoxin A4U85_12080 PF00578 AhpC/TSA family A4U85_12100 PF13192 Thioredoxin domain A4U85_12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_12110 PF02798 Glutathione S-transferase, N-terminal domain A4U85_12110 PF00043 Glutathione S-transferase, C-terminal domain A4U85_12120 PF02390 Putative methyltransferase A4U85_12140 PF13417 Glutathione S-transferase, N-terminal domain A4U85_12140 PF00043 Glutathione S-transferase, C-terminal domain A4U85_12150 PF00691 OmpA family A4U85_12150 PF13488 Glycine zipper A4U85_12155 PF01979 Amidohydrolase family A4U85_12160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A4U85_12160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A4U85_12170 PF10672 S-adenosylmethionine-dependent methyltransferase A4U85_12170 PF02926 THUMP domain A4U85_12170 PF01170 Putative RNA methylase family UPF0020 A4U85_12185 PF07724 AAA domain (Cdc48 subfamily) A4U85_12185 PF02861 Clp amino terminal domain, pathogenicity island component A4U85_12185 PF10431 C-terminal, D2-small domain, of ClpB protein A4U85_12185 PF00004 ATPase family associated with various cellular activities (AAA) A4U85_12185 PF17871 AAA lid domain A4U85_12200 PF02566 OsmC-like protein A4U85_12205 PF00027 Cyclic nucleotide-binding domain A4U85_12205 PF13545 Crp-like helix-turn-helix domain A4U85_12210 PF00248 Aldo/keto reductase family A4U85_12225 PF00709 Adenylosuccinate synthetase A4U85_12230 PF13393 Histidyl-tRNA synthetase A4U85_12235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4U85_12235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A4U85_12240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A4U85_12240 PF01411 tRNA synthetases class II (A) A4U85_12240 PF02272 DHHA1 domain A4U85_12245 PF13356 Arm DNA-binding domain A4U85_12245 PF00589 Phage integrase family A4U85_12250 PF00717 Peptidase S24-like A4U85_12255 PF11799 impB/mucB/samB family C-terminal domain A4U85_12255 PF00817 impB/mucB/samB family A4U85_12255 PF13438 Domain of unknown function (DUF4113) A4U85_12370 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) A4U85_12395 PF06381 Protein of unknown function (DUF1073) A4U85_12465 PF00145 C-5 cytosine-specific DNA methylase A4U85_12480 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT A4U85_12485 PF00717 Peptidase S24-like A4U85_12485 PF01726 LexA DNA binding domain A4U85_12540 PF13840 ACT domain A4U85_12540 PF00696 Amino acid kinase family A4U85_12540 PF01842 ACT domain A4U85_12545 PF02599 Global regulator protein family A4U85_12550 PF01351 Ribonuclease HII A4U85_12560 PF01292 Prokaryotic cytochrome b561 A4U85_12565 PF00962 Adenosine/AMP deaminase A4U85_12570 PF00860 Permease family A4U85_12580 PF00743 Flavin-binding monooxygenase-like A4U85_12585 PF00106 short chain dehydrogenase A4U85_12595 PF02678 Pirin A4U85_12595 PF17954 Quercetinase C-terminal cupin domain A4U85_12600 PF00440 Bacterial regulatory proteins, tetR family A4U85_12600 PF17932 Tetracyclin repressor-like, C-terminal domain A4U85_12610 PF00106 short chain dehydrogenase A4U85_12615 PF00743 Flavin-binding monooxygenase-like A4U85_12620 PF04072 Leucine carboxyl methyltransferase A4U85_12625 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A4U85_12625 PF12833 Helix-turn-helix domain A4U85_12630 PF00743 Flavin-binding monooxygenase-like A4U85_12635 PF00106 short chain dehydrogenase A4U85_12640 PF07859 alpha/beta hydrolase fold A4U85_12645 PF05199 GMC oxidoreductase A4U85_12650 PF03573 outer membrane porin, OprD family A4U85_12655 PF07690 Major Facilitator Superfamily A4U85_12660 PF00355 Rieske [2Fe-2S] domain A4U85_12665 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_12665 PF00175 Oxidoreductase NAD-binding domain A4U85_12680 PF07690 Major Facilitator Superfamily A4U85_12685 PF00378 Enoyl-CoA hydratase/isomerase A4U85_12690 PF00171 Aldehyde dehydrogenase family A4U85_12700 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_12700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_12700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_12705 PF03573 outer membrane porin, OprD family A4U85_12720 PF07519 Tannase and feruloyl esterase A4U85_12725 PF07729 FCD domain A4U85_12725 PF00392 Bacterial regulatory proteins, gntR family A4U85_12730 PF00171 Aldehyde dehydrogenase family A4U85_12735 PF00701 Dihydrodipicolinate synthetase family A4U85_12740 PF13378 Enolase C-terminal domain-like A4U85_12745 PF07690 Major Facilitator Superfamily A4U85_12750 PF08666 SAF domain A4U85_12750 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus A4U85_12755 PF00892 EamA-like transporter family A4U85_12760 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A4U85_12760 PF12833 Helix-turn-helix domain A4U85_12765 PF00171 Aldehyde dehydrogenase family A4U85_12790 PF00324 Amino acid permease A4U85_12800 PF00202 Aminotransferase class-III A4U85_12810 PF00171 Aldehyde dehydrogenase family A4U85_12820 PF00392 Bacterial regulatory proteins, gntR family A4U85_12820 PF07729 FCD domain A4U85_12830 PF00324 Amino acid permease A4U85_12835 PF01266 FAD dependent oxidoreductase A4U85_12840 PF00324 Amino acid permease A4U85_12850 PF05643 Putative bacterial lipoprotein (DUF799) A4U85_12860 PF03783 Curli production assembly/transport component CsgG A4U85_12875 PF03180 NLPA lipoprotein A4U85_12880 PF05987 Bacterial protein of unknown function (DUF898) A4U85_12895 PF00440 Bacterial regulatory proteins, tetR family A4U85_12920 PF02384 N-6 DNA Methylase A4U85_12925 PF02661 Fic/DOC family A4U85_12940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4U85_12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_12940 PF00403 Heavy-metal-associated domain A4U85_12945 PF03203 MerC mercury resistance protein A4U85_12955 PF02411 MerT mercuric transport protein A4U85_12960 PF00376 MerR family regulatory protein A4U85_12960 PF09278 MerR, DNA binding A4U85_12970 PF01252 Signal peptidase (SPase) II A4U85_12980 PF13411 MerR HTH family regulatory protein A4U85_13055 PF13356 Arm DNA-binding domain A4U85_13055 PF00589 Phage integrase family A4U85_13065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U85_13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_13070 PF00764 Arginosuccinate synthase A4U85_13075 PF00360 Phytochrome region A4U85_13075 PF00990 Diguanylate cyclase, GGDEF domain A4U85_13075 PF01590 GAF domain A4U85_13075 PF00563 EAL domain A4U85_13080 PF01979 Amidohydrolase family A4U85_13085 PF00929 Exonuclease A4U85_13095 PF07715 TonB-dependent Receptor Plug Domain A4U85_13095 PF00593 TonB dependent receptor A4U85_13100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4U85_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_13105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4U85_13105 PF00005 ABC transporter A4U85_13110 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_13110 PF12911 N-terminal TM domain of oligopeptide transport permease C A4U85_13115 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_13120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4U85_13125 PF01476 LysM domain A4U85_13125 PF01464 Transglycosylase SLT domain A4U85_13125 PF01476 LysM domain A4U85_13125 PF01464 Transglycosylase SLT domain A4U85_13130 PF00929 Exonuclease A4U85_13140 PF09297 NADH pyrophosphatase zinc ribbon domain A4U85_13140 PF00293 NUDIX domain A4U85_13150 PF04972 BON domain A4U85_13155 PF02021 Uncharacterised protein family UPF0102 A4U85_13160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A4U85_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_13170 PF03466 LysR substrate binding domain A4U85_13175 PF01810 LysE type translocator A4U85_13185 PF13411 MerR HTH family regulatory protein A4U85_13195 PF01494 FAD binding domain A4U85_13200 PF01494 FAD binding domain A4U85_13205 PF00557 Metallopeptidase family M24 A4U85_13205 PF05195 Aminopeptidase P, N-terminal domain A4U85_13240 PF08019 Phosphoethanolamine transferase EptA/EptB A4U85_13240 PF00884 Sulfatase A4U85_13285 PF01476 LysM domain A4U85_13285 PF01551 Peptidase family M23 A4U85_13285 PF08525 Opacity-associated protein A N-terminal motif A4U85_13600 PF01812 5-formyltetrahydrofolate cyclo-ligase family A4U85_13610 PF05662 Coiled stalk of trimeric autotransporter adhesin A4U85_13610 PF13018 Extended Signal Peptide of Type V secretion system A4U85_13610 PF05658 Head domain of trimeric autotransporter adhesin A4U85_13610 PF03895 YadA-like membrane anchor domain A4U85_13615 PF05362 Lon protease (S16) C-terminal proteolytic domain A4U85_13615 PF00004 ATPase family associated with various cellular activities (AAA) A4U85_13615 PF02190 ATP-dependent protease La (LON) substrate-binding domain A4U85_13620 PF02590 Predicted SPOUT methyltransferase A4U85_13625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A4U85_13635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A4U85_13635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4U85_13640 PF04060 Putative Fe-S cluster A4U85_13645 PF00633 Helix-hairpin-helix motif A4U85_13645 PF10576 Iron-sulfur binding domain of endonuclease III A4U85_13645 PF00730 HhH-GPD superfamily base excision DNA repair protein A4U85_13650 PF05191 Adenylate kinase, active site lid A4U85_13665 PF00905 Penicillin binding protein transpeptidase domain A4U85_13665 PF03717 Penicillin-binding Protein dimerisation domain A4U85_13680 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4U85_13685 PF01730 UreF A4U85_13690 PF05194 UreE urease accessory protein, C-terminal domain A4U85_13690 PF02814 UreE urease accessory protein, N-terminal domain A4U85_13695 PF00449 Urease alpha-subunit, N-terminal domain A4U85_13695 PF01979 Amidohydrolase family A4U85_13700 PF00699 Urease beta subunit A4U85_13705 PF00547 Urease, gamma subunit A4U85_13710 PF01774 UreD urease accessory protein A4U85_13725 PF00463 Isocitrate lyase family A4U85_13730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_13730 PF03466 LysR substrate binding domain A4U85_13735 PF01595 Cyclin M transmembrane N-terminal domain A4U85_13735 PF03471 Transporter associated domain A4U85_13735 PF00571 CBS domain A4U85_13740 PF03600 Citrate transporter A4U85_13755 PF00009 Elongation factor Tu GTP binding domain A4U85_13760 PF01507 Phosphoadenosine phosphosulfate reductase family A4U85_13765 PF14052 Capsule assembly protein Wzi A4U85_13770 PF01336 OB-fold nucleic acid binding domain A4U85_13770 PF00152 tRNA synthetases class II (D, K and N) A4U85_13785 PF00301 Rubredoxin A4U85_13790 PF18113 Rubredoxin binding C-terminal domain A4U85_13790 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_13795 PF00561 alpha/beta hydrolase fold A4U85_13800 PF03466 LysR substrate binding domain A4U85_13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_13810 PF02503 Polyphosphate kinase middle domain A4U85_13810 PF17941 Polyphosphate kinase C-terminal domain 1 A4U85_13810 PF13089 Polyphosphate kinase N-terminal domain A4U85_13810 PF13090 Polyphosphate kinase C-terminal domain 2 A4U85_13815 PF00912 Transglycosylase A4U85_13820 PF01694 Rhomboid family A4U85_13830 PF00005 ABC transporter A4U85_13835 PF13472 GDSL-like Lipase/Acylhydrolase family A4U85_13840 PF00484 Carbonic anhydrase A4U85_13845 PF00561 alpha/beta hydrolase fold A4U85_13855 PF07715 TonB-dependent Receptor Plug Domain A4U85_13855 PF00593 TonB dependent receptor A4U85_13860 PF01521 Iron-sulphur cluster biosynthesis A4U85_13860 PF01106 NifU-like domain A4U85_13870 PF00884 Sulfatase A4U85_13875 PF03781 Sulfatase-modifying factor enzyme 1 A4U85_13890 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_13895 PF01384 Phosphate transporter family A4U85_13900 PF02574 Homocysteine S-methyltransferase A4U85_13900 PF00809 Pterin binding enzyme A4U85_13900 PF02965 Vitamin B12 dependent methionine synthase, activation domain A4U85_13900 PF02607 B12 binding domain A4U85_13900 PF02310 B12 binding domain A4U85_13905 PF02779 Transketolase, pyrimidine binding domain A4U85_13905 PF02780 Transketolase, C-terminal domain A4U85_13910 PF00456 Transketolase, thiamine diphosphate binding domain A4U85_13915 PF07690 Major Facilitator Superfamily A4U85_13925 PF03466 LysR substrate binding domain A4U85_13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_13935 PF01263 Aldose 1-epimerase A4U85_13940 PF07690 Major Facilitator Superfamily A4U85_13945 PF12833 Helix-turn-helix domain A4U85_13945 PF02311 AraC-like ligand binding domain A4U85_13950 PF04960 Glutaminase A4U85_13955 PF01327 Polypeptide deformylase A4U85_13960 PF07690 Major Facilitator Superfamily A4U85_13970 PF00205 Thiamine pyrophosphate enzyme, central domain A4U85_13970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U85_13970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U85_13975 PF00171 Aldehyde dehydrogenase family A4U85_13980 PF01958 Domain of unknown function DUF108 A4U85_13980 PF03447 Homoserine dehydrogenase, NAD binding domain A4U85_13990 PF12697 Alpha/beta hydrolase family A4U85_14000 PF07690 Major Facilitator Superfamily A4U85_14005 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_14005 PF14759 Reductase C-terminal A4U85_14010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A4U85_14020 PF00355 Rieske [2Fe-2S] domain A4U85_14030 PF00355 Rieske [2Fe-2S] domain A4U85_14035 PF09339 IclR helix-turn-helix domain A4U85_14035 PF01614 Bacterial transcriptional regulator A4U85_14050 PF00378 Enoyl-CoA hydratase/isomerase A4U85_14060 PF00535 Glycosyl transferase family 2 A4U85_14065 PF14883 Hypothetical glycosyl hydrolase family 13 A4U85_14065 PF01522 Polysaccharide deacetylase A4U85_14070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U85_14075 PF07152 YaeQ protein A4U85_14080 PF00375 Sodium:dicarboxylate symporter family A4U85_14085 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4U85_14085 PF07683 Cobalamin synthesis protein cobW C-terminal domain A4U85_14095 PF03061 Thioesterase superfamily A4U85_14105 PF02028 BCCT, betaine/carnitine/choline family transporter A4U85_14110 PF02028 BCCT, betaine/carnitine/choline family transporter A4U85_14115 PF00440 Bacterial regulatory proteins, tetR family A4U85_14115 PF13977 BetI-type transcriptional repressor, C-terminal A4U85_14120 PF00171 Aldehyde dehydrogenase family A4U85_14125 PF05199 GMC oxidoreductase A4U85_14125 PF00732 GMC oxidoreductase A4U85_14130 PF06039 Malate:quinone oxidoreductase (Mqo) A4U85_14140 PF02574 Homocysteine S-methyltransferase A4U85_14145 PF13520 Amino acid permease A4U85_14190 PF00701 Dihydrodipicolinate synthetase family A4U85_14195 PF00083 Sugar (and other) transporter A4U85_14255 PF18019 HD domain A4U85_14270 PF09615 CRISPR-associated protein (Cas_Csy3) A4U85_14280 PF01867 CRISPR associated protein Cas1 A4U85_14315 PF00436 Single-strand binding protein family A4U85_14360 PF13356 Arm DNA-binding domain A4U85_14360 PF00589 Phage integrase family A4U85_14375 PF07690 Major Facilitator Superfamily A4U85_14380 PF13533 Biotin-lipoyl like A4U85_14385 PF03061 Thioesterase superfamily A4U85_14390 PF00490 Delta-aminolevulinic acid dehydratase A4U85_14395 PF01266 FAD dependent oxidoreductase A4U85_14400 PF01370 NAD dependent epimerase/dehydratase family A4U85_14400 PF08338 Domain of unknown function (DUF1731) A4U85_14420 PF00149 Calcineurin-like phosphoesterase A4U85_14420 PF12320 Type 5 capsule protein repressor C-terminal domain A4U85_14430 PF01168 Alanine racemase, N-terminal domain A4U85_14435 PF00437 Type II/IV secretion system protein A4U85_14440 PF00437 Type II/IV secretion system protein A4U85_14445 PF01475 Ferric uptake regulator family A4U85_14450 PF04355 SmpA / OmlA family A4U85_14455 PF03658 RnfH family Ubiquitin A4U85_14470 PF01814 Hemerythrin HHE cation binding domain A4U85_14475 PF13230 Glutamine amidotransferases class-II A4U85_14485 PF00696 Amino acid kinase family A4U85_14490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U85_14490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U85_14490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U85_14490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U85_14495 PF00692 dUTPase A4U85_14500 PF00580 UvrD/REP helicase N-terminal domain A4U85_14500 PF13361 UvrD-like helicase C-terminal domain A4U85_14505 PF00691 OmpA family A4U85_14505 PF13488 Glycine zipper A4U85_14510 PF01553 Acyltransferase A4U85_14520 PF03775 Septum formation inhibitor MinC, C-terminal domain A4U85_14525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A4U85_14530 PF03776 Septum formation topological specificity factor MinE A4U85_14540 PF01810 LysE type translocator A4U85_14545 PF17854 FtsK alpha domain A4U85_14545 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A4U85_14545 PF09397 Ftsk gamma domain A4U85_14545 PF01580 FtsK/SpoIIIE family A4U85_14550 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4U85_14555 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A4U85_14560 PF04377 Arginine-tRNA-protein transferase, C terminus A4U85_14560 PF04376 Arginine-tRNA-protein transferase, N terminus A4U85_14565 PF00583 Acetyltransferase (GNAT) family A4U85_14580 PF00009 Elongation factor Tu GTP binding domain A4U85_14580 PF03143 Elongation factor Tu C-terminal domain A4U85_14580 PF03144 Elongation factor Tu domain 2 A4U85_14585 PF00679 Elongation factor G C-terminus A4U85_14585 PF14492 Elongation Factor G, domain II A4U85_14585 PF03764 Elongation factor G, domain IV A4U85_14585 PF03144 Elongation factor Tu domain 2 A4U85_14585 PF00009 Elongation factor Tu GTP binding domain A4U85_14590 PF00177 Ribosomal protein S7p/S5e A4U85_14595 PF00164 Ribosomal protein S12/S23 A4U85_14605 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U85_14605 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U85_14615 PF02678 Pirin A4U85_14615 PF05726 Pirin C-terminal cupin domain A4U85_14625 PF00795 Carbon-nitrogen hydrolase A4U85_14625 PF02540 NAD synthase A4U85_14640 PF00175 Oxidoreductase NAD-binding domain A4U85_14640 PF00111 2Fe-2S iron-sulfur cluster binding domain A4U85_14640 PF00970 Oxidoreductase FAD-binding domain A4U85_14645 PF00171 Aldehyde dehydrogenase family A4U85_14650 PF00355 Rieske [2Fe-2S] domain A4U85_14650 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A4U85_14655 PF07859 alpha/beta hydrolase fold A4U85_14660 PF02028 BCCT, betaine/carnitine/choline family transporter A4U85_14665 PF00180 Isocitrate/isopropylmalate dehydrogenase A4U85_14670 PF03466 LysR substrate binding domain A4U85_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_14690 PF00037 4Fe-4S binding domain A4U85_14695 PF01467 Cytidylyltransferase-like A4U85_14700 PF01668 SmpB protein A4U85_14705 PF03358 NADPH-dependent FMN reductase A4U85_14715 PF01479 S4 domain A4U85_14715 PF00849 RNA pseudouridylate synthase A4U85_14720 PF13525 Outer membrane lipoprotein A4U85_14725 PF08275 DNA primase catalytic core, N-terminal domain A4U85_14725 PF10410 DnaB-helicase binding domain of primase A4U85_14725 PF08278 DNA primase DnaG DnaB-binding A4U85_14725 PF01807 CHC2 zinc finger A4U85_14730 PF01488 Shikimate / quinate 5-dehydrogenase A4U85_14730 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A4U85_14730 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A4U85_14740 PF03550 Outer membrane lipoprotein LolB A4U85_14745 PF00288 GHMP kinases N terminal domain A4U85_14745 PF08544 GHMP kinases C terminal A4U85_14770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A4U85_14770 PF14572 Phosphoribosyl synthetase-associated domain A4U85_14775 PF01386 Ribosomal L25p family A4U85_14780 PF01195 Peptidyl-tRNA hydrolase A4U85_14785 PF02261 Aspartate decarboxylase A4U85_14800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A4U85_14810 PF03070 TENA/THI-4/PQQC family A4U85_14810 PF02581 Thiamine monophosphate synthase A4U85_14810 PF08543 Phosphomethylpyrimidine kinase A4U85_14815 PF01476 LysM domain A4U85_14815 PF04972 BON domain A4U85_14820 PF00550 Phosphopantetheine attachment site A4U85_14830 PF00698 Acyl transferase domain A4U85_14835 PF01783 Ribosomal L32p protein family A4U85_14840 PF02620 Large ribosomal RNA subunit accumulation protein YceD A4U85_14845 PF04315 Elongation factor P hydroxylase A4U85_14850 PF01300 Telomere recombination A4U85_14855 PF02616 Segregation and condensation protein ScpA A4U85_14860 PF04079 Segregation and condensation complex subunit ScpB A4U85_14865 PF00849 RNA pseudouridylate synthase A4U85_14865 PF01479 S4 domain A4U85_14880 PF00155 Aminotransferase class I and II A4U85_14885 PF06968 Biotin and Thiamin Synthesis associated domain A4U85_14885 PF04055 Radical SAM superfamily A4U85_14885 PF00202 Aminotransferase class-III A4U85_14890 PF08241 Methyltransferase domain A4U85_14890 PF12697 Alpha/beta hydrolase family A4U85_14895 PF02358 Trehalose-phosphatase A4U85_14900 PF00982 Glycosyltransferase family 20 A4U85_14905 PF07690 Major Facilitator Superfamily A4U85_14910 PF00210 Ferritin-like domain A4U85_14915 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A4U85_14915 PF12826 Helix-hairpin-helix motif A4U85_14915 PF03120 NAD-dependent DNA ligase OB-fold domain A4U85_14915 PF01653 NAD-dependent DNA ligase adenylation domain A4U85_14915 PF00533 BRCA1 C Terminus (BRCT) domain A4U85_14925 PF02463 RecF/RecN/SMC N terminal domain A4U85_14925 PF06470 SMC proteins Flexible Hinge Domain A4U85_14935 PF01925 Sulfite exporter TauE/SafE A4U85_14945 PF03309 Type III pantothenate kinase A4U85_14950 PF02881 SRP54-type protein, helical bundle domain A4U85_14950 PF02978 Signal peptide binding domain A4U85_14950 PF00448 SRP54-type protein, GTPase domain A4U85_14960 PF01207 Dihydrouridine synthase (Dus) A4U85_14990 PF00692 dUTPase A4U85_15005 PF01048 Phosphorylase superfamily A4U85_15010 PF10609 NUBPL iron-transfer P-loop NTPase A4U85_15020 PF01588 Putative tRNA binding domain A4U85_15020 PF09334 tRNA synthetases class I (M) A4U85_15045 PF13533 Biotin-lipoyl like A4U85_15050 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_15065 PF05552 Conserved TM helix A4U85_15080 PF00175 Oxidoreductase NAD-binding domain A4U85_15080 PF00970 Oxidoreductase FAD-binding domain A4U85_15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_15085 PF03466 LysR substrate binding domain A4U85_15090 PF00313 'Cold-shock' DNA-binding domain A4U85_15100 PF00361 Proton-conducting membrane transporter A4U85_15105 PF00361 Proton-conducting membrane transporter A4U85_15110 PF00361 Proton-conducting membrane transporter A4U85_15110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A4U85_15115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A4U85_15120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A4U85_15125 PF12838 4Fe-4S dicluster domain A4U85_15130 PF00146 NADH dehydrogenase A4U85_15135 PF00384 Molybdopterin oxidoreductase A4U85_15135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A4U85_15135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4U85_15140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A4U85_15140 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A4U85_15140 PF10531 SLBB domain A4U85_15150 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A4U85_15150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A4U85_15155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A4U85_15160 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A4U85_15165 PF00990 Diguanylate cyclase, GGDEF domain A4U85_15165 PF17151 Periplasmic sensor domain A4U85_15175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_15175 PF00672 HAMP domain A4U85_15175 PF00512 His Kinase A (phospho-acceptor) domain A4U85_15180 PF00486 Transcriptional regulatory protein, C terminal A4U85_15180 PF00072 Response regulator receiver domain A4U85_15190 PF03477 ATP cone domain A4U85_15190 PF02867 Ribonucleotide reductase, barrel domain A4U85_15190 PF00317 Ribonucleotide reductase, all-alpha domain A4U85_15200 PF00268 Ribonucleotide reductase, small chain A4U85_15215 PF17074 Darcynin, domain of unknown function A4U85_15260 PF01613 Flavin reductase like domain A4U85_15265 PF08267 Cobalamin-independent synthase, N-terminal domain A4U85_15265 PF01717 Cobalamin-independent synthase, Catalytic domain A4U85_15275 PF03466 LysR substrate binding domain A4U85_15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_15280 PF01810 LysE type translocator A4U85_15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_15285 PF03466 LysR substrate binding domain A4U85_15290 PF07690 Major Facilitator Superfamily A4U85_15300 PF03466 LysR substrate binding domain A4U85_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_15305 PF14537 Cytochrome c3 A4U85_15305 PF00890 FAD binding domain A4U85_15320 PF00440 Bacterial regulatory proteins, tetR family A4U85_15320 PF17932 Tetracyclin repressor-like, C-terminal domain A4U85_15325 PF02515 CoA-transferase family III A4U85_15330 PF07690 Major Facilitator Superfamily A4U85_15335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_15335 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_15340 PF03466 LysR substrate binding domain A4U85_15345 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_15345 PF00107 Zinc-binding dehydrogenase A4U85_15350 PF00962 Adenosine/AMP deaminase A4U85_15375 PF02445 Quinolinate synthetase A protein A4U85_15380 PF01960 ArgJ family A4U85_15385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4U85_15385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A4U85_15390 PF00893 Small Multidrug Resistance protein A4U85_15405 PF07732 Multicopper oxidase A4U85_15405 PF00394 Multicopper oxidase A4U85_15405 PF07731 Multicopper oxidase A4U85_15420 PF00834 Ribulose-phosphate 3 epimerase family A4U85_15430 PF00756 Putative esterase A4U85_15440 PF04445 Putative SAM-dependent methyltransferase A4U85_15445 PF00814 Glycoprotease family A4U85_15450 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_15455 PF00293 NUDIX domain A4U85_15495 PF04715 Anthranilate synthase component I, N terminal region A4U85_15495 PF00425 chorismate binding enzyme A4U85_15500 PF00155 Aminotransferase class I and II A4U85_15505 PF00815 Histidinol dehydrogenase A4U85_15510 PF01634 ATP phosphoribosyltransferase A4U85_15515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A4U85_15520 PF01722 BolA-like protein A4U85_15525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A4U85_15530 PF00309 Sigma-54 factor, Activator interacting domain (AID) A4U85_15530 PF04552 Sigma-54, DNA binding domain A4U85_15530 PF04963 Sigma-54 factor, core binding domain A4U85_15575 PF00795 Carbon-nitrogen hydrolase A4U85_15585 PF01047 MarR family A4U85_15590 PF02566 OsmC-like protein A4U85_15595 PF00437 Type II/IV secretion system protein A4U85_15615 PF01367 5'-3' exonuclease, C-terminal SAM fold A4U85_15615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A4U85_15615 PF00476 DNA polymerase family A A4U85_15615 PF01612 3'-5' exonuclease A4U85_15620 PF02325 YGGT family A4U85_15625 PF14748 Pyrroline-5-carboxylate reductase dimerisation A4U85_15625 PF03807 NADP oxidoreductase coenzyme F420-dependent A4U85_15630 PF09179 TilS substrate binding domain A4U85_15630 PF11734 TilS substrate C-terminal domain A4U85_15630 PF01171 PP-loop family A4U85_15635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A4U85_15640 PF02541 Ppx/GppA phosphatase family A4U85_15645 PF00085 Thioredoxin A4U85_15650 PF07498 Rho termination factor, N-terminal domain A4U85_15650 PF07497 Rho termination factor, RNA-binding domain A4U85_15650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U85_15660 PF00216 Bacterial DNA-binding protein A4U85_15665 PF03484 tRNA synthetase B5 domain A4U85_15665 PF03147 Ferredoxin-fold anticodon binding domain A4U85_15665 PF01588 Putative tRNA binding domain A4U85_15665 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A4U85_15665 PF03483 B3/4 domain A4U85_15670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A4U85_15670 PF01409 tRNA synthetases class II core domain (F) A4U85_15690 PF00453 Ribosomal protein L20 A4U85_15695 PF01632 Ribosomal protein L35 A4U85_15700 PF07690 Major Facilitator Superfamily A4U85_15705 PF09335 SNARE associated Golgi protein A4U85_15710 PF00043 Glutathione S-transferase, C-terminal domain A4U85_15710 PF02798 Glutathione S-transferase, N-terminal domain A4U85_15715 PF05198 Translation initiation factor IF-3, N-terminal domain A4U85_15715 PF00707 Translation initiation factor IF-3, C-terminal domain A4U85_15720 PF02824 TGS domain A4U85_15720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4U85_15720 PF03129 Anticodon binding domain A4U85_15720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A4U85_15725 PF00501 AMP-binding enzyme A4U85_15725 PF13193 AMP-binding enzyme C-terminal domain A4U85_15730 PF04751 Protein of unknown function (DUF615) A4U85_15735 PF00381 PTS HPr component phosphorylation site A4U85_15740 PF03668 P-loop ATPase protein family A4U85_15745 PF02569 Pantoate-beta-alanine ligase A4U85_15750 PF02548 Ketopantoate hydroxymethyltransferase A4U85_15755 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A4U85_15760 PF12627 Probable RNA and SrmB- binding site of polymerase A A4U85_15760 PF12626 Polymerase A arginine-rich C-terminus A4U85_15760 PF01743 Poly A polymerase head domain A4U85_15770 PF03819 MazG nucleotide pyrophosphohydrolase domain A4U85_15780 PF04607 Region found in RelA / SpoT proteins A4U85_15780 PF02824 TGS domain A4U85_15780 PF13291 ACT domain A4U85_15785 PF05958 tRNA (Uracil-5-)-methyltransferase A4U85_15795 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_15800 PF00072 Response regulator receiver domain A4U85_15800 PF00672 HAMP domain A4U85_15800 PF01627 Hpt domain A4U85_15800 PF00512 His Kinase A (phospho-acceptor) domain A4U85_15800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_15800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A4U85_15805 PF00378 Enoyl-CoA hydratase/isomerase A4U85_15810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A4U85_15810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A4U85_15815 PF01261 Xylose isomerase-like TIM barrel A4U85_15825 PF00106 short chain dehydrogenase A4U85_15830 PF02233 NAD(P) transhydrogenase beta subunit A4U85_15835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A4U85_15840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A4U85_15840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A4U85_15845 PF00892 EamA-like transporter family A4U85_15855 PF07690 Major Facilitator Superfamily A4U85_15860 PF01207 Dihydrouridine synthase (Dus) A4U85_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_15870 PF03466 LysR substrate binding domain A4U85_15875 PF00899 ThiF family A4U85_15885 PF00694 Aconitase C-terminal domain A4U85_15885 PF00330 Aconitase family (aconitate hydratase) A4U85_15890 PF01026 TatD related DNase A4U85_15905 PF16658 Class II release factor RF3, C-terminal domain A4U85_15905 PF00009 Elongation factor Tu GTP binding domain A4U85_15905 PF03144 Elongation factor Tu domain 2 A4U85_15925 PF03707 Bacterial signalling protein N terminal repeat A4U85_15925 PF00990 Diguanylate cyclase, GGDEF domain A4U85_15925 PF00563 EAL domain A4U85_15930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A4U85_15930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A4U85_15935 PF10369 Small subunit of acetolactate synthase A4U85_15940 PF00205 Thiamine pyrophosphate enzyme, central domain A4U85_15940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4U85_15940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4U85_15950 PF09334 tRNA synthetases class I (M) A4U85_15950 PF00133 tRNA synthetases class I (I, L, M and V) A4U85_15950 PF13603 Leucyl-tRNA synthetase, Domain 2 A4U85_15950 PF08264 Anticodon-binding domain of tRNA A4U85_15965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4U85_15970 PF12704 MacB-like periplasmic core domain A4U85_15970 PF00005 ABC transporter A4U85_15970 PF02687 FtsX-like permease family A4U85_15975 PF02321 Outer membrane efflux protein A4U85_15990 PF00929 Exonuclease A4U85_15995 PF03193 RsgA GTPase A4U85_16005 PF00462 Glutaredoxin A4U85_16010 PF02556 Preprotein translocase subunit SecB A4U85_16020 PF01926 50S ribosome-binding GTPase A4U85_16020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A4U85_16025 PF13360 PQQ-like domain A4U85_16035 PF13393 Histidyl-tRNA synthetase A4U85_16035 PF03129 Anticodon binding domain A4U85_16040 PF04551 GcpE protein A4U85_16045 PF13464 Domain of unknown function (DUF4115) A4U85_16055 PF04055 Radical SAM superfamily A4U85_16060 PF00334 Nucleoside diphosphate kinase A4U85_16065 PF04384 Iron-sulphur cluster assembly A4U85_16070 PF01569 PAP2 superfamily A4U85_16075 PF00534 Glycosyl transferases group 1 A4U85_16075 PF13439 Glycosyltransferase Family 4 A4U85_16080 PF11818 C-terminal domain of tail specific protease (DUF3340) A4U85_16080 PF03572 Peptidase family S41 A4U85_16080 PF17804 Tail specific protease N-terminal domain A4U85_16080 PF00595 PDZ domain A4U85_16085 PF00933 Glycosyl hydrolase family 3 N terminal domain A4U85_16095 PF00561 alpha/beta hydrolase fold A4U85_16100 PF00171 Aldehyde dehydrogenase family A4U85_16105 PF00171 Aldehyde dehydrogenase family A4U85_16110 PF01202 Shikimate kinase A4U85_16115 PF02447 GntP family permease A4U85_16120 PF01081 KDPG and KHG aldolase A4U85_16125 PF00920 Dehydratase family A4U85_16130 PF00871 Acetokinase family A4U85_16135 PF07085 DRTGG domain A4U85_16135 PF01515 Phosphate acetyl/butaryl transferase A4U85_16140 PF05683 Fumarase C-terminus A4U85_16140 PF05681 Fumarate hydratase (Fumerase) A4U85_16155 PF07724 AAA domain (Cdc48 subfamily) A4U85_16155 PF06689 ClpX C4-type zinc finger A4U85_16155 PF10431 C-terminal, D2-small domain, of ClpB protein A4U85_16160 PF00574 Clp protease A4U85_16165 PF05697 Bacterial trigger factor protein (TF) A4U85_16165 PF05698 Bacterial trigger factor protein (TF) C-terminus A4U85_16165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U85_16170 PF00593 TonB dependent receptor A4U85_16170 PF07715 TonB-dependent Receptor Plug Domain A4U85_16175 PF13640 2OG-Fe(II) oxygenase superfamily A4U85_16175 PF18331 PKHD-type hydroxylase C-terminal domain A4U85_16180 PF00682 HMGL-like A4U85_16180 PF08502 LeuA allosteric (dimerisation) domain A4U85_16185 PF00561 alpha/beta hydrolase fold A4U85_16190 PF00561 alpha/beta hydrolase fold A4U85_16190 PF07021 Methionine biosynthesis protein MetW A4U85_16200 PF01725 Ham1 family A4U85_16210 PF02416 mttA/Hcf106 family A4U85_16215 PF02416 mttA/Hcf106 family A4U85_16220 PF00902 Sec-independent protein translocase protein (TatC) A4U85_16285 PF01790 Prolipoprotein diacylglyceryl transferase A4U85_16300 PF00303 Thymidylate synthase A4U85_16305 PF00186 Dihydrofolate reductase A4U85_16315 PF01625 Peptide methionine sulfoxide reductase A4U85_16325 PF01618 MotA/TolQ/ExbB proton channel family A4U85_16335 PF01842 ACT domain A4U85_16335 PF00551 Formyl transferase A4U85_16345 PF00171 Aldehyde dehydrogenase family A4U85_16350 PF00830 Ribosomal L28 family A4U85_16355 PF00471 Ribosomal protein L33 A4U85_16360 PF02254 TrkA-N domain A4U85_16360 PF00999 Sodium/hydrogen exchanger family A4U85_16380 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) A4U85_16385 PF00580 UvrD/REP helicase N-terminal domain A4U85_16385 PF13361 UvrD-like helicase C-terminal domain A4U85_16400 PF01396 Topoisomerase DNA binding C4 zinc finger A4U85_16400 PF01751 Toprim domain A4U85_16400 PF01131 DNA topoisomerase A4U85_16400 PF08272 Topoisomerase I zinc-ribbon-like A4U85_16410 PF01638 HxlR-like helix-turn-helix A4U85_16415 PF00107 Zinc-binding dehydrogenase A4U85_16415 PF08240 Alcohol dehydrogenase GroES-like domain A4U85_16430 PF01810 LysE type translocator A4U85_16435 PF03279 Bacterial lipid A biosynthesis acyltransferase A4U85_16445 PF00375 Sodium:dicarboxylate symporter family A4U85_16455 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4U85_16455 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4U85_16475 PF01416 tRNA pseudouridine synthase A4U85_16485 PF01176 Translation initiation factor 1A / IF-1 A4U85_16500 PF00180 Isocitrate/isopropylmalate dehydrogenase A4U85_16510 PF00694 Aconitase C-terminal domain A4U85_16515 PF00330 Aconitase family (aconitate hydratase) A4U85_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_16525 PF03466 LysR substrate binding domain A4U85_16545 PF00293 NUDIX domain A4U85_16550 PF01590 GAF domain A4U85_16550 PF02896 PEP-utilising enzyme, TIM barrel domain A4U85_16550 PF00391 PEP-utilising enzyme, mobile domain A4U85_16550 PF05524 PEP-utilising enzyme, N-terminal A4U85_16555 PF00141 Peroxidase A4U85_16560 PF12706 Beta-lactamase superfamily domain A4U85_16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_16565 PF03466 LysR substrate binding domain A4U85_16575 PF02798 Glutathione S-transferase, N-terminal domain A4U85_16580 PF08279 HTH domain A4U85_16580 PF13280 WYL domain A4U85_16585 PF13419 Haloacid dehalogenase-like hydrolase A4U85_16590 PF01479 S4 domain A4U85_16590 PF00849 RNA pseudouridylate synthase A4U85_16595 PF12111 Polyribonucleotide phosphorylase C terminal A4U85_16595 PF00575 S1 RNA binding domain A4U85_16595 PF10150 Ribonuclease E/G family A4U85_16600 PF13193 AMP-binding enzyme C-terminal domain A4U85_16600 PF00501 AMP-binding enzyme A4U85_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_16615 PF03466 LysR substrate binding domain A4U85_16620 PF00106 short chain dehydrogenase A4U85_16625 PF06969 HemN C-terminal domain A4U85_16625 PF04055 Radical SAM superfamily A4U85_16635 PF01554 MatE A4U85_16640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A4U85_16640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_16640 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_16650 PF03109 ABC1 family A4U85_16655 PF01197 Ribosomal protein L31 A4U85_16665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A4U85_16685 PF03884 DNA gyrase inhibitor YacG A4U85_16690 PF00753 Metallo-beta-lactamase superfamily A4U85_16695 PF00762 Ferrochelatase A4U85_16705 PF01177 Asp/Glu/Hydantoin racemase A4U85_16720 PF01206 Sulfurtransferase TusA A4U85_16725 PF03471 Transporter associated domain A4U85_16725 PF00571 CBS domain A4U85_16730 PF00795 Carbon-nitrogen hydrolase A4U85_16735 PF01588 Putative tRNA binding domain A4U85_16745 PF08334 Type II secretion system (T2SS), protein G A4U85_16745 PF07963 Prokaryotic N-terminal methylation motif A4U85_16750 PF00482 Type II secretion system (T2SS), protein F A4U85_16755 PF18074 Primosomal protein N C-terminal domain A4U85_16755 PF00271 Helicase conserved C-terminal domain A4U85_16755 PF17764 3′ DNA-binding domain (3′BD) A4U85_16755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A4U85_16755 PF00270 DEAD/DEAH box helicase A4U85_16760 PF02254 TrkA-N domain A4U85_16760 PF00999 Sodium/hydrogen exchanger family A4U85_16765 PF01430 Hsp33 protein A4U85_16775 PF00226 DnaJ domain A4U85_16775 PF01556 DnaJ C terminal domain A4U85_16785 PF01544 CorA-like Mg2+ transporter protein A4U85_16790 PF03725 3' exoribonuclease family, domain 2 A4U85_16790 PF01138 3' exoribonuclease family, domain 1 A4U85_16790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A4U85_16790 PF00013 KH domain A4U85_16790 PF00575 S1 RNA binding domain A4U85_16795 PF00312 Ribosomal protein S15 A4U85_16805 PF13538 UvrD-like helicase C-terminal domain A4U85_16810 PF12705 PD-(D/E)XK nuclease superfamily A4U85_16810 PF13361 UvrD-like helicase C-terminal domain A4U85_16810 PF00580 UvrD/REP helicase N-terminal domain A4U85_16815 PF17946 RecC C-terminal domain A4U85_16825 PF03976 Polyphosphate kinase 2 (PPK2) A4U85_16835 PF01209 ubiE/COQ5 methyltransferase family A4U85_16845 PF03109 ABC1 family A4U85_16850 PF01494 FAD binding domain A4U85_16855 PF01502 Phosphoribosyl-AMP cyclohydrolase A4U85_16870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A4U85_16870 PF00361 Proton-conducting membrane transporter A4U85_16870 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter A4U85_16870 PF13244 Domain of unknown function (DUF4040) A4U85_16875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A4U85_16880 PF00361 Proton-conducting membrane transporter A4U85_16890 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A4U85_16900 PF02033 Ribosome-binding factor A A4U85_16905 PF04760 Translation initiation factor IF-2, N-terminal region A4U85_16905 PF08364 Bacterial translation initiation factor IF-2 associated region A4U85_16905 PF11987 Translation-initiation factor 2 A4U85_16905 PF00009 Elongation factor Tu GTP binding domain A4U85_16910 PF08529 NusA N-terminal domain A4U85_16910 PF00575 S1 RNA binding domain A4U85_16910 PF13184 NusA-like KH domain A4U85_16915 PF17384 RimP C-terminal SH3 domain A4U85_16915 PF02576 RimP N-terminal domain A4U85_16930 PF03840 Preprotein translocase SecG subunit A4U85_16935 PF00121 Triosephosphate isomerase A4U85_16940 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A4U85_16940 PF00437 Type II/IV secretion system protein A4U85_16945 PF00482 Type II secretion system (T2SS), protein F A4U85_16950 PF06750 Bacterial Peptidase A24 N-terminal domain A4U85_16950 PF01478 Type IV leader peptidase family A4U85_16955 PF01121 Dephospho-CoA kinase A4U85_16965 PF08032 RNA 2'-O ribose methyltransferase substrate binding A4U85_16965 PF00588 SpoU rRNA Methylase family A4U85_16970 PF06865 Pyrimidine/purine nucleoside phosphorylase A4U85_16980 PF02463 RecF/RecN/SMC N terminal domain A4U85_16985 PF02622 Uncharacterized ACR, COG1678 A4U85_16990 PF03652 Holliday junction resolvase A4U85_16995 PF13533 Biotin-lipoyl like A4U85_17020 PF02805 Metal binding domain of Ada A4U85_17020 PF12833 Helix-turn-helix domain A4U85_17020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A4U85_17020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4U85_17025 PF01066 CDP-alcohol phosphatidyltransferase A4U85_17035 PF02151 UvrB/uvrC motif A4U85_17035 PF01541 GIY-YIG catalytic domain A4U85_17035 PF08459 UvrC Helix-hairpin-helix N-terminal A4U85_17055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A4U85_17055 PF00378 Enoyl-CoA hydratase/isomerase A4U85_17055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A4U85_17060 PF02803 Thiolase, C-terminal domain A4U85_17060 PF00108 Thiolase, N-terminal domain A4U85_17075 PF09278 MerR, DNA binding A4U85_17075 PF00376 MerR family regulatory protein A4U85_17085 PF01323 DSBA-like thioredoxin domain A4U85_17100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_17100 PF00183 Hsp90 protein A4U85_17115 PF13726 Na+-H+ antiporter family A4U85_17115 PF03553 Na+/H+ antiporter family A4U85_17140 PF04997 RNA polymerase Rpb1, domain 1 A4U85_17140 PF00623 RNA polymerase Rpb1, domain 2 A4U85_17140 PF04983 RNA polymerase Rpb1, domain 3 A4U85_17140 PF05000 RNA polymerase Rpb1, domain 4 A4U85_17140 PF04998 RNA polymerase Rpb1, domain 5 A4U85_17145 PF04565 RNA polymerase Rpb2, domain 3 A4U85_17145 PF10385 RNA polymerase beta subunit external 1 domain A4U85_17145 PF00562 RNA polymerase Rpb2, domain 6 A4U85_17145 PF04563 RNA polymerase beta subunit A4U85_17145 PF04561 RNA polymerase Rpb2, domain 2 A4U85_17145 PF04560 RNA polymerase Rpb2, domain 7 A4U85_17150 PF00542 Ribosomal protein L7/L12 C-terminal domain A4U85_17150 PF16320 Ribosomal protein L7/L12 dimerisation domain A4U85_17155 PF00466 Ribosomal protein L10 A4U85_17160 PF00687 Ribosomal protein L1p/L10e family A4U85_17165 PF03946 Ribosomal protein L11, N-terminal domain A4U85_17165 PF00298 Ribosomal protein L11, RNA binding domain A4U85_17170 PF02357 Transcription termination factor nusG A4U85_17170 PF00467 KOW motif A4U85_17175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A4U85_17185 PF03143 Elongation factor Tu C-terminal domain A4U85_17185 PF03144 Elongation factor Tu domain 2 A4U85_17185 PF00009 Elongation factor Tu GTP binding domain A4U85_17210 PF00425 chorismate binding enzyme A4U85_17210 PF04715 Anthranilate synthase component I, N terminal region A4U85_17215 PF13419 Haloacid dehalogenase-like hydrolase A4U85_17220 PF00498 FHA domain A4U85_17220 PF12401 Protein of unknown function (DUF2662) A4U85_17225 PF03958 Bacterial type II/III secretion system short domain A4U85_17225 PF00263 Bacterial type II and III secretion system protein A4U85_17240 PF00816 H-NS histone family A4U85_17265 PF03900 Porphobilinogen deaminase, C-terminal domain A4U85_17265 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A4U85_17270 PF04397 LytTr DNA-binding domain A4U85_17270 PF00072 Response regulator receiver domain A4U85_17275 PF06580 Histidine kinase A4U85_17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_17275 PF07694 5TMR of 5TMR-LYT A4U85_17280 PF00206 Lyase A4U85_17280 PF14698 Argininosuccinate lyase C-terminal A4U85_17285 PF04362 Bacterial Fe(2+) trafficking A4U85_17290 PF01895 PhoU domain A4U85_17295 PF02321 Outer membrane efflux protein A4U85_17300 PF00892 EamA-like transporter family A4U85_17315 PF13667 ThiC-associated domain A4U85_17315 PF01964 Radical SAM ThiC family A4U85_17320 PF00293 NUDIX domain A4U85_17325 PF00149 Calcineurin-like phosphoesterase A4U85_17330 PF01258 Prokaryotic dksA/traR C4-type zinc finger A4U85_17335 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4U85_17340 PF01098 Cell cycle protein A4U85_17345 PF02875 Mur ligase family, glutamate ligase domain A4U85_17345 PF08245 Mur ligase middle domain A4U85_17355 PF07664 Ferrous iron transport protein B C terminus A4U85_17355 PF02421 Ferrous iron transport protein B A4U85_17355 PF07670 Nucleoside recognition A4U85_17365 PF00589 Phage integrase family A4U85_17365 PF02899 Phage integrase, N-terminal SAM-like domain A4U85_17370 PF10411 Disulfide bond isomerase protein N-terminus A4U85_17370 PF13098 Thioredoxin-like domain A4U85_17375 PF03447 Homoserine dehydrogenase, NAD binding domain A4U85_17375 PF00742 Homoserine dehydrogenase A4U85_17375 PF01842 ACT domain A4U85_17380 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_17385 PF00768 D-alanyl-D-alanine carboxypeptidase A4U85_17390 PF00196 Bacterial regulatory proteins, luxR family A4U85_17390 PF00072 Response regulator receiver domain A4U85_17395 PF00512 His Kinase A (phospho-acceptor) domain A4U85_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4U85_17400 PF00072 Response regulator receiver domain A4U85_17400 PF02954 Bacterial regulatory protein, Fis family A4U85_17400 PF00158 Sigma-54 interaction domain A4U85_17405 PF03572 Peptidase family S41 A4U85_17405 PF00595 PDZ domain A4U85_17410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A4U85_17410 PF01676 Metalloenzyme superfamily A4U85_17415 PF03739 Lipopolysaccharide export system permease LptF/LptG A4U85_17425 PF02789 Cytosol aminopeptidase family, N-terminal domain A4U85_17425 PF00883 Cytosol aminopeptidase family, catalytic domain A4U85_17445 PF00677 Lumazine binding domain A4U85_17455 PF01872 RibD C-terminal domain A4U85_17455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A4U85_17460 PF03477 ATP cone domain A4U85_17465 PF00909 Ammonium Transporter Family A4U85_17470 PF00543 Nitrogen regulatory protein P-II A4U85_17480 PF01078 Magnesium chelatase, subunit ChlI A4U85_17480 PF13335 Magnesium chelatase, subunit ChlI C-terminal A4U85_17485 PF00155 Aminotransferase class I and II A4U85_17485 PF00392 Bacterial regulatory proteins, gntR family A4U85_17495 PF00701 Dihydrodipicolinate synthetase family A4U85_17505 PF03573 outer membrane porin, OprD family A4U85_17510 PF00719 Inorganic pyrophosphatase A4U85_17525 PF13193 AMP-binding enzyme C-terminal domain A4U85_17525 PF00501 AMP-binding enzyme A4U85_17530 PF00521 DNA gyrase/topoisomerase IV, subunit A A4U85_17530 PF03989 DNA gyrase C-terminal domain, beta-propeller A4U85_17535 PF07690 Major Facilitator Superfamily A4U85_17540 PF03458 UPF0126 domain A4U85_17545 PF02810 SEC-C motif A4U85_17550 PF03741 Integral membrane protein TerC family A4U85_17550 PF03471 Transporter associated domain A4U85_17555 PF03641 Possible lysine decarboxylase A4U85_17560 PF07690 Major Facilitator Superfamily A4U85_17570 PF11799 impB/mucB/samB family C-terminal domain A4U85_17570 PF00817 impB/mucB/samB family A4U85_17570 PF11798 IMS family HHH motif A4U85_17585 PF11842 Domain of unknown function (DUF3362) A4U85_17585 PF04055 Radical SAM superfamily A4U85_17585 PF08497 Radical SAM N-terminal A4U85_17605 PF03358 NADPH-dependent FMN reductase A4U85_17615 PF00291 Pyridoxal-phosphate dependent enzyme A4U85_17650 PF00440 Bacterial regulatory proteins, tetR family A4U85_17675 PF01327 Polypeptide deformylase A4U85_17685 PF17782 DprA winged helix domain A4U85_17685 PF02481 DNA recombination-mediator protein A A4U85_17690 PF01300 Telomere recombination A4U85_17695 PF00892 EamA-like transporter family A4U85_17700 PF00440 Bacterial regulatory proteins, tetR family A4U85_17705 PF07690 Major Facilitator Superfamily A4U85_17715 PF00255 Glutathione peroxidase A4U85_17725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A4U85_17730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U85_17730 PF02874 ATP synthase alpha/beta family, beta-barrel domain A4U85_17735 PF00231 ATP synthase A4U85_17740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4U85_17740 PF00306 ATP synthase alpha/beta chain, C terminal domain A4U85_17740 PF02874 ATP synthase alpha/beta family, beta-barrel domain A4U85_17745 PF00213 ATP synthase delta (OSCP) subunit A4U85_17750 PF00430 ATP synthase B/B' CF(0) A4U85_17755 PF00137 ATP synthase subunit C A4U85_17760 PF00119 ATP synthase A chain A4U85_17780 PF00005 ABC transporter A4U85_17785 PF00950 ABC 3 transport family A4U85_17790 PF01810 LysE type translocator A4U85_17795 PF04261 Dyp-type peroxidase family A4U85_17800 PF00390 Malic enzyme, N-terminal domain A4U85_17800 PF03949 Malic enzyme, NAD binding domain A4U85_17805 PF05746 DALR anticodon binding domain A4U85_17805 PF03485 Arginyl tRNA synthetase N terminal domain A4U85_17805 PF00750 tRNA synthetases class I (R) A4U85_17825 PF02678 Pirin A4U85_17825 PF05726 Pirin C-terminal cupin domain A4U85_17835 PF03551 Transcriptional regulator PadR-like family A4U85_17840 PF13427 Domain of unknown function (DUF4111) A4U85_17840 PF01909 Nucleotidyltransferase domain A4U85_17845 PF00117 Glutamine amidotransferase class-I A4U85_17845 PF02540 NAD synthase A4U85_17845 PF00958 GMP synthase C terminal domain A4U85_17850 PF04286 Protein of unknown function (DUF445) A4U85_17855 PF07681 DoxX A4U85_17860 PF09335 SNARE associated Golgi protein A4U85_17875 PF13614 AAA domain A4U85_17885 PF01722 BolA-like protein A4U85_17900 PF01648 4'-phosphopantetheinyl transferase superfamily A4U85_17905 PF12697 Alpha/beta hydrolase family A4U85_17920 PF13193 AMP-binding enzyme C-terminal domain A4U85_17920 PF00975 Thioesterase domain A4U85_17920 PF00501 AMP-binding enzyme A4U85_17920 PF00668 Condensation domain A4U85_17920 PF00550 Phosphopantetheine attachment site A4U85_17925 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U85_17925 PF14765 Polyketide synthase dehydratase A4U85_17925 PF00501 AMP-binding enzyme A4U85_17925 PF13193 AMP-binding enzyme C-terminal domain A4U85_17925 PF00668 Condensation domain A4U85_17925 PF16197 Ketoacyl-synthetase C-terminal extension A4U85_17925 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U85_17925 PF00550 Phosphopantetheine attachment site A4U85_17925 PF08659 KR domain A4U85_17930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_17930 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_17930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_17935 PF00501 AMP-binding enzyme A4U85_17940 PF03472 Autoinducer binding domain A4U85_17940 PF00196 Bacterial regulatory proteins, luxR family A4U85_17950 PF00765 Autoinducer synthase A4U85_17955 PF07690 Major Facilitator Superfamily A4U85_17955 PF00083 Sugar (and other) transporter A4U85_17960 PF00378 Enoyl-CoA hydratase/isomerase A4U85_17965 PF00378 Enoyl-CoA hydratase/isomerase A4U85_17970 PF02770 Acyl-CoA dehydrogenase, middle domain A4U85_17970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A4U85_17970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A4U85_17975 PF00501 AMP-binding enzyme A4U85_17975 PF13193 AMP-binding enzyme C-terminal domain A4U85_17980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A4U85_17980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A4U85_17985 PF00171 Aldehyde dehydrogenase family A4U85_17995 PF00324 Amino acid permease A4U85_18000 PF00324 Amino acid permease A4U85_18005 PF01042 Endoribonuclease L-PSP A4U85_18010 PF01168 Alanine racemase, N-terminal domain A4U85_18010 PF00842 Alanine racemase, C-terminal domain A4U85_18015 PF01266 FAD dependent oxidoreductase A4U85_18020 PF01037 Lrp/AsnC ligand binding domain A4U85_18030 PF00593 TonB dependent receptor A4U85_18030 PF07715 TonB-dependent Receptor Plug Domain A4U85_18045 PF00849 RNA pseudouridylate synthase A4U85_18085 PF02801 Beta-ketoacyl synthase, C-terminal domain A4U85_18085 PF00109 Beta-ketoacyl synthase, N-terminal domain A4U85_18120 PF00694 Aconitase C-terminal domain A4U85_18120 PF00330 Aconitase family (aconitate hydratase) A4U85_18125 PF00285 Citrate synthase, C-terminal domain A4U85_18135 PF00392 Bacterial regulatory proteins, gntR family A4U85_18135 PF07729 FCD domain A4U85_18140 PF00155 Aminotransferase class I and II A4U85_18145 PF01565 FAD binding domain A4U85_18145 PF09330 D-lactate dehydrogenase, membrane binding A4U85_18150 PF01070 FMN-dependent dehydrogenase A4U85_18155 PF07729 FCD domain A4U85_18155 PF00392 Bacterial regulatory proteins, gntR family A4U85_18160 PF02652 L-lactate permease A4U85_18165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U85_18165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U85_18165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U85_18165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U85_18170 PF16363 GDP-mannose 4,6 dehydratase A4U85_18175 PF00342 Phosphoglucose isomerase A4U85_18180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A4U85_18180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A4U85_18180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A4U85_18185 PF00483 Nucleotidyl transferase A4U85_18190 PF02397 Bacterial sugar transferase A4U85_18195 PF00535 Glycosyl transferase family 2 A4U85_18200 PF00534 Glycosyl transferases group 1 A4U85_18215 PF13439 Glycosyltransferase Family 4 A4U85_18215 PF00534 Glycosyl transferases group 1 A4U85_18220 PF12464 Maltose acetyltransferase A4U85_18220 PF14602 Hexapeptide repeat of succinyl-transferase A4U85_18220 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_18230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A4U85_18235 PF00132 Bacterial transferase hexapeptide (six repeats) A4U85_18240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4U85_18240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A4U85_18245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A4U85_18245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A4U85_18245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A4U85_18250 PF02563 Polysaccharide biosynthesis/export protein A4U85_18250 PF10531 SLBB domain A4U85_18250 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A4U85_18255 PF01451 Low molecular weight phosphotyrosine protein phosphatase A4U85_18260 PF02706 Chain length determinant protein A4U85_18260 PF13807 G-rich domain on putative tyrosine kinase A4U85_18260 PF13614 AAA domain A4U85_18265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U85_18265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4U85_18270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4U85_18270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U85_18275 PF03023 Lipid II flippase MurJ A4U85_18280 PF01510 N-acetylmuramoyl-L-alanine amidase A4U85_18285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A4U85_18285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A4U85_18295 PF05506 Domain of unknown function (DUF756) A4U85_18295 PF04185 Phosphoesterase family A4U85_18390 PF02796 Helix-turn-helix domain of resolvase A4U85_18390 PF00239 Resolvase, N terminal domain A4U85_18395 PF02661 Fic/DOC family A4U85_18410 PF00809 Pterin binding enzyme A4U85_18415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4U85_18415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4U85_18415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4U85_18415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4U85_18430 PF00239 Resolvase, N terminal domain A4U85_18430 PF02796 Helix-turn-helix domain of resolvase A4U85_18440 PF03358 NADPH-dependent FMN reductase A4U85_18450 PF01758 Sodium Bile acid symporter family A4U85_18540 PF03725 3' exoribonuclease family, domain 2 A4U85_18540 PF01138 3' exoribonuclease family, domain 1 A4U85_18545 PF00487 Fatty acid desaturase A4U85_18550 PF00175 Oxidoreductase NAD-binding domain A4U85_18555 PF00440 Bacterial regulatory proteins, tetR family A4U85_18560 PF08360 QacR-like protein, C-terminal region A4U85_18560 PF00440 Bacterial regulatory proteins, tetR family A4U85_18565 PF01323 DSBA-like thioredoxin domain A4U85_18575 PF13419 Haloacid dehalogenase-like hydrolase A4U85_18580 PF00106 short chain dehydrogenase A4U85_18595 PF00583 Acetyltransferase (GNAT) family A4U85_18595 PF00696 Amino acid kinase family A4U85_18600 PF09084 NMT1/THI5 like A4U85_18605 PF09084 NMT1/THI5 like A4U85_18610 PF00296 Luciferase-like monooxygenase A4U85_18615 PF00528 Binding-protein-dependent transport system inner membrane component A4U85_18620 PF00005 ABC transporter A4U85_18625 PF00440 Bacterial regulatory proteins, tetR family A4U85_18625 PF08362 YcdC-like protein, C-terminal region A4U85_18630 PF01048 Phosphorylase superfamily A4U85_18640 PF01687 Riboflavin kinase A4U85_18640 PF06574 FAD synthetase A4U85_18645 PF08264 Anticodon-binding domain of tRNA A4U85_18645 PF00133 tRNA synthetases class I (I, L, M and V) A4U85_18645 PF06827 Zinc finger found in FPG and IleRS A4U85_18650 PF01252 Signal peptidase (SPase) II A4U85_18655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4U85_18695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A4U85_18700 PF07859 alpha/beta hydrolase fold A4U85_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4U85_18720 PF03466 LysR substrate binding domain A4U85_18725 PF01025 GrpE A4U85_18730 PF00012 Hsp70 protein A4U85_18750 PF13406 Transglycosylase SLT domain A4U85_18755 PF02222 ATP-grasp domain A4U85_18755 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A4U85_18760 PF00731 AIR carboxylase A4U85_18770 PF01225 Mur ligase family, catalytic domain A4U85_18770 PF02875 Mur ligase family, glutamate ligase domain A4U85_18770 PF08245 Mur ligase middle domain A4U85_18780 PF01569 PAP2 superfamily A4U85_18785 PF03741 Integral membrane protein TerC family A4U85_18795 PF03738 Glutathionylspermidine synthase preATP-grasp A4U85_18800 PF00355 Rieske [2Fe-2S] domain A4U85_18805 PF01979 Amidohydrolase family A4U85_18815 PF00156 Phosphoribosyl transferase domain A4U85_18825 PF10411 Disulfide bond isomerase protein N-terminus A4U85_18825 PF13098 Thioredoxin-like domain A4U85_18830 PF16916 Dimerisation domain of Zinc Transporter A4U85_18830 PF01545 Cation efflux family A4U85_18835 PF02583 Metal-sensitive transcriptional repressor A4U85_18840 PF10396 GTP-binding protein TrmE N-terminus A4U85_18840 PF12631 MnmE helical domain A4U85_18840 PF01926 50S ribosome-binding GTPase A4U85_18845 PF14849 YidC periplasmic domain A4U85_18845 PF02096 60Kd inner membrane protein A4U85_18850 PF01809 Putative membrane protein insertion efficiency factor A4U85_18855 PF00825 Ribonuclease P A4U85_18860 PF00468 Ribosomal protein L34 A4U85_18870 PF02566 OsmC-like protein A4U85_18875 PF01047 MarR family A4U85_18890 PF03389 MobA/MobL family A4U85_18895 PF01051 Initiator Replication protein A4U85_18910 PF05973 Phage derived protein Gp49-like (DUF891)