locus-tag class description BSR55_00005 PF08299 Bacterial dnaA protein helix-turn-helix BSR55_00005 PF11638 DnaA N-terminal domain BSR55_00005 PF00308 Bacterial dnaA protein BSR55_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BSR55_00010 PF02767 DNA polymerase III beta subunit, central domain BSR55_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BSR55_00015 PF02463 RecF/RecN/SMC N terminal domain BSR55_00020 PF18053 DNA gyrase B subunit insert domain BSR55_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BSR55_00020 PF00204 DNA gyrase B BSR55_00020 PF01751 Toprim domain BSR55_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_00030 PF12848 ABC transporter BSR55_00030 PF00005 ABC transporter BSR55_00040 PF00579 tRNA synthetases class I (W and Y) BSR55_00045 PF03702 Anhydro-N-acetylmuramic acid kinase BSR55_00050 PF00561 alpha/beta hydrolase fold BSR55_00055 PF01521 Iron-sulphur cluster biosynthesis BSR55_00070 PF07859 alpha/beta hydrolase fold BSR55_00075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BSR55_00140 PF07724 AAA domain (Cdc48 subfamily) BSR55_00140 PF10431 C-terminal, D2-small domain, of ClpB protein BSR55_00140 PF17871 AAA lid domain BSR55_00140 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_00195 PF00691 OmpA family BSR55_00195 PF05736 OprF membrane domain BSR55_00215 PF17938 Tetracyclin repressor-like, C-terminal domain BSR55_00215 PF00440 Bacterial regulatory proteins, tetR family BSR55_00220 PF00005 ABC transporter BSR55_00225 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_00230 PF00296 Luciferase-like monooxygenase BSR55_00235 PF09084 NMT1/THI5 like BSR55_00240 PF09084 NMT1/THI5 like BSR55_00245 PF00696 Amino acid kinase family BSR55_00245 PF00583 Acetyltransferase (GNAT) family BSR55_00270 PF00106 short chain dehydrogenase BSR55_00275 PF13419 Haloacid dehalogenase-like hydrolase BSR55_00285 PF01323 DSBA-like thioredoxin domain BSR55_00295 PF00440 Bacterial regulatory proteins, tetR family BSR55_00300 PF00440 Bacterial regulatory proteins, tetR family BSR55_00305 PF00970 Oxidoreductase FAD-binding domain BSR55_00305 PF00042 Globin BSR55_00305 PF00175 Oxidoreductase NAD-binding domain BSR55_00310 PF00487 Fatty acid desaturase BSR55_00315 PF12833 Helix-turn-helix domain BSR55_00325 PF01138 3' exoribonuclease family, domain 1 BSR55_00325 PF03725 3' exoribonuclease family, domain 2 BSR55_00330 PF04185 Phosphoesterase family BSR55_00330 PF05506 Domain of unknown function (DUF756) BSR55_00345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BSR55_00345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BSR55_00350 PF01510 N-acetylmuramoyl-L-alanine amidase BSR55_00355 PF03023 Lipid II flippase MurJ BSR55_00360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BSR55_00360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSR55_00365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BSR55_00365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSR55_00370 PF13614 AAA domain BSR55_00370 PF13807 G-rich domain on putative tyrosine kinase BSR55_00370 PF02706 Chain length determinant protein BSR55_00375 PF01451 Low molecular weight phosphotyrosine protein phosphatase BSR55_00380 PF02563 Polysaccharide biosynthesis/export protein BSR55_00380 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BSR55_00380 PF10531 SLBB domain BSR55_00390 PF00535 Glycosyl transferase family 2 BSR55_00395 PF13439 Glycosyltransferase Family 4 BSR55_00395 PF00534 Glycosyl transferases group 1 BSR55_00405 PF02719 Polysaccharide biosynthesis protein BSR55_00405 PF08485 Polysaccharide biosynthesis protein C-terminal BSR55_00410 PF01370 NAD dependent epimerase/dehydratase family BSR55_00415 PF02350 UDP-N-acetylglucosamine 2-epimerase BSR55_00420 PF13579 Glycosyl transferase 4-like domain BSR55_00425 PF02397 Bacterial sugar transferase BSR55_00430 PF00483 Nucleotidyl transferase BSR55_00435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BSR55_00435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BSR55_00435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BSR55_00440 PF00342 Phosphoglucose isomerase BSR55_00445 PF16363 GDP-mannose 4,6 dehydratase BSR55_00450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSR55_00450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSR55_00450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSR55_00450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSR55_00460 PF00005 ABC transporter BSR55_00460 PF00664 ABC transporter transmembrane region BSR55_00470 PF00083 Sugar (and other) transporter BSR55_00475 PF00171 Aldehyde dehydrogenase family BSR55_00480 PF00158 Sigma-54 interaction domain BSR55_00485 PF00465 Iron-containing alcohol dehydrogenase BSR55_00490 PF00491 Arginase family BSR55_00500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_00500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_00505 PF00596 Class II Aldolase and Adducin N-terminal domain BSR55_00515 PF01614 Bacterial transcriptional regulator BSR55_00515 PF09339 IclR helix-turn-helix domain BSR55_00520 PF13378 Enolase C-terminal domain-like BSR55_00520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSR55_00525 PF03328 HpcH/HpaI aldolase/citrate lyase family BSR55_00530 PF00171 Aldehyde dehydrogenase family BSR55_00540 PF05336 L-rhamnose mutarotase BSR55_00545 PF06379 L-rhamnose-proton symport protein (RhaT) BSR55_00570 PF01722 BolA-like protein BSR55_00580 PF13614 AAA domain BSR55_00590 PF09335 SNARE associated Golgi protein BSR55_00595 PF07681 DoxX BSR55_00605 PF00117 Glutamine amidotransferase class-I BSR55_00605 PF00958 GMP synthase C terminal domain BSR55_00605 PF02540 NAD synthase BSR55_00620 PF03462 PCRF domain BSR55_00620 PF00472 RF-1 domain BSR55_00630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSR55_00635 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BSR55_00640 PF04452 RNA methyltransferase BSR55_00645 PF05552 Conserved TM helix BSR55_00645 PF00924 Mechanosensitive ion channel BSR55_00655 PF13193 AMP-binding enzyme C-terminal domain BSR55_00655 PF00501 AMP-binding enzyme BSR55_00655 PF16177 Acetyl-coenzyme A synthetase N-terminus BSR55_00660 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BSR55_00660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_00665 PF00144 Beta-lactamase BSR55_00670 PF00296 Luciferase-like monooxygenase BSR55_00675 PF03358 NADPH-dependent FMN reductase BSR55_00680 PF00196 Bacterial regulatory proteins, luxR family BSR55_00680 PF00072 Response regulator receiver domain BSR55_00685 PF07690 Major Facilitator Superfamily BSR55_00690 PF08497 Radical SAM N-terminal BSR55_00690 PF04055 Radical SAM superfamily BSR55_00690 PF11842 Domain of unknown function (DUF3362) BSR55_00710 PF06123 Inner membrane protein CreD BSR55_00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_00715 PF00512 His Kinase A (phospho-acceptor) domain BSR55_00715 PF00672 HAMP domain BSR55_00720 PF00486 Transcriptional regulatory protein, C terminal BSR55_00720 PF00072 Response regulator receiver domain BSR55_00730 PF03485 Arginyl tRNA synthetase N terminal domain BSR55_00730 PF05746 DALR anticodon binding domain BSR55_00730 PF00750 tRNA synthetases class I (R) BSR55_00750 PF00390 Malic enzyme, N-terminal domain BSR55_00750 PF03949 Malic enzyme, NAD binding domain BSR55_00755 PF04717 Type VI secretion system, phage-baseplate injector BSR55_00755 PF16671 Actin cross-linking domain BSR55_00775 PF04261 Dyp-type peroxidase family BSR55_00780 PF01810 LysE type translocator BSR55_00785 PF01810 LysE type translocator BSR55_00790 PF00950 ABC 3 transport family BSR55_00795 PF00005 ABC transporter BSR55_00815 PF00119 ATP synthase A chain BSR55_00820 PF00137 ATP synthase subunit C BSR55_00825 PF00430 ATP synthase B/B' CF(0) BSR55_00830 PF00213 ATP synthase delta (OSCP) subunit BSR55_00850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BSR55_00880 PF00255 Glutathione peroxidase BSR55_00895 PF07690 Major Facilitator Superfamily BSR55_00900 PF00440 Bacterial regulatory proteins, tetR family BSR55_00905 PF00892 EamA-like transporter family BSR55_00910 PF01300 Telomere recombination BSR55_00915 PF02481 DNA recombination-mediator protein A BSR55_00915 PF17782 DprA winged helix domain BSR55_00920 PF01476 LysM domain BSR55_00925 PF01327 Polypeptide deformylase BSR55_00935 PF07715 TonB-dependent Receptor Plug Domain BSR55_00935 PF00593 TonB dependent receptor BSR55_00955 PF00440 Bacterial regulatory proteins, tetR family BSR55_00990 PF07995 Glucose / Sorbosone dehydrogenase BSR55_01010 PF09456 RcsC Alpha-Beta-Loop (ABL) BSR55_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_01010 PF00512 His Kinase A (phospho-acceptor) domain BSR55_01010 PF00072 Response regulator receiver domain BSR55_01015 PF04341 Protein of unknown function, DUF485 BSR55_01020 PF00474 Sodium:solute symporter family BSR55_01030 PF02028 BCCT, betaine/carnitine/choline family transporter BSR55_01040 PF00905 Penicillin binding protein transpeptidase domain BSR55_01045 PF00990 Diguanylate cyclase, GGDEF domain BSR55_01055 PF17755 UvrA DNA-binding domain BSR55_01055 PF17760 UvrA interaction domain BSR55_01065 PF06942 GlpM protein BSR55_01070 PF03641 Possible lysine decarboxylase BSR55_01075 PF03471 Transporter associated domain BSR55_01075 PF03741 Integral membrane protein TerC family BSR55_01080 PF02810 SEC-C motif BSR55_01085 PF03458 UPF0126 domain BSR55_01095 PF07690 Major Facilitator Superfamily BSR55_01105 PF03989 DNA gyrase C-terminal domain, beta-propeller BSR55_01105 PF00521 DNA gyrase/topoisomerase IV, subunit A BSR55_01110 PF00501 AMP-binding enzyme BSR55_01110 PF13193 AMP-binding enzyme C-terminal domain BSR55_01125 PF00719 Inorganic pyrophosphatase BSR55_01130 PF03573 outer membrane porin, OprD family BSR55_01155 PF05199 GMC oxidoreductase BSR55_01155 PF05199 GMC oxidoreductase BSR55_01160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSR55_01160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSR55_01165 PF07690 Major Facilitator Superfamily BSR55_01170 PF02311 AraC-like ligand binding domain BSR55_01170 PF12833 Helix-turn-helix domain BSR55_01175 PF02595 Glycerate kinase family BSR55_01180 PF00311 Phosphoenolpyruvate carboxylase BSR55_01185 PF07690 Major Facilitator Superfamily BSR55_01195 PF00732 GMC oxidoreductase BSR55_01195 PF05199 GMC oxidoreductase BSR55_01210 PF00378 Enoyl-CoA hydratase/isomerase BSR55_01215 PF01144 Coenzyme A transferase BSR55_01220 PF00356 Bacterial regulatory proteins, lacI family BSR55_01225 PF02264 LamB porin BSR55_01230 PF13335 Magnesium chelatase, subunit ChlI C-terminal BSR55_01230 PF01078 Magnesium chelatase, subunit ChlI BSR55_01240 PF00543 Nitrogen regulatory protein P-II BSR55_01245 PF00909 Ammonium Transporter Family BSR55_01250 PF03477 ATP cone domain BSR55_01255 PF01872 RibD C-terminal domain BSR55_01255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BSR55_01260 PF02086 D12 class N6 adenine-specific DNA methyltransferase BSR55_01265 PF00677 Lumazine binding domain BSR55_01270 PF09335 SNARE associated Golgi protein BSR55_01275 PF08245 Mur ligase middle domain BSR55_01275 PF02875 Mur ligase family, glutamate ligase domain BSR55_01280 PF01098 Cell cycle protein BSR55_01285 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSR55_01290 PF01258 Prokaryotic dksA/traR C4-type zinc finger BSR55_01295 PF00149 Calcineurin-like phosphoesterase BSR55_01300 PF00293 NUDIX domain BSR55_01305 PF13667 ThiC-associated domain BSR55_01305 PF01964 Radical SAM ThiC family BSR55_01320 PF01895 PhoU domain BSR55_01325 PF01053 Cys/Met metabolism PLP-dependent enzyme BSR55_01335 PF00005 ABC transporter BSR55_01335 PF12848 ABC transporter BSR55_01345 PF00977 Histidine biosynthesis protein BSR55_01350 PF01636 Phosphotransferase enzyme family BSR55_01375 PF00977 Histidine biosynthesis protein BSR55_01395 PF00117 Glutamine amidotransferase class-I BSR55_01400 PF00475 Imidazoleglycerol-phosphate dehydratase BSR55_01430 PF00583 Acetyltransferase (GNAT) family BSR55_01435 PF00732 GMC oxidoreductase BSR55_01435 PF05199 GMC oxidoreductase BSR55_01440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BSR55_01440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BSR55_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_01445 PF00512 His Kinase A (phospho-acceptor) domain BSR55_01445 PF00672 HAMP domain BSR55_01450 PF00486 Transcriptional regulatory protein, C terminal BSR55_01450 PF00072 Response regulator receiver domain BSR55_01460 PF00575 S1 RNA binding domain BSR55_01460 PF09371 Tex-like protein N-terminal domain BSR55_01460 PF16921 Tex protein YqgF-like domain BSR55_01460 PF17674 HHH domain BSR55_01465 PF13411 MerR HTH family regulatory protein BSR55_01470 PF07993 Male sterility protein BSR55_01470 PF00550 Phosphopantetheine attachment site BSR55_01475 PF00106 short chain dehydrogenase BSR55_01480 PF03466 LysR substrate binding domain BSR55_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_01485 PF00106 short chain dehydrogenase BSR55_01500 PF02321 Outer membrane efflux protein BSR55_01510 PF00873 AcrB/AcrD/AcrF family BSR55_01520 PF01545 Cation efflux family BSR55_01565 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSR55_01590 PF01795 MraW methylase family BSR55_01600 PF00905 Penicillin binding protein transpeptidase domain BSR55_01600 PF03717 Penicillin-binding Protein dimerisation domain BSR55_01605 PF02875 Mur ligase family, glutamate ligase domain BSR55_01605 PF01225 Mur ligase family, catalytic domain BSR55_01605 PF08245 Mur ligase middle domain BSR55_01610 PF01225 Mur ligase family, catalytic domain BSR55_01610 PF02875 Mur ligase family, glutamate ligase domain BSR55_01610 PF08245 Mur ligase middle domain BSR55_01615 PF00953 Glycosyl transferase family 4 BSR55_01620 PF13847 Methyltransferase domain BSR55_01625 PF00905 Penicillin binding protein transpeptidase domain BSR55_01625 PF00912 Transglycosylase BSR55_01625 PF17092 Penicillin-binding protein OB-like domain BSR55_01650 PF00263 Bacterial type II and III secretion system protein BSR55_01650 PF03958 Bacterial type II/III secretion system short domain BSR55_01650 PF07660 Secretin and TonB N terminus short domain BSR55_01650 PF11741 AMIN domain BSR55_01655 PF01202 Shikimate kinase BSR55_01660 PF01761 3-dehydroquinate synthase BSR55_01670 PF01493 GXGXG motif BSR55_01670 PF01645 Conserved region in glutamate synthase BSR55_01670 PF04898 Glutamate synthase central domain BSR55_01670 PF00310 Glutamine amidotransferases class-II BSR55_01675 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_01675 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BSR55_01685 PF00677 Lumazine binding domain BSR55_01695 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BSR55_01705 PF00361 Proton-conducting membrane transporter BSR55_01710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSR55_01715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSR55_01715 PF13244 Domain of unknown function (DUF4040) BSR55_01715 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BSR55_01715 PF00361 Proton-conducting membrane transporter BSR55_01735 PF01502 Phosphoribosyl-AMP cyclohydrolase BSR55_01745 PF01494 FAD binding domain BSR55_01755 PF03109 ABC1 family BSR55_01765 PF01209 ubiE/COQ5 methyltransferase family BSR55_01775 PF03976 Polyphosphate kinase 2 (PPK2) BSR55_01790 PF17946 RecC C-terminal domain BSR55_01795 PF13361 UvrD-like helicase C-terminal domain BSR55_01795 PF00580 UvrD/REP helicase N-terminal domain BSR55_01795 PF12705 PD-(D/E)XK nuclease superfamily BSR55_01800 PF13538 UvrD-like helicase C-terminal domain BSR55_01815 PF00312 Ribosomal protein S15 BSR55_01820 PF01138 3' exoribonuclease family, domain 1 BSR55_01820 PF00013 KH domain BSR55_01820 PF00575 S1 RNA binding domain BSR55_01820 PF03725 3' exoribonuclease family, domain 2 BSR55_01820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BSR55_01825 PF01544 CorA-like Mg2+ transporter protein BSR55_01830 PF04325 Protein of unknown function (DUF465) BSR55_01840 PF00226 DnaJ domain BSR55_01840 PF01556 DnaJ C terminal domain BSR55_01850 PF01430 Hsp33 protein BSR55_01855 PF02254 TrkA-N domain BSR55_01855 PF00999 Sodium/hydrogen exchanger family BSR55_01885 PF00271 Helicase conserved C-terminal domain BSR55_01885 PF18074 Primosomal protein N C-terminal domain BSR55_01885 PF17764 3′ DNA-binding domain (3′BD) BSR55_01885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BSR55_01885 PF00270 DEAD/DEAH box helicase BSR55_01890 PF00482 Type II secretion system (T2SS), protein F BSR55_01895 PF07963 Prokaryotic N-terminal methylation motif BSR55_01895 PF08334 Type II secretion system (T2SS), protein G BSR55_01915 PF01588 Putative tRNA binding domain BSR55_01920 PF00795 Carbon-nitrogen hydrolase BSR55_01925 PF03471 Transporter associated domain BSR55_01925 PF00571 CBS domain BSR55_01930 PF01206 Sulfurtransferase TusA BSR55_01965 PF01177 Asp/Glu/Hydantoin racemase BSR55_01975 PF00762 Ferrochelatase BSR55_01980 PF00753 Metallo-beta-lactamase superfamily BSR55_01990 PF08042 PqqA family BSR55_01995 PF12706 Beta-lactamase superfamily domain BSR55_02000 PF03070 TENA/THI-4/PQQC family BSR55_02025 PF04055 Radical SAM superfamily BSR55_02025 PF13186 Iron-sulfur cluster-binding domain BSR55_02030 PF01244 Membrane dipeptidase (Peptidase family M19) BSR55_02035 PF03884 DNA gyrase inhibitor YacG BSR55_02065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BSR55_02070 PF01197 Ribosomal protein L31 BSR55_02075 PF03109 ABC1 family BSR55_02085 PF01554 MatE BSR55_02095 PF04055 Radical SAM superfamily BSR55_02095 PF06969 HemN C-terminal domain BSR55_02105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_02105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_02105 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSR55_02105 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_02115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BSR55_02115 PF01488 Shikimate / quinate 5-dehydrogenase BSR55_02115 PF08501 Shikimate dehydrogenase substrate binding domain BSR55_02130 PF06969 HemN C-terminal domain BSR55_02130 PF04055 Radical SAM superfamily BSR55_02135 PF00925 GTP cyclohydrolase II BSR55_02140 PF02780 Transketolase, C-terminal domain BSR55_02140 PF02779 Transketolase, pyrimidine binding domain BSR55_02140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BSR55_02145 PF00459 Inositol monophosphatase family BSR55_02150 PF00271 Helicase conserved C-terminal domain BSR55_02150 PF00270 DEAD/DEAH box helicase BSR55_02155 PF00005 ABC transporter BSR55_02160 PF02405 Permease MlaE BSR55_02165 PF02470 MlaD protein BSR55_02180 PF01544 CorA-like Mg2+ transporter protein BSR55_02185 PF03641 Possible lysine decarboxylase BSR55_02190 PF00293 NUDIX domain BSR55_02195 PF00156 Phosphoribosyl transferase domain BSR55_02200 PF00271 Helicase conserved C-terminal domain BSR55_02200 PF00270 DEAD/DEAH box helicase BSR55_02200 PF17191 RecG wedge domain BSR55_02210 PF01553 Acyltransferase BSR55_02220 PF00375 Sodium:dicarboxylate symporter family BSR55_02230 PF01926 50S ribosome-binding GTPase BSR55_02235 PF02082 Transcriptional regulator BSR55_02245 PF00970 Oxidoreductase FAD-binding domain BSR55_02245 PF00175 Oxidoreductase NAD-binding domain BSR55_02245 PF00042 Globin BSR55_02250 PF05872 Bacterial protein of unknown function (DUF853) BSR55_02260 PF00117 Glutamine amidotransferase class-I BSR55_02265 PF00338 Ribosomal protein S10p/S20e BSR55_02270 PF00297 Ribosomal protein L3 BSR55_02275 PF00573 Ribosomal protein L4/L1 family BSR55_02280 PF00276 Ribosomal protein L23 BSR55_02285 PF00181 Ribosomal Proteins L2, RNA binding domain BSR55_02285 PF03947 Ribosomal Proteins L2, C-terminal domain BSR55_02290 PF00203 Ribosomal protein S19 BSR55_02295 PF00237 Ribosomal protein L22p/L17e BSR55_02300 PF00189 Ribosomal protein S3, C-terminal domain BSR55_02300 PF07650 KH domain BSR55_02305 PF00252 Ribosomal protein L16p/L10e BSR55_02310 PF00831 Ribosomal L29 protein BSR55_02315 PF00366 Ribosomal protein S17 BSR55_02320 PF00238 Ribosomal protein L14p/L23e BSR55_02325 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BSR55_02325 PF00467 KOW motif BSR55_02330 PF00281 Ribosomal protein L5 BSR55_02330 PF00673 ribosomal L5P family C-terminus BSR55_02335 PF00253 Ribosomal protein S14p/S29e BSR55_02340 PF00410 Ribosomal protein S8 BSR55_02345 PF00347 Ribosomal protein L6 BSR55_02350 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BSR55_02355 PF03719 Ribosomal protein S5, C-terminal domain BSR55_02355 PF00333 Ribosomal protein S5, N-terminal domain BSR55_02360 PF00327 Ribosomal protein L30p/L7e BSR55_02365 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BSR55_02370 PF00344 SecY translocase BSR55_02375 PF00444 Ribosomal protein L36 BSR55_02380 PF00416 Ribosomal protein S13/S18 BSR55_02385 PF00411 Ribosomal protein S11 BSR55_02390 PF00163 Ribosomal protein S4/S9 N-terminal domain BSR55_02390 PF01479 S4 domain BSR55_02395 PF01000 RNA polymerase Rpb3/RpoA insert domain BSR55_02395 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BSR55_02395 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BSR55_02400 PF01196 Ribosomal protein L17 BSR55_02405 PF00743 Flavin-binding monooxygenase-like BSR55_02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_02410 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_02415 PF03937 Flavinator of succinate dehydrogenase BSR55_02455 PF09526 Probable metal-binding protein (DUF2387) BSR55_02460 PF01432 Peptidase family M3 BSR55_02475 PF17876 Cold shock domain BSR55_02475 PF00773 RNB domain BSR55_02475 PF08461 Ribonuclease R winged-helix domain BSR55_02475 PF00575 S1 RNA binding domain BSR55_02475 PF08206 Ribonuclease B OB domain BSR55_02510 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_02515 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_02520 PF00005 ABC transporter BSR55_02525 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSR55_02530 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSR55_02535 PF01638 HxlR-like helix-turn-helix BSR55_02540 PF07690 Major Facilitator Superfamily BSR55_02565 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSR55_02590 PF00892 EamA-like transporter family BSR55_02595 PF03631 Virulence factor BrkB BSR55_02600 PF03358 NADPH-dependent FMN reductase BSR55_02645 PF12796 Ankyrin repeats (3 copies) BSR55_02655 PF01062 Bestrophin, RFP-TM, chloride channel BSR55_02660 PF04002 RadC-like JAB domain BSR55_02665 PF04127 DNA / pantothenate metabolism flavoprotein BSR55_02665 PF02441 Flavoprotein BSR55_02670 PF07361 Cytochrome b562 BSR55_02675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BSR55_02675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BSR55_02680 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA BSR55_02700 PF02556 Preprotein translocase subunit SecB BSR55_02705 PF00462 Glutaredoxin BSR55_02715 PF03193 RsgA GTPase BSR55_02720 PF00929 Exonuclease BSR55_02735 PF04717 Type VI secretion system, phage-baseplate injector BSR55_02790 PF02321 Outer membrane efflux protein BSR55_02795 PF02687 FtsX-like permease family BSR55_02795 PF12704 MacB-like periplasmic core domain BSR55_02795 PF00005 ABC transporter BSR55_02800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSR55_02815 PF08264 Anticodon-binding domain of tRNA BSR55_02815 PF00133 tRNA synthetases class I (I, L, M and V) BSR55_02815 PF13603 Leucyl-tRNA synthetase, Domain 2 BSR55_02815 PF09334 tRNA synthetases class I (M) BSR55_02825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSR55_02825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSR55_02825 PF00205 Thiamine pyrophosphate enzyme, central domain BSR55_02830 PF10369 Small subunit of acetolactate synthase BSR55_02835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BSR55_02835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BSR55_02850 PF00534 Glycosyl transferases group 1 BSR55_02850 PF13439 Glycosyltransferase Family 4 BSR55_02855 PF01569 PAP2 superfamily BSR55_02860 PF04384 Iron-sulphur cluster assembly BSR55_02865 PF00334 Nucleoside diphosphate kinase BSR55_02870 PF04055 Radical SAM superfamily BSR55_02875 PF18073 Rubredoxin metal binding domain BSR55_02880 PF13464 Domain of unknown function (DUF4115) BSR55_02885 PF04551 GcpE protein BSR55_02890 PF03129 Anticodon binding domain BSR55_02890 PF13393 Histidyl-tRNA synthetase BSR55_02900 PF13360 PQQ-like domain BSR55_02905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BSR55_02905 PF01926 50S ribosome-binding GTPase BSR55_02915 PF00909 Ammonium Transporter Family BSR55_02925 PF01261 Xylose isomerase-like TIM barrel BSR55_02930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSR55_02930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSR55_02935 PF00378 Enoyl-CoA hydratase/isomerase BSR55_02940 PF00672 HAMP domain BSR55_02940 PF00512 His Kinase A (phospho-acceptor) domain BSR55_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_02940 PF01627 Hpt domain BSR55_02940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BSR55_02940 PF00072 Response regulator receiver domain BSR55_02945 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_02955 PF05958 tRNA (Uracil-5-)-methyltransferase BSR55_02960 PF04607 Region found in RelA / SpoT proteins BSR55_02960 PF13291 ACT domain BSR55_02960 PF02824 TGS domain BSR55_02975 PF03819 MazG nucleotide pyrophosphohydrolase domain BSR55_02990 PF01743 Poly A polymerase head domain BSR55_02990 PF12626 Polymerase A arginine-rich C-terminus BSR55_02990 PF12627 Probable RNA and SrmB- binding site of polymerase A BSR55_02995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BSR55_03000 PF02548 Ketopantoate hydroxymethyltransferase BSR55_03005 PF02569 Pantoate-beta-alanine ligase BSR55_03010 PF03668 P-loop ATPase protein family BSR55_03015 PF00381 PTS HPr component phosphorylation site BSR55_03020 PF04751 Protein of unknown function (DUF615) BSR55_03030 PF00672 HAMP domain BSR55_03030 PF00512 His Kinase A (phospho-acceptor) domain BSR55_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_03035 PF00072 Response regulator receiver domain BSR55_03035 PF00486 Transcriptional regulatory protein, C terminal BSR55_03045 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BSR55_03070 PF01923 Cobalamin adenosyltransferase BSR55_03075 PF07715 TonB-dependent Receptor Plug Domain BSR55_03075 PF00593 TonB dependent receptor BSR55_03080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BSR55_03085 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_03105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BSR55_03105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BSR55_03115 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BSR55_03120 PF00893 Small Multidrug Resistance protein BSR55_03145 PF00437 Type II/IV secretion system protein BSR55_03155 PF02566 OsmC-like protein BSR55_03160 PF01047 MarR family BSR55_03165 PF00795 Carbon-nitrogen hydrolase BSR55_03180 PF04333 MlaA lipoprotein BSR55_03220 PF01588 Putative tRNA binding domain BSR55_03220 PF09334 tRNA synthetases class I (M) BSR55_03255 PF10609 NUBPL iron-transfer P-loop NTPase BSR55_03265 PF01048 Phosphorylase superfamily BSR55_03280 PF00692 dUTPase BSR55_03325 PF04073 Aminoacyl-tRNA editing domain BSR55_03325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSR55_03325 PF03129 Anticodon binding domain BSR55_03335 PF00072 Response regulator receiver domain BSR55_03340 PF00072 Response regulator receiver domain BSR55_03345 PF01584 CheW-like domain BSR55_03350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSR55_03350 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BSR55_03355 PF01627 Hpt domain BSR55_03355 PF01584 CheW-like domain BSR55_03355 PF00072 Response regulator receiver domain BSR55_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_03365 PF00563 EAL domain BSR55_03365 PF00990 Diguanylate cyclase, GGDEF domain BSR55_03365 PF03707 Bacterial signalling protein N terminal repeat BSR55_03370 PF00419 Fimbrial protein BSR55_03380 PF02753 Pili assembly chaperone PapD, C-terminal domain BSR55_03380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BSR55_03385 PF00577 Outer membrane usher protein BSR55_03385 PF13954 PapC N-terminal domain BSR55_03385 PF13953 PapC C-terminal domain BSR55_03390 PF00419 Fimbrial protein BSR55_03395 PF00419 Fimbrial protein BSR55_03405 PF00009 Elongation factor Tu GTP binding domain BSR55_03405 PF03144 Elongation factor Tu domain 2 BSR55_03405 PF16658 Class II release factor RF3, C-terminal domain BSR55_03420 PF01026 TatD related DNase BSR55_03425 PF00330 Aconitase family (aconitate hydratase) BSR55_03425 PF00694 Aconitase C-terminal domain BSR55_03430 PF00899 ThiF family BSR55_03445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_03445 PF03466 LysR substrate binding domain BSR55_03450 PF01207 Dihydrouridine synthase (Dus) BSR55_03470 PF00221 Aromatic amino acid lyase BSR55_03475 PF00392 Bacterial regulatory proteins, gntR family BSR55_03475 PF07729 FCD domain BSR55_03485 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSR55_03490 PF13378 Enolase C-terminal domain-like BSR55_03490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSR55_03510 PF07690 Major Facilitator Superfamily BSR55_03515 PF04966 Carbohydrate-selective porin, OprB family BSR55_03520 PF00392 Bacterial regulatory proteins, gntR family BSR55_03520 PF07702 UTRA domain BSR55_03530 PF04966 Carbohydrate-selective porin, OprB family BSR55_03535 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSR55_03535 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSR55_03560 PF01522 Polysaccharide deacetylase BSR55_03565 PF01425 Amidase BSR55_03570 PF00356 Bacterial regulatory proteins, lacI family BSR55_03575 PF00795 Carbon-nitrogen hydrolase BSR55_03585 PF01425 Amidase BSR55_03610 PF07690 Major Facilitator Superfamily BSR55_03620 PF09278 MerR, DNA binding BSR55_03620 PF00376 MerR family regulatory protein BSR55_03625 PF02016 LD-carboxypeptidase N-terminal domain BSR55_03625 PF17676 LD-carboxypeptidase C-terminal domain BSR55_03640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BSR55_03640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BSR55_03645 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BSR55_03650 PF02233 NAD(P) transhydrogenase beta subunit BSR55_03660 PF07549 SecD/SecF GG Motif BSR55_03660 PF02355 Protein export membrane protein BSR55_03665 PF02355 Protein export membrane protein BSR55_03665 PF13721 SecD export protein N-terminal TM region BSR55_03665 PF07549 SecD/SecF GG Motif BSR55_03670 PF02699 Preprotein translocase subunit BSR55_03675 PF01702 Queuine tRNA-ribosyltransferase BSR55_03700 PF02547 Queuosine biosynthesis protein BSR55_03710 PF13784 Fic/DOC family N-terminal BSR55_03710 PF02661 Fic/DOC family BSR55_03720 PF00324 Amino acid permease BSR55_03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_03730 PF03466 LysR substrate binding domain BSR55_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_03750 PF03466 LysR substrate binding domain BSR55_03755 PF01565 FAD binding domain BSR55_03755 PF02913 FAD linked oxidases, C-terminal domain BSR55_03755 PF13183 4Fe-4S dicluster domain BSR55_03760 PF01266 FAD dependent oxidoreductase BSR55_03765 PF00171 Aldehyde dehydrogenase family BSR55_03770 PF07063 Domain of unknown function (DUF1338) BSR55_03775 PF00202 Aminotransferase class-III BSR55_03780 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BSR55_03780 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSR55_03785 PF00512 His Kinase A (phospho-acceptor) domain BSR55_03785 PF00672 HAMP domain BSR55_03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_03785 PF13426 PAS domain BSR55_03790 PF03710 Glutamate-ammonia ligase adenylyltransferase BSR55_03790 PF08335 GlnD PII-uridylyltransferase BSR55_03795 PF01063 Amino-transferase class IV BSR55_03800 PF01370 NAD dependent epimerase/dehydratase family BSR55_03805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BSR55_03805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BSR55_03805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BSR55_03815 PF11380 Stealth protein CR2, conserved region 2 BSR55_03815 PF17103 Stealth protein CR4, conserved region 4 BSR55_03815 PF17101 Stealth protein CR1, conserved region 1 BSR55_03815 PF17102 Stealth protein CR3, conserved region 3 BSR55_03830 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BSR55_03835 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BSR55_03840 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BSR55_03865 PF00152 tRNA synthetases class II (D, K and N) BSR55_03865 PF02938 GAD domain BSR55_03865 PF01336 OB-fold nucleic acid binding domain BSR55_03880 PF00593 TonB dependent receptor BSR55_03880 PF07715 TonB-dependent Receptor Plug Domain BSR55_03905 PF06146 Phosphate-starvation-inducible E BSR55_03915 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_03915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_03915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_03915 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSR55_03920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_03920 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSR55_03920 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_03920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_03930 PF00501 AMP-binding enzyme BSR55_03930 PF13193 AMP-binding enzyme C-terminal domain BSR55_03935 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BSR55_03935 PF12833 Helix-turn-helix domain BSR55_03960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSR55_03960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSR55_03960 PF02824 TGS domain BSR55_03960 PF03129 Anticodon binding domain BSR55_03965 PF05198 Translation initiation factor IF-3, N-terminal domain BSR55_03965 PF00707 Translation initiation factor IF-3, C-terminal domain BSR55_03975 PF02798 Glutathione S-transferase, N-terminal domain BSR55_03975 PF00043 Glutathione S-transferase, C-terminal domain BSR55_03990 PF09335 SNARE associated Golgi protein BSR55_04010 PF01632 Ribosomal protein L35 BSR55_04015 PF00453 Ribosomal protein L20 BSR55_04050 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BSR55_04050 PF01409 tRNA synthetases class II core domain (F) BSR55_04055 PF01588 Putative tRNA binding domain BSR55_04055 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BSR55_04055 PF03483 B3/4 domain BSR55_04055 PF03484 tRNA synthetase B5 domain BSR55_04055 PF03147 Ferredoxin-fold anticodon binding domain BSR55_04060 PF00216 Bacterial DNA-binding protein BSR55_04075 PF07497 Rho termination factor, RNA-binding domain BSR55_04075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSR55_04075 PF07498 Rho termination factor, N-terminal domain BSR55_04080 PF00085 Thioredoxin BSR55_04085 PF02541 Ppx/GppA phosphatase family BSR55_04090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BSR55_04095 PF09179 TilS substrate binding domain BSR55_04095 PF01171 PP-loop family BSR55_04095 PF11734 TilS substrate C-terminal domain BSR55_04100 PF03807 NADP oxidoreductase coenzyme F420-dependent BSR55_04100 PF14748 Pyrroline-5-carboxylate reductase dimerisation BSR55_04105 PF02325 YGGT family BSR55_04115 PF00196 Bacterial regulatory proteins, luxR family BSR55_04125 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BSR55_04125 PF06594 Haemolysin-type calcium binding protein related domain BSR55_04130 PF00268 Ribonucleotide reductase, small chain BSR55_04140 PF02867 Ribonucleotide reductase, barrel domain BSR55_04140 PF00317 Ribonucleotide reductase, all-alpha domain BSR55_04140 PF03477 ATP cone domain BSR55_04145 PF00486 Transcriptional regulatory protein, C terminal BSR55_04145 PF00072 Response regulator receiver domain BSR55_04150 PF00512 His Kinase A (phospho-acceptor) domain BSR55_04150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_04150 PF00672 HAMP domain BSR55_04160 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BSR55_04165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BSR55_04170 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BSR55_04170 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BSR55_04180 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BSR55_04180 PF10531 SLBB domain BSR55_04180 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BSR55_04185 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSR55_04185 PF00384 Molybdopterin oxidoreductase BSR55_04185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSR55_04190 PF00146 NADH dehydrogenase BSR55_04195 PF12838 4Fe-4S dicluster domain BSR55_04200 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BSR55_04205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSR55_04210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSR55_04210 PF00361 Proton-conducting membrane transporter BSR55_04215 PF00361 Proton-conducting membrane transporter BSR55_04220 PF00361 Proton-conducting membrane transporter BSR55_04240 PF03466 LysR substrate binding domain BSR55_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_04245 PF00175 Oxidoreductase NAD-binding domain BSR55_04245 PF00970 Oxidoreductase FAD-binding domain BSR55_04250 PF01266 FAD dependent oxidoreductase BSR55_04255 PF00490 Delta-aminolevulinic acid dehydratase BSR55_04260 PF03061 Thioesterase superfamily BSR55_04265 PF00529 HlyD membrane-fusion protein of T1SS BSR55_04265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSR55_04270 PF07690 Major Facilitator Superfamily BSR55_04290 PF00809 Pterin binding enzyme BSR55_04290 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSR55_04290 PF02607 B12 binding domain BSR55_04290 PF02310 B12 binding domain BSR55_04290 PF02574 Homocysteine S-methyltransferase BSR55_04295 PF13018 Extended Signal Peptide of Type V secretion system BSR55_04295 PF03895 YadA-like membrane anchor domain BSR55_04295 PF05662 Coiled stalk of trimeric autotransporter adhesin BSR55_04295 PF05658 Head domain of trimeric autotransporter adhesin BSR55_04300 PF01384 Phosphate transporter family BSR55_04305 PF14052 Capsule assembly protein Wzi BSR55_04315 PF01507 Phosphoadenosine phosphosulfate reductase family BSR55_04320 PF00009 Elongation factor Tu GTP binding domain BSR55_04340 PF00107 Zinc-binding dehydrogenase BSR55_04340 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_04345 PF00107 Zinc-binding dehydrogenase BSR55_04345 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_04355 PF02416 mttA/Hcf106 family BSR55_04360 PF02416 mttA/Hcf106 family BSR55_04375 PF03600 Citrate transporter BSR55_04380 PF03471 Transporter associated domain BSR55_04380 PF00571 CBS domain BSR55_04380 PF01595 Cyclin M transmembrane N-terminal domain BSR55_04385 PF03466 LysR substrate binding domain BSR55_04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_04390 PF00463 Isocitrate lyase family BSR55_04400 PF03776 Septum formation topological specificity factor MinE BSR55_04405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSR55_04410 PF03775 Septum formation inhibitor MinC, C-terminal domain BSR55_04420 PF01553 Acyltransferase BSR55_04425 PF13488 Glycine zipper BSR55_04425 PF00691 OmpA family BSR55_04430 PF00580 UvrD/REP helicase N-terminal domain BSR55_04430 PF13361 UvrD-like helicase C-terminal domain BSR55_04435 PF00692 dUTPase BSR55_04440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSR55_04440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSR55_04440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSR55_04440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSR55_04445 PF00696 Amino acid kinase family BSR55_04455 PF13230 Glutamine amidotransferases class-II BSR55_04460 PF01814 Hemerythrin HHE cation binding domain BSR55_04470 PF03658 RnfH family Ubiquitin BSR55_04475 PF04355 SmpA / OmlA family BSR55_04480 PF01475 Ferric uptake regulator family BSR55_04485 PF00437 Type II/IV secretion system protein BSR55_04490 PF00437 Type II/IV secretion system protein BSR55_04495 PF01168 Alanine racemase, N-terminal domain BSR55_04500 PF02673 Bacitracin resistance protein BacA BSR55_04525 PF12320 Type 5 capsule protein repressor C-terminal domain BSR55_04525 PF00149 Calcineurin-like phosphoesterase BSR55_04550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BSR55_04555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BSR55_04555 PF14572 Phosphoribosyl synthetase-associated domain BSR55_04565 PF03616 Sodium/glutamate symporter BSR55_04570 PF02417 Chromate transporter BSR55_04575 PF01734 Patatin-like phospholipase BSR55_04580 PF03061 Thioesterase superfamily BSR55_04605 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSR55_04605 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSR55_04610 PF07152 YaeQ protein BSR55_04615 PF02308 MgtC family BSR55_04625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSR55_04655 PF01522 Polysaccharide deacetylase BSR55_04655 PF14883 Hypothetical glycosyl hydrolase family 13 BSR55_04660 PF00535 Glycosyl transferase family 2 BSR55_04695 PF00440 Bacterial regulatory proteins, tetR family BSR55_04705 PF00378 Enoyl-CoA hydratase/isomerase BSR55_04715 PF01521 Iron-sulphur cluster biosynthesis BSR55_04715 PF01106 NifU-like domain BSR55_04720 PF07715 TonB-dependent Receptor Plug Domain BSR55_04720 PF00593 TonB dependent receptor BSR55_04730 PF00561 alpha/beta hydrolase fold BSR55_04735 PF00484 Carbonic anhydrase BSR55_04760 PF00324 Amino acid permease BSR55_04765 PF04303 PrpF protein BSR55_04775 PF00348 Polyprenyl synthetase BSR55_04780 PF00474 Sodium:solute symporter family BSR55_04785 PF01145 SPFH domain / Band 7 family BSR55_04795 PF01734 Patatin-like phospholipase BSR55_04810 PF00884 Sulfatase BSR55_04810 PF08019 Phosphoethanolamine transferase EptA/EptB BSR55_04815 PF00072 Response regulator receiver domain BSR55_04815 PF00486 Transcriptional regulatory protein, C terminal BSR55_04820 PF08521 Two-component sensor kinase N-terminal BSR55_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_04820 PF00512 His Kinase A (phospho-acceptor) domain BSR55_04835 PF00909 Ammonium Transporter Family BSR55_04860 PF04480 Protein of unknown function (DUF559) BSR55_04865 PF10458 Valyl tRNA synthetase tRNA binding arm BSR55_04865 PF08264 Anticodon-binding domain of tRNA BSR55_04865 PF00133 tRNA synthetases class I (I, L, M and V) BSR55_04890 PF01906 Putative heavy-metal-binding BSR55_04895 PF01906 Putative heavy-metal-binding BSR55_04900 PF02321 Outer membrane efflux protein BSR55_04905 PF00873 AcrB/AcrD/AcrF family BSR55_04910 PF00529 HlyD membrane-fusion protein of T1SS BSR55_04910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSR55_04915 PF01569 PAP2 superfamily BSR55_04925 PF00348 Polyprenyl synthetase BSR55_04930 PF00829 Ribosomal prokaryotic L21 protein BSR55_04935 PF01016 Ribosomal L27 protein BSR55_04940 PF03548 Outer membrane lipoprotein carrier protein LolA BSR55_04950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSR55_04950 PF02403 Seryl-tRNA synthetase N-terminal domain BSR55_04955 PF14824 Sirohaem biosynthesis protein central BSR55_04955 PF10414 Sirohaem synthase dimerisation region BSR55_04955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSR55_04960 PF00588 SpoU rRNA Methylase family BSR55_04985 PF03358 NADPH-dependent FMN reductase BSR55_04990 PF13520 Amino acid permease BSR55_05000 PF00465 Iron-containing alcohol dehydrogenase BSR55_05010 PF03099 Biotin/lipoate A/B protein ligase family BSR55_05015 PF04359 Protein of unknown function (DUF493) BSR55_05020 PF04542 Sigma-70 region 2 BSR55_05020 PF04539 Sigma-70 region 3 BSR55_05020 PF04545 Sigma-70, region 4 BSR55_05020 PF00140 Sigma-70 factor, region 1.2 BSR55_05020 PF03979 Sigma-70 factor, region 1.1 BSR55_05020 PF04546 Sigma-70, non-essential region BSR55_05045 PF09335 SNARE associated Golgi protein BSR55_05060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BSR55_05075 PF02261 Aspartate decarboxylase BSR55_05080 PF01195 Peptidyl-tRNA hydrolase BSR55_05085 PF01386 Ribosomal L25p family BSR55_05090 PF14572 Phosphoribosyl synthetase-associated domain BSR55_05090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BSR55_05115 PF00288 GHMP kinases N terminal domain BSR55_05115 PF08544 GHMP kinases C terminal BSR55_05120 PF03550 Outer membrane lipoprotein LolB BSR55_05130 PF01488 Shikimate / quinate 5-dehydrogenase BSR55_05130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BSR55_05130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BSR55_05140 PF10410 DnaB-helicase binding domain of primase BSR55_05140 PF08278 DNA primase DnaG DnaB-binding BSR55_05140 PF08275 DNA primase catalytic core, N-terminal domain BSR55_05140 PF01807 CHC2 zinc finger BSR55_05145 PF13525 Outer membrane lipoprotein BSR55_05150 PF00849 RNA pseudouridylate synthase BSR55_05150 PF01479 S4 domain BSR55_05160 PF03358 NADPH-dependent FMN reductase BSR55_05175 PF01668 SmpB protein BSR55_05180 PF01467 Cytidylyltransferase-like BSR55_05185 PF00037 4Fe-4S binding domain BSR55_05210 PF16655 PhoD-like phosphatase, N-terminal domain BSR55_05210 PF09423 PhoD-like phosphatase BSR55_05230 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BSR55_05230 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BSR55_05245 PF00083 Sugar (and other) transporter BSR55_05250 PF00455 DeoR C terminal sensor domain BSR55_05250 PF08220 DeoR-like helix-turn-helix domain BSR55_05255 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BSR55_05255 PF01266 FAD dependent oxidoreductase BSR55_05270 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BSR55_05270 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BSR55_05275 PF00781 Diacylglycerol kinase catalytic domain BSR55_05280 PF00149 Calcineurin-like phosphoesterase BSR55_05285 PF00166 Chaperonin 10 Kd subunit BSR55_05290 PF00118 TCP-1/cpn60 chaperonin family BSR55_05295 PF01219 Prokaryotic diacylglycerol kinase BSR55_05300 PF03009 Glycerophosphoryl diester phosphodiesterase family BSR55_05305 PF00873 AcrB/AcrD/AcrF family BSR55_05310 PF01769 Divalent cation transporter BSR55_05310 PF00571 CBS domain BSR55_05310 PF03448 MgtE intracellular N domain BSR55_05340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BSR55_05340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BSR55_05345 PF01784 NIF3 (NGG1p interacting factor 3) BSR55_05350 PF13180 PDZ domain BSR55_05350 PF17820 PDZ domain BSR55_05365 PF18073 Rubredoxin metal binding domain BSR55_05370 PF00324 Amino acid permease BSR55_05380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BSR55_05380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BSR55_05385 PF01678 Diaminopimelate epimerase BSR55_05400 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_05400 PF05362 Lon protease (S16) C-terminal proteolytic domain BSR55_05400 PF02190 ATP-dependent protease La (LON) substrate-binding domain BSR55_05405 PF01812 5-formyltetrahydrofolate cyclo-ligase family BSR55_05415 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BSR55_05435 PF00324 Amino acid permease BSR55_05445 PF00324 Amino acid permease BSR55_05455 PF00929 Exonuclease BSR55_05460 PF01979 Amidohydrolase family BSR55_05480 PF01435 Peptidase family M48 BSR55_05485 PF01464 Transglycosylase SLT domain BSR55_05490 PF01171 PP-loop family BSR55_05500 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSR55_05500 PF01464 Transglycosylase SLT domain BSR55_05505 PF01272 Transcription elongation factor, GreA/GreB, C-term BSR55_05505 PF03449 Transcription elongation factor, N-terminal BSR55_05515 PF00924 Mechanosensitive ion channel BSR55_05520 PF00043 Glutathione S-transferase, C-terminal domain BSR55_05520 PF02798 Glutathione S-transferase, N-terminal domain BSR55_05525 PF01144 Coenzyme A transferase BSR55_05530 PF01144 Coenzyme A transferase BSR55_05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_05535 PF03466 LysR substrate binding domain BSR55_05550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSR55_05550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSR55_05565 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_05575 PF03466 LysR substrate binding domain BSR55_05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_05580 PF07715 TonB-dependent Receptor Plug Domain BSR55_05580 PF00593 TonB dependent receptor BSR55_05590 PF04542 Sigma-70 region 2 BSR55_05590 PF08281 Sigma-70, region 4 BSR55_05595 PF04773 FecR protein BSR55_05595 PF16220 Domain of unknown function (DUF4880) BSR55_05600 PF01126 Heme oxygenase BSR55_05615 PF03781 Sulfatase-modifying factor enzyme 1 BSR55_05620 PF00884 Sulfatase BSR55_05625 PF04717 Type VI secretion system, phage-baseplate injector BSR55_05630 PF03527 RHS protein BSR55_05630 PF05593 RHS Repeat BSR55_05685 PF01614 Bacterial transcriptional regulator BSR55_05685 PF09339 IclR helix-turn-helix domain BSR55_05690 PF01144 Coenzyme A transferase BSR55_05695 PF01144 Coenzyme A transferase BSR55_05700 PF00108 Thiolase, N-terminal domain BSR55_05700 PF02803 Thiolase, C-terminal domain BSR55_05705 PF00206 Lyase BSR55_05705 PF10397 Adenylosuccinate lyase C-terminus BSR55_05710 PF00561 alpha/beta hydrolase fold BSR55_05715 PF07690 Major Facilitator Superfamily BSR55_05720 PF02627 Carboxymuconolactone decarboxylase family BSR55_05725 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BSR55_05725 PF00775 Dioxygenase BSR55_05730 PF00775 Dioxygenase BSR55_05735 PF01487 Type I 3-dehydroquinase BSR55_05740 PF05048 Periplasmic copper-binding protein (NosD) BSR55_05745 PF04966 Carbohydrate-selective porin, OprB family BSR55_05750 PF01011 PQQ enzyme repeat BSR55_05750 PF13360 PQQ-like domain BSR55_05760 PF02753 Pili assembly chaperone PapD, C-terminal domain BSR55_05760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BSR55_05765 PF13953 PapC C-terminal domain BSR55_05765 PF00577 Outer membrane usher protein BSR55_05765 PF13954 PapC N-terminal domain BSR55_05775 PF03466 LysR substrate binding domain BSR55_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_05785 PF03466 LysR substrate binding domain BSR55_05795 PF00376 MerR family regulatory protein BSR55_05795 PF09278 MerR, DNA binding BSR55_05800 PF00403 Heavy-metal-associated domain BSR55_05820 PF00512 His Kinase A (phospho-acceptor) domain BSR55_05820 PF00672 HAMP domain BSR55_05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_05825 PF00486 Transcriptional regulatory protein, C terminal BSR55_05825 PF00072 Response regulator receiver domain BSR55_05835 PF17209 Hfq protein BSR55_05840 PF02673 Bacitracin resistance protein BacA BSR55_05845 PF03814 Potassium-transporting ATPase A subunit BSR55_05855 PF02669 K+-transporting ATPase, c chain BSR55_05860 PF13492 GAF domain BSR55_05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_05860 PF00512 His Kinase A (phospho-acceptor) domain BSR55_05860 PF02702 Osmosensitive K+ channel His kinase sensor domain BSR55_05860 PF13493 Domain of unknown function (DUF4118) BSR55_05865 PF00072 Response regulator receiver domain BSR55_05865 PF00486 Transcriptional regulatory protein, C terminal BSR55_05875 PF01126 Heme oxygenase BSR55_05880 PF04304 Protein of unknown function (DUF454) BSR55_05890 PF04542 Sigma-70 region 2 BSR55_05890 PF08281 Sigma-70, region 4 BSR55_05935 PF00593 TonB dependent receptor BSR55_05935 PF07715 TonB-dependent Receptor Plug Domain BSR55_06000 PF00717 Peptidase S24-like BSR55_06030 PF00145 C-5 cytosine-specific DNA methylase BSR55_06070 PF00145 C-5 cytosine-specific DNA methylase BSR55_06135 PF07030 Protein of unknown function (DUF1320) BSR55_06290 PF11799 impB/mucB/samB family C-terminal domain BSR55_06290 PF00817 impB/mucB/samB family BSR55_06290 PF13438 Domain of unknown function (DUF4113) BSR55_06290 PF11798 IMS family HHH motif BSR55_06330 PF05195 Aminopeptidase P, N-terminal domain BSR55_06330 PF00557 Metallopeptidase family M24 BSR55_06340 PF07715 TonB-dependent Receptor Plug Domain BSR55_06340 PF00593 TonB dependent receptor BSR55_06345 PF01494 FAD binding domain BSR55_06350 PF01494 FAD binding domain BSR55_06365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSR55_06375 PF02021 Uncharacterised protein family UPF0102 BSR55_06380 PF04972 BON domain BSR55_06390 PF00293 NUDIX domain BSR55_06390 PF09297 NADH pyrophosphatase zinc ribbon domain BSR55_06400 PF00929 Exonuclease BSR55_06405 PF01464 Transglycosylase SLT domain BSR55_06405 PF01476 LysM domain BSR55_06410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSR55_06415 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_06420 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_06420 PF12911 N-terminal TM domain of oligopeptide transport permease C BSR55_06425 PF00005 ABC transporter BSR55_06425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSR55_06430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSR55_06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_06445 PF00557 Metallopeptidase family M24 BSR55_06450 PF00318 Ribosomal protein S2 BSR55_06455 PF00889 Elongation factor TS BSR55_06485 PF16142 Domain of unknown function (DUF4850) BSR55_06500 PF05036 Sporulation related domain BSR55_06500 PF03330 Lytic transglycolase BSR55_06505 PF13406 Transglycosylase SLT domain BSR55_06510 PF01098 Cell cycle protein BSR55_06530 PF14489 QueF-like protein BSR55_06530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BSR55_06535 PF01061 ABC-2 type transporter BSR55_06540 PF00005 ABC transporter BSR55_06550 PF13356 Arm DNA-binding domain BSR55_06550 PF00589 Phage integrase family BSR55_06705 PF07484 Phage Tail Collar Domain BSR55_06710 PF02413 Caudovirales tail fibre assembly protein, lambda gpK BSR55_06715 PF04984 Phage tail sheath protein subtilisin-like domain BSR55_06715 PF17482 Phage tail sheath C-terminal domain BSR55_06820 PF01381 Helix-turn-helix BSR55_06875 PF00464 Serine hydroxymethyltransferase BSR55_06880 PF01272 Transcription elongation factor, GreA/GreB, C-term BSR55_06880 PF14760 Rnk N-terminus BSR55_06890 PF04345 Chorismate lyase BSR55_06895 PF01040 UbiA prenyltransferase family BSR55_06905 PF00860 Permease family BSR55_06915 PF01613 Flavin reductase like domain BSR55_06935 PF02567 Phenazine biosynthesis-like protein BSR55_06940 PF00675 Insulinase (Peptidase family M16) BSR55_06940 PF05193 Peptidase M16 inactive domain BSR55_06950 PF00175 Oxidoreductase NAD-binding domain BSR55_06950 PF00970 Oxidoreductase FAD-binding domain BSR55_06955 PF01980 tRNA-methyltransferase O BSR55_06955 PF18389 TrmO C-terminal domain BSR55_06960 PF01928 CYTH domain BSR55_06975 PF02581 Thiamine monophosphate synthase BSR55_06980 PF00202 Aminotransferase class-III BSR55_07020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BSR55_07020 PF00437 Type II/IV secretion system protein BSR55_07025 PF04076 Bacterial OB fold (BOF) protein BSR55_07030 PF00072 Response regulator receiver domain BSR55_07030 PF00486 Transcriptional regulatory protein, C terminal BSR55_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_07035 PF00512 His Kinase A (phospho-acceptor) domain BSR55_07035 PF08521 Two-component sensor kinase N-terminal BSR55_07045 PF00293 NUDIX domain BSR55_07055 PF00905 Penicillin binding protein transpeptidase domain BSR55_07055 PF00912 Transglycosylase BSR55_07055 PF14814 Bifunctional transglycosylase second domain BSR55_07060 PF01513 ATP-NAD kinase BSR55_07065 PF07023 Protein of unknown function (DUF1315) BSR55_07075 PF00591 Glycosyl transferase family, a/b domain BSR55_07075 PF02885 Glycosyl transferase family, helical bundle domain BSR55_07080 PF00375 Sodium:dicarboxylate symporter family BSR55_07085 PF00472 RF-1 domain BSR55_07090 PF01018 GTP1/OBG BSR55_07090 PF01926 50S ribosome-binding GTPase BSR55_07095 PF00696 Amino acid kinase family BSR55_07095 PF01472 PUA domain BSR55_07100 PF03819 MazG nucleotide pyrophosphohydrolase domain BSR55_07120 PF07759 Protein of unknown function (DUF1615) BSR55_07125 PF01207 Dihydrouridine synthase (Dus) BSR55_07130 PF03466 LysR substrate binding domain BSR55_07130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_07135 PF00206 Lyase BSR55_07135 PF10415 Fumarase C C-terminus BSR55_07140 PF04966 Carbohydrate-selective porin, OprB family BSR55_07145 PF12146 Serine aminopeptidase, S33 BSR55_07150 PF05025 RbsD / FucU transport protein family BSR55_07155 PF00083 Sugar (and other) transporter BSR55_07155 PF08946 Osmosensory transporter coiled coil BSR55_07165 PF05544 Proline racemase BSR55_07170 PF00732 GMC oxidoreductase BSR55_07170 PF05199 GMC oxidoreductase BSR55_07180 PF12697 Alpha/beta hydrolase family BSR55_07185 PF01958 Domain of unknown function DUF108 BSR55_07185 PF03447 Homoserine dehydrogenase, NAD binding domain BSR55_07195 PF02264 LamB porin BSR55_07210 PF07690 Major Facilitator Superfamily BSR55_07215 PF00892 EamA-like transporter family BSR55_07225 PF00356 Bacterial regulatory proteins, lacI family BSR55_07235 PF05163 DinB family BSR55_07240 PF03060 Nitronate monooxygenase BSR55_07270 PF05175 Methyltransferase small domain BSR55_07290 PF00578 AhpC/TSA family BSR55_07290 PF10417 C-terminal domain of 1-Cys peroxiredoxin BSR55_07295 PF00271 Helicase conserved C-terminal domain BSR55_07295 PF11898 Domain of unknown function (DUF3418) BSR55_07295 PF04408 Helicase associated domain (HA2) BSR55_07295 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BSR55_07295 PF00270 DEAD/DEAH box helicase BSR55_07300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BSR55_07300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BSR55_07325 PF13086 AAA domain BSR55_07325 PF13195 Protein of unknown function (DUF4011) BSR55_07325 PF13195 Protein of unknown function (DUF4011) BSR55_07325 PF13087 AAA domain BSR55_07325 PF13086 AAA domain BSR55_07325 PF13087 AAA domain BSR55_07330 PF05860 haemagglutination activity domain BSR55_07335 PF17287 POTRA domain BSR55_07335 PF08479 POTRA domain, ShlB-type BSR55_07335 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BSR55_07340 PF07702 UTRA domain BSR55_07340 PF00392 Bacterial regulatory proteins, gntR family BSR55_07345 PF05962 HutD BSR55_07350 PF01175 Urocanase Rossmann-like domain BSR55_07350 PF17391 Urocanase N-terminal domain BSR55_07350 PF17392 Urocanase C-terminal domain BSR55_07355 PF00221 Aromatic amino acid lyase BSR55_07360 PF00324 Amino acid permease BSR55_07365 PF01979 Amidohydrolase family BSR55_07370 PF00491 Arginase family BSR55_07375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSR55_07375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BSR55_07395 PF00440 Bacterial regulatory proteins, tetR family BSR55_07400 PF00743 Flavin-binding monooxygenase-like BSR55_07405 PF00106 short chain dehydrogenase BSR55_07410 PF01810 LysE type translocator BSR55_07420 PF12704 MacB-like periplasmic core domain BSR55_07420 PF02687 FtsX-like permease family BSR55_07425 PF00005 ABC transporter BSR55_07440 PF06965 Na+/H+ antiporter 1 BSR55_07440 PF01343 Peptidase family S49 BSR55_07450 PF00551 Formyl transferase BSR55_07455 PF02769 AIR synthase related protein, C-terminal domain BSR55_07455 PF00586 AIR synthase related protein, N-terminal domain BSR55_07460 PF01594 AI-2E family transporter BSR55_07465 PF11638 DnaA N-terminal domain BSR55_07465 PF08299 Bacterial dnaA protein helix-turn-helix BSR55_07465 PF00308 Bacterial dnaA protein BSR55_07485 PF05816 Toxic anion resistance protein (TelA) BSR55_07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_07500 PF13192 Thioredoxin domain BSR55_07505 PF02525 Flavodoxin-like fold BSR55_07510 PF03466 LysR substrate binding domain BSR55_07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_07515 PF12838 4Fe-4S dicluster domain BSR55_07525 PF03960 ArsC family BSR55_07530 PF01022 Bacterial regulatory protein, arsR family BSR55_07535 PF01758 Sodium Bile acid symporter family BSR55_07540 PF13411 MerR HTH family regulatory protein BSR55_07560 PF00376 MerR family regulatory protein BSR55_07560 PF09278 MerR, DNA binding BSR55_07575 PF00849 RNA pseudouridylate synthase BSR55_07580 PF12137 RNA polymerase recycling family C-terminal BSR55_07580 PF00176 SNF2 family N-terminal domain BSR55_07580 PF18339 RapA N-terminal Tudor like domain 1 BSR55_07580 PF18337 RapA N-terminal Tudor like domain BSR55_07580 PF00271 Helicase conserved C-terminal domain BSR55_07585 PF00501 AMP-binding enzyme BSR55_07595 PF05173 Dihydrodipicolinate reductase, C-terminus BSR55_07595 PF01113 Dihydrodipicolinate reductase, N-terminus BSR55_07600 PF00440 Bacterial regulatory proteins, tetR family BSR55_07605 PF00970 Oxidoreductase FAD-binding domain BSR55_07605 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_07605 PF00175 Oxidoreductase NAD-binding domain BSR55_07610 PF00487 Fatty acid desaturase BSR55_07625 PF01925 Sulfite exporter TauE/SafE BSR55_07630 PF07715 TonB-dependent Receptor Plug Domain BSR55_07630 PF07660 Secretin and TonB N terminus short domain BSR55_07630 PF00593 TonB dependent receptor BSR55_07635 PF13276 HTH-like domain BSR55_07635 PF00665 Integrase core domain BSR55_07635 PF13333 Integrase core domain BSR55_07650 PF00202 Aminotransferase class-III BSR55_07655 PF00282 Pyridoxal-dependent decarboxylase conserved domain BSR55_07665 PF00037 4Fe-4S binding domain BSR55_07665 PF11953 Domain of unknown function (DUF3470) BSR55_07675 PF05190 MutS family domain IV BSR55_07675 PF05188 MutS domain II BSR55_07675 PF05192 MutS domain III BSR55_07675 PF00488 MutS domain V BSR55_07675 PF01624 MutS domain I BSR55_07680 PF00375 Sodium:dicarboxylate symporter family BSR55_07715 PF08521 Two-component sensor kinase N-terminal BSR55_07715 PF00512 His Kinase A (phospho-acceptor) domain BSR55_07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_07720 PF00486 Transcriptional regulatory protein, C terminal BSR55_07720 PF00072 Response regulator receiver domain BSR55_07745 PF04403 Paraquat-inducible protein A BSR55_07750 PF02470 MlaD protein BSR55_07760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSR55_07780 PF01965 DJ-1/PfpI family BSR55_07800 PF07043 Protein of unknown function (DUF1328) BSR55_07810 PF00440 Bacterial regulatory proteins, tetR family BSR55_07815 PF07690 Major Facilitator Superfamily BSR55_07830 PF00083 Sugar (and other) transporter BSR55_07830 PF08946 Osmosensory transporter coiled coil BSR55_07835 PF16925 Tetracyclin repressor-like, C-terminal domain BSR55_07835 PF00440 Bacterial regulatory proteins, tetR family BSR55_07840 PF00109 Beta-ketoacyl synthase, N-terminal domain BSR55_07840 PF16197 Ketoacyl-synthetase C-terminal extension BSR55_07840 PF08659 KR domain BSR55_07840 PF00550 Phosphopantetheine attachment site BSR55_07840 PF00698 Acyl transferase domain BSR55_07840 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_07840 PF00107 Zinc-binding dehydrogenase BSR55_07840 PF14765 Polyketide synthase dehydratase BSR55_07840 PF02801 Beta-ketoacyl synthase, C-terminal domain BSR55_07860 PF00245 Alkaline phosphatase BSR55_07865 PF07729 FCD domain BSR55_07865 PF00392 Bacterial regulatory proteins, gntR family BSR55_07875 PF00083 Sugar (and other) transporter BSR55_07880 PF00701 Dihydrodipicolinate synthetase family BSR55_07885 PF00171 Aldehyde dehydrogenase family BSR55_07895 PF00892 EamA-like transporter family BSR55_07900 PF00083 Sugar (and other) transporter BSR55_07905 PF00892 EamA-like transporter family BSR55_07910 PF01965 DJ-1/PfpI family BSR55_07940 PF01266 FAD dependent oxidoreductase BSR55_07945 PF00083 Sugar (and other) transporter BSR55_07960 PF01266 FAD dependent oxidoreductase BSR55_07960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BSR55_07970 PF01266 FAD dependent oxidoreductase BSR55_07975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_07975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_07980 PF00171 Aldehyde dehydrogenase family BSR55_07985 PF02913 FAD linked oxidases, C-terminal domain BSR55_07985 PF01565 FAD binding domain BSR55_08000 PF00171 Aldehyde dehydrogenase family BSR55_08005 PF00465 Iron-containing alcohol dehydrogenase BSR55_08020 PF07690 Major Facilitator Superfamily BSR55_08025 PF12833 Helix-turn-helix domain BSR55_08035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSR55_08035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSR55_08045 PF01425 Amidase BSR55_08050 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BSR55_08060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BSR55_08060 PF00355 Rieske [2Fe-2S] domain BSR55_08075 PF00175 Oxidoreductase NAD-binding domain BSR55_08075 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_08080 PF01613 Flavin reductase like domain BSR55_08125 PF01804 Penicillin amidase BSR55_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_08130 PF03466 LysR substrate binding domain BSR55_08135 PF03573 outer membrane porin, OprD family BSR55_08145 PF00512 His Kinase A (phospho-acceptor) domain BSR55_08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_08145 PF08521 Two-component sensor kinase N-terminal BSR55_08150 PF00072 Response regulator receiver domain BSR55_08150 PF00486 Transcriptional regulatory protein, C terminal BSR55_08160 PF04185 Phosphoesterase family BSR55_08160 PF05506 Domain of unknown function (DUF756) BSR55_08185 PF07690 Major Facilitator Superfamily BSR55_08190 PF03466 LysR substrate binding domain BSR55_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_08195 PF07690 Major Facilitator Superfamily BSR55_08205 PF00529 HlyD membrane-fusion protein of T1SS BSR55_08205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSR55_08210 PF00873 AcrB/AcrD/AcrF family BSR55_08215 PF02321 Outer membrane efflux protein BSR55_08235 PF03707 Bacterial signalling protein N terminal repeat BSR55_08235 PF00990 Diguanylate cyclase, GGDEF domain BSR55_08235 PF00563 EAL domain BSR55_08240 PF03707 Bacterial signalling protein N terminal repeat BSR55_08240 PF00990 Diguanylate cyclase, GGDEF domain BSR55_08240 PF00563 EAL domain BSR55_08250 PF00271 Helicase conserved C-terminal domain BSR55_08250 PF04851 Type III restriction enzyme, res subunit BSR55_08250 PF02151 UvrB/uvrC motif BSR55_08250 PF12344 Ultra-violet resistance protein B BSR55_08250 PF17757 UvrB interaction domain BSR55_08260 PF00892 EamA-like transporter family BSR55_08270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BSR55_08270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSR55_08295 PF05368 NmrA-like family BSR55_08300 PF01638 HxlR-like helix-turn-helix BSR55_08310 PF08328 Adenylosuccinate lyase C-terminal BSR55_08310 PF00206 Lyase BSR55_08315 PF04356 Protein of unknown function (DUF489) BSR55_08325 PF00293 NUDIX domain BSR55_08350 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_08355 PF00768 D-alanyl-D-alanine carboxypeptidase BSR55_08355 PF07943 Penicillin-binding protein 5, C-terminal domain BSR55_08370 PF01975 Survival protein SurE BSR55_08375 PF01476 LysM domain BSR55_08375 PF01551 Peptidase family M23 BSR55_08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_08380 PF03466 LysR substrate binding domain BSR55_08385 PF00202 Aminotransferase class-III BSR55_08390 PF00462 Glutaredoxin BSR55_08395 PF13654 AAA domain BSR55_08395 PF05362 Lon protease (S16) C-terminal proteolytic domain BSR55_08400 PF07690 Major Facilitator Superfamily BSR55_08410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSR55_08415 PF13593 SBF-like CPA transporter family (DUF4137) BSR55_08420 PF01197 Ribosomal protein L31 BSR55_08435 PF04055 Radical SAM superfamily BSR55_08440 PF01132 Elongation factor P (EF-P) OB domain BSR55_08440 PF08207 Elongation factor P (EF-P) KOW-like domain BSR55_08440 PF09285 Elongation factor P, C-terminal BSR55_08445 PF02554 Carbon starvation protein CstA BSR55_08445 PF13722 5TM C-terminal transporter carbon starvation CstA BSR55_08450 PF04328 Selenoprotein, putative BSR55_08460 PF07726 ATPase family associated with various cellular activities (AAA) BSR55_08460 PF17863 AAA lid domain BSR55_08470 PF11992 Domain of unknown function (DUF3488) BSR55_08470 PF01841 Transglutaminase-like superfamily BSR55_08470 PF13559 Domain of unknown function (DUF4129) BSR55_08480 PF02661 Fic/DOC family BSR55_08480 PF13784 Fic/DOC family N-terminal BSR55_08490 PF00593 TonB dependent receptor BSR55_08490 PF07715 TonB-dependent Receptor Plug Domain BSR55_08505 PF00593 TonB dependent receptor BSR55_08505 PF07715 TonB-dependent Receptor Plug Domain BSR55_08515 PF13533 Biotin-lipoyl like BSR55_08520 PF00873 AcrB/AcrD/AcrF family BSR55_08525 PF00873 AcrB/AcrD/AcrF family BSR55_08530 PF02321 Outer membrane efflux protein BSR55_08540 PF00860 Permease family BSR55_08545 PF00962 Adenosine/AMP deaminase BSR55_08555 PF01292 Prokaryotic cytochrome b561 BSR55_08565 PF01351 Ribonuclease HII BSR55_08570 PF02599 Global regulator protein family BSR55_08575 PF00696 Amino acid kinase family BSR55_08575 PF01842 ACT domain BSR55_08575 PF13840 ACT domain BSR55_08580 PF02272 DHHA1 domain BSR55_08580 PF01411 tRNA synthetases class II (A) BSR55_08580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSR55_08595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSR55_08595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BSR55_08615 PF01037 Lrp/AsnC ligand binding domain BSR55_08630 PF01037 Lrp/AsnC ligand binding domain BSR55_08635 PF00857 Isochorismatase family BSR55_08645 PF13393 Histidyl-tRNA synthetase BSR55_08650 PF00709 Adenylosuccinate synthetase BSR55_08670 PF00248 Aldo/keto reductase family BSR55_08675 PF13545 Crp-like helix-turn-helix domain BSR55_08675 PF00027 Cyclic nucleotide-binding domain BSR55_08680 PF02566 OsmC-like protein BSR55_08690 PF00266 Aminotransferase class-V BSR55_08705 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_08715 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_08715 PF07724 AAA domain (Cdc48 subfamily) BSR55_08715 PF10431 C-terminal, D2-small domain, of ClpB protein BSR55_08715 PF02861 Clp amino terminal domain, pathogenicity island component BSR55_08715 PF17871 AAA lid domain BSR55_08735 PF01170 Putative RNA methylase family UPF0020 BSR55_08735 PF10672 S-adenosylmethionine-dependent methyltransferase BSR55_08735 PF02926 THUMP domain BSR55_08770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BSR55_08770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BSR55_08775 PF01979 Amidohydrolase family BSR55_08780 PF00691 OmpA family BSR55_08795 PF00392 Bacterial regulatory proteins, gntR family BSR55_08795 PF00155 Aminotransferase class I and II BSR55_08805 PF02390 Putative methyltransferase BSR55_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_08815 PF03466 LysR substrate binding domain BSR55_08835 PF03575 Peptidase family S51 BSR55_08870 PF00440 Bacterial regulatory proteins, tetR family BSR55_08885 PF01553 Acyltransferase BSR55_08890 PF01709 Transcriptional regulator BSR55_08905 PF00899 ThiF family BSR55_08910 PF03109 ABC1 family BSR55_08915 PF02152 Dihydroneopterin aldolase BSR55_08930 PF03232 Ubiquinone biosynthesis protein COQ7 BSR55_08935 PF07690 Major Facilitator Superfamily BSR55_08940 PF07244 Surface antigen variable number repeat BSR55_08940 PF01103 Surface antigen BSR55_08940 PF17243 POTRA domain TamA domain 1 BSR55_08955 PF00501 AMP-binding enzyme BSR55_08955 PF13193 AMP-binding enzyme C-terminal domain BSR55_08970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_08970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_08975 PF01435 Peptidase family M48 BSR55_08990 PF09424 Yqey-like protein BSR55_08995 PF01165 Ribosomal protein S21 BSR55_09000 PF00814 Glycoprotease family BSR55_09015 PF00710 Asparaginase, N-terminal BSR55_09015 PF17763 Glutaminase/Asparaginase C-terminal domain BSR55_09020 PF00155 Aminotransferase class I and II BSR55_09025 PF01641 SelR domain BSR55_09030 PF00255 Glutathione peroxidase BSR55_09035 PF12833 Helix-turn-helix domain BSR55_09035 PF02311 AraC-like ligand binding domain BSR55_09045 PF00873 AcrB/AcrD/AcrF family BSR55_09060 PF00313 'Cold-shock' DNA-binding domain BSR55_09065 PF01810 LysE type translocator BSR55_09075 PF00155 Aminotransferase class I and II BSR55_09080 PF08335 GlnD PII-uridylyltransferase BSR55_09080 PF01966 HD domain BSR55_09080 PF01909 Nucleotidyltransferase domain BSR55_09085 PF02222 ATP-grasp domain BSR55_09095 PF05437 Branched-chain amino acid transport protein (AzlD) BSR55_09100 PF03591 AzlC protein BSR55_09125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BSR55_09125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BSR55_09135 PF04717 Type VI secretion system, phage-baseplate injector BSR55_09155 PF06071 Protein of unknown function (DUF933) BSR55_09155 PF01926 50S ribosome-binding GTPase BSR55_09160 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_09165 PF00005 ABC transporter BSR55_09165 PF09383 NIL domain BSR55_09170 PF03180 NLPA lipoprotein BSR55_09175 PF03180 NLPA lipoprotein BSR55_09180 PF00296 Luciferase-like monooxygenase BSR55_09190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_09190 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BSR55_09230 PF06039 Malate:quinone oxidoreductase (Mqo) BSR55_09235 PF01037 Lrp/AsnC ligand binding domain BSR55_09240 PF00027 Cyclic nucleotide-binding domain BSR55_09240 PF00520 Ion transport protein BSR55_09255 PF00563 EAL domain BSR55_09255 PF00990 Diguanylate cyclase, GGDEF domain BSR55_09255 PF03707 Bacterial signalling protein N terminal repeat BSR55_09265 PF04284 Protein of unknown function (DUF441) BSR55_09270 PF02082 Transcriptional regulator BSR55_09275 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_09280 PF01479 S4 domain BSR55_09280 PF00849 RNA pseudouridylate synthase BSR55_09295 PF01479 S4 domain BSR55_09295 PF00849 RNA pseudouridylate synthase BSR55_09300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BSR55_09305 PF08676 MutL C terminal dimerisation domain BSR55_09305 PF01119 DNA mismatch repair protein, C-terminal domain BSR55_09315 PF17209 Hfq protein BSR55_09320 PF04717 Type VI secretion system, phage-baseplate injector BSR55_09345 PF00639 PPIC-type PPIASE domain BSR55_09345 PF09312 SurA N-terminal domain BSR55_09350 PF04453 LPS transport system D BSR55_09350 PF03968 OstA-like protein BSR55_09355 PF01636 Phosphotransferase enzyme family BSR55_09360 PF00483 Nucleotidyl transferase BSR55_09365 PF02527 rRNA small subunit methyltransferase G BSR55_09370 PF13614 AAA domain BSR55_09375 PF02195 ParB-like nuclease domain BSR55_09375 PF17762 HTH domain found in ParB protein BSR55_09380 PF01618 MotA/TolQ/ExbB proton channel family BSR55_09385 PF02472 Biopolymer transport protein ExbD/TolR BSR55_09390 PF00005 ABC transporter BSR55_09390 PF00664 ABC transporter transmembrane region BSR55_09395 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BSR55_09400 PF02348 Cytidylyltransferase BSR55_09405 PF09115 DNA polymerase III, delta subunit, C terminal BSR55_09415 PF01026 TatD related DNase BSR55_09430 PF02501 Type II secretion system (T2SS), protein I BSR55_09430 PF07963 Prokaryotic N-terminal methylation motif BSR55_09435 PF07963 Prokaryotic N-terminal methylation motif BSR55_09435 PF11612 Type II secretion system (T2SS), protein J BSR55_09440 PF03934 Type II secretion system (T2SS), protein K BSR55_09450 PF03167 Uracil DNA glycosylase superfamily BSR55_09460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BSR55_09470 PF02224 Cytidylate kinase BSR55_09475 PF00575 S1 RNA binding domain BSR55_09480 PF00216 Bacterial DNA-binding protein BSR55_09505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BSR55_09510 PF03956 Lysine exporter LysO BSR55_09515 PF00743 Flavin-binding monooxygenase-like BSR55_09525 PF03969 AFG1-like ATPase BSR55_09530 PF02386 Cation transport protein BSR55_09535 PF02254 TrkA-N domain BSR55_09535 PF02080 TrkA-C domain BSR55_09550 PF00585 C-terminal regulatory domain of Threonine dehydratase BSR55_09550 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_09555 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BSR55_09590 PF00990 Diguanylate cyclase, GGDEF domain BSR55_09590 PF17158 Membrane-associated sensor, integral membrane domain BSR55_09595 PF02774 Semialdehyde dehydrogenase, dimerisation domain BSR55_09595 PF01118 Semialdehyde dehydrogenase, NAD binding domain BSR55_09605 PF02617 ATP-dependent Clp protease adaptor protein ClpS BSR55_09610 PF17871 AAA lid domain BSR55_09610 PF07724 AAA domain (Cdc48 subfamily) BSR55_09610 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_09610 PF02861 Clp amino terminal domain, pathogenicity island component BSR55_09610 PF10431 C-terminal, D2-small domain, of ClpB protein BSR55_09615 PF13472 GDSL-like Lipase/Acylhydrolase family BSR55_09615 PF07859 alpha/beta hydrolase fold BSR55_09620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BSR55_09635 PF05958 tRNA (Uracil-5-)-methyltransferase BSR55_09640 PF03466 LysR substrate binding domain BSR55_09640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_09645 PF02824 TGS domain BSR55_09645 PF04607 Region found in RelA / SpoT proteins BSR55_09645 PF13291 ACT domain BSR55_09655 PF03466 LysR substrate binding domain BSR55_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_09660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_09660 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_09660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_09665 PF07690 Major Facilitator Superfamily BSR55_09670 PF02515 CoA-transferase family III BSR55_09675 PF17941 Polyphosphate kinase C-terminal domain 1 BSR55_09675 PF13089 Polyphosphate kinase N-terminal domain BSR55_09675 PF13090 Polyphosphate kinase C-terminal domain 2 BSR55_09675 PF02503 Polyphosphate kinase middle domain BSR55_09690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BSR55_09690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BSR55_09695 PF00440 Bacterial regulatory proteins, tetR family BSR55_09705 PF00285 Citrate synthase, C-terminal domain BSR55_09710 PF00550 Phosphopantetheine attachment site BSR55_09710 PF00857 Isochorismatase family BSR55_09730 PF01645 Conserved region in glutamate synthase BSR55_09740 PF08007 Cupin superfamily protein BSR55_09745 PF02545 Maf-like protein BSR55_09755 PF00162 Phosphoglycerate kinase BSR55_09765 PF01116 Fructose-bisphosphate aldolase class-II BSR55_09780 PF03691 Uncharacterised protein family (UPF0167) BSR55_09805 PF02542 YgbB family BSR55_09810 PF01649 Ribosomal protein S20 BSR55_09815 PF13460 NAD(P)H-binding BSR55_09820 PF03737 Aldolase/RraA BSR55_09850 PF02559 CarD-like/TRCF domain BSR55_09850 PF17757 UvrB interaction domain BSR55_09850 PF03461 TRCF domain BSR55_09850 PF00271 Helicase conserved C-terminal domain BSR55_09850 PF00270 DEAD/DEAH box helicase BSR55_09860 PF00211 Adenylate and Guanylate cyclase catalytic domain BSR55_09865 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_09870 PF00012 Hsp70 protein BSR55_09875 PF07743 HSCB C-terminal oligomerisation domain BSR55_09875 PF00226 DnaJ domain BSR55_09880 PF01521 Iron-sulphur cluster biosynthesis BSR55_09885 PF01592 NifU-like N terminal domain BSR55_09890 PF00266 Aminotransferase class-V BSR55_09895 PF02082 Transcriptional regulator BSR55_09910 PF00216 Bacterial DNA-binding protein BSR55_09915 PF09312 SurA N-terminal domain BSR55_09915 PF00639 PPIC-type PPIASE domain BSR55_09920 PF12833 Helix-turn-helix domain BSR55_09920 PF12852 Cupin BSR55_09925 PF00487 Fatty acid desaturase BSR55_09930 PF01638 HxlR-like helix-turn-helix BSR55_09935 PF04717 Type VI secretion system, phage-baseplate injector BSR55_09935 PF16671 Actin cross-linking domain BSR55_09985 PF02635 DsrE/DsrF-like family BSR55_09990 PF00589 Phage integrase family BSR55_10035 PF13185 GAF domain BSR55_10035 PF00990 Diguanylate cyclase, GGDEF domain BSR55_10095 PF13742 OB-fold nucleic acid binding domain BSR55_10095 PF02601 Exonuclease VII, large subunit BSR55_10105 PF00313 'Cold-shock' DNA-binding domain BSR55_10135 PF00313 'Cold-shock' DNA-binding domain BSR55_10210 PF07030 Protein of unknown function (DUF1320) BSR55_10315 PF13438 Domain of unknown function (DUF4113) BSR55_10315 PF11799 impB/mucB/samB family C-terminal domain BSR55_10315 PF00817 impB/mucB/samB family BSR55_10320 PF00717 Peptidase S24-like BSR55_10330 PF16363 GDP-mannose 4,6 dehydratase BSR55_10335 PF10415 Fumarase C C-terminus BSR55_10335 PF00206 Lyase BSR55_10355 PF01638 HxlR-like helix-turn-helix BSR55_10375 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_10375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_10375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_10375 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSR55_10380 PF12833 Helix-turn-helix domain BSR55_10395 PF01654 Cytochrome bd terminal oxidase subunit I BSR55_10400 PF02322 Cytochrome bd terminal oxidase subunit II BSR55_10405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BSR55_10415 PF00892 EamA-like transporter family BSR55_10435 PF00202 Aminotransferase class-III BSR55_10450 PF05656 Protein of unknown function (DUF805) BSR55_10455 PF04717 Type VI secretion system, phage-baseplate injector BSR55_10475 PF03466 LysR substrate binding domain BSR55_10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_10480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_10480 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_10480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_10495 PF00106 short chain dehydrogenase BSR55_10525 PF00892 EamA-like transporter family BSR55_10530 PF00155 Aminotransferase class I and II BSR55_10530 PF00392 Bacterial regulatory proteins, gntR family BSR55_10540 PF13091 PLD-like domain BSR55_10545 PF00107 Zinc-binding dehydrogenase BSR55_10545 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_10590 PF00005 ABC transporter BSR55_10590 PF12848 ABC transporter BSR55_10590 PF16326 ABC transporter C-terminal domain BSR55_10595 PF00155 Aminotransferase class I and II BSR55_10600 PF00561 alpha/beta hydrolase fold BSR55_10605 PF00892 EamA-like transporter family BSR55_10620 PF12832 MFS_1 like family BSR55_10625 PF04172 LrgB-like family BSR55_10630 PF03788 LrgA family BSR55_10635 PF03466 LysR substrate binding domain BSR55_10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_10675 PF01037 Lrp/AsnC ligand binding domain BSR55_10680 PF00892 EamA-like transporter family BSR55_10685 PF00378 Enoyl-CoA hydratase/isomerase BSR55_10690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_10690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_10690 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_10690 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSR55_10700 PF07690 Major Facilitator Superfamily BSR55_10710 PF01144 Coenzyme A transferase BSR55_10715 PF01144 Coenzyme A transferase BSR55_10720 PF07690 Major Facilitator Superfamily BSR55_10725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_10725 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_10725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_10730 PF00378 Enoyl-CoA hydratase/isomerase BSR55_10740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSR55_10740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSR55_10740 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BSR55_10745 PF00108 Thiolase, N-terminal domain BSR55_10745 PF02803 Thiolase, C-terminal domain BSR55_10750 PF09339 IclR helix-turn-helix domain BSR55_10755 PF07690 Major Facilitator Superfamily BSR55_10760 PF09339 IclR helix-turn-helix domain BSR55_10765 PF02515 CoA-transferase family III BSR55_10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_10770 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_10770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_10775 PF07690 Major Facilitator Superfamily BSR55_10790 PF01235 Sodium:alanine symporter family BSR55_10800 PF05544 Proline racemase BSR55_10810 PF01266 FAD dependent oxidoreductase BSR55_10815 PF00701 Dihydrodipicolinate synthetase family BSR55_10830 PF07715 TonB-dependent Receptor Plug Domain BSR55_10830 PF07660 Secretin and TonB N terminus short domain BSR55_10830 PF00593 TonB dependent receptor BSR55_10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_10835 PF03466 LysR substrate binding domain BSR55_10845 PF01494 FAD binding domain BSR55_10850 PF07715 TonB-dependent Receptor Plug Domain BSR55_10850 PF00593 TonB dependent receptor BSR55_10860 PF12833 Helix-turn-helix domain BSR55_10865 PF01161 Phosphatidylethanolamine-binding protein BSR55_10875 PF03069 Acetamidase/Formamidase family BSR55_10880 PF00083 Sugar (and other) transporter BSR55_10880 PF07690 Major Facilitator Superfamily BSR55_10890 PF00378 Enoyl-CoA hydratase/isomerase BSR55_10895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_10895 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_10895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_10900 PF13193 AMP-binding enzyme C-terminal domain BSR55_10900 PF00501 AMP-binding enzyme BSR55_10905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSR55_10905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSR55_10910 PF00171 Aldehyde dehydrogenase family BSR55_10915 PF03466 LysR substrate binding domain BSR55_10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_10935 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BSR55_10935 PF18381 YcaO cyclodehydratase C-terminal domain BSR55_10940 PF00892 EamA-like transporter family BSR55_10945 PF00355 Rieske [2Fe-2S] domain BSR55_10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_10950 PF03466 LysR substrate binding domain BSR55_10955 PF01494 FAD binding domain BSR55_10960 PF03561 Allantoicase repeat BSR55_10965 PF04115 Ureidoglycolate lyase BSR55_10975 PF00576 HIUase/Transthyretin family BSR55_11010 PF01476 LysM domain BSR55_11010 PF05257 CHAP domain BSR55_11015 PF01979 Amidohydrolase family BSR55_11015 PF00449 Urease alpha-subunit, N-terminal domain BSR55_11020 PF00699 Urease beta subunit BSR55_11025 PF00547 Urease, gamma subunit BSR55_11035 PF01774 UreD urease accessory protein BSR55_11045 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSR55_11050 PF01730 UreF BSR55_11055 PF05194 UreE urease accessory protein, C-terminal domain BSR55_11055 PF02814 UreE urease accessory protein, N-terminal domain BSR55_11060 PF00582 Universal stress protein family BSR55_11085 PF01264 Chorismate synthase BSR55_11090 PF05175 Methyltransferase small domain BSR55_11105 PF03109 ABC1 family BSR55_11110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_11110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_11110 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_11115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_11115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_11115 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_11120 PF00583 Acetyltransferase (GNAT) family BSR55_11130 PF02311 AraC-like ligand binding domain BSR55_11130 PF12833 Helix-turn-helix domain BSR55_11135 PF01597 Glycine cleavage H-protein BSR55_11140 PF00793 DAHP synthetase I family BSR55_11145 PF03707 Bacterial signalling protein N terminal repeat BSR55_11145 PF00990 Diguanylate cyclase, GGDEF domain BSR55_11145 PF00563 EAL domain BSR55_11150 PF00753 Metallo-beta-lactamase superfamily BSR55_11160 PF04143 Sulphur transport BSR55_11180 PF00916 Sulfate permease family BSR55_11180 PF01740 STAS domain BSR55_11185 PF00375 Sodium:dicarboxylate symporter family BSR55_11195 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BSR55_11200 PF02654 Cobalamin-5-phosphate synthase BSR55_11210 PF02277 Phosphoribosyltransferase BSR55_11215 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BSR55_11225 PF13419 Haloacid dehalogenase-like hydrolase BSR55_11240 PF00593 TonB dependent receptor BSR55_11240 PF07715 TonB-dependent Receptor Plug Domain BSR55_11245 PF07690 Major Facilitator Superfamily BSR55_11260 PF06276 Ferric iron reductase FhuF-like transporter BSR55_11260 PF04183 IucA / IucC family BSR55_11265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BSR55_11270 PF06276 Ferric iron reductase FhuF-like transporter BSR55_11270 PF04183 IucA / IucC family BSR55_11285 PF04073 Aminoacyl-tRNA editing domain BSR55_11290 PF01066 CDP-alcohol phosphatidyltransferase BSR55_11295 PF12146 Serine aminopeptidase, S33 BSR55_11295 PF12147 Putative methyltransferase BSR55_11300 PF00782 Dual specificity phosphatase, catalytic domain BSR55_11355 PF04717 Type VI secretion system, phage-baseplate injector BSR55_11370 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_11375 PF01553 Acyltransferase BSR55_11380 PF08241 Methyltransferase domain BSR55_11380 PF12697 Alpha/beta hydrolase family BSR55_11385 PF17925 Tetracyclin repressor-like, C-terminal domain BSR55_11385 PF00440 Bacterial regulatory proteins, tetR family BSR55_11415 PF00248 Aldo/keto reductase family BSR55_11420 PF03466 LysR substrate binding domain BSR55_11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_11425 PF06865 Pyrimidine/purine nucleoside phosphorylase BSR55_11430 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BSR55_11430 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSR55_11435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BSR55_11440 PF00149 Calcineurin-like phosphoesterase BSR55_11450 PF00881 Nitroreductase family BSR55_11455 PF01266 FAD dependent oxidoreductase BSR55_11470 PF01266 FAD dependent oxidoreductase BSR55_11475 PF01098 Cell cycle protein BSR55_11480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BSR55_11485 PF04977 Septum formation initiator BSR55_11490 PF00113 Enolase, C-terminal TIM barrel domain BSR55_11490 PF03952 Enolase, N-terminal domain BSR55_11495 PF00793 DAHP synthetase I family BSR55_11500 PF00117 Glutamine amidotransferase class-I BSR55_11500 PF06418 CTP synthase N-terminus BSR55_11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_11520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSR55_11530 PF00561 alpha/beta hydrolase fold BSR55_11540 PF07690 Major Facilitator Superfamily BSR55_11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_11545 PF03466 LysR substrate binding domain BSR55_11550 PF04444 Catechol dioxygenase N terminus BSR55_11550 PF00775 Dioxygenase BSR55_11555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BSR55_11555 PF00355 Rieske [2Fe-2S] domain BSR55_11560 PF00866 Ring hydroxylating beta subunit BSR55_11565 PF00970 Oxidoreductase FAD-binding domain BSR55_11565 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_11565 PF00175 Oxidoreductase NAD-binding domain BSR55_11570 PF00106 short chain dehydrogenase BSR55_11575 PF03594 Benzoate membrane transport protein BSR55_11595 PF00182 Chitinase class I BSR55_11605 PF00083 Sugar (and other) transporter BSR55_11625 PF02146 Sir2 family BSR55_11635 PF10415 Fumarase C C-terminus BSR55_11635 PF00206 Lyase BSR55_11640 PF00474 Sodium:solute symporter family BSR55_11645 PF01037 Lrp/AsnC ligand binding domain BSR55_11650 PF00171 Aldehyde dehydrogenase family BSR55_11650 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BSR55_11650 PF14850 DNA-binding domain of Proline dehydrogenase BSR55_11650 PF01619 Proline dehydrogenase BSR55_11660 PF00893 Small Multidrug Resistance protein BSR55_11670 PF00135 Carboxylesterase family BSR55_11685 PF11940 Domain of unknown function (DUF3458) Ig-like fold BSR55_11685 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BSR55_11685 PF01433 Peptidase family M1 domain BSR55_11695 PF02683 Cytochrome C biogenesis protein transmembrane region BSR55_11695 PF11412 Disulphide bond corrector protein DsbC BSR55_11700 PF00578 AhpC/TSA family BSR55_11705 PF13098 Thioredoxin-like domain BSR55_11715 PF01047 MarR family BSR55_11730 PF00717 Peptidase S24-like BSR55_11745 PF00817 impB/mucB/samB family BSR55_11745 PF11799 impB/mucB/samB family C-terminal domain BSR55_11745 PF13438 Domain of unknown function (DUF4113) BSR55_11750 PF01220 Dehydroquinase class II BSR55_11755 PF00364 Biotin-requiring enzyme BSR55_11760 PF00289 Biotin carboxylase, N-terminal domain BSR55_11760 PF02785 Biotin carboxylase C-terminal domain BSR55_11760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSR55_11770 PF00990 Diguanylate cyclase, GGDEF domain BSR55_11770 PF17151 Periplasmic sensor domain BSR55_11775 PF01425 Amidase BSR55_11780 PF01925 Sulfite exporter TauE/SafE BSR55_11785 PF00793 DAHP synthetase I family BSR55_11795 PF12561 ToxR activated gene A lipoprotein domain BSR55_11795 PF00041 Fibronectin type III domain BSR55_11805 PF00459 Inositol monophosphatase family BSR55_11815 PF13419 Haloacid dehalogenase-like hydrolase BSR55_11820 PF01479 S4 domain BSR55_11825 PF00154 recA bacterial DNA recombination protein BSR55_11830 PF00106 short chain dehydrogenase BSR55_11835 PF00501 AMP-binding enzyme BSR55_11835 PF13193 AMP-binding enzyme C-terminal domain BSR55_11840 PF02631 RecX family BSR55_11865 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BSR55_11865 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_11870 PF07977 FabA-like domain BSR55_11875 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_11875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BSR55_11885 PF07244 Surface antigen variable number repeat BSR55_11885 PF01103 Surface antigen BSR55_11890 PF02163 Peptidase family M50 BSR55_11890 PF17820 PDZ domain BSR55_11890 PF13180 PDZ domain BSR55_11895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BSR55_11895 PF13288 DXP reductoisomerase C-terminal domain BSR55_11895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BSR55_11905 PF01255 Putative undecaprenyl diphosphate synthase BSR55_11910 PF01765 Ribosome recycling factor BSR55_11915 PF00696 Amino acid kinase family BSR55_11920 PF04055 Radical SAM superfamily BSR55_11920 PF00919 Uncharacterized protein family UPF0004 BSR55_11920 PF18693 TRAM domain BSR55_11925 PF00989 PAS fold BSR55_11925 PF00512 His Kinase A (phospho-acceptor) domain BSR55_11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_11930 PF02954 Bacterial regulatory protein, Fis family BSR55_11930 PF00158 Sigma-54 interaction domain BSR55_11930 PF00072 Response regulator receiver domain BSR55_11940 PF06078 Bacterial protein of unknown function (DUF937) BSR55_11955 PF02684 Lipid-A-disaccharide synthetase BSR55_11960 PF00593 TonB dependent receptor BSR55_11960 PF07715 TonB-dependent Receptor Plug Domain BSR55_11980 PF01070 FMN-dependent dehydrogenase BSR55_11985 PF00664 ABC transporter transmembrane region BSR55_11985 PF00005 ABC transporter BSR55_11990 PF12802 MarR family BSR55_11995 PF02253 Phospholipase A1 BSR55_12000 PF08367 Peptidase M16C associated BSR55_12000 PF05193 Peptidase M16 inactive domain BSR55_12000 PF00675 Insulinase (Peptidase family M16) BSR55_12010 PF13673 Acetyltransferase (GNAT) domain BSR55_12015 PF00294 pfkB family carbohydrate kinase BSR55_12030 PF02525 Flavodoxin-like fold BSR55_12040 PF01654 Cytochrome bd terminal oxidase subunit I BSR55_12045 PF02322 Cytochrome bd terminal oxidase subunit II BSR55_12050 PF08173 Membrane bound YbgT-like protein BSR55_12090 PF02110 Hydroxyethylthiazole kinase family BSR55_12105 PF00884 Sulfatase BSR55_12110 PF01169 Uncharacterized protein family UPF0016 BSR55_12115 PF14493 Helix-turn-helix domain BSR55_12115 PF05970 PIF1-like helicase BSR55_12130 PF03466 LysR substrate binding domain BSR55_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_12135 PF00923 Transaldolase/Fructose-6-phosphate aldolase BSR55_12140 PF01810 LysE type translocator BSR55_12145 PF03594 Benzoate membrane transport protein BSR55_12150 PF00557 Metallopeptidase family M24 BSR55_12155 PF05525 Branched-chain amino acid transport protein BSR55_12175 PF03741 Integral membrane protein TerC family BSR55_12175 PF03471 Transporter associated domain BSR55_12195 PF01274 Malate synthase BSR55_12205 PF02881 SRP54-type protein, helical bundle domain BSR55_12205 PF00448 SRP54-type protein, GTPase domain BSR55_12210 PF00675 Insulinase (Peptidase family M16) BSR55_12210 PF05193 Peptidase M16 inactive domain BSR55_12240 PF00571 CBS domain BSR55_12240 PF01380 SIS domain BSR55_12250 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_12260 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_12260 PF17862 AAA+ lid domain BSR55_12260 PF01434 Peptidase family M41 BSR55_12270 PF05166 YcgL domain BSR55_12275 PF00570 HRDC domain BSR55_12275 PF01612 3'-5' exonuclease BSR55_12280 PF13662 Toprim domain BSR55_12280 PF02132 RecR protein BSR55_12285 PF02575 YbaB/EbfC DNA-binding family BSR55_12290 PF01053 Cys/Met metabolism PLP-dependent enzyme BSR55_12300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSR55_12300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSR55_12310 PF01230 HIT domain BSR55_12365 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BSR55_12365 PF01565 FAD binding domain BSR55_12370 PF01451 Low molecular weight phosphotyrosine protein phosphatase BSR55_12375 PF00465 Iron-containing alcohol dehydrogenase BSR55_12385 PF03061 Thioesterase superfamily BSR55_12390 PF02308 MgtC family BSR55_12395 PF12169 DNA polymerase III subunits gamma and tau domain III BSR55_12395 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BSR55_12395 PF12170 DNA polymerase III tau subunit V interacting with alpha BSR55_12405 PF07690 Major Facilitator Superfamily BSR55_12430 PF00108 Thiolase, N-terminal domain BSR55_12430 PF02803 Thiolase, C-terminal domain BSR55_12440 PF00465 Iron-containing alcohol dehydrogenase BSR55_12445 PF00106 short chain dehydrogenase BSR55_12455 PF02954 Bacterial regulatory protein, Fis family BSR55_12460 PF00171 Aldehyde dehydrogenase family BSR55_12475 PF03466 LysR substrate binding domain BSR55_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_12490 PF00106 short chain dehydrogenase BSR55_12495 PF00440 Bacterial regulatory proteins, tetR family BSR55_12500 PF00117 Glutamine amidotransferase class-I BSR55_12500 PF00958 GMP synthase C terminal domain BSR55_12500 PF02540 NAD synthase BSR55_12505 PF03891 Domain of unknown function (DUF333) BSR55_12515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BSR55_12515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BSR55_12525 PF04264 YceI-like domain BSR55_12540 PF02779 Transketolase, pyrimidine binding domain BSR55_12540 PF00456 Transketolase, thiamine diphosphate binding domain BSR55_12540 PF02780 Transketolase, C-terminal domain BSR55_12545 PF02773 S-adenosylmethionine synthetase, C-terminal domain BSR55_12545 PF02772 S-adenosylmethionine synthetase, central domain BSR55_12545 PF00438 S-adenosylmethionine synthetase, N-terminal domain BSR55_12560 PF01810 LysE type translocator BSR55_12575 PF02075 Crossover junction endodeoxyribonuclease RuvC BSR55_12590 PF00708 Acylphosphatase BSR55_12595 PF01256 Carbohydrate kinase BSR55_12595 PF03853 YjeF-related protein N-terminus BSR55_12600 PF08331 Domain of unknown function (DUF1730) BSR55_12605 PF06968 Biotin and Thiamin Synthesis associated domain BSR55_12605 PF04055 Radical SAM superfamily BSR55_12615 PF00156 Phosphoribosyl transferase domain BSR55_12625 PF01180 Dihydroorotate dehydrogenase BSR55_12645 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BSR55_12645 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BSR55_12650 PF00881 Nitroreductase family BSR55_12660 PF00271 Helicase conserved C-terminal domain BSR55_12660 PF00270 DEAD/DEAH box helicase BSR55_12665 PF00313 'Cold-shock' DNA-binding domain BSR55_12675 PF00140 Sigma-70 factor, region 1.2 BSR55_12675 PF04542 Sigma-70 region 2 BSR55_12675 PF04545 Sigma-70, region 4 BSR55_12680 PF04241 Protein of unknown function (DUF423) BSR55_12690 PF05690 Thiazole biosynthesis protein ThiG BSR55_12710 PF03992 Antibiotic biosynthesis monooxygenase BSR55_12715 PF02525 Flavodoxin-like fold BSR55_12720 PF00043 Glutathione S-transferase, C-terminal domain BSR55_12720 PF02798 Glutathione S-transferase, N-terminal domain BSR55_12725 PF00916 Sulfate permease family BSR55_12725 PF01740 STAS domain BSR55_12730 PF00072 Response regulator receiver domain BSR55_12730 PF00196 Bacterial regulatory proteins, luxR family BSR55_12735 PF07730 Histidine kinase BSR55_12745 PF00501 AMP-binding enzyme BSR55_12745 PF13193 AMP-binding enzyme C-terminal domain BSR55_12750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_12750 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_12750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_12755 PF00106 short chain dehydrogenase BSR55_12760 PF12833 Helix-turn-helix domain BSR55_12785 PF01062 Bestrophin, RFP-TM, chloride channel BSR55_12790 PF17827 PrmC N-terminal domain BSR55_12790 PF13847 Methyltransferase domain BSR55_12795 PF03462 PCRF domain BSR55_12795 PF00472 RF-1 domain BSR55_12815 PF00296 Luciferase-like monooxygenase BSR55_12820 PF05360 yiaA/B two helix domain BSR55_12835 PF03618 Kinase/pyrophosphorylase BSR55_12840 PF02896 PEP-utilising enzyme, TIM barrel domain BSR55_12840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BSR55_12840 PF00391 PEP-utilising enzyme, mobile domain BSR55_12850 PF06481 COX Aromatic Rich Motif BSR55_12850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSR55_12855 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSR55_12860 PF00510 Cytochrome c oxidase subunit III BSR55_12865 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BSR55_12870 PF01040 UbiA prenyltransferase family BSR55_12880 PF01965 DJ-1/PfpI family BSR55_12880 PF12833 Helix-turn-helix domain BSR55_12890 PF01250 Ribosomal protein S6 BSR55_12895 PF01084 Ribosomal protein S18 BSR55_12900 PF03948 Ribosomal protein L9, C-terminal domain BSR55_12900 PF01281 Ribosomal protein L9, N-terminal domain BSR55_12905 PF00772 DnaB-like helicase N terminal domain BSR55_12905 PF03796 DnaB-like helicase C terminal domain BSR55_12915 PF00842 Alanine racemase, C-terminal domain BSR55_12915 PF01168 Alanine racemase, N-terminal domain BSR55_12935 PF01841 Transglutaminase-like superfamily BSR55_12935 PF08379 Bacterial transglutaminase-like N-terminal region BSR55_12945 PF14403 Circularly permuted ATP-grasp type 2 BSR55_12960 PF13932 GidA associated domain BSR55_12960 PF01134 Glucose inhibited division protein A BSR55_12985 PF02954 Bacterial regulatory protein, Fis family BSR55_12990 PF01808 AICARFT/IMPCHase bienzyme BSR55_12990 PF02142 MGS-like domain BSR55_12995 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BSR55_12995 PF02844 Phosphoribosylglycinamide synthetase, N domain BSR55_12995 PF02843 Phosphoribosylglycinamide synthetase, C domain BSR55_13005 PF00665 Integrase core domain BSR55_13005 PF13276 HTH-like domain BSR55_13005 PF13333 Integrase core domain BSR55_13015 PF03180 NLPA lipoprotein BSR55_13020 PF09383 NIL domain BSR55_13020 PF00005 ABC transporter BSR55_13025 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_13035 PF00753 Metallo-beta-lactamase superfamily BSR55_13035 PF16123 Hydroxyacylglutathione hydrolase C-terminus BSR55_13270 PF01381 Helix-turn-helix BSR55_13270 PF08671 Anti-repressor SinI BSR55_13325 PF07733 Bacterial DNA polymerase III alpha NTPase domain BSR55_13325 PF14579 Helix-hairpin-helix motif BSR55_13325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BSR55_13325 PF01336 OB-fold nucleic acid binding domain BSR55_13325 PF02811 PHP domain BSR55_13330 PF00588 SpoU rRNA Methylase family BSR55_13335 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_13380 PF03883 Peroxide stress protein YaaA BSR55_13390 PF00158 Sigma-54 interaction domain BSR55_13390 PF06956 Regulator of RNA terminal phosphate cyclase BSR55_13395 PF00753 Metallo-beta-lactamase superfamily BSR55_13415 PF01139 tRNA-splicing ligase RtcB BSR55_13430 PF01137 RNA 3'-terminal phosphate cyclase BSR55_13430 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain BSR55_13450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BSR55_13455 PF00800 Prephenate dehydratase BSR55_13455 PF01842 ACT domain BSR55_13455 PF01817 Chorismate mutase type II BSR55_13460 PF01965 DJ-1/PfpI family BSR55_13470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_13470 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_13470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_13475 PF08496 Peptidase family S49 N-terminal BSR55_13475 PF01343 Peptidase family S49 BSR55_13480 PF00375 Sodium:dicarboxylate symporter family BSR55_13485 PF00005 ABC transporter BSR55_13490 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_13495 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_13515 PF01596 O-methyltransferase BSR55_13530 PF01205 Uncharacterized protein family UPF0029 BSR55_13535 PF17803 Bacterial cadherin-like domain BSR55_13630 PF03968 OstA-like protein BSR55_13645 PF00571 CBS domain BSR55_13645 PF01380 SIS domain BSR55_13650 PF01406 tRNA synthetases class I (C) catalytic domain BSR55_13650 PF09190 DALR domain BSR55_13655 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BSR55_13655 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BSR55_13660 PF02803 Thiolase, C-terminal domain BSR55_13660 PF00108 Thiolase, N-terminal domain BSR55_13665 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_13665 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSR55_13665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_13665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_13670 PF00440 Bacterial regulatory proteins, tetR family BSR55_13670 PF08360 QacR-like protein, C-terminal region BSR55_13675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_13675 PF03466 LysR substrate binding domain BSR55_13680 PF00106 short chain dehydrogenase BSR55_13685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_13685 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_13685 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BSR55_13690 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BSR55_13690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_13695 PF00296 Luciferase-like monooxygenase BSR55_13705 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BSR55_13715 PF00266 Aminotransferase class-V BSR55_13735 PF13533 Biotin-lipoyl like BSR55_13750 PF00375 Sodium:dicarboxylate symporter family BSR55_13770 PF02769 AIR synthase related protein, C-terminal domain BSR55_13770 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BSR55_13770 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BSR55_13785 PF01966 HD domain BSR55_13795 PF01330 RuvA N terminal domain BSR55_13795 PF07499 RuvA, C-terminal domain BSR55_13800 PF17864 RuvB AAA lid domain BSR55_13800 PF05491 RuvB C-terminal winged helix domain BSR55_13800 PF05496 Holliday junction DNA helicase RuvB P-loop domain BSR55_13805 PF07715 TonB-dependent Receptor Plug Domain BSR55_13805 PF00593 TonB dependent receptor BSR55_13825 PF03061 Thioesterase superfamily BSR55_13830 PF01618 MotA/TolQ/ExbB proton channel family BSR55_13835 PF02472 Biopolymer transport protein ExbD/TolR BSR55_13855 PF07676 WD40-like Beta Propeller Repeat BSR55_13855 PF04052 TolB amino-terminal domain BSR55_13860 PF00691 OmpA family BSR55_13875 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BSR55_13880 PF00588 SpoU rRNA Methylase family BSR55_13880 PF08032 RNA 2'-O ribose methyltransferase substrate binding BSR55_13965 PF00117 Glutamine amidotransferase class-I BSR55_13970 PF02885 Glycosyl transferase family, helical bundle domain BSR55_13970 PF00591 Glycosyl transferase family, a/b domain BSR55_13975 PF00218 Indole-3-glycerol phosphate synthase BSR55_14010 PF00440 Bacterial regulatory proteins, tetR family BSR55_14025 PF00106 short chain dehydrogenase BSR55_14030 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_14030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_14030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_14035 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BSR55_14040 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BSR55_14045 PF13520 Amino acid permease BSR55_14065 PF05675 Protein of unknown function (DUF817) BSR55_14070 PF01208 Uroporphyrinogen decarboxylase (URO-D) BSR55_14080 PF17954 Quercetinase C-terminal cupin domain BSR55_14080 PF02678 Pirin BSR55_14085 PF00596 Class II Aldolase and Adducin N-terminal domain BSR55_14090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSR55_14090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSR55_14095 PF00860 Permease family BSR55_14100 PF01613 Flavin reductase like domain BSR55_14105 PF01042 Endoribonuclease L-PSP BSR55_14110 PF00857 Isochorismatase family BSR55_14115 PF00296 Luciferase-like monooxygenase BSR55_14125 PF12697 Alpha/beta hydrolase family BSR55_14130 PF00717 Peptidase S24-like BSR55_14145 PF00005 ABC transporter BSR55_14160 PF00893 Small Multidrug Resistance protein BSR55_14170 PF01425 Amidase BSR55_14175 PF01402 Ribbon-helix-helix protein, copG family BSR55_14175 PF08753 NikR C terminal nickel binding domain BSR55_14180 PF01638 HxlR-like helix-turn-helix BSR55_14185 PF02525 Flavodoxin-like fold BSR55_14190 PF02785 Biotin carboxylase C-terminal domain BSR55_14190 PF00289 Biotin carboxylase, N-terminal domain BSR55_14190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSR55_14210 PF03466 LysR substrate binding domain BSR55_14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_14215 PF02677 Epoxyqueuosine reductase QueH BSR55_14220 PF02219 Methylenetetrahydrofolate reductase BSR55_14225 PF02627 Carboxymuconolactone decarboxylase family BSR55_14230 PF00005 ABC transporter BSR55_14230 PF03459 TOBE domain BSR55_14235 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_14245 PF03454 MoeA C-terminal region (domain IV) BSR55_14245 PF00994 Probable molybdopterin binding domain BSR55_14245 PF03453 MoeA N-terminal region (domain I and II) BSR55_14250 PF01967 MoaC family BSR55_14250 PF00994 Probable molybdopterin binding domain BSR55_14255 PF02391 MoaE protein BSR55_14265 PF04055 Radical SAM superfamily BSR55_14265 PF06463 Molybdenum Cofactor Synthesis C BSR55_14270 PF12804 MobA-like NTP transferase domain BSR55_14275 PF01568 Molydopterin dinucleotide binding domain BSR55_14275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSR55_14275 PF04324 BFD-like [2Fe-2S] binding domain BSR55_14275 PF00384 Molybdopterin oxidoreductase BSR55_14280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_14280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BSR55_14280 PF04324 BFD-like [2Fe-2S] binding domain BSR55_14280 PF18267 Rubredoxin NAD+ reductase C-terminal domain BSR55_14280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BSR55_14285 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_14285 PF04324 BFD-like [2Fe-2S] binding domain BSR55_14285 PF18267 Rubredoxin NAD+ reductase C-terminal domain BSR55_14285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BSR55_14285 PF13806 Rieske-like [2Fe-2S] domain BSR55_14285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BSR55_14290 PF07690 Major Facilitator Superfamily BSR55_14300 PF00005 ABC transporter BSR55_14305 PF04371 Porphyromonas-type peptidyl-arginine deiminase BSR55_14310 PF00324 Amino acid permease BSR55_14320 PF00202 Aminotransferase class-III BSR55_14325 PF07687 Peptidase dimerisation domain BSR55_14325 PF01546 Peptidase family M20/M25/M40 BSR55_14335 PF00155 Aminotransferase class I and II BSR55_14335 PF00392 Bacterial regulatory proteins, gntR family BSR55_14340 PF00593 TonB dependent receptor BSR55_14340 PF07715 TonB-dependent Receptor Plug Domain BSR55_14345 PF01047 MarR family BSR55_14355 PF00324 Amino acid permease BSR55_14360 PF00171 Aldehyde dehydrogenase family BSR55_14365 PF00202 Aminotransferase class-III BSR55_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_14370 PF03466 LysR substrate binding domain BSR55_14385 PF13953 PapC C-terminal domain BSR55_14385 PF13954 PapC N-terminal domain BSR55_14385 PF00577 Outer membrane usher protein BSR55_14390 PF02753 Pili assembly chaperone PapD, C-terminal domain BSR55_14390 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BSR55_14395 PF16970 Type-1 fimbrial protein, A BSR55_14400 PF00561 alpha/beta hydrolase fold BSR55_14410 PF01636 Phosphotransferase enzyme family BSR55_14415 PF00324 Amino acid permease BSR55_14430 PF00171 Aldehyde dehydrogenase family BSR55_14435 PF00202 Aminotransferase class-III BSR55_14445 PF00155 Aminotransferase class I and II BSR55_14445 PF00392 Bacterial regulatory proteins, gntR family BSR55_14450 PF00324 Amino acid permease BSR55_14505 PF00202 Aminotransferase class-III BSR55_14520 PF01042 Endoribonuclease L-PSP BSR55_14535 PF07687 Peptidase dimerisation domain BSR55_14535 PF01546 Peptidase family M20/M25/M40 BSR55_14540 PF00171 Aldehyde dehydrogenase family BSR55_14545 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_14545 PF00107 Zinc-binding dehydrogenase BSR55_14550 PF02264 LamB porin BSR55_14555 PF00171 Aldehyde dehydrogenase family BSR55_14560 PF02653 Branched-chain amino acid transport system / permease component BSR55_14565 PF00005 ABC transporter BSR55_14575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BSR55_14580 PF01380 SIS domain BSR55_14580 PF01418 Helix-turn-helix domain, rpiR family BSR55_14585 PF13419 Haloacid dehalogenase-like hydrolase BSR55_14590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSR55_14590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSR55_14595 PF00171 Aldehyde dehydrogenase family BSR55_14605 PF01842 ACT domain BSR55_14605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_14605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_14615 PF02416 mttA/Hcf106 family BSR55_14620 PF02416 mttA/Hcf106 family BSR55_14625 PF00902 Sec-independent protein translocase protein (TatC) BSR55_14675 PF04829 Pre-toxin domain with VENN motif BSR55_14675 PF05860 haemagglutination activity domain BSR55_14675 PF13332 Hemagglutinin repeat BSR55_14675 PF05594 Haemagluttinin repeat BSR55_14715 PF04829 Pre-toxin domain with VENN motif BSR55_14715 PF05860 haemagglutination activity domain BSR55_14715 PF13332 Hemagglutinin repeat BSR55_14715 PF13018 Extended Signal Peptide of Type V secretion system BSR55_14715 PF05860 haemagglutination activity domain BSR55_14715 PF13018 Extended Signal Peptide of Type V secretion system BSR55_14715 PF04829 Pre-toxin domain with VENN motif BSR55_14715 PF13332 Hemagglutinin repeat BSR55_14720 PF08479 POTRA domain, ShlB-type BSR55_14720 PF17287 POTRA domain BSR55_14720 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BSR55_14740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSR55_14740 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_14750 PF09330 D-lactate dehydrogenase, membrane binding BSR55_14750 PF01565 FAD binding domain BSR55_14755 PF01070 FMN-dependent dehydrogenase BSR55_14760 PF00392 Bacterial regulatory proteins, gntR family BSR55_14760 PF07729 FCD domain BSR55_14765 PF02652 L-lactate permease BSR55_14770 PF00892 EamA-like transporter family BSR55_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_14775 PF03466 LysR substrate binding domain BSR55_14780 PF00764 Arginosuccinate synthase BSR55_14800 PF00180 Isocitrate/isopropylmalate dehydrogenase BSR55_14805 PF00849 RNA pseudouridylate synthase BSR55_14810 PF03971 Monomeric isocitrate dehydrogenase BSR55_14815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_14815 PF09317 Domain of unknown function (DUF1974) BSR55_14815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_14855 PF01425 Amidase BSR55_14875 PF05221 S-adenosyl-L-homocysteine hydrolase BSR55_14875 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BSR55_14880 PF02219 Methylenetetrahydrofolate reductase BSR55_14885 PF04452 RNA methyltransferase BSR55_14890 PF03707 Bacterial signalling protein N terminal repeat BSR55_14890 PF00990 Diguanylate cyclase, GGDEF domain BSR55_14890 PF00563 EAL domain BSR55_14895 PF00390 Malic enzyme, N-terminal domain BSR55_14895 PF03949 Malic enzyme, NAD binding domain BSR55_14895 PF01515 Phosphate acetyl/butaryl transferase BSR55_14900 PF01743 Poly A polymerase head domain BSR55_14900 PF12627 Probable RNA and SrmB- binding site of polymerase A BSR55_14920 PF00152 tRNA synthetases class II (D, K and N) BSR55_14925 PF11890 Domain of unknown function (DUF3410) BSR55_14925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_14925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_14935 PF00689 Cation transporting ATPase, C-terminus BSR55_14935 PF00690 Cation transporter/ATPase, N-terminus BSR55_14940 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_14940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSR55_14945 PF04055 Radical SAM superfamily BSR55_14960 PF00576 HIUase/Transthyretin family BSR55_14970 PF07943 Penicillin-binding protein 5, C-terminal domain BSR55_14970 PF00768 D-alanyl-D-alanine carboxypeptidase BSR55_14975 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_14980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSR55_14985 PF03441 FAD binding domain of DNA photolyase BSR55_14985 PF00875 DNA photolyase BSR55_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_15000 PF03466 LysR substrate binding domain BSR55_15005 PF01042 Endoribonuclease L-PSP BSR55_15015 PF00248 Aldo/keto reductase family BSR55_15020 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BSR55_15025 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BSR55_15030 PF11967 Recombination protein O N terminal BSR55_15030 PF02565 Recombination protein O C terminal BSR55_15040 PF07650 KH domain BSR55_15040 PF01926 50S ribosome-binding GTPase BSR55_15045 PF00035 Double-stranded RNA binding motif BSR55_15045 PF14622 Ribonuclease-III-like BSR55_15055 PF10502 Signal peptidase, peptidase S26 BSR55_15060 PF03144 Elongation factor Tu domain 2 BSR55_15060 PF00679 Elongation factor G C-terminus BSR55_15060 PF00009 Elongation factor Tu GTP binding domain BSR55_15060 PF06421 GTP-binding protein LepA C-terminus BSR55_15070 PF00535 Glycosyl transferase family 2 BSR55_15075 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BSR55_15080 PF01569 PAP2 superfamily BSR55_15090 PF13180 PDZ domain BSR55_15095 PF02910 Fumarate reductase flavoprotein C-term BSR55_15095 PF00890 FAD binding domain BSR55_15100 PF12833 Helix-turn-helix domain BSR55_15100 PF12852 Cupin BSR55_15125 PF02223 Thymidylate kinase BSR55_15130 PF02618 YceG-like family BSR55_15135 PF01063 Amino-transferase class IV BSR55_15150 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_15155 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_15160 PF12857 TOBE-like domain BSR55_15160 PF00005 ABC transporter BSR55_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_15165 PF03466 LysR substrate binding domain BSR55_15180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BSR55_15180 PF14602 Hexapeptide repeat of succinyl-transferase BSR55_15180 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_15185 PF04055 Radical SAM superfamily BSR55_15190 PF06508 Queuosine biosynthesis protein QueC BSR55_15205 PF00578 AhpC/TSA family BSR55_15215 PF03466 LysR substrate binding domain BSR55_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_15240 PF00043 Glutathione S-transferase, C-terminal domain BSR55_15240 PF02798 Glutathione S-transferase, N-terminal domain BSR55_15245 PF03466 LysR substrate binding domain BSR55_15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_15255 PF01467 Cytidylyltransferase-like BSR55_15255 PF00293 NUDIX domain BSR55_15260 PF00378 Enoyl-CoA hydratase/isomerase BSR55_15265 PF00881 Nitroreductase family BSR55_15270 PF01784 NIF3 (NGG1p interacting factor 3) BSR55_15285 PF03989 DNA gyrase C-terminal domain, beta-propeller BSR55_15285 PF00521 DNA gyrase/topoisomerase IV, subunit A BSR55_15305 PF01012 Electron transfer flavoprotein domain BSR55_15305 PF00766 Electron transfer flavoprotein FAD-binding domain BSR55_15310 PF01012 Electron transfer flavoprotein domain BSR55_15315 PF01810 LysE type translocator BSR55_15320 PF01037 Lrp/AsnC ligand binding domain BSR55_15325 PF13302 Acetyltransferase (GNAT) domain BSR55_15330 PF13302 Acetyltransferase (GNAT) domain BSR55_15360 PF02899 Phage integrase, N-terminal SAM-like domain BSR55_15360 PF00589 Phage integrase family BSR55_15365 PF04389 Peptidase family M28 BSR55_15370 PF02590 Predicted SPOUT methyltransferase BSR55_15375 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BSR55_15390 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSR55_15390 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BSR55_15395 PF04060 Putative Fe-S cluster BSR55_15400 PF10576 Iron-sulfur binding domain of endonuclease III BSR55_15400 PF00730 HhH-GPD superfamily base excision DNA repair protein BSR55_15400 PF00633 Helix-hairpin-helix motif BSR55_15415 PF05191 Adenylate kinase, active site lid BSR55_15430 PF00905 Penicillin binding protein transpeptidase domain BSR55_15430 PF03717 Penicillin-binding Protein dimerisation domain BSR55_15460 PF02629 CoA binding domain BSR55_15460 PF00549 CoA-ligase BSR55_15465 PF00549 CoA-ligase BSR55_15465 PF08442 ATP-grasp domain BSR55_15470 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_15470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSR55_15475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSR55_15475 PF00364 Biotin-requiring enzyme BSR55_15475 PF02817 e3 binding domain BSR55_15480 PF02779 Transketolase, pyrimidine binding domain BSR55_15480 PF16870 2-oxoglutarate dehydrogenase C-terminal BSR55_15480 PF16078 2-oxoglutarate dehydrogenase N-terminus BSR55_15480 PF00676 Dehydrogenase E1 component BSR55_15485 PF13085 2Fe-2S iron-sulfur cluster binding domain BSR55_15490 PF00890 FAD binding domain BSR55_15490 PF02910 Fumarate reductase flavoprotein C-term BSR55_15495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BSR55_15500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BSR55_15505 PF00285 Citrate synthase, C-terminal domain BSR55_15510 PF00854 POT family BSR55_15535 PF00743 Flavin-binding monooxygenase-like BSR55_15540 PF00106 short chain dehydrogenase BSR55_15570 PF02540 NAD synthase BSR55_15570 PF00795 Carbon-nitrogen hydrolase BSR55_15585 PF01527 Transposase BSR55_15600 PF00809 Pterin binding enzyme BSR55_15605 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_15605 PF17862 AAA+ lid domain BSR55_15605 PF01434 Peptidase family M41 BSR55_15605 PF06480 FtsH Extracellular BSR55_15610 PF01728 FtsJ-like methyltransferase BSR55_15615 PF01985 CRS1 / YhbY (CRM) domain BSR55_15635 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BSR55_15635 PF00117 Glutamine amidotransferase class-I BSR55_15640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSR55_15640 PF02142 MGS-like domain BSR55_15640 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSR55_15645 PF03449 Transcription elongation factor, N-terminal BSR55_15645 PF01272 Transcription elongation factor, GreA/GreB, C-term BSR55_15650 PF04072 Leucine carboxyl methyltransferase BSR55_15655 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_15660 PF00324 Amino acid permease BSR55_15670 PF02798 Glutathione S-transferase, N-terminal domain BSR55_15670 PF14497 Glutathione S-transferase, C-terminal domain BSR55_15680 PF01144 Coenzyme A transferase BSR55_15685 PF01144 Coenzyme A transferase BSR55_15695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSR55_15705 PF00378 Enoyl-CoA hydratase/isomerase BSR55_15715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BSR55_15720 PF00561 alpha/beta hydrolase fold BSR55_15725 PF00999 Sodium/hydrogen exchanger family BSR55_15730 PF04228 Putative neutral zinc metallopeptidase BSR55_15735 PF05661 Protein of unknown function (DUF808) BSR55_15740 PF00579 tRNA synthetases class I (W and Y) BSR55_15745 PF00152 tRNA synthetases class II (D, K and N) BSR55_15745 PF01336 OB-fold nucleic acid binding domain BSR55_15765 PF00156 Phosphoribosyl transferase domain BSR55_15770 PF00301 Rubredoxin BSR55_15775 PF18113 Rubredoxin binding C-terminal domain BSR55_15775 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_15780 PF12697 Alpha/beta hydrolase family BSR55_15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_15785 PF03466 LysR substrate binding domain BSR55_15790 PF07690 Major Facilitator Superfamily BSR55_15820 PF13089 Polyphosphate kinase N-terminal domain BSR55_15820 PF17941 Polyphosphate kinase C-terminal domain 1 BSR55_15820 PF13090 Polyphosphate kinase C-terminal domain 2 BSR55_15820 PF02503 Polyphosphate kinase middle domain BSR55_15825 PF00912 Transglycosylase BSR55_15830 PF01694 Rhomboid family BSR55_15840 PF00005 ABC transporter BSR55_15845 PF13472 GDSL-like Lipase/Acylhydrolase family BSR55_15905 PF01507 Phosphoadenosine phosphosulfate reductase family BSR55_15910 PF06974 Protein of unknown function (DUF1298) BSR55_15910 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BSR55_15915 PF00575 S1 RNA binding domain BSR55_15915 PF10150 Ribonuclease E/G family BSR55_15920 PF02545 Maf-like protein BSR55_15925 PF04093 rod shape-determining protein MreD BSR55_15930 PF04085 rod shape-determining protein MreC BSR55_15940 PF02686 Glu-tRNAGln amidotransferase C subunit BSR55_15945 PF01425 Amidase BSR55_15950 PF02934 GatB/GatE catalytic domain BSR55_15950 PF02637 GatB domain BSR55_15985 PF05163 DinB family BSR55_16005 PF01431 Peptidase family M13 BSR55_16005 PF05649 Peptidase family M13 BSR55_16010 PF03466 LysR substrate binding domain BSR55_16010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_16040 PF03466 LysR substrate binding domain BSR55_16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_16045 PF13378 Enolase C-terminal domain-like BSR55_16045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSR55_16050 PF02426 Muconolactone delta-isomerase BSR55_16055 PF04444 Catechol dioxygenase N terminus BSR55_16055 PF00775 Dioxygenase BSR55_16060 PF01144 Coenzyme A transferase BSR55_16065 PF01144 Coenzyme A transferase BSR55_16070 PF00108 Thiolase, N-terminal domain BSR55_16070 PF02803 Thiolase, C-terminal domain BSR55_16075 PF12146 Serine aminopeptidase, S33 BSR55_16080 PF02954 Bacterial regulatory protein, Fis family BSR55_16080 PF06505 Activator of aromatic catabolism BSR55_16080 PF00158 Sigma-54 interaction domain BSR55_16080 PF02830 V4R domain BSR55_16085 PF06099 Phenol hydroxylase subunit BSR55_16090 PF02332 Methane/Phenol/Toluene Hydroxylase BSR55_16095 PF02406 MmoB/DmpM family BSR55_16100 PF02332 Methane/Phenol/Toluene Hydroxylase BSR55_16100 PF04945 YHS domain BSR55_16110 PF00175 Oxidoreductase NAD-binding domain BSR55_16110 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_16110 PF00970 Oxidoreductase FAD-binding domain BSR55_16115 PF00775 Dioxygenase BSR55_16115 PF04444 Catechol dioxygenase N terminus BSR55_16125 PF13411 MerR HTH family regulatory protein BSR55_16145 PF00106 short chain dehydrogenase BSR55_16150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSR55_16150 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_16155 PF07660 Secretin and TonB N terminus short domain BSR55_16155 PF07715 TonB-dependent Receptor Plug Domain BSR55_16155 PF00593 TonB dependent receptor BSR55_16160 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSR55_16160 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSR55_16175 PF00419 Fimbrial protein BSR55_16185 PF02753 Pili assembly chaperone PapD, C-terminal domain BSR55_16185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BSR55_16190 PF13954 PapC N-terminal domain BSR55_16190 PF00577 Outer membrane usher protein BSR55_16190 PF13953 PapC C-terminal domain BSR55_16195 PF00419 Fimbrial protein BSR55_16200 PF00419 Fimbrial protein BSR55_16205 PF00419 Fimbrial protein BSR55_16210 PF12833 Helix-turn-helix domain BSR55_16210 PF02311 AraC-like ligand binding domain BSR55_16220 PF00419 Fimbrial protein BSR55_16230 PF02753 Pili assembly chaperone PapD, C-terminal domain BSR55_16230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BSR55_16235 PF00577 Outer membrane usher protein BSR55_16235 PF13954 PapC N-terminal domain BSR55_16235 PF13953 PapC C-terminal domain BSR55_16240 PF00419 Fimbrial protein BSR55_16250 PF12833 Helix-turn-helix domain BSR55_16260 PF00970 Oxidoreductase FAD-binding domain BSR55_16260 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_16260 PF00175 Oxidoreductase NAD-binding domain BSR55_16265 PF00171 Aldehyde dehydrogenase family BSR55_16270 PF00355 Rieske [2Fe-2S] domain BSR55_16270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BSR55_16275 PF07859 alpha/beta hydrolase fold BSR55_16280 PF02028 BCCT, betaine/carnitine/choline family transporter BSR55_16285 PF00180 Isocitrate/isopropylmalate dehydrogenase BSR55_16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_16290 PF03466 LysR substrate binding domain BSR55_16305 PF03781 Sulfatase-modifying factor enzyme 1 BSR55_16310 PF03781 Sulfatase-modifying factor enzyme 1 BSR55_16325 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_16325 PF00107 Zinc-binding dehydrogenase BSR55_16335 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_16335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSR55_16340 PF02817 e3 binding domain BSR55_16340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSR55_16340 PF00364 Biotin-requiring enzyme BSR55_16345 PF02779 Transketolase, pyrimidine binding domain BSR55_16345 PF02780 Transketolase, C-terminal domain BSR55_16350 PF00676 Dehydrogenase E1 component BSR55_16355 PF04055 Radical SAM superfamily BSR55_16365 PF00155 Aminotransferase class I and II BSR55_16365 PF00392 Bacterial regulatory proteins, gntR family BSR55_16370 PF03594 Benzoate membrane transport protein BSR55_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_16380 PF00672 HAMP domain BSR55_16380 PF00512 His Kinase A (phospho-acceptor) domain BSR55_16390 PF00486 Transcriptional regulatory protein, C terminal BSR55_16390 PF00072 Response regulator receiver domain BSR55_16395 PF00529 HlyD membrane-fusion protein of T1SS BSR55_16395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSR55_16400 PF00873 AcrB/AcrD/AcrF family BSR55_16405 PF02321 Outer membrane efflux protein BSR55_16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_16415 PF03466 LysR substrate binding domain BSR55_16450 PF03527 RHS protein BSR55_16510 PF00155 Aminotransferase class I and II BSR55_16510 PF00392 Bacterial regulatory proteins, gntR family BSR55_16515 PF00117 Glutamine amidotransferase class-I BSR55_16515 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BSR55_16520 PF00202 Aminotransferase class-III BSR55_16530 PF01168 Alanine racemase, N-terminal domain BSR55_16535 PF09084 NMT1/THI5 like BSR55_16540 PF00990 Diguanylate cyclase, GGDEF domain BSR55_16540 PF07694 5TMR of 5TMR-LYT BSR55_16545 PF13302 Acetyltransferase (GNAT) domain BSR55_16555 PF00155 Aminotransferase class I and II BSR55_16555 PF00392 Bacterial regulatory proteins, gntR family BSR55_16560 PF02627 Carboxymuconolactone decarboxylase family BSR55_16565 PF00171 Aldehyde dehydrogenase family BSR55_16575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BSR55_16580 PF00171 Aldehyde dehydrogenase family BSR55_16585 PF00296 Luciferase-like monooxygenase BSR55_16590 PF01613 Flavin reductase like domain BSR55_16595 PF12697 Alpha/beta hydrolase family BSR55_16615 PF07715 TonB-dependent Receptor Plug Domain BSR55_16615 PF00593 TonB dependent receptor BSR55_16620 PF01497 Periplasmic binding protein BSR55_16625 PF00005 ABC transporter BSR55_16630 PF01032 FecCD transport family BSR55_16635 PF01032 FecCD transport family BSR55_16640 PF00005 ABC transporter BSR55_16645 PF00664 ABC transporter transmembrane region BSR55_16645 PF04954 Siderophore-interacting protein BSR55_16645 PF08021 Siderophore-interacting FAD-binding domain BSR55_16645 PF00005 ABC transporter BSR55_16660 PF00376 MerR family regulatory protein BSR55_16660 PF09278 MerR, DNA binding BSR55_16675 PF00873 AcrB/AcrD/AcrF family BSR55_16680 PF00196 Bacterial regulatory proteins, luxR family BSR55_16680 PF03472 Autoinducer binding domain BSR55_16685 PF01965 DJ-1/PfpI family BSR55_16700 PF01638 HxlR-like helix-turn-helix BSR55_16705 PF01494 FAD binding domain BSR55_16710 PF09339 IclR helix-turn-helix domain BSR55_16710 PF01614 Bacterial transcriptional regulator BSR55_16715 PF07715 TonB-dependent Receptor Plug Domain BSR55_16715 PF07660 Secretin and TonB N terminus short domain BSR55_16715 PF00593 TonB dependent receptor BSR55_16725 PF06826 Predicted Permease Membrane Region BSR55_16725 PF02080 TrkA-C domain BSR55_16730 PF00155 Aminotransferase class I and II BSR55_16740 PF02028 BCCT, betaine/carnitine/choline family transporter BSR55_16750 PF03358 NADPH-dependent FMN reductase BSR55_16755 PF01758 Sodium Bile acid symporter family BSR55_16765 PF01022 Bacterial regulatory protein, arsR family BSR55_16770 PF03960 ArsC family BSR55_16790 PF08281 Sigma-70, region 4 BSR55_16790 PF04542 Sigma-70 region 2 BSR55_16800 PF05114 Protein of unknown function (DUF692) BSR55_16825 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain BSR55_16840 PF00593 TonB dependent receptor BSR55_16840 PF07715 TonB-dependent Receptor Plug Domain BSR55_16860 PF07715 TonB-dependent Receptor Plug Domain BSR55_16860 PF00593 TonB dependent receptor BSR55_16875 PF01425 Amidase BSR55_16945 PF13356 Arm DNA-binding domain BSR55_16945 PF00589 Phage integrase family BSR55_16955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSR55_16955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSR55_16960 PF01327 Polypeptide deformylase BSR55_16970 PF00083 Sugar (and other) transporter BSR55_16970 PF08946 Osmosensory transporter coiled coil BSR55_16975 PF17151 Periplasmic sensor domain BSR55_16975 PF00990 Diguanylate cyclase, GGDEF domain BSR55_16985 PF04973 Nicotinamide mononucleotide transporter BSR55_16990 PF07290 Protein of unknown function (DUF1449) BSR55_16995 PF01145 SPFH domain / Band 7 family BSR55_16995 PF15975 Flotillin BSR55_17005 PF02028 BCCT, betaine/carnitine/choline family transporter BSR55_17010 PF00440 Bacterial regulatory proteins, tetR family BSR55_17010 PF13977 BetI-type transcriptional repressor, C-terminal BSR55_17015 PF00171 Aldehyde dehydrogenase family BSR55_17030 PF00664 ABC transporter transmembrane region BSR55_17030 PF00005 ABC transporter BSR55_17045 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BSR55_17050 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSR55_17050 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSR55_17055 PF07969 Amidohydrolase family BSR55_17065 PF01553 Acyltransferase BSR55_17080 PF01810 LysE type translocator BSR55_17085 PF17854 FtsK alpha domain BSR55_17085 PF09397 Ftsk gamma domain BSR55_17085 PF01580 FtsK/SpoIIIE family BSR55_17085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BSR55_17090 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_17095 PF10119 Predicted methyltransferase regulatory domain BSR55_17095 PF13847 Methyltransferase domain BSR55_17100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BSR55_17105 PF04376 Arginine-tRNA-protein transferase, N terminus BSR55_17105 PF04377 Arginine-tRNA-protein transferase, C terminus BSR55_17110 PF00583 Acetyltransferase (GNAT) family BSR55_17120 PF00009 Elongation factor Tu GTP binding domain BSR55_17120 PF03144 Elongation factor Tu domain 2 BSR55_17120 PF03143 Elongation factor Tu C-terminal domain BSR55_17125 PF03764 Elongation factor G, domain IV BSR55_17125 PF14492 Elongation Factor G, domain II BSR55_17125 PF00679 Elongation factor G C-terminus BSR55_17125 PF03144 Elongation factor Tu domain 2 BSR55_17125 PF00009 Elongation factor Tu GTP binding domain BSR55_17135 PF00177 Ribosomal protein S7p/S5e BSR55_17140 PF00164 Ribosomal protein S12/S23 BSR55_17150 PF07728 AAA domain (dynein-related subfamily) BSR55_17160 PF05762 VWA domain containing CoxE-like protein BSR55_17170 PF13569 Domain of unknown function (DUF4132) BSR55_17175 PF00109 Beta-ketoacyl synthase, N-terminal domain BSR55_17175 PF02801 Beta-ketoacyl synthase, C-terminal domain BSR55_17220 PF01757 Acyltransferase family BSR55_17225 PF00324 Amino acid permease BSR55_17230 PF01042 Endoribonuclease L-PSP BSR55_17235 PF00842 Alanine racemase, C-terminal domain BSR55_17235 PF01168 Alanine racemase, N-terminal domain BSR55_17240 PF01266 FAD dependent oxidoreductase BSR55_17245 PF01037 Lrp/AsnC ligand binding domain BSR55_17255 PF13419 Haloacid dehalogenase-like hydrolase BSR55_17260 PF08543 Phosphomethylpyrimidine kinase BSR55_17260 PF03070 TENA/THI-4/PQQC family BSR55_17260 PF02581 Thiamine monophosphate synthase BSR55_17270 PF12833 Helix-turn-helix domain BSR55_17275 PF01810 LysE type translocator BSR55_17280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BSR55_17280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BSR55_17285 PF00893 Small Multidrug Resistance protein BSR55_17290 PF00893 Small Multidrug Resistance protein BSR55_17300 PF05275 Copper resistance protein B precursor (CopB) BSR55_17305 PF07732 Multicopper oxidase BSR55_17305 PF07731 Multicopper oxidase BSR55_17305 PF00394 Multicopper oxidase BSR55_17315 PF00834 Ribulose-phosphate 3 epimerase family BSR55_17325 PF05987 Bacterial protein of unknown function (DUF898) BSR55_17330 PF00756 Putative esterase BSR55_17340 PF04445 Putative SAM-dependent methyltransferase BSR55_17345 PF02673 Bacitracin resistance protein BacA BSR55_17350 PF00814 Glycoprotease family BSR55_17355 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_17360 PF00293 NUDIX domain BSR55_17400 PF00425 chorismate binding enzyme BSR55_17400 PF04715 Anthranilate synthase component I, N terminal region BSR55_17405 PF00155 Aminotransferase class I and II BSR55_17410 PF00815 Histidinol dehydrogenase BSR55_17420 PF01634 ATP phosphoribosyltransferase BSR55_17425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BSR55_17430 PF01722 BolA-like protein BSR55_17435 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BSR55_17440 PF00309 Sigma-54 factor, Activator interacting domain (AID) BSR55_17440 PF04552 Sigma-54, DNA binding domain BSR55_17440 PF04963 Sigma-54 factor, core binding domain BSR55_17445 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSR55_17450 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_17455 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_17460 PF00005 ABC transporter BSR55_17465 PF05643 Putative bacterial lipoprotein (DUF799) BSR55_17475 PF03783 Curli production assembly/transport component CsgG BSR55_17485 PF06100 MCRA family BSR55_17500 PF08241 Methyltransferase domain BSR55_17515 PF00440 Bacterial regulatory proteins, tetR family BSR55_17515 PF08361 MAATS-type transcriptional repressor, C-terminal region BSR55_17525 PF13533 Biotin-lipoyl like BSR55_17530 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_17540 PF05552 Conserved TM helix BSR55_17555 PF07690 Major Facilitator Superfamily BSR55_17560 PF12805 FUSC-like inner membrane protein yccS BSR55_17570 PF00258 Flavodoxin BSR55_17570 PF00667 FAD binding domain BSR55_17570 PF00175 Oxidoreductase NAD-binding domain BSR55_17625 PF04304 Protein of unknown function (DUF454) BSR55_17640 PF01546 Peptidase family M20/M25/M40 BSR55_17640 PF07687 Peptidase dimerisation domain BSR55_17645 PF11818 C-terminal domain of tail specific protease (DUF3340) BSR55_17645 PF00595 PDZ domain BSR55_17645 PF03572 Peptidase family S41 BSR55_17645 PF17804 Tail specific protease N-terminal domain BSR55_17650 PF00933 Glycosyl hydrolase family 3 N terminal domain BSR55_17665 PF00171 Aldehyde dehydrogenase family BSR55_17670 PF00871 Acetokinase family BSR55_17675 PF01515 Phosphate acetyl/butaryl transferase BSR55_17675 PF07085 DRTGG domain BSR55_17680 PF00593 TonB dependent receptor BSR55_17680 PF07715 TonB-dependent Receptor Plug Domain BSR55_17690 PF05683 Fumarase C-terminus BSR55_17690 PF05681 Fumarate hydratase (Fumerase) BSR55_17720 PF10431 C-terminal, D2-small domain, of ClpB protein BSR55_17720 PF07724 AAA domain (Cdc48 subfamily) BSR55_17720 PF06689 ClpX C4-type zinc finger BSR55_17725 PF00574 Clp protease BSR55_17730 PF05698 Bacterial trigger factor protein (TF) C-terminus BSR55_17730 PF05697 Bacterial trigger factor protein (TF) BSR55_17730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSR55_17735 PF00593 TonB dependent receptor BSR55_17735 PF07715 TonB-dependent Receptor Plug Domain BSR55_17740 PF07715 TonB-dependent Receptor Plug Domain BSR55_17740 PF00593 TonB dependent receptor BSR55_17745 PF18331 PKHD-type hydroxylase C-terminal domain BSR55_17745 PF13640 2OG-Fe(II) oxygenase superfamily BSR55_17750 PF01070 FMN-dependent dehydrogenase BSR55_17755 PF08502 LeuA allosteric (dimerisation) domain BSR55_17755 PF00682 HMGL-like BSR55_17760 PF00561 alpha/beta hydrolase fold BSR55_17765 PF00561 alpha/beta hydrolase fold BSR55_17765 PF07021 Methionine biosynthesis protein MetW BSR55_17790 PF01725 Ham1 family BSR55_17800 PF02416 mttA/Hcf106 family BSR55_17805 PF02416 mttA/Hcf106 family BSR55_17810 PF00902 Sec-independent protein translocase protein (TatC) BSR55_17825 PF01790 Prolipoprotein diacylglyceryl transferase BSR55_17845 PF09234 Domain of unknown function (DUF1963) BSR55_17850 PF00303 Thymidylate synthase BSR55_17855 PF00186 Dihydrofolate reductase BSR55_17875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSR55_17875 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSR55_17875 PF00403 Heavy-metal-associated domain BSR55_17910 PF17152 Periplasmic sensor domain BSR55_17910 PF00990 Diguanylate cyclase, GGDEF domain BSR55_17940 PF02445 Quinolinate synthetase A protein BSR55_17945 PF01960 ArgJ family BSR55_17955 PF07517 SecA DEAD-like domain BSR55_17955 PF01043 SecA preprotein cross-linking domain BSR55_17955 PF07516 SecA Wing and Scaffold domain BSR55_17955 PF02810 SEC-C motif BSR55_17960 PF10417 C-terminal domain of 1-Cys peroxiredoxin BSR55_17960 PF00578 AhpC/TSA family BSR55_17965 PF04972 BON domain BSR55_17965 PF01476 LysM domain BSR55_17970 PF00550 Phosphopantetheine attachment site BSR55_17980 PF00698 Acyl transferase domain BSR55_17985 PF01783 Ribosomal L32p protein family BSR55_17990 PF02620 Large ribosomal RNA subunit accumulation protein YceD BSR55_17995 PF04315 Elongation factor P hydroxylase BSR55_18000 PF01300 Telomere recombination BSR55_18005 PF06629 MltA-interacting protein MipA BSR55_18010 PF00753 Metallo-beta-lactamase superfamily BSR55_18025 PF02875 Mur ligase family, glutamate ligase domain BSR55_18025 PF08245 Mur ligase middle domain BSR55_18030 PF01039 Carboxyl transferase domain BSR55_18035 PF00290 Tryptophan synthase alpha chain BSR55_18065 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BSR55_18065 PF12833 Helix-turn-helix domain BSR55_18085 PF00378 Enoyl-CoA hydratase/isomerase BSR55_18085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSR55_18085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSR55_18090 PF02803 Thiolase, C-terminal domain BSR55_18090 PF00108 Thiolase, N-terminal domain BSR55_18100 PF00583 Acetyltransferase (GNAT) family BSR55_18105 PF07411 Domain of unknown function (DUF1508) BSR55_18125 PF00155 Aminotransferase class I and II BSR55_18130 PF04055 Radical SAM superfamily BSR55_18130 PF00202 Aminotransferase class-III BSR55_18130 PF06968 Biotin and Thiamin Synthesis associated domain BSR55_18135 PF12697 Alpha/beta hydrolase family BSR55_18145 PF00578 AhpC/TSA family BSR55_18150 PF00210 Ferritin-like domain BSR55_18155 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BSR55_18160 PF00593 TonB dependent receptor BSR55_18160 PF07715 TonB-dependent Receptor Plug Domain BSR55_18170 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BSR55_18170 PF03120 NAD-dependent DNA ligase OB-fold domain BSR55_18170 PF01653 NAD-dependent DNA ligase adenylation domain BSR55_18170 PF00533 BRCA1 C Terminus (BRCT) domain BSR55_18170 PF12826 Helix-hairpin-helix motif BSR55_18180 PF02463 RecF/RecN/SMC N terminal domain BSR55_18180 PF06470 SMC proteins Flexible Hinge Domain BSR55_18190 PF01925 Sulfite exporter TauE/SafE BSR55_18200 PF03309 Type III pantothenate kinase BSR55_18210 PF06821 Serine hydrolase BSR55_18215 PF00448 SRP54-type protein, GTPase domain BSR55_18215 PF02881 SRP54-type protein, helical bundle domain BSR55_18215 PF02978 Signal peptide binding domain BSR55_18235 PF01207 Dihydrouridine synthase (Dus) BSR55_18295 PF04717 Type VI secretion system, phage-baseplate injector BSR55_18320 PF13419 Haloacid dehalogenase-like hydrolase BSR55_18325 PF00585 C-terminal regulatory domain of Threonine dehydratase BSR55_18325 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_18330 PF13673 Acetyltransferase (GNAT) domain BSR55_18345 PF03006 Haemolysin-III related BSR55_18350 PF07690 Major Facilitator Superfamily BSR55_18350 PF00083 Sugar (and other) transporter BSR55_18355 PF00849 RNA pseudouridylate synthase BSR55_18360 PF02785 Biotin carboxylase C-terminal domain BSR55_18360 PF00364 Biotin-requiring enzyme BSR55_18360 PF00289 Biotin carboxylase, N-terminal domain BSR55_18360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSR55_18365 PF00378 Enoyl-CoA hydratase/isomerase BSR55_18370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_18370 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_18370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_18375 PF01039 Carboxyl transferase domain BSR55_18390 PF17932 Tetracyclin repressor-like, C-terminal domain BSR55_18390 PF00440 Bacterial regulatory proteins, tetR family BSR55_18400 PF01850 PIN domain BSR55_18405 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BSR55_18410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_18410 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_18410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_18415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_18415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSR55_18415 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_18420 PF00176 SNF2 family N-terminal domain BSR55_18420 PF12419 SNF2 Helicase protein BSR55_18420 PF00271 Helicase conserved C-terminal domain BSR55_18465 PF01066 CDP-alcohol phosphatidyltransferase BSR55_18470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BSR55_18490 PF00056 lactate/malate dehydrogenase, NAD binding domain BSR55_18490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BSR55_18500 PF01464 Transglycosylase SLT domain BSR55_18500 PF10145 Phage-related minor tail protein BSR55_18500 PF01551 Peptidase family M23 BSR55_18505 PF04055 Radical SAM superfamily BSR55_18505 PF01938 TRAM domain BSR55_18505 PF00919 Uncharacterized protein family UPF0004 BSR55_18510 PF02562 PhoH-like protein BSR55_18515 PF02130 Uncharacterized protein family UPF0054 BSR55_18520 PF02811 PHP domain BSR55_18525 PF04279 Intracellular septation protein A BSR55_18530 PF03795 YCII-related domain BSR55_18540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BSR55_18540 PF01266 FAD dependent oxidoreductase BSR55_18545 PF00581 Rhodanese-like domain BSR55_18550 PF04461 Protein of unknown function (DUF520) BSR55_18565 PF03061 Thioesterase superfamily BSR55_18570 PF00085 Thioredoxin BSR55_18580 PF00753 Metallo-beta-lactamase superfamily BSR55_18580 PF04273 Putative phosphatase (DUF442) BSR55_18590 PF01625 Peptide methionine sulfoxide reductase BSR55_18600 PF01618 MotA/TolQ/ExbB proton channel family BSR55_18610 PF00551 Formyl transferase BSR55_18610 PF01842 ACT domain BSR55_18615 PF08360 QacR-like protein, C-terminal region BSR55_18615 PF00440 Bacterial regulatory proteins, tetR family BSR55_18620 PF00171 Aldehyde dehydrogenase family BSR55_18625 PF00830 Ribosomal L28 family BSR55_18630 PF00471 Ribosomal protein L33 BSR55_18635 PF02254 TrkA-N domain BSR55_18635 PF00999 Sodium/hydrogen exchanger family BSR55_18655 PF13361 UvrD-like helicase C-terminal domain BSR55_18655 PF00580 UvrD/REP helicase N-terminal domain BSR55_18660 PF02595 Glycerate kinase family BSR55_18685 PF08272 Topoisomerase I zinc-ribbon-like BSR55_18685 PF01751 Toprim domain BSR55_18685 PF01131 DNA topoisomerase BSR55_18685 PF01396 Topoisomerase DNA binding C4 zinc finger BSR55_18695 PF01638 HxlR-like helix-turn-helix BSR55_18710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSR55_18710 PF02785 Biotin carboxylase C-terminal domain BSR55_18710 PF00364 Biotin-requiring enzyme BSR55_18710 PF00289 Biotin carboxylase, N-terminal domain BSR55_18720 PF07286 Protein of unknown function (DUF1445) BSR55_18725 PF03746 LamB/YcsF family BSR55_18730 PF01566 Natural resistance-associated macrophage protein BSR55_18735 PF03466 LysR substrate binding domain BSR55_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_18775 PF01661 Macro domain BSR55_18780 PF03279 Bacterial lipid A biosynthesis acyltransferase BSR55_18800 PF01118 Semialdehyde dehydrogenase, NAD binding domain BSR55_18800 PF02774 Semialdehyde dehydrogenase, dimerisation domain BSR55_18820 PF01416 tRNA pseudouridine synthase BSR55_18830 PF01176 Translation initiation factor 1A / IF-1 BSR55_18840 PF00180 Isocitrate/isopropylmalate dehydrogenase BSR55_18850 PF00694 Aconitase C-terminal domain BSR55_18855 PF00330 Aconitase family (aconitate hydratase) BSR55_18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_18870 PF03466 LysR substrate binding domain BSR55_18885 PF00293 NUDIX domain BSR55_18890 PF00391 PEP-utilising enzyme, mobile domain BSR55_18890 PF02896 PEP-utilising enzyme, TIM barrel domain BSR55_18890 PF05524 PEP-utilising enzyme, N-terminal BSR55_18890 PF01590 GAF domain BSR55_18900 PF00691 OmpA family BSR55_18900 PF05736 OprF membrane domain BSR55_18910 PF02770 Acyl-CoA dehydrogenase, middle domain BSR55_18910 PF18158 Adaptive response protein AidB N-terminal domain BSR55_18910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSR55_18920 PF06628 Catalase-related immune-responsive BSR55_18920 PF00199 Catalase BSR55_18945 PF12706 Beta-lactamase superfamily domain BSR55_18960 PF03466 LysR substrate binding domain BSR55_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_18975 PF13280 WYL domain BSR55_18975 PF08279 HTH domain BSR55_18980 PF13419 Haloacid dehalogenase-like hydrolase BSR55_18985 PF00849 RNA pseudouridylate synthase BSR55_18985 PF01479 S4 domain BSR55_18990 PF00575 S1 RNA binding domain BSR55_18990 PF10150 Ribonuclease E/G family BSR55_18990 PF12111 Polyribonucleotide phosphorylase C terminal BSR55_18995 PF00501 AMP-binding enzyme BSR55_18995 PF13193 AMP-binding enzyme C-terminal domain BSR55_19025 PF04024 PspC domain BSR55_19030 PF00571 CBS domain BSR55_19055 PF02091 Glycyl-tRNA synthetase alpha subunit BSR55_19060 PF02092 Glycyl-tRNA synthetase beta subunit BSR55_19060 PF05746 DALR anticodon binding domain BSR55_19090 PF00872 Transposase, Mutator family BSR55_19100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_19100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_19125 PF08241 Methyltransferase domain BSR55_19145 PF01209 ubiE/COQ5 methyltransferase family BSR55_19160 PF01594 AI-2E family transporter BSR55_19165 PF00080 Copper/zinc superoxide dismutase (SODC) BSR55_19170 PF01278 Omptin family BSR55_19180 PF12805 FUSC-like inner membrane protein yccS BSR55_19190 PF12823 Domain of unknown function (DUF3817) BSR55_19195 PF07690 Major Facilitator Superfamily BSR55_19205 PF05726 Pirin C-terminal cupin domain BSR55_19205 PF02678 Pirin BSR55_19215 PF07478 D-ala D-ala ligase C-terminus BSR55_19215 PF01820 D-ala D-ala ligase N-terminus BSR55_19230 PF02913 FAD linked oxidases, C-terminal domain BSR55_19230 PF01565 FAD binding domain BSR55_19235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSR55_19235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSR55_19240 PF00892 EamA-like transporter family BSR55_19250 PF00149 Calcineurin-like phosphoesterase BSR55_19260 PF00892 EamA-like transporter family BSR55_19270 PF01925 Sulfite exporter TauE/SafE BSR55_19275 PF01509 TruB family pseudouridylate synthase (N terminal domain) BSR55_19275 PF16198 tRNA pseudouridylate synthase B C-terminal domain BSR55_19275 PF09157 Pseudouridine synthase II TruB, C-terminal BSR55_19280 PF03280 Proteobacterial lipase chaperone protein BSR55_19285 PF00561 alpha/beta hydrolase fold BSR55_19290 PF00561 alpha/beta hydrolase fold BSR55_19295 PF00561 alpha/beta hydrolase fold BSR55_19300 PF00561 alpha/beta hydrolase fold BSR55_19305 PF01245 Ribosomal protein L19 BSR55_19310 PF01746 tRNA (Guanine-1)-methyltransferase BSR55_19315 PF01782 RimM N-terminal domain BSR55_19315 PF05239 PRC-barrel domain BSR55_19320 PF00886 Ribosomal protein S16 BSR55_19325 PF00114 Pilin (bacterial filament) BSR55_19325 PF07963 Prokaryotic N-terminal methylation motif BSR55_19355 PF00114 Pilin (bacterial filament) BSR55_19355 PF07963 Prokaryotic N-terminal methylation motif BSR55_19390 PF07963 Prokaryotic N-terminal methylation motif BSR55_19395 PF02401 LytB protein BSR55_19400 PF00625 Guanylate kinase BSR55_19405 PF01192 RNA polymerase Rpb6 BSR55_19410 PF13291 ACT domain BSR55_19410 PF04607 Region found in RelA / SpoT proteins BSR55_19410 PF02824 TGS domain BSR55_19415 PF01042 Endoribonuclease L-PSP BSR55_19420 PF04324 BFD-like [2Fe-2S] binding domain BSR55_19425 PF00210 Ferritin-like domain BSR55_19430 PF11846 Virulence factor membrane-bound polymerase, C-terminal BSR55_19430 PF15864 Protein glycosylation ligase BSR55_19430 PF04932 O-Antigen ligase BSR55_19435 PF00114 Pilin (bacterial filament) BSR55_19435 PF07963 Prokaryotic N-terminal methylation motif BSR55_19445 PF00114 Pilin (bacterial filament) BSR55_19445 PF07963 Prokaryotic N-terminal methylation motif BSR55_19455 PF04536 TPM domain BSR55_19460 PF04011 LemA family BSR55_19465 PF02033 Ribosome-binding factor A BSR55_19470 PF00009 Elongation factor Tu GTP binding domain BSR55_19470 PF04760 Translation initiation factor IF-2, N-terminal region BSR55_19470 PF08364 Bacterial translation initiation factor IF-2 associated region BSR55_19470 PF11987 Translation-initiation factor 2 BSR55_19475 PF13184 NusA-like KH domain BSR55_19475 PF08529 NusA N-terminal domain BSR55_19475 PF00575 S1 RNA binding domain BSR55_19480 PF02576 RimP N-terminal domain BSR55_19480 PF17384 RimP C-terminal SH3 domain BSR55_19505 PF03840 Preprotein translocase SecG subunit BSR55_19510 PF00121 Triosephosphate isomerase BSR55_19515 PF00437 Type II/IV secretion system protein BSR55_19515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BSR55_19520 PF00482 Type II secretion system (T2SS), protein F BSR55_19525 PF06750 Bacterial Peptidase A24 N-terminal domain BSR55_19525 PF01478 Type IV leader peptidase family BSR55_19530 PF01121 Dephospho-CoA kinase BSR55_19540 PF00588 SpoU rRNA Methylase family BSR55_19540 PF08032 RNA 2'-O ribose methyltransferase substrate binding BSR55_19545 PF06865 Pyrimidine/purine nucleoside phosphorylase BSR55_19550 PF02463 RecF/RecN/SMC N terminal domain BSR55_19555 PF02622 Uncharacterized ACR, COG1678 BSR55_19560 PF03652 Holliday junction resolvase BSR55_19570 PF13533 Biotin-lipoyl like BSR55_19580 PF04632 Fusaric acid resistance protein family BSR55_19590 PF02525 Flavodoxin-like fold BSR55_19600 PF00005 ABC transporter BSR55_19600 PF00664 ABC transporter transmembrane region BSR55_19610 PF07670 Nucleoside recognition BSR55_19610 PF02421 Ferrous iron transport protein B BSR55_19610 PF07664 Ferrous iron transport protein B C terminus BSR55_19620 PF00589 Phage integrase family BSR55_19620 PF02899 Phage integrase, N-terminal SAM-like domain BSR55_19625 PF13098 Thioredoxin-like domain BSR55_19625 PF10411 Disulfide bond isomerase protein N-terminus BSR55_19630 PF01842 ACT domain BSR55_19630 PF00742 Homoserine dehydrogenase BSR55_19630 PF03447 Homoserine dehydrogenase, NAD binding domain BSR55_19635 PF00291 Pyridoxal-phosphate dependent enzyme BSR55_19640 PF00768 D-alanyl-D-alanine carboxypeptidase BSR55_19645 PF00196 Bacterial regulatory proteins, luxR family BSR55_19645 PF00072 Response regulator receiver domain BSR55_19650 PF00512 His Kinase A (phospho-acceptor) domain BSR55_19650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_19655 PF02954 Bacterial regulatory protein, Fis family BSR55_19655 PF00072 Response regulator receiver domain BSR55_19655 PF00158 Sigma-54 interaction domain BSR55_19660 PF03572 Peptidase family S41 BSR55_19660 PF00595 PDZ domain BSR55_19665 PF01676 Metalloenzyme superfamily BSR55_19665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BSR55_19670 PF03739 Lipopolysaccharide export system permease LptF/LptG BSR55_19675 PF03739 Lipopolysaccharide export system permease LptF/LptG BSR55_19680 PF02789 Cytosol aminopeptidase family, N-terminal domain BSR55_19680 PF00883 Cytosol aminopeptidase family, catalytic domain BSR55_19705 PF01066 CDP-alcohol phosphatidyltransferase BSR55_19715 PF02151 UvrB/uvrC motif BSR55_19715 PF01541 GIY-YIG catalytic domain BSR55_19715 PF08459 UvrC Helix-hairpin-helix N-terminal BSR55_19740 PF00378 Enoyl-CoA hydratase/isomerase BSR55_19740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSR55_19740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSR55_19745 PF02803 Thiolase, C-terminal domain BSR55_19745 PF00108 Thiolase, N-terminal domain BSR55_19770 PF00376 MerR family regulatory protein BSR55_19770 PF09278 MerR, DNA binding BSR55_19785 PF01323 DSBA-like thioredoxin domain BSR55_19800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_19800 PF00183 Hsp90 protein BSR55_19815 PF03553 Na+/H+ antiporter family BSR55_19815 PF13726 Na+-H+ antiporter family BSR55_19820 PF00561 alpha/beta hydrolase fold BSR55_19835 PF00324 Amino acid permease BSR55_19845 PF04997 RNA polymerase Rpb1, domain 1 BSR55_19845 PF00623 RNA polymerase Rpb1, domain 2 BSR55_19845 PF04983 RNA polymerase Rpb1, domain 3 BSR55_19845 PF05000 RNA polymerase Rpb1, domain 4 BSR55_19845 PF04998 RNA polymerase Rpb1, domain 5 BSR55_19850 PF04560 RNA polymerase Rpb2, domain 7 BSR55_19850 PF00562 RNA polymerase Rpb2, domain 6 BSR55_19850 PF10385 RNA polymerase beta subunit external 1 domain BSR55_19850 PF04565 RNA polymerase Rpb2, domain 3 BSR55_19850 PF04563 RNA polymerase beta subunit BSR55_19850 PF04561 RNA polymerase Rpb2, domain 2 BSR55_19855 PF16320 Ribosomal protein L7/L12 dimerisation domain BSR55_19855 PF00542 Ribosomal protein L7/L12 C-terminal domain BSR55_19860 PF00466 Ribosomal protein L10 BSR55_19865 PF00687 Ribosomal protein L1p/L10e family BSR55_19870 PF03946 Ribosomal protein L11, N-terminal domain BSR55_19870 PF00298 Ribosomal protein L11, RNA binding domain BSR55_19875 PF00467 KOW motif BSR55_19875 PF02357 Transcription termination factor nusG BSR55_19880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BSR55_19890 PF03144 Elongation factor Tu domain 2 BSR55_19890 PF03143 Elongation factor Tu C-terminal domain BSR55_19890 PF00009 Elongation factor Tu GTP binding domain BSR55_19915 PF00425 chorismate binding enzyme BSR55_19915 PF04715 Anthranilate synthase component I, N terminal region BSR55_19920 PF13419 Haloacid dehalogenase-like hydrolase BSR55_19925 PF16697 Inner membrane component of T3SS, cytoplasmic domain BSR55_19930 PF00263 Bacterial type II and III secretion system protein BSR55_19930 PF03958 Bacterial type II/III secretion system short domain BSR55_19945 PF00816 H-NS histone family BSR55_19970 PF03900 Porphobilinogen deaminase, C-terminal domain BSR55_19970 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BSR55_19975 PF00072 Response regulator receiver domain BSR55_19975 PF04397 LytTr DNA-binding domain BSR55_19980 PF06580 Histidine kinase BSR55_19980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_19985 PF14698 Argininosuccinate lyase C-terminal BSR55_19985 PF00206 Lyase BSR55_19990 PF04362 Bacterial Fe(2+) trafficking BSR55_20005 PF00230 Major intrinsic protein BSR55_20025 PF02705 K+ potassium transporter BSR55_20035 PF00589 Phage integrase family BSR55_20035 PF13356 Arm DNA-binding domain BSR55_20090 PF13333 Integrase core domain BSR55_20090 PF13276 HTH-like domain BSR55_20090 PF00665 Integrase core domain BSR55_20105 PF12102 Domain of unknown function (DUF3578) BSR55_20105 PF07728 AAA domain (dynein-related subfamily) BSR55_20115 PF08241 Methyltransferase domain BSR55_20155 PF01593 Flavin containing amine oxidoreductase BSR55_20160 PF02678 Pirin BSR55_20160 PF05726 Pirin C-terminal cupin domain BSR55_20165 PF00857 Isochorismatase family BSR55_20170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_20170 PF03466 LysR substrate binding domain BSR55_20175 PF00578 AhpC/TSA family BSR55_20175 PF10417 C-terminal domain of 1-Cys peroxiredoxin BSR55_20185 PF12833 Helix-turn-helix domain BSR55_20185 PF02311 AraC-like ligand binding domain BSR55_20190 PF00892 EamA-like transporter family BSR55_20195 PF00436 Single-strand binding protein family BSR55_20200 PF07690 Major Facilitator Superfamily BSR55_20210 PF08543 Phosphomethylpyrimidine kinase BSR55_20210 PF02581 Thiamine monophosphate synthase BSR55_20210 PF03070 TENA/THI-4/PQQC family BSR55_20220 PF07690 Major Facilitator Superfamily BSR55_20235 PF11798 IMS family HHH motif BSR55_20235 PF00817 impB/mucB/samB family BSR55_20235 PF11799 impB/mucB/samB family C-terminal domain BSR55_20240 PF00561 alpha/beta hydrolase fold BSR55_20260 PF05726 Pirin C-terminal cupin domain BSR55_20260 PF02678 Pirin BSR55_20285 PF17768 RecJ OB domain BSR55_20285 PF02272 DHHA1 domain BSR55_20285 PF01368 DHH family BSR55_20290 PF01243 Pyridoxamine 5'-phosphate oxidase BSR55_20290 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BSR55_20295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSR55_20295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSR55_20295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSR55_20295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSR55_20300 PF00571 CBS domain BSR55_20300 PF00478 IMP dehydrogenase / GMP reductase domain BSR55_20305 PF03692 Putative zinc- or iron-chelating domain BSR55_20310 PF01613 Flavin reductase like domain BSR55_20310 PF00258 Flavodoxin BSR55_20315 PF01169 Uncharacterized protein family UPF0016 BSR55_20320 PF02817 e3 binding domain BSR55_20320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSR55_20320 PF00364 Biotin-requiring enzyme BSR55_20325 PF00456 Transketolase, thiamine diphosphate binding domain BSR55_20325 PF17831 Pyruvate dehydrogenase E1 component middle domain BSR55_20340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BSR55_20345 PF00091 Tubulin/FtsZ family, GTPase domain BSR55_20345 PF12327 FtsZ family, C-terminal domain BSR55_20350 PF02491 SHS2 domain inserted in FTSA BSR55_20355 PF03799 Cell division protein FtsQ BSR55_20355 PF08478 POTRA domain, FtsQ-type BSR55_20360 PF01820 D-ala D-ala ligase N-terminus BSR55_20360 PF07478 D-ala D-ala ligase C-terminus BSR55_20365 PF08245 Mur ligase middle domain BSR55_20365 PF01225 Mur ligase family, catalytic domain BSR55_20365 PF02875 Mur ligase family, glutamate ligase domain BSR55_20370 PF04101 Glycosyltransferase family 28 C-terminal domain BSR55_20370 PF03033 Glycosyltransferase family 28 N-terminal domain BSR55_20375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BSR55_20375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BSR55_20385 PF01209 ubiE/COQ5 methyltransferase family BSR55_20390 PF04294 VanW like protein BSR55_20400 PF00156 Phosphoribosyl transferase domain BSR55_20405 PF03372 Endonuclease/Exonuclease/phosphatase family BSR55_20410 PF03960 ArsC family BSR55_20420 PF07859 alpha/beta hydrolase fold BSR55_20430 PF17158 Membrane-associated sensor, integral membrane domain BSR55_20430 PF00990 Diguanylate cyclase, GGDEF domain BSR55_20470 PF00005 ABC transporter BSR55_20475 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSR55_20475 PF00005 ABC transporter BSR55_20485 PF02653 Branched-chain amino acid transport system / permease component BSR55_20495 PF00204 DNA gyrase B BSR55_20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_20495 PF01751 Toprim domain BSR55_20495 PF00986 DNA gyrase B subunit, carboxyl terminus BSR55_20500 PF05728 Uncharacterised protein family (UPF0227) BSR55_20515 PF02600 Disulfide bond formation protein DsbB BSR55_20520 PF04262 Glutamate-cysteine ligase BSR55_20530 PF01872 RibD C-terminal domain BSR55_20540 PF04286 Protein of unknown function (DUF445) BSR55_20565 PF01717 Cobalamin-independent synthase, Catalytic domain BSR55_20565 PF08267 Cobalamin-independent synthase, N-terminal domain BSR55_20570 PF01613 Flavin reductase like domain BSR55_20625 PF00145 C-5 cytosine-specific DNA methylase BSR55_20635 PF00155 Aminotransferase class I and II BSR55_20640 PF01554 MatE BSR55_20650 PF00106 short chain dehydrogenase BSR55_20660 PF00072 Response regulator receiver domain BSR55_20660 PF00486 Transcriptional regulatory protein, C terminal BSR55_20665 PF11808 Phosphate regulon sensor protein PhoR BSR55_20665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSR55_20665 PF00512 His Kinase A (phospho-acceptor) domain BSR55_20665 PF00989 PAS fold BSR55_20675 PF02666 Phosphatidylserine decarboxylase BSR55_20680 PF00581 Rhodanese-like domain BSR55_20685 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BSR55_20685 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BSR55_20690 PF02580 D-Tyr-tRNA(Tyr) deacylase BSR55_20715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BSR55_20715 PF00925 GTP cyclohydrolase II BSR55_20720 PF00885 6,7-dimethyl-8-ribityllumazine synthase BSR55_20725 PF01029 NusB family BSR55_20730 PF02769 AIR synthase related protein, C-terminal domain BSR55_20730 PF00586 AIR synthase related protein, N-terminal domain BSR55_20735 PF04608 Phosphatidylglycerophosphatase A BSR55_20740 PF00132 Bacterial transferase hexapeptide (six repeats) BSR55_20740 PF12804 MobA-like NTP transferase domain BSR55_20740 PF14602 Hexapeptide repeat of succinyl-transferase BSR55_20745 PF01380 SIS domain BSR55_20750 PF01545 Cation efflux family BSR55_20755 PF01022 Bacterial regulatory protein, arsR family BSR55_20770 PF04463 Protein of unknown function (DUF523) BSR55_20775 PF01758 Sodium Bile acid symporter family BSR55_20780 PF00857 Isochorismatase family BSR55_20785 PF00701 Dihydrodipicolinate synthetase family BSR55_20795 PF01259 SAICAR synthetase BSR55_20810 PF00111 2Fe-2S iron-sulfur cluster binding domain BSR55_20820 PF07715 TonB-dependent Receptor Plug Domain BSR55_20820 PF00593 TonB dependent receptor BSR55_20835 PF00004 ATPase family associated with various cellular activities (AAA) BSR55_20835 PF16193 AAA C-terminal domain BSR55_20835 PF12002 MgsA AAA+ ATPase C terminal BSR55_20840 PF00756 Putative esterase BSR55_20845 PF03692 Putative zinc- or iron-chelating domain BSR55_20850 PF07043 Protein of unknown function (DUF1328) BSR55_20865 PF10576 Iron-sulfur binding domain of endonuclease III BSR55_20865 PF14815 NUDIX domain BSR55_20865 PF00633 Helix-hairpin-helix motif BSR55_20865 PF00730 HhH-GPD superfamily base excision DNA repair protein BSR55_20870 PF01551 Peptidase family M23 BSR55_20880 PF03352 Methyladenine glycosylase BSR55_20885 PF08240 Alcohol dehydrogenase GroES-like domain BSR55_20885 PF00107 Zinc-binding dehydrogenase BSR55_20900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSR55_20900 PF03466 LysR substrate binding domain BSR55_20905 PF00248 Aldo/keto reductase family BSR55_20910 PF07690 Major Facilitator Superfamily BSR55_20920 PF01113 Dihydrodipicolinate reductase, N-terminus BSR55_20920 PF05173 Dihydrodipicolinate reductase, C-terminus BSR55_20935 PF00684 DnaJ central domain BSR55_20935 PF01556 DnaJ C terminal domain BSR55_20935 PF00226 DnaJ domain BSR55_20945 PF00873 AcrB/AcrD/AcrF family BSR55_20950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSR55_20955 PF00440 Bacterial regulatory proteins, tetR family BSR55_20960 PF00311 Phosphoenolpyruvate carboxylase BSR55_20965 PF00860 Permease family BSR55_20980 PF01687 Riboflavin kinase BSR55_20980 PF06574 FAD synthetase BSR55_20985 PF08264 Anticodon-binding domain of tRNA BSR55_20985 PF00133 tRNA synthetases class I (I, L, M and V) BSR55_20985 PF06827 Zinc finger found in FPG and IleRS BSR55_20990 PF01252 Signal peptidase (SPase) II BSR55_20995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSR55_21015 PF01177 Asp/Glu/Hydantoin racemase BSR55_21030 PF00120 Glutamine synthetase, catalytic domain BSR55_21050 PF00920 Dehydratase family BSR55_21055 PF01389 OmpA-like transmembrane domain BSR55_21055 PF00691 OmpA family BSR55_21060 PF13018 Extended Signal Peptide of Type V secretion system BSR55_21060 PF03895 YadA-like membrane anchor domain BSR55_21060 PF05662 Coiled stalk of trimeric autotransporter adhesin BSR55_21060 PF05662 Coiled stalk of trimeric autotransporter adhesin BSR55_21060 PF13018 Extended Signal Peptide of Type V secretion system BSR55_21060 PF03895 YadA-like membrane anchor domain BSR55_21060 PF05658 Head domain of trimeric autotransporter adhesin BSR55_21060 PF05658 Head domain of trimeric autotransporter adhesin BSR55_21085 PF02911 Formyl transferase, C-terminal domain BSR55_21085 PF00551 Formyl transferase BSR55_21090 PF01189 16S rRNA methyltransferase RsmB/F BSR55_21090 PF01029 NusB family BSR55_21100 PF00209 Sodium:neurotransmitter symporter family BSR55_21105 PF06940 Domain of unknown function (DUF1287) BSR55_21110 PF00171 Aldehyde dehydrogenase family BSR55_21155 PF02872 5'-nucleotidase, C-terminal domain BSR55_21155 PF00149 Calcineurin-like phosphoesterase BSR55_21160 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BSR55_21165 PF00528 Binding-protein-dependent transport system inner membrane component BSR55_21170 PF00005 ABC transporter BSR55_21175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BSR55_21200 PF01025 GrpE BSR55_21205 PF00012 Hsp70 protein BSR55_21210 PF09278 MerR, DNA binding BSR55_21210 PF00376 MerR family regulatory protein BSR55_21245 PF13406 Transglycosylase SLT domain BSR55_21250 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BSR55_21250 PF02222 ATP-grasp domain BSR55_21255 PF00731 AIR carboxylase BSR55_21270 PF01225 Mur ligase family, catalytic domain BSR55_21270 PF08245 Mur ligase middle domain BSR55_21270 PF02875 Mur ligase family, glutamate ligase domain BSR55_21280 PF14542 GCN5-related N-acetyl-transferase BSR55_21285 PF14542 GCN5-related N-acetyl-transferase BSR55_21290 PF07690 Major Facilitator Superfamily BSR55_21300 PF03741 Integral membrane protein TerC family BSR55_21315 PF03738 Glutathionylspermidine synthase preATP-grasp BSR55_21325 PF01979 Amidohydrolase family BSR55_21330 PF00156 Phosphoribosyl transferase domain BSR55_21335 PF04226 Transglycosylase associated protein BSR55_21340 PF13098 Thioredoxin-like domain BSR55_21340 PF10411 Disulfide bond isomerase protein N-terminus BSR55_21345 PF01545 Cation efflux family BSR55_21350 PF02583 Metal-sensitive transcriptional repressor BSR55_21365 PF10396 GTP-binding protein TrmE N-terminus BSR55_21365 PF12631 MnmE helical domain BSR55_21365 PF01926 50S ribosome-binding GTPase BSR55_21370 PF14849 YidC periplasmic domain BSR55_21370 PF02096 60Kd inner membrane protein BSR55_21375 PF01809 Putative membrane protein insertion efficiency factor BSR55_21380 PF00825 Ribonuclease P BSR55_21385 PF00468 Ribosomal protein L34