locus-tag	class	description
LRO84_00010	COG0592	DNA-directed DNA polymerase activity
LRO84_00020	COG0187	DNA topoisomerase II activity
LRO84_00035	COG0488	(ABC) transporter
LRO84_00060	COG0596	Alpha beta hydrolase
LRO84_00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LRO84_00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LRO84_00115	COG0733	neurotransmitter:sodium symporter activity
LRO84_00125	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LRO84_00155	COG2233	PERMEase
LRO84_00170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_00205	COG2814	Major facilitator Superfamily
LRO84_00210	COG0656	L-ascorbic acid biosynthetic process
LRO84_00215	COG0583	DNA-binding transcription factor activity
LRO84_00230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LRO84_00235	COG1064	alcohol dehydrogenase
LRO84_00240	COG2818	Glycosylase
LRO84_00255	COG1194	a g-specific adenine glycosylase
LRO84_00275	COG2983	Belongs to the UPF0260 family
LRO84_00280	COG2133	pyrroloquinoline quinone binding
LRO84_00285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LRO84_00290	COG2116	formate transmembrane transporter activity
LRO84_00310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LRO84_00315	COG1335	isochorismatase
LRO84_00320	COG0385	Bile acid
LRO84_00325	COG0534	Mate efflux family protein
LRO84_00330	COG1683	Conserved Protein
LRO84_00345	COG0346	lactoylglutathione lyase activity
LRO84_00350	COG0625	glutathione transferase activity
LRO84_00360	COG1113	amino acid transport
LRO84_00370	COG0523	cobalamin synthesis protein
LRO84_00380	COG2188	Transcriptional regulator
LRO84_00410	COG0010	Belongs to the arginase family
LRO84_00430	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LRO84_00440	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LRO84_00445	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LRO84_00550	COG0534	Mate efflux family protein
LRO84_00555	COG0436	Aminotransferase
LRO84_00560	COG2733	membrane
LRO84_00575	COG2918	glutathione biosynthetic process
LRO84_00595	COG1705	Flagellar rod assembly protein muramidase FlgJ
LRO84_00595	COG3951	Flagellar rod assembly protein muramidase FlgJ
LRO84_00610	COG3150	esterase
LRO84_00620	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
LRO84_00630	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LRO84_00640	COG2233	PERMEase
LRO84_00645	COG2351	hydroxyisourate hydrolase activity
LRO84_00680	COG3706	GGDEF domain
LRO84_00695	COG1393	Belongs to the ArsC family
LRO84_00700	COG0708	Exodeoxyribonuclease III
LRO84_00725	COG0189	ligase activity
LRO84_00745	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LRO84_00755	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LRO84_00770	COG4942	peptidase
LRO84_00780	COG0508	dehydrogenase complex catalyzes the overall conversion of
LRO84_00790	COG2119	membrane
LRO84_00795	COG4774	siderophore transport
LRO84_00800	COG0426	domain, Protein
LRO84_00800	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LRO84_00820	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LRO84_00845	COG1902	pentaerythritol trinitrate reductase activity
LRO84_00850	COG1519	Transferase
LRO84_00855	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LRO84_00860	COG0668	transmembrane transport
LRO84_00870	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LRO84_00875	COG1335	isochorismatase
LRO84_00905	COG2205	protein histidine kinase activity
LRO84_00905	COG0784	Response regulator, receiver
LRO84_00910	COG3162	membrane
LRO84_00915	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LRO84_00925	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LRO84_00945	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LRO84_00950	COG1309	transcriptional regulator
LRO84_00970	COG0300	oxidoreductase activity
LRO84_00975	COG0789	Transcriptional regulator
LRO84_00980	COG0352	thiamine-phosphate diphosphorylase activity
LRO84_00980	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LRO84_00980	COG0351	phosphomethylpyrimidine kinase
LRO84_00990	COG2814	Major facilitator Superfamily
LRO84_00995	COG0629	single-stranded DNA binding
LRO84_01000	COG2267	carboxylic ester hydrolase activity
LRO84_01005	COG2378	regulation of single-species biofilm formation
LRO84_01020	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LRO84_01030	COG1113	amino acid transport
LRO84_01040	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LRO84_01045	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_01055	COG1335	isochorismatase
LRO84_01095	COG2814	Major facilitator Superfamily
LRO84_01100	COG0583	DNA-binding transcription factor activity
LRO84_01120	COG0475	glutathione-regulated potassium exporter activity
LRO84_01140	COG1309	transcriptional regulator
LRO84_01160	COG0667	Aldo Keto reductase
LRO84_01200	COG1733	regulation of RNA biosynthetic process
LRO84_01205	COG2249	NAD(P)H dehydrogenase (quinone) activity
LRO84_01225	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LRO84_01230	COG2207	Transcriptional regulator
LRO84_01290	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LRO84_01305	COG2329	Antibiotic biosynthesis monooxygenase
LRO84_01320	COG4619	ABC transporter
LRO84_01340	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LRO84_01370	COG0427	acetyl-CoA hydrolase
LRO84_01395	COG0659	secondary active sulfate transmembrane transporter activity
LRO84_01400	COG4221	oxidoreductase activity
LRO84_01410	COG2814	Major facilitator Superfamily
LRO84_01420	COG2873	o-acetylhomoserine
LRO84_01425	COG0488	(ABC) transporter
LRO84_01500	COG0833	amino acid
LRO84_01545	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LRO84_01550	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LRO84_01565	COG2226	methyltransferase
LRO84_01615	COG0067	glutamate synthase
LRO84_01615	COG0070	glutamate synthase
LRO84_01615	COG0069	glutamate synthase activity
LRO84_01620	COG0493	'glutamate synthase
LRO84_01630	COG1704	LemA family
LRO84_01635	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
LRO84_01645	COG4969	Belongs to the N-Me-Phe pilin family
LRO84_01650	COG3307	-O-antigen
LRO84_01655	COG3307	-O-antigen
LRO84_01675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LRO84_01690	COG0194	GDP metabolic process
LRO84_01740	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LRO84_01750	COG0335	large ribosomal subunit rRNA binding
LRO84_01760	COG5380	lipid catabolic process
LRO84_01765	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LRO84_01780	COG5006	permease, DMT superfamily
LRO84_01790	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LRO84_01795	COG0277	FAD linked oxidase domain protein
LRO84_01810	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LRO84_01815	COG2249	NAD(P)H dehydrogenase (quinone) activity
LRO84_01835	COG1289	transmembrane transporter activity
LRO84_01845	COG0628	permease
LRO84_01850	COG1192	Involved in chromosome partitioning
LRO84_01880	COG0833	amino acid
LRO84_01885	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LRO84_01890	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LRO84_01900	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_01940	COG0583	DNA-binding transcription factor activity
LRO84_01945	COG1794	racemase activity, acting on amino acids and derivatives
LRO84_01950	COG0583	DNA-binding transcription factor activity
LRO84_01975	COG0752	glycyl-tRNA synthetase alpha subunit
LRO84_01990	COG0617	tRNA 3'-terminal CCA addition
LRO84_01990	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LRO84_01990	COG0517	IMP dehydrogenase activity
LRO84_01995	COG1983	PspC domain protein
LRO84_02005	COG1960	acyl-CoA dehydrogenase activity
LRO84_02020	COG0408	coproporphyrinogen oxidase activity
LRO84_02040	COG0513	Belongs to the DEAD box helicase family
LRO84_02050	COG1127	ABC transporter
LRO84_02055	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LRO84_02075	COG0598	Magnesium transport protein CorA
LRO84_02085	COG0494	nUDIX hydrolase
LRO84_02090	COG1040	competence protein
LRO84_02095	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LRO84_02110	COG2937	Belongs to the GPAT DAPAT family
LRO84_02115	COG1946	Acyl-CoA thioesterase
LRO84_02120	COG1301	dicarboxylic acid transport
LRO84_02135	COG1959	2 iron, 2 sulfur cluster binding
LRO84_02140	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LRO84_02140	COG1017	nitric oxide dioxygenase activity
LRO84_02145	COG0433	COG0433 Predicted ATPase
LRO84_02150	COG0626	cystathionine gamma-synthase activity
LRO84_02165	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LRO84_02170	COG0088	Forms part of the polypeptide exit tunnel
LRO84_02190	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LRO84_02230	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LRO84_02305	COG1960	acyl-CoA dehydrogenase activity
LRO84_02310	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LRO84_02340	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LRO84_02345	COG0339	signal peptide processing
LRO84_02350	COG0557	exoribonuclease II activity
LRO84_02395	COG0179	Fumarylacetoacetate (FAA) hydrolase
LRO84_02400	COG1295	ribonuclease BN
LRO84_02435	COG1702	phosphate starvation-inducible protein PhoH
LRO84_02445	COG0741	lytic transglycosylase activity
LRO84_02445	COG1196	nuclear chromosome segregation
LRO84_02445	COG0739	heme binding
LRO84_02475	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LRO84_02480	COG1183	phosphatidylcholine synthase activity
LRO84_02530	COG1960	acyl-CoA dehydrogenase activity
LRO84_02545	COG1309	transcriptional regulator
LRO84_02560	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LRO84_02565	COG1960	acyl-CoA dehydrogenase activity
LRO84_02605	COG2969	positive regulation of protein catabolic process
LRO84_02615	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LRO84_02620	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LRO84_02625	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LRO84_02630	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LRO84_02635	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LRO84_02655	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LRO84_02665	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LRO84_02670	COG1408	metallophosphoesterase
LRO84_02675	COG2885	chlorophyll binding
LRO84_02680	COG2199	diguanylate cyclase activity
LRO84_02715	COG1283	sodium-dependent phosphate transmembrane transporter activity
LRO84_02720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LRO84_02745	COG1607	acyl-coa hydrolase
LRO84_02775	COG2350	Protein conserved in bacteria
LRO84_02785	COG0613	PHP domain protein
LRO84_02790	COG3781	membrane
LRO84_02800	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LRO84_02805	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LRO84_02815	COG1862	Preprotein translocase
LRO84_02855	COG2205	protein histidine kinase activity
LRO84_02855	COG3437	response regulator, receiver
LRO84_02855	COG3850	Histidine kinase
LRO84_02855	COG4999	Histidine kinase
LRO84_02860	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LRO84_02885	COG0463	Glycosyl transferase, family 2
LRO84_02890	COG0438	transferase activity, transferring glycosyl groups
LRO84_02905	COG1215	transferase activity, transferring glycosyl groups
LRO84_02905	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LRO84_02925	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LRO84_02960	COG0625	glutathione transferase activity
LRO84_02965	COG0583	DNA-binding transcription factor activity
LRO84_02970	COG1960	acyl-CoA dehydrogenase activity
LRO84_02975	COG1960	acyl-CoA dehydrogenase activity
LRO84_02985	COG2205	protein histidine kinase activity
LRO84_02990	COG0745	RESPONSE REGULATOR receiver
LRO84_03000	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LRO84_03020	COG2096	Adenosyltransferase
LRO84_03025	COG4206	TonB-dependent receptor
LRO84_03070	COG0285	dihydrofolate synthase activity
LRO84_03090	COG0450	alkyl hydroperoxide reductase
LRO84_03110	COG0477	Major facilitator Superfamily
LRO84_03115	COG1272	protein, Hemolysin III
LRO84_03125	COG2153	protein acetylation
LRO84_03145	COG0183	Belongs to the thiolase family
LRO84_03150	COG2207	Transcriptional regulator
LRO84_03170	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LRO84_03190	COG0183	Belongs to the thiolase family
LRO84_03200	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LRO84_03200	COG2885	chlorophyll binding
LRO84_03210	COG1690	Belongs to the RtcB family
LRO84_03215	COG0833	amino acid
LRO84_03225	COG2233	PERMEase
LRO84_03230	COG1217	gtp-binding protein TYPA
LRO84_03255	COG2094	Belongs to the DNA glycosylase MPG family
LRO84_03260	COG4772	TonB-dependent receptor
LRO84_03265	COG1902	pentaerythritol trinitrate reductase activity
LRO84_03280	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LRO84_03285	COG0354	folic acid binding
LRO84_03305	COG2824	Alkylphosphonate utilization operon protein PhnA
LRO84_03310	COG3422	double-strand break repair
LRO84_03350	COG0840	transmembrane signaling receptor activity
LRO84_03385	COG2832	Protein of unknown function (DUF454)
LRO84_03390	COG1376	ErfK ybiS ycfS ynhG family protein
LRO84_03430	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LRO84_03440	COG1289	transmembrane transporter activity
LRO84_03445	COG2814	Major facilitator Superfamily
LRO84_03465	COG1115	amino acid carrier protein
LRO84_03470	COG1752	Esterase of the alpha-beta hydrolase superfamily
LRO84_03475	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LRO84_03480	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
LRO84_03515	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LRO84_03525	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LRO84_03530	COG1077	Cell shape determining protein MreB Mrl
LRO84_03535	COG1792	Involved in formation and maintenance of cell shape
LRO84_03540	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LRO84_03545	COG0424	maF-like protein
LRO84_03550	COG1530	ribonuclease E activity
LRO84_03560	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LRO84_03580	COG2249	NAD(P)H dehydrogenase (quinone) activity
LRO84_03605	COG2207	Transcriptional regulator
LRO84_03660	COG1113	amino acid transport
LRO84_03665	COG2828	Protein conserved in bacteria
LRO84_03670	COG0142	geranyltranstransferase activity
LRO84_03675	COG2315	Protein conserved in bacteria
LRO84_03690	COG1752	Esterase of the alpha-beta hydrolase superfamily
LRO84_03715	COG2194	sulfuric ester hydrolase activity
LRO84_03720	COG0745	RESPONSE REGULATOR receiver
LRO84_03725	COG0642	Histidine kinase
LRO84_03735	COG0004	ammonium transporteR
LRO84_03740	COG0583	DNA-binding transcription factor activity
LRO84_03770	COG0525	valine-tRNA ligase activity
LRO84_03780	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_03790	COG0393	Putative heavy-metal-binding
LRO84_03795	COG0393	Putative heavy-metal-binding
LRO84_03800	COG1538	Outer membrane efflux protein
LRO84_03810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_03815	COG0671	phosphoesterase, PA-phosphatase related
LRO84_03840	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LRO84_03855	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LRO84_03855	COG1648	precorrin-2 dehydrogenase activity
LRO84_03860	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LRO84_03895	COG0531	amino acid
LRO84_03910	COG0321	lipoyl(octanoyl) transferase activity
LRO84_03915	COG2921	Belongs to the UPF0250 family
LRO84_03955	COG2009	succinate dehydrogenase
LRO84_03960	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LRO84_03965	COG1053	succinate dehydrogenase
LRO84_03970	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LRO84_03995	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LRO84_04015	COG2354	Protein conserved in bacteria
LRO84_04020	COG2321	neutral zinc metallopeptidase
LRO84_04040	COG2843	Capsule synthesis protein
LRO84_04055	COG0589	response to stress
LRO84_04075	COG0505	Belongs to the CarA family
LRO84_04105	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LRO84_04110	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LRO84_04160	COG0477	Major facilitator Superfamily
LRO84_04165	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LRO84_04180	COG1597	lipid kinase activity
LRO84_04185	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LRO84_04210	COG0584	glycerophosphoryl diester phosphodiesterase
LRO84_04230	COG0741	lytic transglycosylase activity
LRO84_04250	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LRO84_04300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_04305	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LRO84_04310	COG0778	Nitroreductase
LRO84_04315	COG1929	Belongs to the glycerate kinase type-1 family
LRO84_04325	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LRO84_04355	COG1115	amino acid carrier protein
LRO84_04360	COG1113	amino acid transport
LRO84_04370	COG0019	diaminopimelate decarboxylase activity
LRO84_04380	COG2267	carboxylic ester hydrolase activity
LRO84_04385	COG1280	lysine exporter protein (LysE YggA)
LRO84_04390	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LRO84_04420	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_04450	COG0697	spore germination
LRO84_04460	COG4591	ABC-type transport system involved in lipoprotein release permease component
LRO84_04465	COG1136	(ABC) transporter
LRO84_04470	COG0658	competence protein
LRO84_04470	COG2333	competence protein COMEC
LRO84_04480	COG0616	signal peptide processing
LRO84_04480	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LRO84_04490	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LRO84_04500	COG0628	permease
LRO84_04535	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LRO84_04555	COG0823	Involved in the tonB-independent uptake of proteins
LRO84_04575	COG0824	Thioesterase
LRO84_04580	COG1473	amidohydrolase
LRO84_04600	COG0047	phosphoribosylformylglycinamidine synthase activity
LRO84_04600	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LRO84_04605	COG2814	Major facilitator Superfamily
LRO84_04610	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LRO84_04615	COG1024	Enoyl-CoA hydratase
LRO84_04620	COG1051	belongs to the nudix hydrolase family
LRO84_04620	COG1056	cytidyltransferase-related domain
LRO84_04635	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LRO84_04650	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LRO84_04655	COG0602	queuosine metabolic process
LRO84_04665	COG4625	pathogenesis
LRO84_04670	COG0583	DNA-binding transcription factor activity
LRO84_04675	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LRO84_04680	COG4208	sulfate ABC transporter
LRO84_04685	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LRO84_04695	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LRO84_04700	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LRO84_04705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LRO84_04725	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LRO84_04735	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LRO84_04740	COG0481	GTPase activity
LRO84_04745	COG0681	Belongs to the peptidase S26 family
LRO84_04755	COG0571	ribonuclease III activity
LRO84_04760	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LRO84_04775	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LRO84_04785	COG4221	oxidoreductase activity
LRO84_04815	COG0436	Aminotransferase
LRO84_04835	COG0556	nucleotide-excision repair
LRO84_04890	COG2070	2-Nitropropane dioxygenase
LRO84_04920	COG1215	transferase activity, transferring glycosyl groups
LRO84_04935	COG0415	Belongs to the DNA photolyase family
LRO84_04945	COG1252	NADH dehydrogenase
LRO84_04950	COG1686	Belongs to the peptidase S11 family
LRO84_04965	COG1187	pseudouridine synthase activity
LRO84_04980	COG0477	Major facilitator Superfamily
LRO84_04985	COG0583	DNA-binding transcription factor activity
LRO84_04990	COG1823	symporter activity
LRO84_05000	COG0612	Peptidase, M16
LRO84_05025	COG0352	thiamine-phosphate diphosphorylase activity
LRO84_05060	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LRO84_05075	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LRO84_05080	COG0076	glutamate decarboxylase activity
LRO84_05090	COG1522	sequence-specific DNA binding
LRO84_05095	COG3961	Belongs to the TPP enzyme family
LRO84_05100	COG1113	amino acid transport
LRO84_05105	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LRO84_05110	COG0573	inorganic phosphate transmembrane transporter activity
LRO84_05120	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LRO84_05125	COG0616	signal peptide processing
LRO84_05165	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LRO84_05170	COG1686	Belongs to the peptidase S11 family
LRO84_05195	COG0583	DNA-binding transcription factor activity
LRO84_05200	COG1067	ATP-dependent peptidase activity
LRO84_05220	COG0254	rRNA binding
LRO84_05240	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LRO84_05245	COG1966	Carbon starvation protein
LRO84_05250	COG2879	small protein
LRO84_05265	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LRO84_05275	COG0583	DNA-binding transcription factor activity
LRO84_05280	COG2814	Major facilitator Superfamily
LRO84_05300	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_05305	COG1454	alcohol dehydrogenase
LRO84_05310	COG3485	protocatechuate 3,4-dioxygenase
LRO84_05325	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LRO84_05330	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LRO84_05335	COG0183	Belongs to the thiolase family
LRO84_05385	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LRO84_05390	COG2423	ornithine cyclodeaminase activity
LRO84_05400	COG2964	Protein conserved in bacteria
LRO84_05410	COG1741	Belongs to the pirin family
LRO84_05425	COG3739	integral membrane protein
LRO84_05445	COG0302	gtp cyclohydrolase
LRO84_05455	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LRO84_05480	COG0512	Glutamine amidotransferase of anthranilate synthase
LRO84_05585	COG0174	glutamine synthetase
LRO84_05595	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LRO84_05630	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LRO84_05635	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LRO84_05640	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LRO84_05650	COG0280	phosphate acetyltransferase
LRO84_05650	COG0281	malic enzyme
LRO84_05660	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LRO84_05665	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LRO84_05670	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LRO84_05685	COG1960	acyl-CoA dehydrogenase activity
LRO84_05690	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LRO84_05695	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LRO84_05705	COG2223	nitrite transmembrane transporter activity
LRO84_05715	COG0024	Methionine aminopeptidase
LRO84_05720	COG0052	Belongs to the universal ribosomal protein uS2 family
LRO84_05735	COG2207	Transcriptional regulator
LRO84_05760	COG2951	lytic endotransglycosylase activity
LRO84_05765	COG0772	Belongs to the SEDS family
LRO84_05780	COG0842	Transport permease protein
LRO84_05785	COG1131	(ABC) transporter
LRO84_05830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_05845	COG4215	(ABC) transporter
LRO84_05850	COG4160	amino acid transport
LRO84_05855	COG4598	ABC transporter
LRO84_05865	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LRO84_05870	COG0826	peptidase U32
LRO84_05875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LRO84_05880	COG0384	phenazine biosynthesis protein PhzF
LRO84_05890	COG1720	tRNA m6t6A37 methyltransferase activity
LRO84_05900	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LRO84_05915	COG0642	Histidine kinase
LRO84_05925	COG0494	nUDIX hydrolase
LRO84_05935	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LRO84_05940	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LRO84_05945	COG3139	Protein of unknown function (DUF1315)
LRO84_05960	COG1301	dicarboxylic acid transport
LRO84_05965	COG1960	acyl-CoA dehydrogenase activity
LRO84_05975	COG2819	hydrolase of the alpha beta superfamily
LRO84_05985	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LRO84_05995	COG2195	Cleaves the N-terminal amino acid of tripeptides
LRO84_06015	COG1690	Belongs to the RtcB family
LRO84_06020	COG1234	tRNA 3'-trailer cleavage
LRO84_06025	COG4650	regulator
LRO84_06055	COG2363	Small membrane protein
LRO84_06080	COG0513	Belongs to the DEAD box helicase family
LRO84_06090	COG0778	Nitroreductase
LRO84_06120	COG1286	toxin biosynthetic process
LRO84_06150	COG1610	YqeY-like protein
LRO84_06205	COG1278	Cold shock
LRO84_06230	COG0534	Mate efflux family protein
LRO84_06240	COG1309	transcriptional regulator
LRO84_06250	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LRO84_06255	COG4221	oxidoreductase activity
LRO84_06260	COG1733	regulation of RNA biosynthetic process
LRO84_06265	COG2085	NADP oxidoreductase coenzyme F420-dependent
LRO84_06285	COG3243	poly(R)-hydroxyalkanoic acid synthase
LRO84_06290	COG0786	glutamate:sodium symporter activity
LRO84_06295	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LRO84_06295	COG0475	glutathione-regulated potassium exporter activity
LRO84_06330	COG2985	domain, Protein
LRO84_06345	COG0583	DNA-binding transcription factor activity
LRO84_06355	COG2995	paraquat-inducible protein a
LRO84_06360	COG3008	intermembrane lipid transfer
LRO84_06360	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LRO84_06370	COG2351	hydroxyisourate hydrolase activity
LRO84_06410	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LRO84_06420	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LRO84_06425	COG0642	Histidine kinase
LRO84_06430	COG0745	RESPONSE REGULATOR receiver
LRO84_06455	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LRO84_06460	COG1794	racemase activity, acting on amino acids and derivatives
LRO84_06470	COG2175	clavaminate synthase activity
LRO84_06475	COG3246	L-lysine catabolic process to acetate
LRO84_06495	COG2855	membrane
LRO84_06530	COG2814	Major facilitator Superfamily
LRO84_06555	COG1301	dicarboxylic acid transport
LRO84_06570	COG2011	ABC-type metal ion transport system permease component
LRO84_06575	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LRO84_06585	COG0151	Belongs to the GarS family
LRO84_06590	COG0138	bifunctional purine biosynthesis protein purh
LRO84_06595	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LRO84_06625	COG2308	Evidence 4 Homologs of previously reported genes of
LRO84_06635	COG1305	Transglutaminase-like
LRO84_06645	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LRO84_06650	COG0305	Participates in initiation and elongation during chromosome replication
LRO84_06675	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LRO84_06680	COG1845	cytochrome c oxidase, subunit III
LRO84_06685	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LRO84_06690	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LRO84_06715	COG0726	polysaccharide deacetylase
LRO84_06715	COG1649	PFAM Uncharacterised BCR, COG1649
LRO84_06720	COG1215	transferase activity, transferring glycosyl groups
LRO84_06725	COG3658	cytochrome
LRO84_06735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LRO84_06750	COG0583	DNA-binding transcription factor activity
LRO84_06785	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LRO84_06800	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LRO84_06810	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LRO84_06815	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LRO84_06825	COG2205	protein histidine kinase activity
LRO84_06830	COG0745	RESPONSE REGULATOR receiver
LRO84_06835	COG0174	glutamine synthetase
LRO84_06850	COG0477	Major facilitator Superfamily
LRO84_06855	COG0729	surface antigen
LRO84_06865	COG2706	6-phosphogluconolactonase activity
LRO84_06885	COG0471	metal ion transport
LRO84_06895	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LRO84_06900	COG2814	Major facilitator Superfamily
LRO84_06910	COG0583	DNA-binding transcription factor activity
LRO84_06925	COG1187	pseudouridine synthase activity
LRO84_06945	COG0802	atpase or kinase
LRO84_06950	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LRO84_06960	COG1923	regulation of RNA biosynthetic process
LRO84_06965	COG0697	spore germination
LRO84_06990	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LRO84_07000	COG0519	Catalyzes the synthesis of GMP from XMP
LRO84_07000	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LRO84_07005	COG4302	ethanolamine ammonia-lyase activity
LRO84_07010	COG4303	Ethanolamine ammonia lyase large subunit
LRO84_07015	COG0531	amino acid
LRO84_07035	COG1454	alcohol dehydrogenase
LRO84_07040	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LRO84_07065	COG0308	aminopeptidase N
LRO84_07105	COG1605	Chorismate mutase
LRO84_07120	COG4772	TonB-dependent receptor
LRO84_07165	COG1733	regulation of RNA biosynthetic process
LRO84_07200	COG3111	PFAM Bacterial OB fold (BOF) protein
LRO84_07220	COG0488	(ABC) transporter
LRO84_07225	COG0589	response to stress
LRO84_07245	COG3135	benzoate transporter
LRO84_07250	COG1522	sequence-specific DNA binding
LRO84_07260	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LRO84_07265	COG0583	DNA-binding transcription factor activity
LRO84_07275	COG0183	Belongs to the thiolase family
LRO84_07280	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_07285	COG2030	dehydratase
LRO84_07315	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LRO84_07325	COG0824	Thioesterase
LRO84_07330	COG1454	alcohol dehydrogenase
LRO84_07340	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LRO84_07370	COG0069	glutamate synthase activity
LRO84_07460	COG2814	Major facilitator Superfamily
LRO84_07475	COG0511	ligase activity, forming carbon-carbon bonds
LRO84_07500	COG4264	IucA IucC family
LRO84_07510	COG4264	IucA IucC family
LRO84_07515	COG2423	ornithine cyclodeaminase activity
LRO84_07520	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LRO84_07530	COG1116	anion transmembrane transporter activity
LRO84_07530	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LRO84_07545	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LRO84_07545	COG2146	nitrite reductase [NAD(P)H] activity
LRO84_07550	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LRO84_07555	COG0243	molybdopterin cofactor binding
LRO84_07565	COG0243	molybdopterin cofactor binding
LRO84_07585	COG0521	Mo-molybdopterin cofactor biosynthetic process
LRO84_07585	COG0315	cyclic pyranopterin monophosphate synthase activity
LRO84_07590	COG0303	'Molybdopterin
LRO84_07600	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LRO84_07605	COG0697	spore germination
LRO84_07630	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LRO84_07650	COG1335	isochorismatase
LRO84_07690	COG2204	response regulator
LRO84_07695	COG3852	Histidine kinase
LRO84_07720	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LRO84_07725	COG0575	Belongs to the CDS family
LRO84_07760	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LRO84_07775	COG2137	regulation of response to DNA damage stimulus
LRO84_07785	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LRO84_07790	COG1011	Hydrolase
LRO84_07805	COG1522	sequence-specific DNA binding
LRO84_07815	COG1113	amino acid transport
LRO84_07840	COG0659	secondary active sulfate transmembrane transporter activity
LRO84_07860	COG5001	Diguanylate cyclase
LRO84_07860	COG3300	MHYT domain
LRO84_07875	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LRO84_07875	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LRO84_07875	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LRO84_07880	COG1105	Belongs to the carbohydrate kinase PfkB family
LRO84_07885	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LRO84_07885	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LRO84_07915	COG0024	Methionine aminopeptidase
LRO84_07920	COG0583	DNA-binding transcription factor activity
LRO84_07935	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LRO84_07940	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LRO84_07940	COG0517	IMP dehydrogenase activity
LRO84_07965	COG0552	protein localization to endoplasmic reticulum
LRO84_07975	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LRO84_07990	COG4890	Cyd operon protein YbgT
LRO84_07995	COG1294	oxidase, subunit
LRO84_08010	COG1585	Membrane protein implicated in regulation of membrane protease activity
LRO84_08020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LRO84_08035	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LRO84_08040	COG0569	domain protein
LRO84_08045	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LRO84_08075	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LRO84_08080	COG0542	response to heat
LRO84_08090	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LRO84_08105	COG0446	pyridine nucleotide-disulphide oxidoreductase
LRO84_08105	COG1902	pentaerythritol trinitrate reductase activity
LRO84_08145	COG0148	phosphopyruvate hydratase activity
LRO84_08150	COG2323	membrane
LRO84_08165	COG4773	Receptor
LRO84_08170	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LRO84_08180	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LRO84_08185	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LRO84_08190	COG0183	Belongs to the thiolase family
LRO84_08195	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LRO84_08200	COG0596	Alpha beta hydrolase
LRO84_08205	COG2271	Major facilitator Superfamily
LRO84_08210	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LRO84_08215	COG3485	protocatechuate 3,4-dioxygenase
LRO84_08220	COG3485	protocatechuate 3,4-dioxygenase
LRO84_08225	COG0710	3-dehydroquinate dehydratase activity
LRO84_08230	COG3420	alginic acid biosynthetic process
LRO84_08235	COG3659	wide pore channel activity
LRO84_08240	COG4993	Dehydrogenase
LRO84_08250	COG2391	methyltransferase activity
LRO84_08265	COG1414	Transcriptional regulator
LRO84_08270	COG0583	DNA-binding transcription factor activity
LRO84_08275	COG1960	acyl-CoA dehydrogenase activity
LRO84_08300	COG2814	Major facilitator Superfamily
LRO84_08310	COG0154	amidase activity
LRO84_08340	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08350	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LRO84_08360	COG3733	amine oxidase
LRO84_08375	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_08380	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LRO84_08385	COG0183	Belongs to the thiolase family
LRO84_08390	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LRO84_08395	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LRO84_08405	COG4829	muconolactone delta-isomerase
LRO84_08410	COG4948	Mandelate Racemase Muconate Lactonizing
LRO84_08415	COG0583	DNA-binding transcription factor activity
LRO84_08425	COG2186	Transcriptional regulator
LRO84_08445	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_08450	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08455	COG1414	Transcriptional regulator
LRO84_08460	COG1053	succinate dehydrogenase
LRO84_08475	COG3659	wide pore channel activity
LRO84_08480	COG1309	transcriptional regulator
LRO84_08490	COG3971	2-oxopent-4-enoate hydratase activity
LRO84_08495	COG4569	acetaldehyde dehydrogenase (acetylating) activity
LRO84_08515	COG0583	DNA-binding transcription factor activity
LRO84_08520	COG4638	Rieske (2fe-2S)
LRO84_08525	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LRO84_08535	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08540	COG3384	dioxygenase
LRO84_08545	COG0446	pyridine nucleotide-disulphide oxidoreductase
LRO84_08550	COG2814	Major facilitator Superfamily
LRO84_08555	COG2814	Major facilitator Superfamily
LRO84_08560	COG0583	DNA-binding transcription factor activity
LRO84_08610	COG1309	transcriptional regulator
LRO84_08630	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LRO84_08630	COG3321	synthase
LRO84_08630	COG4221	oxidoreductase activity
LRO84_08630	COG0604	alcohol dehydrogenase
LRO84_08635	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08655	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_08680	COG1902	pentaerythritol trinitrate reductase activity
LRO84_08690	COG1733	regulation of RNA biosynthetic process
LRO84_08695	COG0702	epimerase
LRO84_08705	COG1309	transcriptional regulator
LRO84_08735	COG0583	DNA-binding transcription factor activity
LRO84_08750	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08755	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08760	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_08770	COG1960	acyl-CoA dehydrogenase activity
LRO84_08780	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_08835	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LRO84_08840	COG1073	alpha beta
LRO84_08845	COG0583	DNA-binding transcription factor activity
LRO84_08895	COG1902	pentaerythritol trinitrate reductase activity
LRO84_08905	COG1566	PFAM secretion protein HlyD family protein
LRO84_08935	COG2207	Transcriptional regulator
LRO84_08940	COG1064	alcohol dehydrogenase
LRO84_08965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LRO84_08970	COG1120	ATPase activity
LRO84_08990	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LRO84_09120	COG4628	conserved protein (DUF2132)
LRO84_09135	COG3539	Fimbrial protein
LRO84_09160	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LRO84_09170	COG0753	catalase activity
LRO84_09190	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LRO84_09200	COG2205	protein histidine kinase activity
LRO84_09205	COG0745	RESPONSE REGULATOR receiver
LRO84_09210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_09215	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LRO84_09270	COG4771	TonB-dependent receptor
LRO84_09275	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LRO84_09280	COG1535	isochorismatase
LRO84_09280	COG3433	isochorismatase activity
LRO84_09290	COG1021	2,3-dihydroxybenzoate-AMP ligase
LRO84_09295	COG1169	isochorismate synthase
LRO84_09300	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_09305	COG2382	esterase
LRO84_09310	COG3251	PFAM MbtH domain protein
LRO84_09315	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LRO84_09340	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LRO84_09345	COG4149	molybdate abc transporter
LRO84_09350	COG0725	ABC transporter, periplasmic molybdate-binding protein
LRO84_09360	COG4638	Rieske (2fe-2S)
LRO84_09365	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LRO84_09370	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LRO84_09370	COG0543	2 iron, 2 sulfur cluster binding
LRO84_09395	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_09415	COG2207	Transcriptional regulator
LRO84_09420	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_09425	COG2610	gluconate transmembrane transporter activity
LRO84_09480	COG0583	DNA-binding transcription factor activity
LRO84_09495	COG2031	fatty acid transporter
LRO84_09500	COG0183	Belongs to the thiolase family
LRO84_09505	COG0583	DNA-binding transcription factor activity
LRO84_09510	COG0583	DNA-binding transcription factor activity
LRO84_09525	COG1027	Aspartate ammonia-lyase
LRO84_09535	COG0477	Major facilitator Superfamily
LRO84_09545	COG2207	Transcriptional regulator
LRO84_09545	COG3708	Transcriptional regulator
LRO84_09560	COG0730	response to heat
LRO84_09575	COG3453	Protein conserved in bacteria
LRO84_09575	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LRO84_09585	COG3781	membrane
LRO84_09590	COG1063	alcohol dehydrogenase
LRO84_09600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LRO84_09605	COG0508	dehydrogenase complex catalyzes the overall conversion of
LRO84_09610	COG0022	dehydrogenase e1 component
LRO84_09615	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LRO84_09620	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LRO84_09635	COG3706	GGDEF domain
LRO84_09655	COG0133	tryptophan synthase activity
LRO84_09665	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LRO84_09695	COG0583	DNA-binding transcription factor activity
LRO84_09700	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LRO84_09710	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LRO84_09770	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LRO84_09775	COG4773	Receptor
LRO84_09795	COG0730	response to heat
LRO84_09800	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LRO84_09835	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LRO84_09845	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LRO84_09860	COG1960	acyl-CoA dehydrogenase activity
LRO84_09865	COG1960	acyl-CoA dehydrogenase activity
LRO84_09870	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LRO84_09875	COG2207	Transcriptional regulator
LRO84_09880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LRO84_09885	COG0776	regulation of translation
LRO84_09910	COG0822	iron-sulfur transferase activity
LRO84_09915	COG0316	Belongs to the HesB IscA family
LRO84_09945	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LRO84_09965	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LRO84_09970	COG0702	epimerase
LRO84_10000	COG4172	Belongs to the ABC transporter superfamily
LRO84_10010	COG0601	transmembrane transport
LRO84_10015	COG0339	signal peptide processing
LRO84_10020	COG4166	transmembrane transport
LRO84_10060	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LRO84_10065	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LRO84_10080	COG2431	L-lysine efflux transmembrane transporter activity
LRO84_10095	COG0776	regulation of translation
LRO84_10160	COG0084	hydrolase, TatD family'
LRO84_10180	COG1663	tetraacyldisaccharide 4'-kinase activity
LRO84_10185	COG1132	(ABC) transporter
LRO84_10195	COG0811	peptide transport
LRO84_10200	COG1475	DNA binding
LRO84_10205	COG1192	Involved in chromosome partitioning
LRO84_10215	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LRO84_10230	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LRO84_10235	COG0191	fructose-bisphosphate aldolase activity
LRO84_10255	COG0424	maF-like protein
LRO84_10260	COG2850	peptidyl-arginine hydroxylation
LRO84_10270	COG0640	Transcriptional regulator
LRO84_10280	COG3619	membrane
LRO84_10285	COG3122	Protein conserved in bacteria
LRO84_10290	COG1132	(ABC) transporter
LRO84_10310	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LRO84_10315	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LRO84_10325	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LRO84_10325	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LRO84_10325	COG0506	proline dehydrogenase activity
LRO84_10330	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LRO84_10345	COG3698	Phosphodiester glycosidase
LRO84_10355	COG2353	YceI-like domain
LRO84_10365	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LRO84_10410	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LRO84_10410	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LRO84_10435	COG3539	Fimbrial protein
LRO84_10470	COG0583	DNA-binding transcription factor activity
LRO84_10475	COG0697	spore germination
LRO84_10485	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LRO84_10495	COG0583	DNA-binding transcription factor activity
LRO84_10510	COG1309	transcriptional regulator
LRO84_10525	COG1522	sequence-specific DNA binding
LRO84_10535	COG1126	abc transporter atp-binding protein
LRO84_10540	COG0765	amino acid transport
LRO84_10545	COG0765	amino acid transport
LRO84_10550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LRO84_10575	COG1464	Belongs to the NlpA lipoprotein family
LRO84_10580	COG1464	Belongs to the NlpA lipoprotein family
LRO84_10585	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LRO84_10590	COG2011	ABC-type metal ion transport system permease component
LRO84_10595	COG0012	GTP binding
LRO84_10620	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LRO84_10655	COG2207	Transcriptional regulator
LRO84_10655	COG1917	Cupin 2, conserved barrel domain protein
LRO84_10660	COG0386	Belongs to the glutathione peroxidase family
LRO84_10670	COG0436	Aminotransferase
LRO84_10675	COG1301	dicarboxylic acid transport
LRO84_10710	COG3634	alkyl hydroperoxide reductase activity
LRO84_10725	COG0583	DNA-binding transcription factor activity
LRO84_10730	COG0431	NADPH-dependent FMN reductase
LRO84_10735	COG0798	PFAM Bile acid sodium symporter
LRO84_10745	COG0640	Transcriptional regulator
LRO84_10760	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LRO84_10770	COG0583	DNA-binding transcription factor activity
LRO84_10780	COG1953	Uracil, thiamine, allantoin
LRO84_10790	COG2175	clavaminate synthase activity
LRO84_10795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LRO84_10800	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LRO84_10805	COG4521	taurine ABC transporter
LRO84_10815	COG0477	Major facilitator Superfamily
LRO84_10835	COG1271	oxidase subunit
LRO84_10840	COG1294	oxidase, subunit
LRO84_10850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LRO84_10870	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LRO84_10890	COG3052	prosthetic group binding
LRO84_10895	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
LRO84_10920	COG1346	cytolysis
LRO84_10930	COG0583	DNA-binding transcription factor activity
LRO84_10935	COG0625	glutathione transferase activity
LRO84_10940	COG0625	glutathione transferase activity
LRO84_10960	COG1280	lysine exporter protein (LysE YggA)
LRO84_10965	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LRO84_10985	COG2205	protein histidine kinase activity
LRO84_10985	COG0784	Response regulator, receiver
LRO84_11005	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LRO84_11030	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_11070	COG0583	DNA-binding transcription factor activity
LRO84_11080	COG2814	Major facilitator Superfamily
LRO84_11095	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_11100	COG1309	transcriptional regulator
LRO84_11105	COG1960	acyl-CoA dehydrogenase activity
LRO84_11110	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LRO84_11115	COG1024	Enoyl-CoA hydratase
LRO84_11120	COG4770	biotin carboxylase activity
LRO84_11130	COG0583	DNA-binding transcription factor activity
LRO84_11145	COG1960	acyl-CoA dehydrogenase activity
LRO84_11155	COG2814	Major facilitator Superfamily
LRO84_11165	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LRO84_11170	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LRO84_11175	COG2814	Major facilitator Superfamily
LRO84_11180	COG2814	Major facilitator Superfamily
LRO84_11185	COG1960	acyl-CoA dehydrogenase activity
LRO84_11190	COG1024	Enoyl-CoA hydratase
LRO84_11195	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_11200	COG1250	3-hydroxyacyl-CoA dehydrogenase
LRO84_11205	COG0183	Belongs to the thiolase family
LRO84_11215	COG2814	Major facilitator Superfamily
LRO84_11225	COG1024	Enoyl-CoA hydratase
LRO84_11235	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LRO84_11240	COG1960	acyl-CoA dehydrogenase activity
LRO84_11245	COG2814	Major facilitator Superfamily
LRO84_11250	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LRO84_11255	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LRO84_11270	COG3842	ATPase activity
LRO84_11275	COG1840	ABC-type Fe3 transport system, periplasmic component
LRO84_11285	COG1280	lysine exporter protein (LysE YggA)
LRO84_11295	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LRO84_11300	COG1414	Transcriptional regulator
LRO84_11320	COG0406	alpha-ribazole phosphatase activity
LRO84_11340	COG1760	l-serine dehydratase
LRO84_11355	COG0789	Transcriptional regulator
LRO84_11365	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LRO84_11370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LRO84_11430	COG2885	chlorophyll binding
LRO84_11485	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LRO84_11555	COG0477	Major facilitator Superfamily
LRO84_11570	COG1116	anion transmembrane transporter activity
LRO84_11585	COG0864	Transcriptional regulator
LRO84_11600	COG1733	regulation of RNA biosynthetic process
LRO84_11605	COG2249	NAD(P)H dehydrogenase (quinone) activity
LRO84_11610	COG0439	Biotin carboxylase
LRO84_11625	COG1250	3-hydroxyacyl-CoA dehydrogenase
LRO84_11665	COG0038	chloride channel
LRO84_11670	COG4770	biotin carboxylase activity
LRO84_11690	COG1914	H( )-stimulated, divalent metal cation uptake system
LRO84_11695	COG0583	DNA-binding transcription factor activity
LRO84_11705	COG1595	DNA-templated transcription, initiation
LRO84_11715	COG3220	belongs to the UPF0276 family
LRO84_11775	COG1051	belongs to the nudix hydrolase family
LRO84_11780	COG2814	Major facilitator Superfamily
LRO84_11790	COG0583	DNA-binding transcription factor activity
LRO84_11795	COG1309	transcriptional regulator
LRO84_11810	COG0657	acetylesterase activity
LRO84_11830	COG3712	iron ion homeostasis
LRO84_11855	COG0402	S-adenosylhomocysteine deaminase activity
LRO84_11860	COG0583	DNA-binding transcription factor activity
LRO84_11885	COG1522	sequence-specific DNA binding
LRO84_11915	COG2207	Transcriptional regulator
LRO84_11960	COG0531	amino acid
LRO84_11965	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LRO84_11980	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LRO84_11990	COG3344	reverse transcriptase
LRO84_12005	COG2050	protein possibly involved in aromatic compounds catabolism
LRO84_12015	COG3327	negative regulation of DNA-templated transcription, initiation
LRO84_12020	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
LRO84_12025	COG0183	Belongs to the thiolase family
LRO84_12030	COG1250	3-hydroxyacyl-CoA dehydrogenase
LRO84_12035	COG1024	Enoyl-CoA hydratase
LRO84_12040	COG1024	Enoyl-CoA hydratase
LRO84_12045	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LRO84_12050	COG2151	metal-sulfur cluster biosynthetic enzyme
LRO84_12055	COG3396	Phenylacetate-CoA oxygenase
LRO84_12060	COG3460	Phenylacetate-CoA oxygenase
LRO84_12065	COG3396	Phenylacetate-CoA oxygenase
LRO84_12070	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_12070	COG2030	dehydratase
LRO84_12095	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LRO84_12110	COG4122	O-methyltransferase activity
LRO84_12140	COG1538	Outer membrane efflux protein
LRO84_12145	COG1137	ATPase activity
LRO84_12150	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LRO84_12160	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LRO84_12205	COG2814	Major facilitator Superfamily
LRO84_12215	COG0668	transmembrane transport
LRO84_12275	COG2226	methyltransferase
LRO84_12300	COG1278	Cold shock
LRO84_12305	COG1560	Kdo2-lipid A biosynthetic process
LRO84_12310	COG1280	lysine exporter protein (LysE YggA)
LRO84_12345	COG1570	exodeoxyribonuclease VII activity
LRO84_12430	COG2871	sodium ion transport
LRO84_12440	COG0583	DNA-binding transcription factor activity
LRO84_12450	COG4638	Rieske (2fe-2S)
LRO84_12460	COG0543	2 iron, 2 sulfur cluster binding
LRO84_12460	COG0633	Ferredoxin
LRO84_12465	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_12470	COG3135	benzoate transporter
LRO84_12475	COG2814	Major facilitator Superfamily
LRO84_12490	COG1643	Atp-dependent helicase
LRO84_12505	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LRO84_12525	COG3634	alkyl hydroperoxide reductase activity
LRO84_12545	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LRO84_12570	COG0625	glutathione transferase activity
LRO84_12580	COG2885	chlorophyll binding
LRO84_12615	COG0542	response to heat
LRO84_12630	COG1765	OsmC-like protein
LRO84_12645	COG0667	Aldo Keto reductase
LRO84_12660	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LRO84_12675	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LRO84_12685	COG0527	aspartate kinase activity
LRO84_12695	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LRO84_12705	COG3038	cytochrome b561
LRO84_12710	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LRO84_12715	COG2252	PERMEase
LRO84_12725	COG1741	Belongs to the pirin family
LRO84_12730	COG1309	transcriptional regulator
LRO84_12740	COG0300	oxidoreductase activity
LRO84_12745	COG2072	flavoprotein involved in K transport
LRO84_12750	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LRO84_12780	COG1944	ATP diphosphatase activity
LRO84_12800	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LRO84_12815	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LRO84_12830	COG2814	Major facilitator Superfamily
LRO84_12835	COG1024	Enoyl-CoA hydratase
LRO84_12840	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_12850	COG1960	acyl-CoA dehydrogenase activity
LRO84_12875	COG2186	Transcriptional regulator
LRO84_12880	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_12890	COG4948	Mandelate Racemase Muconate Lactonizing
LRO84_12895	COG2271	Major facilitator Superfamily
LRO84_12900	COG2721	sulfolactate sulfo-lyase activity
LRO84_12905	COG0697	spore germination
LRO84_12925	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LRO84_12940	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LRO84_12955	COG1157	protein secretion by the type III secretion system
LRO84_12970	COG1766	The M ring may be actively involved in energy transduction
LRO84_12975	COG1677	Flagellar hook-basal body complex protein FliE
LRO84_12990	COG1706	bacterial-type flagellum-dependent cell motility
LRO84_12995	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LRO84_13005	COG4786	Flagellar basal body rod
LRO84_13015	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LRO84_13020	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LRO84_13025	COG1684	flagellar biosynthetic protein fliR
LRO84_13030	COG1987	bacterial-type flagellum assembly
LRO84_13085	COG1113	amino acid transport
LRO84_13105	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_13125	COG0531	amino acid
LRO84_13135	COG1113	amino acid transport
LRO84_13165	COG1309	transcriptional regulator
LRO84_13170	COG4269	membrane
LRO84_13200	COG0446	pyridine nucleotide-disulphide oxidoreductase
LRO84_13200	COG1902	pentaerythritol trinitrate reductase activity
LRO84_13210	COG2203	Gaf domain
LRO84_13210	COG3706	GGDEF domain
LRO84_13210	COG4251	negative regulation of phosphorylation
LRO84_13210	COG5001	Diguanylate cyclase
LRO84_13220	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LRO84_13245	COG4172	Belongs to the ABC transporter superfamily
LRO84_13250	COG4239	(ABC) transporter, permease
LRO84_13255	COG4174	ABC transporter (Permease)
LRO84_13265	COG0741	lytic transglycosylase activity
LRO84_13265	COG1388	LysM domain
LRO84_13265	COG0741	lytic transglycosylase activity
LRO84_13265	COG1388	LysM domain
LRO84_13310	COG0583	DNA-binding transcription factor activity
LRO84_13325	COG0789	Transcriptional regulator
LRO84_13335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LRO84_13340	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LRO84_13345	COG0006	proline dipeptidase activity
LRO84_13385	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LRO84_13400	COG3384	dioxygenase
LRO84_13410	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LRO84_13415	COG2878	Part of a membrane complex involved in electron transport
LRO84_13420	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LRO84_13445	COG0768	penicillin binding
LRO84_13450	COG0742	ribosomal rna small subunit methyltransferase
LRO84_13470	COG0830	nickel cation binding
LRO84_13480	COG0804	urea catabolic process
LRO84_13505	COG3015	lipoprotein NlpE involved in copper resistance
LRO84_13520	COG1253	flavin adenine dinucleotide binding
LRO84_13525	COG2851	Citrate transporter
LRO84_13575	COG1773	rubredoxin
LRO84_13580	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LRO84_13590	COG0583	DNA-binding transcription factor activity
LRO84_13620	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LRO84_13625	COG4181	ATPase activity
LRO84_13650	COG4771	TonB-dependent receptor
LRO84_13670	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LRO84_13690	COG0306	phosphate transporter
LRO84_13700	COG0653	protein targeting
LRO84_13725	COG2223	nitrite transmembrane transporter activity
LRO84_13730	COG2207	Transcriptional regulator
LRO84_13735	COG2066	Belongs to the glutaminase family
LRO84_13740	COG0242	peptide deformylase activity
LRO84_13745	COG0477	Major facilitator Superfamily
LRO84_13755	COG0028	Belongs to the TPP enzyme family
LRO84_13770	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_13785	COG2271	Major facilitator Superfamily
LRO84_13800	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_13820	COG1414	Transcriptional regulator
LRO84_13840	COG1024	Enoyl-CoA hydratase
LRO84_13850	COG1309	transcriptional regulator
LRO84_13860	COG1215	transferase activity, transferring glycosyl groups
LRO84_13865	COG0726	polysaccharide deacetylase
LRO84_13865	COG1649	PFAM Uncharacterised BCR, COG1649
LRO84_13875	COG4681	YaeQ
LRO84_13885	COG0523	cobalamin synthesis protein
LRO84_13895	COG1607	acyl-coa hydrolase
LRO84_13905	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LRO84_13910	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LRO84_13915	COG1309	transcriptional regulator
LRO84_13940	COG2040	homocysteine
LRO84_14000	COG1595	DNA-templated transcription, initiation
LRO84_14010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LRO84_14015	COG0477	Major facilitator Superfamily
LRO84_14085	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LRO84_14095	COG1061	Type III restriction enzyme res subunit
LRO84_14100	COG1002	Type II restriction enzyme, methylase subunits
LRO84_14125	COG0582	viral genome integration into host DNA
LRO84_14135	COG0405	Gamma-glutamyltransferase
LRO84_14140	COG2814	Major facilitator Superfamily
LRO84_14145	COG1566	PFAM secretion protein HlyD family protein
LRO84_14150	COG2050	protein possibly involved in aromatic compounds catabolism
LRO84_14165	COG1090	epimerase
LRO84_14185	COG0420	3'-5' exonuclease activity
LRO84_14210	COG0735	belongs to the Fur family
LRO84_14215	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LRO84_14220	COG2914	Belongs to the UPF0125 (RnfH) family
LRO84_14235	COG0121	glutamine amidotransferase
LRO84_14250	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LRO84_14260	COG0210	DNA helicase
LRO84_14265	COG2885	chlorophyll binding
LRO84_14270	COG0204	Acyl-transferase
LRO84_14300	COG1280	lysine exporter protein (LysE YggA)
LRO84_14305	COG1674	ftsk spoiiie
LRO84_14310	COG0492	ferredoxin-NADP+ reductase activity
LRO84_14320	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LRO84_14330	COG0456	acetyltransferase
LRO84_14345	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LRO84_14350	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LRO84_14355	COG0049	tRNA binding
LRO84_14360	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LRO84_14375	COG1981	membrane
LRO84_14385	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LRO84_14385	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LRO84_14415	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LRO84_14450	COG0358	DNA primase activity
LRO84_14465	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LRO84_14495	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LRO84_14525	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LRO84_14535	COG0352	thiamine-phosphate diphosphorylase activity
LRO84_14535	COG0351	phosphomethylpyrimidine kinase
LRO84_14535	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LRO84_14540	COG1652	LysM domain
LRO84_14550	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_14565	COG1399	metal-binding, possibly nucleic acid-binding protein
LRO84_14570	COG3101	peptidyl-lysine hydroxylation
LRO84_14575	COG0009	L-threonylcarbamoyladenylate synthase
LRO84_14580	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LRO84_14585	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LRO84_14600	COG4106	trans-aconitate 2-methyltransferase activity
LRO84_14615	COG0596	Alpha beta hydrolase
LRO84_14625	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
LRO84_14630	COG2223	nitrite transmembrane transporter activity
LRO84_14650	COG1196	nuclear chromosome segregation
LRO84_14660	COG0730	response to heat
LRO84_14675	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LRO84_14685	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LRO84_14730	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LRO84_14735	COG0489	protein tyrosine kinase activity
LRO84_14745	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LRO84_14745	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LRO84_14780	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LRO84_14785	COG2081	HI0933 family
LRO84_14795	COG0668	transmembrane transport
LRO84_14815	COG0583	DNA-binding transcription factor activity
LRO84_14835	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LRO84_14840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LRO84_14855	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LRO84_14870	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
LRO84_14895	COG2199	diguanylate cyclase activity
LRO84_14910	COG0745	RESPONSE REGULATOR receiver
LRO84_14930	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LRO84_14960	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LRO84_14965	COG0583	DNA-binding transcription factor activity
LRO84_14975	COG1104	cysteine desulfurase activity
LRO84_15030	COG1309	transcriptional regulator
LRO84_15035	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LRO84_15050	COG0583	DNA-binding transcription factor activity
LRO84_15070	COG1473	amidohydrolase
LRO84_15110	COG0583	DNA-binding transcription factor activity
LRO84_15125	COG0583	DNA-binding transcription factor activity
LRO84_15130	COG1053	succinate dehydrogenase
LRO84_15145	COG1309	transcriptional regulator
LRO84_15155	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LRO84_15160	COG2814	Major facilitator Superfamily
LRO84_15165	COG1960	acyl-CoA dehydrogenase activity
LRO84_15170	COG0583	DNA-binding transcription factor activity
LRO84_15175	COG1063	alcohol dehydrogenase
LRO84_15205	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LRO84_15210	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LRO84_15230	COG3667	copper resistance
LRO84_15235	COG2132	Multicopper oxidase
LRO84_15245	COG0561	phosphatase activity
LRO84_15250	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LRO84_15260	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LRO84_15275	COG1214	PFAM Peptidase M22, glycoprotease
LRO84_15285	COG0494	nUDIX hydrolase
LRO84_15335	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LRO84_15340	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LRO84_15345	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LRO84_15405	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LRO84_15415	COG1846	Transcriptional regulator
LRO84_15420	COG1764	response to oxidative stress
LRO84_15460	COG0037	tRNA processing
LRO84_15470	COG0248	Ppx GppA phosphatase
LRO84_15500	COG0072	phenylalanine-tRNA ligase activity
LRO84_15530	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LRO84_15540	COG1238	metal cluster binding
LRO84_15545	COG0625	glutathione transferase activity
LRO84_15550	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LRO84_15560	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_15565	COG3028	Belongs to the UPF0307 family
LRO84_15570	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LRO84_15590	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LRO84_15595	COG0617	tRNA 3'-terminal CCA addition
LRO84_15600	COG1555	photosystem II stabilization
LRO84_15605	COG3956	TIGRFAM MazG family protein
LRO84_15615	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LRO84_15630	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LRO84_15635	COG0784	Response regulator, receiver
LRO84_15635	COG2205	protein histidine kinase activity
LRO84_15635	COG5002	protein histidine kinase activity
LRO84_15640	COG1024	Enoyl-CoA hydratase
LRO84_15645	COG2084	Dehydrogenase
LRO84_15650	COG3622	Belongs to the hyi family
LRO84_15680	COG0697	spore germination
LRO84_15690	COG2814	Major facilitator Superfamily
LRO84_15695	COG5285	phytanoyl-CoA dioxygenase
LRO84_15700	COG1917	Cupin 2, conserved barrel domain protein
LRO84_15710	COG0456	acetyltransferase
LRO84_15720	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LRO84_15735	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LRO84_15750	COG0084	hydrolase, TatD family'
LRO84_15765	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LRO84_15790	COG2801	Transposase and inactivated derivatives
LRO84_15800	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LRO84_15805	COG0440	acetolactate synthase activity
LRO84_15810	COG0028	Belongs to the TPP enzyme family
LRO84_15835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LRO84_15840	COG1136	(ABC) transporter
LRO84_15840	COG0577	efflux transmembrane transporter activity
LRO84_15870	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LRO84_15875	COG1162	GTPase activity
LRO84_15885	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LRO84_15905	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LRO84_15910	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_15950	COG2986	histidine ammonia-lyase
LRO84_15960	COG1216	Glycosyl transferase, family 2
LRO84_15965	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_15975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LRO84_15980	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LRO84_16000	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LRO84_16020	COG1426	Protein conserved in bacteria
LRO84_16040	COG2975	iron-sulfur cluster assembly
LRO84_16055	COG0793	Belongs to the peptidase S41A family
LRO84_16070	COG2267	carboxylic ester hydrolase activity
LRO84_16080	COG1012	belongs to the aldehyde dehydrogenase family
LRO84_16085	COG3265	gluconokinase activity
LRO84_16095	COG0800	Aldolase
LRO84_16110	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LRO84_16115	COG0857	belongs to the CobB CobQ family
LRO84_16115	COG0280	phosphate acetyltransferase
LRO84_16120	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LRO84_16120	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LRO84_16140	COG0740	serine-type endopeptidase activity
LRO84_16150	COG4774	siderophore transport
LRO84_16160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LRO84_16170	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LRO84_16170	COG2813	Specifically methylates the guanine in position
LRO84_16270	COG0788	formyltetrahydrofolate deformylase activity
LRO84_16295	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LRO84_16295	COG4651	solute:proton antiporter activity
LRO84_16315	COG0724	RNA recognition motif
LRO84_16320	COG0210	DNA helicase
LRO84_16345	COG1733	regulation of RNA biosynthetic process
LRO84_16350	COG0604	alcohol dehydrogenase
LRO84_16355	COG2900	Belongs to the SlyX family
LRO84_16360	COG0488	(ABC) transporter
LRO84_16370	COG1560	Kdo2-lipid A biosynthetic process
LRO84_16380	COG1301	dicarboxylic acid transport
LRO84_16435	COG0473	3-isopropylmalate dehydrogenase activity
LRO84_16460	COG0583	DNA-binding transcription factor activity
LRO84_16505	COG0583	DNA-binding transcription factor activity
LRO84_16515	COG0625	glutathione transferase activity
LRO84_16520	COG2378	regulation of single-species biofilm formation
LRO84_16535	COG1530	ribonuclease E activity
LRO84_16540	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_16555	COG0583	DNA-binding transcription factor activity
LRO84_16560	COG4221	oxidoreductase activity
LRO84_16565	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LRO84_16575	COG0534	Mate efflux family protein
LRO84_16590	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LRO84_16620	COG0493	'glutamate synthase
LRO84_16630	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LRO84_16635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LRO84_16650	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LRO84_16660	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
LRO84_16660	COG0644	oxidoreductase
LRO84_16675	COG4535	Mg2 and Co2 transporter CorC
LRO84_16680	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LRO84_16685	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LRO84_16710	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LRO84_16720	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LRO84_16730	COG0484	heat shock protein binding
LRO84_16735	COG0789	Transcriptional regulator
LRO84_16740	COG0598	Magnesium transport protein CorA
LRO84_16745	COG1185	polyribonucleotide nucleotidyltransferase activity
LRO84_16755	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LRO84_16760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LRO84_16765	COG1074	ATP-dependent DNA helicase activity
LRO84_16770	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LRO84_16790	COG2226	methyltransferase
LRO84_16800	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LRO84_16810	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LRO84_16825	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LRO84_16825	COG2111	Na H antiporter
LRO84_16830	COG1006	Multisubunit Na H antiporter MnhC subunit
LRO84_16835	COG0651	ATP synthesis coupled electron transport
LRO84_16840	COG1863	multisubunit Na H antiporter MnhE subunit
LRO84_16845	COG2212	antiporter activity
LRO84_16850	COG1320	monovalent cation:proton antiporter activity
LRO84_16855	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LRO84_16865	COG0195	Participates in both transcription termination and antitermination
LRO84_16915	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LRO84_16920	COG0237	dephospho-CoA kinase activity
LRO84_16930	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LRO84_16945	COG0497	DNA recombination
LRO84_16955	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LRO84_16990	COG2169	Transcriptional regulator
LRO84_16990	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LRO84_17000	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LRO84_17070	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LRO84_17085	COG0326	Molecular chaperone. Has ATPase activity
LRO84_17100	COG2056	Na+-H+ antiporter family
LRO84_17135	COG0222	ribosome binding
LRO84_17140	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LRO84_17170	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LRO84_17200	COG0546	phosphoglycolate phosphatase activity
LRO84_17205	COG1716	ATPase activity
LRO84_17250	COG0181	hydroxymethylbilane synthase activity
LRO84_17260	COG3275	phosphorelay sensor kinase activity
LRO84_17280	COG1538	Outer membrane efflux protein
LRO84_17315	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LRO84_17320	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LRO84_17325	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LRO84_17330	COG0772	Belongs to the SEDS family
LRO84_17355	COG4974	Belongs to the 'phage' integrase family
LRO84_17360	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LRO84_17370	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LRO84_17380	COG2197	response regulator
LRO84_17395	COG0793	Belongs to the peptidase S41A family
LRO84_17400	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LRO84_17405	COG0795	lipopolysaccharide-transporting ATPase activity
LRO84_17445	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LRO84_17445	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LRO84_17455	COG0004	ammonium transporteR
LRO84_17460	COG0347	Belongs to the P(II) protein family
LRO84_17470	COG0606	chelatase, subunit chli
LRO84_17475	COG0431	NADPH-dependent FMN reductase
LRO84_17485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LRO84_17490	COG0235	Class ii aldolase
LRO84_17495	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LRO84_17510	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LRO84_17525	COG0318	PFAM AMP-dependent synthetase and ligase
LRO84_17535	COG0477	Major facilitator Superfamily
LRO84_17540	COG2860	membrane
LRO84_17550	COG1253	flavin adenine dinucleotide binding
LRO84_17560	COG2814	Major facilitator Superfamily
LRO84_17570	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LRO84_17575	COG0745	RESPONSE REGULATOR receiver
LRO84_17585	COG2205	protein histidine kinase activity
LRO84_17590	COG4452	Inner membrane protein CreD
LRO84_17630	COG0655	NAD(P)H dehydrogenase (quinone) activity
LRO84_17645	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LRO84_17725	COG0697	spore germination
LRO84_17730	COG1309	transcriptional regulator
LRO84_17745	COG0386	Belongs to the glutathione peroxidase family
LRO84_17755	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LRO84_17760	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LRO84_17765	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LRO84_17820	COG1280	lysine exporter protein (LysE YggA)
LRO84_17825	COG2837	iron assimilation
LRO84_17835	COG0281	malic enzyme
LRO84_17880	COG0519	Catalyzes the synthesis of GMP from XMP
LRO84_17880	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LRO84_17885	COG4399	Belongs to the UPF0754 family
LRO84_17890	COG2259	Doxx family
LRO84_17895	COG0586	Pfam SNARE associated Golgi protein
LRO84_17910	COG1192	Involved in chromosome partitioning
LRO84_17920	COG0271	Belongs to the BolA IbaG family
LRO84_17960	COG3321	synthase
LRO84_17960	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
LRO84_17960	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LRO84_17960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LRO84_17965	COG1960	acyl-CoA dehydrogenase activity
LRO84_17975	COG2197	response regulator
LRO84_17985	COG3916	Acyl-homoserine-lactone synthase
LRO84_17990	COG0477	Major facilitator Superfamily
LRO84_17995	COG1024	Enoyl-CoA hydratase
LRO84_18000	COG1024	Enoyl-CoA hydratase
LRO84_18005	COG1960	acyl-CoA dehydrogenase activity
LRO84_18010	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LRO84_18030	COG1113	amino acid transport
LRO84_18035	COG1113	amino acid transport
LRO84_18040	COG0251	oxidation-reduction process
LRO84_18080	COG0564	pseudouridine synthase activity
LRO84_18115	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
LRO84_18115	COG0644	oxidoreductase
LRO84_18150	COG1051	belongs to the nudix hydrolase family
LRO84_18185	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LRO84_18200	COG1802	Transcriptional regulator
LRO84_18205	COG1448	Aminotransferase
LRO84_18210	COG0277	FAD linked oxidase domain protein
LRO84_18220	COG2186	Transcriptional regulator
LRO84_18230	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LRO84_18240	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LRO84_18255	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LRO84_18260	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LRO84_18285	COG2244	polysaccharide biosynthetic process
LRO84_18290	COG2089	acid synthase
LRO84_18300	COG3980	spore coat polysaccharide biosynthesis protein
LRO84_18305	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_18310	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LRO84_18315	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LRO84_18320	COG1086	Polysaccharide biosynthesis protein
LRO84_18325	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LRO84_18355	COG0728	peptidoglycan biosynthetic process
LRO84_18360	COG3023	N-Acetylmuramoyl-L-alanine amidase
LRO84_18420	COG0546	phosphoglycolate phosphatase activity
LRO84_18425	COG1028	Short-chain dehydrogenase reductase Sdr
LRO84_18440	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LRO84_18440	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LRO84_18445	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LRO84_18450	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LRO84_18455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LRO84_18460	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LRO84_18465	COG1116	anion transmembrane transporter activity
LRO84_18470	COG1309	transcriptional regulator
LRO84_18475	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LRO84_18485	COG0196	riboflavin kinase activity
LRO84_18490	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LRO84_18500	COG1047	Peptidyl-prolyl cis-trans
LRO84_18540	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LRO84_18545	COG0657	acetylesterase activity
LRO84_18565	COG0583	DNA-binding transcription factor activity
LRO84_18595	COG2951	lytic endotransglycosylase activity
LRO84_18600	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LRO84_18620	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LRO84_18630	COG0671	phosphoesterase, PA-phosphatase related
LRO84_18635	COG0861	Integral membrane protein TerC family
LRO84_18645	COG0754	glutathionylspermidine amidase activity
LRO84_18655	COG0402	S-adenosylhomocysteine deaminase activity
LRO84_18675	COG1230	cation diffusion facilitator family transporter
LRO84_18690	COG0706	membrane insertase activity