locus-tag	class	description
ACBO_00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ACBO_00020	COG0592	DNA-directed DNA polymerase activity
ACBO_00040	COG0187	DNA topoisomerase II activity
ACBO_00060	COG0488	(ABC) transporter
ACBO_00170	COG0657	acetylesterase activity
ACBO_00190	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ACBO_00200	COG2814	Major facilitator Superfamily
ACBO_00220	COG0733	neurotransmitter:sodium symporter activity
ACBO_00240	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ACBO_00300	COG0129	dihydroxy-acid dehydratase activity
ACBO_00340	COG1477	protein flavinylation
ACBO_00360	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ACBO_00390	COG2233	PERMEase
ACBO_00410	COG1309	transcriptional regulator
ACBO_00420	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_00460	COG3307	-O-antigen
ACBO_00470	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ACBO_00510	COG1064	alcohol dehydrogenase
ACBO_00520	COG2818	Glycosylase
ACBO_00560	COG0537	adenosine 5'-monophosphoramidase activity
ACBO_00620	COG1596	polysaccharide export
ACBO_00630	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ACBO_00660	COG0438	transferase activity, transferring glycosyl groups
ACBO_00670	COG0438	transferase activity, transferring glycosyl groups
ACBO_00680	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ACBO_00700	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ACBO_00720	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ACBO_00750	COG1045	serine acetyltransferase
ACBO_00770	COG0438	transferase activity, transferring glycosyl groups
ACBO_00800	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ACBO_00810	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ACBO_00840	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ACBO_00850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ACBO_00860	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ACBO_00880	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ACBO_00890	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ACBO_00970	COG1454	alcohol dehydrogenase
ACBO_01020	COG0477	Major facilitator Superfamily
ACBO_01030	COG0271	Belongs to the BolA IbaG family
ACBO_01050	COG1192	Involved in chromosome partitioning
ACBO_01080	COG0586	Pfam SNARE associated Golgi protein
ACBO_01090	COG2259	Doxx family
ACBO_01100	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ACBO_01100	COG0519	Catalyzes the synthesis of GMP from XMP
ACBO_01130	COG3706	GGDEF domain
ACBO_01260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACBO_01270	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACBO_01280	COG1116	anion transmembrane transporter activity
ACBO_01300	COG0534	Mate efflux family protein
ACBO_01310	COG0436	Aminotransferase
ACBO_01360	COG2837	iron assimilation
ACBO_01390	COG2318	DinB family
ACBO_01400	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ACBO_01410	COG1121	(ABC) transporter
ACBO_01510	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ACBO_01580	COG0386	Belongs to the glutathione peroxidase family
ACBO_01600	COG0697	spore germination
ACBO_01620	COG0758	DNA mediated transformation
ACBO_01680	COG1309	transcriptional regulator
ACBO_01740	COG4452	Inner membrane protein CreD
ACBO_01750	COG2205	protein histidine kinase activity
ACBO_01760	COG0745	RESPONSE REGULATOR receiver
ACBO_01770	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ACBO_01800	COG2814	Major facilitator Superfamily
ACBO_01830	COG1253	flavin adenine dinucleotide binding
ACBO_01850	COG2860	membrane
ACBO_01860	COG0477	Major facilitator Superfamily
ACBO_01870	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ACBO_01880	COG0318	PFAM AMP-dependent synthetase and ligase
ACBO_01910	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ACBO_01950	COG0606	chelatase, subunit chli
ACBO_01970	COG0347	Belongs to the P(II) protein family
ACBO_01980	COG0004	ammonium transporteR
ACBO_02000	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ACBO_02000	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ACBO_02030	COG0586	Pfam SNARE associated Golgi protein
ACBO_02080	COG0795	lipopolysaccharide-transporting ATPase activity
ACBO_02090	COG0795	lipopolysaccharide-transporting ATPase activity
ACBO_02100	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ACBO_02110	COG0793	Belongs to the peptidase S41A family
ACBO_02140	COG2197	response regulator
ACBO_02150	COG1686	Belongs to the peptidase S11 family
ACBO_02160	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ACBO_02190	COG4974	Belongs to the 'phage' integrase family
ACBO_02240	COG0772	Belongs to the SEDS family
ACBO_02250	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ACBO_02260	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ACBO_02270	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ACBO_02280	COG0494	nUDIX hydrolase
ACBO_02290	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ACBO_02310	COG1538	Outer membrane efflux protein
ACBO_02330	COG1132	(ABC) transporter
ACBO_02390	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ACBO_02410	COG0497	DNA recombination
ACBO_02420	COG3123	guanosine phosphorylase activity
ACBO_02430	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ACBO_02450	COG0237	dephospho-CoA kinase activity
ACBO_02510	COG0779	Required for maturation of 30S ribosomal subunits
ACBO_02520	COG0195	Participates in both transcription termination and antitermination
ACBO_02530	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ACBO_02540	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ACBO_02560	COG1320	monovalent cation:proton antiporter activity
ACBO_02570	COG2212	antiporter activity
ACBO_02580	COG1863	multisubunit Na H antiporter MnhE subunit
ACBO_02590	COG0651	ATP synthesis coupled electron transport
ACBO_02600	COG1006	Multisubunit Na H antiporter MnhC subunit
ACBO_02610	COG2111	Na H antiporter
ACBO_02610	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ACBO_02640	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ACBO_02650	COG4221	oxidoreductase activity
ACBO_02660	COG2873	o-acetylhomoserine
ACBO_02670	COG0488	(ABC) transporter
ACBO_02730	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ACBO_02740	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ACBO_02790	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ACBO_02800	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ACBO_02810	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ACBO_02820	COG2226	methyltransferase
ACBO_02920	COG0070	glutamate synthase
ACBO_02920	COG0069	glutamate synthase activity
ACBO_02920	COG0067	glutamate synthase
ACBO_02930	COG0493	'glutamate synthase
ACBO_02950	COG1704	LemA family
ACBO_02960	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ACBO_03040	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ACBO_03050	COG1758	RNA polymerase activity
ACBO_03060	COG0194	GDP metabolic process
ACBO_03160	COG0228	four-way junction DNA binding
ACBO_03170	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ACBO_03210	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
ACBO_03220	COG5380	lipid catabolic process
ACBO_03230	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ACBO_03250	COG5006	permease, DMT superfamily
ACBO_03270	COG5006	permease, DMT superfamily
ACBO_03280	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ACBO_03290	COG0277	FAD linked oxidase domain protein
ACBO_03350	COG2814	Major facilitator Superfamily
ACBO_03370	COG1289	transmembrane transporter activity
ACBO_03380	COG2032	superoxide dismutase activity
ACBO_03390	COG0628	permease
ACBO_03400	COG1192	Involved in chromosome partitioning
ACBO_03430	COG2226	methyltransferase
ACBO_03470	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ACBO_03480	COG0254	rRNA binding
ACBO_03490	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ACBO_03510	COG0534	Mate efflux family protein
ACBO_03530	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ACBO_03550	COG1960	acyl-CoA dehydrogenase activity
ACBO_03590	COG0408	coproporphyrinogen oxidase activity
ACBO_03600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ACBO_03660	COG1127	ABC transporter
ACBO_03670	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ACBO_03710	COG0598	Magnesium transport protein CorA
ACBO_03740	COG1040	competence protein
ACBO_03750	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ACBO_03790	COG2937	Belongs to the GPAT DAPAT family
ACBO_03800	COG1946	Acyl-CoA thioesterase
ACBO_03820	COG1301	dicarboxylic acid transport
ACBO_03860	COG1959	2 iron, 2 sulfur cluster binding
ACBO_03880	COG0433	COG0433 Predicted ATPase
ACBO_03910	COG0051	transcription antitermination factor activity, RNA binding
ACBO_03960	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ACBO_04060	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ACBO_04070	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ACBO_04090	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ACBO_04160	COG0202	RNA polymerase activity
ACBO_04170	COG0203	ribosomal protein L17
ACBO_04180	COG2072	flavoprotein involved in K transport
ACBO_04210	COG1960	acyl-CoA dehydrogenase activity
ACBO_04220	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ACBO_04280	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ACBO_04290	COG0339	signal peptide processing
ACBO_04300	COG0557	exoribonuclease II activity
ACBO_04340	COG0179	Fumarylacetoacetate (FAA) hydrolase
ACBO_04380	COG1295	ribonuclease BN
ACBO_04500	COG1702	phosphate starvation-inducible protein PhoH
ACBO_04510	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ACBO_04520	COG1196	nuclear chromosome segregation
ACBO_04520	COG0741	lytic transglycosylase activity
ACBO_04520	COG0739	heme binding
ACBO_04590	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ACBO_04600	COG1183	phosphatidylcholine synthase activity
ACBO_04620	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ACBO_04680	COG1607	acyl-coa hydrolase
ACBO_04710	COG1666	GTP binding
ACBO_04750	COG2350	Protein conserved in bacteria
ACBO_04770	COG0613	PHP domain protein
ACBO_04780	COG3781	membrane
ACBO_04800	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ACBO_04820	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ACBO_05020	COG0640	Transcriptional regulator
ACBO_05040	COG0798	PFAM Bile acid sodium symporter
ACBO_05050	COG0431	NADPH-dependent FMN reductase
ACBO_05060	COG0492	ferredoxin-NADP+ reductase activity
ACBO_05070	COG2072	flavoprotein involved in K transport
ACBO_05090	COG2072	flavoprotein involved in K transport
ACBO_05140	COG2814	Major facilitator Superfamily
ACBO_05150	COG0697	spore germination
ACBO_05190	COG0004	ammonium transporteR
ACBO_05220	COG3622	Belongs to the hyi family
ACBO_05230	COG2084	Dehydrogenase
ACBO_05250	COG0784	Response regulator, receiver
ACBO_05250	COG2205	protein histidine kinase activity
ACBO_05250	COG5002	protein histidine kinase activity
ACBO_05290	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ACBO_05330	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ACBO_05350	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ACBO_05380	COG2986	histidine ammonia-lyase
ACBO_05460	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_05470	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ACBO_05490	COG0736	holo-[acyl-carrier-protein] synthase activity
ACBO_05520	COG1862	Preprotein translocase
ACBO_05530	COG0343	queuine tRNA-ribosyltransferase activity
ACBO_05550	COG1704	LemA family
ACBO_05570	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ACBO_05600	COG5002	protein histidine kinase activity
ACBO_05610	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ACBO_05650	COG0726	polysaccharide deacetylase
ACBO_05670	COG0438	transferase activity, transferring glycosyl groups
ACBO_05710	COG1088	dTDP-glucose 4,6-dehydratase activity
ACBO_05720	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ACBO_05750	COG1216	Glycosyl transferase, family 2
ACBO_05790	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ACBO_05850	COG3223	Belongs to the PsiE family
ACBO_05870	COG1960	acyl-CoA dehydrogenase activity
ACBO_05880	COG1960	acyl-CoA dehydrogenase activity
ACBO_05900	COG2205	protein histidine kinase activity
ACBO_05910	COG0745	RESPONSE REGULATOR receiver
ACBO_05930	COG1113	amino acid transport
ACBO_05980	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ACBO_06030	COG2096	Adenosyltransferase
ACBO_06040	COG4206	TonB-dependent receptor
ACBO_06050	COG4206	TonB-dependent receptor
ACBO_06160	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ACBO_06170	COG0285	dihydrofolate synthase activity
ACBO_06210	COG0450	alkyl hydroperoxide reductase
ACBO_06240	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ACBO_06250	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ACBO_06340	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ACBO_06350	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ACBO_06450	COG0494	nUDIX hydrolase
ACBO_06460	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ACBO_06470	COG1214	PFAM Peptidase M22, glycoprotease
ACBO_06480	COG1968	undecaprenyl-diphosphatase activity
ACBO_06520	COG0596	Alpha beta hydrolase
ACBO_06530	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ACBO_06540	COG4269	membrane
ACBO_06570	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ACBO_06590	COG2132	Multicopper oxidase
ACBO_06640	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ACBO_06670	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ACBO_06700	COG3121	Chaperone
ACBO_06710	COG3188	usher protein
ACBO_06750	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ACBO_06760	COG3545	Serine hydrolase
ACBO_06790	COG0730	response to heat
ACBO_06810	COG1196	nuclear chromosome segregation
ACBO_06830	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ACBO_06840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ACBO_06850	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
ACBO_06860	COG2193	ferroxidase activity
ACBO_06870	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ACBO_06900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ACBO_06900	COG2226	methyltransferase
ACBO_06900	COG0596	Alpha beta hydrolase
ACBO_06960	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ACBO_06970	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ACBO_07000	COG0009	L-threonylcarbamoyladenylate synthase
ACBO_07010	COG3101	peptidyl-lysine hydroxylation
ACBO_07020	COG1399	metal-binding, possibly nucleic acid-binding protein
ACBO_07030	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ACBO_07050	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_07070	COG1652	LysM domain
ACBO_07090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACBO_07110	COG0251	oxidation-reduction process
ACBO_07120	COG1113	amino acid transport
ACBO_07140	COG1981	membrane
ACBO_07220	COG0456	acetyltransferase
ACBO_07230	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ACBO_07240	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ACBO_07250	COG0492	ferredoxin-NADP+ reductase activity
ACBO_07260	COG1674	ftsk spoiiie
ACBO_07260	COG0531	amino acid
ACBO_07280	COG0583	DNA-binding transcription factor activity
ACBO_07350	COG0204	Acyl-transferase
ACBO_07370	COG0210	DNA helicase
ACBO_07400	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ACBO_07420	COG0121	glutamine amidotransferase
ACBO_07450	COG2914	Belongs to the UPF0125 (RnfH) family
ACBO_07460	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ACBO_07470	COG0735	belongs to the Fur family
ACBO_07540	COG0420	3'-5' exonuclease activity
ACBO_07560	COG5001	Diguanylate cyclase
ACBO_07560	COG4251	negative regulation of phosphorylation
ACBO_07560	COG3706	GGDEF domain
ACBO_07560	COG2203	Gaf domain
ACBO_07620	COG2050	protein possibly involved in aromatic compounds catabolism
ACBO_07630	COG1566	PFAM secretion protein HlyD family protein
ACBO_07640	COG2814	Major facilitator Superfamily
ACBO_07650	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ACBO_07770	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ACBO_07840	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ACBO_07860	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ACBO_07870	COG1077	Cell shape determining protein MreB Mrl
ACBO_07880	COG1792	Involved in formation and maintenance of cell shape
ACBO_07890	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ACBO_07900	COG0424	maF-like protein
ACBO_07910	COG1530	ribonuclease E activity
ACBO_07930	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ACBO_07980	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ACBO_07990	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ACBO_08000	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
ACBO_08010	COG2205	protein histidine kinase activity
ACBO_08020	COG0745	RESPONSE REGULATOR receiver
ACBO_08040	COG0582	viral genome integration into host DNA
ACBO_08050	COG1113	amino acid transport
ACBO_08060	COG2828	Protein conserved in bacteria
ACBO_08070	COG0142	geranyltranstransferase activity
ACBO_08080	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ACBO_08110	COG1752	Esterase of the alpha-beta hydrolase superfamily
ACBO_08160	COG0745	RESPONSE REGULATOR receiver
ACBO_08170	COG0642	Histidine kinase
ACBO_08200	COG0004	ammonium transporteR
ACBO_08210	COG1126	abc transporter atp-binding protein
ACBO_08220	COG0765	amino acid transport
ACBO_08230	COG0765	amino acid transport
ACBO_08270	COG2852	Protein conserved in bacteria
ACBO_08290	COG0525	valine-tRNA ligase activity
ACBO_08310	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_08330	COG0393	Putative heavy-metal-binding
ACBO_08340	COG0393	Putative heavy-metal-binding
ACBO_08350	COG1538	Outer membrane efflux protein
ACBO_08360	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACBO_08370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_08380	COG0671	phosphoesterase, PA-phosphatase related
ACBO_08460	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ACBO_08480	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ACBO_08490	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ACBO_08490	COG1648	precorrin-2 dehydrogenase activity
ACBO_08500	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ACBO_08520	COG0531	amino acid
ACBO_08550	COG0321	lipoyl(octanoyl) transferase activity
ACBO_08610	COG0586	Pfam SNARE associated Golgi protein
ACBO_08690	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ACBO_08750	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ACBO_08770	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ACBO_08800	COG0358	DNA primase activity
ACBO_08820	COG0564	pseudouridine synthase activity
ACBO_08850	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ACBO_08870	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ACBO_08910	COG0110	maltose O-acetyltransferase activity
ACBO_08940	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ACBO_08950	COG0505	Belongs to the CarA family
ACBO_08990	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ACBO_09000	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ACBO_09010	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ACBO_09060	COG2851	Citrate transporter
ACBO_09070	COG1253	flavin adenine dinucleotide binding
ACBO_09160	COG0739	heme binding
ACBO_09160	COG1196	nuclear chromosome segregation
ACBO_09160	COG0741	lytic transglycosylase activity
ACBO_09170	COG0037	tRNA processing
ACBO_09190	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ACBO_09200	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ACBO_09240	COG1741	Belongs to the pirin family
ACBO_09310	COG3706	GGDEF domain
ACBO_09340	COG0302	gtp cyclohydrolase
ACBO_09380	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ACBO_09390	COG0512	Glutamine amidotransferase of anthranilate synthase
ACBO_09400	COG0174	glutamine synthetase
ACBO_09420	COG3161	chorismate lyase activity
ACBO_09430	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ACBO_09450	COG0583	DNA-binding transcription factor activity
ACBO_09500	COG3733	amine oxidase
ACBO_09520	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ACBO_09540	COG0583	DNA-binding transcription factor activity
ACBO_09560	COG0625	glutathione transferase activity
ACBO_09680	COG0436	Aminotransferase
ACBO_09700	COG0052	Belongs to the universal ribosomal protein uS2 family
ACBO_09780	COG2951	lytic endotransglycosylase activity
ACBO_09810	COG0842	Transport permease protein
ACBO_09820	COG1131	(ABC) transporter
ACBO_09850	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ACBO_09850	COG0644	oxidoreductase
ACBO_09860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACBO_09870	COG1294	oxidase, subunit
ACBO_09880	COG1271	oxidase subunit
ACBO_09900	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACBO_09940	COG4774	siderophore transport
ACBO_09960	COG1414	Transcriptional regulator
ACBO_09970	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ACBO_09980	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ACBO_09990	COG0183	Belongs to the thiolase family
ACBO_10000	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ACBO_10010	COG0596	Alpha beta hydrolase
ACBO_10020	COG2271	Major facilitator Superfamily
ACBO_10030	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ACBO_10040	COG3485	protocatechuate 3,4-dioxygenase
ACBO_10050	COG3485	protocatechuate 3,4-dioxygenase
ACBO_10060	COG0710	3-dehydroquinate dehydratase activity
ACBO_10070	COG3420	alginic acid biosynthetic process
ACBO_10080	COG3659	wide pore channel activity
ACBO_10090	COG4993	Dehydrogenase
ACBO_10160	COG1968	undecaprenyl-diphosphatase activity
ACBO_10180	COG2175	clavaminate synthase activity
ACBO_10190	COG3246	L-lysine catabolic process to acetate
ACBO_10200	COG2814	Major facilitator Superfamily
ACBO_10220	COG2146	nitrite reductase [NAD(P)H] activity
ACBO_10230	COG2855	membrane
ACBO_10290	COG0318	PFAM AMP-dependent synthetase and ligase
ACBO_10310	COG0372	Belongs to the citrate synthase family
ACBO_10360	COG1113	amino acid transport
ACBO_10380	COG0010	Belongs to the arginase family
ACBO_10390	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ACBO_10460	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ACBO_10510	COG3634	alkyl hydroperoxide reductase activity
ACBO_10520	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ACBO_10530	COG0826	peptidase U32
ACBO_10540	COG0640	Transcriptional regulator
ACBO_10550	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ACBO_10560	COG0798	PFAM Bile acid sodium symporter
ACBO_10570	COG0431	NADPH-dependent FMN reductase
ACBO_10580	COG0789	Transcriptional regulator
ACBO_10650	COG4993	Dehydrogenase
ACBO_10670	COG1720	tRNA m6t6A37 methyltransferase activity
ACBO_10690	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ACBO_10740	COG0494	nUDIX hydrolase
ACBO_10760	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ACBO_10770	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ACBO_10780	COG3139	Protein of unknown function (DUF1315)
ACBO_10810	COG1301	dicarboxylic acid transport
ACBO_10820	COG1960	acyl-CoA dehydrogenase activity
ACBO_10830	COG0693	protein deglycase activity
ACBO_10850	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ACBO_10860	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ACBO_10920	COG2252	PERMEase
ACBO_10930	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ACBO_10950	COG3038	cytochrome b561
ACBO_10970	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ACBO_10990	COG0527	aspartate kinase activity
ACBO_11000	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ACBO_11020	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ACBO_11050	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ACBO_11060	COG1522	sequence-specific DNA binding
ACBO_11090	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ACBO_11130	COG1252	NADH dehydrogenase
ACBO_11140	COG1686	Belongs to the peptidase S11 family
ACBO_11230	COG0436	Aminotransferase
ACBO_11240	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ACBO_11250	COG0386	Belongs to the glutathione peroxidase family
ACBO_11270	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ACBO_11300	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ACBO_11360	COG0012	GTP binding
ACBO_11370	COG2011	ABC-type metal ion transport system permease component
ACBO_11380	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ACBO_11390	COG1464	Belongs to the NlpA lipoprotein family
ACBO_11400	COG1464	Belongs to the NlpA lipoprotein family
ACBO_11480	COG0204	Acyl-transferase
ACBO_11530	COG1538	Outer membrane efflux protein
ACBO_11590	COG4774	siderophore transport
ACBO_11620	COG2814	Major facilitator Superfamily
ACBO_11640	COG0179	Fumarylacetoacetate (FAA) hydrolase
ACBO_11660	COG1012	belongs to the aldehyde dehydrogenase family
ACBO_11670	COG3384	dioxygenase
ACBO_11690	COG3971	2-oxopent-4-enoate hydratase activity
ACBO_11730	COG0477	Major facilitator Superfamily
ACBO_11760	COG1960	acyl-CoA dehydrogenase activity
ACBO_11770	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACBO_11780	COG1053	succinate dehydrogenase
ACBO_11800	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_11830	COG2271	Major facilitator Superfamily
ACBO_11850	COG1846	Transcriptional regulator
ACBO_11860	COG2814	Major facilitator Superfamily
ACBO_11910	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ACBO_11910	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ACBO_11920	COG1254	Belongs to the acylphosphatase family
ACBO_11990	COG3634	alkyl hydroperoxide reductase activity
ACBO_12050	COG1643	Atp-dependent helicase
ACBO_12090	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ACBO_12100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ACBO_12110	COG0583	DNA-binding transcription factor activity
ACBO_12130	COG1765	OsmC-like protein
ACBO_12150	COG0667	Aldo Keto reductase
ACBO_12160	COG0542	response to heat
ACBO_12250	COG0540	Belongs to the ATCase OTCase family
ACBO_12270	COG2885	chlorophyll binding
ACBO_12270	COG3047	cAMP biosynthetic process
ACBO_12330	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ACBO_12340	COG4585	Histidine kinase
ACBO_12360	COG0659	secondary active sulfate transmembrane transporter activity
ACBO_12370	COG0625	glutathione transferase activity
ACBO_12380	COG2249	NAD(P)H dehydrogenase (quinone) activity
ACBO_12430	COG2363	Small membrane protein
ACBO_12460	COG1278	Cold shock
ACBO_12470	COG0513	Belongs to the DEAD box helicase family
ACBO_12540	COG0167	dihydroorotate dehydrogenase activity
ACBO_12640	COG1610	YqeY-like protein
ACBO_12690	COG0515	serine threonine protein kinase
ACBO_12690	COG2815	serine threonine protein kinase
ACBO_12730	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACBO_12740	COG1823	symporter activity
ACBO_12760	COG0612	Peptidase, M16
ACBO_12800	COG3025	triphosphatase activity
ACBO_12840	COG0352	thiamine-phosphate diphosphorylase activity
ACBO_12860	COG3193	protein, possibly involved in utilization of glycolate and propanediol
ACBO_12880	COG1309	transcriptional regulator
ACBO_12890	COG0783	Belongs to the Dps family
ACBO_13000	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ACBO_13060	COG0726	polysaccharide deacetylase
ACBO_13060	COG1649	PFAM Uncharacterised BCR, COG1649
ACBO_13070	COG1215	transferase activity, transferring glycosyl groups
ACBO_13110	COG2070	2-Nitropropane dioxygenase
ACBO_13150	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ACBO_13160	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ACBO_13230	COG1280	lysine exporter protein (LysE YggA)
ACBO_13240	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ACBO_13240	COG0519	Catalyzes the synthesis of GMP from XMP
ACBO_13290	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ACBO_13310	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ACBO_13320	COG1137	ATPase activity
ACBO_13380	COG0589	response to stress
ACBO_13390	COG4122	O-methyltransferase activity
ACBO_13410	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ACBO_13430	COG3706	GGDEF domain
ACBO_13510	COG2011	ABC-type metal ion transport system permease component
ACBO_13520	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ACBO_13530	COG1464	Belongs to the NlpA lipoprotein family
ACBO_13590	COG0138	bifunctional purine biosynthesis protein purh
ACBO_13600	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ACBO_13680	COG2814	Major facilitator Superfamily
ACBO_13710	COG3852	Histidine kinase
ACBO_13750	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ACBO_13760	COG0575	Belongs to the CDS family
ACBO_13790	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ACBO_13810	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACBO_13830	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACBO_13850	COG2137	regulation of response to DNA damage stimulus
ACBO_13870	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ACBO_13880	COG1011	Hydrolase
ACBO_13890	COG1218	3'(2'),5'-bisphosphate nucleotidase
ACBO_13940	COG0702	epimerase
ACBO_13950	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ACBO_13980	COG4585	Histidine kinase
ACBO_13990	COG2850	peptidyl-arginine hydroxylation
ACBO_14000	COG0424	maF-like protein
ACBO_14050	COG0697	spore germination
ACBO_14090	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACBO_14110	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ACBO_14120	COG3781	membrane
ACBO_14210	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ACBO_14220	COG1027	Aspartate ammonia-lyase
ACBO_14240	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ACBO_14300	COG0316	Belongs to the HesB IscA family
ACBO_14310	COG0822	iron-sulfur transferase activity
ACBO_14370	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ACBO_14450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ACBO_14500	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ACBO_14510	COG0569	domain protein
ACBO_14540	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ACBO_14550	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ACBO_14590	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ACBO_14600	COG0542	response to heat
ACBO_14660	COG0372	Belongs to the citrate synthase family
ACBO_14720	COG0415	Belongs to the DNA photolyase family
ACBO_14740	COG0281	malic enzyme
ACBO_14870	COG0789	Transcriptional regulator
ACBO_14910	COG1846	Transcriptional regulator
ACBO_14930	COG2814	Major facilitator Superfamily
ACBO_14950	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_14960	COG2814	Major facilitator Superfamily
ACBO_14970	COG2199	diguanylate cyclase activity
ACBO_14990	COG0439	Biotin carboxylase
ACBO_15120	COG0596	Alpha beta hydrolase
ACBO_15320	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_15330	COG2814	Major facilitator Superfamily
ACBO_15340	COG2271	Major facilitator Superfamily
ACBO_15350	COG2271	Major facilitator Superfamily
ACBO_15360	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACBO_15420	COG2267	carboxylic ester hydrolase activity
ACBO_15440	COG0596	Alpha beta hydrolase
ACBO_15460	COG0583	DNA-binding transcription factor activity
ACBO_15500	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ACBO_15540	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ACBO_15570	COG3971	2-oxopent-4-enoate hydratase activity
ACBO_15580	COG4569	acetaldehyde dehydrogenase (acetylating) activity
ACBO_15590	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ACBO_15610	COG1116	anion transmembrane transporter activity
ACBO_15610	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACBO_15640	COG2223	nitrite transmembrane transporter activity
ACBO_15650	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACBO_15660	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACBO_15670	COG0243	molybdopterin cofactor binding
ACBO_15690	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ACBO_15710	COG0314	molybdopterin synthase activity
ACBO_15720	COG0521	Mo-molybdopterin cofactor biosynthetic process
ACBO_15720	COG0315	cyclic pyranopterin monophosphate synthase activity
ACBO_15730	COG0303	'Molybdopterin
ACBO_15740	COG0725	ABC transporter, periplasmic molybdate-binding protein
ACBO_15750	COG4149	molybdate abc transporter
ACBO_15760	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ACBO_15770	COG0745	RESPONSE REGULATOR receiver
ACBO_15780	COG5002	protein histidine kinase activity
ACBO_15800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACBO_15810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_15830	COG0842	Transport permease protein
ACBO_15840	COG0842	Transport permease protein
ACBO_15850	COG1131	(ABC) transporter
ACBO_15880	COG1944	ATP diphosphatase activity
ACBO_15900	COG2937	Belongs to the GPAT DAPAT family
ACBO_15920	COG0318	PFAM AMP-dependent synthetase and ligase
ACBO_15970	COG2814	Major facilitator Superfamily
ACBO_15980	COG0583	DNA-binding transcription factor activity
ACBO_15990	COG4948	Mandelate Racemase Muconate Lactonizing
ACBO_16000	COG4829	muconolactone delta-isomerase
ACBO_16020	COG4638	Rieske (2fe-2S)
ACBO_16030	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ACBO_16040	COG0633	Ferredoxin
ACBO_16040	COG0543	2 iron, 2 sulfur cluster binding
ACBO_16050	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_16060	COG3135	benzoate transporter
ACBO_16070	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ACBO_16080	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ACBO_16090	COG0183	Belongs to the thiolase family
ACBO_16100	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ACBO_16130	COG2814	Major facilitator Superfamily
ACBO_16140	COG1960	acyl-CoA dehydrogenase activity
ACBO_16160	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ACBO_16210	COG1959	2 iron, 2 sulfur cluster binding
ACBO_16220	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ACBO_16240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ACBO_16260	COG0864	Transcriptional regulator
ACBO_16320	COG0439	Biotin carboxylase
ACBO_16350	COG0583	DNA-binding transcription factor activity
ACBO_16380	COG0427	acetyl-CoA hydrolase
ACBO_16390	COG0183	Belongs to the thiolase family
ACBO_16400	COG1960	acyl-CoA dehydrogenase activity
ACBO_16430	COG0789	Transcriptional regulator
ACBO_16450	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ACBO_16460	COG0640	Transcriptional regulator
ACBO_16500	COG3122	Protein conserved in bacteria
ACBO_16550	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACBO_16560	COG3135	benzoate transporter
ACBO_16590	COG2161	toxin-antitoxin pair type II binding
ACBO_16600	COG4115	mRNA cleavage
ACBO_16640	COG1132	(ABC) transporter
ACBO_16670	COG0509	glycine decarboxylation via glycine cleavage system
ACBO_16680	COG3384	dioxygenase
ACBO_16690	COG2814	Major facilitator Superfamily
ACBO_16720	COG0488	(ABC) transporter
ACBO_16750	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ACBO_16760	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ACBO_16770	COG2226	methyltransferase
ACBO_16800	COG0697	spore germination
ACBO_16840	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACBO_16840	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
ACBO_16880	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ACBO_16950	COG1525	nuclease
ACBO_16970	COG2814	Major facilitator Superfamily
ACBO_17020	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ACBO_17030	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ACBO_17090	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ACBO_17120	COG2819	hydrolase of the alpha beta superfamily
ACBO_17130	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ACBO_17180	COG0583	DNA-binding transcription factor activity
ACBO_17190	COG1380	Effector of murein hydrolase LrgA
ACBO_17200	COG1346	cytolysis
ACBO_17230	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ACBO_17330	COG1535	isochorismatase
ACBO_17330	COG3433	isochorismatase activity
ACBO_17340	COG1021	2,3-dihydroxybenzoate-AMP ligase
ACBO_17350	COG1169	isochorismate synthase
ACBO_17360	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_17370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ACBO_17390	COG2985	domain, Protein
ACBO_17410	COG4716	Myosin-crossreactive antigen
ACBO_17420	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ACBO_17450	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACBO_17460	COG2207	Transcriptional regulator
ACBO_17470	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ACBO_17490	COG0730	response to heat
ACBO_17640	COG1960	acyl-CoA dehydrogenase activity
ACBO_17650	COG1960	acyl-CoA dehydrogenase activity
ACBO_17720	COG0552	protein localization to endoplasmic reticulum
ACBO_17730	COG0612	Peptidase, M16
ACBO_17790	COG0516	GMP reductase activity
ACBO_17790	COG0517	IMP dehydrogenase activity
ACBO_17800	COG0133	tryptophan synthase activity
ACBO_17830	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ACBO_17870	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ACBO_17930	COG0537	adenosine 5'-monophosphoramidase activity
ACBO_17970	COG1294	oxidase, subunit
ACBO_18010	COG0772	Belongs to the SEDS family
ACBO_18040	COG0148	phosphopyruvate hydratase activity
ACBO_18080	COG0583	DNA-binding transcription factor activity
ACBO_18090	COG0656	L-ascorbic acid biosynthetic process
ACBO_18100	COG2814	Major facilitator Superfamily
ACBO_18130	COG0446	pyridine nucleotide-disulphide oxidoreductase
ACBO_18130	COG1902	pentaerythritol trinitrate reductase activity
ACBO_18150	COG0596	Alpha beta hydrolase
ACBO_18160	COG0583	DNA-binding transcription factor activity
ACBO_18170	COG0583	DNA-binding transcription factor activity
ACBO_18180	COG0024	Methionine aminopeptidase
ACBO_18190	COG1114	Component of the transport system for branched-chain amino acids
ACBO_18240	COG0786	glutamate:sodium symporter activity
ACBO_18340	COG1570	exodeoxyribonuclease VII activity
ACBO_18380	COG0729	surface antigen
ACBO_18400	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ACBO_18450	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ACBO_18470	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ACBO_18490	COG2814	Major facilitator Superfamily
ACBO_18500	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ACBO_18510	COG1960	acyl-CoA dehydrogenase activity
ACBO_18550	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACBO_18560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACBO_18570	COG2890	protein-(glutamine-N5) methyltransferase activity
ACBO_18610	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACBO_18620	COG4682	membrane
ACBO_18670	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ACBO_18680	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ACBO_18690	COG1845	cytochrome c oxidase, subunit III
ACBO_18700	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ACBO_18740	COG0360	Binds together with S18 to 16S ribosomal RNA
ACBO_18770	COG0305	Participates in initiation and elongation during chromosome replication
ACBO_18780	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ACBO_18800	COG1305	Transglutaminase-like
ACBO_18820	COG2308	Evidence 4 Homologs of previously reported genes of
ACBO_18840	COG0069	glutamate synthase activity
ACBO_18880	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ACBO_18890	COG1454	alcohol dehydrogenase
ACBO_18900	COG0824	Thioesterase
ACBO_18910	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ACBO_18940	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ACBO_18950	COG2030	dehydratase
ACBO_18970	COG0183	Belongs to the thiolase family
ACBO_19000	COG0583	DNA-binding transcription factor activity
ACBO_19010	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ACBO_19030	COG3135	benzoate transporter
ACBO_19040	COG1309	transcriptional regulator
ACBO_19070	COG0589	response to stress
ACBO_19090	COG1714	RDD family
ACBO_19110	COG0308	aminopeptidase N
ACBO_19160	COG1253	flavin adenine dinucleotide binding
ACBO_19200	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ACBO_19210	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ACBO_19240	COG2431	L-lysine efflux transmembrane transporter activity
ACBO_19280	COG0776	regulation of translation
ACBO_19330	COG1024	Enoyl-CoA hydratase
ACBO_19340	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ACBO_19410	COG0084	hydrolase, TatD family'
ACBO_19450	COG1663	tetraacyldisaccharide 4'-kinase activity
ACBO_19460	COG1132	(ABC) transporter
ACBO_19480	COG0811	peptide transport
ACBO_19490	COG1475	DNA binding
ACBO_19500	COG1192	Involved in chromosome partitioning
ACBO_19520	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ACBO_19550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ACBO_19560	COG1923	regulation of RNA biosynthetic process
ACBO_19580	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ACBO_19590	COG0802	atpase or kinase
ACBO_19600	COG0564	pseudouridine synthase activity
ACBO_19640	COG2707	UPF0756 membrane protein
ACBO_19650	COG0730	response to heat
ACBO_19660	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACBO_19720	COG0714	Associated with various cellular activities
ACBO_19730	COG2879	small protein
ACBO_19740	COG1966	Carbon starvation protein
ACBO_19830	COG1067	ATP-dependent peptidase activity
ACBO_19840	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ACBO_19850	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ACBO_19860	COG0583	DNA-binding transcription factor activity
ACBO_19870	COG4942	peptidase
ACBO_19910	COG1686	Belongs to the peptidase S11 family
ACBO_19920	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ACBO_19950	COG0482	sulfurtransferase activity
ACBO_19960	COG2915	High frequency lysogenization protein hflD homolog
ACBO_20030	COG0616	signal peptide processing
ACBO_20040	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ACBO_20060	COG0573	inorganic phosphate transmembrane transporter activity
ACBO_20070	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ACBO_20090	COG2271	Major facilitator Superfamily
ACBO_20100	COG0076	glutamate decarboxylase activity
ACBO_20110	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ACBO_20130	COG4772	TonB-dependent receptor
ACBO_20140	COG0671	phosphoesterase, PA-phosphatase related
ACBO_20170	COG1733	regulation of RNA biosynthetic process
ACBO_20180	COG0702	epimerase
ACBO_20240	COG0556	nucleotide-excision repair
ACBO_20260	COG3706	GGDEF domain
ACBO_20310	COG2175	clavaminate synthase activity
ACBO_20360	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ACBO_20370	COG1960	acyl-CoA dehydrogenase activity
ACBO_20400	COG2233	PERMEase
ACBO_20410	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACBO_20420	COG0251	oxidation-reduction process
ACBO_20430	COG1335	isochorismatase
ACBO_20440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACBO_20450	COG0596	Alpha beta hydrolase
ACBO_20470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ACBO_20480	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ACBO_20490	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ACBO_20540	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ACBO_20570	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ACBO_20580	COG0571	ribonuclease III activity
ACBO_20600	COG0681	Belongs to the peptidase S26 family
ACBO_20630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ACBO_20690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ACBO_20710	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ACBO_20720	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ACBO_20750	COG4208	sulfate ABC transporter
ACBO_20760	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ACBO_20770	COG0583	DNA-binding transcription factor activity
ACBO_20810	COG0602	queuosine metabolic process
ACBO_20820	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ACBO_20850	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ACBO_20870	COG0583	DNA-binding transcription factor activity
ACBO_20880	COG2353	YceI-like domain
ACBO_20890	COG1051	belongs to the nudix hydrolase family
ACBO_20890	COG1056	cytidyltransferase-related domain
ACBO_20900	COG1024	Enoyl-CoA hydratase
ACBO_20910	COG0778	Nitroreductase
ACBO_20920	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ACBO_20920	COG3323	Protein of unknown function (DUF1653)
ACBO_20940	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ACBO_20940	COG0047	phosphoribosylformylglycinamidine synthase activity
ACBO_20990	COG2255	four-way junction helicase activity
ACBO_21020	COG1473	amidohydrolase
ACBO_21030	COG0824	Thioesterase
ACBO_21080	COG0823	Involved in the tonB-independent uptake of proteins
ACBO_21120	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ACBO_21190	COG0628	permease
ACBO_21200	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ACBO_21210	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ACBO_21260	COG0658	competence protein
ACBO_21260	COG2333	competence protein COMEC
ACBO_21280	COG1136	(ABC) transporter
ACBO_21310	COG0697	spore germination
ACBO_21320	COG1671	Belongs to the UPF0178 family
ACBO_21380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_21410	COG1301	dicarboxylic acid transport
ACBO_21480	COG1280	lysine exporter protein (LysE YggA)
ACBO_21490	COG1522	sequence-specific DNA binding
ACBO_21540	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ACBO_21570	COG0019	diaminopimelate decarboxylase activity
ACBO_21590	COG1113	amino acid transport
ACBO_21620	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ACBO_21650	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ACBO_21670	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ACBO_21680	COG3300	MHYT domain
ACBO_21680	COG5001	Diguanylate cyclase
ACBO_21710	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ACBO_21820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ACBO_21830	COG0842	Transport permease protein
ACBO_21840	COG1129	ABC transporter
ACBO_21840	COG0842	Transport permease protein
ACBO_21850	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_21900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ACBO_21920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_21960	COG3712	iron ion homeostasis
ACBO_21980	COG1902	pentaerythritol trinitrate reductase activity
ACBO_21980	COG0446	pyridine nucleotide-disulphide oxidoreductase
ACBO_21990	COG0277	FAD linked oxidase domain protein
ACBO_22010	COG2186	Transcriptional regulator
ACBO_22040	COG0697	spore germination
ACBO_22050	COG0583	DNA-binding transcription factor activity
ACBO_22070	COG3706	GGDEF domain
ACBO_22080	COG0418	dihydroorotase activity
ACBO_22090	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ACBO_22100	COG4771	TonB-dependent receptor
ACBO_22110	COG0833	amino acid
ACBO_22120	COG0833	amino acid
ACBO_22140	COG0625	glutathione transferase activity
ACBO_22160	COG4172	Belongs to the ABC transporter superfamily
ACBO_22170	COG4239	(ABC) transporter, permease
ACBO_22180	COG4174	ABC transporter (Permease)
ACBO_22200	COG0741	lytic transglycosylase activity
ACBO_22200	COG1388	LysM domain
ACBO_22230	COG2816	NAD+ diphosphatase activity
ACBO_22240	COG0657	acetylesterase activity
ACBO_22310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACBO_22320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ACBO_22330	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ACBO_22330	COG0456	acetyltransferase
ACBO_22340	COG0006	proline dipeptidase activity
ACBO_22410	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ACBO_22440	COG2234	aminopeptidase activity
ACBO_22460	COG3384	dioxygenase
ACBO_22480	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ACBO_22490	COG2878	Part of a membrane complex involved in electron transport
ACBO_22500	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ACBO_22550	COG0768	penicillin binding
ACBO_22560	COG0742	ribosomal rna small subunit methyltransferase
ACBO_22620	COG3015	lipoprotein NlpE involved in copper resistance
ACBO_22680	COG1597	lipid kinase activity
ACBO_22690	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
ACBO_22720	COG0477	Major facilitator Superfamily
ACBO_22730	COG0477	Major facilitator Superfamily
ACBO_22760	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ACBO_22850	COG1695	Transcriptional regulator
ACBO_22920	COG1585	Membrane protein implicated in regulation of membrane protease activity
ACBO_22930	COG2268	Band 7 protein
ACBO_22940	COG1649	PFAM Uncharacterised BCR, COG1649
ACBO_22940	COG0726	polysaccharide deacetylase
ACBO_22960	COG1215	transferase activity, transferring glycosyl groups
ACBO_22970	COG1649	PFAM Uncharacterised BCR, COG1649
ACBO_22970	COG0726	polysaccharide deacetylase
ACBO_22990	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ACBO_23010	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ACBO_23040	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ACBO_23050	COG1053	succinate dehydrogenase
ACBO_23060	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ACBO_23070	COG2009	succinate dehydrogenase
ACBO_23090	COG2072	flavoprotein involved in K transport
ACBO_23100	COG0300	oxidoreductase activity
ACBO_23120	COG2425	protein containing a von Willebrand factor type A (vWA) domain
ACBO_23130	COG0714	Associated with various cellular activities
ACBO_23220	COG2321	neutral zinc metallopeptidase
ACBO_23230	COG2354	Protein conserved in bacteria
ACBO_23290	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ACBO_23300	COG1773	rubredoxin
ACBO_23310	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACBO_23330	COG0583	DNA-binding transcription factor activity
ACBO_23380	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ACBO_23390	COG4181	ATPase activity
ACBO_23440	COG4771	TonB-dependent receptor
ACBO_23500	COG0306	phosphate transporter
ACBO_23570	COG2223	nitrite transmembrane transporter activity
ACBO_23580	COG2207	Transcriptional regulator
ACBO_23590	COG0242	peptide deformylase activity
ACBO_23620	COG0477	Major facilitator Superfamily
ACBO_23700	COG2203	Gaf domain
ACBO_23700	COG2199	diguanylate cyclase activity
ACBO_23730	COG4681	YaeQ
ACBO_23750	COG0523	cobalamin synthesis protein
ACBO_23790	COG0583	DNA-binding transcription factor activity
ACBO_23800	COG2814	Major facilitator Superfamily
ACBO_23820	COG1607	acyl-coa hydrolase
ACBO_23840	COG1752	Esterase of the alpha-beta hydrolase superfamily
ACBO_23860	COG0786	glutamate:sodium symporter activity
ACBO_23890	COG2814	Major facilitator Superfamily
ACBO_23900	COG1289	transmembrane transporter activity
ACBO_23920	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ACBO_24010	COG0643	Histidine kinase
ACBO_24010	COG2198	Histidine kinase
ACBO_24020	COG0840	transmembrane signaling receptor activity
ACBO_24070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_24090	COG0442	prolyl-tRNA aminoacylation
ACBO_24160	COG0489	protein tyrosine kinase activity
ACBO_24210	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACBO_24210	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACBO_24240	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ACBO_24310	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ACBO_24320	COG2081	HI0933 family
ACBO_24350	COG0668	transmembrane transport
ACBO_24370	COG4302	ethanolamine ammonia-lyase activity
ACBO_24390	COG0531	amino acid
ACBO_24420	COG0583	DNA-binding transcription factor activity
ACBO_24430	COG1278	Cold shock
ACBO_24470	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ACBO_24480	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ACBO_24490	COG0713	ATP synthesis coupled electron transport
ACBO_24510	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ACBO_24540	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ACBO_24600	COG2205	protein histidine kinase activity
ACBO_24610	COG0745	RESPONSE REGULATOR receiver
ACBO_24640	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ACBO_24650	COG5290	Psort location Cytoplasmic, score
ACBO_24670	COG2963	transposase activity
ACBO_24730	COG0351	phosphomethylpyrimidine kinase
ACBO_24730	COG0352	thiamine-phosphate diphosphorylase activity
ACBO_24730	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ACBO_24740	COG5342	invasion associated locus B
ACBO_24750	COG0494	nUDIX hydrolase
ACBO_24780	COG3422	double-strand break repair
ACBO_24800	COG2824	Alkylphosphonate utilization operon protein PhnA
ACBO_24810	COG3189	MarR family transcriptional regulator
ACBO_24850	COG0564	pseudouridine synthase activity
ACBO_24950	COG0354	folic acid binding
ACBO_24960	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ACBO_25020	COG1902	pentaerythritol trinitrate reductase activity
ACBO_25030	COG4772	TonB-dependent receptor
ACBO_25060	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ACBO_25090	COG1217	gtp-binding protein TYPA
ACBO_25100	COG2233	PERMEase
ACBO_25120	COG0833	amino acid
ACBO_25160	COG0183	Belongs to the thiolase family
ACBO_25190	COG3384	dioxygenase
ACBO_25220	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ACBO_25250	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ACBO_25260	COG2207	Transcriptional regulator
ACBO_25280	COG0183	Belongs to the thiolase family
ACBO_25290	COG1024	Enoyl-CoA hydratase
ACBO_25290	COG1250	3-hydroxyacyl-CoA dehydrogenase
ACBO_25300	COG1522	sequence-specific DNA binding
ACBO_25360	COG1272	protein, Hemolysin III
ACBO_25370	COG0477	Major facilitator Superfamily
ACBO_25390	COG1408	metallophosphoesterase
ACBO_25400	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ACBO_25420	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ACBO_25480	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ACBO_25490	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ACBO_25500	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ACBO_25510	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ACBO_25520	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ACBO_25530	COG0625	glutathione transferase activity
ACBO_25540	COG2969	positive regulation of protein catabolic process
ACBO_25600	COG2853	Lipoprotein
ACBO_25630	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ACBO_25650	COG1764	response to oxidative stress
ACBO_25750	COG0037	tRNA processing
ACBO_25770	COG0248	Ppx GppA phosphatase
ACBO_25820	COG0072	phenylalanine-tRNA ligase activity
ACBO_25890	COG3210	domain, Protein
ACBO_25940	COG1238	metal cluster binding
ACBO_25970	COG0625	glutathione transferase activity
ACBO_26000	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ACBO_26020	COG0318	PFAM AMP-dependent synthetase and ligase
ACBO_26040	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ACBO_26050	COG1660	Displays ATPase and GTPase activities
ACBO_26080	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ACBO_26090	COG0617	tRNA 3'-terminal CCA addition
ACBO_26100	COG1555	photosystem II stabilization
ACBO_26110	COG3956	TIGRFAM MazG family protein
ACBO_26120	COG0300	oxidoreductase activity
ACBO_26140	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ACBO_26300	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ACBO_26310	COG0440	acetolactate synthase activity
ACBO_26320	COG0028	Belongs to the TPP enzyme family
ACBO_26370	COG2703	oxygen carrier activity
ACBO_26380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ACBO_26390	COG1136	(ABC) transporter
ACBO_26390	COG0577	efflux transmembrane transporter activity
ACBO_26400	COG1538	Outer membrane efflux protein
ACBO_26420	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ACBO_26430	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ACBO_26440	COG1162	GTPase activity
ACBO_26490	COG0084	hydrolase, TatD family'
ACBO_26520	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ACBO_26550	COG0793	Belongs to the peptidase S41A family
ACBO_26580	COG2267	carboxylic ester hydrolase activity
ACBO_26600	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ACBO_26610	COG0857	belongs to the CobB CobQ family
ACBO_26610	COG0280	phosphate acetyltransferase
ACBO_26620	COG1280	lysine exporter protein (LysE YggA)
ACBO_26650	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ACBO_26650	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ACBO_26690	COG0740	serine-type endopeptidase activity
ACBO_26710	COG4774	siderophore transport
ACBO_26720	COG4774	siderophore transport
ACBO_26730	COG3128	pkhd-type hydroxylase
ACBO_26750	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ACBO_26770	COG2813	Specifically methylates the guanine in position
ACBO_26770	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ACBO_27010	COG0788	formyltetrahydrofolate deformylase activity
ACBO_27060	COG4651	solute:proton antiporter activity
ACBO_27060	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ACBO_27110	COG0724	RNA recognition motif
ACBO_27120	COG0210	DNA helicase
ACBO_27130	COG1929	Belongs to the glycerate kinase type-1 family
ACBO_27210	COG2900	Belongs to the SlyX family
ACBO_27220	COG0488	(ABC) transporter
ACBO_27230	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_27240	COG1560	Kdo2-lipid A biosynthetic process
ACBO_27310	COG0252	asparaginase activity
ACBO_27370	COG0473	3-isopropylmalate dehydrogenase activity
ACBO_27400	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ACBO_27440	COG0583	DNA-binding transcription factor activity
ACBO_27480	COG0494	nUDIX hydrolase
ACBO_27530	COG0583	DNA-binding transcription factor activity
ACBO_27540	COG1960	acyl-CoA dehydrogenase activity
ACBO_27570	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
ACBO_27640	COG0446	pyridine nucleotide-disulphide oxidoreductase
ACBO_27650	COG3384	dioxygenase
ACBO_27660	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_27690	COG4638	Rieske (2fe-2S)
ACBO_27700	COG0583	DNA-binding transcription factor activity
ACBO_27750	COG4569	acetaldehyde dehydrogenase (acetylating) activity
ACBO_27760	COG3971	2-oxopent-4-enoate hydratase activity
ACBO_27770	COG0546	phosphoglycolate phosphatase activity
ACBO_27790	COG1530	ribonuclease E activity
ACBO_27800	COG0318	PFAM AMP-dependent synthetase and ligase
ACBO_27820	COG1983	PspC domain protein
ACBO_27830	COG0517	IMP dehydrogenase activity
ACBO_27850	COG0752	glycyl-tRNA synthetase alpha subunit
ACBO_27860	COG0751	glycine-tRNA ligase activity
ACBO_27910	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ACBO_27970	COG0493	'glutamate synthase
ACBO_27990	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ACBO_28000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ACBO_28030	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ACBO_28050	COG0644	oxidoreductase
ACBO_28050	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ACBO_28060	COG0425	Belongs to the sulfur carrier protein TusA family
ACBO_28070	COG4535	Mg2 and Co2 transporter CorC
ACBO_28080	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ACBO_28090	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ACBO_28130	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ACBO_28150	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ACBO_28190	COG0484	heat shock protein binding
ACBO_28200	COG0789	Transcriptional regulator
ACBO_28210	COG2841	Protein conserved in bacteria
ACBO_28220	COG0598	Magnesium transport protein CorA
ACBO_28230	COG1185	polyribonucleotide nucleotidyltransferase activity
ACBO_28250	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ACBO_28260	COG1074	ATP-dependent DNA helicase activity
ACBO_28270	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ACBO_28330	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ACBO_28410	COG0427	acetyl-CoA hydrolase
ACBO_28420	COG0456	acetyltransferase
ACBO_28430	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ACBO_28500	COG0326	Molecular chaperone. Has ATPase activity
ACBO_28530	COG2056	Na+-H+ antiporter family
ACBO_28580	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ACBO_28590	COG0085	RNA polymerase activity
ACBO_28600	COG0222	ribosome binding
ACBO_28610	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ACBO_28620	COG0081	regulation of translation
ACBO_28650	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ACBO_28680	COG0546	phosphoglycolate phosphatase activity
ACBO_28780	COG0181	hydroxymethylbilane synthase activity
ACBO_28800	COG3275	phosphorelay sensor kinase activity
ACBO_28830	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ACBO_28990	COG0131	Imidazoleglycerol-phosphate dehydratase
ACBO_29000	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ACBO_29060	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ACBO_29060	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ACBO_29070	COG0531	amino acid
ACBO_29100	COG1278	Cold shock
ACBO_29110	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ACBO_29210	COG3158	transport of potassium into the cell
ACBO_29220	COG0582	viral genome integration into host DNA
ACBO_29300	COG1335	isochorismatase
ACBO_29310	COG0583	DNA-binding transcription factor activity
ACBO_29360	COG0629	single-stranded DNA binding
ACBO_29370	COG2814	Major facilitator Superfamily
ACBO_29420	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ACBO_29440	COG3706	GGDEF domain
ACBO_29470	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ACBO_29480	COG3162	membrane
ACBO_29490	COG0784	Response regulator, receiver
ACBO_29490	COG2205	protein histidine kinase activity
ACBO_29550	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_29570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ACBO_29590	COG0668	transmembrane transport
ACBO_29600	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ACBO_29610	COG1519	Transferase
ACBO_29620	COG1902	pentaerythritol trinitrate reductase activity
ACBO_29680	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ACBO_29730	COG0426	domain, Protein
ACBO_29730	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ACBO_29740	COG2119	membrane
ACBO_29800	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ACBO_29820	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ACBO_29830	COG1181	Belongs to the D-alanine--D-alanine ligase family
ACBO_29840	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ACBO_29860	COG0189	ligase activity
ACBO_29890	COG0753	catalase activity
ACBO_29950	COG0708	Exodeoxyribonuclease III
ACBO_29960	COG1393	Belongs to the ArsC family
ACBO_29990	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ACBO_30000	COG3706	GGDEF domain
ACBO_30010	COG0625	glutathione transferase activity
ACBO_30070	COG1247	-acetyltransferase
ACBO_30120	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ACBO_30130	COG2918	glutathione biosynthetic process
ACBO_30160	COG2733	membrane
ACBO_30250	COG0753	catalase activity
ACBO_30290	COG0560	Phosphoserine phosphatase
ACBO_30290	COG3830	Belongs to the UPF0237 family
ACBO_30320	COG0385	Bile acid
ACBO_30330	COG1335	isochorismatase
ACBO_30340	COG2814	Major facilitator Superfamily
ACBO_30350	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ACBO_30380	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ACBO_30390	COG5001	Diguanylate cyclase
ACBO_30390	COG3300	MHYT domain
ACBO_30400	COG1683	Conserved Protein
ACBO_30410	COG2983	Belongs to the UPF0260 family
ACBO_30420	COG5487	UPF0391 membrane protein
ACBO_30440	COG3023	N-Acetylmuramoyl-L-alanine amidase
ACBO_30470	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ACBO_30480	COG1309	transcriptional regulator
ACBO_30510	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ACBO_30520	COG0546	phosphoglycolate phosphatase activity
ACBO_30530	COG1028	Short-chain dehydrogenase reductase Sdr
ACBO_30570	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ACBO_30570	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ACBO_30580	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACBO_30590	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ACBO_30600	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ACBO_30610	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ACBO_30620	COG1116	anion transmembrane transporter activity
ACBO_30630	COG1309	transcriptional regulator
ACBO_30670	COG0196	riboflavin kinase activity
ACBO_30680	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ACBO_30700	COG1047	Peptidyl-prolyl cis-trans
ACBO_30710	COG0431	NADPH-dependent FMN reductase
ACBO_30750	COG2814	Major facilitator Superfamily
ACBO_30770	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ACBO_30780	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ACBO_30790	COG2951	lytic endotransglycosylase activity
ACBO_30800	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ACBO_30830	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ACBO_30860	COG2388	GCN5-related N-acetyl-transferase
ACBO_30870	COG2814	Major facilitator Superfamily
ACBO_30880	COG0861	Integral membrane protein TerC family
ACBO_30900	COG0402	S-adenosylhomocysteine deaminase activity
ACBO_30940	COG1230	cation diffusion facilitator family transporter
ACBO_30980	COG0706	membrane insertase activity
ACBO_30990	COG0759	Could be involved in insertion of integral membrane proteins into the membrane